Query 001152
Match_columns 1137
No_of_seqs 1060 out of 3989
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 13:38:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001152.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001152hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 7.6E-51 2.6E-55 467.2 25.7 261 798-1129 20-282 (350)
2 4fih_A Serine/threonine-protei 100.0 1.9E-50 6.5E-55 463.2 26.0 257 802-1132 74-332 (346)
3 3hyh_A Carbon catabolite-derep 100.0 1.1E-49 3.7E-54 444.1 26.9 258 800-1131 11-270 (275)
4 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.1E-50 2.1E-54 452.7 23.9 260 800-1130 30-297 (311)
5 3omv_A RAF proto-oncogene seri 100.0 2.7E-49 9.4E-54 447.5 28.6 267 799-1131 33-301 (307)
6 3fpq_A Serine/threonine-protei 100.0 1.7E-49 5.7E-54 446.0 25.3 258 803-1130 26-289 (290)
7 4fie_A Serine/threonine-protei 100.0 2.4E-49 8.2E-54 464.8 26.0 257 802-1132 151-409 (423)
8 4aoj_A High affinity nerve gro 100.0 8.9E-49 3E-53 448.1 28.1 265 800-1132 39-321 (329)
9 4asz_A BDNF/NT-3 growth factor 100.0 3.6E-49 1.2E-53 445.6 24.1 262 800-1129 11-288 (299)
10 4gt4_A Tyrosine-protein kinase 100.0 1.4E-48 4.9E-53 442.4 27.0 265 797-1128 21-304 (308)
11 3ubd_A Ribosomal protein S6 ki 100.0 2E-49 6.7E-54 447.9 17.2 256 800-1129 22-287 (304)
12 4g3f_A NF-kappa-beta-inducing 100.0 2.1E-48 7.2E-53 444.9 22.1 255 800-1127 56-313 (336)
13 4b99_A Mitogen-activated prote 100.0 2.9E-46 1E-50 437.8 26.7 292 802-1129 54-350 (398)
14 4ase_A Vascular endothelial gr 100.0 1.3E-46 4.5E-51 433.9 22.7 263 801-1129 63-346 (353)
15 3hmm_A TGF-beta receptor type- 100.0 4.4E-46 1.5E-50 421.3 25.7 267 803-1129 4-296 (303)
16 4g31_A Eukaryotic translation 100.0 2.9E-46 1E-50 421.9 23.3 277 802-1130 5-286 (299)
17 3uto_A Twitchin; kinase, muscl 100.0 3.6E-44 1.2E-48 439.0 26.7 261 801-1131 156-418 (573)
18 4f9c_A Cell division cycle 7-r 100.0 4.3E-44 1.5E-48 414.6 23.9 286 802-1129 21-358 (361)
19 3v5w_A G-protein coupled recep 100.0 4.1E-44 1.4E-48 438.6 23.0 261 798-1129 185-455 (689)
20 3fe3_A MAP/microtubule affinit 100.0 2.4E-41 8.3E-46 386.3 26.6 258 799-1130 12-271 (328)
21 3fxz_A Serine/threonine-protei 100.0 2E-41 6.9E-46 380.5 25.2 259 801-1133 19-279 (297)
22 1tki_A Titin; serine kinase, m 100.0 7.9E-41 2.7E-45 380.5 26.3 259 801-1130 4-264 (321)
23 3zgw_A Maternal embryonic leuc 100.0 7.8E-41 2.7E-45 385.4 25.7 257 801-1130 9-267 (347)
24 2yab_A Death-associated protei 100.0 8.6E-41 2.9E-45 387.0 25.7 265 802-1129 12-278 (361)
25 1o6l_A RAC-beta serine/threoni 100.0 2E-40 6.9E-45 380.3 27.1 257 800-1129 3-266 (337)
26 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.7E-41 3.3E-45 385.3 24.5 259 798-1129 19-286 (353)
27 2bdw_A Hypothetical protein K1 100.0 4.2E-40 1.4E-44 381.0 27.5 260 802-1129 29-290 (362)
28 3niz_A Rhodanese family protei 100.0 3.1E-40 1.1E-44 373.3 25.8 288 799-1131 18-308 (311)
29 1fot_A TPK1 delta, CAMP-depend 100.0 4.3E-40 1.5E-44 374.4 27.1 255 799-1129 3-264 (318)
30 3fdn_A Serine/threonine-protei 100.0 6.2E-40 2.1E-44 363.4 26.7 258 799-1131 6-265 (279)
31 3p86_A Serine/threonine-protei 100.0 5.4E-40 1.9E-44 371.4 26.7 261 800-1130 35-298 (309)
32 2y0a_A Death-associated protei 100.0 4.6E-40 1.6E-44 374.6 26.2 264 802-1130 11-278 (326)
33 3a62_A Ribosomal protein S6 ki 100.0 4.6E-40 1.6E-44 374.8 25.9 260 798-1129 13-282 (327)
34 3soa_A Calcium/calmodulin-depe 100.0 7.8E-40 2.7E-44 389.1 28.5 261 802-1129 11-273 (444)
35 3c0i_A Peripheral plasma membr 100.0 8.7E-40 3E-44 376.3 27.8 266 802-1129 24-292 (351)
36 3o0g_A Cell division protein k 100.0 9.4E-40 3.2E-44 364.6 26.9 285 801-1130 1-289 (292)
37 1ob3_A PFPK5, cell division co 100.0 4.6E-40 1.6E-44 366.7 24.0 282 801-1129 1-286 (288)
38 2c30_A Serine/threonine-protei 100.0 9.3E-40 3.2E-44 371.3 26.5 255 803-1131 46-302 (321)
39 3kk8_A Calcium/calmodulin depe 100.0 1.6E-39 5.3E-44 360.3 27.6 265 801-1133 5-271 (284)
40 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.6E-40 2.6E-44 377.4 26.0 255 799-1129 38-299 (350)
41 2zv2_A Calcium/calmodulin-depe 100.0 4E-40 1.4E-44 368.7 22.3 268 799-1128 10-297 (298)
42 1xjd_A Protein kinase C, theta 100.0 4.7E-40 1.6E-44 378.5 23.4 258 799-1129 14-275 (345)
43 3a8x_A Protein kinase C IOTA t 100.0 2E-39 7E-44 372.9 27.9 260 797-1129 4-281 (345)
44 2psq_A Fibroblast growth facto 100.0 1.6E-39 5.4E-44 377.2 27.0 262 801-1129 80-363 (370)
45 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.5E-40 5.2E-45 381.2 18.3 259 798-1130 5-265 (336)
46 3f3z_A Calcium/calmodulin-depe 100.0 2E-39 6.7E-44 358.6 26.1 263 802-1135 9-273 (277)
47 2eue_A Carbon catabolite derep 100.0 8.8E-40 3E-44 361.3 23.2 259 798-1130 9-269 (275)
48 4agu_A Cyclin-dependent kinase 100.0 2E-39 6.9E-44 364.6 26.5 285 801-1130 2-291 (311)
49 3kul_A Ephrin type-A receptor 100.0 1.6E-39 5.3E-44 370.1 25.9 264 800-1133 47-316 (325)
50 4eqm_A Protein kinase; transfe 100.0 4.2E-39 1.4E-43 360.9 29.0 263 801-1130 10-275 (294)
51 2i0e_A Protein kinase C-beta I 100.0 1.9E-39 6.5E-44 374.6 26.9 259 798-1129 16-282 (353)
52 3tki_A Serine/threonine-protei 100.0 6.1E-40 2.1E-44 373.3 22.4 260 800-1129 5-267 (323)
53 3soc_A Activin receptor type-2 100.0 1.6E-39 5.4E-44 369.1 25.6 283 801-1129 23-317 (322)
54 3dtc_A Mitogen-activated prote 100.0 1.4E-39 4.6E-44 358.3 24.3 261 800-1127 5-270 (271)
55 2y7j_A Phosphorylase B kinase 100.0 4.4E-39 1.5E-43 372.6 29.7 266 802-1128 94-364 (365)
56 2pmi_A Negative RE, cyclin-dep 100.0 2.7E-39 9.3E-44 366.3 27.2 288 800-1130 3-300 (317)
57 4dc2_A Protein kinase C IOTA t 100.0 1.6E-39 5.5E-44 380.8 25.5 258 799-1129 49-324 (396)
58 3is5_A Calcium-dependent prote 100.0 3.8E-39 1.3E-43 359.1 27.3 261 802-1129 22-284 (285)
59 1kob_A Twitchin; kinase, intra 100.0 1.8E-39 6E-44 379.5 25.6 260 801-1130 50-311 (387)
60 3v8s_A RHO-associated protein 100.0 1.1E-39 3.7E-44 384.0 23.6 265 800-1130 67-336 (410)
61 3llt_A Serine/threonine kinase 100.0 3.7E-39 1.3E-43 370.6 27.5 283 802-1128 35-360 (360)
62 3lb7_A RAF proto-oncogene seri 100.0 4.3E-39 1.5E-43 363.5 27.4 268 799-1132 33-302 (307)
63 3hko_A Calcium/calmodulin-depe 100.0 1.9E-39 6.5E-44 370.1 24.5 275 802-1131 26-338 (345)
64 4hcu_A Tyrosine-protein kinase 100.0 3E-39 1E-43 355.9 25.0 256 801-1130 9-266 (269)
65 4fr4_A YANK1, serine/threonine 100.0 3.2E-39 1.1E-43 376.9 26.3 261 798-1129 11-277 (384)
66 3g33_A Cell division protein k 100.0 2.4E-39 8.4E-44 364.1 24.5 291 801-1130 8-303 (308)
67 3gni_B Strad alpha; kinase fol 100.0 2.4E-39 8.2E-44 376.9 25.2 296 800-1130 23-340 (389)
68 2vgo_A Serine/threonine-protei 100.0 6E-39 2.1E-43 356.3 26.5 257 799-1130 11-269 (284)
69 1luf_A Muscle-specific tyrosin 100.0 4E-39 1.4E-43 366.8 25.5 266 800-1132 45-337 (343)
70 2x4f_A Myosin light chain kina 100.0 5E-39 1.7E-43 373.5 26.9 255 805-1129 92-348 (373)
71 2qr7_A Ribosomal protein S6 ki 100.0 3E-39 1E-43 371.1 24.6 256 802-1129 22-283 (342)
72 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3E-39 1E-43 367.9 24.4 291 798-1131 30-326 (329)
73 3ttj_A Mitogen-activated prote 100.0 3.9E-39 1.3E-43 385.3 26.5 284 801-1129 61-361 (464)
74 2a2a_A Death-associated protei 100.0 5.1E-39 1.7E-43 364.2 25.9 265 802-1129 12-278 (321)
75 3q5i_A Protein kinase; CDPK, m 100.0 7.5E-39 2.6E-43 386.2 28.7 269 801-1132 35-310 (504)
76 3ork_A Serine/threonine protei 100.0 2.8E-39 9.6E-44 364.7 23.3 267 801-1129 11-279 (311)
77 1ua2_A CAK, cell division prot 100.0 2.3E-39 7.8E-44 371.4 22.9 290 800-1131 8-299 (346)
78 3l9p_A Anaplastic lymphoma kin 100.0 3.9E-39 1.3E-43 373.2 24.7 268 798-1129 67-344 (367)
79 3oz6_A Mitogen-activated prote 100.0 3.9E-39 1.3E-43 375.2 24.8 294 801-1129 8-334 (388)
80 2r5t_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 374.6 24.8 259 798-1129 34-299 (373)
81 2y94_A 5'-AMP-activated protei 100.0 4.7E-39 1.6E-43 385.5 26.0 260 798-1130 12-273 (476)
82 3kmu_A ILK, integrin-linked ki 100.0 5E-39 1.7E-43 352.6 24.1 261 798-1129 6-269 (271)
83 1t4h_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 356.7 25.8 258 802-1130 26-289 (290)
84 4euu_A Serine/threonine-protei 100.0 1E-38 3.4E-43 361.2 27.2 294 802-1133 9-312 (319)
85 4ejn_A RAC-alpha serine/threon 100.0 2.1E-39 7.3E-44 385.0 22.6 258 799-1129 145-410 (446)
86 3kn6_A Ribosomal protein S6 ki 100.0 4.1E-39 1.4E-43 366.8 23.8 259 803-1133 9-280 (325)
87 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.8E-39 2.3E-43 352.5 24.7 256 801-1130 7-264 (268)
88 3lij_A Calcium/calmodulin depe 100.0 6.8E-39 2.3E-43 385.7 26.7 259 802-1129 37-297 (494)
89 2w5a_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 356.6 22.2 265 800-1131 4-275 (279)
90 3mtl_A Cell division protein k 100.0 2.3E-39 7.9E-44 368.1 21.2 284 801-1130 1-288 (324)
91 1cm8_A Phosphorylated MAP kina 100.0 7.8E-39 2.7E-43 370.9 25.6 285 802-1130 25-314 (367)
92 3mwu_A Calmodulin-domain prote 100.0 5.3E-39 1.8E-43 385.7 25.0 263 802-1133 22-286 (486)
93 3qd2_B Eukaryotic translation 100.0 5.1E-39 1.7E-43 363.1 23.3 280 801-1129 5-331 (332)
94 4aaa_A Cyclin-dependent kinase 100.0 4.3E-39 1.5E-43 366.3 22.8 290 796-1130 19-313 (331)
95 3bhy_A Death-associated protei 100.0 1.3E-38 4.3E-43 352.8 25.9 265 802-1129 5-271 (283)
96 2h6d_A 5'-AMP-activated protei 100.0 1.4E-38 4.6E-43 351.3 25.7 260 800-1132 9-270 (276)
97 2rku_A Serine/threonine-protei 100.0 1.8E-38 6.2E-43 354.3 27.0 261 797-1130 10-272 (294)
98 3mi9_A Cell division protein k 100.0 1.3E-38 4.3E-43 365.2 26.2 301 799-1132 14-320 (351)
99 3nyv_A Calmodulin-domain prote 100.0 5.1E-39 1.7E-43 385.3 23.9 261 802-1130 26-288 (484)
100 1u5q_A Serine/threonine protei 100.0 1.9E-38 6.5E-43 365.2 27.5 259 802-1132 54-314 (348)
101 3i6u_A CDS1, serine/threonine- 100.0 3.5E-39 1.2E-43 380.5 21.8 268 802-1129 135-405 (419)
102 2wtk_C Serine/threonine-protei 100.0 1.2E-38 4E-43 357.0 24.8 266 801-1131 4-271 (305)
103 3gen_A Tyrosine-protein kinase 100.0 1.1E-38 3.6E-43 353.8 24.2 255 800-1128 22-278 (283)
104 3q4u_A Activin receptor type-1 100.0 1.5E-38 5.2E-43 355.0 25.6 266 801-1128 7-300 (301)
105 3tt0_A Basic fibroblast growth 100.0 1.8E-38 6.2E-43 369.3 27.2 262 801-1129 68-351 (382)
106 2ivs_A Proto-oncogene tyrosine 100.0 1E-38 3.6E-43 358.5 24.4 261 801-1128 22-309 (314)
107 3cbl_A C-FES, proto-oncogene t 100.0 4.5E-39 1.6E-43 373.9 22.0 257 801-1128 113-372 (377)
108 2w4o_A Calcium/calmodulin-depe 100.0 6.5E-39 2.2E-43 368.9 23.1 259 802-1132 53-314 (349)
109 3uc3_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 366.9 27.0 258 800-1130 18-281 (361)
110 4aw2_A Serine/threonine-protei 100.0 7.7E-39 2.6E-43 379.7 24.3 267 801-1130 73-345 (437)
111 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-38 4.5E-43 351.6 24.4 263 801-1131 10-287 (289)
112 3cok_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 357.1 19.4 262 800-1133 9-272 (278)
113 3fme_A Dual specificity mitoge 100.0 1.3E-38 4.3E-43 353.7 24.3 265 800-1130 5-273 (290)
114 3eqc_A Dual specificity mitoge 100.0 1.5E-38 5.1E-43 365.9 25.1 279 799-1129 30-330 (360)
115 3eb0_A Putative uncharacterize 100.0 1.5E-38 5.3E-43 369.8 25.5 294 801-1129 6-327 (383)
116 3rp9_A Mitogen-activated prote 100.0 1.8E-38 6.1E-43 378.0 26.5 298 802-1130 53-403 (458)
117 3poz_A Epidermal growth factor 100.0 1.2E-38 4E-43 362.7 23.7 257 800-1128 13-276 (327)
118 1mp8_A Focal adhesion kinase 1 100.0 1.5E-38 5.1E-43 352.9 24.0 256 800-1128 13-274 (281)
119 3kex_A Receptor tyrosine-prote 100.0 1.5E-38 5.2E-43 361.2 24.5 258 800-1129 11-275 (325)
120 3ugc_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 355.9 23.3 276 801-1129 9-290 (295)
121 3vhe_A Vascular endothelial gr 100.0 1E-38 3.4E-43 366.2 23.2 263 801-1129 21-354 (359)
122 3qup_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 360.5 23.5 267 801-1127 22-295 (323)
123 2vd5_A DMPK protein; serine/th 100.0 1.6E-38 5.4E-43 374.4 25.4 267 800-1130 59-334 (412)
124 2jam_A Calcium/calmodulin-depe 100.0 2.7E-38 9.4E-43 354.8 25.9 259 802-1131 9-269 (304)
125 3a7i_A MST3 kinase, serine/thr 100.0 2.2E-38 7.5E-43 355.1 25.0 256 801-1131 21-278 (303)
126 2owb_A Serine/threonine-protei 100.0 3.4E-38 1.1E-42 360.1 26.9 261 797-1130 36-298 (335)
127 3p1a_A MYT1 kinase, membrane-a 100.0 3.3E-38 1.1E-42 356.5 26.2 251 802-1129 57-310 (311)
128 2xrw_A Mitogen-activated prote 100.0 6.1E-38 2.1E-42 363.5 29.0 285 801-1129 24-324 (371)
129 1phk_A Phosphorylase kinase; g 100.0 6.7E-38 2.3E-42 349.7 28.2 273 799-1132 14-292 (298)
130 2ac3_A MAP kinase-interacting 100.0 2.7E-38 9.4E-43 356.1 25.3 274 801-1132 11-304 (316)
131 3dbq_A Dual specificity protei 100.0 2.9E-38 9.9E-43 361.8 25.4 260 802-1130 9-280 (343)
132 1k9a_A Carboxyl-terminal SRC k 100.0 2.7E-38 9.4E-43 376.2 26.2 254 800-1130 191-445 (450)
133 3an0_A Dual specificity mitoge 100.0 4.7E-38 1.6E-42 358.6 26.5 268 798-1132 47-319 (340)
134 2r3i_A Cell division protein k 100.0 5.8E-38 2E-42 350.3 26.7 281 801-1130 2-290 (299)
135 3og7_A AKAP9-BRAF fusion prote 100.0 3.4E-38 1.2E-42 351.8 24.8 265 800-1129 22-287 (289)
136 1nxk_A MAP kinase-activated pr 100.0 1.5E-38 5.1E-43 373.0 22.9 262 801-1131 60-329 (400)
137 1j1b_A Glycogen synthase kinas 100.0 2.8E-38 9.4E-43 373.0 25.2 284 802-1129 54-342 (420)
138 3t9t_A Tyrosine-protein kinase 100.0 4.8E-38 1.6E-42 344.8 24.9 256 801-1130 7-264 (267)
139 2acx_A G protein-coupled recep 100.0 2.5E-38 8.7E-43 385.6 25.1 259 799-1129 181-450 (576)
140 1u59_A Tyrosine-protein kinase 100.0 7.5E-38 2.6E-42 348.4 26.7 256 802-1128 9-270 (287)
141 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-38 4.4E-43 367.1 21.2 263 798-1129 50-327 (355)
142 4f0f_A Serine/threonine-protei 100.0 6.4E-38 2.2E-42 348.3 25.9 267 796-1127 13-286 (287)
143 2qol_A Ephrin receptor; recept 100.0 1.7E-38 5.9E-43 369.0 22.1 259 800-1128 43-307 (373)
144 4e7w_A Glycogen synthase kinas 100.0 3.2E-38 1.1E-42 369.2 24.6 285 802-1129 40-327 (394)
145 3n9x_A Phosphotransferase; mal 100.0 5.8E-38 2E-42 371.4 26.8 298 801-1130 25-368 (432)
146 2i6l_A Mitogen-activated prote 100.0 9.9E-38 3.4E-42 350.7 27.4 301 802-1133 11-315 (320)
147 3pfq_A PKC-B, PKC-beta, protei 100.0 4.2E-38 1.4E-42 392.7 26.8 259 798-1129 337-603 (674)
148 3kvw_A DYRK2, dual specificity 100.0 4.1E-38 1.4E-42 372.6 25.3 281 802-1131 97-416 (429)
149 2nru_A Interleukin-1 receptor- 100.0 2.1E-38 7E-43 355.7 21.6 270 804-1130 33-306 (307)
150 2ycf_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43 358.8 22.0 267 802-1128 10-279 (322)
151 1mqb_A Ephrin type-A receptor 100.0 1.3E-37 4.6E-42 355.1 28.6 260 799-1128 41-307 (333)
152 2x7f_A TRAF2 and NCK-interacti 100.0 4.1E-38 1.4E-42 356.3 23.9 269 800-1131 22-294 (326)
153 1fvr_A Tyrosine-protein kinase 100.0 5.7E-38 2E-42 356.2 25.1 264 795-1128 18-298 (327)
154 4fvq_A Tyrosine-protein kinase 100.0 3.4E-38 1.1E-42 350.5 22.7 263 800-1134 6-279 (289)
155 2fst_X Mitogen-activated prote 100.0 2.4E-38 8.3E-43 367.0 21.8 284 802-1129 29-317 (367)
156 3s95_A LIMK-1, LIM domain kina 100.0 1.7E-37 5.7E-42 349.4 28.0 266 801-1128 9-280 (310)
157 3cc6_A Protein tyrosine kinase 100.0 7.3E-38 2.5E-42 347.1 24.6 256 800-1128 10-271 (281)
158 3com_A Serine/threonine-protei 100.0 1.1E-37 3.9E-42 350.8 26.4 259 799-1131 26-286 (314)
159 3lzb_A Epidermal growth factor 100.0 5.8E-38 2E-42 357.4 24.3 261 799-1129 12-277 (327)
160 1p4o_A Insulin-like growth fac 100.0 7.4E-38 2.5E-42 353.5 24.9 262 801-1129 24-298 (322)
161 2izr_A Casein kinase I isoform 100.0 1.7E-37 5.8E-42 353.0 28.0 264 802-1127 9-278 (330)
162 2zmd_A Dual specificity protei 100.0 7.1E-38 2.4E-42 365.9 25.4 260 802-1130 56-327 (390)
163 3qyz_A Mitogen-activated prote 100.0 1.2E-37 4.1E-42 359.7 27.0 289 802-1130 27-320 (364)
164 2yex_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 347.9 21.3 262 801-1132 6-270 (276)
165 3nsz_A CK II alpha, casein kin 100.0 1.4E-37 4.9E-42 352.4 27.1 277 799-1130 33-326 (330)
166 3lm5_A Serine/threonine-protei 100.0 3E-38 1E-42 359.3 21.4 261 803-1129 29-293 (327)
167 2j7t_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 352.7 21.5 263 801-1131 18-283 (302)
168 2eva_A TAK1 kinase - TAB1 chim 100.0 7.9E-38 2.7E-42 352.7 24.6 253 799-1129 5-262 (307)
169 1qcf_A Haematopoetic cell kina 100.0 4.1E-38 1.4E-42 375.0 23.5 257 801-1131 187-445 (454)
170 1t46_A HOMO sapiens V-KIT hard 100.0 6.8E-38 2.3E-42 351.7 23.8 263 801-1130 22-307 (313)
171 1rjb_A FL cytokine receptor; k 100.0 4.9E-38 1.7E-42 358.7 22.9 264 800-1130 43-334 (344)
172 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.4E-38 2.9E-42 379.6 26.1 262 799-1129 182-454 (543)
173 2b9h_A MAP kinase FUS3, mitoge 100.0 2.2E-37 7.7E-42 354.1 28.2 297 801-1130 10-312 (353)
174 1z57_A Dual specificity protei 100.0 1.9E-37 6.5E-42 350.8 27.2 285 801-1129 13-334 (339)
175 3f66_A Hepatocyte growth facto 100.0 1.2E-37 4E-42 348.1 25.0 264 801-1130 24-291 (298)
176 2wqm_A Serine/threonine-protei 100.0 1.7E-37 5.9E-42 349.0 26.6 267 797-1130 27-297 (310)
177 2pvf_A Fibroblast growth facto 100.0 1.1E-37 3.7E-42 355.3 25.2 261 801-1128 34-316 (334)
178 3e3p_A Protein kinase, putativ 100.0 1.3E-37 4.5E-42 357.0 26.0 293 799-1130 20-321 (360)
179 2yfx_A Tyrosine-protein kinase 100.0 7.7E-38 2.6E-42 355.1 23.6 270 796-1129 24-303 (327)
180 3dls_A PAS domain-containing s 100.0 1.9E-38 6.6E-43 362.9 18.6 255 802-1130 24-281 (335)
181 3mdy_A Bone morphogenetic prot 100.0 3E-37 1E-41 350.1 28.3 267 802-1130 37-331 (337)
182 1csn_A Casein kinase-1; phosph 100.0 3.5E-37 1.2E-41 343.4 28.4 267 801-1128 9-281 (298)
183 2qkw_B Protein kinase; three-h 100.0 2.1E-38 7.1E-43 358.9 18.3 278 800-1130 37-315 (321)
184 3kfa_A Tyrosine-protein kinase 100.0 9.6E-38 3.3E-42 346.7 23.2 256 800-1128 11-269 (288)
185 2vwi_A Serine/threonine-protei 100.0 1.3E-38 4.5E-43 355.4 16.3 277 800-1130 13-294 (303)
186 1byg_A CSK, protein (C-termina 100.0 4.2E-38 1.5E-42 348.4 20.1 253 800-1129 19-272 (278)
187 2wei_A Calmodulin-domain prote 100.0 9.9E-38 3.4E-42 347.4 23.1 262 802-1132 22-285 (287)
188 1xbb_A Tyrosine-protein kinase 100.0 2.5E-37 8.4E-42 344.9 26.0 257 801-1128 15-277 (291)
189 4e5w_A Tyrosine-protein kinase 100.0 2.9E-37 9.8E-42 345.2 25.8 280 796-1128 13-300 (302)
190 3brb_A Proto-oncogene tyrosine 100.0 2.6E-37 9E-42 348.0 25.6 267 801-1128 33-306 (313)
191 3byv_A Rhoptry kinase; malaria 100.0 6.2E-39 2.1E-43 372.3 12.3 270 801-1129 72-365 (377)
192 1blx_A Cyclin-dependent kinase 100.0 3.2E-37 1.1E-41 348.6 26.0 287 802-1130 11-303 (326)
193 1wak_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 358.8 25.2 285 801-1128 36-396 (397)
194 2i1m_A Macrophage colony-stimu 100.0 1.9E-37 6.3E-42 352.3 24.0 262 800-1128 44-324 (333)
195 3lxl_A Tyrosine-protein kinase 100.0 1.7E-37 5.9E-42 352.2 23.6 275 801-1129 22-302 (327)
196 3pls_A Macrophage-stimulating 100.0 3.7E-37 1.3E-41 343.3 25.8 259 803-1129 22-286 (298)
197 3pg1_A Mitogen-activated prote 100.0 2.2E-37 7.4E-42 356.1 24.4 295 801-1130 21-323 (362)
198 2xir_A Vascular endothelial gr 100.0 1.6E-37 5.5E-42 349.1 22.5 263 801-1129 26-309 (316)
199 1opk_A P150, C-ABL, proto-onco 100.0 2.4E-37 8.2E-42 372.6 25.6 256 801-1129 219-477 (495)
200 3uim_A Brassinosteroid insensi 100.0 1.8E-37 6.1E-42 351.3 23.0 273 801-1129 29-310 (326)
201 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.4E-37 4.8E-42 370.4 23.1 256 801-1130 183-440 (452)
202 3c1x_A Hepatocyte growth facto 100.0 1.4E-37 4.7E-42 361.6 22.5 263 802-1130 89-355 (373)
203 4exu_A Mitogen-activated prote 100.0 2.4E-37 8.3E-42 358.4 24.2 283 802-1129 42-329 (371)
204 2a19_B Interferon-induced, dou 100.0 3.6E-37 1.2E-41 340.6 24.4 262 802-1132 11-276 (284)
205 1qpc_A LCK kinase; alpha beta 100.0 2.1E-37 7.1E-42 342.7 22.4 254 801-1128 12-267 (279)
206 3rgf_A Cyclin-dependent kinase 100.0 2.5E-37 8.4E-42 362.4 23.5 291 804-1131 22-341 (405)
207 3op5_A Serine/threonine-protei 100.0 3.9E-37 1.3E-41 355.3 24.7 282 801-1128 34-327 (364)
208 2h34_A Serine/threonine-protei 100.0 3.7E-37 1.3E-41 347.3 23.6 264 798-1130 30-296 (309)
209 2clq_A Mitogen-activated prote 100.0 3.8E-37 1.3E-41 342.6 23.3 260 802-1131 22-286 (295)
210 3g2f_A Bone morphogenetic prot 100.0 4.6E-37 1.6E-41 349.2 24.4 291 798-1129 9-317 (336)
211 2pml_X PFPK7, Ser/Thr protein 100.0 6.2E-38 2.1E-42 358.0 17.3 283 800-1130 29-329 (348)
212 3lxp_A Non-receptor tyrosine-p 100.0 4.3E-37 1.5E-41 348.2 23.8 269 804-1128 33-308 (318)
213 1u46_A ACK-1, activated CDC42 100.0 3.1E-37 1.1E-41 342.7 21.8 263 801-1131 17-285 (291)
214 1b6c_B TGF-B superfamily recep 100.0 1.4E-36 4.9E-41 345.6 27.5 267 802-1130 42-336 (342)
215 2vx3_A Dual specificity tyrosi 100.0 9.3E-37 3.2E-41 354.7 26.2 281 801-1130 53-379 (382)
216 2eu9_A Dual specificity protei 100.0 1.6E-36 5.3E-41 345.9 27.5 286 801-1130 18-340 (355)
217 1zy4_A Serine/threonine-protei 100.0 5.3E-37 1.8E-41 341.6 22.9 278 802-1130 6-290 (303)
218 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-37 4.3E-42 350.9 17.2 269 798-1130 29-302 (319)
219 4eut_A Serine/threonine-protei 100.0 9.2E-37 3.1E-41 356.8 24.4 289 802-1128 9-307 (396)
220 3coi_A Mitogen-activated prote 100.0 5.8E-37 2E-41 351.9 22.1 283 802-1129 24-311 (353)
221 2h8h_A Proto-oncogene tyrosine 100.0 5.2E-37 1.8E-41 373.2 22.6 256 801-1130 266-523 (535)
222 4fl3_A Tyrosine-protein kinase 100.0 9.8E-37 3.4E-41 377.8 25.4 249 808-1127 375-628 (635)
223 3gxj_A TGF-beta receptor type- 100.0 1.1E-38 3.8E-43 356.1 7.0 268 802-1131 3-298 (303)
224 2ozo_A Tyrosine-protein kinase 100.0 1.5E-36 5.3E-41 374.8 26.6 255 802-1127 335-595 (613)
225 1q8y_A SR protein kinase; tran 100.0 1.6E-36 5.5E-41 349.3 25.0 287 800-1130 17-340 (373)
226 4hgt_A Casein kinase I isoform 100.0 2.8E-36 9.7E-41 335.4 25.8 263 801-1128 8-278 (296)
227 2v62_A Serine/threonine-protei 100.0 6.5E-37 2.2E-41 350.9 20.7 281 801-1129 36-327 (345)
228 3uzp_A CKI-delta, CKID, casein 100.0 3.5E-36 1.2E-40 335.0 25.8 266 801-1128 8-278 (296)
229 3aln_A Dual specificity mitoge 100.0 4.7E-37 1.6E-41 348.4 18.9 267 800-1129 20-291 (327)
230 2buj_A Serine/threonine-protei 100.0 2.5E-36 8.5E-41 340.3 23.8 278 801-1133 28-309 (317)
231 3cek_A Dual specificity protei 100.0 2.9E-36 9.8E-41 339.8 24.3 261 802-1131 28-300 (313)
232 2dyl_A Dual specificity mitoge 100.0 2.1E-36 7.3E-41 340.3 22.6 263 799-1129 22-289 (318)
233 2jii_A Serine/threonine-protei 100.0 2E-36 6.9E-41 347.6 22.3 266 801-1129 41-335 (352)
234 3ll6_A Cyclin G-associated kin 100.0 2.3E-36 7.8E-41 342.1 22.4 273 802-1129 28-307 (337)
235 3fhr_A MAP kinase-activated pr 100.0 1.1E-36 3.9E-41 348.1 19.9 265 801-1130 27-294 (336)
236 2w1i_A JAK2; chromosomal rearr 100.0 4E-36 1.4E-40 341.1 23.7 275 801-1129 40-321 (326)
237 3q60_A ROP5B; pseudokinase, tr 100.0 1.3E-36 4.4E-41 351.9 19.6 277 802-1129 62-358 (371)
238 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.6E-36 8.8E-41 348.4 20.9 256 802-1126 65-335 (365)
239 2iwi_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 339.0 20.2 253 801-1130 30-290 (312)
240 3a99_A Proto-oncogene serine/t 100.0 2.2E-36 7.7E-41 342.9 19.0 253 801-1130 42-300 (320)
241 2j0j_A Focal adhesion kinase 1 100.0 1.2E-35 4.1E-40 369.4 26.0 255 801-1128 389-649 (656)
242 3p23_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 356.9 18.1 261 803-1128 25-288 (432)
243 2rio_A Serine/threonine-protei 100.0 1.5E-35 5E-40 351.2 21.4 271 803-1128 16-300 (434)
244 3sv0_A Casein kinase I-like; t 100.0 1.1E-34 3.9E-39 348.1 27.9 265 801-1128 6-276 (483)
245 3m2w_A MAP kinase-activated pr 100.0 1.8E-34 6E-39 323.7 21.2 244 800-1130 15-263 (299)
246 2vuw_A Serine/threonine-protei 100.0 9E-36 3.1E-40 339.7 7.8 271 801-1128 19-336 (336)
247 3qa8_A MGC80376 protein; kinas 100.0 4.2E-35 1.5E-39 361.2 11.0 292 797-1128 9-302 (676)
248 3dzo_A Rhoptry kinase domain; 100.0 1.6E-34 5.6E-39 340.0 14.4 269 801-1128 77-368 (413)
249 3uqc_A Probable conserved tran 100.0 1.7E-33 5.8E-38 315.1 19.1 233 802-1130 31-265 (286)
250 2pzi_A Probable serine/threoni 100.0 1.6E-33 5.6E-38 351.9 18.7 242 802-1127 80-324 (681)
251 3rgz_A Protein brassinosteroid 100.0 9.4E-33 3.2E-37 349.6 22.2 289 19-325 370-741 (768)
252 3rgz_A Protein brassinosteroid 100.0 5E-30 1.7E-34 324.6 22.6 254 17-278 394-723 (768)
253 1xku_A Decorin; proteoglycan, 100.0 3.5E-28 1.2E-32 276.3 27.8 244 17-271 52-307 (330)
254 2z66_A Variable lymphocyte rec 100.0 9.2E-29 3.2E-33 277.8 20.9 254 20-282 10-273 (306)
255 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-29 4.1E-34 287.4 13.3 224 41-271 50-282 (313)
256 1ogq_A PGIP-2, polygalacturona 100.0 3.3E-29 1.1E-33 283.7 16.9 247 17-271 50-305 (313)
257 2id5_A Lingo-1, leucine rich r 100.0 3E-28 1E-32 290.6 25.8 250 16-271 31-286 (477)
258 3v47_A TOLL-like receptor 5B a 100.0 3.5E-28 1.2E-32 287.5 26.1 253 16-271 29-385 (455)
259 2ft3_A Biglycan; proteoglycan, 100.0 5E-28 1.7E-32 275.4 23.9 240 19-271 35-278 (332)
260 3zyj_A Leucine-rich repeat-con 100.0 2E-27 6.9E-32 281.2 27.5 253 19-281 45-303 (440)
261 4eco_A Uncharacterized protein 100.0 6.8E-29 2.3E-33 307.9 14.7 263 18-289 82-470 (636)
262 3o6n_A APL1; leucine-rich repe 100.0 1.4E-27 4.9E-32 277.5 24.7 284 18-325 70-375 (390)
263 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-27 5.1E-32 292.7 25.8 128 18-148 33-164 (606)
264 3oja_B Anopheles plasmodium-re 100.0 1.7E-27 6E-32 292.9 25.8 280 18-326 76-382 (597)
265 3zyi_A Leucine-rich repeat-con 100.0 2.1E-27 7.1E-32 282.1 25.5 252 19-280 56-313 (452)
266 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.4E-27 4.8E-32 291.2 23.7 299 17-325 52-511 (562)
267 4fcg_A Uncharacterized protein 100.0 1.1E-27 3.7E-32 273.3 21.2 224 40-271 80-315 (328)
268 2z81_A CD282 antigen, TOLL-lik 100.0 9.4E-28 3.2E-32 290.7 21.9 303 17-325 26-511 (549)
269 2z7x_B TOLL-like receptor 1, v 100.0 7.1E-28 2.4E-32 290.3 20.4 301 17-325 21-482 (520)
270 4eco_A Uncharacterized protein 100.0 3E-28 1E-32 302.1 17.2 246 17-270 206-501 (636)
271 2id5_A Lingo-1, leucine rich r 100.0 1.6E-27 5.4E-32 284.4 22.7 249 17-271 56-310 (477)
272 4ecn_A Leucine-rich repeat pro 100.0 1.2E-27 4E-32 304.8 22.5 249 17-271 491-767 (876)
273 4g8a_A TOLL-like receptor 4; l 100.0 5.1E-27 1.8E-31 287.4 27.5 131 16-149 51-185 (635)
274 3t6q_A CD180 antigen; protein- 100.0 4.3E-27 1.5E-31 288.6 26.1 267 16-288 32-362 (606)
275 4ecn_A Leucine-rich repeat pro 99.9 2.2E-27 7.4E-32 302.3 23.0 266 17-290 448-767 (876)
276 1xku_A Decorin; proteoglycan, 99.9 2E-26 6.7E-31 261.9 27.8 242 18-271 32-277 (330)
277 2ft3_A Biglycan; proteoglycan, 99.9 9.8E-27 3.4E-31 264.8 24.1 252 16-279 53-316 (332)
278 2z63_A TOLL-like receptor 4, v 99.9 6.3E-27 2.2E-31 284.3 23.5 130 17-149 28-161 (570)
279 3t6q_A CD180 antigen; protein- 99.9 1.1E-26 3.7E-31 285.1 25.3 288 18-325 255-561 (606)
280 4fcg_A Uncharacterized protein 99.9 4.1E-27 1.4E-31 268.6 19.4 209 68-281 81-299 (328)
281 4fmz_A Internalin; leucine ric 99.9 6.2E-26 2.1E-30 258.9 29.1 271 18-307 45-325 (347)
282 3o6n_A APL1; leucine-rich repe 99.9 7.5E-27 2.5E-31 271.5 21.5 283 17-325 45-353 (390)
283 3vq2_A TLR4, TOLL-like recepto 99.9 2E-26 7E-31 282.6 25.0 305 17-325 56-559 (606)
284 4azs_A Methyltransferase WBDD; 99.9 2.5E-28 8.6E-33 298.7 7.8 191 808-1042 240-435 (569)
285 2z7x_B TOLL-like receptor 1, v 99.9 1.7E-26 5.9E-31 278.2 22.7 243 17-271 45-458 (520)
286 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 3.5E-26 1.2E-30 278.8 25.1 243 17-271 76-487 (562)
287 1ozn_A Reticulon 4 receptor; N 99.9 3E-26 1E-30 255.0 22.3 229 44-281 14-249 (285)
288 2z80_A TOLL-like receptor 2, v 99.9 3.4E-27 1.2E-31 270.9 15.0 244 22-274 36-318 (353)
289 3oja_B Anopheles plasmodium-re 99.9 1.5E-26 5.2E-31 284.5 21.7 292 18-325 52-359 (597)
290 2z81_A CD282 antigen, TOLL-lik 99.9 2.4E-26 8.4E-31 278.3 22.2 283 17-308 50-512 (549)
291 3j0a_A TOLL-like receptor 5; m 99.9 5E-26 1.7E-30 290.9 26.2 290 15-307 22-415 (844)
292 3v47_A TOLL-like receptor 5B a 99.9 8.1E-26 2.8E-30 267.3 25.7 295 21-325 14-409 (455)
293 4fmz_A Internalin; leucine ric 99.9 1.8E-25 6.1E-30 255.1 26.6 255 17-290 66-325 (347)
294 3bz5_A Internalin-J, INLJ; leu 99.9 2.7E-25 9.1E-30 265.1 28.5 227 17-271 42-268 (457)
295 1o6v_A Internalin A; bacterial 99.9 1.9E-25 6.4E-30 266.3 26.6 236 17-271 68-323 (466)
296 1ziw_A TOLL-like receptor 3; i 99.9 2.2E-25 7.4E-30 277.4 27.6 306 18-326 223-624 (680)
297 3bz5_A Internalin-J, INLJ; leu 99.9 3.2E-25 1.1E-29 264.4 27.4 265 17-307 64-369 (457)
298 3j0a_A TOLL-like receptor 5; m 99.9 4.6E-26 1.6E-30 291.3 20.5 282 17-326 266-562 (844)
299 1ziw_A TOLL-like receptor 3; i 99.9 2.6E-25 8.9E-30 276.7 26.1 253 17-271 329-598 (680)
300 2z63_A TOLL-like receptor 4, v 99.9 1.5E-25 5.1E-30 272.2 23.1 306 17-325 52-532 (570)
301 1o6v_A Internalin A; bacterial 99.9 7.4E-25 2.5E-29 261.2 27.2 237 17-272 90-346 (466)
302 2z66_A Variable lymphocyte rec 99.9 6.2E-25 2.1E-29 246.6 21.6 219 43-271 9-237 (306)
303 1wwl_A Monocyte differentiatio 99.9 1.2E-26 4.1E-31 262.3 6.8 245 18-271 44-310 (312)
304 1jl5_A Outer protein YOPM; leu 99.9 2.9E-24 9.8E-29 256.0 27.3 276 18-325 132-430 (454)
305 3o53_A Protein LRIM1, AGAP0063 99.9 5.7E-26 1.9E-30 257.3 11.8 238 19-271 12-251 (317)
306 3o53_A Protein LRIM1, AGAP0063 99.9 2.1E-26 7.3E-31 260.8 6.5 241 16-271 33-277 (317)
307 3oja_A Leucine-rich immune mol 99.9 7.7E-26 2.6E-30 271.9 11.5 220 37-271 30-251 (487)
308 3oja_A Leucine-rich immune mol 99.9 3.4E-25 1.2E-29 266.3 15.6 237 14-265 31-270 (487)
309 1ozn_A Reticulon 4 receptor; N 99.9 9.4E-25 3.2E-29 242.8 17.4 248 20-279 14-268 (285)
310 3zyj_A Leucine-rich repeat-con 99.9 3.6E-24 1.2E-28 253.4 23.0 224 16-247 63-293 (440)
311 3zyi_A Leucine-rich repeat-con 99.9 3.9E-24 1.3E-28 253.9 23.1 224 16-247 74-304 (452)
312 1wwl_A Monocyte differentiatio 99.9 2.5E-25 8.5E-30 251.5 11.4 225 19-248 65-311 (312)
313 2z80_A TOLL-like receptor 2, v 99.9 4.9E-25 1.7E-29 252.9 13.9 224 38-271 28-291 (353)
314 4g8a_A TOLL-like receptor 4; l 99.9 1.3E-23 4.4E-28 257.3 26.6 147 24-178 38-187 (635)
315 2z62_A TOLL-like receptor 4, v 99.9 4.6E-24 1.6E-28 236.2 20.5 204 42-274 29-241 (276)
316 1jl5_A Outer protein YOPM; leu 99.9 1.9E-24 6.5E-29 257.5 17.1 266 18-307 12-291 (454)
317 1p9a_G Platelet glycoprotein I 99.9 1E-23 3.6E-28 236.3 21.1 210 37-281 6-219 (290)
318 3g06_A SSPH2 (leucine-rich rep 99.9 2.7E-23 9.1E-28 256.4 26.2 239 18-309 62-300 (622)
319 2o6q_A Variable lymphocyte rec 99.9 4.4E-23 1.5E-27 228.1 23.9 201 42-274 17-222 (270)
320 3en9_A Glycoprotease, O-sialog 99.9 1.3E-24 4.5E-29 264.3 8.2 201 805-1046 339-539 (540)
321 2z62_A TOLL-like receptor 4, v 99.9 8.7E-23 3E-27 225.9 20.3 206 16-249 27-240 (276)
322 1p9a_G Platelet glycoprotein I 99.9 1.1E-22 3.8E-27 228.0 21.3 197 18-247 11-209 (290)
323 1h6u_A Internalin H; cell adhe 99.9 9.5E-23 3.2E-27 230.3 19.4 195 37-271 37-231 (308)
324 4glp_A Monocyte differentiatio 99.9 6.3E-23 2.2E-27 231.4 13.6 228 40-271 63-308 (310)
325 3g06_A SSPH2 (leucine-rich rep 99.9 3.1E-22 1.1E-26 246.9 20.5 226 16-280 80-305 (622)
326 1h6u_A Internalin H; cell adhe 99.9 3.2E-22 1.1E-26 226.0 18.7 193 18-250 42-234 (308)
327 2o6q_A Variable lymphocyte rec 99.9 1.5E-21 5E-26 215.9 23.3 199 18-248 17-220 (270)
328 4glp_A Monocyte differentiatio 99.9 4.3E-22 1.5E-26 224.6 15.2 203 40-247 90-308 (310)
329 2ca6_A RAN GTPase-activating p 99.9 1.7E-23 5.7E-28 243.1 3.7 237 35-271 26-317 (386)
330 3rfs_A Internalin B, repeat mo 99.9 4.2E-22 1.4E-26 220.6 14.5 200 68-314 41-243 (272)
331 3rfs_A Internalin B, repeat mo 99.9 1.1E-21 3.9E-26 217.1 17.2 199 69-309 20-221 (272)
332 2xwt_C Thyrotropin receptor; s 99.9 1.3E-21 4.5E-26 212.0 17.0 193 42-268 32-237 (239)
333 2xwt_C Thyrotropin receptor; s 99.9 9.1E-22 3.1E-26 213.2 14.8 177 69-272 32-220 (239)
334 3m19_A Variable lymphocyte rec 99.9 3.9E-21 1.3E-25 210.2 19.7 179 69-275 15-198 (251)
335 3cvr_A Invasion plasmid antige 99.9 2.2E-21 7.5E-26 236.8 17.5 185 42-280 60-251 (571)
336 3cvr_A Invasion plasmid antige 99.8 7.9E-21 2.7E-25 231.9 18.9 180 92-309 60-246 (571)
337 2ca6_A RAN GTPase-activating p 99.8 7E-22 2.4E-26 229.4 5.1 234 17-250 32-320 (386)
338 3goz_A Leucine-rich repeat-con 99.8 1E-21 3.4E-26 226.6 5.7 247 22-271 3-298 (362)
339 4ay9_X Follicle-stimulating ho 99.8 4.5E-20 1.5E-24 211.9 17.8 235 21-268 13-257 (350)
340 1z7x_W Ribonuclease inhibitor; 99.8 3.3E-22 1.1E-26 236.5 -1.2 252 17-271 56-355 (461)
341 2ast_B S-phase kinase-associat 99.8 2.3E-21 8E-26 219.8 5.5 241 18-271 48-307 (336)
342 1z7x_W Ribonuclease inhibitor; 99.8 2.6E-22 9E-27 237.4 -3.2 290 18-307 29-384 (461)
343 1h6t_A Internalin B; cell adhe 99.8 2.5E-20 8.6E-25 208.9 13.0 170 68-248 46-215 (291)
344 3m19_A Variable lymphocyte rec 99.8 2.1E-19 7.2E-24 196.4 19.6 175 42-248 15-194 (251)
345 3goz_A Leucine-rich repeat-con 99.8 7.7E-21 2.6E-25 219.2 8.2 224 45-271 2-267 (362)
346 4ay9_X Follicle-stimulating ho 99.8 1.3E-19 4.4E-24 208.1 16.6 219 16-244 29-257 (350)
347 2xot_A Amphoterin-induced prot 99.8 9.6E-20 3.3E-24 210.2 13.0 180 71-278 21-210 (361)
348 1h6t_A Internalin B; cell adhe 99.8 3.8E-19 1.3E-23 199.3 17.4 191 68-271 24-214 (291)
349 1zar_A RIO2 kinase; serine kin 99.8 8E-20 2.7E-24 204.2 11.1 152 803-1015 91-253 (282)
350 1m9s_A Internalin B; cell inva 99.8 1.7E-19 5.9E-24 221.9 14.8 171 68-249 43-213 (605)
351 2ast_B S-phase kinase-associat 99.8 3.9E-20 1.3E-24 209.7 6.3 231 17-255 70-315 (336)
352 1m9s_A Internalin B; cell inva 99.8 4E-19 1.4E-23 218.7 13.8 190 22-228 26-215 (605)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 1.3E-18 4.3E-23 187.0 15.5 121 160-280 53-176 (220)
354 2v9t_B SLIT homolog 2 protein 99.8 2.3E-18 7.8E-23 185.0 16.2 122 160-281 52-176 (220)
355 3e6j_A Variable lymphocyte rec 99.8 4.1E-18 1.4E-22 184.0 18.1 116 159-274 59-176 (229)
356 1dce_A Protein (RAB geranylger 99.8 2.6E-21 8.8E-26 236.6 -8.6 196 56-272 337-548 (567)
357 2o6s_A Variable lymphocyte rec 99.8 3.2E-18 1.1E-22 181.3 15.3 92 160-257 96-189 (208)
358 1xeu_A Internalin C; cellular 99.8 6.6E-19 2.2E-23 194.5 9.3 167 69-271 20-186 (263)
359 1xeu_A Internalin C; cellular 99.8 1.3E-18 4.5E-23 192.1 11.6 149 89-272 17-165 (263)
360 2o6s_A Variable lymphocyte rec 99.7 9.8E-18 3.4E-22 177.6 15.4 169 69-250 29-202 (208)
361 3e6j_A Variable lymphocyte rec 99.7 3.8E-17 1.3E-21 176.5 17.5 153 70-250 21-176 (229)
362 4b8c_D Glucose-repressible alc 99.7 8.4E-19 2.9E-23 220.5 4.7 194 40-267 172-369 (727)
363 4ezg_A Putative uncharacterize 99.7 1.4E-17 4.8E-22 175.3 12.7 152 88-271 41-195 (197)
364 1zth_A RIO1 serine protein kin 99.7 1.2E-17 4.3E-22 183.7 12.7 142 804-980 49-218 (258)
365 1dce_A Protein (RAB geranylger 99.7 9.7E-20 3.3E-24 222.7 -6.5 203 37-264 345-567 (567)
366 4ezg_A Putative uncharacterize 99.7 4.5E-17 1.5E-21 171.4 13.7 150 68-247 44-195 (197)
367 2v9t_B SLIT homolog 2 protein 99.7 7.3E-17 2.5E-21 173.3 15.5 149 71-247 14-166 (220)
368 2xot_A Amphoterin-induced prot 99.7 3.9E-17 1.3E-21 188.3 14.3 172 44-247 21-203 (361)
369 2v70_A SLIT-2, SLIT homolog 2 99.7 1.8E-16 6.3E-21 170.1 16.2 151 71-249 14-169 (220)
370 4b8c_D Glucose-repressible alc 99.7 4.6E-18 1.6E-22 213.8 4.2 195 68-286 173-369 (727)
371 1w8a_A SLIT protein; signaling 99.6 6.8E-16 2.3E-20 162.0 12.3 134 140-279 11-148 (192)
372 3ogk_B Coronatine-insensitive 99.6 8.5E-17 2.9E-21 196.3 5.6 253 17-270 192-501 (592)
373 3sb4_A Hypothetical leucine ri 99.6 8.7E-16 3E-20 174.6 13.3 222 40-264 48-328 (329)
374 2wfh_A SLIT homolog 2 protein 99.6 1.6E-15 5.4E-20 159.7 13.5 136 140-281 13-150 (193)
375 2ell_A Acidic leucine-rich nuc 99.6 3.5E-15 1.2E-19 152.5 11.5 133 68-227 24-164 (168)
376 4fdw_A Leucine rich hypothetic 99.6 4.8E-14 1.6E-18 165.2 21.8 228 27-271 122-359 (401)
377 3ogk_B Coronatine-insensitive 99.6 2.4E-16 8.2E-21 192.3 2.2 239 19-265 140-411 (592)
378 4gyi_A RIO2 kinase; protein ki 99.6 3.9E-15 1.3E-19 172.4 11.2 148 804-980 97-264 (397)
379 2ell_A Acidic leucine-rich nuc 99.6 7.4E-15 2.5E-19 150.0 11.2 138 39-205 22-165 (168)
380 4fdw_A Leucine rich hypothetic 99.5 1E-13 3.4E-18 162.5 20.5 248 7-271 127-384 (401)
381 1w8a_A SLIT protein; signaling 99.5 8.8E-15 3E-19 153.6 9.7 125 71-223 11-139 (192)
382 2je0_A Acidic leucine-rich nuc 99.5 7.7E-15 2.6E-19 146.9 8.7 127 137-266 17-149 (149)
383 2wfh_A SLIT homolog 2 protein 99.5 3.7E-14 1.3E-18 149.2 14.2 64 183-246 74-139 (193)
384 2o6r_A Variable lymphocyte rec 99.5 6.8E-14 2.3E-18 144.2 14.9 128 140-273 10-140 (177)
385 3g39_A Variable lymphocyte rec 99.5 4.6E-14 1.6E-18 145.4 11.5 107 166-274 11-119 (170)
386 1a9n_A U2A', U2A'; complex (nu 99.5 1.8E-14 6.3E-19 148.6 8.5 105 165-270 43-153 (176)
387 1a9n_A U2A', U2A'; complex (nu 99.5 2.7E-14 9.2E-19 147.4 8.9 133 86-247 14-154 (176)
388 2r9u_A Variable lymphocyte rec 99.5 1.4E-13 4.9E-18 142.3 12.8 107 166-274 14-122 (174)
389 2o6r_A Variable lymphocyte rec 99.5 2.6E-13 9E-18 139.8 14.6 90 161-250 49-141 (177)
390 2je0_A Acidic leucine-rich nuc 99.5 4.1E-14 1.4E-18 141.6 8.2 128 41-172 17-148 (149)
391 2p1m_B Transport inhibitor res 99.5 1.3E-15 4.4E-20 185.7 -4.9 201 38-243 102-324 (594)
392 1ds9_A Outer arm dynein; leuci 99.4 3.9E-16 1.3E-20 164.4 -9.5 110 159-271 65-186 (198)
393 1ds9_A Outer arm dynein; leuci 99.4 5.3E-16 1.8E-20 163.4 -9.8 113 82-223 39-153 (198)
394 2p1m_B Transport inhibitor res 99.4 1.3E-14 4.4E-19 176.9 0.1 231 36-267 61-324 (594)
395 3sb4_A Hypothetical leucine ri 99.4 3.5E-13 1.2E-17 153.0 9.3 214 17-240 49-328 (329)
396 2ifg_A High affinity nerve gro 99.3 2.1E-12 7.2E-17 147.3 11.3 111 168-280 12-126 (347)
397 3g39_A Variable lymphocyte rec 99.2 2.7E-11 9.3E-16 124.5 11.7 106 139-250 11-119 (170)
398 2r9u_A Variable lymphocyte rec 99.2 2.6E-11 8.9E-16 125.3 11.2 82 68-149 33-117 (174)
399 3un9_A NLR family member X1; l 99.2 1.9E-12 6.4E-17 150.2 -1.7 163 92-254 73-260 (372)
400 3tm0_A Aminoglycoside 3'-phosp 99.1 2.3E-10 7.8E-15 125.0 11.4 139 801-978 13-211 (263)
401 3un9_A NLR family member X1; l 99.1 1.1E-11 3.8E-16 143.7 0.4 158 68-225 72-254 (372)
402 2ifg_A High affinity nerve gro 99.1 1.2E-10 4.1E-15 132.7 8.7 127 141-271 12-142 (347)
403 4fs7_A Uncharacterized protein 99.0 9.5E-09 3.2E-13 119.5 18.9 244 10-267 65-376 (394)
404 4gt6_A Cell surface protein; l 99.0 2.4E-08 8.1E-13 116.1 21.3 249 10-268 57-368 (394)
405 1nd4_A Aminoglycoside 3'-phosp 98.8 5.4E-09 1.8E-13 113.0 9.3 134 801-979 19-213 (264)
406 4h09_A Hypothetical leucine ri 98.8 9.4E-08 3.2E-12 110.1 19.5 239 18-267 47-320 (379)
407 3dxp_A Putative acyl-COA dehyd 98.8 6.3E-09 2.2E-13 119.3 8.8 147 806-980 42-248 (359)
408 2ra8_A Uncharacterized protein 98.8 2.8E-09 9.5E-14 123.1 5.6 151 110-268 168-341 (362)
409 4fs7_A Uncharacterized protein 98.8 3.3E-08 1.1E-12 114.9 14.8 221 26-262 147-393 (394)
410 4gt6_A Cell surface protein; l 98.8 1.1E-07 3.8E-12 110.5 18.9 232 28-267 50-344 (394)
411 3sg8_A APH(2'')-ID; antibiotic 98.7 2.7E-08 9.3E-13 111.4 9.1 196 808-1045 26-287 (304)
412 2ra8_A Uncharacterized protein 98.6 3.6E-08 1.2E-12 113.8 6.1 81 162-244 250-341 (362)
413 4h09_A Hypothetical leucine ri 98.4 4.4E-06 1.5E-10 96.1 19.2 242 8-267 61-343 (379)
414 1io0_A Tropomodulin; LRR prote 98.3 1.3E-07 4.6E-12 98.4 2.8 115 156-270 28-164 (185)
415 3rw6_A Nuclear RNA export fact 98.3 9.8E-08 3.4E-12 105.4 1.8 94 169-263 148-257 (267)
416 3r70_A Aminoglycoside phosphot 98.3 4.3E-06 1.5E-10 94.3 14.2 130 806-980 41-237 (320)
417 1io0_A Tropomodulin; LRR prote 98.2 6.6E-07 2.3E-11 93.1 3.9 112 135-246 34-164 (185)
418 3rw6_A Nuclear RNA export fact 98.2 3.4E-07 1.2E-11 101.1 1.0 78 161-239 167-257 (267)
419 3tdw_A Gentamicin resistance p 98.0 4.7E-05 1.6E-09 85.4 15.5 137 808-980 25-224 (306)
420 4gkh_A Aminoglycoside 3'-phosp 98.0 5.5E-05 1.9E-09 82.4 15.5 130 809-979 31-222 (272)
421 3rfe_A Platelet glycoprotein I 97.9 1.1E-05 3.6E-10 79.4 6.1 70 213-284 11-82 (130)
422 3ovc_A Hygromycin-B 4-O-kinase 97.8 7.1E-05 2.4E-09 86.1 10.9 76 805-906 44-121 (362)
423 3d1u_A Putative fructosamine-3 97.6 0.00024 8.4E-09 79.1 12.2 75 806-906 19-97 (288)
424 3ats_A Putative uncharacterize 97.6 9.5E-05 3.3E-09 84.1 8.5 85 806-906 24-120 (357)
425 2q83_A YTAA protein; 2635576, 97.5 0.0019 6.3E-08 72.4 17.7 30 943-979 222-251 (346)
426 2olc_A MTR kinase, methylthior 97.4 0.00034 1.2E-08 81.0 10.0 82 806-904 34-120 (397)
427 2pyw_A Uncharacterized protein 96.9 0.0028 9.5E-08 74.0 11.1 32 941-980 230-261 (420)
428 3dxq_A Choline/ethanolamine ki 96.7 0.0052 1.8E-07 68.2 11.0 71 807-906 23-95 (301)
429 3rfe_A Platelet glycoprotein I 96.7 0.002 6.9E-08 63.0 6.1 54 191-246 12-68 (130)
430 3jr1_A Putative fructosamine-3 96.6 0.025 8.4E-07 63.6 15.7 76 806-906 40-118 (312)
431 1pgv_A TMD-1, tropomodulin TMD 96.5 0.0015 5.2E-08 68.6 4.4 109 160-268 37-168 (197)
432 2ppq_A HSK, HK, homoserine kin 96.3 0.02 6.7E-07 63.8 12.2 149 806-979 26-216 (322)
433 1pgv_A TMD-1, tropomodulin TMD 96.2 0.0033 1.1E-07 66.0 4.8 87 37-123 37-135 (197)
434 3e4g_A ATP synthase subunit S, 96.2 0.0019 6.4E-08 66.6 2.8 81 188-268 62-150 (176)
435 3csv_A Aminoglycoside phosphot 96.2 0.013 4.4E-07 65.8 9.9 35 943-980 183-217 (333)
436 3f7w_A Putative fructosamine-3 96.0 0.045 1.6E-06 60.1 13.1 75 805-905 18-96 (288)
437 2qg7_A Ethanolamine kinase PV0 95.9 0.058 2E-06 63.8 14.3 72 807-905 113-187 (458)
438 3feg_A Choline/ethanolamine ki 95.3 0.042 1.4E-06 63.4 9.7 143 808-980 56-254 (379)
439 2yle_A Protein spire homolog 1 95.3 0.12 4E-06 54.9 12.0 100 904-1042 33-133 (229)
440 3e4g_A ATP synthase subunit S, 95.1 0.015 5.2E-07 59.8 4.6 79 41-123 61-148 (176)
441 3c5i_A Choline kinase; choline 94.9 0.088 3E-06 59.9 10.9 72 807-905 38-120 (369)
442 1nw1_A Choline kinase (49.2 KD 94.7 0.18 6.2E-06 59.0 13.0 70 807-904 78-157 (429)
443 1zyl_A Hypothetical protein YI 94.5 0.18 6.3E-06 56.0 11.8 79 808-905 32-113 (328)
444 3i1a_A Spectinomycin phosphotr 93.1 0.77 2.6E-05 51.7 13.7 30 944-980 207-236 (339)
445 3mes_A Choline kinase; malaria 93.0 0.49 1.7E-05 55.3 12.3 72 807-905 75-156 (424)
446 3f2s_A CK, chetk-alpha, cholin 90.3 1.7 5.7E-05 50.4 12.6 35 944-979 245-279 (401)
447 3g15_A CK, chetk-alpha, cholin 85.6 2.1 7.2E-05 49.3 9.6 35 945-980 246-280 (401)
448 3isr_A Transglutaminase-like e 80.5 0.61 2.1E-05 51.8 2.1 43 700-744 177-223 (293)
449 2f4m_A Peptide N-glycanase; gl 78.8 0.7 2.4E-05 51.0 1.9 45 700-749 139-183 (295)
450 3cxl_A N-chimerin; SH2, RHO-GA 61.8 0.66 2.2E-05 54.9 -3.5 64 806-876 146-215 (463)
451 1x3z_A Peptide: N-glycanase; h 49.0 6.3 0.00022 44.1 2.0 45 700-749 180-224 (335)
452 2q3z_A Transglutaminase 2; tra 46.8 5.4 0.00018 48.9 1.0 32 698-731 271-302 (687)
453 1vjj_A Protein-glutamine gluta 42.4 6 0.00021 48.5 0.5 31 699-731 267-297 (692)
454 4ano_A ESSB; membrane protein, 41.6 41 0.0014 35.5 6.7 48 921-977 82-130 (219)
455 1ex0_A Coagulation factor XIII 34.7 11 0.00038 46.4 1.1 33 698-732 308-340 (731)
456 4ann_A ESSB; membrane protein, 34.3 28 0.00095 36.6 4.0 84 861-977 41-125 (215)
457 1g0d_A Protein-glutamine gamma 27.3 18 0.00062 44.2 1.2 32 699-732 267-298 (695)
458 2x6h_A GH13170P, VPS34, phosph 20.5 1.8E+02 0.0063 35.7 8.2 45 924-979 529-575 (696)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.6e-51 Score=467.22 Aligned_cols=261 Identities=25% Similarity=0.337 Sum_probs=215.5
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
..++++|++.++||+|+||+||+|++. ++.||||+.... .......+. +.+|+.+|++++|||||++++++.
T Consensus 20 f~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~~~----~~~E~~il~~l~HpnIV~~~~~~~ 93 (350)
T 4b9d_A 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINIS--RMSSKEREE----SRREVAVLANMKHPNIVQYRESFE 93 (350)
T ss_dssp CSCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECT--TSCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehH--HCCHHHHHH----HHHHHHHHHHCCCCCCCcEEEEEE
Confidence 346789999999999999999999985 577999985433 223333344 489999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+++ .+|||||||+||+|.++|.. .....+++..++.|+.||+.||+|||++|||||||||+||
T Consensus 94 ~~~--------------~~yiVmEy~~gg~L~~~i~~---~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NI 156 (350)
T 4b9d_A 94 ENG--------------SLYIVMDYCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNI 156 (350)
T ss_dssp ETT--------------EEEEEEECCTTCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGE
T ss_pred ECC--------------EEEEEEeCCCCCcHHHHHHH---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHE
Confidence 776 67999999999999999976 2345689999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
||+.+ +.+||+|||+|+........ ....+||+.|||||++.+ ..|+.++|||||||++
T Consensus 157 Ll~~~-------g~vKl~DFGla~~~~~~~~~----------~~~~~GT~~YmAPE~l~~----~~y~~~~DiwSlGvil 215 (350)
T 4b9d_A 157 FLTKD-------GTVQLGDFGIARVLNSTVEL----------ARACIGTPYYLSPEICEN----KPYNNKSDIWALGCVL 215 (350)
T ss_dssp EECTT-------CCEEECSTTEESCCCHHHHH----------HHHHHSCCTTCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred EECCC-------CCEEEcccccceeecCCccc----------ccccCCCccccCHHHHCC----CCCCcHHHHHHHHHHH
Confidence 99987 78999999999866532211 113579999999999976 5789999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|||+||+.||.+.+..++...+..+..+.++. ..++++.+||.+||+.||++|
T Consensus 216 yemltG~~PF~~~~~~~~~~~i~~~~~~~~~~---------------------------~~s~~~~~li~~~L~~dP~~R 268 (350)
T 4b9d_A 216 YELCTLKHAFEAGSMKNLVLKIISGSFPPVSL---------------------------HYSYDLRSLVSQLFKRNPRDR 268 (350)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHccCChhHC
Confidence 99999999999999999988887766543322 344569999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001152 1116 PTAGDLYEMFVART 1129 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~ 1129 (1137)
||++|+++|+|+..
T Consensus 269 ~s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 269 PSVNSILEKGFIAK 282 (350)
T ss_dssp CCHHHHHTSHHHHT
T ss_pred cCHHHHhcCHHhhc
Confidence 99999999999864
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.9e-50 Score=463.20 Aligned_cols=257 Identities=26% Similarity=0.416 Sum_probs=217.5
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..|++.++||+|+||+||+|++. +..||||+....... ..+ .+.+|+.+|++++|||||+++++|.+.+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~----~~~~Ei~il~~l~HpnIV~l~~~~~~~~- 144 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRE----LLFNEVVIMRDYQHENVVEMYNSYLVGD- 144 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGG----GGHHHHHHHHHCCCTTBCCEEEEEEETT-
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----HHH----HHHHHHHHHHhCCCCCCCcEEEEEEECC-
Confidence 45999999999999999999985 577899986544221 122 2478999999999999999999999876
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
++|||||||+||+|.+++.+ ..+++..+..|+.||+.||+|||++|||||||||+||||+.
T Consensus 145 -------------~~~ivmEy~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~ 205 (346)
T 4fih_A 145 -------------ELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 205 (346)
T ss_dssp -------------EEEEEECCCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred -------------EEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECC
Confidence 67999999999999999975 35999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+|+.+..... .....+||+.|||||++.+ ..|+.++|||||||++|||+
T Consensus 206 ~-------g~vKl~DFGla~~~~~~~~----------~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilyeml 264 (346)
T 4fih_A 206 D-------GRVKLSDFGFCAQVSKEVP----------RRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEMV 264 (346)
T ss_dssp T-------CCEEECCCTTCEECCSSSC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEecCcCceecCCCCC----------cccccccCcCcCCHHHHCC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 7899999999986643221 1124579999999999875 57899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|+.||.+.+..++...|.....+.+... ...++++.+||.+||+.||++|||++
T Consensus 265 ~G~~PF~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~s~~~~dli~~~L~~dP~~R~ta~ 319 (346)
T 4fih_A 265 DGEPPYFNEPPLKAMKMIRDNLPPRLKNL-------------------------HKVSPSLKGFLDRLLVRDPAQRATAA 319 (346)
T ss_dssp HSSCTTTTSCHHHHHHHHHHSSCCCCSCG-------------------------GGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HCCCCCCCcCHHHHHHHHHcCCCCCCCcc-------------------------ccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 99999999998888888876554332210 14456799999999999999999999
Q ss_pred HHHHHHHhhcCCC
Q 001152 1120 DLYEMFVARTSSS 1132 (1137)
Q Consensus 1120 EVL~~L~~~~~ss 1132 (1137)
|+++|+|+....+
T Consensus 320 e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 320 ELLKHPFLAKAGP 332 (346)
T ss_dssp HHTTCGGGGGCCC
T ss_pred HHhcCHhhcCCCC
Confidence 9999999987543
No 3
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-49 Score=444.13 Aligned_cols=258 Identities=23% Similarity=0.306 Sum_probs=201.5
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
.+++|++.+.||+|+||+||+|++. ++.||+|+........ . ....++.+|+.+|++++|||||++++++.++
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-~----~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~ 85 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-S----DMQGRIEREISYLRLLRHPHIIKLYDVIKSK 85 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC-H----HHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence 4789999999999999999999984 5789999864332211 1 1223458999999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+ ..|+||||+ +|+|.+++.+ ...+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 86 ~--------------~~~ivmEy~-~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl 145 (275)
T 3hyh_A 86 D--------------EIIMVIEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 145 (275)
T ss_dssp S--------------EEEEEEECC-CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE
T ss_pred C--------------EEEEEEeCC-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE
Confidence 6 679999999 6899999976 3469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||+|+....... ....+||+.|||||++.+ ...++.++||||+||++|+
T Consensus 146 ~~~-------~~vkl~DFGla~~~~~~~~-----------~~~~~GT~~Y~APE~~~~---~~y~~~~~DiwSlGvily~ 204 (275)
T 3hyh_A 146 DEH-------LNVKIADFGLSNIMTDGNF-----------LKTSCGSPNYAAPEVISG---KLYAGPEVDVWSCGVILYV 204 (275)
T ss_dssp CTT-------CCEEECCSSCC--------------------------CTTSCHHHHSS---SSCCCTHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeecCCCeecCCCCc-----------cCCeeECcccCChhhhcC---CCCCCChhhhHHHHHHHHH
Confidence 987 7899999999976543211 124579999999999976 2345789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
|+||+.||.+.+..++...+..+..+ ++. ..++++++|+.+||+.||++|||
T Consensus 205 lltg~~PF~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~li~~~L~~dP~~R~s 256 (275)
T 3hyh_A 205 MLCRRLPFDDESIPVLFKNISNGVYT-LPK---------------------------FLSPGAAGLIKRMLIVNPLNRIS 256 (275)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHTCCC-CCT---------------------------TSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHcCCCC-CCC---------------------------CCCHHHHHHHHHHccCChhHCcC
Confidence 99999999998888888888765432 111 23456899999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001152 1118 AGDLYEMFVARTSS 1131 (1137)
Q Consensus 1118 a~EVL~~L~~~~~s 1131 (1137)
++|+++|+|++..-
T Consensus 257 ~~eil~hpw~k~~~ 270 (275)
T 3hyh_A 257 IHEIMQDDWFKVDL 270 (275)
T ss_dssp HHHHHHCHHHHTTC
T ss_pred HHHHHcCcccccCC
Confidence 99999999998643
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.1e-50 Score=452.69 Aligned_cols=260 Identities=21% Similarity=0.261 Sum_probs=216.0
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+|++.+.||+|+||+||+|++. ++.||+|+...... ..+....++.+|+++|++++|||||+++++|.++
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-----~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 104 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-----IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD 104 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence 4567999999999999999999985 57799998643211 1111223458999999999999999999999987
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+ .+|||||||+||+|.+++++ ...+++..++.|+.||+.||+|||++|||||||||+|||+
T Consensus 105 ~--------------~~yivmEy~~gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl 165 (311)
T 4aw0_A 105 E--------------KLYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 165 (311)
T ss_dssp S--------------EEEEEECCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred C--------------EEEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE
Confidence 6 67999999999999999986 2469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||+|+.+...... ......+||+.|||||++.+ ..|+.++||||+||++||
T Consensus 166 ~~~-------g~vKl~DFGla~~~~~~~~~--------~~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilye 226 (311)
T 4aw0_A 166 NED-------MHIQITDFGTAKVLSPESKQ--------ARANSFVGTAQYVSPELLTE----KSACKSSDLWALGCIIYQ 226 (311)
T ss_dssp CTT-------SCEEECCCTTCEECCTTTTC--------CCBCCCCSCGGGCCHHHHHH----SCBCHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEEEcCCceecCCCCCc--------ccccCcccCcccCCHHHHcC----CCCCcHHHHHHHHHHHHH
Confidence 987 78999999999876432211 11234579999999999986 568999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
|++|..||.+.+..++...|..+... ++. ..++++++||.+||+.||.+|||
T Consensus 227 ml~G~~PF~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~dli~~lL~~dp~~R~t 278 (311)
T 4aw0_A 227 LVAGLPPFRAGNEGLIFAKIIKLEYD-FPE---------------------------KFFPKARDLVEKLLVLDATKRLG 278 (311)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHTCCC-CCT---------------------------TCCHHHHHHHHHHSCSSGGGSTT
T ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCC-CCc---------------------------ccCHHHHHHHHHHccCCHhHCcC
Confidence 99999999999999888888765432 111 23456999999999999999999
Q ss_pred HHH------HHHHHHhhcC
Q 001152 1118 AGD------LYEMFVARTS 1130 (1137)
Q Consensus 1118 a~E------VL~~L~~~~~ 1130 (1137)
++| |++|+||..-
T Consensus 279 ~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 279 CEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp SGGGTCHHHHHTSGGGTTC
T ss_pred hHHHcCCHHHHCCCCcCCC
Confidence 987 5788888653
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-49 Score=447.52 Aligned_cols=267 Identities=25% Similarity=0.383 Sum_probs=209.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
....++++.++||+|+||+||+|++.+ .||||+++ .........+.+ .+|+.+|++++|||||++++++.++
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~--~~~~~~~~~~~f----~~E~~il~~l~HpNIV~l~g~~~~~- 104 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK--VVDPTPEQFQAF----RNEVAVLRKTRHVNILLFMGYMTKD- 104 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECC--CSSCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEE--ecCCCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEEECC-
Confidence 345678999999999999999999865 58999843 333334444444 8999999999999999999987543
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
.++||||||+||+|.++++. ....+++.++..|+.|||.||+|||+++||||||||+|||++
T Consensus 105 --------------~~~iVmEy~~gGsL~~~l~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~ 166 (307)
T 3omv_A 105 --------------NLAIVTQWCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH 166 (307)
T ss_dssp --------------SCEEEEECCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE
T ss_pred --------------eEEEEEEcCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC
Confidence 35999999999999999975 234699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||+|+........ ......+||+.|||||++.+. ....|+.++|||||||++|||
T Consensus 167 ~~-------~~~Ki~DFGla~~~~~~~~~--------~~~~~~~GT~~ymAPE~l~~~-~~~~y~~ksDVwS~Gvvl~El 230 (307)
T 3omv_A 167 EG-------LTVKIGDFGLATVKSRWSGS--------QQVEQPTGSVLWMAPEVIRMQ-DNNPFSFQSDVYSYGIVLYEL 230 (307)
T ss_dssp TT-------EEEEECCCSSCBC--------------------CCCCTTSCCHHHHHCC-SSCCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeeccCceecccCCcc--------eeecccccCCCccCHHHhhcc-CCCCCCcHHHhHhHHHHHHHH
Confidence 87 78999999999765432211 111245799999999999752 234689999999999999999
Q ss_pred HhCCCCCCCCCHHH-HHHHHHcCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1039 LTLQVPYMGLSELE-IHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~e-l~~~I~~g~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+||+.||.+.+... +...+..+.. |.++. ....+++++.+|+.+||+.||++||
T Consensus 231 ltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~------------------------~~~~~~~~l~~li~~cl~~dP~~RP 286 (307)
T 3omv_A 231 MTGELPYSHINNRDQIIFMVGRGYASPDLSK------------------------LYKNCPKAMKRLVADCVKKVKEERP 286 (307)
T ss_dssp HHSSCTTTTCCCHHHHHHHHHTTCCCCCSTT------------------------SCTTSCHHHHHHHHHHTCSSSTTSC
T ss_pred HHCCCCCCCCChHHHHHHHHhcCCCCCCccc------------------------ccccchHHHHHHHHHHcCCCHhHCc
Confidence 99999998765544 4444444432 11110 0114567799999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001152 1117 TAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~s 1131 (1137)
||.||+++++....+
T Consensus 287 s~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 287 LFPQILSSIELLQHS 301 (307)
T ss_dssp CHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhcc
Confidence 999999999877543
No 6
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-49 Score=446.01 Aligned_cols=258 Identities=23% Similarity=0.337 Sum_probs=203.1
Q ss_pred Cc-eEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 803 SL-SSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 803 ~y-~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
+| ++.++||+|+||+||+|.+.. ..||+|+. ..........+. +.+|+.+|++++|||||+++++|.+...
T Consensus 26 r~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i--~~~~~~~~~~~~----~~~E~~il~~l~HpnIV~~~~~~~~~~~ 99 (290)
T 3fpq_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCEL--QDRKLTKSERQR----FKEEAEMLKGLQHPNIVRFYDSWESTVK 99 (290)
T ss_dssp SEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEE--EGGGSCHHHHHH----HHHHHHHHHTCCCTTBCCEEEEEEEEET
T ss_pred ceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEE--chhhCCHHHHHH----HHHHHHHHHhCCCCCCCcEEEEEeeccC
Confidence 44 788899999999999999965 45666654 333233333333 4899999999999999999999875310
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeEe
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENILI 957 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~g--IIHrDLKP~NILl 957 (1137)
....+|||||||+||+|.+++++ ...+++..+..|+.||+.||+|||+++ ||||||||+|||+
T Consensus 100 ----------~~~~~~lvmEy~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl 164 (290)
T 3fpq_A 100 ----------GKKCIVLVTELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 164 (290)
T ss_dssp ----------TEEEEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEE
T ss_pred ----------CCcEEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeE
Confidence 11257999999999999999986 246999999999999999999999998 9999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+... +.+||+|||+|+...... ....+||+.|||||++.+ .|+.++|||||||++||
T Consensus 165 ~~~~------g~vKl~DFGla~~~~~~~------------~~~~~GTp~YmAPE~~~~-----~y~~~~DiwSlGvilye 221 (290)
T 3fpq_A 165 TGPT------GSVKIGDLGLATLKRASF------------AKAVIGTPEFMAPEMYEE-----KYDESVDVYAFGMCMLE 221 (290)
T ss_dssp SSTT------SCEEECCTTGGGGCCTTS------------BEESCSSCCCCCGGGGGT-----CCCTHHHHHHHHHHHHH
T ss_pred ECCC------CCEEEEeCcCCEeCCCCc------------cCCcccCccccCHHHcCC-----CCCcHHHHHHHHHHHHH
Confidence 7421 689999999997533211 124579999999999863 58999999999999999
Q ss_pred HHhCCCCCCCC-CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1038 LLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1038 LLTG~~Pf~~~-~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
|+||+.||.+. ....+...+..+..|... ....++++.+|+.+||+.||++||
T Consensus 222 lltg~~Pf~~~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~R~ 275 (290)
T 3fpq_A 222 MATSEYPYSECQNAAQIYRRVTSGVKPASF--------------------------DKVAIPEVKEIIEGCIRQNKDERY 275 (290)
T ss_dssp HHHSSCTTTTCSSHHHHHHHHTTTCCCGGG--------------------------GGCCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHHCCCCCCCCCcHHHHHHHHHcCCCCCCC--------------------------CccCCHHHHHHHHHHccCChhHCc
Confidence 99999999764 445555555554432111 013345699999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|++|+++|+|++..
T Consensus 276 s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 276 SIKDLLNHAFFQEE 289 (290)
T ss_dssp CHHHHHTSGGGC--
T ss_pred CHHHHhcCccccCC
Confidence 99999999999754
No 7
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.4e-49 Score=464.82 Aligned_cols=257 Identities=26% Similarity=0.418 Sum_probs=217.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..|++.++||+|+||+||+|++. +..||||+...... ...+ .+.+|+.+|+.++|||||+++++|.+.+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~----~~~~Ei~il~~l~HpnIV~l~~~~~~~~- 221 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRE----LLFNEVVIMRDYQHENVVEMYNSYLVGD- 221 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC----SSGG----GHHHHHHHHHHCCCTTBCCEEEEEEETT-
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch----hHHH----HHHHHHHHHHhCCCCCCCceEEEEEECC-
Confidence 45999999999999999999985 57789988654321 1122 3488999999999999999999999876
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
++|||||||+||+|.++++. ..+++..+..|+.||+.||+|||++|||||||||+||||+.
T Consensus 222 -------------~~~iVmEy~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~ 282 (423)
T 4fie_A 222 -------------ELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 282 (423)
T ss_dssp -------------EEEEEEECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECT
T ss_pred -------------EEEEEEeCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC
Confidence 67999999999999999975 35999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+|+.+..... .....+||+.|||||++.+ ..|+.++|||||||++|||+
T Consensus 283 ~-------g~vKl~DFGla~~~~~~~~----------~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilyeml 341 (423)
T 4fie_A 283 D-------GRVKLSDFGFCAQVSKEVP----------RRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEMV 341 (423)
T ss_dssp T-------CCEEECCCTTCEECCSSCC----------CBCCCEECTTTCCHHHHTT----CCBCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEecCccceECCCCCc----------cccccccCcCcCCHHHHCC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 7899999999986543221 1224679999999999975 57899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|+.||.+.+..++...|.....+.+... ...++++++||.+||+.||++|||++
T Consensus 342 ~G~~PF~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~s~~~~dli~~~L~~dP~~R~ta~ 396 (423)
T 4fie_A 342 DGEPPYFNEPPLKAMKMIRDNLPPRLKNL-------------------------HKVSPSLKGFLDRLLVRDPAQRATAA 396 (423)
T ss_dssp HSSCTTTTSCHHHHHHHHHHSCCCCCSCT-------------------------TSSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HCCCCCCCcCHHHHHHHHHcCCCCCCccc-------------------------ccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 99999999999888888876554332210 03456699999999999999999999
Q ss_pred HHHHHHHhhcCCC
Q 001152 1120 DLYEMFVARTSSS 1132 (1137)
Q Consensus 1120 EVL~~L~~~~~ss 1132 (1137)
|+++|+|+....+
T Consensus 397 ell~Hp~~~~~~~ 409 (423)
T 4fie_A 397 ELLKHPFLAKAGP 409 (423)
T ss_dssp HHTTCGGGGGCCC
T ss_pred HHhcCHHhcCCCC
Confidence 9999999987543
No 8
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8.9e-49 Score=448.09 Aligned_cols=265 Identities=23% Similarity=0.341 Sum_probs=211.7
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 872 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg 872 (1137)
...+|.+.++||+|+||+||+|++. +..||||+.+ . ......++ |.+|+++|++++|||||++++
T Consensus 39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~--~--~~~~~~~~----f~~E~~il~~l~HpnIV~l~g 110 (329)
T 4aoj_A 39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK--E--ASESARQD----FQREAELLTMLQHQHIVRFFG 110 (329)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEES--C--CSHHHHHH----HHHHHHHHTTCCCTTBCCEEE
T ss_pred CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEEC--c--CCHHHHHH----HHHHHHHHHhCCCCCCCcEEE
Confidence 3457899999999999999999974 3568888743 2 12333334 489999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc----------CCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----------GEKHVSVKLALFIAQDVAAALVELHS 942 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~----------~~~~ls~~~i~~I~~QIa~gL~yLHs 942 (1137)
++.+.. ..+||||||++|+|.++++..... ...++++.+++.|+.||+.||+|||+
T Consensus 111 ~~~~~~--------------~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~ 176 (329)
T 4aoj_A 111 VCTEGR--------------PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176 (329)
T ss_dssp EECSSS--------------SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECC--------------EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 998765 569999999999999999763211 12469999999999999999999999
Q ss_pred CCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCC
Q 001152 943 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1022 (1137)
Q Consensus 943 ~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1022 (1137)
++||||||||+|||++.+ +.+||+|||+++........ .......||+.|||||++.+ ..|
T Consensus 177 ~~iiHRDLKp~NILl~~~-------~~~Ki~DFGla~~~~~~~~~--------~~~~~~~gt~~ymAPE~~~~----~~~ 237 (329)
T 4aoj_A 177 LHFVHRDLATRNCLVGQG-------LVVKIGDFGMSRDIYSTDYY--------RVGGRTMLPIRWMPPESILY----RKF 237 (329)
T ss_dssp TTCCCSCCCGGGEEEETT-------TEEEECCCC------------------------CCCCGGGCCHHHHTT----CCC
T ss_pred CCeecccccHhhEEECCC-------CcEEEcccccceeccCCCcc--------eecCcccccccccChhhhcC----CCC
Confidence 999999999999999988 88999999999865432211 11123569999999999976 578
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001152 1023 GLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1101 (1137)
Q Consensus 1023 s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1101 (1137)
+.++|||||||++|||+| |+.||.+.+..++...+..+.++..+. .+++++.
T Consensus 238 ~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~---------------------------~~~~~~~ 290 (329)
T 4aoj_A 238 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR---------------------------ACPPEVY 290 (329)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHH
T ss_pred CccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcc---------------------------cccHHHH
Confidence 999999999999999999 899999999999888887776544332 3456699
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 001152 1102 DVFRRCTEENPTERPTAGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1102 dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ss 1132 (1137)
+|+.+||+.||++||||+||+++|+....++
T Consensus 291 ~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 291 AIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 9999999999999999999999998875543
No 9
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.6e-49 Score=445.56 Aligned_cols=262 Identities=23% Similarity=0.343 Sum_probs=214.3
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 872 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg 872 (1137)
+-.+|.+.++||+|+||+||+|++. +..||||+.+ .. .....++ |.+|+++|++++|||||+++|
T Consensus 11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~--~~--~~~~~~~----f~~E~~il~~l~HpnIV~l~g 82 (299)
T 4asz_A 11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLK--DA--SDNARKD----FHREAELLTNLQHEHIVKFYG 82 (299)
T ss_dssp CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEEC--SC--CHHHHHH----HHHHHHHHTTCCCTTBCCEEE
T ss_pred CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeC--CC--ChHHHHH----HHHHHHHHHhCCCCCCccEEE
Confidence 3457899999999999999999874 3567888743 21 2333334 489999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh--------cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE--------TGEKHVSVKLALFIAQDVAAALVELHSKH 944 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~--------~~~~~ls~~~i~~I~~QIa~gL~yLHs~g 944 (1137)
++.+.+ ..+||||||++|+|.++++.... .....+++.+++.|+.||+.||+|||+++
T Consensus 83 ~~~~~~--------------~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~ 148 (299)
T 4asz_A 83 VCVEGD--------------PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH 148 (299)
T ss_dssp EECSSS--------------SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeeCC--------------EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 998765 56999999999999999986321 22357999999999999999999999999
Q ss_pred eeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCc
Q 001152 945 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1024 (1137)
Q Consensus 945 IIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1024 (1137)
||||||||+|||++.+ +.+||+|||+|+......... ......||+.|||||++.+ ..|+.
T Consensus 149 iiHRDlKp~NILl~~~-------~~~Ki~DFGla~~~~~~~~~~--------~~~~~~gt~~ymAPE~~~~----~~~~~ 209 (299)
T 4asz_A 149 FVHRDLATRNCLVGEN-------LLVKIGDFGMSRDVYSTDYYR--------VGGHTMLPIRWMPPESIMY----RKFTT 209 (299)
T ss_dssp CCCSCCSGGGEEECGG-------GCEEECCCSCHHHHTGGGCEE--------ETTTEEECGGGCCHHHHHH----CCCCH
T ss_pred cccCccCHhhEEECCC-------CcEEECCcccceecCCCCcee--------ecCceecChhhcCHHHHcC----CCCCc
Confidence 9999999999999988 789999999998654322110 1123468999999999986 57899
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHH
Q 001152 1025 EVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1103 (1137)
Q Consensus 1025 ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1103 (1137)
++|||||||++|||+| |+.||.+.+..++...+..+..+..+. .+++++.+|
T Consensus 210 k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~~~~l 262 (299)
T 4asz_A 210 ESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPR---------------------------TCPQEVYEL 262 (299)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cchHHHHHH
Confidence 9999999999999999 899999999999998888776554332 345569999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1104 FRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1104 l~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
+.+||+.||++||||+||++.|....
T Consensus 263 i~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 263 MLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 99999999999999999988887654
No 10
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.4e-48 Score=442.43 Aligned_cols=265 Identities=20% Similarity=0.313 Sum_probs=216.2
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcce
Q 001152 797 DPGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVE 869 (1137)
Q Consensus 797 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVk 869 (1137)
....+.++++.++||+|+||+||+|++. +..||||+. +.... ....++ |.+|+.+|++++|||||+
T Consensus 21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l--~~~~~-~~~~~~----f~~E~~il~~l~HpNIV~ 93 (308)
T 4gt4_A 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAE-GPLREE----FRHEAMLRARLQHPNVVC 93 (308)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEEC--CC-CC-C-CHHH----HHHHHHHHHHCCCTTBCC
T ss_pred ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEE--CcccC-hHHHHH----HHHHHHHHHhCCCCCCCC
Confidence 3445677899999999999999999973 356788864 32221 222233 489999999999999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHH
Q 001152 870 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALV 938 (1137)
Q Consensus 870 llg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-----------~~~~ls~~~i~~I~~QIa~gL~ 938 (1137)
++|++.++. ..+||||||++|+|.++|...... ....+++.++..|+.|||.||+
T Consensus 94 l~g~~~~~~--------------~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~ 159 (308)
T 4gt4_A 94 LLGVVTKDQ--------------PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 159 (308)
T ss_dssp EEEEECSSS--------------SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHH
T ss_pred cceEEEECC--------------EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHH
Confidence 999998765 459999999999999999753211 1246999999999999999999
Q ss_pred HHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccC
Q 001152 939 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1018 (1137)
Q Consensus 939 yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1018 (1137)
|||+++||||||||+||||+.+ +.+||+|||+++........ .......||+.|||||++.+
T Consensus 160 yLH~~~iiHRDLK~~NILl~~~-------~~~Ki~DFGlar~~~~~~~~--------~~~~~~~gt~~ymAPE~l~~--- 221 (308)
T 4gt4_A 160 YLSSHHVVHKDLATRNVLVYDK-------LNVKISDLGLFREVYAADYY--------KLLGNSLLPIRWMAPEAIMY--- 221 (308)
T ss_dssp HHHHTTCCCSCCSGGGEEECGG-------GCEEECCSCCBCGGGGGGCB--------CSSSSSCBCGGGCCHHHHHH---
T ss_pred HHHhCCCCCCCccccceEECCC-------CCEEECCcccceeccCCCce--------eEecccccCCcccCHHHHhC---
Confidence 9999999999999999999988 78999999999865432211 11224579999999999986
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001152 1019 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1097 (1137)
Q Consensus 1019 ~~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1137)
..|+.++|||||||++|||+| |..||.+.+..++...+..+..+..+. .++
T Consensus 222 -~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~ 273 (308)
T 4gt4_A 222 -GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPD---------------------------DCP 273 (308)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TCC
T ss_pred -CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcc---------------------------cch
Confidence 578999999999999999998 899999999999998888776544332 345
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001152 1098 SFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1098 ~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
+++.+|+.+||+.||++||||.||+++|...
T Consensus 274 ~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 274 AWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 6699999999999999999999999999754
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2e-49 Score=447.91 Aligned_cols=256 Identities=24% Similarity=0.266 Sum_probs=207.9
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
..++|++.+.||+|+||+||+|++. +..||+|+....... ..+.. ++.+|+.+|++++|||||++++++
T Consensus 22 ~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--~~~~~----~~~~E~~il~~l~HpnIv~l~~~~ 95 (304)
T 3ubd_A 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRV----RTKMERDILVEVNHPFIVKLHYAF 95 (304)
T ss_dssp CGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE--EEECC----------CCCCCCCCTTEECEEEEE
T ss_pred CccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC--hHHHH----HHHHHHHHHHHCCCCCCCeEEEEE
Confidence 3468999999999999999999872 356899986433211 11111 347899999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+++ .+|||||||+||+|.+++++ ...+++..+..|+.||+.||+|||++||+||||||+|
T Consensus 96 ~~~~--------------~~~ivmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N 156 (304)
T 3ubd_A 96 QTEG--------------KLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPEN 156 (304)
T ss_dssp EETT--------------EEEEEECCCTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGG
T ss_pred EECC--------------EEEEEEEcCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHH
Confidence 9876 67999999999999999986 2469999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||+|+....... .....+||+.|||||++.+ ..|+.++|||||||+
T Consensus 157 ILl~~~-------g~vKl~DFGla~~~~~~~~----------~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvi 215 (304)
T 3ubd_A 157 ILLDEE-------GHIKLTDFGLSKESIDHEK----------KAYSFCGTVEYMAPEVVNR----RGHTQSADWWSFGVL 215 (304)
T ss_dssp EEECTT-------SCEEEESSEEEEC-----C----------CCCSCCCCGGGCCHHHHHT----SCCCTHHHHHHHHHH
T ss_pred eEEcCC-------CCEEecccccceeccCCCc----------cccccccCcccCCHHHhcc----CCCCCCCcccchHHH
Confidence 999987 7899999999975433211 1224579999999999976 578999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|||+||+.||.+.+..++...|..+..+ ++. ..++++.+||.+||+.||++
T Consensus 216 lyemltG~~PF~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~li~~~L~~dP~~ 267 (304)
T 3ubd_A 216 MFEMLTGTLPFQGKDRKETMTMILKAKLG-MPQ---------------------------FLSPEAQSLLRMLFKRNPAN 267 (304)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHhCCCCCCCcCHHHHHHHHHcCCCC-CCC---------------------------cCCHHHHHHHHHHcccCHHH
Confidence 99999999999999999888888765432 111 34456999999999999999
Q ss_pred CCC-----HHHHHHHHHhhc
Q 001152 1115 RPT-----AGDLYEMFVART 1129 (1137)
Q Consensus 1115 RPS-----a~EVL~~L~~~~ 1129 (1137)
||| ++|+++|+|++.
T Consensus 268 R~ta~~~~~~eil~Hp~f~~ 287 (304)
T 3ubd_A 268 RLGAGPDGVEEIKRHSFFST 287 (304)
T ss_dssp STTCSTTTHHHHHTSGGGTT
T ss_pred CCCCCcCCHHHHHcCccccC
Confidence 998 589999999974
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.1e-48 Score=444.89 Aligned_cols=255 Identities=24% Similarity=0.328 Sum_probs=206.0
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
.+..|++.++||+|+||+||+|++. +..||||+...+.. ..+|+.+|+.++|||||++++++.+.
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------------~~~E~~il~~l~HpnIV~l~~~~~~~ 122 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------------RVEELVACAGLSSPRIVPLYGAVREG 122 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------------CTHHHHTTTTCCCTTBCCEEEEEEET
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------------HHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence 3467899999999999999999985 57799998654321 14699999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+ .+|||||||+||+|.+++++. ..+++..++.|+.||+.||+|||++|||||||||+||||
T Consensus 123 ~--------------~~~ivmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl 183 (336)
T 4g3f_A 123 P--------------WVNIFMELLEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 183 (336)
T ss_dssp T--------------EEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE
T ss_pred C--------------EEEEEEeccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE
Confidence 6 679999999999999999862 469999999999999999999999999999999999999
Q ss_pred ccccccCCCCC-eEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 958 DLERKKADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 958 d~~~~~~~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
+.+ + .+||+|||+|+.+....... ........+||+.|||||++.+ ..|+.++|||||||++|
T Consensus 184 ~~~-------g~~vKl~DFGla~~~~~~~~~~-----~~~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvily 247 (336)
T 4g3f_A 184 SSD-------GSRAALCDFGHALCLQPDGLGK-----SLLTGDYIPGTETHMAPEVVMG----KPCDAKVDIWSSCCMML 247 (336)
T ss_dssp CTT-------SCCEEECCCTTCEEC-----------------CCCCCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHH
T ss_pred eCC-------CCEEEEeeCCCCeEccCCCccc-----ceecCCccccCccccCHHHHCC----CCCCcHHHHHHHHHHHH
Confidence 877 4 59999999998765422111 0011234579999999999986 57899999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
||+||+.||.+.+..++...|.....+.. . ....+++++.+||.+||+.||.+||
T Consensus 248 emltG~~Pf~~~~~~~~~~~i~~~~~~~~--~-----------------------~~~~~s~~~~~li~~~L~~dP~~R~ 302 (336)
T 4g3f_A 248 HMLNGCHPWTQYFRGPLCLKIASEPPPIR--E-----------------------IPPSCAPLTAQAIQEGLRKEPVHRA 302 (336)
T ss_dssp HHHHSSCSSTTTCCSCCHHHHHHSCCGGG--G-----------------------SCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHCcCCCCCCCHHHHHHHHHcCCCCch--h-----------------------cCccCCHHHHHHHHHHccCCHhHCc
Confidence 99999999988776666666655432110 0 0014566799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001152 1117 TAGDLYEMFVA 1127 (1137)
Q Consensus 1117 Sa~EVL~~L~~ 1127 (1137)
|+.|++++++.
T Consensus 303 sa~el~~~l~~ 313 (336)
T 4g3f_A 303 SAMELRRKVGK 313 (336)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999887654
No 13
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-46 Score=437.77 Aligned_cols=292 Identities=16% Similarity=0.201 Sum_probs=215.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
++|++.+.||+|+||+||+|++. +..||||+.. .........+ ++++|+.+|+.++|||||++++++.....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~--~~~~~~~~~~----~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 127 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIP--NAFDVVTNAK----RTLRELKILKHFKHDNIIAIKDILRPTVP 127 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEET--TTTSSHHHHH----HHHHHHHHHHHCCCTTBCCEEEECCCSSC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEEC--ccccchHHHH----HHHHHHHHHHhcCCCCcceEeeeeecccc
Confidence 47999999999999999999985 5778888753 3323233333 34899999999999999999999876432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
+ ....++|||||||+ |+|.+++.. ...+++..++.|++||+.||+|||++|||||||||+|||++.
T Consensus 128 ~--------~~~~~~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~ 193 (398)
T 4b99_A 128 Y--------GEFKSVYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE 193 (398)
T ss_dssp T--------TTCCCEEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred c--------ccCCEEEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCC
Confidence 2 11236899999996 789999865 357999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+|+.+...... ........+||+.|||||++.+ ...|+.++||||+||++|||+
T Consensus 194 ~-------~~~Ki~DFGla~~~~~~~~~------~~~~~~~~~GT~~Y~APEv~~~---~~~~~~~~DiWSlG~il~ell 257 (398)
T 4b99_A 194 N-------CELKIGDFGMARGLCTSPAE------HQYFMTEYVATRWYRAPELMLS---LHEYTQAIDLWSVGCIFGEML 257 (398)
T ss_dssp T-------CCEEECCCTTCBCC-------------CCCCCSSCCCCTTCCHHHHTT---CSCCCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeecceeeecccCccc------cccccccceeChHhcCHHHhcC---CCCCCChhheehhHHHHHHHH
Confidence 7 78999999999865432111 0112235689999999999875 246799999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCC---CCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGS---GFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|++||.+.+..+....|...........+................ ...........++++.+||.+||+.||.+||
T Consensus 258 ~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ 337 (398)
T 4b99_A 258 ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARI 337 (398)
T ss_dssp HTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSC
T ss_pred HCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCc
Confidence 9999999998888887774432211111111000000000000000 0011111224567899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001152 1117 TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~ 1129 (1137)
|++|+++|+|+..
T Consensus 338 ta~e~L~Hp~f~~ 350 (398)
T 4b99_A 338 SAAAALRHPFLAK 350 (398)
T ss_dssp CHHHHTTSGGGTT
T ss_pred CHHHHhcCHhhCc
Confidence 9999999999975
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.3e-46 Score=433.91 Aligned_cols=263 Identities=23% Similarity=0.367 Sum_probs=209.6
Q ss_pred CCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC-CCcceeee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH-SCIVEMYG 872 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~H-pNIVkllg 872 (1137)
.++|++.++||+|+||+||+|++.+ ..||||+.. .. ....+.+. +.+|+.+|+++.| ||||++++
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~--~~-~~~~~~~~----~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK--EG-ATHSEHRA----LMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEEC--TT-CCHHHHHH----HHHHHHHHHHHCCCTTBCCEEE
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEc--cc-cChHHHHH----HHHHHHHHHHcCCCCcEEEEEE
Confidence 4679999999999999999999743 347777643 22 12333334 4899999999975 99999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHH
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVELH 941 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-----------~~~~ls~~~i~~I~~QIa~gL~yLH 941 (1137)
++.+.+. .++||||||++|+|.++|+..... ....+++..+..|+.|||+||+|||
T Consensus 136 ~~~~~~~-------------~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH 202 (353)
T 4ase_A 136 ACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 202 (353)
T ss_dssp EECCTTS-------------CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-------------EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh
Confidence 9875431 459999999999999999864321 1345899999999999999999999
Q ss_pred hCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCC
Q 001152 942 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1021 (1137)
Q Consensus 942 s~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1021 (1137)
+++||||||||+|||++.+ +.+||+|||+|+......... ......||+.|||||++.+ ..
T Consensus 203 ~~~iiHRDLK~~NILl~~~-------~~vKi~DFGlar~~~~~~~~~--------~~~~~~gt~~ymAPE~l~~----~~ 263 (353)
T 4ase_A 203 SRKCIHRDLAARNILLSEK-------NVVKICDFGLARDIYKDPDYV--------RKGDARLPLKWMAPETIFD----RV 263 (353)
T ss_dssp HTTCCCSCCSGGGEEECGG-------GCEEECCCGGGSCTTTCTTSE--------EETTEEECGGGCCHHHHHH----CC
T ss_pred hCCeecCccCccceeeCCC-------CCEEECcchhhhhcccCCCce--------eeccccccccccCHHHHhc----CC
Confidence 9999999999999999988 789999999998654322110 1123468999999999986 57
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCC-HHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHH
Q 001152 1022 YGLEVDIWSYGCLLLELLT-LQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1099 (1137)
Q Consensus 1022 ~s~ksDVWSLGviL~ELLT-G~~Pf~~~~-~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1137)
|+.++|||||||++|||+| |+.||.+.. ...+...+..+.++..+. .++++
T Consensus 264 y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~---------------------------~~~~~ 316 (353)
T 4ase_A 264 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD---------------------------YTTPE 316 (353)
T ss_dssp CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCT---------------------------TCCHH
T ss_pred CCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCc---------------------------cCCHH
Confidence 8999999999999999998 899998765 345556666666544332 34456
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1100 LVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1100 L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
+.+++.+||+.||++||||.||++||...-
T Consensus 317 ~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 317 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 999999999999999999999999987653
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.4e-46 Score=421.30 Aligned_cols=267 Identities=25% Similarity=0.290 Sum_probs=199.5
Q ss_pred CceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCCCCC
Q 001152 803 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 882 (1137)
Q Consensus 803 ~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~~~~ 882 (1137)
+|.+.++||+|+||+||+|++.++.||||+.... ..+.+ ....|+..+.+++|||||++++++.+++.
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~-------~~~~~--~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~--- 71 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERSW--FREAEIYQTVMLRHENILGFIAADNKDNG--- 71 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGG-------GHHHH--HHHHHHHTSTTCCCTTBCCEEEEEEEECS---
T ss_pred EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc-------chhhH--HHHHHHHHHhcCCCCCCCcEEEEEEecCC---
Confidence 5789999999999999999999999999985322 11111 12456777788999999999999986531
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeccCCCCC
Q 001152 883 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRDIKSEN 954 (1137)
Q Consensus 883 ~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~--------gIIHrDLKP~N 954 (1137)
...++|||||||++|+|.++++. ..+++..+.+|+.|++.||+|||++ +||||||||+|
T Consensus 72 -------~~~~~~lV~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~N 138 (303)
T 3hmm_A 72 -------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 138 (303)
T ss_dssp -------SSEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGG
T ss_pred -------CceEEEEEecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCccc
Confidence 12367999999999999999976 3589999999999999999999987 99999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccC--CCCCCchhhHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK--PNLYGLEVDIWSYG 1032 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~~s~ksDVWSLG 1032 (1137)
||++.+ +.+||+|||+|+.......... ......+||+.|||||++.+... ...++.++||||||
T Consensus 139 ILl~~~-------~~~Ki~DFGla~~~~~~~~~~~------~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~G 205 (303)
T 3hmm_A 139 ILVKKN-------GTCCIADLGLAVRHDSATDTID------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 205 (303)
T ss_dssp EEECTT-------SCEEECCCTTCEEEETTTTEES------CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHH
T ss_pred EEECCC-------CCEEEEeCCCCccccCCCCcee------eecccccccccccCHHHhcccccccCCccChhHhhhhHH
Confidence 999988 7899999999986654322110 11224579999999999975211 12367899999999
Q ss_pred HHHHHHHhCCCCCCCCC---------------HHHHHHHHH-cCCCCCchhHHhhhcccccccccccCCCCCCchhhhhh
Q 001152 1033 CLLLELLTLQVPYMGLS---------------ELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET 1096 (1137)
Q Consensus 1033 viL~ELLTG~~Pf~~~~---------------~~el~~~I~-~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1137)
|++|||+||..||.... ..++...+. ...+|.++... ....+
T Consensus 206 vvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~----------------------~~~~~ 263 (303)
T 3hmm_A 206 LVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QSCEA 263 (303)
T ss_dssp HHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG----------------------GSSHH
T ss_pred HHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccc----------------------cchHH
Confidence 99999999977664211 122222221 12222222211 11255
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1097 LSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1097 ~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
++.+.+|+.+||+.||++||||.||++.|....
T Consensus 264 ~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 264 LRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 677999999999999999999999999987654
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.9e-46 Score=421.95 Aligned_cols=277 Identities=23% Similarity=0.289 Sum_probs=193.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||+||+|++. +..||+|+..... .....+ ++.+|+.+|++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~----~~~~E~~il~~l~HpnIV~~~~~~~~~~~ 77 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELARE----KVMREVKALAKLEHPGIVRYFNAWLEKNT 77 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHH----HHHHHHHHHTTCCCTTBCCEEEEEEEEC-
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHH----HHHHHHHHHHhCCCCCCCeEEEEEEecCc
Confidence 46899999999999999999985 5778888754332 122223 45899999999999999999999876441
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
.... ........+|+|||||+||+|.++++.. ......++..++.|+.||+.||+|||++|||||||||+|||++.
T Consensus 78 ~~~~--~~~~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~ 153 (299)
T 4g31_A 78 TEKL--QPSSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM 153 (299)
T ss_dssp -----------CEEEEEEEECCCSCCHHHHHHTC--CSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred cccc--cccCCCcEEEEEEecCCCCcHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECC
Confidence 1000 0001122579999999999999999762 11224567788999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccc--cCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA--HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~--~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+ +.+||+|||+|+............ ..........+||+.|||||++.+ ..|+.++|||||||++||
T Consensus 154 ~-------~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvilye 222 (299)
T 4g31_A 154 D-------DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG----NSYSHKVDIFSLGLILFE 222 (299)
T ss_dssp T-------CCEEECCCCCC--------------------------CCCTTSCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred C-------CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcC----CCCCCHHHHHHHHHHHHH
Confidence 7 789999999998765432111000 000011234579999999999976 578999999999999999
Q ss_pred HHhCCCCCCCCCH-HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1038 LLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~-~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
|++ ||..... ......+.....|. .+ ....+.+.+|+.+||+.||.+||
T Consensus 223 ll~---Pf~~~~~~~~~~~~~~~~~~p~---~~------------------------~~~~~~~~~li~~~L~~dP~~Rp 272 (299)
T 4g31_A 223 LLY---PFSTQMERVRTLTDVRNLKFPP---LF------------------------TQKYPCEYVMVQDMLSPSPMERP 272 (299)
T ss_dssp HHS---CCSSHHHHHHHHHHHHTTCCCH---HH------------------------HHHCHHHHHHHHHHTCSSGGGSC
T ss_pred Hcc---CCCCccHHHHHHHHHhcCCCCC---CC------------------------cccCHHHHHHHHHHcCCChhHCc
Confidence 996 7864221 12223333332221 11 13334578899999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|+.|+++|+|+..-
T Consensus 273 s~~eil~h~~~~~~ 286 (299)
T 4g31_A 273 EAINIIENAVFEDL 286 (299)
T ss_dssp CHHHHHTSGGGCCC
T ss_pred CHHHHhcCHhhCCC
Confidence 99999999999753
No 17
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.6e-44 Score=438.97 Aligned_cols=261 Identities=21% Similarity=0.268 Sum_probs=216.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
+++|++.+.||+|+||+||+|++. +..+|+|+..... ..+.+ .+.+|+.+|+.++|||||+++++|.+..
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~----~~~~Ei~il~~l~hpnIv~l~~~~~~~~ 227 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKE----TVRKEIQTMSVLRHPTLVNLHDAFEDDN 227 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHH----HHHHHHHHHHHTCCTTBCCEEEEEECSS
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHH----HHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 578999999999999999999985 5678888754321 22223 3488999999999999999999998766
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
++|||||||+||+|.+++.. ....+++.++..|+.||+.||+|||++||+||||||+|||++
T Consensus 228 --------------~~~iv~E~~~gg~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~ 289 (573)
T 3uto_A 228 --------------EMVMIYEFMSGGELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 289 (573)
T ss_dssp --------------EEEEEEECCCCCBHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEeecCCCcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhcccc
Confidence 67999999999999999854 134699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+. .+.+||+|||+|+.+...... ...+||+.|||||++.+ ..|+.++|||||||++|||
T Consensus 290 ~~~-----~~~vKl~DFG~a~~~~~~~~~-----------~~~~GT~~y~APEv~~~----~~y~~~~DiWSlGvilyem 349 (573)
T 3uto_A 290 TKR-----SNELKLIDFGLTAHLDPKQSV-----------KVTTGTAEFAAPEVAEG----KPVGYYTDMWSVGVLSYIL 349 (573)
T ss_dssp SSS-----CCCEEECCCSSCEECCTTSEE-----------EEECSSGGGCCHHHHTT----CCBCHHHHHHHHHHHHHHH
T ss_pred CCC-----CCCEEEeeccceeEccCCCce-----------eeeEECccccCHHHhCC----CCCCcHHHHHHHHHHHHHH
Confidence 542 267999999999876543211 13479999999999986 5789999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+.+..++...|..+........+ ...++++++||.+||+.||.+|||+
T Consensus 350 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~dli~~~L~~dp~~R~t~ 405 (573)
T 3uto_A 350 LSGLSPFGGENDDETLRNVKSCDWNMDDSAF------------------------SGISEDGKDFIRKLLLADPNTRMTI 405 (573)
T ss_dssp HHSCCSSCCSSHHHHHHHHHTTCCCCCSGGG------------------------TTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HHCCCCCCCcCHHHHHHHHHhCCCCCCcccc------------------------cCCCHHHHHHHHHHccCChhHCcCH
Confidence 9999999999999888888765532211111 1345679999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001152 1119 GDLYEMFVARTSS 1131 (1137)
Q Consensus 1119 ~EVL~~L~~~~~s 1131 (1137)
+|+++|+|+....
T Consensus 406 ~e~l~Hpw~~~~~ 418 (573)
T 3uto_A 406 HQALEHPWLTPGN 418 (573)
T ss_dssp HHHHHSTTTSCCC
T ss_pred HHHhcCcCcCCCC
Confidence 9999999998543
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.3e-44 Score=414.60 Aligned_cols=286 Identities=20% Similarity=0.177 Sum_probs=199.9
Q ss_pred CCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEe
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 875 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~ 875 (1137)
++|++.++||+|+||+||+|++. +..||+|+.. ... .. .++.+|+++|+.+ +|||||+++++|.
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~--~~~----~~----~~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLI--PTS----HP----IRIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEEC--TTS----CH----HHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEc--ccc----CH----HHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 46999999999999999999863 3567777642 211 11 1347899999998 5999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+.+ +.|+||||++||+|.++++ .+++.+++.|+.||+.||+|||++|||||||||+||
T Consensus 91 ~~~--------------~~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNi 148 (361)
T 4f9c_A 91 KND--------------HVVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNF 148 (361)
T ss_dssp ETT--------------EEEEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred ECC--------------EEEEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHe
Confidence 776 6799999999999999884 389999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCcccccccccccccc------------------ccCCCCCCCcccCCCcccchhhhcccc
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI------------------AHRGIPAPDVCVGTPRWMAPEVLRAMH 1017 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~------------------~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1017 (1137)
|++.+. +.+||+|||+|+........... ...........+||+.|||||++.+
T Consensus 149 Ll~~~~------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 220 (361)
T 4f9c_A 149 LYNRRL------KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK-- 220 (361)
T ss_dssp EEETTT------TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTT--
T ss_pred EEeCCC------CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcC--
Confidence 998652 57999999999755432110000 0000011224579999999999975
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCC---------------------CCc--hhHHhhhc
Q 001152 1018 KPNLYGLEVDIWSYGCLLLELLTLQVPYMG-LSELEIHDLIQMGKR---------------------PRL--TDELEALG 1073 (1137)
Q Consensus 1018 ~~~~~s~ksDVWSLGviL~ELLTG~~Pf~~-~~~~el~~~I~~g~~---------------------p~l--~~~l~~~~ 1073 (1137)
...|+.++||||+||++|||++|+.||.. .+..+....|..... +.. ........
T Consensus 221 -~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 299 (361)
T 4f9c_A 221 -CPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLR 299 (361)
T ss_dssp -CSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC
T ss_pred -CCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhc
Confidence 24689999999999999999999999954 444444444422110 000 00000000
Q ss_pred ccccccccc----cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1074 SCHEHEVAQ----SGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1074 ~~~~~~~~~----~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
.. ...... ..............++++++|+.+||+.||++|||++|+++|+|++.
T Consensus 300 ~~-~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 300 GM-DSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp -----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred cc-cccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 00 000000 00000000111245677999999999999999999999999999974
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.1e-44 Score=438.64 Aligned_cols=261 Identities=21% Similarity=0.262 Sum_probs=207.6
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
+.++++|++.++||+|+||+||+|++. +..||+|+........ ............++.+++.++|||||+++++|.
T Consensus 185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~--~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~ 262 (689)
T 3v5w_A 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQGETLALNERIMLSLVSTGDCPFIVCMSYAFH 262 (689)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE
T ss_pred CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch--hhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE
Confidence 557899999999999999999999985 5778999864332110 000111011134467778889999999999999
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+.+ .+|||||||+||+|.++|.+ ...+++..++.|+.||+.||+|||++|||||||||+||
T Consensus 263 ~~~--------------~lylVmEy~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNI 323 (689)
T 3v5w_A 263 TPD--------------KLSFILDLMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323 (689)
T ss_dssp CSS--------------EEEEEECCCCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGE
T ss_pred ECC--------------EEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHe
Confidence 876 67999999999999999986 24699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
||+.+ +.+||+|||+|+...... ....+||+.|||||++.. ...|+.++|||||||++
T Consensus 324 Lld~~-------G~vKL~DFGlA~~~~~~~------------~~t~~GTp~YmAPEvl~~---~~~y~~~vDiWSLGvil 381 (689)
T 3v5w_A 324 LLDEH-------GHVRISDLGLACDFSKKK------------PHASVGTHGYMAPEVLQK---GVAYDSSADWFSLGCML 381 (689)
T ss_dssp EECTT-------SCEEECCCTTCEECSSCC------------CCSCCSCGGGCCHHHHST---TCCCCTHHHHHHHHHHH
T ss_pred EEeCC-------CCEEecccceeeecCCCC------------CCCccCCcCccCHHHHhC---CCCCCcHHHHHHHHHHH
Confidence 99988 889999999998654321 124579999999999963 24689999999999999
Q ss_pred HHHHhCCCCCCCC---CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1036 LELLTLQVPYMGL---SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~---~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
|||++|..||.+. ...++...+..... .++. ..++++++||.+||+.||
T Consensus 382 YEmLtG~~PF~~~~~~~~~~i~~~i~~~~~-~~p~---------------------------~~S~~a~dLI~~lL~~dP 433 (689)
T 3v5w_A 382 FKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-ELPD---------------------------SFSPELRSLLEGLLQRDV 433 (689)
T ss_dssp HHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHHHHHHTCSCG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHhhcCCCC-CCCc---------------------------cCCHHHHHHHHHHccCCH
Confidence 9999999999753 33344444443321 1111 345569999999999999
Q ss_pred CCCCC-----HHHHHHHHHhhc
Q 001152 1113 TERPT-----AGDLYEMFVART 1129 (1137)
Q Consensus 1113 ~~RPS-----a~EVL~~L~~~~ 1129 (1137)
.+|++ ++||++|+||+.
T Consensus 434 ~~Rl~~~~~ga~ei~~HpfF~~ 455 (689)
T 3v5w_A 434 NRRLGCLGRGAQEVKESPFFRS 455 (689)
T ss_dssp GGCTTCSSSTHHHHTTSGGGTT
T ss_pred hHCCCCCCCCHHHHhcCccccC
Confidence 99998 899999999974
No 20
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.4e-41 Score=386.33 Aligned_cols=258 Identities=24% Similarity=0.337 Sum_probs=214.3
Q ss_pred CCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
..+.+|++.+.||+|+||.||+|++ .+..||+|+..... ......+. +.+|+.+|+.++||||+++++++..
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~----~~~E~~~l~~l~hpnIv~l~~~~~~ 85 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ--LNPTSLQK----LFREVRIMKILNHPNIVKLFEVIET 85 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc--CCHHHHHH----HHHHHHHHHhCCCCCEeeEEEEEEE
Confidence 3467899999999999999999998 45789999864332 22333333 4889999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.+ ..++||||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 86 ~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIl 146 (328)
T 3fe3_A 86 EK--------------TLYLIMEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLL 146 (328)
T ss_dssp SS--------------EEEEEECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred CC--------------EEEEEEECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEE
Confidence 65 679999999999999999762 46999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||++........ .....||+.|+|||++.+. ...+.++|||||||++|
T Consensus 147 l~~~-------~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~ 205 (328)
T 3fe3_A 147 LDAD-------MNIKIADFGFSNEFTVGGK-----------LDAFCGAPPYAAPELFQGK---KYDGPEVDVWSLGVILY 205 (328)
T ss_dssp ECTT-------SCEEECSTTCCGGGSSSCG-----------GGTTSSSGGGCCHHHHHTC---CCCSHHHHHHHHHHHHH
T ss_pred EcCC-------CCEEEeeccCceecCCCCc-----------cccccCCcceeCcccccCC---CcCCchhhhhhhHHHHH
Confidence 9887 7899999999875543211 1234699999999999862 33468999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|++|..||.+.+..++...+..+.... +. ..++++.+|+.+||+.||.+||
T Consensus 206 ell~g~~pf~~~~~~~~~~~i~~~~~~~-p~---------------------------~~s~~~~~li~~~L~~dP~~R~ 257 (328)
T 3fe3_A 206 TLVSGSLPFDGQNLKELRERVLRGKYRI-PF---------------------------YMSTDCENLLKRFLVLNPIKRG 257 (328)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHCCCCC-CT---------------------------TSCHHHHHHHHHHCCSSTTTSC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCC-CC---------------------------CCCHHHHHHHHHHCCCChhHCc
Confidence 9999999999988888888776654321 11 2345589999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|++|+++|+|+...
T Consensus 258 t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 258 TLEQIMKDRWINAG 271 (328)
T ss_dssp CHHHHTTCTTTTTT
T ss_pred CHHHHhcCHhhcCC
Confidence 99999999999753
No 21
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2e-41 Score=380.54 Aligned_cols=259 Identities=25% Similarity=0.430 Sum_probs=212.1
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||+||+|.+ .+..||+|+........ .+ .+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----KE----LIINEILVMRENKNPNIVNYLDSYLVGD 90 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC----HH----HHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH----HH----HHHHHHHHHhcCCCCCCCeEeEEEEECC
Confidence 45799999999999999999987 45778888865443211 12 2378999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 91 --------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~ 150 (297)
T 3fxz_A 91 --------------ELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150 (297)
T ss_dssp --------------EEEEEEECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC
Confidence 67999999999999999976 3589999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 151 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el 209 (297)
T 3fxz_A 151 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 209 (297)
T ss_dssp TT-------CCEEECCCTTCEECCSTTC----------CBCCCCSCGGGCCHHHHHC----SCBCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeCCCceecCCccc----------ccCCccCCcCccChhhhcC----CCCCcHHHHHHHHHHHHHH
Confidence 87 7899999999876543221 1123469999999999976 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+.........+.....+.+.. ....++.+.+++.+||+.||.+|||+
T Consensus 210 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~dp~~Rps~ 264 (297)
T 3fxz_A 210 IEGEPPYLNENPLRALYLIATNGTPELQN-------------------------PEKLSAIFRDFLNRCLEMDVEKRGSA 264 (297)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHHCSCCCSC-------------------------GGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCCC-------------------------ccccCHHHHHHHHHHccCChhHCcCH
Confidence 99999999887776665554333222110 01345669999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001152 1119 GDLYEMFVARTSSSI 1133 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ss~ 1133 (1137)
+|+++|+|++...+.
T Consensus 265 ~ell~h~~~~~~~~~ 279 (297)
T 3fxz_A 265 KELLQHQFLKIAKPL 279 (297)
T ss_dssp HHHTTCGGGGGCCCG
T ss_pred HHHhhChhhcccCcc
Confidence 999999999876544
No 22
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-41 Score=380.49 Aligned_cols=259 Identities=21% Similarity=0.279 Sum_probs=213.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||+||+|.+. +..+|+|+.... ....+. +.+|+.+++.++||||+++++++.+.+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~~ 74 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVL----VKKEISILNIARHRNILHLHESFESME 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHH----HHHHHHHHHHSCCTTBCCEEEEEEETT
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHH----HHHHHHHHHhCCCCCCCeEeEEEecCC
Confidence 467999999999999999999985 466888875422 222223 478999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 75 --------------~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~ 136 (321)
T 1tki_A 75 --------------ELVMIFEFISGLDIFERINT----SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQ 136 (321)
T ss_dssp --------------EEEEEECCCCCCBHHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEEeCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc
Confidence 67999999999999999864 234699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+. .+.+||+|||++......... ....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 137 ~~~-----~~~~kl~Dfg~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l 196 (321)
T 1tki_A 137 TRR-----SSTIKIIEFGQARQLKPGDNF-----------RLLFTAPEYYAPEVHQH----DVVSTATDMWSLGTLVYVL 196 (321)
T ss_dssp SSS-----CCCEEECCCTTCEECCTTCEE-----------EEEESCGGGSCHHHHTT----CEECHHHHHHHHHHHHHHH
T ss_pred cCC-----CCCEEEEECCCCeECCCCCcc-----------ccccCChhhcCcHHhcC----CCCCchhhHHHHHHHHHHH
Confidence 631 278999999999765432211 13468999999999875 4578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+....++...+..+........+ ...++++.+|+.+||+.||.+|||+
T Consensus 197 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~Rpt~ 252 (321)
T 1tki_A 197 LSGINPFLAETNQQIIENIMNAEYTFDEEAF------------------------KEISIEAMDFVDRLLVKERKSRMTA 252 (321)
T ss_dssp HHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH------------------------TTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HhCCCCCcCCCHHHHHHHHHcCCCCCChhhh------------------------ccCCHHHHHHHHHHcCCChhHCcCH
Confidence 9999999998888888887665543222111 1345669999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
.|+++|+|+...
T Consensus 253 ~e~l~hp~~~~~ 264 (321)
T 1tki_A 253 SEALQHPWLKQK 264 (321)
T ss_dssp HHHHHSHHHHSC
T ss_pred HHHhcChhhccC
Confidence 999999999754
No 23
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=385.36 Aligned_cols=257 Identities=21% Similarity=0.305 Sum_probs=205.6
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||+||+|++ .+..||+|+....... ...+ ++.+|+.+++.++||||+++++++.+.+
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~----~~~~Ei~~l~~l~hpnIv~l~~~~~~~~ 81 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLP----RIKTEIEALKNLRHQHICQLYHVLETAN 81 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CC----HHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHH----HHHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence 46799999999999999999997 4577999986433221 1222 3478999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 82 --------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~ 142 (347)
T 3zgw_A 82 --------------KIFMVLEYCPGGELFDYIIS-----QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD 142 (347)
T ss_dssp --------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC
T ss_pred --------------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEc
Confidence 67999999999999999976 24699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++........ .......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 143 ~~-------~~~kL~DFG~a~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlG~il~el 203 (347)
T 3zgw_A 143 EY-------HKLKLIDFGLCAKPKGNKD---------YHLQTCCGSLAYAAPELIQG---KSYLGSEADVWSMGILLYVL 203 (347)
T ss_dssp TT-------SCEEECCCTTCBC-----------------------CGGGCCHHHHTT---C---CCHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEeccCcccccCCCC---------ccccccCCccCccCHHHHcC---CCCCCcHhHHHHHHHHHHHH
Confidence 77 7899999999875433211 11124469999999999975 23358999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+.+..++...+..+.... +. ..++++.+|+.+||+.||.+|||+
T Consensus 204 l~g~~Pf~~~~~~~~~~~i~~~~~~~-p~---------------------------~~s~~~~~li~~~L~~dP~~Rps~ 255 (347)
T 3zgw_A 204 MCGFLPFDDDNVMALYKKIMRGKYDV-PK---------------------------WLSPSSILLLQQMLQVDPKKRISM 255 (347)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHTCCCC-CT---------------------------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHCCCCCCCCCHHHHHHHHHcCCCCC-CC---------------------------CCCHHHHHHHHHHcccCHhHCcCH
Confidence 99999999988888888876654321 11 234458899999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
+|+++|+|+...
T Consensus 256 ~eil~hp~~~~~ 267 (347)
T 3zgw_A 256 KNLLNHPWIMQD 267 (347)
T ss_dssp HHHHTCHHHHTT
T ss_pred HHHhcCcchhcC
Confidence 999999999753
No 24
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.6e-41 Score=386.97 Aligned_cols=265 Identities=22% Similarity=0.275 Sum_probs=214.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
+.|++.+.||+|+||+||+|++. +..+|+|+........... ......+.+|+.+|++++||||+++++++.+..
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 88 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR--GVCREEIEREVSILRQVLHPNIITLHDVYENRT- 88 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSS--SBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccc--hhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC-
Confidence 46999999999999999999985 5779999865443221110 001123478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||++||+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 89 -------------~~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~ 150 (361)
T 2yab_A 89 -------------DVVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150 (361)
T ss_dssp -------------EEEEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred -------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeC
Confidence 67999999999999999864 346999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
++ .....+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 151 ~~---~~~~~vkl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~~ll 212 (361)
T 2yab_A 151 KN---IPIPHIKLIDFGLAHEIEDGVE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYILL 212 (361)
T ss_dssp TT---SSSCCEEECCCSSCEECCTTCC-----------CCCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CC---CCccCEEEEecCCceEcCCCCc-----------cccCCCCccEECchHHcC----CCCCccccHHHHHHHHHHHH
Confidence 62 1113799999999976543211 123469999999999875 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+.+..+....+..+........+ ...++++.+||.+||+.||.+|||+.
T Consensus 213 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dP~~R~t~~ 268 (361)
T 2yab_A 213 SGASPFLGDTKQETLANITAVSYDFDEEFF------------------------SQTSELAKDFIRKLLVKETRKRLTIQ 268 (361)
T ss_dssp HSCCSSCCSSHHHHHHHHHTTCCCCCHHHH------------------------TTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHhcCCCCCchhc------------------------cCCCHHHHHHHHHHCCCChhHCcCHH
Confidence 999999998888888888765532211111 13456699999999999999999999
Q ss_pred HHHHHHHhhc
Q 001152 1120 DLYEMFVART 1129 (1137)
Q Consensus 1120 EVL~~L~~~~ 1129 (1137)
|+++|+|+..
T Consensus 269 e~l~hp~~~~ 278 (361)
T 2yab_A 269 EALRHPWITP 278 (361)
T ss_dssp HHHTSTTTSC
T ss_pred HHhcCcCcCC
Confidence 9999999974
No 25
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2e-40 Score=380.31 Aligned_cols=257 Identities=23% Similarity=0.318 Sum_probs=211.6
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
++.+|++.+.||+|+||.||+|++. +..+|+|+...... ........+.+|+.+++.++||||+++++++.+.
T Consensus 3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 77 (337)
T 1o6l_A 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-----IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH 77 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS
T ss_pred ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-----hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC
Confidence 4678999999999999999999985 57799998643311 0111122347899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+ ..|+||||++||+|..++.. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 78 ~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll 138 (337)
T 1o6l_A 78 D--------------RLCFVMEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138 (337)
T ss_dssp S--------------EEEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE
T ss_pred C--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE
Confidence 5 67999999999999999976 2468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++||
T Consensus 139 ~~~-------g~vkL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~e 197 (337)
T 1o6l_A 139 DKD-------GHIKITDFGLCKEGISDGA----------TMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYE 197 (337)
T ss_dssp CTT-------SCEEECCCTTCBCSCCTTC----------CBCCCEECGGGCCGGGGSS----SCBCTTHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeeccchhhcccCCC----------cccccccChhhCChhhhcC----CCCCchhhcccchhHHHH
Confidence 987 7899999999875332111 1124579999999999875 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP- 1116 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP- 1116 (1137)
|++|..||.+.+..++...+...... ++. ..++++.+||.+||+.||.+||
T Consensus 198 ll~g~~Pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~li~~lL~~dP~~R~g 249 (337)
T 1o6l_A 198 MMCGRLPFYNQDHERLFELILMEEIR-FPR---------------------------TLSPEAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSSTTTSTT
T ss_pred HhcCCCCCCCCCHHHHHHHHHcCCCC-CCC---------------------------CCCHHHHHHHHHHhhcCHHHhcC
Confidence 99999999988888777777554321 111 2345699999999999999999
Q ss_pred ----CHHHHHHHHHhhc
Q 001152 1117 ----TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 ----Sa~EVL~~L~~~~ 1129 (1137)
+++||++|+|+..
T Consensus 250 ~~~~~~~ei~~h~~f~~ 266 (337)
T 1o6l_A 250 GGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp CSTTTHHHHHTSGGGTT
T ss_pred CCCCCHHHHHcCCCcCC
Confidence 9999999999864
No 26
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=9.7e-41 Score=385.34 Aligned_cols=259 Identities=24% Similarity=0.301 Sum_probs=208.7
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeE
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 874 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~ 874 (1137)
...+.+|++.+.||+|+||+||+|++. +..+|+|+...... ........+.+|+.+++.+ +||||+++++++
T Consensus 19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~ 93 (353)
T 3txo_A 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-----LQDDDVECTMTEKRILSLARNHPFLTQLFCCF 93 (353)
T ss_dssp ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-----cchhHHHHHHHHHHHHHhccCCCceeeEEEEE
Confidence 345789999999999999999999985 56789998653311 1111122347899999988 599999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+.+ ..|+||||++||+|.+++... ..+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 94 ~~~~--------------~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N 154 (353)
T 3txo_A 94 QTPD--------------RLFFVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDN 154 (353)
T ss_dssp ECSS--------------EEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred EeCC--------------EEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHH
Confidence 8766 679999999999999999762 469999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 155 ILl~~~-------g~ikL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 213 (353)
T 3txo_A 155 VLLDHE-------GHCKLADFGMCKEGICNGV----------TTATFCGTPDYIAPEILQE----MLYGPAVDWWAMGVL 213 (353)
T ss_dssp EEECTT-------SCEEECCCTTCBCSCC-------------------CCGGGCCHHHHHH----HHCTTHHHHHHHHHH
T ss_pred EEECCC-------CCEEEccccceeecccCCc----------cccccCCCcCeEChhhcCC----CCcCCccCCCcchHH
Confidence 999987 7899999999875332111 1124579999999999976 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|||++|..||.+.+..++...+..+.... +. ..++++.+|+.+||+.||.+
T Consensus 214 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~~-p~---------------------------~~~~~~~~li~~lL~~dP~~ 265 (353)
T 3txo_A 214 LYEMLCGHAPFEAENEDDLFEAILNDEVVY-PT---------------------------WLHEDATGILKSFMTKNPTM 265 (353)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-CT---------------------------TSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-CC---------------------------CCCHHHHHHHHHHhhhCHHH
Confidence 999999999999999888888886654321 11 23345899999999999999
Q ss_pred CCCH------HHHHHHHHhhc
Q 001152 1115 RPTA------GDLYEMFVART 1129 (1137)
Q Consensus 1115 RPSa------~EVL~~L~~~~ 1129 (1137)
||++ +||++|+|+..
T Consensus 266 R~~~~~~~~~~~il~hp~f~~ 286 (353)
T 3txo_A 266 RLGSLTQGGEHAILRHPFFKE 286 (353)
T ss_dssp STTSGGGTCTHHHHTSGGGTT
T ss_pred ccCCcccCCHHHHhhCCcccC
Confidence 9998 99999999974
No 27
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.2e-40 Score=381.00 Aligned_cols=260 Identities=25% Similarity=0.307 Sum_probs=213.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|.+. +..+|+|+..... ......+. +.+|+.+++.++|||||++++++.+.+
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~----~~~E~~il~~l~hpnIv~~~~~~~~~~- 101 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDFQK----LEREARICRKLQHPNIVRLHDSIQEES- 101 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEccc--CCHHHHHH----HHHHHHHHHhCCCCCCCeEEEEEEeCC-
Confidence 46999999999999999999985 5678888864332 23333344 488999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 102 -------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~ 163 (362)
T 2bdw_A 102 -------------FHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 163 (362)
T ss_dssp -------------EEEEEECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESC
T ss_pred -------------EEEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEec
Confidence 67999999999999998865 346999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+. ..+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 164 ~~----~~~~~kl~DfG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~ll 224 (362)
T 2bdw_A 164 KA----KGAAVKLADFGLAIEVNDSEA-----------WHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYILL 224 (362)
T ss_dssp SS----TTCCEEECCCTTCBCCTTCCS-----------CCCSCSCTTTCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEeecCcceEecCCcc-----------cccCCCCccccCHHHHcc----CCCCchhhHHHHHHHHHHHH
Confidence 52 125699999999876543211 123469999999999875 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+.+..++...+..+........+ ...++++.+|+.+||+.||.+|||+.
T Consensus 225 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~R~t~~ 280 (362)
T 2bdw_A 225 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEW------------------------DTVTPEAKSLIDSMLTVNPKKRITAD 280 (362)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCTTGG------------------------GGSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHhCCCCCCcccc------------------------cCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 999999998888888887665532211111 13456699999999999999999999
Q ss_pred HHHHHHHhhc
Q 001152 1120 DLYEMFVART 1129 (1137)
Q Consensus 1120 EVL~~L~~~~ 1129 (1137)
|+++|+|+..
T Consensus 281 e~l~hp~~~~ 290 (362)
T 2bdw_A 281 QALKVPWICN 290 (362)
T ss_dssp HHTTSHHHHT
T ss_pred HHhcCcccCC
Confidence 9999999864
No 28
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.1e-40 Score=373.33 Aligned_cols=288 Identities=19% Similarity=0.228 Sum_probs=209.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
.-..+|++.++||+|+||+||+|++. +..+|+|+...... .. .....+.+|+.++++++||||+++++++.+.
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 91 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DE----GIPSTAIREISLLKELHHPNIVSLIDVIHSE 91 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--cc----hhhHHHHHHHHHHHHcCCCCEeeeeeEEccC
Confidence 34678999999999999999999984 57789998643321 11 1122347899999999999999999999866
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
. ..++||||++ ++|.+++.. ....+++..+..|+.||+.||+|||++||+||||||+|||+
T Consensus 92 ~--------------~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~ 152 (311)
T 3niz_A 92 R--------------CLTLVFEFME-KDLKKVLDE----NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI 152 (311)
T ss_dssp S--------------CEEEEEECCS-EEHHHHHHT----CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred C--------------EEEEEEcCCC-CCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE
Confidence 5 5699999997 688888865 23469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 153 ~~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~ 212 (311)
T 3niz_A 153 NSD-------GALKLADFGLARAFGIPVR----------SYTHEVVTLWYRAPDVLMG---SKKYSTSVDIWSIGCIFAE 212 (311)
T ss_dssp CTT-------CCEEECCCTTCEETTSCCC-------------CCCCCCTTCCHHHHTT---CCSCCTHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEccCcCceecCCCcc----------cccCCcccCCcCCHHHhcC---CCCCCchHHhHHHHHHHHH
Confidence 987 7899999999976543211 1123468999999999875 2467899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhccccc--ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE--HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|++|+.||.+....+....+........+..+........ ....+..............++++.+|+.+||+.||.+|
T Consensus 213 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 292 (311)
T 3niz_A 213 MITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKR 292 (311)
T ss_dssp HHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTS
T ss_pred HHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHC
Confidence 9999999987665555444422111111111111000000 00000000000111122456779999999999999999
Q ss_pred CCHHHHHHHHHhhcCC
Q 001152 1116 PTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~s 1131 (1137)
||++|+++|+|++.-.
T Consensus 293 pt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 293 ISARDAMNHPYFKDLD 308 (311)
T ss_dssp CCHHHHHTSGGGTTSC
T ss_pred CCHHHHhcCcccccCC
Confidence 9999999999998643
No 29
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-40 Score=374.37 Aligned_cols=255 Identities=24% Similarity=0.325 Sum_probs=211.8
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
.++.+|++.+.||+|+||.||+|+.. +..+|+|+...... ........+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 77 (318)
T 1fot_A 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-----VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 77 (318)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC
T ss_pred CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe
Confidence 35678999999999999999999985 57789998643211 000111234789999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.. ..|+||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 78 ~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl 138 (318)
T 1fot_A 78 AQ--------------QIFMIMDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENIL 138 (318)
T ss_dssp SS--------------EEEEEECCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEE
T ss_pred CC--------------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEE
Confidence 65 67999999999999999976 346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||+++...... ....||+.|+|||++.+ ..++.++|||||||++|
T Consensus 139 l~~~-------g~~kL~Dfg~a~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ 194 (318)
T 1fot_A 139 LDKN-------GHIKITDFGFAKYVPDVT-------------YTLCGTPDYIAPEVVST----KPYNKSIDWWSFGILIY 194 (318)
T ss_dssp ECTT-------SCEEECCCSSCEECSSCB-------------CCCCSCTTTCCHHHHTT----CCBCTTHHHHHHHHHHH
T ss_pred EcCC-------CCEEEeecCcceecCCcc-------------ccccCCccccCHhHhcC----CCCCcccchhhhHHHHH
Confidence 9877 789999999997643311 13469999999999875 56889999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
||++|..||.+.+..+....+...... ++. ..++++.+++.+||+.||.+||
T Consensus 195 ell~g~~pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~~~~~~~li~~lL~~dp~~R~ 246 (318)
T 1fot_A 195 EMLAGYTPFYDSNTMKTYEKILNAELR-FPP---------------------------FFNEDVKDLLSRLITRDLSQRL 246 (318)
T ss_dssp HHHHSSCTTCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSCTTTCT
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCC-CCC---------------------------CCCHHHHHHHHHHhccCHHHcC
Confidence 999999999988888877777654321 111 2345699999999999999999
Q ss_pred -----CHHHHHHHHHhhc
Q 001152 1117 -----TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 -----Sa~EVL~~L~~~~ 1129 (1137)
+++||++|+|+..
T Consensus 247 ~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 247 GNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp TSSTTTTHHHHTSGGGSS
T ss_pred CCcCCCHHHHhcCccccC
Confidence 9999999999964
No 30
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.2e-40 Score=363.36 Aligned_cols=258 Identities=25% Similarity=0.295 Sum_probs=210.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
-.+.+|++.+.||+|+||.||+|.+.. ..+|+|+.... ..........+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-----QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD 80 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHH-----HHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecc-----ccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec
Confidence 356789999999999999999999864 56888875432 11222233456889999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.. ..++||||+++++|.+++... ..+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 81 ~~--------------~~~lv~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nil 141 (279)
T 3fdn_A 81 AT--------------RVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 141 (279)
T ss_dssp SS--------------EEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEE
T ss_pred CC--------------EEEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEE
Confidence 65 679999999999999999762 45899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++||||||+++|
T Consensus 142 i~~~-------~~~~l~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~ 198 (279)
T 3fdn_A 142 LGSA-------GELKIADFGWSVHAPSSR------------RTDLCGTLDYLPPEMIEG----RMHDEKVDLWSLGVLCY 198 (279)
T ss_dssp ECTT-------SCEEECSCCEESCC--------------------CCCCTTCCHHHHTT----CCCCTTHHHHHHHHHHH
T ss_pred EcCC-------CCEEEEeccccccCCccc------------ccccCCCCCccCHhHhcc----CCCCccchhHhHHHHHH
Confidence 9877 789999999885443221 113468999999999875 56789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|++|..||......+....+....... +. ..++.+.+|+.+||+.||.+||
T Consensus 199 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~li~~~l~~~p~~Rp 250 (279)
T 3fdn_A 199 EFLVGKPPFEANTYQETYKRISRVEFTF-PD---------------------------FVTEGARDLISRLLKHNPSQRP 250 (279)
T ss_dssp HHHHSSCTTCCSSHHHHHHHHHHTCCCC-CT---------------------------TSCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHCCCCCCCCcHHHHHHHHHhCCCCC-CC---------------------------cCCHHHHHHHHHHhccChhhCC
Confidence 9999999999888777777665433211 10 2345589999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001152 1117 TAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~s 1131 (1137)
|++||++|+|+...+
T Consensus 251 s~~e~l~h~~~~~~~ 265 (279)
T 3fdn_A 251 MLREVLEHPWITANS 265 (279)
T ss_dssp CHHHHHHCHHHHHHC
T ss_pred CHHHHhhCccccCCc
Confidence 999999999998643
No 31
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.4e-40 Score=371.43 Aligned_cols=261 Identities=27% Similarity=0.449 Sum_probs=205.1
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
...+|++.+.||+|+||+||+|++.+..+|+|+.... .......+. +.+|+.++++++||||+++++++.+..
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~~- 107 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQ--DFHAERVNE----FLREVAIMKRLRHPNIVLFMGAVTQPP- 107 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCC--CCSHHHHHH----HHHHHHHHHHCCCTTBCCEEEEECSTT-
T ss_pred ChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCC--CCCHHHHHH----HHHHHHHHHhCCCCCEeeEEEEEEECC-
Confidence 4578999999999999999999999999999986432 223333344 488999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeEe
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENILI 957 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~g--IIHrDLKP~NILl 957 (1137)
..++||||+++++|.+++..... ...+++..++.|+.||+.||+|||++| |+||||||+|||+
T Consensus 108 -------------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll 172 (309)
T 3p86_A 108 -------------NLSIVTEYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV 172 (309)
T ss_dssp -------------CCEEEEECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE
T ss_pred -------------ceEEEEecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE
Confidence 45999999999999999975211 124999999999999999999999999 9999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 173 ~~~-------~~~kL~Dfg~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~e 231 (309)
T 3p86_A 173 DKK-------YTVKVCDFGLSRLKASTFL----------SSKSAAGTPEWMAPEVLRD----EPSNEKSDVYSFGVILWE 231 (309)
T ss_dssp CTT-------CCEEECCCC---------------------------CCTTSCHHHHTT----CCCCTTHHHHHHHHHHHH
T ss_pred eCC-------CcEEECCCCCCcccccccc----------ccccCCCCccccChhhhcC----CCCCchhhHHHHHHHHHH
Confidence 887 7899999999875433211 1123469999999999975 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
|++|..||.+....+....+.... ...++. ..++++.+|+.+||+.||.+||
T Consensus 232 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~~Rp 284 (309)
T 3p86_A 232 LATLQQPWGNLNPAQVVAAVGFKCKRLEIPR---------------------------NLNPQVAAIIEGCWTNEPWKRP 284 (309)
T ss_dssp HHHCCCTTTTSCHHHHHHHHHHSCCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSC
T ss_pred HHhCCCCCCCCCHHHHHHHHHhcCCCCCCCc---------------------------cCCHHHHHHHHHHccCChhhCc
Confidence 999999999888877776664322 222111 3445699999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|++|+++.+.....
T Consensus 285 s~~~ll~~L~~~~~ 298 (309)
T 3p86_A 285 SFATIMDLLRPLIK 298 (309)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHH
Confidence 99999998776543
No 32
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=374.63 Aligned_cols=264 Identities=22% Similarity=0.300 Sum_probs=212.5
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChH--HHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSAD--EIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~--~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
..|++.+.||+|+||.||+|.+. +..+|+|+........... ..+ .+.+|+.+|+.++||||+++++++.+.
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE----DIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHH----HHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHH----HHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 45899999999999999999985 5779999865443221111 122 347899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
. ..++||||+++++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||+
T Consensus 87 ~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll 147 (326)
T 2y0a_A 87 T--------------DVILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147 (326)
T ss_dssp S--------------EEEEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred C--------------EEEEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEE
Confidence 5 67999999999999999864 3469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+. .....+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 148 ~~~~---~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~ 209 (326)
T 2y0a_A 148 LDRN---VPKPRIKIIDFGLAHKIDFGNE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYI 209 (326)
T ss_dssp SCSS---SSSCCEEECCCTTCEECCTTSC-----------CCCCCSCTTTCCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred ecCC---CCCCCEEEEECCCCeECCCCCc-----------cccccCCcCcCCceeecC----CCCCcHHHHHHHHHHHHH
Confidence 8762 1123799999999976543211 123469999999999875 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
|++|..||.+....+....+............ ...++.+.+|+.+||+.||.+|||
T Consensus 210 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~Rpt 265 (326)
T 2y0a_A 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYF------------------------SNTSALAKDFIRRLLVKDPKKRMT 265 (326)
T ss_dssp HHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHH------------------------TTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHHCcCCCCCCCHHHHHHHHHhcCCCcCcccc------------------------ccCCHHHHHHHHHHccCChhhCCC
Confidence 99999999988887777777554432211111 134566999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001152 1118 AGDLYEMFVARTS 1130 (1137)
Q Consensus 1118 a~EVL~~L~~~~~ 1130 (1137)
+.|+++|+|+...
T Consensus 266 ~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 266 IQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHSTTTSCC
T ss_pred HHHHhcCCCccCC
Confidence 9999999999743
No 33
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.6e-40 Score=374.75 Aligned_cols=260 Identities=25% Similarity=0.283 Sum_probs=204.2
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 872 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~-----~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg 872 (1137)
.....+|++.+.||+|+||.||+|++ .+..+|+|+.............. .+.+|+.+|+.++||||+++++
T Consensus 13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~ 88 (327)
T 3a62_A 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTA----HTKAERNILEEVKHPFIVDLIY 88 (327)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------HHHHHHHCCCTTBCCEEE
T ss_pred CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHH----HHHHHHHHHHhCCCCCccceeE
Confidence 34567899999999999999999997 35778999864332211122222 2378999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCC
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 952 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP 952 (1137)
++...+ ..|+||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||
T Consensus 89 ~~~~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp 149 (327)
T 3a62_A 89 AFQTGG--------------KLYLILEYLSGGELFMQLER-----EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKP 149 (327)
T ss_dssp EEECSS--------------CEEEEEECCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCT
T ss_pred EEEcCC--------------EEEEEEeCCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCH
Confidence 998765 56999999999999999976 24689999999999999999999999999999999
Q ss_pred CCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001152 953 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1032 (1137)
Q Consensus 953 ~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1032 (1137)
+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++||||||
T Consensus 150 ~Nill~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG 208 (327)
T 3a62_A 150 ENIMLNHQ-------GHVKLTDFGLCKESIHDGT----------VTHTFCGTIEYMAPEILMR----SGHNRAVDWWSLG 208 (327)
T ss_dssp TTEEECTT-------SCEEECCCSCC--------------------CTTSSCCTTSCHHHHTT----SCCCTHHHHHHHH
T ss_pred HHeEECCC-------CcEEEEeCCcccccccCCc----------cccccCCCcCccCHhhCcC----CCCCCcccchhHH
Confidence 99999977 7899999999875432211 1123469999999999875 4678999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1033 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1033 viL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
|++|+|++|..||.+.+..+....+...... ++. ..++++.+++.+||+.||
T Consensus 209 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~~~~~~~li~~~L~~dp 260 (327)
T 3a62_A 209 ALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LPP---------------------------YLTQEARDLLKKLLKRNA 260 (327)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-CCT---------------------------TSCHHHHHHHHHHSCSCG
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-CCC---------------------------CCCHHHHHHHHHHHhcCH
Confidence 9999999999999988887777777554321 111 234569999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhc
Q 001152 1113 TERP-----TAGDLYEMFVART 1129 (1137)
Q Consensus 1113 ~~RP-----Sa~EVL~~L~~~~ 1129 (1137)
.+|| +++|+++|+|+..
T Consensus 261 ~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 261 ASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp GGSTTSSTTTHHHHHHSGGGSS
T ss_pred hhccCCCCCCHHHHHcCCcccC
Confidence 9999 8999999999964
No 34
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=389.12 Aligned_cols=261 Identities=25% Similarity=0.307 Sum_probs=212.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||+||+|.+. +..+|+|+...+. ....+.+ .+.+|+.+++.++|||||++++++.+.+
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~--~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~- 83 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK--LSARDHQ----KLEREARICRLLKHPNIVRLHDSISEEG- 83 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS--CHHHHHH----HHHHHHHHHHHCCBTTBCCEEEEEECSS-
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc--CCHHHHH----HHHHHHHHHHhCCCcCCCeEEEEEEECC-
Confidence 46999999999999999999984 5778888754332 2222333 3488999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||++||+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 84 -------------~~~lv~E~~~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~ 145 (444)
T 3soa_A 84 -------------HHYLIFDLVTGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLAS 145 (444)
T ss_dssp -------------EEEEEECCCBCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESB
T ss_pred -------------EEEEEEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEec
Confidence 67999999999999999876 346999999999999999999999999999999999999985
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+. ..+.+||+|||++......... .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 146 ~~----~~~~vkL~DFG~a~~~~~~~~~----------~~~~~gt~~Y~APE~l~~----~~~~~~~DIwSlGvilyell 207 (444)
T 3soa_A 146 KL----KGAAVKLADFGLAIEVEGEQQA----------WFGFAGTPGYLSPEVLRK----DPYGKPVDLWACGVILYILL 207 (444)
T ss_dssp SS----TTCCEEECCCSSCBCCCTTCCB----------CCCSCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHH
T ss_pred cC----CCCcEEEccCceeEEecCCCce----------eecccCCcccCCHHHhcC----CCCCCccccHHHHHHHHHHH
Confidence 41 1267999999999765432211 123469999999999875 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+.+..++...+..+........+ ...++++.+|+.+||+.||.+|||+.
T Consensus 208 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dP~~Rpta~ 263 (444)
T 3soa_A 208 VGYPPFWDEDQHRLYQQIKAGAYDFPSPEW------------------------DTVTPEAKDLINKMLTINPSKRITAA 263 (444)
T ss_dssp HSSCSCCCSSHHHHHHHHHHTCCCCCTTTT------------------------TTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred hCCCCCCCccHHHHHHHHHhCCCCCCcccc------------------------ccCCHHHHHHHHHHcCCChhHCCCHH
Confidence 999999998888888888766532211111 13456699999999999999999999
Q ss_pred HHHHHHHhhc
Q 001152 1120 DLYEMFVART 1129 (1137)
Q Consensus 1120 EVL~~L~~~~ 1129 (1137)
|+++|+|+..
T Consensus 264 e~L~hp~~~~ 273 (444)
T 3soa_A 264 EALKHPWISH 273 (444)
T ss_dssp HHHHSCTTHH
T ss_pred HHhcCccccC
Confidence 9999999864
No 35
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=8.7e-40 Score=376.33 Aligned_cols=266 Identities=25% Similarity=0.312 Sum_probs=210.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCC-ChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGS-SADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~-~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
.+|++.+.||+|+||+||+|.+. +..+|+|+........ .....+ .+.+|+.+++.++||||+++++++.+.+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE----DLKREASICHMLKHPHIVELLETYSSDG 99 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHH----HHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHH----HHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence 46999999999999999999984 5789999865332111 001122 3478999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..|+||||+++++|.+++..... ....+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 100 --------------~~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~ 164 (351)
T 3c0i_A 100 --------------MLYMVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 164 (351)
T ss_dssp --------------EEEEEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------EEEEEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEe
Confidence 67999999999999998875432 234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+. ....+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 165 ~~~----~~~~vkl~Dfg~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l 226 (351)
T 3c0i_A 165 SKE----NSAPVKLGGFGVAIQLGESGL----------VAGGRVGTPHFMAPEVVKR----EPYGKPVDVWGCGVILFIL 226 (351)
T ss_dssp SSS----TTCCEEECCCTTCEECCTTSC----------BCCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred cCC----CCCcEEEecCcceeEecCCCe----------eecCCcCCcCccCHHHHcC----CCCCchHhhHHHHHHHHHH
Confidence 652 124599999999976543211 1123469999999999875 4678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+. ..++...+..+.....+..+ ...++++.+|+.+||+.||++|||+
T Consensus 227 l~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dP~~R~s~ 281 (351)
T 3c0i_A 227 LSGCLPFYGT-KERLFEGIIKGKYKMNPRQW------------------------SHISESAKDLVRRMLMLDPAERITV 281 (351)
T ss_dssp HHSSCSSCSS-HHHHHHHHHHTCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHCCCCCCCc-HHHHHHHHHcCCCCCCcccc------------------------ccCCHHHHHHHHHHCCCChhHCcCH
Confidence 9999999874 44555555554432222111 1345669999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001152 1119 GDLYEMFVART 1129 (1137)
Q Consensus 1119 ~EVL~~L~~~~ 1129 (1137)
.|+++|+|+..
T Consensus 282 ~e~l~hp~~~~ 292 (351)
T 3c0i_A 282 YEALNHPWLKE 292 (351)
T ss_dssp HHHHTSHHHHT
T ss_pred HHHhcChhhcC
Confidence 99999999974
No 36
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=9.4e-40 Score=364.65 Aligned_cols=285 Identities=19% Similarity=0.236 Sum_probs=208.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
+.+|++.+.||+|+||+||+|++. +..+|+|+...... .....+. +.+|+.++++++||||+++++++.+..
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 74 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSS----ALREICLLKELKHKNIVRLHDVLHSDK 74 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHH----HHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchH----HHHHHHHHhcCCCCCEeeEEeEEEeCC
Confidence 468999999999999999999985 46789998654432 2222223 378999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||++ ++|.+++.. ....+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 75 --------------~~~lv~e~~~-~~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~ 135 (292)
T 3o0g_A 75 --------------KLTLVFEFCD-QDLKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135 (292)
T ss_dssp --------------EEEEEEECCS-EEHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEecCC-CCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence 6799999997 577776654 134699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 136 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l 195 (292)
T 3o0g_A 136 RN-------GELKLANFGLARAFGIPVR----------CYSAEVVTLWYRPPDVLFG---AKLYSTSIDMWSAGCIFAEL 195 (292)
T ss_dssp TT-------SCEEECCCTTCEECCSCCS----------CCCSCCSCGGGCCHHHHTT---CSCCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccceecCCccc----------cccCCccccCCcChHHHcC---CCCcCchHHHHHHHHHHHHH
Confidence 87 7899999999976543211 1123468999999999875 23578999999999999999
Q ss_pred HhCCCC-CCCCCHHHHHHHHHcCCCCCchhHHhhhcccccc-cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1039 LTLQVP-YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEH-EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1039 LTG~~P-f~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
++|..| |.+.+..+....+...........+......... ..................++++.+|+.+||+.||++||
T Consensus 196 ~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 275 (292)
T 3o0g_A 196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI 275 (292)
T ss_dssp TTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCC
Confidence 998877 4555655555555332111111111100000000 00000000011111224667799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|++|+++|+|+..-
T Consensus 276 t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 276 SAEEALQHPYFSDF 289 (292)
T ss_dssp CHHHHHTSGGGTTC
T ss_pred CHHHHhcCcccccC
Confidence 99999999999854
No 37
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.6e-40 Score=366.74 Aligned_cols=282 Identities=19% Similarity=0.255 Sum_probs=207.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
+.+|++.+.||+|+||+||+|++. +..+|+|+....... . .....+.+|+.++++++||||+++++++...+
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~--~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 73 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED--E----GIPSTTIREISILKELKHSNIVKLYDVIHTKK- 73 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG--G----CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-
T ss_pred CccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc--c----ccchhHHHHHHHHHhcCCCCEeeeeeEEccCC-
Confidence 368999999999999999999985 577899876433211 1 11123478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||++ ++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 74 -------------~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~ 135 (288)
T 1ob3_A 74 -------------RLVLVFEHLD-QDLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135 (288)
T ss_dssp -------------CEEEEEECCS-EEHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred -------------eEEEEEEecC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 5699999997 5999988752 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 136 ~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l~ 195 (288)
T 1ob3_A 136 E-------GELKIADFGLARAFGIPVR----------KYTHEIVTLWYRAPDVLMG---SKKYSTTIDIWSVGCIFAEMV 195 (288)
T ss_dssp T-------SCEEECCTTHHHHHCC-------------------CCCTTCCHHHHTT---CCSCCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeECccccccCcccc----------ccccccccccccCchheeC---CCCCCcHHHHHHHHHHHHHHH
Confidence 7 7899999999876543211 1113468999999999874 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcC--CCCCch-hHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1040 TLQVPYMGLSELEIHDLIQMG--KRPRLT-DELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g--~~p~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|..||.+....+....+... ..+... ......... ..... ..............++++.+|+.+||+.||++||
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 273 (288)
T 1ob3_A 196 NGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY-DPNFT-VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273 (288)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC-CTTCC-CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred hCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc-ccccc-cccCccHHHHhhhcCHHHHHHHHHHcCCCcccCC
Confidence 999999988777666555321 111100 000000000 00000 0000001111124567799999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001152 1117 TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~ 1129 (1137)
|++|+++|+|+..
T Consensus 274 t~~e~l~hp~f~~ 286 (288)
T 1ob3_A 274 TAKQALEHAYFKE 286 (288)
T ss_dssp CHHHHHTSGGGGC
T ss_pred CHHHHhcCcchhh
Confidence 9999999999974
No 38
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=9.3e-40 Score=371.29 Aligned_cols=255 Identities=27% Similarity=0.455 Sum_probs=210.7
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCCC
Q 001152 803 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 880 (1137)
Q Consensus 803 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~~ 880 (1137)
.|...+.||+|+||.||+|++. +..||||+...... ...+. +.+|+.++++++||||+++++++...+
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~-- 115 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRREL----LFNEVVIMRDYQHFNVVEMYKSYLVGE-- 115 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHH----HHHHHHHHTTCCCTTBCCEEEEEEETT--
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHH----HHHHHHHHHhCCCCCcceEEEEEEECC--
Confidence 3678889999999999999985 67899998653321 11222 378999999999999999999998765
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEeccc
Q 001152 881 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 960 (1137)
Q Consensus 881 ~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~ 960 (1137)
..++||||+++++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 116 ------------~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 116 ------------ELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp ------------EEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred ------------EEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 67999999999999998864 369999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001152 961 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1040 (1137)
Q Consensus 961 ~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1040 (1137)
+.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 178 -------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~~ 236 (321)
T 2c30_A 178 -------GRVKLSDFGFCAQISKDVP----------KRKSLVGTPYWMAPEVISR----SLYATEVDIWSLGIMVIEMVD 236 (321)
T ss_dssp -------CCEEECCCTTCEECCSSSC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHHH
T ss_pred -------CcEEEeeeeeeeecccCcc----------ccccccCCccccCHhhhcC----CCCCchhhHHHHHHHHHHHHh
Confidence 7899999999876543211 1123469999999999875 568899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001152 1041 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1120 (1137)
Q Consensus 1041 G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~E 1120 (1137)
|..||......+....+.....+.+... ...++.+.+++.+||+.||.+|||++|
T Consensus 237 g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~l~~li~~~l~~dp~~Rps~~e 291 (321)
T 2c30_A 237 GEPPYFSDSPVQAMKRLRDSPPPKLKNS-------------------------HKVSPVLRDFLERMLVRDPQERATAQE 291 (321)
T ss_dssp SSCTTTTSCHHHHHHHHHHSSCCCCTTG-------------------------GGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCcCcc-------------------------ccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 9999998888777777765543332210 134556999999999999999999999
Q ss_pred HHHHHHhhcCC
Q 001152 1121 LYEMFVARTSS 1131 (1137)
Q Consensus 1121 VL~~L~~~~~s 1131 (1137)
+++|+|+....
T Consensus 292 ll~hp~~~~~~ 302 (321)
T 2c30_A 292 LLDHPFLLQTG 302 (321)
T ss_dssp HHTSGGGGGCC
T ss_pred HhcChhhccCC
Confidence 99999998654
No 39
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.6e-39 Score=360.34 Aligned_cols=265 Identities=25% Similarity=0.302 Sum_probs=215.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
.++|++.+.||+|+||.||+|.+. +..+|+|+..... ......+. +.+|+.++++++||||+++++++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~ 78 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDFQK----LEREARICRKLQHPNIVRLHDSIQEES 78 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc--CCHHHHHH----HHHHHHHHHHcCCCCcCeEEEEEEcCC
Confidence 367999999999999999999985 5678998865433 22333333 488999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 79 --------------~~~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~ 139 (284)
T 3kk8_A 79 --------------FHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLA 139 (284)
T ss_dssp --------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEES
T ss_pred --------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEe
Confidence 66999999999999998876 24699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+. ..+.+||+|||++........ .....||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 140 ~~~----~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 200 (284)
T 3kk8_A 140 SKA----KGAAVKLADFGLAIEVNDSEA-----------WHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYIL 200 (284)
T ss_dssp SSS----TTCCEEECCCTTCEECCSSCB-----------CCCSCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred cCC----CCCcEEEeeceeeEEcccCcc-----------ccCCCCCcCCcCchhhcC----CCCCcccchHHHHHHHHHH
Confidence 652 124599999999876543221 123469999999999875 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+....+....+..+......... ...++++.+++.+||+.||.+|||+
T Consensus 201 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~li~~~l~~dp~~Rps~ 256 (284)
T 3kk8_A 201 LVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW------------------------DTVTPEAKSLIDSMLTVNPKKRITA 256 (284)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHTCCCCCTTTT------------------------TTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HHCCCCCCCCchhHHHHHHHhccccCCchhh------------------------cccCHHHHHHHHHHcccChhhCCCH
Confidence 9999999998888887777655432211100 1345669999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001152 1119 GDLYEMFVARTSSSI 1133 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ss~ 1133 (1137)
+|+++|+|+......
T Consensus 257 ~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 257 DQALKVPWICNRERV 271 (284)
T ss_dssp HHHTTSHHHHSCCCG
T ss_pred HHHhcCccccCChhH
Confidence 999999999865443
No 40
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.6e-40 Score=377.35 Aligned_cols=255 Identities=24% Similarity=0.295 Sum_probs=213.3
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
..+.+|++.+.||+|+||.||+|++. +..+|+|+...... ........+.+|+.+++.++||||+++++++.+
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 112 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-----VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh-----ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 45789999999999999999999985 57789998643211 111112234789999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.. ..|+||||++||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 113 ~~--------------~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl 173 (350)
T 1rdq_E 113 NS--------------NLYMVMEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173 (350)
T ss_dssp SS--------------EEEEEEECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred CC--------------EEEEEEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEE
Confidence 65 679999999999999999862 35999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||+++...... ....||+.|+|||++.+ ..++.++|||||||++|
T Consensus 174 l~~~-------g~~kL~DFg~a~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ 229 (350)
T 1rdq_E 174 IDQQ-------GYIQVTDFGFAKRVKGRT-------------WTLCGTPEALAPEIILS----KGYNKAVDWWALGVLIY 229 (350)
T ss_dssp ECTT-------SCEEECCCTTCEECSSCB-------------CCCEECGGGCCHHHHTT----CCBCTHHHHHHHHHHHH
T ss_pred ECCC-------CCEEEcccccceeccCCc-------------ccccCCccccCHHHhcC----CCCCCcCCEecccHhHh
Confidence 9887 789999999997654321 13469999999999875 56889999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
||++|..||.+.+..++...+..+... ++. ..++++.+++.+||+.||.+||
T Consensus 230 ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~~~~~~~li~~lL~~dp~~R~ 281 (350)
T 1rdq_E 230 EMAAGYPPFFADQPIQIYEKIVSGKVR-FPS---------------------------HFSSDLKDLLRNLLQVDLTKRF 281 (350)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TCCHHHHHHHHHHSCSCTTTCT
T ss_pred HHhhCCCCCCCCCHHHHHHHHHcCCCC-CCC---------------------------CCCHHHHHHHHHHhhcCHHhcc
Confidence 999999999998888888887665421 111 2345699999999999999999
Q ss_pred C-----HHHHHHHHHhhc
Q 001152 1117 T-----AGDLYEMFVART 1129 (1137)
Q Consensus 1117 S-----a~EVL~~L~~~~ 1129 (1137)
+ ++||++|+|+..
T Consensus 282 ~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 282 GNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp TSSTTTTHHHHTSGGGTT
T ss_pred CCccCCHHHHHhCcCcCC
Confidence 8 999999999964
No 41
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=368.70 Aligned_cols=268 Identities=24% Similarity=0.243 Sum_probs=204.7
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCCh------------------HHHHHhHHhHHHHHHH
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSA------------------DEIRNFEYSCLGEVRM 858 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~------------------~~~e~~~~~~lrEi~i 858 (1137)
..+.+|++.+.||+|+||.||+|++. +..||+|+.......... ........++.+|+.+
T Consensus 10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 89 (298)
T 2zv2_A 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI 89 (298)
T ss_dssp CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence 45689999999999999999999984 577899986443211100 0001112345889999
Q ss_pred HHhCCCCCcceeeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 001152 859 LGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALV 938 (1137)
Q Consensus 859 L~~L~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~ 938 (1137)
+++++||||+++++++.+... ...++||||+++++|.+++. ...+++..++.++.||+.||+
T Consensus 90 l~~l~h~~iv~~~~~~~~~~~------------~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~ 151 (298)
T 2zv2_A 90 LKKLDHPNVVKLVEVLDDPNE------------DHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIE 151 (298)
T ss_dssp HHTCCCTTBCCEEEEEECSSS------------SEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCeEEEEEEcCCC------------CEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999986321 16799999999999987643 246999999999999999999
Q ss_pred HHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccC
Q 001152 939 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1018 (1137)
Q Consensus 939 yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1018 (1137)
|||++||+||||||+|||++.+ +.+||+|||++......... .....||+.|+|||++.+..
T Consensus 152 ~lH~~~ivH~Dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~- 213 (298)
T 2zv2_A 152 YLHYQKIIHRDIKPSNLLVGED-------GHIKIADFGVSNEFKGSDAL----------LSNTVGTPAFMAPESLSETR- 213 (298)
T ss_dssp HHHHTTEECCCCCGGGEEECTT-------SCEEECCCTTCEECSSSSCE----------ECCCCSCGGGCCGGGCCTTC-
T ss_pred HHHHCCeeccCCCHHHEEECCC-------CCEEEecCCCcccccccccc----------ccCCcCCccccChhhhccCC-
Confidence 9999999999999999999887 78999999999765432211 11346999999999987521
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001152 1019 PNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1098 (1137)
Q Consensus 1019 ~~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1137)
...++.++|||||||++|+|++|..||.......+...+......... ....++
T Consensus 214 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~ 267 (298)
T 2zv2_A 214 KIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD--------------------------QPDIAE 267 (298)
T ss_dssp CCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS--------------------------SSCCCH
T ss_pred CCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCC--------------------------ccccCH
Confidence 112478999999999999999999999988777766666543321100 013445
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001152 1099 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1099 ~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
++.+++.+||+.||++|||+.|+++|+|+.
T Consensus 268 ~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 268 DLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 699999999999999999999999999985
No 42
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.7e-40 Score=378.52 Aligned_cols=258 Identities=26% Similarity=0.329 Sum_probs=210.4
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEe
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 875 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~ 875 (1137)
..+.+|++.+.||+|+||.||+|++. +..+|+|+...... ..+.....+.+|..++..+ +||||+++++++.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~ 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-----hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE
Confidence 45789999999999999999999985 46788887643211 0011112347789999877 8999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+.. ..|+||||++||+|.+++... ..+++..+..++.||+.||+|||++||+||||||+||
T Consensus 89 ~~~--------------~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NI 149 (345)
T 1xjd_A 89 TKE--------------NLFFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI 149 (345)
T ss_dssp CSS--------------EEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred eCC--------------EEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhE
Confidence 765 679999999999999999762 4699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 150 ll~~~-------g~vkL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 208 (345)
T 1xjd_A 150 LLDKD-------GHIKIADFGMCKENMLGDA----------KTNTFCGTPDYIAPEILLG----QKYNHSVDWWSFGVLL 208 (345)
T ss_dssp EECTT-------SCEEECCCTTCBCCCCTTC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHH
T ss_pred EECCC-------CCEEEeEChhhhhcccCCC----------cccCCCCCcccCChhhhcC----CCCCChhhhHHHHHHH
Confidence 99987 7899999999875432111 1124579999999999975 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|||++|..||.+.+..++...+..+.. .++. ..++++.+|+.+||+.||.+|
T Consensus 209 ~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~---------------------------~~s~~~~~li~~lL~~dp~~R 260 (345)
T 1xjd_A 209 YEMLIGQSPFHGQDEEELFHSIRMDNP-FYPR---------------------------WLEKEAKDLLVKLFVREPEKR 260 (345)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHhCCC-CCCc---------------------------ccCHHHHHHHHHHhcCCHhHc
Confidence 999999999999888888887765432 1111 234568999999999999999
Q ss_pred CCHH-HHHHHHHhhc
Q 001152 1116 PTAG-DLYEMFVART 1129 (1137)
Q Consensus 1116 PSa~-EVL~~L~~~~ 1129 (1137)
|++. +|++|+|+..
T Consensus 261 ~~~~~~i~~hp~f~~ 275 (345)
T 1xjd_A 261 LGVRGDIRQHPLFRE 275 (345)
T ss_dssp BTTBSCGGGSGGGTT
T ss_pred CCChHHHHcCccccC
Confidence 9998 9999999964
No 43
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2e-39 Score=372.94 Aligned_cols=260 Identities=22% Similarity=0.352 Sum_probs=206.7
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeee
Q 001152 797 DPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGH 873 (1137)
Q Consensus 797 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~ 873 (1137)
.+..+.+|++.+.||+|+||.||+|++. +..+|+|+...... ......+. +.+|+.+++++ +|||||+++++
T Consensus 4 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~----~~~E~~~l~~~~~hp~iv~l~~~ 78 (345)
T 3a8x_A 4 DPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDW----VQTEKHVFEQASNHPFLVGLHSC 78 (345)
T ss_dssp CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHH----HHHHHHHHHHTTTCTTBCCEEEE
T ss_pred CCCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHH----HHHHHHHHHhcCCCCccCeEEEE
Confidence 3456788999999999999999999985 46788888654332 12233333 47899999988 79999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCC
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 953 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~ 953 (1137)
+.+.. ..|+||||+++|+|.+++... ..+++..++.++.||+.||+|||++||+||||||+
T Consensus 79 ~~~~~--------------~~~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~ 139 (345)
T 3a8x_A 79 FQTES--------------RLFFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 139 (345)
T ss_dssp EECSS--------------EEEEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGG
T ss_pred EEeCC--------------EEEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHH
Confidence 98765 679999999999999999762 46999999999999999999999999999999999
Q ss_pred CeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001152 954 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1033 (1137)
Q Consensus 954 NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1033 (1137)
|||++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||
T Consensus 140 NIll~~~-------g~~kL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~ 198 (345)
T 3a8x_A 140 NVLLDSE-------GHIKLTDYGMCKEGLRPGD----------TTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGV 198 (345)
T ss_dssp GEEECTT-------SCEEECCGGGCBCSCCTTC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHH
T ss_pred HEEECCC-------CCEEEEeccccccccCCCC----------cccccCCCccccCccccCC----CCCChHHhHHHHHH
Confidence 9999987 7899999999875332111 1124579999999999975 56889999999999
Q ss_pred HHHHHHhCCCCCCCC---------CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHH
Q 001152 1034 LLLELLTLQVPYMGL---------SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1104 (1137)
Q Consensus 1034 iL~ELLTG~~Pf~~~---------~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl 1104 (1137)
++|||++|..||... ....+...+..... .++ ...++++.+|+
T Consensus 199 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p---------------------------~~~s~~~~~li 250 (345)
T 3a8x_A 199 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIP---------------------------RSLSVKAASVL 250 (345)
T ss_dssp HHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHH
T ss_pred HHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC-CCC---------------------------CCCCHHHHHHH
Confidence 999999999999652 22223333332221 111 03445699999
Q ss_pred HHhcccCCCCCCCH------HHHHHHHHhhc
Q 001152 1105 RRCTEENPTERPTA------GDLYEMFVART 1129 (1137)
Q Consensus 1105 ~~CL~~DP~~RPSa------~EVL~~L~~~~ 1129 (1137)
.+||+.||.+||++ +|+++|+|+..
T Consensus 251 ~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 251 KSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp HHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred HHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 99999999999985 89999999964
No 44
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.6e-39 Score=377.17 Aligned_cols=262 Identities=22% Similarity=0.362 Sum_probs=210.0
Q ss_pred CCCceEeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCccee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 870 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~---------~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkl 870 (1137)
..+|++.+.||+|+||.||+|++.+ ..||+|+.. .. ......+. +.+|+.+++.+ +|||||++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~E~~~l~~l~~hpnIv~~ 152 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DD-ATEKDLSD----LVSEMEMMKMIGKHKNIINL 152 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECC--TT-CBHHHHHH----HHHHHHHHHHSCCCTTBCCE
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEec--CC-cCHHHHHH----HHHHHHHHHHhcCCCCEeeE
Confidence 4679999999999999999998731 347777643 22 12333333 48999999999 79999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001152 871 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 939 (1137)
Q Consensus 871 lg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-----------~~~~ls~~~i~~I~~QIa~gL~y 939 (1137)
++++.+.+ ..|+||||+++|+|.+++...... ....+++..++.|+.||+.||+|
T Consensus 153 ~~~~~~~~--------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 218 (370)
T 2psq_A 153 LGACTQDG--------------PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 218 (370)
T ss_dssp EEEECSSS--------------SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEccCC--------------CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 99998765 459999999999999999863211 12458999999999999999999
Q ss_pred HHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCC
Q 001152 940 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1019 (1137)
Q Consensus 940 LHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1019 (1137)
||++||+||||||+|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+
T Consensus 219 LH~~~ivHrDlkp~NIll~~~-------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~---- 279 (370)
T 2psq_A 219 LASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDINNIDYY--------KKTTNGRLPVKWMAPEALFD---- 279 (370)
T ss_dssp HHHTTEECSCCCGGGEEECTT-------CCEEECCCSSCEETTCCCTT--------CTTTTTTSCGGGCCHHHHHT----
T ss_pred HHhCCeeccccchhhEEECCC-------CCEEEccccCCcccCcccce--------ecccCCCcccceECHhHhcC----
Confidence 999999999999999999887 78999999999765432211 11123357889999999875
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001152 1020 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1098 (1137)
Q Consensus 1020 ~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1137)
..++.++|||||||++|||++ |..||.+....++...+..+..+..+. .+++
T Consensus 280 ~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 332 (370)
T 2psq_A 280 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------------------------NCTN 332 (370)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT---------------------------TSCH
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCC---------------------------CCCH
Confidence 568999999999999999999 999999887777777776655433221 3445
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1099 FLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1099 ~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
++.+++.+||+.||.+|||+.|+++++....
T Consensus 333 ~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 333 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 6999999999999999999999999988753
No 45
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-40 Score=381.22 Aligned_cols=259 Identities=21% Similarity=0.280 Sum_probs=203.9
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
...+++|++.+.||+|+||.||+|.+ .+..||+|+..... ........++.+|+.+++.++||||+++++++.
T Consensus 5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 79 (336)
T 3h4j_B 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQL-----LKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT 79 (336)
T ss_dssp CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHH-----ccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 44678999999999999999999998 45779999864321 111122234588999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
... ..++||||+ +|+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||
T Consensus 80 ~~~--------------~~~lv~E~~-~g~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NI 139 (336)
T 3h4j_B 80 TPT--------------DIVMVIEYA-GGELFDYIVE-----KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENL 139 (336)
T ss_dssp CSS--------------EEEEEECCC-CEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTE
T ss_pred eCC--------------EEEEEEECC-CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhE
Confidence 765 679999999 6899998876 24699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||++........ .....||+.|+|||++.+. ...+.++|||||||++
T Consensus 140 ll~~~-------~~~kl~DFG~s~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il 198 (336)
T 3h4j_B 140 LLDDN-------LNVKIADFGLSNIMTDGNF-----------LKTSCGSPNYAAPEVINGK---LYAGPEVDVWSCGIVL 198 (336)
T ss_dssp EECTT-------CCEEECCSSCTBTTTTSBT-----------TCCCTTSTTTSCGGGSCCS---GGGCHHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEEEeccceeccCCcc-----------cccccCCcCcCCHHHHcCC---CCCCCccchhHHHHHH
Confidence 99977 7899999999875543211 1234699999999998752 2347899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|+|++|..||.+.....+...+..+. ... ....++++.+|+.+||+.||.+|
T Consensus 199 ~~ll~g~~Pf~~~~~~~~~~~i~~~~-------------------------~~~---p~~~s~~~~~li~~~L~~dP~~R 250 (336)
T 3h4j_B 199 YVMLVGRLPFDDEFIPNLFKKVNSCV-------------------------YVM---PDFLSPGAQSLIRRMIVADPMQR 250 (336)
T ss_dssp HHHHHSSCSSBCSSSTTCBCCCCSSC-------------------------CCC---CTTSCHHHHHHHHTTSCSSGGGS
T ss_pred HHHHhCCCCCCCccHHHHHHHHHcCC-------------------------CCC---cccCCHHHHHHHHHHcCCChhHC
Confidence 99999999997643221111110000 000 01345679999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001152 1116 PTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~ 1130 (1137)
||++|+++|+|+...
T Consensus 251 pt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 251 ITIQEIRRDPWFNVN 265 (336)
T ss_dssp CCHHHHTTCHHHHTT
T ss_pred cCHHHHHhChhhccC
Confidence 999999999999754
No 46
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2e-39 Score=358.57 Aligned_cols=263 Identities=23% Similarity=0.281 Sum_probs=211.6
Q ss_pred CCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|.+.. ..+|+|+...... . ..+. +.+|+.++++++||||+++++++.+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~---~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~- 79 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-E---DVDR----FKQEIEIMKSLDHPNIIRLYETFEDNT- 79 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-S---CHHH----HHHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-c---hHHH----HHHHHHHHHhCCCCCEeeEEEEEecCC-
Confidence 469999999999999999999865 4567776533221 1 1222 478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||+..
T Consensus 80 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~ 141 (277)
T 3f3z_A 80 -------------DIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLT 141 (277)
T ss_dssp -------------EEEEEEECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred -------------eEEEEEeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEec
Confidence 67999999999999998876 245899999999999999999999999999999999999933
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ ...+.+||+|||++........ .....||+.|+|||++.+ .++.++||||||+++|+|+
T Consensus 142 ~----~~~~~~~l~Dfg~~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~~l~~l~ 201 (277)
T 3f3z_A 142 D----SPDSPLKLIDFGLAARFKPGKM-----------MRTKVGTPYYVSPQVLEG-----LYGPECDEWSAGVMMYVLL 201 (277)
T ss_dssp S----STTCCEEECCCTTCEECCTTSC-----------BCCCCSCTTTCCHHHHTT-----CBCTTHHHHHHHHHHHHHH
T ss_pred C----CCCCcEEEEecccceeccCccc-----------hhccCCCCCccChHHhcc-----cCCchhhehhHHHHHHHHH
Confidence 2 1127899999999876543221 123469999999999864 4789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||......+....+..+......... ...++.+.+++.+||+.||.+|||+.
T Consensus 202 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~li~~~l~~dp~~R~s~~ 257 (277)
T 3f3z_A 202 CGYPPFSAPTDSEVMLKIREGTFTFPEKDW------------------------LNVSPQAESLIRRLLTKSPKQRITSL 257 (277)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHhCCCCCCchhh------------------------hcCCHHHHHHHHHHccCChhhCcCHH
Confidence 999999998888888777665543322111 13456699999999999999999999
Q ss_pred HHHHHHHhhcCCCCCC
Q 001152 1120 DLYEMFVARTSSSISS 1135 (1137)
Q Consensus 1120 EVL~~L~~~~~ss~s~ 1135 (1137)
|+++|+|+......+.
T Consensus 258 ~~l~h~~~~~~~~~~~ 273 (277)
T 3f3z_A 258 QALEHEWFEKQLSSSP 273 (277)
T ss_dssp HHTTSHHHHHHHCCSG
T ss_pred HHhcCHHHhccccccc
Confidence 9999999986544443
No 47
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.8e-40 Score=361.34 Aligned_cols=259 Identities=23% Similarity=0.298 Sum_probs=191.9
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
...+.+|++.+.||+|+||.||+|.+. +..+|+|+........ . ....++.+|+.+++.++||||+++++++.
T Consensus 9 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 83 (275)
T 2eue_A 9 GAHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAK-S----DMQGRIEREISYLRLLRHPHIIKLYDVIK 83 (275)
T ss_dssp CCBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcch-H----HHHHHHHHHHHHHHhCCCCCeEEEEEEEe
Confidence 345788999999999999999999874 5778999864332111 1 12234578999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+.+ ..++||||+ +++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||
T Consensus 84 ~~~--------------~~~lv~e~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Ni 143 (275)
T 2eue_A 84 SKD--------------EIIMVIEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 143 (275)
T ss_dssp CSS--------------CEEEEEECC-CEEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGE
T ss_pred cCC--------------eEEEEehhc-CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhE
Confidence 765 569999999 6899888865 24699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||++........ .....||+.|+|||++.+. ...+.++|||||||++
T Consensus 144 l~~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~---~~~~~~~Di~slG~il 202 (275)
T 2eue_A 144 LLDEH-------LNVKIADFGLSNIMTDGNF-----------LKTSCGSPNYAAPEVISGK---LYAGPEVDVWSCGVIL 202 (275)
T ss_dssp EECTT-------SCEEECCSSCC--------------------------CTTCCHHHHCC--------THHHHHHHHHHH
T ss_pred EECCC-------CCEEEeecccceeccCccc-----------ccCCCCCcCcCCceeeeCC---CCCCcccchHHHHHHH
Confidence 99987 7899999999875443211 1134689999999998752 2347899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|+|++|+.||...........+..+.... +. ..++.+.+++.+||+.||.+|
T Consensus 203 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~li~~~l~~dP~~R 254 (275)
T 2eue_A 203 YVMLCRRLPFDDESIPVLFKNISNGVYTL-PK---------------------------FLSPGAAGLIKRMLIVNPLNR 254 (275)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHTCCCC-CT---------------------------TSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCC-Cc---------------------------cCCHHHHHHHHHHhhcCHhHC
Confidence 99999999999888777777765544221 11 234558999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001152 1116 PTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~ 1130 (1137)
||++|+++|+|++..
T Consensus 255 ps~~e~l~h~~f~~~ 269 (275)
T 2eue_A 255 ISIHEIMQDDWFKVD 269 (275)
T ss_dssp CCHHHHTTCHHHHTT
T ss_pred CCHHHHhhCCeeccc
Confidence 999999999999864
No 48
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=364.58 Aligned_cols=285 Identities=22% Similarity=0.278 Sum_probs=208.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
+.+|++.+.||+|+||+||+|.+. +..+|+|+.... .......+ .+.+|+.++++++||||+++++++.+..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 75 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES--EDDPVIKK----IALREIRMLKQLKHPNLVNLLEVFRRKR 75 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCC--CC-HHHHH----HHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecc--ccchHHHH----HHHHHHHHHHhCCCCCccchhheeecCC
Confidence 468999999999999999999985 567888875322 22222222 3478999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+||+++
T Consensus 76 --------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~ 136 (311)
T 4agu_A 76 --------------RLHLVFEYCDHTVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT 136 (311)
T ss_dssp --------------EEEEEEECCSEEHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------eEEEEEEeCCCchHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc
Confidence 67999999999999988764 34699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++......... .....||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 137 ~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l 196 (311)
T 4agu_A 137 KH-------SVIKLCDFGFARLLTGPSDY----------YDDEVATRWYRSPELLVG---DTQYGPPVDVWAIGCVFAEL 196 (311)
T ss_dssp TT-------SCEEECCCTTCEECC----------------------GGGCCHHHHHT---CSCCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeCCCchhccCcccc----------cCCCcCCccccChHHHhc---CCCCCcchhhHHHHHHHHHH
Confidence 77 78999999999765432211 123468999999999874 24678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhh---cccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL---GSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
++|..||.+....+....+........+...... ........................++++.+|+.+||+.||.+|
T Consensus 197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 276 (311)
T 4agu_A 197 LSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTER 276 (311)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTS
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhc
Confidence 9999999988877766655432222222111110 0000000000000000001112566779999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001152 1116 PTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~ 1130 (1137)
||++|+++|+|+...
T Consensus 277 pt~~ell~hp~f~~~ 291 (311)
T 4agu_A 277 LTCEQLLHHPYFENI 291 (311)
T ss_dssp CCHHHHHTSGGGTTC
T ss_pred CCHHHHhcChHHHhc
Confidence 999999999999864
No 49
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=370.08 Aligned_cols=264 Identities=19% Similarity=0.320 Sum_probs=211.1
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
...+|++.+.||+|+||.||+|.+. +..||||+.... ......+. +.+|+.+++.++||||+++++++
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~ 119 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG---YTERQRRD----FLSEASIMGQFDHPNIIRLEGVV 119 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT---CCHHHHHH----HHHHHHHHTTCCCTTBCCEEEEE
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC---CCHHHHHH----HHHHHHHHHhCCCCCCCcEEEEE
Confidence 4567999999999999999999984 234888875322 12333333 48999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+.. ..++||||+++++|.++++. ....+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 120 ~~~~--------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N 181 (325)
T 3kul_A 120 TRGR--------------LAMIVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARN 181 (325)
T ss_dssp CGGG--------------CCEEEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred EeCC--------------ccEEEeeCCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce
Confidence 8765 45999999999999999965 23469999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||+++.......... ......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 182 Ill~~~-------~~~kl~Dfg~a~~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~i 243 (325)
T 3kul_A 182 VLVDSN-------LVCKVSDFGLSRVLEDDPDAAY-------TTTGGKIPIRWTAPEAIAF----RTFSSASDVWSFGVV 243 (325)
T ss_dssp EEECTT-------CCEEECCCSSCEECC----CCE-------ECC---CCGGGSCHHHHHH----CEECHHHHHHHHHHH
T ss_pred EEECCC-------CCEEECCCCcccccccCcccee-------eccCCCCcccccCHhHhcC----CCCCcHHHHHHHHHH
Confidence 999877 7899999999986544321110 0112346788999999976 467899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|+|++ |..||.+....++...+..+.....+. .+++.+.+|+.+||+.||.
T Consensus 244 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 296 (325)
T 3kul_A 244 MWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPM---------------------------GCPHALHQLMLDCWHKDRA 296 (325)
T ss_dssp HHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCC---------------------------CcCHHHHHHHHHHccCChh
Confidence 999999 999999988888888776654333221 3445699999999999999
Q ss_pred CCCCHHHHHHHHHhhcCCCC
Q 001152 1114 ERPTAGDLYEMFVARTSSSI 1133 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~~~ss~ 1133 (1137)
+|||+.||++.+........
T Consensus 297 ~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 297 QRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp GSCCHHHHHHHHHHHHHSCC
T ss_pred hCcCHHHHHHHHHHHHhCcc
Confidence 99999999999988754443
No 50
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.2e-39 Score=360.89 Aligned_cols=263 Identities=24% Similarity=0.320 Sum_probs=206.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
-.+|++.+.||+|+||.||+|++. +..+|+|+...... ......+ ++.+|+.++++++||||+++++++.+.+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~----~~~~e~~~l~~l~hp~iv~~~~~~~~~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLK----RFEREVHNSSQLSHQNIVSMIDVDEEDD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHH----HHHHHHHHHTTCCBTTBCCEEEEEECSS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHH----HHHHHHHHHhcCCCCCCceEEEeeeeCC
Confidence 367999999999999999999974 56788987643322 2223333 3489999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 85 --------------~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~ 145 (294)
T 4eqm_A 85 --------------CYYLVMEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID 145 (294)
T ss_dssp --------------EEEEEEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred --------------eEEEEEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 679999999999999999762 3699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 146 ~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 205 (294)
T 4eqm_A 146 SN-------KTLKIFDFGIAKALSETSLT---------QTNHVLGTVQYFSPEQAKG----EATDECTDIYSIGIVLYEM 205 (294)
T ss_dssp TT-------SCEEECCCSSSTTC----------------------CCSSCCHHHHHT----CCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEeCCCcccccccccc---------ccCccccCccccCHhHhcC----CCCCchHhHHHHHHHHHHH
Confidence 77 78999999999765432111 1123469999999999876 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-C
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-T 1117 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP-S 1117 (1137)
++|+.||.+....+..........+....... ...++.+.+++.+||+.||.+|| +
T Consensus 206 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~l~~li~~~l~~dp~~R~~~ 262 (294)
T 4eqm_A 206 LVGEPPFNGETAVSIAIKHIQDSVPNVTTDVR-----------------------KDIPQSLSNVILRATEKDKANRYKT 262 (294)
T ss_dssp HHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSC-----------------------TTSCHHHHHHHHHHSCSSGGGSCSS
T ss_pred HhCCCCCCCCChHHHHHHHhhccCCCcchhcc-----------------------cCCCHHHHHHHHHHhcCCHhHcccc
Confidence 99999999888776665555444333222110 14456799999999999999999 7
Q ss_pred HHHHHHHHHhhcC
Q 001152 1118 AGDLYEMFVARTS 1130 (1137)
Q Consensus 1118 a~EVL~~L~~~~~ 1130 (1137)
++++.+.+.....
T Consensus 263 ~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 263 IQEMKDDLSSVLH 275 (294)
T ss_dssp HHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHh
Confidence 7777777766543
No 51
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.9e-39 Score=374.59 Aligned_cols=259 Identities=24% Similarity=0.294 Sum_probs=210.4
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeE
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 874 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~ 874 (1137)
...+.+|++.+.||+|+||.||+|++.. ..+|+|+...... ........+.+|..++..+ +||||+++++++
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~ 90 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 90 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE
Confidence 4467899999999999999999999965 5688887643311 0111122347899999988 699999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+.+ ..|+||||++||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|
T Consensus 91 ~~~~--------------~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N 151 (353)
T 2i0e_A 91 QTMD--------------RLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 151 (353)
T ss_dssp ECSS--------------EEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred EcCC--------------EEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH
Confidence 8765 679999999999999999762 369999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 152 Ill~~~-------g~vkL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 210 (353)
T 2i0e_A 152 VMLDSE-------GHIKIADFGMCKENIWDGV----------TTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVL 210 (353)
T ss_dssp EEECTT-------SCEEECCCTTCBCCCCTTC----------CBCCCCSCGGGCCHHHHTT----CCBSTHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEEeCCcccccccCCc----------ccccccCCccccChhhhcC----CCcCCcccccchHHH
Confidence 999987 7899999999875332111 1124579999999999875 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|||++|..||.+.+..++...+...... ++. ..++++.+|+.+||+.||.+
T Consensus 211 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~li~~lL~~dP~~ 262 (353)
T 2i0e_A 211 LYEMLAGQAPFEGEDEDELFQSIMEHNVA-YPK---------------------------SMSKEAVAICKGLMTKHPGK 262 (353)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSCTTS
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhCCCC-CCC---------------------------CCCHHHHHHHHHHhhcCHHH
Confidence 99999999999998888888887654321 111 23456999999999999999
Q ss_pred CC-----CHHHHHHHHHhhc
Q 001152 1115 RP-----TAGDLYEMFVART 1129 (1137)
Q Consensus 1115 RP-----Sa~EVL~~L~~~~ 1129 (1137)
|| ++++|++|+|+..
T Consensus 263 R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 263 RLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp CTTCSTTHHHHHHTSGGGTT
T ss_pred cCCCCCCCHHHHhcCccccC
Confidence 99 4799999999864
No 52
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.1e-40 Score=373.31 Aligned_cols=260 Identities=24% Similarity=0.282 Sum_probs=203.6
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
-+.+|++.+.||+|+||+||+|.+. +..||+|+...+... ...+ .+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~----~~~~E~~~l~~l~hpnIv~~~~~~~~~ 77 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPE----NIKKEICINKMLNHENVVKFYGHRREG 77 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc---chHH----HHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 4678999999999999999999985 577899986433221 1112 347899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+ ..++||||+++++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 78 ~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll 138 (323)
T 3tki_A 78 N--------------IQYLFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138 (323)
T ss_dssp S--------------EEEEEEECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred C--------------eEEEEEEcCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE
Confidence 5 67999999999999998854 3469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||++......... .......||+.|+|||++.+. ..++.++|||||||++|+
T Consensus 139 ~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~~ 200 (323)
T 3tki_A 139 DER-------DNLKISDFGLATVFRYNNRE--------RLLNKMCGTLPYVAPELLKRR---EFHAEPVDVWSCGIVLTA 200 (323)
T ss_dssp CTT-------CCEEECCCTTCEECEETTEE--------CCBCSCCSCGGGSCHHHHHCS---SBCHHHHHHHHHHHHHHH
T ss_pred eCC-------CCEEEEEeeccceeccCCcc--------cccCCCccCcCccCcHHhccC---CCCCCcccHHHHHHHHHH
Confidence 987 78999999999765432211 111234699999999999752 334789999999999999
Q ss_pred HHhCCCCCCCCCHHH-HHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1038 LLTLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~e-l~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
|++|..||....... ....+...... .. .....++.+.+|+.+||+.||.+||
T Consensus 201 ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~-------------------------~~~~~~~~~~~li~~~L~~dP~~R~ 254 (323)
T 3tki_A 201 MLAGELPWDQPSDSCQEYSDWKEKKTY-LN-------------------------PWKKIDSAPLALLHKILVENPSARI 254 (323)
T ss_dssp HHHSSCSCSSSCTTSHHHHHHHTTCTT-ST-------------------------TGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHhCCCCCCCCchHHHHHHHHhccccc-CC-------------------------ccccCCHHHHHHHHHHccCChhhCc
Confidence 999999997654321 22222211110 00 0013456689999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001152 1117 TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~ 1129 (1137)
|++|+++|+|+..
T Consensus 255 t~~eil~h~~~~~ 267 (323)
T 3tki_A 255 TIPDIKKDRWYNK 267 (323)
T ss_dssp CHHHHTTCTTTTC
T ss_pred CHHHHhhChhhcc
Confidence 9999999999974
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.6e-39 Score=369.11 Aligned_cols=283 Identities=21% Similarity=0.265 Sum_probs=205.1
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 880 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~~ 880 (1137)
..+|++.++||+|+||+||+|++.+..||||++... ...... ..+|+.++++++|||||++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-----~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~~- 92 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ-----DKQSWQ----NEYEVYSLPGMKHENILQFIGAEKRGTS- 92 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGG-----GHHHHH----HHHHHHTSTTCCCTTBCCEEEEEEEECS-
T ss_pred hhhchhhheecccCceEEEEEEECCCEEEEEEeecC-----chHHHH----HHHHHHHHhcCCCCCchhhcceeccCCC-
Confidence 467999999999999999999999999999986432 122222 2569999999999999999999986441
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CeeeccC
Q 001152 881 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK----------HIMHRDI 950 (1137)
Q Consensus 881 ~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~----------gIIHrDL 950 (1137)
...+.++||||+++|+|.++++. ..+++..++.|+.||+.||+|||+. ||+||||
T Consensus 93 ---------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dl 157 (322)
T 3soc_A 93 ---------VDVDLWLITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDI 157 (322)
T ss_dssp ---------SSEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCC
T ss_pred ---------CCceEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCC
Confidence 12257999999999999999976 3599999999999999999999999 9999999
Q ss_pred CCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccC-CCCCCchhhHH
Q 001152 951 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVDIW 1029 (1137)
Q Consensus 951 KP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~s~ksDVW 1029 (1137)
||+|||++.+ +.+||+|||+++........ .......||+.|+|||++.+... ...++.++|||
T Consensus 158 kp~Nill~~~-------~~~kL~DFg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw 222 (322)
T 3soc_A 158 KSKNVLLKNN-------LTACIADFGLALKFEAGKSA--------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMY 222 (322)
T ss_dssp SGGGEEECTT-------CCEEECCCTTCEEECTTSCC--------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHH
T ss_pred ChHhEEECCC-------CeEEEccCCcccccccccCc--------cccccCccCccccCHhhcccccccCcCCCccchhH
Confidence 9999999877 78999999999765432211 11123469999999999875211 12456789999
Q ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHH-HHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001152 1030 SYGCLLLELLTLQVPYMGLSELEIHDL-IQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1108 (1137)
Q Consensus 1030 SLGviL~ELLTG~~Pf~~~~~~el~~~-I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL 1108 (1137)
||||++|||+||+.||.+......... ......+.......... .................++++.+|+.+||
T Consensus 223 slG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl 296 (322)
T 3soc_A 223 AMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVV------HKKKRPVLRDYWQKHAGMAMLCETIEECW 296 (322)
T ss_dssp HHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHT------TSCCCCCCCGGGGSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhh------cccCCCCccccccccchHHHHHHHHHHHc
Confidence 999999999999999975322110000 00011111110000000 00000000011111255677999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhc
Q 001152 1109 EENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1109 ~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
+.||++|||+.||++.+....
T Consensus 297 ~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 297 DHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp CSSGGGSCCHHHHHHHHHHHH
T ss_pred cCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999988754
No 54
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.4e-39 Score=358.33 Aligned_cols=261 Identities=25% Similarity=0.431 Sum_probs=200.4
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+.+|++.+.||+|+||.||+|.+.+..+|+|+............. ..+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTI----ENVRQEAKLFAMLKHPNIIALRGVCLKEP- 79 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CH----HHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred chhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHH----HHHHHHHHHHHhcCCCCEeeEEEEEecCC-
Confidence 5678999999999999999999999999999985443222111122 33488999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCCCCeE
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH---IMHRDIKSENIL 956 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~g---IIHrDLKP~NIL 956 (1137)
..++||||+++++|.+++.. ..+++..++.|+.||+.||+|||++| |+||||||+|||
T Consensus 80 -------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil 140 (271)
T 3dtc_A 80 -------------NLCLVMEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL 140 (271)
T ss_dssp --------------CEEEEECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEE
T ss_pred -------------ceEEEEEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEE
Confidence 45999999999999998853 46999999999999999999999999 899999999999
Q ss_pred ecccccc-CCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 957 IDLERKK-ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 957 ld~~~~~-~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
++.+... ....+.+||+|||++........ ....||+.|+|||++.+ ..++.++||||||+++
T Consensus 141 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 204 (271)
T 3dtc_A 141 ILQKVENGDLSNKILKITDFGLAREWHRTTK------------MSAAGAYAWMAPEVIRA----SMFSKGSDVWSYGVLL 204 (271)
T ss_dssp ESSCCSSSCCSSCCEEECCCCC-------------------------CCGGGSCHHHHHH----CCCSHHHHHHHHHHHH
T ss_pred EecccccccccCcceEEccCCcccccccccc------------cCCCCccceeCHHHhcc----CCCCchhhHHHHHHHH
Confidence 9864210 11237799999999875443211 13368999999999876 4688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCC-CchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|+|++|+.||.+.........+...... ..+ ..+++.+.+++.+||+.||.+
T Consensus 205 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~ 257 (271)
T 3dtc_A 205 WELLTGEVPFRGIDGLAVAYGVAMNKLALPIP---------------------------STCPEPFAKLMEDCWNPDPHS 257 (271)
T ss_dssp HHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCC---------------------------cccCHHHHHHHHHHhcCCccc
Confidence 9999999999988777666655443321 111 134556999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001152 1115 RPTAGDLYEMFVA 1127 (1137)
Q Consensus 1115 RPSa~EVL~~L~~ 1127 (1137)
|||+.|+++++..
T Consensus 258 Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 258 RPSFTNILDQLTT 270 (271)
T ss_dssp SCCHHHHHHHHHC
T ss_pred CcCHHHHHHHHhc
Confidence 9999999999864
No 55
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.4e-39 Score=372.61 Aligned_cols=266 Identities=25% Similarity=0.367 Sum_probs=219.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~~~ 878 (1137)
.+|++.+.||+|+||.||+|.+. +..||||+.............+.+...+.+|+.+++++ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 46999999999999999999985 67899998765544444555556666778999999999 7999999999998665
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++
T Consensus 174 --------------~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 174 --------------FMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234 (365)
T ss_dssp --------------EEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------EEEEEEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 67999999999999999976 24699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccC--CCCCCchhhHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK--PNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~~s~ksDVWSLGviL~ 1036 (1137)
.+ +.+||+|||++........ .....||+.|+|||++.+... ...++.++|||||||++|
T Consensus 235 ~~-------~~ikl~DfG~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ 296 (365)
T 2y7j_A 235 DN-------MQIRLSDFGFSCHLEPGEK-----------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296 (365)
T ss_dssp TT-------CCEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHH
T ss_pred CC-------CCEEEEecCcccccCCCcc-----------cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHH
Confidence 87 7899999999876543221 113469999999999875311 235789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|++|..||...........+..+........+. ..++.+.+++.+||+.||.+||
T Consensus 297 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~------------------------~~~~~~~~li~~~L~~dP~~Rp 352 (365)
T 2y7j_A 297 TLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWD------------------------DRSSTVKDLISRLLQVDPEARL 352 (365)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHS------------------------SSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccc------------------------cCCHHHHHHHHHHcCCChhHCc
Confidence 9999999999888777777776554332211110 3345699999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001152 1117 TAGDLYEMFVAR 1128 (1137)
Q Consensus 1117 Sa~EVL~~L~~~ 1128 (1137)
|++|+++|+|+.
T Consensus 353 s~~ell~hp~f~ 364 (365)
T 2y7j_A 353 TAEQALQHPFFE 364 (365)
T ss_dssp CHHHHHHSGGGC
T ss_pred CHHHHhcCcccC
Confidence 999999999986
No 56
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.7e-39 Score=366.35 Aligned_cols=288 Identities=21% Similarity=0.291 Sum_probs=198.4
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
+..+|++.+.||+|+||+||+|.+. +..||+|+....... ...+ .+.+|+.++++++||||+++++++.+.
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~ 75 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE---GTPS----TAIREISLMKELKHENIVRLYDVIHTE 75 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTT---CSCH----HHHHHHHHHTTCCBTTBCCEEEEECCT
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc---ccHH----HHHHHHHHHHhcCCCCcceEEEEEEEC
Confidence 3568999999999999999999875 577888886543321 1112 237899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~-~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
+ ..++||||++ ++|.+++..... .....+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 76 ~--------------~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl 140 (317)
T 2pmi_A 76 N--------------KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLL 140 (317)
T ss_dssp T--------------EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred C--------------eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeE
Confidence 5 6799999998 699999876422 12245899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++|
T Consensus 141 ~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 200 (317)
T 2pmi_A 141 INKR-------GQLKLGDFGLARAFGIPVN----------TFSSEVVTLWYRAPDVLMG---SRTYSTSIDIWSCGCILA 200 (317)
T ss_dssp ECTT-------CCEEECCCSSCEETTSCCC----------CCCCCCSCCTTCCHHHHTT---CCCCCTHHHHHHHHHHHH
T ss_pred EcCC-------CCEEECcCccceecCCCcc----------cCCCCcccccccCchHhhC---CCCCCcHHHHHHHHHHHH
Confidence 9987 7899999999976543211 1123468999999999874 246789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcC--CCCC-chhHHhhhcccccccccccCCCCC----CchhhhhhHHHHHHHHHHhcc
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMG--KRPR-LTDELEALGSCHEHEVAQSGSGFE----KPEAELETLSFLVDVFRRCTE 1109 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g--~~p~-l~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~L~dLl~~CL~ 1109 (1137)
+|++|+.||.+....+....+... ..+. ............ ........... .+......++++.+|+.+||+
T Consensus 201 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 279 (317)
T 2pmi_A 201 EMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN-PNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQ 279 (317)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCC-TTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSC
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcc-cccccccchhHHHhhcccccccCCHHHHHHHHHHCC
Confidence 999999999988877766666331 1111 111111100000 00000000000 000011345679999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001152 1110 ENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1110 ~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
.||++|||++|+++|+|+...
T Consensus 280 ~dP~~Rpt~~e~l~hp~f~~~ 300 (317)
T 2pmi_A 280 LNPDMRLSAKQALHHPWFAEY 300 (317)
T ss_dssp SSGGGSCCHHHHTTSGGGGGG
T ss_pred CCcccCCCHHHHhCChhhhcc
Confidence 999999999999999999854
No 57
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.6e-39 Score=380.84 Aligned_cols=258 Identities=21% Similarity=0.343 Sum_probs=204.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEe
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 875 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~ 875 (1137)
..+.+|++.++||+|+||.||+|++. +..+|+|+.+...... ....+ .+.+|+.++.++ +|||||++++++.
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-~~~~~----~~~~E~~il~~~~~hp~Iv~l~~~~~ 123 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-DEDID----WVQTEKHVFEQASNHPFLVGLHSCFQ 123 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CC----HHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHH----HHHHHHHHHHhcCCCCCcCeeEEEEE
Confidence 45788999999999999999999985 4678888865433221 12222 247799999887 7999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+.. ..++||||++||+|..++.. ...+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 124 ~~~--------------~~~lV~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NI 184 (396)
T 4dc2_A 124 TES--------------RLFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 184 (396)
T ss_dssp CSS--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred ECC--------------EEEEEEEcCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHE
Confidence 765 67999999999999999976 24699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 185 Ll~~~-------g~ikL~DFGla~~~~~~~~----------~~~~~~gt~~Y~aPE~l~~----~~~~~~~DiwslGvll 243 (396)
T 4dc2_A 185 LLDSE-------GHIKLTDYGMCKEGLRPGD----------TTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGVLM 243 (396)
T ss_dssp EECTT-------SCEEECCCTTCBCCCCTTC----------CBCCCCBCGGGCCHHHHTT----CCBCTHHHHHHHHHHH
T ss_pred EECCC-------CCEEEeecceeeecccCCC----------ccccccCCcccCCchhhcC----CCCChHHHHHHHHHHH
Confidence 99987 7899999999975322111 1124579999999999976 5689999999999999
Q ss_pred HHHHhCCCCCCCCC---------HHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001152 1036 LELLTLQVPYMGLS---------ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1106 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~---------~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~ 1106 (1137)
|||++|..||.... ...+...+..... .++. ..++++.+||.+
T Consensus 244 yell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~---------------------------~~s~~~~~li~~ 295 (396)
T 4dc2_A 244 FEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR---------------------------SLSVKAASVLKS 295 (396)
T ss_dssp HHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHHHHH
T ss_pred HHHHhCCCCCcccccccccchhhHHHHHHHHhcccc-CCCC---------------------------cCCHHHHHHHHH
Confidence 99999999996422 1223333333221 1111 344569999999
Q ss_pred hcccCCCCCCCH------HHHHHHHHhhc
Q 001152 1107 CTEENPTERPTA------GDLYEMFVART 1129 (1137)
Q Consensus 1107 CL~~DP~~RPSa------~EVL~~L~~~~ 1129 (1137)
||+.||.+||++ +||++|+||..
T Consensus 296 lL~~dP~~R~~~~~~~~~~ei~~Hpff~~ 324 (396)
T 4dc2_A 296 FLNKDPKERLGCHPQTGFADIQGHPFFRN 324 (396)
T ss_dssp HTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred HhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence 999999999984 89999999964
No 58
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-39 Score=359.08 Aligned_cols=261 Identities=22% Similarity=0.296 Sum_probs=205.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
++|++.+.||+|+||+||+|.+. +..+|+|+......... .+. +.+|+.++++++||||+++++++.+..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~~- 93 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP---MEQ----IEAEIEVLKSLDHPNIIKIFEVFEDYH- 93 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSC---HHH----HHHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchh---HHH----HHHHHHHHHhCCCchHHhHHHheecCC-
Confidence 56999999999999999999985 46788887654432211 222 378999999999999999999998665
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++...... ...+++..++.|+.||+.||+|||++||+||||||+|||++.
T Consensus 94 -------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~ 159 (285)
T 3is5_A 94 -------------NMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQD 159 (285)
T ss_dssp -------------EEEEEECCCSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESS
T ss_pred -------------eEEEEEEeCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEec
Confidence 679999999999999998764333 256999999999999999999999999999999999999964
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+. ..+.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus 160 ~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~il~~ll 219 (285)
T 3is5_A 160 TS----PHSPIKIIDFGLAELFKSDEH-----------STNAAGTALYMAPEVFKR-----DVTFKCDIWSAGVVMYFLL 219 (285)
T ss_dssp SS----TTCCEEECCCCCCCC---------------------CTTGGGCCHHHHTT-----CCCHHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEEeeecceecCCccc-----------CcCcccccCcCChHHhcc-----CCCcccCeehHHHHHHHHH
Confidence 31 226799999999975443211 123468999999999853 5789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|+.||.+....++...+.......... ....++++.+|+.+||+.||.+|||+.
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~ 274 (285)
T 3is5_A 220 TGCLPFTGTSLEEVQQKATYKEPNYAVE-------------------------CRPLTPQAVDLLKQMLTKDPERRPSAA 274 (285)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCC---------------------------CCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHhhhccCCcccccc-------------------------cCcCCHHHHHHHHHHccCChhhCcCHH
Confidence 9999999888777766654433211100 002345689999999999999999999
Q ss_pred HHHHHHHhhc
Q 001152 1120 DLYEMFVART 1129 (1137)
Q Consensus 1120 EVL~~L~~~~ 1129 (1137)
||++|+|++.
T Consensus 275 e~l~hp~f~~ 284 (285)
T 3is5_A 275 QVLHHEWFKQ 284 (285)
T ss_dssp HHHTSGGGGC
T ss_pred HHhcCHHhhc
Confidence 9999999975
No 59
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-39 Score=379.46 Aligned_cols=260 Identities=20% Similarity=0.279 Sum_probs=211.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
.++|++.+.||+|+||.||+|.+. +..+|+|+..... ..+.. .+.+|+.+|+.++|||||++++++.+..
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~----~~~~E~~il~~l~hpnIv~~~~~~~~~~ 121 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKY----TVKNEISIMNQLHHPKLINLHDAFEDKY 121 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHH----HHHHHHHHHTTCCSTTBCCEEEEEECSS
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHH----HHHHHHHHHHhCCCcCCCeEEEEEEeCC
Confidence 467999999999999999999985 4668888754221 22222 3488999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 122 --------------~~~lv~E~~~gg~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~ 183 (387)
T 1kob_A 122 --------------EMVLILEFLSGGELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCE 183 (387)
T ss_dssp --------------EEEEEEECCCCCBHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEEcCCCCcHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEe
Confidence 67999999999999998864 234699999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+. .+.+||+|||++......... ....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 184 ~~~-----~~~vkL~DFG~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~el 243 (387)
T 1kob_A 184 TKK-----ASSVKIIDFGLATKLNPDEIV-----------KVTTATAEFAAPEIVDR----EPVGFYTDMWAIGVLGYVL 243 (387)
T ss_dssp STT-----CCCEEECCCTTCEECCTTSCE-----------EEECSSGGGCCHHHHTT----CCBCHHHHHHHHHHHHHHH
T ss_pred cCC-----CCceEEEecccceecCCCcce-----------eeeccCCCccCchhccC----CCCCCcccEeeHhHHHHHH
Confidence 542 267999999999765432111 13368999999999875 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+.+..+....+........... ....++++.+||.+||+.||.+|||+
T Consensus 244 ltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dP~~Rpt~ 299 (387)
T 1kob_A 244 LSGLSPFAGEDDLETLQNVKRCDWEFDEDA------------------------FSSVSPEAKDFIKNLLQKEPRKRLTV 299 (387)
T ss_dssp HHSCCSSCCSSHHHHHHHHHHCCCCCCSST------------------------TTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCccc------------------------cccCCHHHHHHHHHHcCCChhHCcCH
Confidence 999999999888777777755432211100 01345669999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
.|+++|+|+...
T Consensus 300 ~ell~hp~~~~~ 311 (387)
T 1kob_A 300 HDALEHPWLKGD 311 (387)
T ss_dssp HHHHTSTTTSSC
T ss_pred HHHhhCccccCC
Confidence 999999999754
No 60
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.1e-39 Score=384.01 Aligned_cols=265 Identities=22% Similarity=0.288 Sum_probs=212.0
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+|++.++||+|+||+||+|++. +..+|+|+..... ...+.....+.+|+.+++.++|||||++++++.+.
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~-----~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhh-----hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3568999999999999999999985 4678888754321 00111112347899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
. ..|+||||++||+|.++++. ..+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 142 ~--------------~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl 201 (410)
T 3v8s_A 142 R--------------YLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201 (410)
T ss_dssp S--------------EEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred C--------------EEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE
Confidence 5 67999999999999999875 358999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||+++........ .....+||+.|+|||++.+......++.++|||||||++||
T Consensus 202 ~~~-------g~ikL~DFG~a~~~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilye 265 (410)
T 3v8s_A 202 DKS-------GHLKLADFGTCMKMNKEGMV---------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 265 (410)
T ss_dssp CTT-------SCEEECCCTTCEECCTTSEE---------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeccceeEeeccCCcc---------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHH
Confidence 987 78999999999765432211 11245799999999999863222237899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE-- 1114 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~-- 1114 (1137)
|++|..||.+.+..+....+..+.. ..++. ....++++.+||.+||+.+|.+
T Consensus 266 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~~~~s~~~~~li~~lL~~~~~rlg 320 (410)
T 3v8s_A 266 MLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-------------------------DNDISKEAKNLICAFLTDREVRLG 320 (410)
T ss_dssp HHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT-------------------------TCCCCHHHHHHHHHHSSCGGGCTT
T ss_pred HHhCCCCCCCCChhhHHHHHHhccccccCCC-------------------------cccccHHHHHHHHHHccChhhhCC
Confidence 9999999999888888777754210 00110 0034556999999999999988
Q ss_pred CCCHHHHHHHHHhhcC
Q 001152 1115 RPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~ 1130 (1137)
||+++||++|+|++..
T Consensus 321 R~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 321 RNGVEEIKRHLFFKND 336 (410)
T ss_dssp SSCHHHHHTSGGGCCS
T ss_pred CCCHHHHhcCccccCC
Confidence 9999999999999764
No 61
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.7e-39 Score=370.60 Aligned_cols=283 Identities=20% Similarity=0.255 Sum_probs=210.4
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-----CCCcceeeeeE
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----HSCIVEMYGHK 874 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-----HpNIVkllg~~ 874 (1137)
.+|++.++||+|+||+||+|++ .+..||+|+.... ....+. +.+|+.+++.+. |||||++++++
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~----~~~e~~~l~~l~~~~~~h~~iv~~~~~~ 105 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRS----AKIEADILKKIQNDDINNNNIVKYHGKF 105 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHH----HHHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhh----hHHHHHHHHHhcccCCCCCCeeccccee
Confidence 6799999999999999999998 4567899985321 222222 367999999986 99999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
...+ ..++||||+ +++|.+++... ....+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 106 ~~~~--------------~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N 167 (360)
T 3llt_A 106 MYYD--------------HMCLIFEPL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPEN 167 (360)
T ss_dssp EETT--------------EEEEEECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred eECC--------------eeEEEEcCC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCccc
Confidence 8765 679999999 89999999862 23459999999999999999999999999999999999
Q ss_pred eEecccccc------------------CCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccc
Q 001152 955 ILIDLERKK------------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM 1016 (1137)
Q Consensus 955 ILld~~~~~------------------~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 1016 (1137)
||++..... ....+.+||+|||++....... ....||+.|+|||++.+
T Consensus 168 Ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-------------~~~~gt~~y~aPE~~~~- 233 (360)
T 3llt_A 168 ILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-------------GSIINTRQYRAPEVILN- 233 (360)
T ss_dssp EEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-------------CSCCSCGGGCCHHHHTT-
T ss_pred EEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-------------cCccCcccccCcHHHcC-
Confidence 999752000 0113789999999987543211 13468999999999976
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhccccc-ccccc-----cCCCCC--
Q 001152 1017 HKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-HEVAQ-----SGSGFE-- 1088 (1137)
Q Consensus 1017 ~~~~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~-~~~~~-----~~~~~~-- 1088 (1137)
..++.++|||||||++|+|++|+.||......+....+.....+.............. ..... ......
T Consensus 234 ---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 310 (360)
T 3llt_A 234 ---LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASS 310 (360)
T ss_dssp ---CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSC
T ss_pred ---CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccc
Confidence 5688999999999999999999999998888777777655443332222211110000 00000 000000
Q ss_pred ----------CchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001152 1089 ----------KPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1089 ----------~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
.+.......+.+.+|+.+||+.||.+|||++|+++|+|++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 311 INSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred hhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 0111112336788999999999999999999999999985
No 62
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.3e-39 Score=363.53 Aligned_cols=268 Identities=24% Similarity=0.360 Sum_probs=206.3
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
....+|++.++||+|+||+||+|++.+ .+|+|+.+ .........+. +.+|+.++++++||||+++++++...
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k--~~~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~- 104 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK--VVDPTPEQFQA----FRNEVAVLRKTRHVNILLFMGYMTKD- 104 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESSS-EEEEEECC--CSSCCHHHHHH----HHHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred ecccceEEEeEecCCCCeEEEEEEECC-EEEEEEEe--cCCCCHHHHHH----HHHHHHHHHhCCCCCEEEEEEEEccC-
Confidence 445789999999999999999999865 47888743 33333444444 48899999999999999999987543
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ....+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 105 --------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~ 166 (307)
T 3lb7_A 105 --------------NLAIVTQWCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH 166 (307)
T ss_dssp --------------SCEEEEECCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEEC
T ss_pred --------------cEEEEEecCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEc
Confidence 34899999999999999874 235799999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++......... .......||+.|+|||++... ....++.++|||||||++|+|
T Consensus 167 ~~-------~~~kl~DFg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~Di~slG~il~el 230 (307)
T 3lb7_A 167 EG-------LTVKIGDFGLATVKSRWSGS--------QQVEQPTGSVLWMAPEVIRMQ-DNNPFSFQSDVYSYGIVLYEL 230 (307)
T ss_dssp TT-------SCEEECCCCSSCC--------------------CCCCTTSCCHHHHHCC-SSCCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccCCCceeccccccc--------ccccCCCCCcceECcceeecc-CCCCCCchhhHHHHHHHHHHH
Confidence 87 78999999998754321111 111234699999999998632 235688999999999999999
Q ss_pred HhCCCCCCCCCHHH-HHHHHHcCCCC-CchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1039 LTLQVPYMGLSELE-IHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~e-l~~~I~~g~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
++|+.||......+ +...+..+... .+.. ....+++.+.+++.+||+.||++||
T Consensus 231 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~~p~~RP 286 (307)
T 3lb7_A 231 MTGELPYSHINNRDQIIFMVGRGYASPDLSK------------------------LYKNCPKAMKRLVADCVKKVKEERP 286 (307)
T ss_dssp HHSSCTTTTCCCHHHHHHHHHHTCCCCCSTT------------------------SCSSSCHHHHHHHHHHSCSSSTTSC
T ss_pred HhCCCCCccCCcHHHHHHHHhcCCCCcchhh------------------------hhcCCcHHHHHHHHHHhhCChhhCc
Confidence 99999998755444 33333333221 1110 0014456799999999999999999
Q ss_pred CHHHHHHHHHhhcCCC
Q 001152 1117 TAGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ss 1132 (1137)
++.||+++++....+.
T Consensus 287 s~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 287 LFPQILSSIELLQHSL 302 (307)
T ss_dssp CHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhhc
Confidence 9999999999886543
No 63
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-39 Score=370.12 Aligned_cols=275 Identities=23% Similarity=0.243 Sum_probs=209.9
Q ss_pred CCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~-~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
.+|++.+.||+|+||+||+|.+.. ..+|+|+....... ......+ ++.+|+.++++++||||+++++++.+..
T Consensus 26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVE----RIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHH----HHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHH----HHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 469999999999999999999854 56888876433211 1112222 3488999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------------------------------CCCCCCH
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------------------------------GEKHVSV 923 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-----------------------------------~~~~ls~ 923 (1137)
..++||||+++|+|.+++...... ....+++
T Consensus 102 --------------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (345)
T 3hko_A 102 --------------YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167 (345)
T ss_dssp --------------EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHH
T ss_pred --------------eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccH
Confidence 679999999999999988521110 1223567
Q ss_pred HHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccC
Q 001152 924 KLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVG 1003 (1137)
Q Consensus 924 ~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~G 1003 (1137)
..++.|+.||+.||+|||++||+||||||+|||++.+. .+.+||+|||++.......... ........|
T Consensus 168 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-----~~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~g 236 (345)
T 3hko_A 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK-----SFEIKLVDFGLSKEFYKLNNGE------YYGMTTKAG 236 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS-----SCCEEECCCTTCEEGGGTTCC--------------CC
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCC-----CceEEEeeccccccccccCccc------cccccccCC
Confidence 88999999999999999999999999999999998652 1479999999997654322110 011124469
Q ss_pred CCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhccccccccccc
Q 001152 1004 TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS 1083 (1137)
Q Consensus 1004 T~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~ 1083 (1137)
|+.|+|||++.+ ....++.++|||||||++|+|++|+.||.+....+....+............
T Consensus 237 t~~y~aPE~~~~--~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------------- 300 (345)
T 3hko_A 237 TPYFVAPEVLNT--TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNY-------------- 300 (345)
T ss_dssp CGGGCCHHHHTC--SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGG--------------
T ss_pred CccccCchhhcc--CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCccc--------------
Confidence 999999999875 2356889999999999999999999999988887777776554422111110
Q ss_pred CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001152 1084 GSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1084 ~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~s 1131 (1137)
...++++.+|+.+||+.||.+|||+.|+++|+|+....
T Consensus 301 ----------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~ 338 (345)
T 3hko_A 301 ----------NVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338 (345)
T ss_dssp ----------GGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred ----------ccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence 13456799999999999999999999999999998654
No 64
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3e-39 Score=355.87 Aligned_cols=256 Identities=21% Similarity=0.351 Sum_probs=210.5
Q ss_pred CCCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..+|++.+.||+|+||.||+|.+ .+..+|+|+..... ... +. +.+|+.++++++||||+++++++.+..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~---~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~- 78 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSE---ED----FIEEAEVMMKLSHPKLVQLYGVCLEQA- 78 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS--BCH---HH----HHHHHHHHHTCCCTTBCCEEEEECSSS-
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc--cCH---HH----HHHHHHHHHhCCCCCEeeEEEEEecCC-
Confidence 46799999999999999999998 45678888854321 111 22 378999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++.. ....+++..++.|+.||+.||+|||++||+||||||+||+++.
T Consensus 79 -------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~ 141 (269)
T 4hcu_A 79 -------------PICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 141 (269)
T ss_dssp -------------SEEEEEECCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG
T ss_pred -------------ceEEEEEeCCCCcHHHHHHh----cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcC
Confidence 56999999999999999975 2346999999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 142 ~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~ll 201 (269)
T 4hcu_A 142 N-------QVIKVSDFGMTRFVLDDQYT---------SSTGTKFPVKWASPEVFSF----SRYSSKSDVWSFGVLMWEVF 201 (269)
T ss_dssp G-------GCEEECCTTGGGGBCCHHHH---------STTSTTCCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEeccccccccccccccc---------cccCcccccccCCHHHhcC----CCCCchhhhHHHHHHHHHHh
Confidence 7 78999999998765432211 0112357889999999976 46889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 T-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+ |..||......+....+..+..+..+. ..++++.+++.+||+.||.+|||+
T Consensus 202 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~Rps~ 254 (269)
T 4hcu_A 202 SEGKIPYENRSNSEVVEDISTGFRLYKPR---------------------------LASTHVYQIMNHCWRERPEDRPAF 254 (269)
T ss_dssp TTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCCCCCCCCCCHHHHHHHHhcCccCCCCC---------------------------cCCHHHHHHHHHHccCCcccCcCH
Confidence 9 999999988888887776654332221 234559999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
.|+++++.....
T Consensus 255 ~~ll~~l~~l~~ 266 (269)
T 4hcu_A 255 SRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987654
No 65
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=376.90 Aligned_cols=261 Identities=23% Similarity=0.309 Sum_probs=208.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
...+.+|++.+.||+|+||.||+|.+.. ..+|+|+...... ........+.+|+.+|+.++|||||++++++.
T Consensus 11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 85 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-----VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ 85 (384)
T ss_dssp CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-----ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 3457889999999999999999999854 5688887543211 11111234588999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+.. ..|+||||++||+|..++.. ...+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 86 ~~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI 146 (384)
T 4fr4_A 86 DEE--------------DMFMVVDLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNI 146 (384)
T ss_dssp CSS--------------EEEEEECCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred eCC--------------EEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHe
Confidence 765 67999999999999999975 34699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||+++....... .....||+.|+|||++.+. ....++.++|||||||++
T Consensus 147 ll~~~-------g~vkL~DFG~a~~~~~~~~-----------~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~il 207 (384)
T 4fr4_A 147 LLDEH-------GHVHITDFNIAAMLPRETQ-----------ITTMAGTKPYMAPEMFSSR-KGAGYSFAVDWWSLGVTA 207 (384)
T ss_dssp EECTT-------SCEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCGGGTCCC-SSCCBCTTHHHHHHHHHH
T ss_pred EECCC-------CCEEEeccceeeeccCCCc-----------eeccCCCccccCCeeeccC-CCCCCCccceeechHHHH
Confidence 99987 7899999999976543211 1245799999999998742 124588999999999999
Q ss_pred HHHHhCCCCCCCC---CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1036 LELLTLQVPYMGL---SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~---~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
|+|++|..||... ...++...+...... ++. ..++++.+||.+||+.||
T Consensus 208 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-~p~---------------------------~~s~~~~~li~~lL~~dP 259 (384)
T 4fr4_A 208 YELLRGRRPYHIRSSTSSKEIVHTFETTVVT-YPS---------------------------AWSQEMVSLLKKLLEPNP 259 (384)
T ss_dssp HHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHSCSSG
T ss_pred HHHHhCCCCCCCCCCccHHHHHHHHhhcccC-CCC---------------------------cCCHHHHHHHHHHhcCCH
Confidence 9999999999753 333444444332211 110 334569999999999999
Q ss_pred CCCCC-HHHHHHHHHhhc
Q 001152 1113 TERPT-AGDLYEMFVART 1129 (1137)
Q Consensus 1113 ~~RPS-a~EVL~~L~~~~ 1129 (1137)
.+||+ +++|++|+|+..
T Consensus 260 ~~R~s~~~~l~~hp~f~~ 277 (384)
T 4fr4_A 260 DQRFSQLSDVQNFPYMND 277 (384)
T ss_dssp GGSCCSHHHHHTSGGGTT
T ss_pred hHhcccHHHHHcChhhhc
Confidence 99998 999999999964
No 66
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=364.06 Aligned_cols=291 Identities=21% Similarity=0.219 Sum_probs=207.7
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC---CCCCcceeeeeEe
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKI 875 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L---~HpNIVkllg~~~ 875 (1137)
..+|++.+.||+|+||+||+|++ .+..||+|+............ ....+.+|+.+++.+ .||||+++++++.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGG---LPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSC---CCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccc---cchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 46899999999999999999996 457899998654432211110 111225677776666 4999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
.... ......++||||+. ++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 85 ~~~~---------~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Ni 151 (308)
T 3g33_A 85 TSRT---------DREIKVTLVFEHVD-QDLRTYLDK---APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 151 (308)
T ss_dssp ECCS---------SSEEEEEEEEECCC-CBHHHHHHT---CCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTE
T ss_pred ccCC---------CCceeEEEEehhhh-cCHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence 6431 11235799999997 699999976 2334599999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 152 l~~~~-------~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 209 (308)
T 3g33_A 152 LVTSG-------GTVKLADFGLARIYSYQMA-----------LTPVVVTLWYRAPEVLLQ----STYATPVDMWSVGCIF 209 (308)
T ss_dssp EECTT-------SCEEECSCSCTTTSTTCCC-----------SGGGGCCCSSCCHHHHHT----SCCCSTHHHHHHHHHH
T ss_pred EEcCC-------CCEEEeeCccccccCCCcc-----------cCCccccccccCchHHcC----CCCCchHHHHHHHHHH
Confidence 99877 7899999999875543211 124578999999999975 4688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|+|++|..||.+....+....+...........+........... ...............++++.+|+.+||+.||++|
T Consensus 210 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 288 (308)
T 3g33_A 210 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF-PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKR 288 (308)
T ss_dssp HHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGS-CCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcccccc-CCCCCCcHHHhCccccHHHHHHHHHHhcCCCccC
Confidence 999999999999888777666633211111111110000000000 0000000111122556789999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001152 1116 PTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~ 1130 (1137)
||+.|+++|+|+...
T Consensus 289 ~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 289 ISAFRALQHSYLHKD 303 (308)
T ss_dssp CCHHHHHTSTTC---
T ss_pred CCHHHHhcCccccCC
Confidence 999999999999864
No 67
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.4e-39 Score=376.93 Aligned_cols=296 Identities=20% Similarity=0.226 Sum_probs=210.5
Q ss_pred CCCCceEeeeeccc--CceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 800 SFPSLSSCDEAGKS--VSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 800 ~~~~y~l~~~LG~G--sfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
...+|++.++||+| +||.||+|++. +..||+|+..... ......+ .+.+|+.+++.++|||||++++++.
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~ 96 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA--CSNEMVT----FLQGELHVSKLFNHPNIVPYRATFI 96 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHH----HHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc--cChHHHH----HHHHHHHHHHhCCCCCCCcEeEEEE
Confidence 45789999999999 99999999985 5778898865432 2233333 3488999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+.+ ..++||||+++++|.+++... ....+++..+..|+.||+.||+|||++||+||||||+||
T Consensus 97 ~~~--------------~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NI 159 (389)
T 3gni_B 97 ADN--------------ELWVVTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHI 159 (389)
T ss_dssp ETT--------------EEEEEEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred ECC--------------EEEEEEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 765 679999999999999999762 224699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||.+............ .........||+.|+|||++.+ ....++.++|||||||++
T Consensus 160 ll~~~-------~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~DiwslG~il 227 (389)
T 3gni_B 160 LISVD-------GKVYLSGLRSNLSMISHGQRQRV---VHDFPKYSVKVLPWLSPEVLQQ--NLQGYDAKSDIYSVGITA 227 (389)
T ss_dssp EECTT-------CCEEECCGGGCEECEETTEECSC---BCCCCTTCTTTGGGSCHHHHST--TSSCBCTHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEcccccceeeccccccccc---cccccccccccccccCHHHHhc--cCCCCCcHhHHHHHHHHH
Confidence 99877 78999999988654332211100 0011223479999999999975 224688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhc---------cccc----ccccc-----cCCCCCCchhhhhhH
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALG---------SCHE----HEVAQ-----SGSGFEKPEAELETL 1097 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~---------~~~~----~~~~~-----~~~~~~~~~~~~~~~ 1097 (1137)
|+|++|+.||.+....+....+..+..+.+........ .... ..... ..............+
T Consensus 228 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 307 (389)
T 3gni_B 228 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFS 307 (389)
T ss_dssp HHHHHSSCTTTTCCSTTHHHHC--------------------------------------------------------CC
T ss_pred HHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccC
Confidence 99999999998765554444333222211110000000 0000 00000 000000001122456
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1098 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1098 ~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
+++.+|+.+||+.||.+|||++|+++|+|+...
T Consensus 308 ~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 308 PHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 789999999999999999999999999999753
No 68
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6e-39 Score=356.32 Aligned_cols=257 Identities=21% Similarity=0.261 Sum_probs=210.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
..+++|++.+.||+|+||.||+|++.. ..+|+|+..... ........++.+|+.+++.++||||+++++++.+
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 85 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-----LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD 85 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccc-----cchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc
Confidence 356789999999999999999999864 568888754321 1111223345889999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.+ ..++||||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+
T Consensus 86 ~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil 146 (284)
T 2vgo_A 86 RK--------------RIYLMLEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLL 146 (284)
T ss_dssp SS--------------EEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEE
T ss_pred CC--------------EEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEE
Confidence 65 679999999999999999762 35899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++||||||+++|
T Consensus 147 ~~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~ 203 (284)
T 2vgo_A 147 MGYK-------GELKIADFGWSVHAPSLR------------RRTMCGTLDYLPPEMIEG----KTHDEKVDLWCAGVLCY 203 (284)
T ss_dssp ECTT-------CCEEECCCTTCEECSSSC------------BCCCCSCGGGCCHHHHTT----CCBCTTHHHHHHHHHHH
T ss_pred EcCC-------CCEEEecccccccCcccc------------cccccCCCCcCCHHHhcc----CCCCcccchhhHHHHHH
Confidence 9877 789999999886543211 113468999999999875 46789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|++|..||......+....+...... ++. ..++.+.+++.+||+.||.+||
T Consensus 204 ~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~li~~~l~~~p~~Rp 255 (284)
T 2vgo_A 204 EFLVGMPPFDSPSHTETHRRIVNVDLK-FPP---------------------------FLSDGSKDLISKLLRYHPPQRL 255 (284)
T ss_dssp HHHHSSCTTCCSSHHHHHHHHHTTCCC-CCT---------------------------TSCHHHHHHHHHHSCSSGGGSC
T ss_pred HHHHCCCCCCCCCHhHHHHHHhccccC-CCC---------------------------cCCHHHHHHHHHHhhcCHhhCC
Confidence 999999999987777766666543221 110 2345689999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|++|+++|+|+...
T Consensus 256 s~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 256 PLKGVMEHPWVKAN 269 (284)
T ss_dssp CHHHHHTCHHHHHH
T ss_pred CHHHHhhCHHHHhh
Confidence 99999999999854
No 69
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4e-39 Score=366.85 Aligned_cols=266 Identities=23% Similarity=0.370 Sum_probs=212.6
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 872 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg 872 (1137)
...+|++.+.||+|+||.||+|++.+ ..||+|+.... . .....+ .+.+|+.++++++||||+++++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~-~~~~~~----~~~~E~~~l~~l~hp~iv~~~~ 117 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--A-SADMQA----DFQREAALMAEFDNPNIVKLLG 117 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT--C-CHHHHH----HHHHHHHHHHTCCCTTBCCEEE
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc--c-CHHHHH----HHHHHHHHHHhCCCCCEEEEEE
Confidence 34679999999999999999999853 56888874322 1 222233 3489999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-------------------CCCCCCHHHHHHHHHHH
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-------------------GEKHVSVKLALFIAQDV 933 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-------------------~~~~ls~~~i~~I~~QI 933 (1137)
++.+.+ ..++||||+++++|.+++...... ....+++..++.|+.||
T Consensus 118 ~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 183 (343)
T 1luf_A 118 VCAVGK--------------PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQV 183 (343)
T ss_dssp EECSSS--------------SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHH
T ss_pred EEccCC--------------ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence 998765 459999999999999999863211 12569999999999999
Q ss_pred HHHHHHHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhh
Q 001152 934 AAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVL 1013 (1137)
Q Consensus 934 a~gL~yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 1013 (1137)
+.||+|||++||+||||||+|||++.+ +.+||+|||++......... .......+|+.|+|||++
T Consensus 184 ~~~l~~LH~~~ivH~Dlkp~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~ 248 (343)
T 1luf_A 184 AAGMAYLSERKFVHRDLATRNCLVGEN-------MVVKIADFGLSRNIYSADYY--------KADGNDAIPIRWMPPESI 248 (343)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECGG-------GCEEECCCSCHHHHTGGGCB--------C----CCBCGGGCCHHHH
T ss_pred HHHHHHHHhCCeecCCCCcceEEECCC-------CeEEEeecCCCcccccCccc--------cccCCCcccceecChhhh
Confidence 999999999999999999999999987 78999999998765432211 111234578899999998
Q ss_pred ccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchh
Q 001152 1014 RAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA 1092 (1137)
Q Consensus 1014 ~~~~~~~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1137)
.+ ..++.++|||||||++|+|++ |..||.+....++...+..+..+..+.
T Consensus 249 ~~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------- 299 (343)
T 1luf_A 249 FY----NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE------------------------- 299 (343)
T ss_dssp HH----CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCT-------------------------
T ss_pred cc----CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCC-------------------------
Confidence 76 468899999999999999999 999999988888887776655433221
Q ss_pred hhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 001152 1093 ELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1093 ~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ss 1132 (1137)
.+++++.+++.+||+.||.+|||+.+|++++.......
T Consensus 300 --~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 300 --NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred --CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 33456999999999999999999999999998875533
No 70
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=373.55 Aligned_cols=255 Identities=20% Similarity=0.302 Sum_probs=201.5
Q ss_pred eEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCCCCC
Q 001152 805 SSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 882 (1137)
Q Consensus 805 ~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~~~~ 882 (1137)
...+.||+|+||.||+|.+. +..||+|+..... ....+. +.+|+.+|++++|||||++++++.+.+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~~---- 159 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEE----VKNEISVMNQLDHANLIQLYDAFESKN---- 159 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHH----HHHHHHHHTTCCCTTBCCEEEEEECSS----
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHH----HHHHHHHHHhCCCCCCCeEEEEEEECC----
Confidence 44678999999999999984 5678888864321 223333 488999999999999999999998765
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEeccccc
Q 001152 883 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 962 (1137)
Q Consensus 883 ~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~~~ 962 (1137)
..++||||+++++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||+..+.
T Consensus 160 ----------~~~lv~E~~~~~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~- 224 (373)
T 2x4f_A 160 ----------DIVLVMEYVDGGELFDRIIDE----SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD- 224 (373)
T ss_dssp ----------EEEEEEECCTTCEEHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETT-
T ss_pred ----------EEEEEEeCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCC-
Confidence 679999999999999988751 24689999999999999999999999999999999999995331
Q ss_pred cCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001152 963 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1042 (1137)
Q Consensus 963 ~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG~ 1042 (1137)
.+.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|+|++|.
T Consensus 225 ----~~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~elltg~ 285 (373)
T 2x4f_A 225 ----AKQIKIIDFGLARRYKPREK-----------LKVNFGTPEFLAPEVVNY----DFVSFPTDMWSVGVIAYMLLSGL 285 (373)
T ss_dssp ----TTEEEECCCSSCEECCTTCB-----------CCCCCSSCTTCCHHHHTT----CBCCHHHHHHHHHHHHHHHHHSS
T ss_pred ----CCcEEEEeCCCceecCCccc-----------cccccCCCcEeChhhccC----CCCCcHHhHHHHHHHHHHHHhCC
Confidence 16899999999976543221 113469999999999865 56889999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001152 1043 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1122 (1137)
Q Consensus 1043 ~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL 1122 (1137)
.||.+.+..+....+........... ....++++.+|+.+||+.||.+|||++|++
T Consensus 286 ~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~~~li~~~L~~dp~~Rps~~e~l 341 (373)
T 2x4f_A 286 SPFLGDNDAETLNNILACRWDLEDEE------------------------FQDISEEAKEFISKLLIKEKSWRISASEAL 341 (373)
T ss_dssp CTTCCSSHHHHHHHHHHTCCCSCSGG------------------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHhccCCCChhh------------------------hccCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 99999888877777755432211110 013456799999999999999999999999
Q ss_pred HHHHhhc
Q 001152 1123 EMFVART 1129 (1137)
Q Consensus 1123 ~~L~~~~ 1129 (1137)
+|+|+..
T Consensus 342 ~hp~~~~ 348 (373)
T 2x4f_A 342 KHPWLSD 348 (373)
T ss_dssp HSHHHHC
T ss_pred cCcCcCC
Confidence 9999864
No 71
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3e-39 Score=371.14 Aligned_cols=256 Identities=24% Similarity=0.266 Sum_probs=204.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~~~ 878 (1137)
++|++.+.||+|+||.||+|.+. +..+|+|+...... .. .+|++++.++ +||||+++++++.+..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~----~~E~~~l~~~~~hp~iv~~~~~~~~~~ 89 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DP----TEEIEILLRYGQHPNIITLKDVYDDGK 89 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CC----HHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------Ch----HHHHHHHHHhcCCCCcCeEEEEEEcCC
Confidence 56999999999999999999985 56788988643321 11 4588888888 6999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..|+||||++||+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+.
T Consensus 90 --------------~~~lv~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~ 150 (342)
T 2qr7_A 90 --------------YVYVVTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150 (342)
T ss_dssp --------------EEEEEECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEES
T ss_pred --------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEe
Confidence 67999999999999999875 34699999999999999999999999999999999999986
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+. ...+.+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 151 ~~~---~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el 213 (342)
T 2qr7_A 151 DES---GNPESIRICDFGFAKQLRAENGL----------LMTPCYTANFVAPEVLER----QGYDAACDIWSLGVLLYTM 213 (342)
T ss_dssp SSS---CSGGGEEECCCTTCEECBCTTCC----------BCCSSCCSSCCCHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred cCC---CCcCeEEEEECCCcccCcCCCCc----------eeccCCCccccCHHHhcC----CCCCCccCeeeHhHHHHHH
Confidence 541 12246999999999765432111 123468999999999876 3477999999999999999
Q ss_pred HhCCCCCCC---CCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1039 LTLQVPYMG---LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1039 LTG~~Pf~~---~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
++|..||.+ ....++...+..+........+ ...++++.+|+.+||+.||.+|
T Consensus 214 l~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dP~~R 269 (342)
T 2qr7_A 214 LTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW------------------------NSVSDTAKDLVSKMLHVDPHQR 269 (342)
T ss_dssp HHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTT------------------------TTSCHHHHHHHHHHTCSSTTTS
T ss_pred hcCCCCCCCCCcCCHHHHHHHHccCCcccCcccc------------------------ccCCHHHHHHHHHHCCCChhHC
Confidence 999999975 3556666777655432211000 1345669999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001152 1116 PTAGDLYEMFVART 1129 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~ 1129 (1137)
||+.|+++|+|+..
T Consensus 270 ~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 270 LTAALVLRHPWIVH 283 (342)
T ss_dssp CCHHHHTTSHHHHT
T ss_pred cCHHHHhcCCeecC
Confidence 99999999999964
No 72
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3e-39 Score=367.86 Aligned_cols=291 Identities=21% Similarity=0.248 Sum_probs=206.2
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
...+++|++.++||+|+||+||+|.+. +..||+|+.... .......+. +.+|+.++++++||||+++++++.
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~ 103 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE--HEEEGVPGT----AIREVSLLKELQHRNIIELKSVIH 103 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCC--C------------CHHHHHHGGGCCCTTBCCEEEEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccc--ccccccchh----HHHHHHHHHHcCCCCcceEEEEEe
Confidence 345788999999999999999999874 567888875332 222222223 378999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+.. ..++||||++ ++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 104 ~~~--------------~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NI 163 (329)
T 3gbz_A 104 HNH--------------RLHLIFEYAE-NDLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163 (329)
T ss_dssp ETT--------------EEEEEEECCS-EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred cCC--------------EEEEEEecCC-CCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHE
Confidence 765 6799999997 699999976 24699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+. ....+.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++
T Consensus 164 ll~~~~--~~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il 228 (329)
T 3gbz_A 164 LLSVSD--ASETPVLKIGDFGLARAFGIPIR----------QFTHEIITLWYRPPEILLG---SRHYSTSVDIWSIACIW 228 (329)
T ss_dssp EEEC-------CCEEEECCTTHHHHHC---------------------CCTTCCHHHHTT---CCCCCTHHHHHHHHHHH
T ss_pred EEecCC--CCccceEEECcCCCccccCCccc----------ccCCCcCCccccCHHHhcC---CCCCCcHHHHHHHHHHH
Confidence 996542 12236799999999976543211 1123468999999999875 24578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCC----chhhhhhHHHHHHHHHHhcccC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK----PEAELETLSFLVDVFRRCTEEN 1111 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~L~dLl~~CL~~D 1111 (1137)
|+|++|..||.+....+....+...........+...... ....+....+.. .......++++.+|+.+||+.|
T Consensus 229 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 306 (329)
T 3gbz_A 229 AEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL--PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMD 306 (329)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS--TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSS
T ss_pred HHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh--hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCC
Confidence 9999999999988877766655322111101001100000 000000011110 1111235678999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCC
Q 001152 1112 PTERPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1112 P~~RPSa~EVL~~L~~~~~s 1131 (1137)
|.+|||++|+++|+|+....
T Consensus 307 P~~R~t~~e~l~hp~f~~~~ 326 (329)
T 3gbz_A 307 PVKRISAKNALEHPYFSHND 326 (329)
T ss_dssp GGGSCCHHHHHTSGGGSSSC
T ss_pred hhhCCCHHHHhCCcccCCCC
Confidence 99999999999999998653
No 73
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.9e-39 Score=385.25 Aligned_cols=284 Identities=17% Similarity=0.235 Sum_probs=206.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||+||+|.+. +..||+|+.... .......+ ++.+|+.+|+.++|||||++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~----~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 134 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP--FQNQTHAK----RAYRELVLMKCVNHKNIISLLNVFTPQK 134 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG--GGSHHHHH----HHHHHHHHHHHCCCTTBCCCSEEECSCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc--ccChHHHH----HHHHHHHHHHhCCCCCCCcEEEEEccCC
Confidence 478999999999999999999985 567888875422 22223333 3489999999999999999999997654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
.. ....+.|+||||++ ++|.+.+.. .+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 135 ~~--------~~~~~~~lv~E~~~-~~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~ 198 (464)
T 3ttj_A 135 TL--------EEFQDVYLVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198 (464)
T ss_dssp ST--------TTCCEEEEEEECCS-EEHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred cc--------ccCCeEEEEEeCCC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe
Confidence 21 11236899999997 567776642 489999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||+++...... .....+||+.|+|||++.+ ..|+.++|||||||++|||
T Consensus 199 ~~-------~~~kl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~el 256 (464)
T 3ttj_A 199 SD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGEM 256 (464)
T ss_dssp TT-------SCEEECCCCCC-----CC-----------CC----CCCTTCCHHHHTT----CCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEEEEeeeecCCCc-----------ccCCCcccccccCHHHHcC----CCCCHHHHHHHHHHHHHHH
Confidence 87 789999999997654321 1124579999999999986 4688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCC---C------------CCchhhhhhHHHHHHH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSG---F------------EKPEAELETLSFLVDV 1103 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~L~dL 1103 (1137)
++|+.||.+.+..+....+........+..+......... ....... . .........++++.+|
T Consensus 257 l~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 335 (464)
T 3ttj_A 257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN-YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335 (464)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH-HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh-HhhcccccCCCChHHhCcccccccccccccccCHHHHHH
Confidence 9999999998887777666433222222211111000000 0000000 0 0011122336789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1104 FRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1104 l~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
+.+||+.||.+|||++|+++|+|+..
T Consensus 336 l~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 336 LSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp HHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred HHHHcCCChhhCCCHHHHhcChhhhh
Confidence 99999999999999999999999973
No 74
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.1e-39 Score=364.23 Aligned_cols=265 Identities=22% Similarity=0.269 Sum_probs=212.2
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
++|++.+.||+|+||.||+|++. +..+|+|+............ .....+.+|+.++++++||||+++++++.+..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 88 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG--VSREEIEREVSILRQVLHHNVITLHDVYENRT- 88 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSS--BCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccc--hhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-
Confidence 45999999999999999999985 57799998654432221110 01123478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 89 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~ 150 (321)
T 2a2a_A 89 -------------DVVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150 (321)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred -------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEec
Confidence 67999999999999999975 346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
++ .....+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 151 ~~---~~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 212 (321)
T 2a2a_A 151 KN---IPIPHIKLIDFGLAHEIEDGVE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYILL 212 (321)
T ss_dssp TT---SSSCCEEECCCTTCEECCTTCC-----------CCCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CC---CCcCCEEEccCccceecCcccc-----------ccccCCCCCccCcccccC----CCCCCccccHHHHHHHHHHH
Confidence 62 1112799999999876543211 123469999999999875 56789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+....+....+......... .. ....++.+.+++.+||+.||.+|||++
T Consensus 213 ~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~-----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ 268 (321)
T 2a2a_A 213 SGASPFLGDTKQETLANITSVSYDFDE-EF-----------------------FSHTSELAKDFIRKLLVKETRKRLTIQ 268 (321)
T ss_dssp HSCCSSCCSSHHHHHHHHHTTCCCCCH-HH-----------------------HTTCCHHHHHHHHTTSCSSTTTSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHhcccccCh-hh-----------------------hcccCHHHHHHHHHHcCCChhhCcCHH
Confidence 999999988888777777654432211 11 113456699999999999999999999
Q ss_pred HHHHHHHhhc
Q 001152 1120 DLYEMFVART 1129 (1137)
Q Consensus 1120 EVL~~L~~~~ 1129 (1137)
|+++|+|+..
T Consensus 269 e~l~hp~~~~ 278 (321)
T 2a2a_A 269 EALRHPWITP 278 (321)
T ss_dssp HHHHSTTTSC
T ss_pred HHhcCccccC
Confidence 9999999864
No 75
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=7.5e-39 Score=386.24 Aligned_cols=269 Identities=22% Similarity=0.292 Sum_probs=213.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCC-----hHHHHHhHHhHHHHHHHHHhCCCCCcceeeee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSS-----ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 873 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~-----~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~ 873 (1137)
..+|++.++||+|+||+||+|.+. +..+|+|+......... ....+.....+.+|+.+|++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 367999999999999999999985 46789998654322110 11112233456899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCC
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 953 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~ 953 (1137)
+.+.. ..++||||+++|+|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+
T Consensus 115 ~~~~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~ 175 (504)
T 3q5i_A 115 FEDKK--------------YFYLVTEFYEGGELFEQIIN-----RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPE 175 (504)
T ss_dssp EECSS--------------EEEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred EEcCC--------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHH
Confidence 98765 67999999999999999876 246999999999999999999999999999999999
Q ss_pred CeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001152 954 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1033 (1137)
Q Consensus 954 NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1033 (1137)
|||++.++ ....+||+|||++........ .....||+.|+|||++.+ .++.++|||||||
T Consensus 176 Nil~~~~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~ 235 (504)
T 3q5i_A 176 NILLENKN----SLLNIKIVDFGLSSFFSKDYK-----------LRDRLGTAYYIAPEVLKK-----KYNEKCDVWSCGV 235 (504)
T ss_dssp GEEESSTT----CCSSEEECCCTTCEECCTTSC-----------BCCCCSCTTTCCHHHHTT-----CBCTHHHHHHHHH
T ss_pred HEEEecCC----CCccEEEEECCCCEEcCCCCc-----------cccccCCcCCCCHHHhcc-----CCCchHHHHHHHH
Confidence 99998662 123699999999976543211 113469999999999863 5789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1034 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1034 iL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
++|+|++|..||.+....++...+..+........+. ..++++.+|+.+||+.||.
T Consensus 236 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~------------------------~~s~~~~~li~~~L~~dp~ 291 (504)
T 3q5i_A 236 IMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWK------------------------NISDEAKELIKLMLTYDYN 291 (504)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHT------------------------TSCHHHHHHHHHHTCSSTT
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccC------------------------CCCHHHHHHHHHHcCCChh
Confidence 9999999999999999888888887765432221111 3456699999999999999
Q ss_pred CCCCHHHHHHHHHhhcCCC
Q 001152 1114 ERPTAGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~~~ss 1132 (1137)
+|||++|+++|+|++....
T Consensus 292 ~R~t~~e~l~h~~~~~~~~ 310 (504)
T 3q5i_A 292 KRCTAEEALNSRWIKKYAN 310 (504)
T ss_dssp TSCCHHHHHTSHHHHHTCC
T ss_pred HCCCHHHHhcCHhhhhchh
Confidence 9999999999999986543
No 76
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.8e-39 Score=364.69 Aligned_cols=267 Identities=23% Similarity=0.259 Sum_probs=204.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
.++|++.+.||+|+||.||+|++. +..||+|+...... ...... .++.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~----~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 85 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFY----LRFRREAQNAAALNHPAIVAVYDTGEAET 85 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHH----HHHHHHHTTCCCCCCTTBCCEEEEEEEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHH----HHHHHHHHHHHcCCCCCcceEEEeeeccC
Confidence 467999999999999999999974 57788888643322 112222 34588999999999999999999987643
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
. .....|+||||+++++|.++++. ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 86 ~----------~~~~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~ 150 (311)
T 3ork_A 86 P----------AGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150 (311)
T ss_dssp T----------TEEEEEEEEECCCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred C----------CCcccEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc
Confidence 1 11245999999999999999976 23699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++.......... .......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 151 ~~-------~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 212 (311)
T 3ork_A 151 AT-------NAVKVMDFGIARAIADSGNSV-------TQTAAVIGTAQYLSPEQARG----DSVDARSDVYSLGCVLYEV 212 (311)
T ss_dssp TT-------SCEEECCCSCC-------------------------CCTTCCHHHHHT----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeccCccccccccccc-------ccccccCcCcccCCHHHhcC----CCCCchHhHHHHHHHHHHH
Confidence 87 789999999997654322110 11123468999999999976 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|+.||.+....+....+.......... . ....++++.+++.+||+.||.+||++
T Consensus 213 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~-----------------------~~~~~~~l~~li~~~l~~dP~~R~~~ 268 (311)
T 3ork_A 213 LTGEPPFTGDSPVSVAYQHVREDPIPPSA-R-----------------------HEGLSADLDAVVLKALAKNPENRYQT 268 (311)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHCCCCCHHH-H-----------------------STTCCHHHHHHHHHHTCSSGGGSCSS
T ss_pred HhCCCCCCCCChHHHHHHHhcCCCCCccc-c-----------------------cCCCCHHHHHHHHHHHhcCHhhChhh
Confidence 99999999888777666554433221110 0 01345679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001152 1119 GDLYEMFVART 1129 (1137)
Q Consensus 1119 ~EVL~~L~~~~ 1129 (1137)
.+++.+.|+..
T Consensus 269 ~~~l~~~l~~~ 279 (311)
T 3ork_A 269 AAEMRADLVRV 279 (311)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998863
No 77
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-39 Score=371.44 Aligned_cols=290 Identities=22% Similarity=0.232 Sum_probs=206.9
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+|++.+.||+|+||.||+|++. +..||+|+........ ..+.....+.+|+.+++.++||||+++++++.+.
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSE---AKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcch---hhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence 3578999999999999999999985 5678888754322111 1112223457899999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
. ..++||||++ ++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 85 ~--------------~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~ 145 (346)
T 1ua2_A 85 S--------------NISLVFDFME-TDLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL 145 (346)
T ss_dssp T--------------CCEEEEECCS-EEHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred C--------------ceEEEEEcCC-CCHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE
Confidence 5 4599999998 589888864 23468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 146 ~~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~e 205 (346)
T 1ua2_A 146 DEN-------GVLKLADFGLAKSFGSPNR----------AYTHQVVTRWYRAPELLFG---ARMYGVGVDMWAVGCILAE 205 (346)
T ss_dssp CTT-------CCEEECCCGGGSTTTSCCC----------CCCCSCCCCTTCCHHHHTT---CSCCCHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEEecccceeccCCcc----------cCCcccccccccCchHhhC---CCCCCchhhhHhHHHHHHH
Confidence 887 7899999999876543211 1123468999999999864 2457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
|++|..||.+....+....+...........+...........................++++.+|+.+||+.||.+|||
T Consensus 206 ll~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 285 (346)
T 1ua2_A 206 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT 285 (346)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence 99999999988877776666332111111111100000000000000000001111245678999999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001152 1118 AGDLYEMFVARTSS 1131 (1137)
Q Consensus 1118 a~EVL~~L~~~~~s 1131 (1137)
++|+++|+|+....
T Consensus 286 ~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 286 ATQALKMKYFSNRP 299 (346)
T ss_dssp HHHHHTSGGGTSSS
T ss_pred HHHHhcChhhhcCC
Confidence 99999999998643
No 78
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=373.25 Aligned_cols=268 Identities=21% Similarity=0.339 Sum_probs=213.7
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCccee
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 870 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkl 870 (1137)
.....+|++.+.||+|+||+||+|++. +..||||+.. .. ........ +.+|+.++++++|||||++
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~E~~~l~~l~hpnIv~~ 139 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP--EV-CSEQDELD----FLMEALIISKFNHQNIVRC 139 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECC--SS-CCHHHHHH----HHHHHHHHHHCCCTTBCCE
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecc--cc-cChhhHHH----HHHHHHHHHhCCCCCCCeE
Confidence 344578999999999999999999963 2457888642 22 12333333 4889999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Q 001152 871 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 948 (1137)
Q Consensus 871 lg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~--~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHr 948 (1137)
++++.+.. ..++||||+++|+|.++++..... ....+++..++.|+.||+.||+|||++||+||
T Consensus 140 ~~~~~~~~--------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 205 (367)
T 3l9p_A 140 IGVSLQSL--------------PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR 205 (367)
T ss_dssp EEEECSSS--------------SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred EEEEecCC--------------CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 99998765 459999999999999999874321 12469999999999999999999999999999
Q ss_pred cCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhH
Q 001152 949 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1028 (1137)
Q Consensus 949 DLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1028 (1137)
||||+|||++.++ ....+||+|||+++........ .......||+.|+|||++.+ ..++.++||
T Consensus 206 Dlkp~NIll~~~~----~~~~~kL~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Dv 269 (367)
T 3l9p_A 206 DIAARNCLLTCPG----PGRVAKIGDFGMARDIYRAGYY--------RKGGCAMLPVKWMPPEAFME----GIFTSKTDT 269 (367)
T ss_dssp CCCGGGEEESCSS----TTCCEEECCCHHHHHHHHHSSC--------TTCCGGGSCGGGCCHHHHHH----CCCCHHHHH
T ss_pred CCChhhEEEecCC----CCceEEECCCcccccccccccc--------ccCCCcCCcccEECHHHhcC----CCCCcHHHH
Confidence 9999999998552 1146999999999755332111 11123468899999999976 568899999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001152 1029 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1107 (1137)
Q Consensus 1029 WSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~C 1107 (1137)
|||||++|||++ |..||.+....++...+..+..+..+. .+++.+.+|+.+|
T Consensus 270 wslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~ 322 (367)
T 3l9p_A 270 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK---------------------------NCPGPVYRIMTQC 322 (367)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHH
Confidence 999999999998 999999988888888887665433221 3345599999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhc
Q 001152 1108 TEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1108 L~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
|+.||.+|||+.+|+++++...
T Consensus 323 l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 323 WQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCHhHCcCHHHHHHHHHHHh
Confidence 9999999999999999999864
No 79
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.9e-39 Score=375.24 Aligned_cols=294 Identities=19% Similarity=0.237 Sum_probs=202.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeeEecC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS 877 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpNIVkllg~~~~~ 877 (1137)
+.+|++.+.||+|+||.||+|.+. +..||+|+.. .........+. +.+|+.+++.+. |||||++++++...
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~--~~~~~~~~~~~----~~~E~~~l~~l~~h~niv~l~~~~~~~ 81 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF--DAFQNSTDAQR----TFREIMILTELSGHENIVNLLNVLRAD 81 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEEC--C--CCHHHHHH----HHHHHHHHHHTTTCTTBCCEEEEEECT
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEec--ccccChHHHHH----HHHHHHHHHhccCCCCCCeeeeEEecC
Confidence 568999999999999999999985 5678888643 22222333333 378999999998 99999999999754
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+. ...|+||||++ ++|..+++. ..+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 82 ~~------------~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll 142 (388)
T 3oz6_A 82 ND------------RDVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL 142 (388)
T ss_dssp TS------------SCEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred CC------------CEEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE
Confidence 31 15799999997 799999876 368999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCcccccccccccccc-----------ccCCCCCCCcccCCCcccchhhhccccCCCCCCchh
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI-----------AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1026 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~-----------~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1026 (1137)
+.+ +.+||+|||+++........... ...........+||+.|+|||++.+ ...++.++
T Consensus 143 ~~~-------~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~ 212 (388)
T 3oz6_A 143 NAE-------CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG---STKYTKGI 212 (388)
T ss_dssp CTT-------CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT---CCCCCTHH
T ss_pred cCC-------CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC---CCCCCChh
Confidence 987 78999999999765431110000 0000111234579999999999875 25688999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccc----c------ccCCCCCCch-----
Q 001152 1027 DIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEV----A------QSGSGFEKPE----- 1091 (1137)
Q Consensus 1027 DVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~----~------~~~~~~~~~~----- 1091 (1137)
|||||||++|||++|+.||.+.+..+....+...........+........... . ........+.
T Consensus 213 DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (388)
T 3oz6_A 213 DMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLL 292 (388)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhc
Confidence 999999999999999999999888777766643221111111111000000000 0 0000000000
Q ss_pred ----hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1092 ----AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1092 ----~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
....+++++.+|+.+||+.||.+|||++|+++|+|+..
T Consensus 293 ~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~ 334 (388)
T 3oz6_A 293 LKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI 334 (388)
T ss_dssp HHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred ccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence 00144667999999999999999999999999999863
No 80
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.1e-39 Score=374.59 Aligned_cols=259 Identities=23% Similarity=0.290 Sum_probs=204.9
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HHhCCCCCcceeeeeE
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHK 874 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~i-L~~L~HpNIVkllg~~ 874 (1137)
.....+|++.+.||+|+||.||+|++.. ..+|+|+........ ....+. +.+|..+ ++.++|||||++++++
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~----~~~e~~~ll~~~~hp~Iv~l~~~~ 108 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-KKEEKH----IMSERNVLLKNVKHPFLVGLHFSF 108 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC------------------CCBCCCCCTTBCCEEEEE
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-hHHHHH----HHHHHHHHHHhCCCCCCCCEEEEE
Confidence 3456789999999999999999999854 568888865443221 112222 3567666 5678999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+.+ ..|+||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 109 ~~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N 169 (373)
T 2r5t_A 109 QTAD--------------KLYFVLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPEN 169 (373)
T ss_dssp ECSS--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred EeCC--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH
Confidence 8765 67999999999999999976 2468999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||+
T Consensus 170 Ill~~~-------g~ikL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 228 (373)
T 2r5t_A 170 ILLDSQ-------GHIVLTDFGLCKENIEHN----------STTSTFCGTPEYLAPEVLHK----QPYDRTVDWWCLGAV 228 (373)
T ss_dssp EEECTT-------SCEEECCCCBCGGGBCCC----------CCCCSBSCCCCCCCHHHHTT----CCCCTHHHHHHHHHH
T ss_pred EEECCC-------CCEEEeeCccccccccCC----------CccccccCCccccCHHHhCC----CCCCchhhhHHHHHH
Confidence 999987 789999999987533211 11224579999999999875 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|||++|..||.+.+..++...+...... ++. ..++++.+|+.+||+.||.+
T Consensus 229 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~~~---------------------------~~~~~~~~li~~lL~~dp~~ 280 (373)
T 2r5t_A 229 LYEMLYGLPPFYSRNTAEMYDNILNKPLQ-LKP---------------------------NITNSARHLLEGLLQKDRTK 280 (373)
T ss_dssp HHHHHHSSCTTCCSBHHHHHHHHHHSCCC-CCS---------------------------SSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhcccC-CCC---------------------------CCCHHHHHHHHHHcccCHHh
Confidence 99999999999998888888777654321 110 23456899999999999999
Q ss_pred CCCH----HHHHHHHHhhc
Q 001152 1115 RPTA----GDLYEMFVART 1129 (1137)
Q Consensus 1115 RPSa----~EVL~~L~~~~ 1129 (1137)
||++ .++++|+|+..
T Consensus 281 R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 281 RLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp STTTTTTHHHHHTSGGGTT
T ss_pred CCCCCCCHHHHhCCccccC
Confidence 9986 79999999864
No 81
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.7e-39 Score=385.45 Aligned_cols=260 Identities=23% Similarity=0.284 Sum_probs=213.4
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
...+.+|.+.+.||+|+||.||+|++. +..||+|+...... ........+.+|+.+++.++||||+++++++.
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-----~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~ 86 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-----RSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS 86 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-----HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-----cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 345688999999999999999999985 67899998643211 11112234588999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
... ..++||||+++|+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||
T Consensus 87 ~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NI 147 (476)
T 2y94_A 87 TPS--------------DIFMVMEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV 147 (476)
T ss_dssp CSS--------------EEEEEEECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGE
T ss_pred ECC--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHE
Confidence 765 67999999999999999864 34699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||++........ .....||+.|+|||++.+. ..++.++|||||||++
T Consensus 148 ll~~~-------~~vkL~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwSlGvil 206 (476)
T 2y94_A 148 LLDAH-------MNAKIADFGLSNMMSDGEF-----------LRTSCGSPNYAAPEVISGR---LYAGPEVDIWSSGVIL 206 (476)
T ss_dssp EECTT-------CCEEECCCSSCEECCTTCC-----------BCCCCSCSTTCCHHHHTTC---CBCSHHHHHHHHHHHH
T ss_pred EEecC-------CCeEEEeccchhhcccccc-----------ccccCCCcCeEChhhccCC---CCCCCcceehhhHHHH
Confidence 99987 7899999999976543211 1134699999999999752 2347899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|+|++|..||.+.....+...+..+.... +. ..++++.+|+.+||+.||.+|
T Consensus 207 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~-p~---------------------------~~s~~~~~Li~~~L~~dP~~R 258 (476)
T 2y94_A 207 YALLCGTLPFDDDHVPTLFKKICDGIFYT-PQ---------------------------YLNPSVISLLKHMLQVDPMKR 258 (476)
T ss_dssp HHHHHSSCSSCCSSSHHHHHHHHTTCCCC-CT---------------------------TCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHhhCCCCCCCCCHHHHHHHHhcCCcCC-Cc---------------------------cCCHHHHHHHHHHcCCCchhC
Confidence 99999999999887777777776554211 10 234568999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001152 1116 PTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~ 1130 (1137)
||++||++|+|+...
T Consensus 259 pt~~eil~hp~~~~~ 273 (476)
T 2y94_A 259 ATIKDIREHEWFKQD 273 (476)
T ss_dssp CCHHHHHTCHHHHTT
T ss_pred cCHHHHHhCHHhhhc
Confidence 999999999999754
No 82
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5e-39 Score=352.58 Aligned_cols=261 Identities=22% Similarity=0.355 Sum_probs=209.8
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+.+|++.+.||+|+||+||+|++.+..+|+|++... .......+. +.+|+.++++++||||+++++++.+.
T Consensus 6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~ 79 (271)
T 3kmu_A 6 GIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVR--DWSTRKSRD----FNEECPRLRIFSHPNVLPVLGACQSP 79 (271)
T ss_dssp CCCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCT--TCCHHHHHH----HHHHGGGGCCCSCTTEECEEEEECTT
T ss_pred CCCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEeccc--ccCHHHHHH----HHHHHHHHHhcCCCchhheEEEEccC
Confidence 345788999999999999999999999999999986543 222333333 48899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENI 955 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~g--IIHrDLKP~NI 955 (1137)
.. ...++||||+++|+|.+++.. .....+++..++.|+.||+.||+|||++| |+||||||+||
T Consensus 80 ~~------------~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Ni 144 (271)
T 3kmu_A 80 PA------------PHPTLITHWMPYGSLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSV 144 (271)
T ss_dssp TS------------SSCEEEEECCTTCBHHHHHHS---CSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGE
T ss_pred CC------------CCeEeeecccCCCcHHHHHhh---cccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceE
Confidence 21 156999999999999999975 22336999999999999999999999999 99999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.++|+|||++..... ....||+.|+|||++.+.. ...++.++|||||||++
T Consensus 145 l~~~~-------~~~~l~~~~~~~~~~~---------------~~~~~t~~y~aPE~~~~~~-~~~~~~~~Di~slG~il 201 (271)
T 3kmu_A 145 MIDED-------MTARISMADVKFSFQS---------------PGRMYAPAWVAPEALQKKP-EDTNRRSADMWSFAVLL 201 (271)
T ss_dssp EECTT-------SCEEEEGGGSCCTTSC---------------TTCBSCGGGSCHHHHHSCG-GGSCHHHHHHHHHHHHH
T ss_pred EEcCC-------cceeEEeccceeeecc---------------cCccCCccccChhhhccCC-CCCCCchhhHHHHHHHH
Confidence 99977 7799998887653221 1235899999999987521 12344589999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHc-CCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~-g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|+|++|+.||.+....+....+.. +..+.++. ..++++.+++.+||+.||.+
T Consensus 202 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~ 254 (271)
T 3kmu_A 202 WELVTREVPFADLSNMEIGMKVALEGLRPTIPP---------------------------GISPHVSKLMKICMNEDPAK 254 (271)
T ss_dssp HHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhCCCCccccChHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhh
Confidence 999999999998887776655533 32322221 34456999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001152 1115 RPTAGDLYEMFVART 1129 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~ 1129 (1137)
|||++|+++.+....
T Consensus 255 Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 255 RPKFDMIVPILEKMQ 269 (271)
T ss_dssp SCCHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHhh
Confidence 999999999987654
No 83
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7.3e-39 Score=356.73 Aligned_cols=258 Identities=24% Similarity=0.342 Sum_probs=200.9
Q ss_pred CCceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~~~--~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..|++.+.||+|+||+||+|.+..+ .+|+|+.. .........+. +.+|+.++++++||||+++++++.....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~--~~~~~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 99 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQ--DRKLTKSERQR----FKEEAEMLKGLQHPNIVRFYDSWESTVK 99 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEE--GGGSCHHHHHH----HHHHHHHHTTCCCTTBCCEEEEEEEESS
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEec--chhhCHHHHHH----HHHHHHHHHhCCCCCeeeeeeeeccccC
Confidence 3479999999999999999998654 46666543 32223333333 4889999999999999999999875320
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeEe
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENILI 957 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~g--IIHrDLKP~NILl 957 (1137)
.....++||||+++++|.+++... ..+++..++.|+.||+.||+|||++| |+||||||+|||+
T Consensus 100 ----------~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~ 164 (290)
T 1t4h_A 100 ----------GKKCIVLVTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 164 (290)
T ss_dssp ----------SCEEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEE
T ss_pred ----------CCceEEEEEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEE
Confidence 122679999999999999999762 46899999999999999999999999 9999999999999
Q ss_pred c-cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 958 D-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 958 d-~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
+ .+ +.+||+|||++........ ....||+.|+|||++.+ .++.++|||||||++|
T Consensus 165 ~~~~-------~~~kl~Dfg~~~~~~~~~~------------~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~~l~ 220 (290)
T 1t4h_A 165 TGPT-------GSVKIGDLGLATLKRASFA------------KAVIGTPEFMAPEMYEE-----KYDESVDVYAFGMCML 220 (290)
T ss_dssp SSTT-------SCEEECCTTGGGGCCTTSB------------EESCSSCCCCCGGGGGT-----CCCTHHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeeCCCccccccccc------------ccccCCcCcCCHHHHhc-----cCCCcchHHHHHHHHH
Confidence 7 44 6899999999864433211 13468999999998863 4789999999999999
Q ss_pred HHHhCCCCCCCCC-HHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1037 ELLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~-~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
+|++|..||.... .......+..+..+.. .....++++.+++.+||+.||.+|
T Consensus 221 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~R 274 (290)
T 1t4h_A 221 EMATSEYPYSECQNAAQIYRRVTSGVKPAS--------------------------FDKVAIPEVKEIIEGCIRQNKDER 274 (290)
T ss_dssp HHHHSSCTTTTCSSHHHHHHHHTTTCCCGG--------------------------GGGCCCHHHHHHHHHHSCSSGGGS
T ss_pred HHHhCCCCCCCcCcHHHHHHHHhccCCccc--------------------------cCCCCCHHHHHHHHHHccCChhhC
Confidence 9999999998743 3444444433322110 011234569999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001152 1116 PTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~ 1130 (1137)
||++|+++|+|+...
T Consensus 275 ps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 275 YSIKDLLNHAFFQEE 289 (290)
T ss_dssp CCHHHHHTSGGGC--
T ss_pred CCHHHHhhCcccccC
Confidence 999999999999753
No 84
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=361.16 Aligned_cols=294 Identities=20% Similarity=0.225 Sum_probs=210.4
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||+||+|++. +..||+|+........ ..+ .+.+|+.++++++||||+++++++.....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 81 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVD----VQMREFEVLKKLNHKNIVKLFAIEEETTT 81 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---CHH----HHHHHHHHHHHCCCTTBCCEEEEEECTTT
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccc---hHH----HHHHHHHHHHhcCCCCcceEEEEeecCCC
Confidence 46999999999999999999986 5779999864322111 122 23789999999999999999999876441
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
...++||||+++++|.+++.... ....+++..++.|+.||+.||+|||++||+||||||+|||+..
T Consensus 82 ------------~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~ 147 (319)
T 4euu_A 82 ------------RHKVLIMEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147 (319)
T ss_dssp ------------CCEEEEEECCTTCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred ------------ceEEEEEeCCCCCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEec
Confidence 15699999999999999998632 2234999999999999999999999999999999999999822
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc----CCCCCCchhhHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH----KPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~~~~~s~ksDVWSLGviL 1035 (1137)
. ....+.+||+|||+++........ ....||+.|+|||++.... ....++.++|||||||++
T Consensus 148 ~---~~~~~~~kL~Dfg~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il 213 (319)
T 4euu_A 148 G---EDGQSVYKLTDFGAARELEDDEQF-----------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213 (319)
T ss_dssp C---TTSCEEEEECCCTTCEECCTTCCB-----------CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHH
T ss_pred c---CCCCceEEEccCCCceecCCCCce-----------eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHH
Confidence 2 112267999999999765432211 1346999999999986310 125688999999999999
Q ss_pred HHHHhCCCCCCCCC----HHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001152 1036 LELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1111 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~----~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~D 1111 (1137)
|||++|..||.... ..++...+..+..+............ ......... .........++.+.+++.+||+.|
T Consensus 214 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~l~~ll~~~L~~d 290 (319)
T 4euu_A 214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG--PIDWSGDMP-VSCSLSRGLQVLLTPVLANILEAD 290 (319)
T ss_dssp HHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTC--CEEEESSCC-TTCSSCHHHHHHHHHHHHHHSCCC
T ss_pred HHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCC--ccccCccCC-cccccchhHHHHhHHHHHHhccCC
Confidence 99999999996422 23444445443332211111110000 000000000 011122467788999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCCCC
Q 001152 1112 PTERPTAGDLYEMFVARTSSSI 1133 (1137)
Q Consensus 1112 P~~RPSa~EVL~~L~~~~~ss~ 1133 (1137)
|++|||++|+++|+........
T Consensus 291 P~~R~s~~ell~h~~d~~~~~~ 312 (319)
T 4euu_A 291 QEKCWGFDQFFAETSDILHRGN 312 (319)
T ss_dssp TTTSCCHHHHHHHHHHHTC---
T ss_pred hhhhccHHHhhhccHHHhhcCC
Confidence 9999999999999998765443
No 85
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.1e-39 Score=384.99 Aligned_cols=258 Identities=24% Similarity=0.325 Sum_probs=205.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
....+|++.+.||+|+||.||+|++. +..||+|+........ ..... .+.+|+.+++.++||||+++++++.+
T Consensus 145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~----~~~~e~~~l~~l~h~~iv~l~~~~~~ 219 (446)
T 4ejn_A 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDEVA----HTLTENRVLQNSRHPFLTALKYSFQT 219 (446)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC------------------CCCCCSCTTSCCEEEEEEE
T ss_pred CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh-hHHHH----HHHHHHHHHHhCCCCeEeeEEEEEee
Confidence 34678999999999999999999984 5679999865332111 12222 23789999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCe
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI 955 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs-~gIIHrDLKP~NI 955 (1137)
.+ ..++||||+++|+|.+++.. ...+++..+..|+.||+.||+|||+ +||+||||||+||
T Consensus 220 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NI 280 (446)
T 4ejn_A 220 HD--------------RLCFVMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 280 (446)
T ss_dssp TT--------------EEEEEECCCSSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGE
T ss_pred CC--------------EEEEEEeeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHE
Confidence 66 67999999999999999976 2469999999999999999999998 9999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 281 ll~~~-------~~~kl~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 339 (446)
T 4ejn_A 281 MLDKD-------GHIKITDFGLCKEGIKDGA----------TMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVM 339 (446)
T ss_dssp EECSS-------SCEEECCCCCCCTTCC---------------CCSSSCGGGCCHHHHHT----SCCCTHHHHHHHHHHH
T ss_pred EECCC-------CCEEEccCCCceeccCCCc----------ccccccCCccccCHhhcCC----CCCCCccchhhhHHHH
Confidence 99987 7899999999875332211 1124579999999999875 5689999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|||++|..||.+.+..++...+...... ++. ..++++.+||.+||+.||.+|
T Consensus 340 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~~~~~~~li~~~L~~dP~~R 391 (446)
T 4ejn_A 340 YEMMCGRLPFYNQDHEKLFELILMEEIR-FPR---------------------------TLGPEAKSLLSGLLKKDPKQR 391 (446)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCc---------------------------cCCHHHHHHHHHHcccCHHHh
Confidence 9999999999988888877777554321 111 234569999999999999999
Q ss_pred C-----CHHHHHHHHHhhc
Q 001152 1116 P-----TAGDLYEMFVART 1129 (1137)
Q Consensus 1116 P-----Sa~EVL~~L~~~~ 1129 (1137)
| +++|+++|+|+..
T Consensus 392 ~~~~~~t~~ell~hp~f~~ 410 (446)
T 4ejn_A 392 LGGGSEDAKEIMQHRFFAG 410 (446)
T ss_dssp TTCSTTTHHHHHTSGGGTT
T ss_pred CCCCCCCHHHHHhCccccC
Confidence 9 9999999999974
No 86
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.1e-39 Score=366.77 Aligned_cols=259 Identities=23% Similarity=0.273 Sum_probs=187.7
Q ss_pred CceEe---eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeeEec
Q 001152 803 SLSSC---DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKIS 876 (1137)
Q Consensus 803 ~y~l~---~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpNIVkllg~~~~ 876 (1137)
+|++. +.||+|+||+||+|.+. +..+|+|+.... ... .+.+|+.+++.+. ||||+++++++.+
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~----~~~~e~~~l~~l~~h~niv~~~~~~~~ 77 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEA----NTQKEITALKLCEGHPNIVKLHEVFHD 77 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHH----HHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhh----hHHHHHHHHHHhcCCCCeeEEEEEEEc
Confidence 45554 78999999999999985 567888885322 112 2367999999997 9999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.. ..++||||+++++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 78 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl 138 (325)
T 3kn6_A 78 QL--------------HTFLVMELLNGGELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLL 138 (325)
T ss_dssp SS--------------EEEEEECCCCSCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred CC--------------EEEEEEEccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEE
Confidence 65 67999999999999999976 356999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.++ ....+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 139 l~~~~----~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwslG~il~ 200 (325)
T 3kn6_A 139 FTDEN----DNLEIKIIDFGFARLKPPDNQ----------PLKTPCFTLHYAAPELLNQ----NGYDESCDLWSLGVILY 200 (325)
T ss_dssp EEC--------CEEEECCCTTCEECCC------------------------------------CCCCHHHHHHHHHHHHH
T ss_pred EecCC----CcccEEEeccccceecCCCCC----------cccccCCCcCccCHHHhcC----CCCCCccchHHHHHHHH
Confidence 98652 114799999999975443211 1123468999999999875 56889999999999999
Q ss_pred HHHhCCCCCCCCCH-------HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001152 1037 ELLTLQVPYMGLSE-------LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1109 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~-------~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~ 1109 (1137)
+|++|..||.+... .++...+..+..+..... ....++++.+|+.+||+
T Consensus 201 ~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~ 256 (325)
T 3kn6_A 201 TMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEA------------------------WKNVSQEAKDLIQGLLT 256 (325)
T ss_dssp HHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHH------------------------HHTSCHHHHHHHHHHHC
T ss_pred HHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccc------------------------ccCCCHHHHHHHHHHCC
Confidence 99999999976432 344444444332211111 11456679999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcCCCC
Q 001152 1110 ENPTERPTAGDLYEMFVARTSSSI 1133 (1137)
Q Consensus 1110 ~DP~~RPSa~EVL~~L~~~~~ss~ 1133 (1137)
.||.+|||++|+++|+|+......
T Consensus 257 ~dP~~Rpt~~ell~h~w~~~~~~~ 280 (325)
T 3kn6_A 257 VDPNKRLKMSGLRYNEWLQDGSQL 280 (325)
T ss_dssp CCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred CChhHCCCHHHHhcChhhccCccC
Confidence 999999999999999999865443
No 87
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.8e-39 Score=352.55 Aligned_cols=256 Identities=23% Similarity=0.308 Sum_probs=209.3
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..+|++.+.||+|+||.||+|++.+ ..+|+|+..... ... +. +.+|+.++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~---~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~- 76 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MSE---DE----FFQEAQTMMKLSHPKLVKFYGVCSKEY- 76 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BCH---HH----HHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--CcH---HH----HHHHHHHHHhCCCCCEeeEEEEEccCC-
Confidence 4679999999999999999999865 478998864322 111 22 378999999999999999999997655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+||+++.
T Consensus 77 -------------~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~ 139 (268)
T 3sxs_A 77 -------------PIYIVTEYISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDR 139 (268)
T ss_dssp -------------SEEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECT
T ss_pred -------------ceEEEEEccCCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECC
Confidence 569999999999999999762 235999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++.......... .....+|+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 140 ~-------~~~~l~Dfg~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 199 (268)
T 3sxs_A 140 D-------LCVKVSDFGMTRYVLDDQYVS---------SVGTKFPVKWSAPEVFHY----FKYSSKSDVWAFGILMWEVF 199 (268)
T ss_dssp T-------CCEEECCTTCEEECCTTCEEE---------CCSCCCCGGGCCHHHHHH----SEEETTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEccCccceecchhhhhc---------ccCCCcCcccCCHHHHhc----cCCchhhhhHHHHHHHHHHH
Confidence 7 789999999987654332111 112346778999999876 45789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 T-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+ |..||......+....+..+.....+. ..++.+.+++.+||+.||.+|||+
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps~ 252 (268)
T 3sxs_A 200 SLGKMPYDLYTNSEVVLKVSQGHRLYRPH---------------------------LASDTIYQIMYSCWHELPEKRPTF 252 (268)
T ss_dssp TTTCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHTTCSSGGGSCCH
T ss_pred cCCCCCccccChHHHHHHHHcCCCCCCCC---------------------------cChHHHHHHHHHHcCCChhhCcCH
Confidence 9 999999888887777776554332221 233458999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
.|+++++.....
T Consensus 253 ~~ll~~L~~l~~ 264 (268)
T 3sxs_A 253 QQLLSSIEPLRE 264 (268)
T ss_dssp HHHHHHHGGGCC
T ss_pred HHHHHHHHHhhh
Confidence 999999987643
No 88
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6.8e-39 Score=385.66 Aligned_cols=259 Identities=24% Similarity=0.333 Sum_probs=207.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.++||+|+||+||+|++. +..+|+|+....... ....+ .+.+|+.+++.++|||||++++++.+..
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~- 109 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNS----KLLEEVAVLKLLDHPNIMKLYDFFEDKR- 109 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTH----HHHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHH----HHHHHHHHHHhCCCCCCCeEEEEEEeCC-
Confidence 36999999999999999999985 467888886433211 11122 3478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++|+|.+++... ..+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 110 -------------~~~lv~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 171 (494)
T 3lij_A 110 -------------NYYLVMECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLES 171 (494)
T ss_dssp -------------EEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred -------------EEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeC
Confidence 679999999999999988762 46999999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
.. ..+.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus 172 ~~----~~~~~kl~DfG~a~~~~~~~~-----------~~~~~gt~~y~aPE~l~~-----~~~~~~DiwslG~il~~ll 231 (494)
T 3lij_A 172 KE----KDALIKIVDFGLSAVFENQKK-----------MKERLGTAYYIAPEVLRK-----KYDEKCDVWSIGVILFILL 231 (494)
T ss_dssp SS----TTCCEEECCCTTCEECBTTBC-----------BCCCCSCTTTCCHHHHTT-----CBCTHHHHHHHHHHHHHHH
T ss_pred CC----CCCcEEEEECCCCeECCCCcc-----------ccccCCCcCeeCHHHHcc-----cCCCchhHHHHHHHHHHHH
Confidence 42 125699999999976543221 113469999999999863 5889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+....++...+..+........+ ...++.+.+|+.+||+.||.+|||+.
T Consensus 232 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~R~s~~ 287 (494)
T 3lij_A 232 AGYPPFGGQTDQEILRKVEKGKYTFDSPEW------------------------KNVSEGAKDLIKQMLQFDSQRRISAQ 287 (494)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCSGGG------------------------TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCCchhc------------------------ccCCHHHHHHHHHHCCCChhhCccHH
Confidence 999999999888888888766543221111 13456699999999999999999999
Q ss_pred HHHHHHHhhc
Q 001152 1120 DLYEMFVART 1129 (1137)
Q Consensus 1120 EVL~~L~~~~ 1129 (1137)
|+++|+|++.
T Consensus 288 e~l~hp~~~~ 297 (494)
T 3lij_A 288 QALEHPWIKE 297 (494)
T ss_dssp HHHTCHHHHH
T ss_pred HHhcCccccc
Confidence 9999999974
No 89
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.5e-39 Score=356.60 Aligned_cols=265 Identities=26% Similarity=0.355 Sum_probs=212.7
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+|++.+.||+|+||.||+|++. +..+|+|+.... .......+. +.+|+.++++++||||+++++++.+.
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~ 77 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYG--SMTEAEKQM----LVSEVNLLRELKHPNIVRYYDRIIDR 77 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECT--TCCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEEG
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcc--cCCHHHHHH----HHHHHHHHHhcCCCCCCeEEEEEecC
Confidence 4678999999999999999999985 467888875433 222333333 48899999999999999999988643
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----eeeccCCC
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH-----IMHRDIKS 952 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~g-----IIHrDLKP 952 (1137)
.. ...++||||+++++|.+++..... ....+++..++.|+.||+.||+|||++| |+||||||
T Consensus 78 ~~------------~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p 144 (279)
T 2w5a_A 78 TN------------TTLYIVMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144 (279)
T ss_dssp GG------------TEEEEEEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSG
T ss_pred CC------------ceEEEEEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccch
Confidence 21 167999999999999999986432 2346999999999999999999999999 99999999
Q ss_pred CCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001152 953 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1032 (1137)
Q Consensus 953 ~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1032 (1137)
+|||++.+ +.+||+|||++......... .....||+.|+|||++.+ ..++.++||||||
T Consensus 145 ~NIl~~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG 203 (279)
T 2w5a_A 145 ANVFLDGK-------QNVKLGDFGLARILNHDTSF----------AKTFVGTPYYMSPEQMNR----MSYNEKSDIWSLG 203 (279)
T ss_dssp GGEEECSS-------SCEEECCCCHHHHC---CHH----------HHHHHSCCTTCCHHHHHC----C-CCHHHHHHHHH
T ss_pred hhEEEcCC-------CCEEEecCchheeecccccc----------ccccCCCccccChHHhcc----CCCCchhhHHHHH
Confidence 99999877 78999999998765432111 012358999999999875 4678999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1033 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1033 viL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
+++|+|++|..||......++...+..+..+.++. ..++++.+++.+||+.||
T Consensus 204 ~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p 256 (279)
T 2w5a_A 204 CLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY---------------------------RYSDELNEIITRMLNLKD 256 (279)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSG
T ss_pred HHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCc---------------------------ccCHHHHHHHHHHcCCCc
Confidence 99999999999999888887777776665443321 234569999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001152 1113 TERPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~s 1131 (1137)
.+|||+.||++++|+....
T Consensus 257 ~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 257 YHRPSVEEILENPLILEHH 275 (279)
T ss_dssp GGSCCHHHHHTSTTCCGGG
T ss_pred ccCCCHHHHHhChhhhhhc
Confidence 9999999999999987653
No 90
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=368.06 Aligned_cols=284 Identities=19% Similarity=0.222 Sum_probs=205.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
+.+|++.+.||+|+||+||+|++. +..||+|+...... .... ..+.+|+.+++.++||||+++++++.+..
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 73 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAP----CTAIREVSLLKDLKHANIVTLHDIIHTEK 73 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------C----CCCCCCHHHHSCCCCTTBCCEEEEEECSS
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc---cccc----hhHHHHHHHHHhcCCCCCCeeeeEEeeCC
Confidence 468999999999999999999985 56788887643321 1111 12256999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||++ ++|.+++... ...+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 74 --------------~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~ 134 (324)
T 3mtl_A 74 --------------SLTLVFEYLD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN 134 (324)
T ss_dssp --------------CEEEEEECCS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC
T ss_pred --------------EEEEEecccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC
Confidence 5699999997 7999988762 34699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 135 ~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l 194 (324)
T 3mtl_A 135 ER-------GELKLADFGLARAKSIPTK----------TYDNEVVTLWYRPPDILLG---STDYSTQIDMWGVGCIFYEM 194 (324)
T ss_dssp TT-------CCEEECSSSEEECC----------------------CGGGCCHHHHTT---CCCCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccCcccccccCCcc----------ccccccCcccccChhhhcC---CCCCCcHHHHHHHHHHHHHH
Confidence 87 7899999999875443211 1123468999999999875 24678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhccccccc-cc-ccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHE-VA-QSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
++|..||.+....+....+...........+.......... .. ...............++++.+|+.+||+.||.+||
T Consensus 195 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 274 (324)
T 3mtl_A 195 ATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI 274 (324)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCC
Confidence 99999999988877766664322111111111000000000 00 00000000111124567799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|++|+++|+|+...
T Consensus 275 t~~e~l~hp~f~~~ 288 (324)
T 3mtl_A 275 SAEDAMKHPFFLSL 288 (324)
T ss_dssp CHHHHTTSGGGGGG
T ss_pred CHHHHhcChhhhhc
Confidence 99999999999754
No 91
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.8e-39 Score=370.90 Aligned_cols=285 Identities=19% Similarity=0.218 Sum_probs=206.2
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|.+. +..||+|+. .......... .++.+|+.+++.++||||+++++++.....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~--~~~~~~~~~~----~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 98 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL--YRPFQSELFA----KRAYRELRLLKHMRHENVIGLLDVFTPDET 98 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEEC--SSTTSSHHHH----HHHHHHHHHHHHCCBTTBCCCSEEECSCSS
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEe--CccccCHHHH----HHHHHHHHHHHhCCCcCCCCceeeEecCCc
Confidence 57999999999999999999985 566888763 2222222222 345899999999999999999999876532
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
. ......|+||||+ +++|.++++. ..+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 99 ~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~ 163 (367)
T 1cm8_A 99 L--------DDFTDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE 163 (367)
T ss_dssp T--------TTCCCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred c--------ccCceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcC
Confidence 1 1122569999999 7999999875 35899999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+++..... ....++|+.|+|||++.+ ...++.++|||||||++|||+
T Consensus 164 ~-------~~~kl~Dfg~a~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~ell 220 (367)
T 1cm8_A 164 D-------CELKILDFGLARQADSE-------------MTGYVVTRWYRAPEVILN---WMRYTQTVDIWSVGCIMAEMI 220 (367)
T ss_dssp T-------CCEEECCCTTCEECCSS-------------CCSSCSCGGGCCTHHHHT---TTCCCTTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEeeecccccccc-------------cCcCcCCCCcCCHHHHhC---CCCCChhhhHHHHHHHHHHHH
Confidence 7 78999999999764321 113468999999999875 246889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhccccccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|+.||.+.+..+....+...........+.............. .............++.+.+|+.+||+.||.+||
T Consensus 221 ~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~ 300 (367)
T 1cm8_A 221 TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV 300 (367)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSC
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCC
Confidence 99999999888777666643222111111111100000000000 000011111124567799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|++|+++|+|+..-
T Consensus 301 t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 301 TAGEALAHPYFESL 314 (367)
T ss_dssp CHHHHHHSGGGTTT
T ss_pred CHHHHhcChHHHhh
Confidence 99999999999753
No 92
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.3e-39 Score=385.69 Aligned_cols=263 Identities=27% Similarity=0.324 Sum_probs=213.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.++||+|+||+||+|++. +..||+|+........ ...+ .+.+|+.++++++|||||++++++.+..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~- 94 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTS----TILREVELLKKLDHPNIMKLFEILEDSS- 94 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC--SCHH----HHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc--hHHH----HHHHHHHHHHhCCCCCcCeEEEEEEcCC-
Confidence 56999999999999999999985 5779999864332111 1122 3478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++... ..+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 95 -------------~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~ 156 (486)
T 3mwu_A 95 -------------SFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156 (486)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESS
T ss_pred -------------EEEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEec
Confidence 679999999999999988762 46999999999999999999999999999999999999975
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
.. ..+.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus 157 ~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~ll 216 (486)
T 3mwu_A 157 KE----KDCDIKIIDFGLSTCFQQNTK-----------MKDRIGTAYYIAPEVLRG-----TYDEKCDVWSAGVILYILL 216 (486)
T ss_dssp SS----TTCCEEECSCSCTTTBCCC---------------CCTTGGGGCCGGGGGS-----CCCHHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEEECCcCeECCCCCc-----------cCCCcCCCCCCCHHHhCC-----CCCchhhHHHHHHHHHHHH
Confidence 41 226799999999875543211 123469999999999874 4889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+....++...+..+..+.....+ ...++++.+|+.+||+.||.+|||+.
T Consensus 217 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~R~t~~ 272 (486)
T 3mwu_A 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQW------------------------RTISDDAKDLIRKMLTFHPSLRITAT 272 (486)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCSCSGGG------------------------GGSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCCCccc------------------------CCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 999999998888888888765533211111 13456799999999999999999999
Q ss_pred HHHHHHHhhcCCCC
Q 001152 1120 DLYEMFVARTSSSI 1133 (1137)
Q Consensus 1120 EVL~~L~~~~~ss~ 1133 (1137)
|+++|+|+......
T Consensus 273 ~~l~hp~~~~~~~~ 286 (486)
T 3mwu_A 273 QCLEHPWIQKYSSE 286 (486)
T ss_dssp HHHHCHHHHHTCCC
T ss_pred HHhcCHhhccCccc
Confidence 99999999865443
No 93
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.1e-39 Score=363.08 Aligned_cols=280 Identities=24% Similarity=0.277 Sum_probs=200.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
+.+|++.+.||+|+||.||+|++. +..||+|+...... ....+ .+.+|+.+|++++|||||++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~ 77 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELARE----KVMREVKALAKLEHPGIVRYFNAWLETP 77 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST---TTHHH----HHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc---hhHHH----HHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence 356999999999999999999985 57799998654321 22222 3488999999999999999999986543
Q ss_pred CCC-----------C--------------------------------CCCCCccccceEEEEEeeccCCCHHHHHHHhhh
Q 001152 879 WLP-----------S--------------------------------ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE 915 (1137)
Q Consensus 879 ~~~-----------~--------------------------------~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~ 915 (1137)
... . ..-.........++||||+++++|.+++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-- 155 (332)
T 3qd2_B 78 PEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR-- 155 (332)
T ss_dssp SCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC--
T ss_pred cchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc--
Confidence 100 0 0000001122479999999999999999763
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccc--cC
Q 001152 916 TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA--HR 993 (1137)
Q Consensus 916 ~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~--~~ 993 (1137)
......++..++.|+.||+.||+|||++||+||||||+|||++.+ +.+||+|||+++............ ..
T Consensus 156 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-------~~~kL~DfG~a~~~~~~~~~~~~~~~~~ 228 (332)
T 3qd2_B 156 CSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD-------DVVKVGDFGLVTAMDQDEEEQTVLTPMP 228 (332)
T ss_dssp CSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT-------CCEEECCCTTCEECSCC-----------
T ss_pred cCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCC-------CCEEEeecCcccccccchhhcccccccc
Confidence 222356777899999999999999999999999999999999977 789999999998665432110000 00
Q ss_pred CCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhc
Q 001152 994 GIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALG 1073 (1137)
Q Consensus 994 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~ 1073 (1137)
.........||+.|+|||++.+ ..++.++|||||||++|+|++|..|+.. .......+.....+.
T Consensus 229 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~--------- 293 (332)
T 3qd2_B 229 AYATHTGQVGTKLYMSPEQIHG----NNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPL--------- 293 (332)
T ss_dssp ---CCCSCC-CGGGSCHHHHHC----CCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCH---------
T ss_pred ccccccccCCCcCccChHHhcC----CCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCc---------
Confidence 0011234569999999999975 5688999999999999999998766531 222233333322211
Q ss_pred ccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1074 SCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1074 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
.....++++.+++.+||+.||.+|||++|+++|+|+..
T Consensus 294 ------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 294 ------------------LFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp ------------------HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred ------------------ccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 11134456899999999999999999999999999864
No 94
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.3e-39 Score=366.35 Aligned_cols=290 Identities=21% Similarity=0.269 Sum_probs=213.5
Q ss_pred CCCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeee
Q 001152 796 LDPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 873 (1137)
Q Consensus 796 ~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~ 873 (1137)
+....+.+|++.+.||+|+||.||+|++. +..||+|++... .......+ .+.+|+.++++++||||++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~ 92 (331)
T 4aaa_A 19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES--DDDKMVKK----IAMREIKLLKQLRHENLVNLLEV 92 (331)
T ss_dssp CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESC--SSCHHHHH----HHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecC--CCchHHHH----HHHHHHHHHhhCCCCCEeeEEEE
Confidence 55667889999999999999999999986 567888875432 22222222 34789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCC
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 953 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~ 953 (1137)
+.+.. ..++||||+++++|..++.. ...+++..+..|+.||+.||+|||++||+||||||+
T Consensus 93 ~~~~~--------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~ 153 (331)
T 4aaa_A 93 CKKKK--------------RWYLVFEFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPE 153 (331)
T ss_dssp EEETT--------------EEEEEEECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred eecCC--------------EEEEEEecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChh
Confidence 98765 67999999998888887654 246999999999999999999999999999999999
Q ss_pred CeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001152 954 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1033 (1137)
Q Consensus 954 NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1033 (1137)
|||++.+ +.+||+|||++......... .....||+.|+|||++.+ ...++.++|||||||
T Consensus 154 Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~t~~y~aPE~~~~---~~~~~~~~Di~slG~ 213 (331)
T 4aaa_A 154 NILVSQS-------GVVKLCDFGFARTLAAPGEV----------YDDEVATRWYRAPELLVG---DVKYGKAVDVWAIGC 213 (331)
T ss_dssp GEEECTT-------SCEEECCCTTC----------------------CCCCCTTCCHHHHTT---CTTCCTHHHHHHHHH
T ss_pred eEEEcCC-------CcEEEEeCCCceeecCCccc----------cCCCcCCccccCcccccC---CCCcchHHHHHHHHH
Confidence 9999887 78999999998755432211 123468999999999875 236789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhH---HhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 001152 1034 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDE---LEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE 1110 (1137)
Q Consensus 1034 iL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~ 1110 (1137)
++|+|++|..||.+....+....+........+.. +...........................++++.+|+.+||+.
T Consensus 214 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 293 (331)
T 4aaa_A 214 LVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHI 293 (331)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhcc
Confidence 99999999999998877766655533222222211 111100000111110111111111235677899999999999
Q ss_pred CCCCCCCHHHHHHHHHhhcC
Q 001152 1111 NPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1111 DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
||.+|||++|+++|+|+...
T Consensus 294 dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 294 DPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp SGGGSCCGGGGGGSHHHHGG
T ss_pred CcccCCCHHHHhcCchhccC
Confidence 99999999999999999753
No 95
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.3e-38 Score=352.82 Aligned_cols=265 Identities=24% Similarity=0.303 Sum_probs=209.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
++|++.+.||+|+||.||+|++. +..+|+|+............ .....+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRG--VSREEIEREVNILREIRHPNIITLHDIFENKT- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSS--BCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccc--hHHHHHHHHHHHHHhCCCCCeeehhheecCCC-
Confidence 35899999999999999999985 57899998654432221110 01123478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 82 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~ 143 (283)
T 3bhy_A 82 -------------DVVLILELVSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD 143 (283)
T ss_dssp -------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred -------------eEEEEEeecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEec
Confidence 67999999999999999976 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+. .....+||+|||++........ .....||+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 144 ~~---~~~~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 205 (283)
T 3bhy_A 144 KN---VPNPRIKLIDFGIAHKIEAGNE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYILL 205 (283)
T ss_dssp SS---SSSCCEEECCCTTCEECC-------------------CCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CC---CCCCceEEEecccceeccCCCc-----------ccccCCCcCccCcceecC----CCCCcchhhhhHHHHHHHHH
Confidence 62 1224799999999876543211 113468999999999875 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+....+....+........... ....++.+.+++.+||+.||.+|||+.
T Consensus 206 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ 261 (283)
T 3bhy_A 206 SGASPFLGETKQETLTNISAVNYDFDEEY------------------------FSNTSELAKDFIRRLLVKDPKRRMTIA 261 (283)
T ss_dssp HSSCTTCCSSHHHHHHHHHTTCCCCCHHH------------------------HTTCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred HCCCCCCCcchHHHHHHhHhcccCCcchh------------------------cccCCHHHHHHHHHHccCCHhHCcCHH
Confidence 99999998887777776655443221111 113456699999999999999999999
Q ss_pred HHHHHHHhhc
Q 001152 1120 DLYEMFVART 1129 (1137)
Q Consensus 1120 EVL~~L~~~~ 1129 (1137)
|+++|+|+..
T Consensus 262 ~~l~h~~~~~ 271 (283)
T 3bhy_A 262 QSLEHSWIKA 271 (283)
T ss_dssp HHHHCHHHHH
T ss_pred HHHhCHHHHH
Confidence 9999999874
No 96
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.4e-38 Score=351.31 Aligned_cols=260 Identities=23% Similarity=0.279 Sum_probs=204.6
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
.+.+|++.+.||+|+||.||+|.+. +..+|+|+..... ........++.+|+.+++.++||||+++++++...
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 83 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK-----IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP 83 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc-----ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 4678999999999999999999985 5789999864321 11112223458899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
. ..++||||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||++
T Consensus 84 ~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~ 144 (276)
T 2h6d_A 84 T--------------DFFMVMEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144 (276)
T ss_dssp S--------------EEEEEEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE
T ss_pred C--------------eEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE
Confidence 5 679999999999999999762 358999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||++........ .....||+.|+|||++.+. ...+.++||||||+++|+
T Consensus 145 ~~~-------~~~~l~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~~l~~ 203 (276)
T 2h6d_A 145 DAH-------MNAKIADFGLSNMMSDGEF-----------LRTSCGSPNYAAPEVISGR---LYAGPEVDIWSCGVILYA 203 (276)
T ss_dssp CTT-------SCEEECCCCGGGCCCC------------------------CCTGGGTTS---CCCHHHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeecccccccCCCcc-----------eecccCCccccCHHHHcCC---CCCCccchHHHHHHHHHH
Confidence 877 7899999999876543211 1134689999999998752 234689999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
|++|..||......++...+..+... ++. ..++.+.+++.+||+.||.+|||
T Consensus 204 l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps 255 (276)
T 2h6d_A 204 LLCGTLPFDDEHVPTLFKKIRGGVFY-IPE---------------------------YLNRSVATLLMHMLQVDPLKRAT 255 (276)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhCCCCCCCCcHHHHHHHhhcCccc-Cch---------------------------hcCHHHHHHHHHHccCChhhCCC
Confidence 99999999988777777666554321 110 23445899999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001152 1118 AGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1118 a~EVL~~L~~~~~ss 1132 (1137)
++|+++|+|+....+
T Consensus 256 ~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 256 IKDIREHEWFKQDLP 270 (276)
T ss_dssp HHHHHHSHHHHTTCC
T ss_pred HHHHHhChhhccCch
Confidence 999999999986543
No 97
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.8e-38 Score=354.28 Aligned_cols=261 Identities=21% Similarity=0.286 Sum_probs=212.2
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 797 DPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 797 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
++....+|++.+.||+|+||.||+|.+. +..+|+|+....... .....+. +.+|+.+++.++||||+++++++
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~ 84 (294)
T 2rku_A 10 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREK----MSMEISIHRSLAHQHVVGFHGFF 84 (294)
T ss_dssp ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHH----HHHHHHHHHTCCCTTBCCEEEEE
T ss_pred CCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-CHHHHHH----HHHHHHHHHhCCCCCEeeeeeee
Confidence 3455678999999999999999999986 467888876433221 2223333 48899999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|
T Consensus 85 ~~~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~N 145 (294)
T 2rku_A 85 EDND--------------FVFVVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN 145 (294)
T ss_dssp ECSS--------------EEEEEEECCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred ccCC--------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHh
Confidence 8765 67999999999999998876 2468999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||++
T Consensus 146 il~~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~ 204 (294)
T 2rku_A 146 LFLNED-------LEVKIGDFGLATKVEYDGE----------RKKVLCGTPNYIAPEVLSK----KGHSFEVDVWSIGCI 204 (294)
T ss_dssp EEECTT-------CCEEECCCTTCEECCSTTC----------CBCCCCSCCSSCCHHHHTT----SCBCTHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEEeccCceecccCcc----------ccccccCCCCcCCcchhcc----CCCCchhhHHHHHHH
Confidence 999977 7899999999876542211 1123468999999999875 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|+|++|..||......+....+...... ++. ..++.+.+++.+||+.||++
T Consensus 205 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~li~~~l~~~p~~ 256 (294)
T 2rku_A 205 MYTLLVGKPPFETSCLKETYLRIKKNEYS-IPK---------------------------HINPVAASLIQKMLQTDPTA 256 (294)
T ss_dssp HHHHHHSSCTTCCSSHHHHHHHHHTTCCC-CCT---------------------------TSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHhhccCC-Ccc---------------------------ccCHHHHHHHHHHcccChhh
Confidence 99999999999987777666655443321 110 23445899999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001152 1115 RPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~ 1130 (1137)
|||++|+++|+|+...
T Consensus 257 Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 257 RPTINELLNDEFFTSG 272 (294)
T ss_dssp SCCGGGGGGSHHHHTS
T ss_pred CcCHHHHhhChheecC
Confidence 9999999999999854
No 98
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.3e-38 Score=365.19 Aligned_cols=301 Identities=17% Similarity=0.209 Sum_probs=212.8
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
..+.+|++.+.||+|+||+||+|++. +..||+|+....... ..... .+.+|+.+++.++||||+++++++..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~ 87 (351)
T 3mi9_A 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPI----TALREIKILQLLKHENVVNLIEICRT 87 (351)
T ss_dssp CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SSSCH----HHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--ccchH----HHHHHHHHHHhccCCCcccHhheeec
Confidence 35688999999999999999999984 567888875333221 11112 23789999999999999999999886
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
...... ......++||||++ ++|.+.+.. ....+++..++.|+.||+.||+|||++||+||||||+|||
T Consensus 88 ~~~~~~------~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl 156 (351)
T 3mi9_A 88 KASPYN------RCKGSIYLVFDFCE-HDLAGLLSN----VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 156 (351)
T ss_dssp C--------------CEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred cccccc------cCCceEEEEEeccC-CCHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEE
Confidence 431100 01226799999997 688887764 2346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||+++......... ........||+.|+|||++.+ ...++.++|||||||++|
T Consensus 157 ~~~~-------~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 220 (351)
T 3mi9_A 157 ITRD-------GVLKLADFGLARAFSLAKNSQ------PNRYTNRVVTLWYRPPELLLG---ERDYGPPIDLWGAGCIMA 220 (351)
T ss_dssp ECTT-------SCEEECCCTTCEECCCCSSSS------CCCCCSSCSCGGGCCHHHHTT---CCSCCTHHHHHHHHHHHH
T ss_pred EcCC-------CCEEEccchhccccccccccc------ccccCCcccccCccCchhhcC---CCCCCcHhHHHHHHHHHH
Confidence 9987 789999999997654322110 111224468999999999875 245789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCC---CCchhHHhhhcccccccccccC-CCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMGKR---PRLTDELEALGSCHEHEVAQSG-SGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g~~---p~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
+|++|..||.+....+....+..... +..................... ............++.+.+|+.+||+.||
T Consensus 221 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 300 (351)
T 3mi9_A 221 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 300 (351)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSG
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCCh
Confidence 99999999999887776666633221 1111111110000000000000 0000000011235678999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCC
Q 001152 1113 TERPTAGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~ss 1132 (1137)
.+|||++|+++|+|+.....
T Consensus 301 ~~R~t~~e~l~hp~f~~~~~ 320 (351)
T 3mi9_A 301 AQRIDSDDALNHDFFWSDPM 320 (351)
T ss_dssp GGSCCHHHHHTSGGGGSSSC
T ss_pred hhCCCHHHHhCCCCcCCCCC
Confidence 99999999999999986543
No 99
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.1e-39 Score=385.33 Aligned_cols=261 Identities=24% Similarity=0.323 Sum_probs=213.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|++. +..+|||+........ ....+. +.+|+.++++++|||||++++++.+..
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~- 99 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKES----LLREVQLLKQLDHPNIMKLYEFFEDKG- 99 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB-SSCHHH----HHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc-chHHHH----HHHHHHHHHhCCCCCCCcEEEEEEeCC-
Confidence 46999999999999999999985 5789999864432211 112223 478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+.+++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 100 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 161 (484)
T 3nyv_A 100 -------------YFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLES 161 (484)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred -------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEec
Confidence 67999999999999999875 356999999999999999999999999999999999999964
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
. ...+.+||+|||++......... ....||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus 162 ~----~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~ll 221 (484)
T 3nyv_A 162 K----SKDANIRIIDFGLSTHFEASKKM-----------KDKIGTAYYIAPEVLHG-----TYDEKCDVWSTGVILYILL 221 (484)
T ss_dssp S----STTCCEEECCTTHHHHBCCCCSH-----------HHHTTGGGTCCHHHHHT-----CCCTHHHHHHHHHHHHHHH
T ss_pred C----CCCCcEEEEeeeeeEEccccccc-----------ccCCCCccccCceeecC-----CCCCcceeHHHHHHHHHHH
Confidence 3 11278999999998765432211 13469999999999874 5789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+.+..++...+..+........+ ...++++.+|+.+||+.||.+|||+.
T Consensus 222 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~R~s~~ 277 (484)
T 3nyv_A 222 SGCPPFNGANEYDILKKVEKGKYTFELPQW------------------------KKVSESAKDLIRKMLTYVPSMRISAR 277 (484)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCSGGG------------------------GGSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHcCCCCCCCccc------------------------ccCCHHHHHHHHHHCCCChhHCcCHH
Confidence 999999999988888888766532211111 13456799999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001152 1120 DLYEMFVARTS 1130 (1137)
Q Consensus 1120 EVL~~L~~~~~ 1130 (1137)
|+++|+|+...
T Consensus 278 e~l~h~~~~~~ 288 (484)
T 3nyv_A 278 DALDHEWIQTY 288 (484)
T ss_dssp HHHTSHHHHHH
T ss_pred HHhhChhhccc
Confidence 99999999753
No 100
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.9e-38 Score=365.21 Aligned_cols=259 Identities=27% Similarity=0.393 Sum_probs=208.5
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..|++.+.||+|+||+||+|++. +..||+|+...... ......+ .+.+|+.++++++|||||++++++....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~- 127 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQ----DIIKEVRFLQKLRHPNTIQYRGCYLREH- 127 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHH----HHHHHHHHHHHCCCTTBCCEEEEEEETT-
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHH----HHHHHHHHHHhCCCCCEeeEEEEEEECC-
Confidence 34899999999999999999974 56788887543321 1122223 3489999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||++ |+|.+++... ...+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 128 -------------~~~lv~e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 189 (348)
T 1u5q_A 128 -------------TAWLVMEYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE 189 (348)
T ss_dssp -------------EEEEEEECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET
T ss_pred -------------eEEEEEecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC
Confidence 6799999997 7898888642 246999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++...... ....||+.|+|||++.+. ....++.++|||||||++|||+
T Consensus 190 ~-------~~~kL~DfG~a~~~~~~--------------~~~~gt~~y~aPE~~~~~-~~~~~~~~~DiwslG~il~ell 247 (348)
T 1u5q_A 190 P-------GLVKLGDFGSASIMAPA--------------NSFVGTPYWMAPEVILAM-DEGQYDGKVDVWSLGITCIELA 247 (348)
T ss_dssp T-------TEEEECCCTTCBSSSSB--------------CCCCSCGGGCCHHHHHTT-SSCCBCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeeccCceecCCC--------------CcccCCcceeCHhhhccc-cCCCCCcHHHHHHHHHHHHHHH
Confidence 7 78999999998654321 134699999999998632 1356889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+.+..+....+.....+.... ...++.+.+|+.+||+.||.+|||++
T Consensus 248 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dP~~Rps~~ 301 (348)
T 1u5q_A 248 ERKPPLFNMNAMSALYHIAQNESPALQS--------------------------GHWSEYFRNFVDSCLQKIPQDRPTSE 301 (348)
T ss_dssp HSSCTTTTSCHHHHHHHHHHSCCCCCCC--------------------------TTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred hCCCCCCCCChHHHHHHHHhcCCCCCCC--------------------------CCCCHHHHHHHHHHcccChhhCcCHH
Confidence 9999998887776666665444332110 03345689999999999999999999
Q ss_pred HHHHHHHhhcCCC
Q 001152 1120 DLYEMFVARTSSS 1132 (1137)
Q Consensus 1120 EVL~~L~~~~~ss 1132 (1137)
++++|+|+....+
T Consensus 302 ~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 302 VLLKHRFVLRERP 314 (348)
T ss_dssp HHTTCHHHHSCCC
T ss_pred HHhhChhhhccCC
Confidence 9999999986543
No 101
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.5e-39 Score=380.50 Aligned_cols=268 Identities=20% Similarity=0.284 Sum_probs=200.9
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||+||+|.+. +..||+|+...+...............+.+|+.+|++++|||||++++++...
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-- 212 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-- 212 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS--
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 67999999999999999999985 46899998765433222211112222458899999999999999999997643
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 213 -------------~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~ 274 (419)
T 3i6u_A 213 -------------DYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 274 (419)
T ss_dssp -------------EEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred -------------ceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEec
Confidence 46999999999999888754 356999999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
++ ....+||+|||+++....... .....||+.|+|||++.+. ....++.++|||||||++|+|+
T Consensus 275 ~~----~~~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~-~~~~~~~~~DiwslG~il~~ll 338 (419)
T 3i6u_A 275 QE----EDCLIKITDFGHSKILGETSL-----------MRTLCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICL 338 (419)
T ss_dssp SS----SSCCEEECCSSTTTSCC----------------------CTTCCTTTTC-----CTTHHHHHHHHHHHHHHHHH
T ss_pred CC----CcceEEEeecccceecCCCcc-----------ccccCCCCCccCceeeecC-CCCCCCchhhhHhHHHHHHHHH
Confidence 42 125699999999976543211 1234699999999998632 1246789999999999999999
Q ss_pred hCCCCCCCCCH-HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 TLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 TG~~Pf~~~~~-~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+|..||..... ..+...+..+.....+..+ ...++.+.+|+.+||+.||.+|||+
T Consensus 339 tg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~Rps~ 394 (419)
T 3i6u_A 339 SGYPPFSEHRTQVSLKDQITSGKYNFIPEVW------------------------AEVSEKALDLVKKLLVVDPKARFTT 394 (419)
T ss_dssp HSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH------------------------TTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HCCCCCCCCcchHHHHHHHhcCCCCCCchhh------------------------cccCHHHHHHHHHHccCChhHCcCH
Confidence 99999976432 2344445554433322211 1345669999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001152 1119 GDLYEMFVART 1129 (1137)
Q Consensus 1119 ~EVL~~L~~~~ 1129 (1137)
+|+++|+|+..
T Consensus 395 ~e~l~hp~~~~ 405 (419)
T 3i6u_A 395 EEALRHPWLQD 405 (419)
T ss_dssp HHHHHSGGGCC
T ss_pred HHHhCCcccCC
Confidence 99999999964
No 102
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=356.98 Aligned_cols=266 Identities=22% Similarity=0.279 Sum_probs=207.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
+.+|++.+.||+|+||.||+|.+. +..+|+|+.......... .....+.+|+.++++++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 79 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIP----NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE 79 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHST----THHHHHHHHHHHHTTCCCTTBCCEEEEEECC-
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccc----hhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence 468999999999999999999984 467888886433211101 11234588999999999999999999986432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
. ...++||||++++ |.+++... ....+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 80 ~------------~~~~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~ 143 (305)
T 2wtk_C 80 K------------QKMYMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT 143 (305)
T ss_dssp --------------CEEEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred C------------CeEEEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc
Confidence 1 1579999999855 88877652 345699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++......... .......||+.|+|||++.+. ...++.++||||||+++|+|
T Consensus 144 ~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~--~~~~~~~~Di~slG~il~~l 206 (305)
T 2wtk_C 144 TG-------GTLKISALGVAEALHPFAAD--------DTCRTSQGSPAFQPPEIANGL--DTFSGFKVDIWSAGVTLYNI 206 (305)
T ss_dssp TT-------CCEEECCCTTCEECCTTCSS--------CEECCCCSCGGGCCHHHHTCC--SCEESHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEeeccccccccCccccc--------cccccCCCCCCCcChhhccCc--ccCCcchhhHHHHHHHHHHH
Confidence 77 78999999998765432111 001134589999999998752 23347899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+....+....+..+..+. +. .+++.+.+++.+||+.||.+|||+
T Consensus 207 ~~g~~p~~~~~~~~~~~~i~~~~~~~-~~---------------------------~~~~~l~~li~~~l~~dp~~Rps~ 258 (305)
T 2wtk_C 207 TTGLYPFEGDNIYKLFENIGKGSYAI-PG---------------------------DCGPPLSDLLKGMLEYEPAKRFSI 258 (305)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHCCCCC-CS---------------------------SSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HhCCCCCCCchHHHHHHHHhcCCCCC-CC---------------------------ccCHHHHHHHHHHccCChhhCCCH
Confidence 99999999888777777765543211 10 234568999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001152 1119 GDLYEMFVARTSS 1131 (1137)
Q Consensus 1119 ~EVL~~L~~~~~s 1131 (1137)
+|+++|+|+....
T Consensus 259 ~~ll~~~~~~~~~ 271 (305)
T 2wtk_C 259 RQIRQHSWFRKKH 271 (305)
T ss_dssp HHHHHSHHHHSCC
T ss_pred HHHhcCcccccCC
Confidence 9999999998653
No 103
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.1e-38 Score=353.80 Aligned_cols=255 Identities=25% Similarity=0.350 Sum_probs=206.7
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
...+|++.+.||+|+||+||+|.+.+ ..+|+|+..... ... +. +.+|+.++++++||||+++++++.+..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~---~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~ 92 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSE---DE----FIEEAKVMMNLSHEKLVQLYGVCTKQR 92 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS--BCH---HH----HHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC--CCH---HH----HHHHHHHHhcCCCCCEeeEEEEEecCC
Confidence 45689999999999999999999865 578998864321 111 22 378999999999999999999997655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 93 --------------~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~ 154 (283)
T 3gen_A 93 --------------PIFIITEYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN 154 (283)
T ss_dssp --------------SEEEEECCCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC
T ss_pred --------------CeEEEEeccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc
Confidence 569999999999999999752 24599999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++.......... .....+|+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 155 ~~-------~~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~~l~~l 214 (283)
T 3gen_A 155 DQ-------GVVKVSDFGLSRYVLDDEYTS---------SVGSKFPVRWSPPEVLMY----SKFSSKSDIWAFGVLMWEI 214 (283)
T ss_dssp TT-------SCEEECSTTGGGGBCCHHHHS---------TTSTTSCGGGCCHHHHHH----CCCSHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEcccccccccccccccc---------ccCCccCcccCCHHHhcc----CCCCchhhHHHHHHHHHHH
Confidence 77 789999999997654322110 112347788999999986 4688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1039 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1039 LT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
++ |..||......+....+..+.....+. ..++.+.+++.+||+.||.+|||
T Consensus 215 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps 267 (283)
T 3gen_A 215 YSLGKMPYERFTNSETAEHIAQGLRLYRPH---------------------------LASEKVYTIMYSCWHEKADERPT 267 (283)
T ss_dssp HTTTCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSGGGSCC
T ss_pred HhCCCCCccccChhHHHHHHhcccCCCCCC---------------------------cCCHHHHHHHHHHccCChhHCcC
Confidence 98 999999888888877776654332221 22345899999999999999999
Q ss_pred HHHHHHHHHhh
Q 001152 1118 AGDLYEMFVAR 1128 (1137)
Q Consensus 1118 a~EVL~~L~~~ 1128 (1137)
++|+++++...
T Consensus 268 ~~~ll~~L~~~ 278 (283)
T 3gen_A 268 FKILLSNILDV 278 (283)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999865
No 104
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.5e-38 Score=355.00 Aligned_cols=266 Identities=24% Similarity=0.353 Sum_probs=199.3
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHh--CCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~--L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||+||+|++.+..||||++... ..+. +.+|.+++.. ++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-------~~~~----~~~e~~~~~~~~l~h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR-------DEKS----WFRETELYNTVMLRHENILGFIASDMTSR 75 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG-------GHHH----HHHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc-------cchh----hHHHHHHHHHhhccCcCeeeEEEeecccc
Confidence 457999999999999999999999999999986422 1122 2456666665 78999999999976532
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCeeeccC
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDI 950 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLH--------s~gIIHrDL 950 (1137)
. .....++||||+++|+|.++++. ..+++..++.|+.||+.||+||| ++||+||||
T Consensus 76 ~----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dl 139 (301)
T 3q4u_A 76 H----------SSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDL 139 (301)
T ss_dssp T----------TEEEEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCC
T ss_pred C----------CCceeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCC
Confidence 1 12367999999999999999954 46999999999999999999999 999999999
Q ss_pred CCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCC--CCCchhhH
Q 001152 951 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDI 1028 (1137)
Q Consensus 951 KP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksDV 1028 (1137)
||+|||++.+ +.+||+|||+++.......... .......||+.|+|||++.+..... .++.++||
T Consensus 140 kp~Nill~~~-------~~~kl~Dfg~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv 206 (301)
T 3q4u_A 140 KSKNILVKKN-------GQCCIADLGLAVMHSQSTNQLD------VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206 (301)
T ss_dssp CGGGEEECTT-------SCEEECCCTTCEEEETTTTEEE------CCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHH
T ss_pred ChHhEEEcCC-------CCEEEeeCCCeeeccccccccc------ccccccccccceeChhhhcCcCCCCcccCCchhhH
Confidence 9999999977 7899999999976543322110 1112346999999999997621111 34579999
Q ss_pred HHHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHH-cCCCCCchhHHhhhcccccccccccCCCCCCchh
Q 001152 1029 WSYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA 1092 (1137)
Q Consensus 1029 WSLGviL~ELLTG----------~~Pf~~~~-----~~el~~~I~-~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1092 (1137)
|||||++|||++| ..||.... ...+...+. ....+.++.. ..
T Consensus 207 wslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 264 (301)
T 3q4u_A 207 WAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNR----------------------WF 264 (301)
T ss_dssp HHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG----------------------GG
T ss_pred HHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChh----------------------hc
Confidence 9999999999999 88885421 122222221 1112221111 11
Q ss_pred hhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001152 1093 ELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1093 ~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
....++++.+|+.+||+.||.+|||+.||++.+...
T Consensus 265 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 265 SDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp GSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 125677899999999999999999999999998754
No 105
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=369.30 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=212.2
Q ss_pred CCCceEeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCccee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 870 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~---------~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkl 870 (1137)
..+|++.+.||+|+||+||+|++.+ ..+|+|+.... ......+. +.+|+++++++ +|||||++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~hpnIv~~ 140 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD----LISEMEMMKMIGKHKNIINL 140 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCE
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc---cCHHHHHH----HHHHHHHHHHhcCCchhhhh
Confidence 4679999999999999999999732 45888875422 22333333 48899999999 89999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001152 871 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 939 (1137)
Q Consensus 871 lg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-----------~~~~ls~~~i~~I~~QIa~gL~y 939 (1137)
++++...+ ..++||||+++|+|.+++...... ....+++..++.|+.||+.||+|
T Consensus 141 ~~~~~~~~--------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 206 (382)
T 3tt0_A 141 LGACTQDG--------------PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 206 (382)
T ss_dssp EEEECSSS--------------SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eeeeccCC--------------ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence 99998765 459999999999999999873211 12459999999999999999999
Q ss_pred HHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCC
Q 001152 940 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1019 (1137)
Q Consensus 940 LHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1019 (1137)
||++||+||||||+|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+
T Consensus 207 LH~~~ivH~Dlkp~NIll~~~-------~~~kL~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~---- 267 (382)
T 3tt0_A 207 LASKKCIHRDLAARNVLVTED-------NVMKIADFGLARDIHHIDYY--------KKTTNGRLPVKWMAPEALFD---- 267 (382)
T ss_dssp HHHTTCCCSCCCGGGEEECTT-------CCEEECSCSCCCCSSCCCTT--------CCCTTCCCGGGGSCHHHHHS----
T ss_pred HHhCCEecCCCCcceEEEcCC-------CcEEEcccCccccccccccc--------ccccCCCCCcceeCHHHhcC----
Confidence 999999999999999999877 78999999999765432211 11123357889999999975
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001152 1020 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1098 (1137)
Q Consensus 1020 ~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1137)
..++.++|||||||++|+|++ |..||.+....++...+..+..+..+. .+++
T Consensus 268 ~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 320 (382)
T 3tt0_A 268 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS---------------------------NCTN 320 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCS---------------------------SCCH
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCH
Confidence 568899999999999999999 999999988888888777655433221 3345
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1099 FLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1099 ~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
++.+|+.+||+.||++|||++||++++....
T Consensus 321 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 321 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 6999999999999999999999999998763
No 106
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-38 Score=358.46 Aligned_cols=261 Identities=21% Similarity=0.360 Sum_probs=208.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 873 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~ 873 (1137)
..+|++.+.||+|+||.||+|.+. +..+|+|+.. .. ......+. +.+|+.++++++||||++++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~ 94 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK--EN-ASPSELRD----LLSEFNVLKQVNHPHVIKLYGA 94 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECC--TT-CCHHHHHH----HHHHHHHHTTCCCTTBCCEEEE
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEecc--CC-CCHHHHHH----HHHHHHHHhhCCCCceeeEEEE
Confidence 467999999999999999999872 2567888743 21 22333334 4889999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-------------------CCCCCCHHHHHHHHHHHH
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-------------------GEKHVSVKLALFIAQDVA 934 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-------------------~~~~ls~~~i~~I~~QIa 934 (1137)
+.+.+ ..++||||+++++|.+++...... ....+++..++.|+.||+
T Consensus 95 ~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 160 (314)
T 2ivs_A 95 CSQDG--------------PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160 (314)
T ss_dssp ECSSS--------------SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHH
T ss_pred EecCC--------------ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHH
Confidence 98765 459999999999999999863221 123489999999999999
Q ss_pred HHHHHHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhc
Q 001152 935 AALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR 1014 (1137)
Q Consensus 935 ~gL~yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 1014 (1137)
.||+|||++||+||||||+|||++.+ +.+||+|||++.......... ......+|+.|+|||++.
T Consensus 161 ~~l~~lH~~~ivH~dikp~NIli~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~ 225 (314)
T 2ivs_A 161 QGMQYLAEMKLVHRDLAARNILVAEG-------RKMKISDFGLSRDVYEEDSYV--------KRSQGRIPVKWMAIESLF 225 (314)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEEETT-------TEEEECCCTTCEECTTTSCEE--------CSSCCCSCGGGCCHHHHH
T ss_pred HHHHHHHHCCCcccccchheEEEcCC-------CCEEEccccccccccccccce--------eccCCCCcccccChhhhc
Confidence 99999999999999999999999977 789999999997654322110 112335788999999987
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001152 1015 AMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1093 (1137)
Q Consensus 1015 ~~~~~~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1137)
+ ..++.++|||||||++|+|++ |..||.+....++...+..+..+..+.
T Consensus 226 ~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 275 (314)
T 2ivs_A 226 D----HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD-------------------------- 275 (314)
T ss_dssp H----CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT--------------------------
T ss_pred C----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCc--------------------------
Confidence 6 457899999999999999999 999999887777776666554332221
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001152 1094 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1094 ~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
.+++++.+++.+||+.||.+|||+.|+++++...
T Consensus 276 -~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 276 -NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3445699999999999999999999999998764
No 107
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.5e-39 Score=373.90 Aligned_cols=257 Identities=25% Similarity=0.376 Sum_probs=208.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||.||+|++. +..||+|+.. .. ......+. +.+|+.+|++++|||||++++++....
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~ 185 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ET-LPPDLKAK----FLQEARILKQYSHPNIVRLIGVCTQKQ 185 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECC--TT-SCHHHHTT----TTHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcc--cc-CCHHHHHH----HHHHHHHHHhCCCCCEEEEEEEEecCC
Confidence 357999999999999999999995 5678888743 21 12233333 488999999999999999999997665
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++|+|.++++.. ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 186 --------------~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~ 247 (377)
T 3cbl_A 186 --------------PIYIVMELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT 247 (377)
T ss_dssp --------------SCEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------CcEEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc
Confidence 459999999999999999762 23589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||+++........ .......+++.|+|||++.+ ..++.++|||||||++|||
T Consensus 248 ~~-------~~~kl~DfG~s~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il~el 308 (377)
T 3cbl_A 248 EK-------NVLKISDFGMSREEADGVYA--------ASGGLRQVPVKWTAPEALNY----GRYSSESDVWSFGILLWET 308 (377)
T ss_dssp TT-------CCEEECCGGGCEECTTSEEE--------CCSSCCEEEGGGSCHHHHHH----CEEEHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEECcCCCceecCCCcee--------ecCCCCCCCcCcCCHhHhcc----CCCCchhhHHHHHHHHHHH
Confidence 77 78999999998754332111 00112235678999999875 4578999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1039 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1039 LT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
++ |..||.+....++...+..+.....+. .+++++.+|+.+||+.||++|||
T Consensus 309 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~Rps 361 (377)
T 3cbl_A 309 FSLGASPYPNLSNQQTREFVEKGGRLPCPE---------------------------LCPDAVFRLMEQCWAYEPGQRPS 361 (377)
T ss_dssp HTTSCCSSTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCchhCcC
Confidence 98 999999988888777776655433221 34456999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001152 1118 AGDLYEMFVAR 1128 (1137)
Q Consensus 1118 a~EVL~~L~~~ 1128 (1137)
+++|++.+...
T Consensus 362 ~~~i~~~L~~i 372 (377)
T 3cbl_A 362 FSTIYQELQSI 372 (377)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 108
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=368.90 Aligned_cols=259 Identities=24% Similarity=0.280 Sum_probs=195.2
Q ss_pred CCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
++|++.+.||+|+||.||+|++.+ ..||+|+..... ..+. +.+|+.++++++||||+++++++.+..
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~- 121 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKI----VRTEIGVLLRLSHPNIIKLKEIFETPT- 121 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------------CHHHHHCCCTTBCCEEEEEECSS-
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHH----HHHHHHHHHhCCCCCCcceeeeEecCC-
Confidence 569999999999999999999964 568888754221 1122 377999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 122 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~ 183 (349)
T 2w4o_A 122 -------------EISLVLELVTGGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYAT 183 (349)
T ss_dssp -------------EEEEEECCCCSCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESS
T ss_pred -------------eEEEEEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEec
Confidence 67999999999999999865 346999999999999999999999999999999999999975
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
. ...+.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 184 ~----~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ell 244 (349)
T 2w4o_A 184 P----APDAPLKIADFGLSKIVEHQVL-----------MKTVCGTPGYCAPEILRG----CAYGPEVDMWSVGIITYILL 244 (349)
T ss_dssp S----STTCCEEECCCC---------------------------CGGGSCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred C----CCCCCEEEccCccccccCcccc-----------cccccCCCCccCHHHhcC----CCCCcccchHHHHHHHHHHH
Confidence 2 1127899999999875543211 123468999999999875 46889999999999999999
Q ss_pred hCCCCCCCCCHHH-HHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 TLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 TG~~Pf~~~~~~e-l~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+|..||......+ +...+........... ....+.++.+|+.+||+.||++|||+
T Consensus 245 ~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~~~li~~~L~~dP~~Rpt~ 300 (349)
T 2w4o_A 245 CGFEPFYDERGDQFMFRRILNCEYYFISPW------------------------WDEVSLNAKDLVRKLIVLDPKKRLTT 300 (349)
T ss_dssp HSSCTTCCTTCHHHHHHHHHTTCCCCCTTT------------------------TTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred hCCCCCCCCcccHHHHHHHHhCCCccCCch------------------------hhhCCHHHHHHHHHHccCChhhCcCH
Confidence 9999997655443 4555544332211100 01345569999999999999999999
Q ss_pred HHHHHHHHhhcCCC
Q 001152 1119 GDLYEMFVARTSSS 1132 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ss 1132 (1137)
.|+++|+|+.....
T Consensus 301 ~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 301 FQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHSTTTTSTTC
T ss_pred HHHhcCcccCCCcc
Confidence 99999999986543
No 109
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.9e-38 Score=366.90 Aligned_cols=258 Identities=24% Similarity=0.283 Sum_probs=193.6
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+|++.+.||+|+||+||+|++. +..||+|+..... ... +. +.+|+.+++.++||||+++++++.+.
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~---~~----~~~E~~~l~~l~hpniv~~~~~~~~~ 88 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AID---EN----VQREIINHRSLRHPNIVRFKEVILTP 88 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TSC---HH----HHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--ccc---HH----HHHHHHHHHhCCCCCCCcEEEEEeeC
Confidence 4578999999999999999999985 5678888754321 111 22 37899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
. ..++||||+++|+|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 89 ~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill 149 (361)
T 3uc3_A 89 T--------------HLAIIMEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL 149 (361)
T ss_dssp S--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEE
T ss_pred C--------------EEEEEEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 5 67999999999999999876 2369999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+. .+.+||+|||+++...... ......||+.|+|||++.+. ...+.++|||||||++|+
T Consensus 150 ~~~~-----~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~e 210 (361)
T 3uc3_A 150 DGSP-----APRLKICDFGYSKSSVLHS-----------QPKSTVGTPAYIAPEVLLRQ---EYDGKIADVWSCGVTLYV 210 (361)
T ss_dssp CSSS-----SCCEEECCCCCC--------------------------CTTSCHHHHHCS---SCCHHHHHHHHHHHHHHH
T ss_pred cCCC-----CceEEEeecCccccccccC-----------CCCCCcCCCCcCChhhhcCC---CCCCCeeeeehhHHHHHH
Confidence 8662 1459999999986432211 11234699999999998752 233455999999999999
Q ss_pred HHhCCCCCCCCCH----HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1038 LLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~----~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
|++|+.||.+... ......+...... ++. ....++++.+|+.+||+.||.
T Consensus 211 ll~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~s~~~~~li~~~L~~dP~ 264 (361)
T 3uc3_A 211 MLVGAYPFEDPEEPRDYRKTIQRILSVKYS-IPD-------------------------DIRISPECCHLISRIFVADPA 264 (361)
T ss_dssp HHHSSCSCC----CCCHHHHHHHHHTTCCC-CCT-------------------------TSCCCHHHHHHHHHHSCSCTT
T ss_pred HHhCCCCCCCCccHHHHHHHHHHHhcCCCC-CCC-------------------------cCCCCHHHHHHHHHHccCChh
Confidence 9999999976433 2233333222110 000 013345699999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001152 1114 ERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~~~ 1130 (1137)
+|||+.|+++|+|+...
T Consensus 265 ~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 265 TRISIPEIKTHSWFLKN 281 (361)
T ss_dssp TSCCHHHHHTSHHHHTT
T ss_pred HCcCHHHHHhCcchhcC
Confidence 99999999999999654
No 110
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=7.7e-39 Score=379.72 Aligned_cols=267 Identities=23% Similarity=0.280 Sum_probs=211.2
Q ss_pred CCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.++||+|+||+||+|++.. ..+|+|+..... ...+.....+.+|+.++..++|||||++++++.+..
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-----MLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHH-----hhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 4679999999999999999999864 668888754221 111111123578999999999999999999998766
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..|+||||++||+|.+++.+. ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 148 --------------~~~lV~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~ 209 (437)
T 4aw2_A 148 --------------NLYLVMDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209 (437)
T ss_dssp --------------EEEEEECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc
Confidence 679999999999999999752 34699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~E 1037 (1137)
.+ +.+||+|||+++........ .....+||+.|+|||++.... ....++.++|||||||++||
T Consensus 210 ~~-------g~vkL~DFGla~~~~~~~~~---------~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~e 273 (437)
T 4aw2_A 210 MN-------GHIRLADFGSCLKLMEDGTV---------QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273 (437)
T ss_dssp TT-------SCEEECCCTTCEECCTTSCE---------ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEcchhhhhhcccCCCc---------ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHH
Confidence 87 78999999999765432211 112347999999999987311 12467899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE-- 1114 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~-- 1114 (1137)
|++|+.||.+.+..+....+.... ...++. .....++++.+||.+||..+|++
T Consensus 274 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~------------------------~~~~~s~~~~dLi~~lL~~~~~r~~ 329 (437)
T 4aw2_A 274 MLYGETPFYAESLVETYGKIMNHKERFQFPT------------------------QVTDVSENAKDLIRRLICSREHRLG 329 (437)
T ss_dssp HHHSSCTTCCSSHHHHHHHHHTHHHHCCCCS------------------------SCCCSCHHHHHHHHTTSSCGGGCTT
T ss_pred HHhCCCCCCCCChhHHHHhhhhccccccCCc------------------------ccccCCHHHHHHHHHHhcccccccC
Confidence 999999999988888777764311 001110 00134566999999999988888
Q ss_pred CCCHHHHHHHHHhhcC
Q 001152 1115 RPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~ 1130 (1137)
||+++|+++|+|+..-
T Consensus 330 r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 330 QNGIEDFKKHPFFSGI 345 (437)
T ss_dssp TTTTHHHHTSGGGTTC
T ss_pred CCCHHHHhCCCccCCC
Confidence 9999999999999753
No 111
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.3e-38 Score=351.65 Aligned_cols=263 Identities=22% Similarity=0.236 Sum_probs=201.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEecC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 877 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~~ 877 (1137)
..+|++.+.||+|+||+||+|.+. +..+|+|+..... ........ +.+|+.++..+ +||||+++++++.+.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~----~~~e~~~~~~l~~h~~iv~~~~~~~~~ 83 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL--AGSVDEQN----ALREVYAHAVLGQHSHVVRYFSAWAED 83 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCC--TTSHHHHH----HHHHHHHHHHSCSCTTBCCEEEEEEET
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccc--cccHHHHH----HHHHHHHHHHhCCCCCeeeeeeeeecC
Confidence 356999999999999999999985 6788898854332 22222333 37899999999 899999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+ ..++||||+++++|.+++...... ...+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 84 ~--------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~ 148 (289)
T 1x8b_A 84 D--------------HMLIQNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148 (289)
T ss_dssp T--------------EEEEEEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred C--------------eEEEEEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEE
Confidence 5 679999999999999999864332 2468999999999999999999999999999999999999
Q ss_pred ccccc------------cCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCch
Q 001152 958 DLERK------------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE 1025 (1137)
Q Consensus 958 d~~~~------------~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~k 1025 (1137)
+.+.. .......+||+|||.+....... ...||+.|+|||++.+ ...++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--------------~~~gt~~y~aPE~~~~---~~~~~~~ 211 (289)
T 1x8b_A 149 SRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ--------------VEEGDSRFLANEVLQE---NYTHLPK 211 (289)
T ss_dssp C--------------------CCCEEECCCTTCEETTCSC--------------CCCCCGGGCCHHHHTT---CCTTHHH
T ss_pred cCCCCCcccccccccccccCCceEEEEcccccccccCCcc--------------ccCCCccccChhHhcC---CCCCCch
Confidence 85420 00123579999999987654321 2358999999999875 2356789
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHH
Q 001152 1026 VDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFR 1105 (1137)
Q Consensus 1026 sDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~ 1105 (1137)
+|||||||++|+|++|..|+.... ....+..+..+.++. ..++++.+++.
T Consensus 212 ~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~ 261 (289)
T 1x8b_A 212 ADIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQ---------------------------VLSQEFTELLK 261 (289)
T ss_dssp HHHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSS---------------------------CCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCc---------------------------ccCHHHHHHHH
Confidence 999999999999999988775432 233444443332221 33456999999
Q ss_pred HhcccCCCCCCCHHHHHHHHHhhcCC
Q 001152 1106 RCTEENPTERPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1106 ~CL~~DP~~RPSa~EVL~~L~~~~~s 1131 (1137)
+||+.||.+|||+.|+++|+|+...+
T Consensus 262 ~~l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 262 VMIHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp HHTCSSGGGSCCHHHHHTCTTC----
T ss_pred HHhCCCcccCCCHHHHhhChHhhhhc
Confidence 99999999999999999999998643
No 112
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=357.05 Aligned_cols=262 Identities=22% Similarity=0.324 Sum_probs=185.2
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
.+.+|++.+.||+|+||.||+|++ .+..+|+|+..... ........++.+|+.++++++||||+++++++.+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 83 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA-----MYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS 83 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh-----hhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC
Confidence 467899999999999999999997 45789999864321 11112223458899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+ ..++||||+++++|.+++.. ....+++..++.++.||+.||+|||++||+||||||+||++
T Consensus 84 ~--------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili 145 (278)
T 3cok_A 84 N--------------YVYLVLEMCHNGEMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL 145 (278)
T ss_dssp S--------------EEEEEEECCTTEEHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE
T ss_pred C--------------eEEEEEecCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 5 67999999999999999875 23569999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||++......... .....||+.|+|||++.+ ..++.++||||||+++|+
T Consensus 146 ~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 204 (278)
T 3cok_A 146 TRN-------MNIKIADFGLATQLKMPHEK----------HYTLCGTPNYISPEIATR----SAHGLESDVWSLGCMFYT 204 (278)
T ss_dssp CTT-------CCEEECCCTTCEECC------------------------------------------CTHHHHHHHHHHH
T ss_pred cCC-------CCEEEEeecceeeccCCCCc----------ceeccCCCCcCCcchhcC----CCCCchhhHHHHHHHHHH
Confidence 877 78999999998765432111 113468999999999875 467899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
|++|..||......+....+..... .. ....+.++.+++.+||+.||.+|||
T Consensus 205 l~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~~---~~~~~~~~~~li~~~l~~dp~~Rps 256 (278)
T 3cok_A 205 LLIGRPPFDTDTVKNTLNKVVLADY-------------------------EM---PSFLSIEAKDLIHQLLRRNPADRLS 256 (278)
T ss_dssp HHHSSCSSCCCSCC-----CCSSCC-------------------------CC---CTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHhCCCCCCChhHHHHHHHHhhccc-------------------------CC---ccccCHHHHHHHHHHcccCHhhCCC
Confidence 9999999976543322221110000 00 0134456899999999999999999
Q ss_pred HHHHHHHHHhhcCCCC
Q 001152 1118 AGDLYEMFVARTSSSI 1133 (1137)
Q Consensus 1118 a~EVL~~L~~~~~ss~ 1133 (1137)
++++++|+|+......
T Consensus 257 ~~~~l~h~~~~~~~~~ 272 (278)
T 3cok_A 257 LSSVLDHPFMSRNSST 272 (278)
T ss_dssp HHHHTTSTTTC-----
T ss_pred HHHHhcCccccCCCCc
Confidence 9999999999865443
No 113
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.3e-38 Score=353.70 Aligned_cols=265 Identities=23% Similarity=0.328 Sum_probs=194.8
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+|++.+.||+|+||+||+|++ .+..+|+|+.... .. ...... .+..+...++.++||||+++++++.+.
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~-~~~~~~---~~~~~~~~~~~~~h~~iv~~~~~~~~~ 78 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT--VN-SQEQKR---LLMDLDISMRTVDCPFTVTFYGALFRE 78 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC-----C-HHHHHH---HHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecc--cC-cHHHHH---HHHHHHHHHHhCCCCeEEEEeeeeecc
Confidence 356899999999999999999998 4577888875422 11 222111 124455568888999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCeE
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENIL 956 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~-gIIHrDLKP~NIL 956 (1137)
+ ..++||||++ |+|.+++...... ...+++..++.|+.||+.||+|||++ ||+||||||+|||
T Consensus 79 ~--------------~~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil 142 (290)
T 3fme_A 79 G--------------DVWICMELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL 142 (290)
T ss_dssp S--------------SEEEEEECCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCE
T ss_pred C--------------CEEEEEehhc-cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEE
Confidence 5 5699999997 6998888764333 35799999999999999999999998 9999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||++........ .....||+.|+|||++........++.++|||||||++|
T Consensus 143 ~~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~ 204 (290)
T 3fme_A 143 INAL-------GQVKMCDFGISGYLVDDVA-----------KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 204 (290)
T ss_dssp ECTT-------CCEEBCCC--------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeecCCccccccccc-----------ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHH
Confidence 9877 7899999999876543221 113369999999999743223457889999999999999
Q ss_pred HHHhCCCCCCC-CCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1037 ELLTLQVPYMG-LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1037 ELLTG~~Pf~~-~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
+|++|..||.. .........+.....+..+. ...++++.+++.+||+.||.+|
T Consensus 205 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~~p~~R 258 (290)
T 3fme_A 205 ELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA--------------------------DKFSAEFVDFTSQCLKKNSKER 258 (290)
T ss_dssp HHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCT--------------------------TTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHCCCCccccCchHHHHHHHhccCCCCccc--------------------------ccCCHHHHHHHHHHhhcChhhC
Confidence 99999999975 33333333333322222110 1344569999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001152 1116 PTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~ 1130 (1137)
||++|+++|+|+...
T Consensus 259 pt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 259 PTYPELMQHPFFTLH 273 (290)
T ss_dssp CCHHHHTTSHHHHHH
T ss_pred cCHHHHHhCcccccC
Confidence 999999999999753
No 114
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.5e-38 Score=365.86 Aligned_cols=279 Identities=23% Similarity=0.310 Sum_probs=207.5
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
....+|++.+.||+|+||+||+|.+. +..+|+|+..... .....+ ++.+|+.++++++||||+++++++..
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~ 102 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRN----QIIRELQVLHECNSPYIVGFYGAFYS 102 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHH----HHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHH----HHHHHHHHHHHCCCCCEEEEeEEEEE
Confidence 34568999999999999999999996 5678888764332 222223 34899999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCe
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI 955 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~-gIIHrDLKP~NI 955 (1137)
.+ ..++||||+++++|.+++... ..+++..+..|+.||+.||+|||++ ||+||||||+||
T Consensus 103 ~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Ni 163 (360)
T 3eqc_A 103 DG--------------EISICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 163 (360)
T ss_dssp TT--------------EEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGE
T ss_pred CC--------------EEEEEEECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHE
Confidence 65 679999999999999999762 3689999999999999999999986 999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||++........ ....||+.|+|||++.+ ..++.++|||||||++
T Consensus 164 l~~~~-------~~~kl~Dfg~~~~~~~~~~------------~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 220 (360)
T 3eqc_A 164 LVNSR-------GEIKLCDFGVSGQLIDSMA------------NSFVGTRSYMSPERLQG----THYSVQSDIWSMGLSL 220 (360)
T ss_dssp EECTT-------CCEEECCCCCCHHHHHHC----------------CCCCTTCCHHHHTT----CCCSHHHHHHHHHHHH
T ss_pred EECCC-------CCEEEEECCCCcccccccc------------cCCCCCCCeECHHHHcC----CCCCchhhHHHHHHHH
Confidence 99987 7899999999875533211 13468999999999875 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCC---CCCchhHHhhhccccc----------------ccccccCCCCCCchhhhhh
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGK---RPRLTDELEALGSCHE----------------HEVAQSGSGFEKPEAELET 1096 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~---~p~l~~~l~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 1096 (1137)
|+|++|..||......++...+.... ....+........... ........ ........
T Consensus 221 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 297 (360)
T 3eqc_A 221 VEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP---PKLPSGVF 297 (360)
T ss_dssp HHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCC---CCCCTTTS
T ss_pred HHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCC---CCCCcccc
Confidence 99999999998877666544331110 0000000000000000 00000000 00011135
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1097 LSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1097 ~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
++++.+|+.+||+.||.+|||++|+++|+|+..
T Consensus 298 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 330 (360)
T 3eqc_A 298 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330 (360)
T ss_dssp CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred cHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence 667999999999999999999999999999975
No 115
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-38 Score=369.80 Aligned_cols=294 Identities=18% Similarity=0.177 Sum_probs=207.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||+||+|.+. +..||+|+....... . .+|+.+|+.++|||||++++++....
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~--------~----~~E~~il~~l~hpnIv~l~~~~~~~~ 73 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY--------K----NRELDIMKVLDHVNIIKLVDYFYTTG 73 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS--------C----CHHHHHHTTCCCTTBCCEEEEEEEC-
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch--------H----HHHHHHHHHcCCCCccchhheeeecC
Confidence 467999999999999999999984 577899875432111 1 35999999999999999999986532
Q ss_pred CCCCC-----------CC-------------CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHH
Q 001152 879 WLPSA-----------DG-------------NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVA 934 (1137)
Q Consensus 879 ~~~~~-----------~g-------------~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa 934 (1137)
..... .+ .........++||||++ ++|.+.+...... ...+++..++.|+.||+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 74 DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLF 151 (383)
T ss_dssp ------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHH
Confidence 10000 00 00012235799999998 7999888764433 35799999999999999
Q ss_pred HHHHHHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhc
Q 001152 935 AALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR 1014 (1137)
Q Consensus 935 ~gL~yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 1014 (1137)
.||+|||++||+||||||+|||++.+. +.+||+|||+++....... .....||+.|+|||++.
T Consensus 152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~------~~~kl~Dfg~a~~~~~~~~-----------~~~~~~t~~y~aPE~~~ 214 (383)
T 3eb0_A 152 RAVGFIHSLGICHRDIKPQNLLVNSKD------NTLKLCDFGSAKKLIPSEP-----------SVAYICSRFYRAPELML 214 (383)
T ss_dssp HHHHHHHTTTEECSCCCGGGEEEETTT------TEEEECCCTTCEECCTTSC-----------CCCCCCCSSCCCHHHHT
T ss_pred HHHHHHHHCcCccCccCHHHEEEcCCC------CcEEEEECCCCcccCCCCC-----------CcCcccCCCccCHHHhc
Confidence 999999999999999999999997431 7899999999976543221 12346899999999987
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCchhHHhhhcc-cccccccccCCCCCCchh
Q 001152 1015 AMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGS-CHEHEVAQSGSGFEKPEA 1092 (1137)
Q Consensus 1015 ~~~~~~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g-~~p~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 1092 (1137)
+ ...++.++|||||||++|+|++|+.||.+....+....+... ..+... .+..... .............-....
T Consensus 215 ~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (383)
T 3eb0_A 215 G---ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKE-QMIRMNPHYTEVRFPTLKAKDWRKIL 290 (383)
T ss_dssp T---CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH-HHHHHCTTC--CCCCCCCCCCHHHHS
T ss_pred C---CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH-HHHHhCcccccccCCccCcccHHhhC
Confidence 5 245889999999999999999999999998877766665332 222211 1111100 000000000000000001
Q ss_pred hhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1093 ELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1093 ~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
....++++.+|+.+||+.||.+|||+.|+++|+|+..
T Consensus 291 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 291 PEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327 (383)
T ss_dssp CTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence 1245677999999999999999999999999999963
No 116
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-38 Score=377.96 Aligned_cols=298 Identities=18% Similarity=0.183 Sum_probs=194.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||+||+|.+. +..||+|+.. .........+. +.+|+.+|+.++|||||++++++.....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~--~~~~~~~~~~~----~~~E~~~l~~l~h~niv~l~~~~~~~~~ 126 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL--RVFEDLIDCKR----ILREIAILNRLNHDHVVKVLDIVIPKDV 126 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEEC--STTSSHHHHHH----HHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEec--hhhcCHHHHHH----HHHHHHHHHhCCCCCCCceEEEEecCCc
Confidence 67999999999999999999875 4678888643 22223333333 4899999999999999999999865431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
......|+||||+. ++|.++++. ...+++..++.|+.||+.||+|||++||+||||||+|||++.
T Consensus 127 ---------~~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~ 191 (458)
T 3rp9_A 127 ---------EKFDELYVVLEIAD-SDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQ 191 (458)
T ss_dssp ---------TTCCCEEEEECCCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred ---------ccCceEEEEEeccc-cchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECC
Confidence 01226899999985 899999875 356999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccc-----------------cCCCCCCCcccCCCcccchhhhccccCCCCC
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-----------------HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1022 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~-----------------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1022 (1137)
+ +.+||+|||+++............ ..........+||+.|+|||++.. ...+
T Consensus 192 ~-------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~ 261 (458)
T 3rp9_A 192 D-------CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL---QENY 261 (458)
T ss_dssp T-------CCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTT---CCCC
T ss_pred C-------CCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhC---CCCC
Confidence 7 789999999998654322110000 000011234578999999998753 2568
Q ss_pred CchhhHHHHHHHHHHHHh-----------CCCCCCCCCH--------------------HHHHHHHHcCCCCCchhHHhh
Q 001152 1023 GLEVDIWSYGCLLLELLT-----------LQVPYMGLSE--------------------LEIHDLIQMGKRPRLTDELEA 1071 (1137)
Q Consensus 1023 s~ksDVWSLGviL~ELLT-----------G~~Pf~~~~~--------------------~el~~~I~~g~~p~l~~~l~~ 1071 (1137)
+.++|||||||++|||++ |.++|.+... .+....+...........+..
T Consensus 262 ~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~ 341 (458)
T 3rp9_A 262 TEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEA 341 (458)
T ss_dssp CTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHT
T ss_pred CcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhh
Confidence 999999999999999999 6777765431 111222211110011111111
Q ss_pred hcccccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1072 LGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1072 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
........... ..............++++.+||.+||+.||.+|||++|+++|+|+..-
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 342 LEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp SSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred cCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 00000000000 001111111223456789999999999999999999999999999754
No 117
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-38 Score=362.74 Aligned_cols=257 Identities=19% Similarity=0.311 Sum_probs=201.6
Q ss_pred CCCCceEeeeecccCceEEEEEEECC--ccE----EEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeee
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGS--ADA----AAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 873 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~v----AVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~ 873 (1137)
...+|++.+.||+|+||+||+|++.. ..+ |+|.. .... .... ..++.+|+.++++++||||++++++
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~--~~~~-~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~ 85 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REAT-SPKA----NKEILDEAYVMASVDNPHVCRLLGI 85 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------C----HHHHHHHHHHHHHCCBTTBCCEEEE
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeec--cccc-CHHH----HHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 34679999999999999999999843 333 44432 2111 1112 2334889999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCC
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 953 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~ 953 (1137)
+.+. ..++||||+++|+|.+++... ...+++..++.|+.||+.||+|||++||+||||||+
T Consensus 86 ~~~~---------------~~~~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~ 146 (327)
T 3poz_A 86 CLTS---------------TVQLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAAR 146 (327)
T ss_dssp EESS---------------SEEEEEECCTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred EecC---------------CeEEEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChh
Confidence 9864 348999999999999999762 346999999999999999999999999999999999
Q ss_pred CeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001152 954 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1033 (1137)
Q Consensus 954 NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1033 (1137)
|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|||||||
T Consensus 147 NIll~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~ 207 (327)
T 3poz_A 147 NVLVKTP-------QHVKITDFGLAKLLGAEEKE--------YHAEGGKVPIKWMALESILH----RIYTHQSDVWSYGV 207 (327)
T ss_dssp GEEEEET-------TEEEECCTTHHHHHTTTCC---------------CCCGGGSCHHHHHH----CCCCHHHHHHHHHH
T ss_pred eEEECCC-------CCEEEccCcceeEccCCccc--------ccccCCCccccccChHHhcc----CCCCchhhhhhhHH
Confidence 9999987 78999999999765432211 11112357889999999986 56889999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1034 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1034 iL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
++|||++ |..||.+....++...+..+.....+. .++.++.+++.+||+.||
T Consensus 208 il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p 260 (327)
T 3poz_A 208 TVWELMTFGSKPYDGIPASEISSILEKGERLPQPP---------------------------ICTIDVYMIMVKCWMIDA 260 (327)
T ss_dssp HHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TBCHHHHHHHHHHTCSCG
T ss_pred HHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCCh
Confidence 9999999 999999887777776666554332221 334569999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001152 1113 TERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~ 1128 (1137)
.+|||+.|+++++...
T Consensus 261 ~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 261 DSRPKFRELIIEFSKM 276 (327)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHH
Confidence 9999999999998764
No 118
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.5e-38 Score=352.92 Aligned_cols=256 Identities=21% Similarity=0.333 Sum_probs=195.6
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~-----~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
...+|++.+.||+|+||.||+|.+.. ..+|+|+ .... ......+ ++.+|+.++++++||||+++++++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~--~~~~-~~~~~~~----~~~~e~~~l~~l~h~~iv~~~~~~ 85 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKT--CKNC-TSDSVRE----KFLQEALTMRQFDHPHIVKLIGVI 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEE--CTTT-TSHHHHH----HHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEe--cccc-CCHHHHH----HHHHHHHHHHhCCCCccceEEEEE
Confidence 34679999999999999999999843 2355554 3322 1222223 348899999999999999999997
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+. ..++||||+++++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|
T Consensus 86 ~~~---------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N 146 (281)
T 1mp8_A 86 TEN---------------PVWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 146 (281)
T ss_dssp CSS---------------SCEEEEECCTTEEHHHHHHH----TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred ccC---------------ccEEEEecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHH
Confidence 532 35899999999999999975 23469999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 147 il~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~ 206 (281)
T 1mp8_A 147 VLVSSN-------DCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGVC 206 (281)
T ss_dssp EEEEET-------TEEEECC----------------------------CCGGGCCHHHHHH----CCCSHHHHHHHHHHH
T ss_pred EEECCC-------CCEEECccccccccCccccc---------ccccCCCcccccChhhccc----CCCCCccCchHHHHH
Confidence 999987 78999999999765432211 1112357789999999975 468899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|+|++ |..||.+....+....+..+..+..+. .+++.+.+++.+||+.||.
T Consensus 207 l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~ 259 (281)
T 1mp8_A 207 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------------------NCPPTLYSLMTKCWAYDPS 259 (281)
T ss_dssp HHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChh
Confidence 999997 999999877777777776554332221 3455699999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001152 1114 ERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~ 1128 (1137)
+|||+.|+++++...
T Consensus 260 ~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 260 RRPRFTELKAQLSTI 274 (281)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999998764
No 119
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.5e-38 Score=361.22 Aligned_cols=258 Identities=22% Similarity=0.306 Sum_probs=202.9
Q ss_pred CCCCceEeeeecccCceEEEEEEECC--cc----EEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeee
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGS--AD----AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 873 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~----vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~ 873 (1137)
...+|++.+.||+|+||+||+|.+.. .. +|+|+..... .....+. +.+|+.++++++||||++++++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~---~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~ 83 (325)
T 3kex_A 11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQA----VTDHMLAIGSLDHAHIVRLLGL 83 (325)
T ss_dssp CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT---SCSCBCS----CCHHHHHHHTCCCTTBCCEEEE
T ss_pred CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc---cHHHHHH----HHHHHHHHhcCCCCCcCeEEEE
Confidence 45689999999999999999999843 33 5555432111 1111222 3679999999999999999998
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCC
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 953 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~ 953 (1137)
+.+. ..++||||+++|+|.+++... ...+++..+..|+.||+.||+|||++||+||||||+
T Consensus 84 ~~~~---------------~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~ 144 (325)
T 3kex_A 84 CPGS---------------SLQLVTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAAR 144 (325)
T ss_dssp ECBS---------------SEEEEEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSST
T ss_pred EcCC---------------ccEEEEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchh
Confidence 8643 468999999999999998752 246899999999999999999999999999999999
Q ss_pred CeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001152 954 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1033 (1137)
Q Consensus 954 NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1033 (1137)
|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|||||||
T Consensus 145 Nil~~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~ 205 (325)
T 3kex_A 145 NVLLKSP-------SQVQVADFGVADLLPPDDKQ--------LLYSEAKTPIKWMALESIHF----GKYTHQSDVWSYGV 205 (325)
T ss_dssp TEEESSS-------SCEEECSCSGGGGSCCCTTC--------CC-----CCTTTSCHHHHHH----CCCCHHHHHHHHHH
T ss_pred eEEECCC-------CeEEECCCCcccccCccccc--------ccccCCCCcccccChHHhcc----CCCChhhHhHHhHH
Confidence 9999877 78999999999865432211 11123468889999999976 46889999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1034 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1034 iL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
++|+|++ |..||.+....++...+..+..+..+. .++.++.+++.+||+.||
T Consensus 206 ~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~dp 258 (325)
T 3kex_A 206 TVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQ---------------------------ICTIDVYMVMVKCWMIDE 258 (325)
T ss_dssp HHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCT---------------------------TBCTTTTHHHHHHTCSCT
T ss_pred HHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCC---------------------------cCcHHHHHHHHHHcCCCh
Confidence 9999999 999999877777777776654433222 122337889999999999
Q ss_pred CCCCCHHHHHHHHHhhc
Q 001152 1113 TERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~ 1129 (1137)
.+|||+.|+++++....
T Consensus 259 ~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 259 NIRPTFKELANEFTRMA 275 (325)
T ss_dssp TTSCCHHHHHHHHHHHT
T ss_pred hhCcCHHHHHHHHHHHH
Confidence 99999999999987653
No 120
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-38 Score=355.89 Aligned_cols=276 Identities=22% Similarity=0.289 Sum_probs=198.8
Q ss_pred CCCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~------~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
-.+|++.+.||+|+||+||+|++ .+..||+|+.... .....+. +.+|+.++++++||||+++++++
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~ 80 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRD----FEREIEILKSLQHDNIVKYKGVC 80 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHH----HHHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHH----HHHHHHHHHhCCCCCEeeEEEEE
Confidence 46799999999999999999985 3567888875321 2333333 48899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
...+. ...++||||+++++|.+++... ...+++..+..|+.||+.||+|||++||+||||||+|
T Consensus 81 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N 144 (295)
T 3ugc_A 81 YSAGR------------RNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 144 (295)
T ss_dssp CHHHH------------TSCEEEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred ecCCC------------CceEEEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhh
Confidence 65321 1469999999999999999762 2359999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||++.......... .......+|..|+|||++.+ ..++.++||||||++
T Consensus 145 il~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~ 206 (295)
T 3ugc_A 145 ILVENE-------NRVKIGDFGLTKVLPQDKEFF-------KVKEPGESPIFWYAPESLTE----SKFSVASDVWSFGVV 206 (295)
T ss_dssp EEEEET-------TEEEECCCCSCC--------------------CTTCGGGGCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CeEEEccCcccccccCCccee-------eeccCCCCccceeCcHHhcC----CCCChHHHHHHHHHH
Confidence 999987 789999999997654322110 11123357778999999976 468899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|+|++|..||.... .+....+.... ......... ...... ..... ....+++++.+++.+||+.||.+
T Consensus 207 l~~l~~g~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~----~~~~~~-~~~~~---~~~~~~~~l~~li~~~l~~dp~~ 275 (295)
T 3ugc_A 207 LYELFTYIEKSKSPP-AEFMRMIGNDK--QGQMIVFHL----IELLKN-NGRLP---RPDGCPDEIYMIMTECWNNNVNQ 275 (295)
T ss_dssp HHHHHHTTCTTCSHH-HHHHHHHCTTC--CTHHHHHHH----HHHHHT-TCCCC---CCTTCCHHHHHHHHHHSCSSGGG
T ss_pred HHHHHhcccccCCCh-HHHHhhhcCcc--ccchhHHHH----HHHHhc-cCcCC---CCcCcCHHHHHHHHHHcCCChhh
Confidence 999999999986532 22222221111 100000000 000000 00000 01145677999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001152 1115 RPTAGDLYEMFVART 1129 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~ 1129 (1137)
|||+.|+++.+....
T Consensus 276 Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 276 RPSFRDLALRVDQIR 290 (295)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999987654
No 121
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1e-38 Score=366.19 Aligned_cols=263 Identities=23% Similarity=0.358 Sum_probs=204.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 872 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg 872 (1137)
..+|++.+.||+|+||.||+|++. +..||||+.... ......+. +.+|+++++++ +|||||++++
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRA----LMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc---CCHHHHHH----HHHHHHHHHhhcCCcceeeeee
Confidence 467999999999999999999852 256888875322 12333333 48999999999 6999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcC-----------------------------------
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG----------------------------------- 917 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~----------------------------------- 917 (1137)
++.+.+. ..++||||+++|+|.++++......
T Consensus 94 ~~~~~~~-------------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (359)
T 3vhe_A 94 ACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQ 160 (359)
T ss_dssp EECSTTS-------------CCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------
T ss_pred eeecCCC-------------ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccc
Confidence 9876441 3699999999999999997632100
Q ss_pred --------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEeccccccCCCCCeEE
Q 001152 918 --------------------------EKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVK 971 (1137)
Q Consensus 918 --------------------------~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vK 971 (1137)
...+++..++.|+.||+.||+|||++||+||||||+|||++.+ +.+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~-------~~~k 233 (359)
T 3vhe_A 161 SSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-------NVVK 233 (359)
T ss_dssp -----------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG-------GCEE
T ss_pred cccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC-------CcEE
Confidence 1228999999999999999999999999999999999999987 7899
Q ss_pred EeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCH
Q 001152 972 LCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSE 1050 (1137)
Q Consensus 972 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~ 1050 (1137)
|+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||++ |..||.+...
T Consensus 234 l~Dfg~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 301 (359)
T 3vhe_A 234 ICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 301 (359)
T ss_dssp ECCCGGGSCTTSCTTC--------EEC--CEECGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred EEeccceeeecccccc--------hhccccCCCceeEChhhhcC----CCCCchhhhhhHHHHHHHHHhcCCCCCCccch
Confidence 9999999765432211 01123468889999999876 568899999999999999998 9999987553
Q ss_pred -HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1051 -LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1051 -~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
..+...+..+..+..+. ..++++.+++.+||+.||.+|||+.||++|+....
T Consensus 302 ~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 302 DEEFCRRLKEGTRMRAPD---------------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp SHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 33444444433322221 23456999999999999999999999999997653
No 122
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.2e-38 Score=360.51 Aligned_cols=267 Identities=20% Similarity=0.318 Sum_probs=193.2
Q ss_pred CCCceEeeeecccCceEEEEEEECCc-----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGSA-----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~~-----~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
..+|++.+.||+|+||+||+|++... .||+|+.... .......+. +.+|+.++++++||||+++++++.
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~ 95 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD--IIASSDIEE----FLREAACMKEFDHPHVAKLVGVSL 95 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHH----HHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccc--ccCHHHHHH----HHHHHHHHHHCCCCceehhhceee
Confidence 46799999999999999999997543 5788874322 212233333 489999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
..... ......++||||+++++|.+++...... ....+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 96 ~~~~~--------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~N 167 (323)
T 3qup_A 96 RSRAK--------GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN 167 (323)
T ss_dssp CC---------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred ccccc--------cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcce
Confidence 65421 0112359999999999999999764321 22369999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 168 Ili~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 228 (323)
T 3qup_A 168 CMLAED-------MTVCVADFGLSRKIYSGDYY--------RQGCASKLPVKWLALESLAD----NLYTVHSDVWAFGVT 228 (323)
T ss_dssp EEECTT-------SCEEECCCCC-------------------------CCGGGCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEeeccccccccccccc--------cccccccCcccccCchhhcC----CCCCCccchhhHHHH
Confidence 999877 78999999999765432211 11113357789999999876 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|+|++ |..||.+....++...+..+..+..+. ..++++.+++.+||+.||.
T Consensus 229 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 281 (323)
T 3qup_A 229 MWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPP---------------------------ECMEEVYDLMYQCWSADPK 281 (323)
T ss_dssp HHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSGG
T ss_pred HHHHHhCCCCCccccChHHHHHHHhcCCCCCCCC---------------------------ccCHHHHHHHHHHccCChh
Confidence 999999 999999887777777766554332221 3345699999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 001152 1114 ERPTAGDLYEMFVA 1127 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~ 1127 (1137)
+|||+.++++.+..
T Consensus 282 ~Rps~~~l~~~l~~ 295 (323)
T 3qup_A 282 QRPSFTCLRMELEN 295 (323)
T ss_dssp GSCCHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHH
Confidence 99996555554443
No 123
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=374.38 Aligned_cols=267 Identities=24% Similarity=0.255 Sum_probs=211.2
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+|++.+.||+|+||.||+|++. +..||+|+..... ...+.....+.+|+.++..++||||+++++++.+.
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~-----~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD-----MLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 3568999999999999999999985 5778999854221 11111123458899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+ ..|+||||++||+|.+++.+. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 134 ~--------------~~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl 195 (412)
T 2vd5_A 134 N--------------YLYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195 (412)
T ss_dssp S--------------EEEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred C--------------EEEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee
Confidence 5 679999999999999999762 2369999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc---CCCCCCchhhHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~s~ksDVWSLGvi 1034 (1137)
+.+ +.+||+|||+++........ .....+||+.|+|||++.... ....++.++|||||||+
T Consensus 196 d~~-------g~vkL~DFGla~~~~~~~~~---------~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvi 259 (412)
T 2vd5_A 196 DRC-------GHIRLADFGSCLKLRADGTV---------RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVF 259 (412)
T ss_dssp CTT-------SCEEECCCTTCEECCTTSCE---------ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHH
T ss_pred cCC-------CCEEEeechhheeccCCCcc---------ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHH
Confidence 987 78999999999765432211 012347999999999987311 12457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|||++|+.||.+.+..+....+.... ...++ ......++++++||.+||. +|.
T Consensus 260 lyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p------------------------~~~~~~s~~~~dli~~lL~-~p~ 314 (412)
T 2vd5_A 260 AYEMFYGQTPFYADSTAETYGKIVHYKEHLSLP------------------------LVDEGVPEEARDFIQRLLC-PPE 314 (412)
T ss_dssp HHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----------------------------CCCHHHHHHHHTTSS-CGG
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCC------------------------ccccCCCHHHHHHHHHHcC-Chh
Confidence 999999999999988888777765321 00000 0011345679999999999 999
Q ss_pred CC---CCHHHHHHHHHhhcC
Q 001152 1114 ER---PTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1114 ~R---PSa~EVL~~L~~~~~ 1130 (1137)
+| |+++||++|+||..-
T Consensus 315 ~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 315 TRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp GCTTTTTHHHHHTSGGGTTC
T ss_pred hcCCCCCHHHHhcCCCcCCC
Confidence 98 699999999999754
No 124
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.7e-38 Score=354.83 Aligned_cols=259 Identities=24% Similarity=0.242 Sum_probs=208.2
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|++. +..+|+|+...... ...+ .+.+|+.+++.++||||+++++++.+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDS----SLENEIAVLKKIKHENIVTLEDIYESTT- 79 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------------HHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc----cchH----HHHHHHHHHHhCCCCCeeehhhhcccCC-
Confidence 46999999999999999999985 57789998653221 1112 2478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||++..
T Consensus 80 -------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~ 141 (304)
T 2jam_A 80 -------------HYYLVMQLVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLT 141 (304)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESS
T ss_pred -------------EEEEEEEcCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEec
Confidence 679999999999999998762 36899999999999999999999999999999999999942
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ ...+.+||+|||++....... .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 142 ~----~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 201 (304)
T 2jam_A 142 P----EENSKIMITDFGLSKMEQNGI------------MSTACGTPGYVAPEVLAQ----KPYSKAVDCWSIGVITYILL 201 (304)
T ss_dssp S----STTCCEEBCSCSTTCCCCCBT------------THHHHSCCCBCCTTTBSS----CSCCHHHHHHHHHHHHHHHH
T ss_pred C----CCCCCEEEccCCcceecCCCc------------cccccCCCCccChHHhcc----CCCCchhhHHHHHHHHHHHH
Confidence 1 112789999999886533211 113468999999999875 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||......++...+..+........ ....++++.+++.+||+.||.+|||++
T Consensus 202 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ 257 (304)
T 2jam_A 202 CGYPPFYEETESKLFEKIKEGYYEFESPF------------------------WDDISESAKDFICHLLEKDPNERYTCE 257 (304)
T ss_dssp HSSCTTTTSCHHHHHHHHHHCCCCCCTTT------------------------TTTSCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHcCCCCCCccc------------------------cccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 99999998888877777766543211100 013456699999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001152 1120 DLYEMFVARTSS 1131 (1137)
Q Consensus 1120 EVL~~L~~~~~s 1131 (1137)
|+++|+|+....
T Consensus 258 ~~l~h~~~~~~~ 269 (304)
T 2jam_A 258 KALSHPWIDGNT 269 (304)
T ss_dssp HHHTSHHHHSSC
T ss_pred HHhcCccccCCC
Confidence 999999998654
No 125
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.2e-38 Score=355.12 Aligned_cols=256 Identities=28% Similarity=0.413 Sum_probs=210.9
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
-..|++.+.||+|+||.||+|.+. +..||+|+....... ...+. +.+|+.+++.++||||+++++++....
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~ 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE---DEIED----IQQEITVLSQCDSPYVTKYYGSYLKDT 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS---TTHHH----HHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH---HHHHH----HHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 356999999999999999999874 577899986544321 12223 478999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 94 --------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~ 153 (303)
T 3a7i_A 94 --------------KLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 153 (303)
T ss_dssp --------------EEEEEEECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------eEEEEEEeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC
Confidence 67999999999999999854 4699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 154 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 212 (303)
T 3a7i_A 154 EH-------GEVKLADFGVAGQLTDTQI----------KRNTFVGTPFWMAPEVIKQ----SAYDSKADIWSLGITAIEL 212 (303)
T ss_dssp TT-------SCEEECCCTTCEECBTTBC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccceecCcccc----------ccCccCCCcCccCHHHHhc----CCCCchhhhHHHHHHHHHH
Confidence 77 7899999999876543211 1123468999999999875 4678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||......+....+.....+.++. ..+..+.+++.+||+.||.+|||+
T Consensus 213 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~~Rps~ 265 (303)
T 3a7i_A 213 ARGEPPHSELHPMKVLFLIPKNNPPTLEG---------------------------NYSKPLKEFVEACLNKEPSFRPTA 265 (303)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHSCCCCCCS---------------------------SCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred ccCCCCCCCcCHHHHHHHhhcCCCCCCcc---------------------------ccCHHHHHHHHHHcCCChhhCcCH
Confidence 99999999888777766665544332221 234559999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001152 1119 GDLYEMFVARTSS 1131 (1137)
Q Consensus 1119 ~EVL~~L~~~~~s 1131 (1137)
.|+++|+|+....
T Consensus 266 ~~ll~~~~~~~~~ 278 (303)
T 3a7i_A 266 KELLKHKFILRNA 278 (303)
T ss_dssp HHHTTCHHHHHHC
T ss_pred HHHhhChhhhcCC
Confidence 9999999997543
No 126
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.4e-38 Score=360.14 Aligned_cols=261 Identities=21% Similarity=0.288 Sum_probs=212.3
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 797 DPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 797 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
++....+|++.+.||+|+||.||+|.+. +..+|+|+...... ......+. +.+|+.+++.++||||+++++++
T Consensus 36 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~ 110 (335)
T 2owb_A 36 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREK----MSMEISIHRSLAHQHVVGFHGFF 110 (335)
T ss_dssp ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHH----HHHHHHHHHTCCCTTBCCEEEEE
T ss_pred CcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh-cCHHHHHH----HHHHHHHHHhCCCCCCCeEEEEE
Confidence 3445678999999999999999999985 46788887643322 12233333 48899999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+.+ ..++||||+++++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 111 ~~~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N 171 (335)
T 2owb_A 111 EDND--------------FVFVVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN 171 (335)
T ss_dssp ECSS--------------EEEEEECCCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred ecCC--------------eEEEEEecCCCCCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchh
Confidence 8765 67999999999999999876 2468999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 172 Il~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~i 230 (335)
T 2owb_A 172 LFLNED-------LEVKIGDFGLATKVEYDGE----------RKKVLCGTPNYIAPEVLSK----KGHSFEVDVWSIGCI 230 (335)
T ss_dssp EEECTT-------CCEEECCCTTCEECCSTTC----------CBCCCCSCCSSCCHHHHHT----SCBCTHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEeeccCceecccCcc----------cccccCCCccccCHHHhcc----CCCCchhhHHHHHHH
Confidence 999977 7899999999876542211 1123468999999999875 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|+|++|+.||......+....+...... ++. ..++.+.+|+.+||+.||.+
T Consensus 231 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~li~~~l~~dp~~ 282 (335)
T 2owb_A 231 MYTLLVGKPPFETSCLKETYLRIKKNEYS-IPK---------------------------HINPVAASLIQKMLQTDPTA 282 (335)
T ss_dssp HHHHHHSSCTTCCSSHHHHHHHHHHTCCC-CCT---------------------------TSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHHCcCCCCCCCHHHHHHHHhcCCCC-CCc---------------------------cCCHHHHHHHHHHccCChhH
Confidence 99999999999987777666665443321 110 23445899999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001152 1115 RPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~ 1130 (1137)
|||++|+++|+|+...
T Consensus 283 Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 283 RPTINELLNDEFFTSG 298 (335)
T ss_dssp SCCGGGGGGSHHHHTS
T ss_pred CcCHHHHhcCccccCC
Confidence 9999999999999754
No 127
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=356.50 Aligned_cols=251 Identities=25% Similarity=0.247 Sum_probs=195.2
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~~~ 878 (1137)
.+|++.++||+|+||+||+|++. +..||||+... ........... ..|+..+.++ +||||+++++++.+..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~----~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMS--PFRGPKDRARK----LAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESS--SCCSHHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecc--cccChHHHHHH----HHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 56999999999999999999985 57788887432 22223332222 5566666555 8999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+ +++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 131 --------------~~~lv~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~ 191 (311)
T 3p1a_A 131 --------------ILYLQTELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG 191 (311)
T ss_dssp --------------EEEEEEECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC
Confidence 679999999 68999988762 24699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|||
T Consensus 192 ~~-------~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~el 248 (311)
T 3p1a_A 192 PR-------GRCKLGDFGLLVELGTAGA-----------GEVQEGDPRYMAPELLQG-----SYGTAADVFSLGLTILEV 248 (311)
T ss_dssp GG-------GCEEECCCTTCEECC-----------------CCCCCGGGCCGGGGGT-----CCSTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccceeeeecccCCC-----------CcccCCCccccCHhHhcC-----CCCchhhHHHHHHHHHHH
Confidence 88 7899999999876543221 123469999999999864 578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..|+.+.. ....+..+.. +.. .....++++.+++.+||+.||++|||+
T Consensus 249 ~~g~~~~~~~~---~~~~~~~~~~---~~~-----------------------~~~~~~~~l~~li~~~L~~dP~~Rpt~ 299 (311)
T 3p1a_A 249 ACNMELPHGGE---GWQQLRQGYL---PPE-----------------------FTAGLSSELRSVLVMMLEPDPKLRATA 299 (311)
T ss_dssp HHTCCCCSSHH---HHHHHTTTCC---CHH-----------------------HHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HhCCCCCCCcc---HHHHHhccCC---Ccc-----------------------cccCCCHHHHHHHHHHcCCChhhCcCH
Confidence 99977765422 2222222211 111 111455679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001152 1119 GDLYEMFVART 1129 (1137)
Q Consensus 1119 ~EVL~~L~~~~ 1129 (1137)
+|+++|+|++.
T Consensus 300 ~ell~hp~~~~ 310 (311)
T 3p1a_A 300 EALLALPVLRQ 310 (311)
T ss_dssp HHHHTSGGGSC
T ss_pred HHHHhCccccC
Confidence 99999999975
No 128
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.1e-38 Score=363.45 Aligned_cols=285 Identities=17% Similarity=0.209 Sum_probs=205.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||.||+|.+. +..||+|+.... .......+. +.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~ 97 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP--FQNQTHAKR----AYRELVLMKCVNHKNIIGLLNVFTPQK 97 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECT--TSSHHHHHH----HHHHHHHHHHCCCTTBCCEEEEECSCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccc--cCChHHHHH----HHHHHHHHHhcCCCCccceEEeecccc
Confidence 468999999999999999999985 567888875432 222333333 488999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
.. ......++||||++ ++|.+++.. .+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 98 ~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~ 161 (371)
T 2xrw_A 98 SL--------EEFQDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 161 (371)
T ss_dssp ST--------TTCCEEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred cc--------ccccceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc
Confidence 21 11236799999997 688888753 489999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 162 ~~-------~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el 219 (371)
T 2xrw_A 162 SD-------CTLKILDFGLARTAGTSFM-----------MTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGEM 219 (371)
T ss_dssp TT-------SCEEECCCCC---------------------------CTTCCHHHHTT----CCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEEeecccccccccc-----------cCCceecCCccCHHHhcC----CCCCchHhHHHHHHHHHHH
Confidence 87 7899999999975543211 123468999999999975 4688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhccc-----------ccccccccCCC---CCCchhhhhhHHHHHHHH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-----------HEHEVAQSGSG---FEKPEAELETLSFLVDVF 1104 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~L~dLl 1104 (1137)
++|..||.+.+..+....+........+..+...... ........... ..........++++.+|+
T Consensus 220 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 299 (371)
T 2xrw_A 220 IKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 299 (371)
T ss_dssp HHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHH
Confidence 9999999998887777777554433322221111000 00000000000 000111223467899999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1105 RRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1105 ~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
.+||+.||.+|||++|+++|+|+..
T Consensus 300 ~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 300 SKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp HHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred HHHCcCChhhCCCHHHHhCCcchhh
Confidence 9999999999999999999999974
No 129
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.7e-38 Score=349.66 Aligned_cols=273 Identities=25% Similarity=0.352 Sum_probs=218.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeeE
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 874 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~-~~~~~~e~~~~~~lrEi~iL~~L~-HpNIVkllg~~ 874 (1137)
....+|++.+.||+|+||.||+|.+. +..||+|+....... ....+.+.....+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34678999999999999999999985 467899986544321 223344444556789999999996 99999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.... ..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|
T Consensus 94 ~~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N 154 (298)
T 1phk_A 94 ETNT--------------FFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN 154 (298)
T ss_dssp ECSS--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred ccCC--------------eEEEEEeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcce
Confidence 8665 67999999999999999976 2468999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc--CCCCCCchhhHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH--KPNLYGLEVDIWSYG 1032 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~~s~ksDVWSLG 1032 (1137)
|+++.+ +.+||+|||++........ .....||+.|+|||++.+.. ....++.++||||||
T Consensus 155 il~~~~-------~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG 216 (298)
T 1phk_A 155 ILLDDD-------MNIKLTDFGFSCQLDPGEK-----------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 216 (298)
T ss_dssp EEECTT-------CCEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHH
T ss_pred EEEcCC-------CcEEEecccchhhcCCCcc-----------cccccCCccccCHHHhccccccccccCCcccccHhHH
Confidence 999877 7899999999876543211 11346899999999986321 124578999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1033 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1033 viL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
+++|+|++|..||......+....+..+........ ....++.+.+++.+||+.||
T Consensus 217 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~li~~~l~~dp 272 (298)
T 1phk_A 217 VIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE------------------------WDDYSDTVKDLVSRFLVVQP 272 (298)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT------------------------GGGSCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCccc------------------------ccccCHHHHHHHHHHccCCc
Confidence 999999999999998887777777655443211110 01345669999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCC
Q 001152 1113 TERPTAGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~ss 1132 (1137)
.+|||++|+++|+|+.....
T Consensus 273 ~~Rps~~~ll~h~~~~~~~~ 292 (298)
T 1phk_A 273 QKRYTAEEALAHPFFQQYVV 292 (298)
T ss_dssp GGSCCHHHHTTSGGGCTTC-
T ss_pred ccCCCHHHHHhChHhhhccc
Confidence 99999999999999986543
No 130
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.7e-38 Score=356.13 Aligned_cols=274 Identities=26% Similarity=0.325 Sum_probs=198.7
Q ss_pred CCCceEe-eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEec
Q 001152 801 FPSLSSC-DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 876 (1137)
Q Consensus 801 ~~~y~l~-~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~ 876 (1137)
-..|++. +.||+|+||.||+|.+ .+..||+|+..... . ...+ ++.+|+.++.++ +||||+++++++.+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~--~~~~----~~~~E~~~l~~~~~h~~i~~~~~~~~~ 82 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--G--HIRS----RVFREVEMLYQCQGHRNVLELIEFFEE 82 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--S--CCHH----HHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--c--hhHH----HHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3568885 7899999999999997 45789999864331 1 1112 347899999985 69999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.+ ..++||||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 83 ~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil 143 (316)
T 2ac3_A 83 ED--------------RFYLVFEKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143 (316)
T ss_dssp TT--------------EEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred CC--------------EEEEEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEE
Confidence 65 679999999999999999762 46899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccC-CCCCCchhhHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~s~ksDVWSLGviL 1035 (1137)
++.++ ....+||+|||++............ .........||+.|+|||++.+... ...++.++|||||||++
T Consensus 144 ~~~~~----~~~~~kl~Dfg~~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il 216 (316)
T 2ac3_A 144 CEHPN----QVSPVKICDFDLGSGIKLNGDCSPI---STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216 (316)
T ss_dssp ESCSS----SSCSEEECCTTCCC----------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHH
T ss_pred EccCC----CcCceEEEEccCccccccCCccccc---cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHH
Confidence 98762 1134999999998755422111000 0011123469999999999864100 12467899999999999
Q ss_pred HHHHhCCCCCCCCCH---------------HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHH
Q 001152 1036 LELLTLQVPYMGLSE---------------LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1100 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~---------------~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1100 (1137)
|+|++|..||.+... ..+...+..+........ ....++++
T Consensus 217 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~ 272 (316)
T 2ac3_A 217 YILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKD------------------------WAHISCAA 272 (316)
T ss_dssp HHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHH------------------------HTTSCHHH
T ss_pred HHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchh------------------------cccCCHHH
Confidence 999999999976432 223344443332111110 01345679
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 001152 1101 VDVFRRCTEENPTERPTAGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1101 ~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ss 1132 (1137)
.+|+.+||+.||.+|||++|+++|+|+....+
T Consensus 273 ~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~ 304 (316)
T 2ac3_A 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304 (316)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred HHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence 99999999999999999999999999986433
No 131
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=361.84 Aligned_cols=260 Identities=21% Similarity=0.296 Sum_probs=197.0
Q ss_pred CCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC--CCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~H--pNIVkllg~~~~~~ 878 (1137)
.+|++.+.||+|+||.||+|.+. +..||+|+..... ......+. +.+|+.+|++++| |||+++++++....
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~----~~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 82 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDS----YRNEIAYLNKLQQHSDKIIRLYDYEITDQ 82 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT--CCHHHHHH----HHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc--cchHHHHH----HHHHHHHHHhhhhcCCceEEEeeeEeeCC
Confidence 46999999999999999999874 4678999865432 22333334 4889999999986 99999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++|||| .+++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 83 --------------~~~lv~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~ 142 (343)
T 3dbq_A 83 --------------YIYMVMEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 142 (343)
T ss_dssp --------------EEEEEECC-CSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred --------------EEEEEEeC-CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE
Confidence 67999995 57999999986 34699999999999999999999999999999999999996
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc-------CCCCCCchhhHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSY 1031 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVWSL 1031 (1137)
. +.+||+|||+++........ .......||+.|+|||++.+.. ....++.++|||||
T Consensus 143 ~--------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diwsl 206 (343)
T 3dbq_A 143 D--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206 (343)
T ss_dssp T--------TEEEECCCSSSCCC--------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHH
T ss_pred C--------CcEEEeecccccccCccccc--------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHH
Confidence 3 57999999999765432211 1112446999999999986411 12467899999999
Q ss_pred HHHHHHHHhCCCCCCCCCH-HHHHHHHHcCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001152 1032 GCLLLELLTLQVPYMGLSE-LEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1109 (1137)
Q Consensus 1032 GviL~ELLTG~~Pf~~~~~-~el~~~I~~g~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~ 1109 (1137)
||++|+|++|..||..... ......+.... ...++ ...++++.+|+.+||+
T Consensus 207 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~L~ 259 (343)
T 3dbq_A 207 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---------------------------DIPEKDLQDVLKCCLK 259 (343)
T ss_dssp HHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC---------------------------CCSCHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCc---------------------------ccCCHHHHHHHHHHcC
Confidence 9999999999999976432 22222222211 11110 0223458999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001152 1110 ENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1110 ~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
.||.+|||+.|+++|+|+...
T Consensus 260 ~dp~~Rpt~~e~l~hp~~~~~ 280 (343)
T 3dbq_A 260 RDPKQRISIPELLAHPYVQIQ 280 (343)
T ss_dssp SSTTTSCCHHHHHTSHHHHSC
T ss_pred CChhHCCCHHHHHhCcccccc
Confidence 999999999999999999754
No 132
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.7e-38 Score=376.24 Aligned_cols=254 Identities=25% Similarity=0.385 Sum_probs=209.4
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
...+|++.+.||+|+||.||+|.+.+..||||+.+... ..+. +.+|+.+|++++|||||++++++.+...
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~------~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~ 260 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA------TAQA----FLAEASVMTQLRHSNLVQLLGVIVEEKG 260 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT------TSHH----HHHHHHHHHTCCCTTBCCEEEEEECTTS
T ss_pred ChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch------HHHH----HHHHHHHHHhccCCCEEEEEEEEEcCCC
Confidence 45679999999999999999999999999999864221 1223 4889999999999999999999875431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++|+|.++++.. +...+++..++.|+.||+.||+|||++||+||||||+|||++.
T Consensus 261 -------------~~~iv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~ 324 (450)
T 1k9a_A 261 -------------GLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 324 (450)
T ss_dssp -------------CEEEEEECCTTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred -------------ceEEEEEecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECC
Confidence 469999999999999999862 3345799999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+++...... ....+++.|+|||++.+ ..++.++|||||||++|||+
T Consensus 325 ~-------~~~kl~DfG~a~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~sDvwslG~~l~el~ 380 (450)
T 1k9a_A 325 D-------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEIY 380 (450)
T ss_dssp T-------SCEEECCCTTCEECC-------------------CCCTTTSCHHHHHS----SCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeeCCCcccccccc-------------cCCCCCcceeCHHHhcC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 789999999987433211 12247889999999975 56899999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 T-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+ |..||.+....++...+..+..+..+. .+++++.+||.+||+.||.+|||+
T Consensus 381 t~g~~P~~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dp~~Rpt~ 433 (450)
T 1k9a_A 381 SFGRVPYPRIPLKDVVPRVEKGYKMDAPD---------------------------GCPPAVYDVMKNCWHLDAATRPTF 433 (450)
T ss_dssp TTTCCSSTTSCTTTHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------cCCHHHHHHHHHHcCCChhHCcCH
Confidence 8 999999877777777776654433221 345669999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
.++++.+.....
T Consensus 434 ~~l~~~L~~i~~ 445 (450)
T 1k9a_A 434 LQLREQLEHIRT 445 (450)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999877643
No 133
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.7e-38 Score=358.58 Aligned_cols=268 Identities=24% Similarity=0.344 Sum_probs=207.0
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HHhCCCCCcceeeeeE
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHK 874 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~i-L~~L~HpNIVkllg~~ 874 (1137)
.....+|++.+.||+|+||.||+|++ .+..||||+.... .... .... +..|+.+ ++.++||||+++++++
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~-~~~~----~~~e~~~~~~~~~h~~iv~~~~~~ 119 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT--VNSQ-EQKR----LLMDLDISMRTVDCPFTVTFYGAL 119 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--CCCH-HHHH----HHHHHHHHHTTCCCTTTCCEEEEE
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccc--cCcH-HHHH----HHHHHHHHHhhcCCCcEEEEeeEE
Confidence 34567899999999999999999998 4577888875432 2222 2222 2456555 7788999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSE 953 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~-gIIHrDLKP~ 953 (1137)
...+ ..++||||++ ++|.+++...... ...+++..++.|+.||+.||+|||++ ||+||||||+
T Consensus 120 ~~~~--------------~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~ 183 (340)
T 3an0_A 120 FREG--------------DVWICMELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 183 (340)
T ss_dssp ECSS--------------CEEEEECCCS-EEHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCST
T ss_pred EeCC--------------cEEEEHHHhh-CcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHH
Confidence 8765 5699999997 5999998764333 35799999999999999999999987 9999999999
Q ss_pred CeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001152 954 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1033 (1137)
Q Consensus 954 NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1033 (1137)
|||++.+ +.+||+|||++......... ....||+.|+|||++.+......++.++|||||||
T Consensus 184 NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~ 245 (340)
T 3an0_A 184 NVLINAL-------GQVKMCDFGISGYLVDSVAK-----------TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGI 245 (340)
T ss_dssp TEEECST-------TCEEECCCSHHHHHSCHHHH-----------HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHH
T ss_pred HEEECCC-------CCEEEeeCCCceeccccccc-----------ccCCCCccccCccccccccccCCCCchhhHHHHHH
Confidence 9999987 78999999998765432111 12369999999999864323456889999999999
Q ss_pred HHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1034 LLLELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1034 iL~ELLTG~~Pf~~~-~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
++|||++|+.||... ...+....+.....+..+. ..+++++.+|+.+||+.||
T Consensus 246 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~dp 299 (340)
T 3an0_A 246 TMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA--------------------------DKFSAEFVDFTSQCLKKNS 299 (340)
T ss_dssp HHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCG--------------------------GGSCHHHHHHHHHHTCSSG
T ss_pred HHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCc--------------------------ccCCHHHHHHHHHHccCCc
Confidence 999999999999863 3333343433332222111 1345669999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCC
Q 001152 1113 TERPTAGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~ss 1132 (1137)
++|||+.||++|+|+....+
T Consensus 300 ~~Rps~~ell~hp~f~~~~~ 319 (340)
T 3an0_A 300 KERPTYPELMQHPFFTLHES 319 (340)
T ss_dssp GGSCCHHHHTTSHHHHHHTT
T ss_pred ccCcCHHHHhcCcCcccccc
Confidence 99999999999999975443
No 134
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.8e-38 Score=350.32 Aligned_cols=281 Identities=19% Similarity=0.280 Sum_probs=208.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
+.+|++.+.||+|+||.||+|++. +..+|+|+..... .... ....+.+|+.++++++||||+++++++...+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEG----VPSTAIREISLLKELNHPNIVKLLDVIHTEN 75 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCc--cchh----hHHHHHHHHHHHHHcCCCCeeeEEEEEecCC
Confidence 678999999999999999999985 5778888743322 1111 1223478999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||++ ++|.+++... ....+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 76 --------------~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~ 137 (299)
T 2r3i_A 76 --------------KLYLVFEFLH-QDLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137 (299)
T ss_dssp --------------EEEEEEECCS-EEHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred --------------ceEEEEEccc-CCHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEc
Confidence 6799999997 7999998762 234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++......... .....+|+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 138 ~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~~l 197 (299)
T 2r3i_A 138 TE-------GAIKLADFGLARAFGVPVRT----------YTHEVVTLWYRAPEILLG---AKYYSTAVDIWSLGCIFAEM 197 (299)
T ss_dssp TT-------SCEEECSTTHHHHHCCCSBC----------TTSCBCCCTTCCHHHHTT---CSSCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEECcchhhhhccCCccc----------cCcccccccccCcHHhhc---cccCChHHHHHHHHHHHHHH
Confidence 87 78999999998765432111 123468999999999875 23478999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcC--CCCCch-hHHhhhcccccccccccCCCCCCc---hhhhhhHHHHHHHHHHhcccCC
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMG--KRPRLT-DELEALGSCHEHEVAQSGSGFEKP---EAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g--~~p~l~-~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
++|+.||.+....+....+... ..+... ....... ............ ......++++.+++.+||+.||
T Consensus 198 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 272 (299)
T 2r3i_A 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP-----DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP 272 (299)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST-----TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSST
T ss_pred HhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCc-----ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCc
Confidence 9999999988877666555332 111110 0000000 000000000000 1112456779999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001152 1113 TERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~ 1130 (1137)
++|||++|+++|+|+...
T Consensus 273 ~~Rpt~~~~l~hp~~~~~ 290 (299)
T 2r3i_A 273 NKRISAKAALAHPFFQDV 290 (299)
T ss_dssp TTSCCHHHHHTSGGGTTC
T ss_pred ccCCCHHHHhcChhhhcC
Confidence 999999999999999854
No 135
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.4e-38 Score=351.81 Aligned_cols=265 Identities=24% Similarity=0.405 Sum_probs=196.5
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.-.+|++.++||+|+||+||+|++.+ .+|+|+.... .......+.+ .+|+.++++++||||++++++....
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~-- 92 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVT--APTPQQLQAF----KNEVGVLRKTRHVNILLFMGYSTAP-- 92 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCS--SCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSS--
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEecc--CCCHHHHHHH----HHHHHHHHhCCCCcEEEEEeeccCC--
Confidence 34579999999999999999999765 4888886433 2333444444 8899999999999999999975432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++.. ....+++..++.|+.||+.||+|||++||+||||||+|||++.
T Consensus 93 -------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~ 155 (289)
T 3og7_A 93 -------------QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE 155 (289)
T ss_dssp -------------SCEEEEECCCEEEHHHHHTT----C---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred -------------ccEEEEEecCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECC
Confidence 35999999999999999864 2356999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++......... .......||+.|+|||++... ....++.++||||||+++|+|+
T Consensus 156 ~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~Di~slG~il~el~ 219 (289)
T 3og7_A 156 D-------NTVKIGDFGLATEKSRWSGS--------HQFEQLSGSILWMAPEVIRMQ-DSNPYSFQSDVYAFGIVLYELM 219 (289)
T ss_dssp T-------TEEEECCCC--------------------------CCCTTCCHHHHC-----CCSCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEccceecccccccccc--------ccccccCCCccccCchhhccc-CCCCCCcccchHHHHHHHHHHH
Confidence 7 78999999998754432111 111234689999999998632 2356789999999999999999
Q ss_pred hCCCCCCCCCH-HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 TLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 TG~~Pf~~~~~-~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+|+.||..... ..+...+..+........ ....+++++.+|+.+||+.||.+|||+
T Consensus 220 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~ 276 (289)
T 3og7_A 220 TGQLPYSNINNRDQIIEMVGRGSLSPDLSK-----------------------VRSNCPKRMKRLMAECLKKKRDERPSF 276 (289)
T ss_dssp HSSCTTSSCCCHHHHHHHHHHTSCCCCTTS-----------------------SCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HCCCCccccchHHHHHHHhcccccCcchhh-----------------------ccccCCHHHHHHHHHHccCChhhCCCH
Confidence 99999987544 344444444332211100 011455679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001152 1119 GDLYEMFVART 1129 (1137)
Q Consensus 1119 ~EVL~~L~~~~ 1129 (1137)
.|+++.+....
T Consensus 277 ~ell~~L~~l~ 287 (289)
T 3og7_A 277 PRILAEIEELA 287 (289)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999998654
No 136
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.5e-38 Score=373.01 Aligned_cols=262 Identities=24% Similarity=0.256 Sum_probs=194.6
Q ss_pred CCCceEe-eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHH-hCCCCCcceeeeeEec
Q 001152 801 FPSLSSC-DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLG-ALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 801 ~~~y~l~-~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~-~L~HpNIVkllg~~~~ 876 (1137)
+.+|.+. +.||+|+||+||+|.+. +..||+|+.... .. +.+|+.++. ..+||||+++++++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~----~~~E~~~~~~~~~hp~iv~l~~~~~~ 126 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PK----ARREVELHWRASQCPHIVRIVDVYEN 126 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HH----HHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------hh----HHHHHHHHHHhcCCCCcceEeEEEee
Confidence 5678776 78999999999999985 467899875311 11 256888874 4579999999999865
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.. .....+|+||||++||+|.+++.. .+...+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 127 ~~----------~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nil 193 (400)
T 1nxk_A 127 LY----------AGRKCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193 (400)
T ss_dssp EE----------TTEEEEEEEEECCCSEEHHHHHHC---C---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred cc----------cCCcEEEEEEEeCCCCcHHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEE
Confidence 11 011267999999999999999975 22346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+. ..+.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|
T Consensus 194 l~~~~----~~~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ 254 (400)
T 1nxk_A 194 YTSKR----PNAILKLTDFGFAKETTSHNS-----------LTTPCYTPYYVAPEVLGP----EKYDKSCDMWSLGVIMY 254 (400)
T ss_dssp ESSSS----TTCCEEECCCTTCEECC----------------------CTTCCGGGSCC----CCSSSHHHHHHHHHHHH
T ss_pred EecCC----CCccEEEEecccccccCCCCc-----------cccCCCCCCccCHhhcCC----CCCCCcccHHHHHHHHH
Confidence 98631 127899999999975443211 123468999999999865 57889999999999999
Q ss_pred HHHhCCCCCCCCCHHH----HHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1037 ELLTLQVPYMGLSELE----IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~e----l~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
+|++|..||.+..... ....+..+....... ....+++++.+||.+||+.||
T Consensus 255 ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~~dP 310 (400)
T 1nxk_A 255 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP------------------------EWSEVSEEVKMLIRNLLKTEP 310 (400)
T ss_dssp HHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTT------------------------TTTTSCHHHHHHHHTTSCSSG
T ss_pred HHHhCCCCCCCCccccccHHHHHHHHcCcccCCCc------------------------ccccCCHHHHHHHHHHCCCCh
Confidence 9999999997644321 223333322111000 001345679999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001152 1113 TERPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~s 1131 (1137)
.+|||+.|+++|+|+....
T Consensus 311 ~~Rpt~~eil~hp~~~~~~ 329 (400)
T 1nxk_A 311 TQRMTITEFMNHPWIMQST 329 (400)
T ss_dssp GGSCCHHHHHHSHHHHTTT
T ss_pred hHCcCHHHHhcCccccCCC
Confidence 9999999999999998643
No 137
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.8e-38 Score=372.95 Aligned_cols=284 Identities=23% Similarity=0.239 Sum_probs=206.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||+||+|++. +..||||+...... . ..+|+++|+.++|||||++++++.....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~----~~~E~~il~~l~hpniv~l~~~~~~~~~ 121 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------F----KNRELQIMRKLDHCNIVRLRYFFYSSGE 121 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------S----CCHHHHHHHTCCCTTBCCEEEEEEEEET
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------h----HHHHHHHHHHcCCCCccceeeEEeccCC
Confidence 46999999999999999999984 57788887532211 1 1469999999999999999999865321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
. .....+++||||++ ++|.+.+..... ....+++..++.|+.||+.||+|||++||+||||||+|||++.
T Consensus 122 ~--------~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~ 191 (420)
T 1j1b_A 122 K--------KDEVYLNLVLDYVP-ETVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 191 (420)
T ss_dssp T--------TTEEEEEEEEECCC-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET
T ss_pred C--------CcceeEEeehhccc-ccHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC
Confidence 0 11225789999997 578777765332 2357999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+. +.+||+|||+++....... .....||+.|+|||++.+ ...++.++|||||||++|||+
T Consensus 192 ~~------~~~kl~DFG~a~~~~~~~~-----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~ell 251 (420)
T 1j1b_A 192 DT------AVLKLCDFGSAKQLVRGEP-----------NVSYICSRYYRAPELIFG---ATDYTSSIDVWSAGCVLAELL 251 (420)
T ss_dssp TT------TEEEECCCTTCEECCTTCC-----------CCSCCSCTTSCCHHHHTT---CSSCCTHHHHHHHHHHHHHHH
T ss_pred CC------CeEEeccchhhhhcccCCC-----------ceeeeeCCCcCCHHHHcC---CCCCCchhhhHHHHHHHHHHH
Confidence 52 5789999999976543211 113468999999999875 246889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcC-CCCCchhHHhhhccc-ccccccccCCCCCCc-hhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1040 TLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSC-HEHEVAQSGSGFEKP-EAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g-~~p~l~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|+.||.+.+..+....+... ..+. ...+...... ......+.. ..... ......++++.+|+.+||+.||.+||
T Consensus 252 ~G~~pf~~~~~~~~l~~i~~~lg~p~-~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~ 329 (420)
T 1j1b_A 252 LGQPIFPGDSGVDQLVEIIKVLGTPT-REQIREMNPNYTEFKFPQIK-AHPWTKVFRPRTPPEAIALCSRLLEYTPTARL 329 (420)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCSCC-HHHHHHHCSCCCCCCCCCCC-CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCC-HHHHHhhChhhhhhccCccC-CCCHHHhcCCCCCHHHHHHHHHhccCChhHCC
Confidence 999999988776665555332 2222 1111111000 000000000 00000 01124467899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001152 1117 TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~ 1129 (1137)
|+.|+++|+|+..
T Consensus 330 t~~e~l~hp~f~~ 342 (420)
T 1j1b_A 330 TPLEACAHSFFDE 342 (420)
T ss_dssp CHHHHHTSGGGGG
T ss_pred CHHHHhCCHhhcc
Confidence 9999999999964
No 138
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.8e-38 Score=344.85 Aligned_cols=256 Identities=21% Similarity=0.341 Sum_probs=209.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..+|++.+.||+|+||.||+|.+. +..+|+|+..... ... +. +.+|+.++++++||||+++++++.+.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~---~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 76 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSE---ED----FIEEAEVMMKLSHPKLVQLYGVCLEQA- 76 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BCH---HH----HHHHHHHHHTCCCTTBCCEEEEECSSS-
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CCH---HH----HHHHHHHHHhCCCCCEeeEEEEEccCC-
Confidence 467999999999999999999984 4678898864322 111 22 378999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 77 -------------~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~ 139 (267)
T 3t9t_A 77 -------------PICLVTEFMEHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 139 (267)
T ss_dssp -------------SCEEEECCCTTCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECG
T ss_pred -------------CeEEEEeCCCCCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECC
Confidence 459999999999999999762 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 140 ~-------~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 199 (267)
T 3t9t_A 140 N-------QVIKVSDFGMTRFVLDDQYT---------SSTGTKFPVKWASPEVFSF----SRYSSKSDVWSFGVLMWEVF 199 (267)
T ss_dssp G-------GCEEECCTTGGGGBCCHHHH---------STTSTTCCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEccccccccccccccc---------ccccccccccccChhhhcC----CCccchhchhhhHHHHHHHh
Confidence 7 78999999998765432111 0112357889999999975 46789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 T-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+ |..||......+....+..+..+..+. ..++.+.+++.+||+.||.+|||+
T Consensus 200 ~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps~ 252 (267)
T 3t9t_A 200 SEGKIPYENRSNSEVVEDISTGFRLYKPR---------------------------LASTHVYQIMNHCWRERPEDRPAF 252 (267)
T ss_dssp TTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred ccCCCCCCCCCHHHHHHHHhcCCcCCCCc---------------------------cCcHHHHHHHHHHccCChhhCcCH
Confidence 9 899999888887777776654322221 234458999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
.++++++.....
T Consensus 253 ~~ll~~L~~l~~ 264 (267)
T 3t9t_A 253 SRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999987643
No 139
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.5e-38 Score=385.59 Aligned_cols=259 Identities=23% Similarity=0.315 Sum_probs=208.4
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
....+|++.+.||+|+||.||+|++. +..||+|+...... ........+.+|+.+|+.++|||||++++++.+
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~-----~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~ 255 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-----KKRKGEAMALNEKQILEKVNSRFVVSLAYAYET 255 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh-----hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee
Confidence 35678999999999999999999984 57788988643211 111112234789999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.+ ..|+||||++||+|.+++.. .+...+++..++.|+.||+.||+|||++||+||||||+|||
T Consensus 256 ~~--------------~l~lVmEy~~gg~L~~~l~~---~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNIL 318 (576)
T 2acx_A 256 KD--------------ALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318 (576)
T ss_dssp SS--------------EEEEEECCCCSCBHHHHHHS---SSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred CC--------------EEEEEEEcCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEE
Confidence 65 67999999999999999875 23345999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||+++........ ...+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 319 ld~~-------g~vKL~DFGla~~~~~~~~~-----------~~~~GT~~Y~APEvl~~----~~~~~~~DiwSLGvily 376 (576)
T 2acx_A 319 LDDH-------GHIRISDLGLAVHVPEGQTI-----------KGRVGTVGYMAPEVVKN----ERYTFSPDWWALGCLLY 376 (576)
T ss_dssp ECTT-------SCEEECCCTTCEECCTTCCE-----------ECCCSCGGGCCHHHHTT----CEESSHHHHHHHHHHHH
T ss_pred EeCC-------CCeEEEecccceecccCccc-----------cccCCCccccCHHHHcC----CCCCccchHHHHHHHHH
Confidence 9987 78999999999765432111 13469999999999975 46889999999999999
Q ss_pred HHHhCCCCCCCCC----HHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1037 ELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~----~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
||++|..||.+.. ..++...+..... .++ ...++++.+||.+||+.||
T Consensus 377 eLltG~~PF~~~~~~~~~~~i~~~i~~~~~-~~p---------------------------~~~s~~~~dLI~~lL~~dP 428 (576)
T 2acx_A 377 EMIAGQSPFQQRKKKIKREEVERLVKEVPE-EYS---------------------------ERFSPQARSLCSQLLCKDP 428 (576)
T ss_dssp HHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHHHHTCSSG
T ss_pred HHHhCCCCCcccccchhHHHHHHHhhcccc-cCC---------------------------ccCCHHHHHHHHHhccCCH
Confidence 9999999998643 3444444443221 111 1344569999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhc
Q 001152 1113 TERP-----TAGDLYEMFVART 1129 (1137)
Q Consensus 1113 ~~RP-----Sa~EVL~~L~~~~ 1129 (1137)
.+|| +++||++|+|+..
T Consensus 429 ~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 429 AERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp GGSTTCSSSHHHHHHTSGGGTT
T ss_pred HHcCCCCCCCHHHHHhChhhcc
Confidence 9999 8999999999975
No 140
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-38 Score=348.40 Aligned_cols=256 Identities=22% Similarity=0.313 Sum_probs=206.7
Q ss_pred CCceEee-eecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 802 PSLSSCD-EAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 802 ~~y~l~~-~LG~GsfG~Vy~a~~----~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
.+|.+.+ .||+|+||.||+|.+ .+..||+|+.... ......+. +.+|+.++++++||||+++++++..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~ 81 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKADTEE----MMREAQIMHQLDNPYIVRLIGVCQA 81 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS---CCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc---cchhHHHH----HHHHHHHHHhCCCCCEeEEEEEecC
Confidence 4577776 999999999999986 3456888875432 12333333 4889999999999999999999843
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
. ..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+
T Consensus 82 ~---------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 142 (287)
T 1u59_A 82 E---------------ALMLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVL 142 (287)
T ss_dssp S---------------SEEEEEECCTTEEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred C---------------CcEEEEEeCCCCCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEE
Confidence 2 46999999999999999864 2346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++|||||||++|
T Consensus 143 i~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~ 204 (287)
T 1u59_A 143 LVNR-------HYAKISDFGLSKALGADDSYY-------TARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGVTMW 204 (287)
T ss_dssp EEET-------TEEEECCCTTCEECTTCSCEE-------CCCCSSCCCGGGCCHHHHHH----CEECHHHHHHHHHHHHH
T ss_pred EcCC-------CCEEECcccceeeeccCccee-------eccccccccccccCHHHhcc----CCCCchhhHHHHHHHHH
Confidence 9977 789999999997654322110 11123357889999999875 45789999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1037 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1037 ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
+|++ |..||......++...+..+..+..+. .+++++.+++.+||+.||.+|
T Consensus 205 ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~R 257 (287)
T 1u59_A 205 EALSYGQKPYKKMKGPEVMAFIEQGKRMECPP---------------------------ECPPELYALMSDCWIYKWEDR 257 (287)
T ss_dssp HHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSGGGS
T ss_pred HHHcCCCCCcccCCHHHHHHHHhcCCcCCCCC---------------------------CcCHHHHHHHHHHcCCChhhC
Confidence 9998 999999888777777776655433221 344569999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001152 1116 PTAGDLYEMFVAR 1128 (1137)
Q Consensus 1116 PSa~EVL~~L~~~ 1128 (1137)
|++.+++++++..
T Consensus 258 ps~~~l~~~l~~~ 270 (287)
T 1u59_A 258 PDFLTVEQRMRAC 270 (287)
T ss_dssp CCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 9999999999876
No 141
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=367.10 Aligned_cols=263 Identities=22% Similarity=0.265 Sum_probs=204.1
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceee
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 871 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~-----~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkll 871 (1137)
...+.+|++.+.||+|+||.||+|++ .+..||+|+.............+.+ .+|+.+++.+ +||||++++
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~----~~E~~~l~~l~~h~~iv~~~ 125 (355)
T 1vzo_A 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT----RTERQVLEHIRQSPFLVTLH 125 (355)
T ss_dssp CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGC----CCHHHHHHHHHTCTTBCCEE
T ss_pred cccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHH----HHHHHHHHHccCCCceeEEE
Confidence 34567899999999999999999998 4578999986432211111112222 6699999999 599999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 001152 872 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 951 (1137)
Q Consensus 872 g~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLK 951 (1137)
+++.... ..++||||+++++|.+++... ..+++..+..++.||+.||+|||++||+|||||
T Consensus 126 ~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk 186 (355)
T 1vzo_A 126 YAFQTET--------------KLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIK 186 (355)
T ss_dssp EEEEETT--------------EEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred EEEeeCc--------------eEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 9998765 679999999999999999762 368999999999999999999999999999999
Q ss_pred CCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001152 952 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1031 (1137)
Q Consensus 952 P~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1031 (1137)
|+|||++.+ +.+||+|||+++........ ......||+.|+|||++.+ ....++.++|||||
T Consensus 187 p~NIll~~~-------~~~kl~DfG~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~--~~~~~~~~~Dvwsl 248 (355)
T 1vzo_A 187 LENILLDSN-------GHVVLTDFGLSKEFVADETE---------RAYDFCGTIEYMAPDIVRG--GDSGHDKAVDWWSL 248 (355)
T ss_dssp GGGEEECTT-------SCEEESCSSEEEECCGGGGG---------GGCGGGSCCTTCCHHHHTT--CC---CTHHHHHHH
T ss_pred HHHEEECCC-------CcEEEeeCCCCeecccCCCC---------cccCcccCcCccChhhhcC--CCCCCCchhhHHHH
Confidence 999999887 78999999998765432111 0113469999999999975 22457899999999
Q ss_pred HHHHHHHHhCCCCCCCC----CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001152 1032 GCLLLELLTLQVPYMGL----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1107 (1137)
Q Consensus 1032 GviL~ELLTG~~Pf~~~----~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~C 1107 (1137)
||++|+|++|..||... ....+...+..... .++ ...++.+.+|+.+|
T Consensus 249 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~li~~~ 300 (355)
T 1vzo_A 249 GVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP-PYP---------------------------QEMSALAKDLIQRL 300 (355)
T ss_dssp HHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCccCCccchHHHHHHHHhccCC-CCC---------------------------cccCHHHHHHHHHH
Confidence 99999999999999743 22333333332221 111 13345689999999
Q ss_pred cccCCCCCC-----CHHHHHHHHHhhc
Q 001152 1108 TEENPTERP-----TAGDLYEMFVART 1129 (1137)
Q Consensus 1108 L~~DP~~RP-----Sa~EVL~~L~~~~ 1129 (1137)
|+.||.+|| +++|+++|+|+..
T Consensus 301 L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 301 LMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp TCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred hhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 999999999 9999999999974
No 142
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=6.4e-38 Score=348.26 Aligned_cols=267 Identities=21% Similarity=0.318 Sum_probs=204.3
Q ss_pred CCCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeee
Q 001152 796 LDPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 873 (1137)
Q Consensus 796 ~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~ 873 (1137)
++.....+|++.+.||+|+||+||+|++. +..+|+|+............. ....++.+|+.++++++||||++++++
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~ 91 (287)
T 4f0f_A 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI-EKFQEFQREVFIMSNLNHPNIVKLYGL 91 (287)
T ss_dssp CCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHH-CCSHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred hhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHH-HHHHHHHHHHHHHHhCCCCCchhhhee
Confidence 34445678999999999999999999984 577888875443322222211 111345889999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCC
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIK 951 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~g--IIHrDLK 951 (1137)
+.+.. ++||||+++++|.+++.. ....+++..++.++.||+.||+|||++| |+|||||
T Consensus 92 ~~~~~----------------~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dik 151 (287)
T 4f0f_A 92 MHNPP----------------RMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151 (287)
T ss_dssp ETTTT----------------EEEEECCTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCS
T ss_pred ecCCC----------------eEEEEecCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCC
Confidence 86543 799999999999998865 2346999999999999999999999999 9999999
Q ss_pred CCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001152 952 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1031 (1137)
Q Consensus 952 P~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1031 (1137)
|+|||++.+. ......+||+|||+++...... ....||+.|+|||++.+ ....++.++|||||
T Consensus 152 p~Nil~~~~~--~~~~~~~kl~Dfg~~~~~~~~~-------------~~~~g~~~y~aPE~~~~--~~~~~~~~~Di~sl 214 (287)
T 4f0f_A 152 SPNIFLQSLD--ENAPVCAKVADFGLSQQSVHSV-------------SGLLGNFQWMAPETIGA--EEESYTEKADTYSF 214 (287)
T ss_dssp GGGEEESCCC--TTCSCCEEECCCTTCBCCSSCE-------------ECCCCCCTTSCGGGSSC--SSCEECHHHHHHHH
T ss_pred cceEEEeccC--CCCceeEEeCCCCccccccccc-------------cccCCCccccCchhhcc--CCCCcCchhhHHHH
Confidence 9999998762 1222459999999986433211 13468999999999854 23457899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHH--HHHHHHc-CCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001152 1032 GCLLLELLTLQVPYMGLSELE--IHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1108 (1137)
Q Consensus 1032 GviL~ELLTG~~Pf~~~~~~e--l~~~I~~-g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL 1108 (1137)
||++|+|++|..||......+ ....+.. ...+.++. .+++++.+++.+||
T Consensus 215 G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l 267 (287)
T 4f0f_A 215 AMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE---------------------------DCPPRLRNVIELCW 267 (287)
T ss_dssp HHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCT---------------------------TSCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCc---------------------------ccCHHHHHHHHHHh
Confidence 999999999999997654322 2333322 22222111 34566999999999
Q ss_pred ccCCCCCCCHHHHHHHHHh
Q 001152 1109 EENPTERPTAGDLYEMFVA 1127 (1137)
Q Consensus 1109 ~~DP~~RPSa~EVL~~L~~ 1127 (1137)
+.||.+|||++|+++.+..
T Consensus 268 ~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 268 SGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CSSGGGSCCHHHHHHHHHT
T ss_pred cCChhhCcCHHHHHHHHHh
Confidence 9999999999999998864
No 143
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.7e-38 Score=368.96 Aligned_cols=259 Identities=21% Similarity=0.345 Sum_probs=197.1
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
...+|++.+.||+|+||.||+|++. +..||+|+.... . .....+. +.+|+.++++++||||+++++++
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~--~-~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~ 115 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--Y-TEKQRRD----FLGEASIMGQFDHPNIIRLEGVV 115 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT--C-CHHHHHH----HHHHHHHHTTCCCTTBCCEEEEE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc--c-CHHHHHH----HHHHHHHHHhCCCCCCCeEEEEE
Confidence 3457999999999999999999874 356888874322 1 2333333 48999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+.. ..++||||+++++|.++++. ....+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 116 ~~~~--------------~~~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 177 (373)
T 2qol_A 116 TKSK--------------PVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177 (373)
T ss_dssp CSSS--------------SCEEEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred eeCC--------------ceEEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce
Confidence 8665 45999999999999999975 23469999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||+++......... .......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 178 Ill~~~-------~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~SlG~i 239 (373)
T 2qol_A 178 ILINSN-------LVCKVSDFGLGRVLEDDPEAA-------YTTRGGKIPIRWTSPEAIAY----RKFTSASDVWSYGIV 239 (373)
T ss_dssp EEECTT-------CCEEECCC-----------------------------CTTSCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEECcCccccccccCCccc-------eeccCCCcCCCccChhhhcc----CCcCchhcHHHHHHH
Confidence 999877 789999999997654322110 00112235778999999976 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|||++ |..||......++...+..+.....+. .++..+.+++.+||+.||.
T Consensus 240 l~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dp~ 292 (373)
T 2qol_A 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPM---------------------------DCPAALYQLMLDCWQKDRN 292 (373)
T ss_dssp HHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCT---------------------------TCBHHHHHHHHHHTCSSGG
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cccHHHHHHHHHHhCcChh
Confidence 999998 999999888887777765543221111 3445699999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001152 1114 ERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~ 1128 (1137)
+||++.+|++.+...
T Consensus 293 ~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 293 NRPKFEQIVSILDKL 307 (373)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999988765
No 144
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.2e-38 Score=369.16 Aligned_cols=285 Identities=21% Similarity=0.234 Sum_probs=204.6
Q ss_pred CCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 880 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~~ 880 (1137)
.+|++.+.||+|+||+||+|++.. ..+|+|....+... ..+|+.+++.++|||||++++++......
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------------~~~E~~il~~l~h~niv~l~~~~~~~~~~ 107 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------------KNRELQIMRIVKHPNVVDLKAFFYSNGDK 107 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------------CCHHHHHHHTCCCTTBCCEEEEEEEESSS
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------------HHHHHHHHHhCCCCCcceEEEEEEecCCC
Confidence 469999999999999999999854 55777754322111 13589999999999999999998764310
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec-c
Q 001152 881 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID-L 959 (1137)
Q Consensus 881 ~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld-~ 959 (1137)
......++||||++ +++...+..... ....+++..++.|+.||+.||+|||++||+||||||+|||++ .
T Consensus 108 --------~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~ 177 (394)
T 4e7w_A 108 --------KDEVFLNLVLEYVP-ETVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP 177 (394)
T ss_dssp --------SSCEEEEEEEECCS-EEHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT
T ss_pred --------CCceEEEEEeeccC-ccHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCC
Confidence 11225789999998 455555543222 235799999999999999999999999999999999999998 4
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+++....... .....||+.|+|||++.+ ...++.++|||||||++|||+
T Consensus 178 ~-------~~~kL~DFG~a~~~~~~~~-----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~ell 236 (394)
T 4e7w_A 178 S-------GVLKLIDFGSAKILIAGEP-----------NVSYICSRYYRAPELIFG---ATNYTTNIDIWSTGCVMAELM 236 (394)
T ss_dssp T-------TEEEECCCTTCEECCTTCC-----------CCSSCSCGGGCCHHHHTT---CSSCCTHHHHHHHHHHHHHHH
T ss_pred C-------CcEEEeeCCCcccccCCCC-----------CcccccCcCccCHHHHcC---CCCCCcHHHHHHHHHHHHHHH
Confidence 5 7899999999976543211 123468999999999875 245889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhc-ccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALG-SCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+|+.||.+.+..+....+...........+.... .......................++++.+|+.+||+.||.+|||+
T Consensus 237 ~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 316 (394)
T 4e7w_A 237 QGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTA 316 (394)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCH
Confidence 9999999988777666653322111111111110 000000000000000000112356789999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001152 1119 GDLYEMFVART 1129 (1137)
Q Consensus 1119 ~EVL~~L~~~~ 1129 (1137)
.|+++|+|+..
T Consensus 317 ~e~l~hp~f~~ 327 (394)
T 4e7w_A 317 IEALCHPFFDE 327 (394)
T ss_dssp HHHHTSGGGST
T ss_pred HHHhcChhhhh
Confidence 99999999974
No 145
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.8e-38 Score=371.44 Aligned_cols=298 Identities=19% Similarity=0.231 Sum_probs=201.8
Q ss_pred CCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||.||+|.+.. ..||+|+.. .........+ ++.+|+.+|+.++||||+++++++....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~--~~~~~~~~~~----~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 98 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN--RMFEDLIDCK----RILREITILNRLKSDYIIRLYDLIIPDD 98 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEC--STTTSHHHHH----HHHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeC--chhcChHHHH----HHHHHHHHHHHcCCCCcceEEEEEecCC
Confidence 3679999999999999999999854 567777643 3223333333 3489999999999999999999987653
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
.. .....|+||||+. ++|.++++. ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 99 ~~---------~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~ 163 (432)
T 3n9x_A 99 LL---------KFDELYIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163 (432)
T ss_dssp TT---------TCCCEEEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred CC---------cCCeEEEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC
Confidence 11 1236799999996 799999875 34699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccc------------cCCCCCCCcccCCCcccchhhhccccCCCCCCchh
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA------------HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1026 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~------------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1026 (1137)
.+ +.+||+|||+++............ ..........+||+.|+|||++.. ...++.++
T Consensus 164 ~~-------~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~---~~~~~~~~ 233 (432)
T 3n9x_A 164 QD-------CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL---QENYTKSI 233 (432)
T ss_dssp TT-------CCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT---CSCCCTHH
T ss_pred CC-------CCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc---CCCCCccc
Confidence 87 789999999998664322110000 000001234579999999999753 25689999
Q ss_pred hHHHHHHHHHHHHhCCCC-----------CCCCC-----------------HHHHHHHHH-cCCCCCchhHHhhhccccc
Q 001152 1027 DIWSYGCLLLELLTLQVP-----------YMGLS-----------------ELEIHDLIQ-MGKRPRLTDELEALGSCHE 1077 (1137)
Q Consensus 1027 DVWSLGviL~ELLTG~~P-----------f~~~~-----------------~~el~~~I~-~g~~p~l~~~l~~~~~~~~ 1077 (1137)
|||||||++|||++|..| |.+.+ ..+....+. ....|. ...+........
T Consensus 234 DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~-~~~~~~~~~~~~ 312 (432)
T 3n9x_A 234 DIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPT-EDDLKNINKPEV 312 (432)
T ss_dssp HHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCC-HHHHHTCCCHHH
T ss_pred ccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCC-HHHHHhccCHHH
Confidence 999999999999985444 43322 112222221 111111 111111000000
Q ss_pred ccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1078 HEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1078 ~~~~~---~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
..... ..............++++.+||.+||+.||.+|||++|+++|+|+..-
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 368 (432)
T 3n9x_A 313 IKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368 (432)
T ss_dssp HHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred HHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence 00000 000011111112467789999999999999999999999999999854
No 146
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.9e-38 Score=350.66 Aligned_cols=301 Identities=21% Similarity=0.237 Sum_probs=206.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|.+. +..||+|+.... .....+. +.+|+.++++++||||+++++++.....
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 82 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKH----ALREIKIIRRLDHDNIVKVFEILGPSGS 82 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHH----HHHHHHHHHTCCCTTBCCEEEEECTTSC
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHH----HHHHHHHHHhcCCCCeeEEEEecccccc
Confidence 57999999999999999999986 567888875422 2333333 4889999999999999999999865321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
....+..........++||||++ |+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 83 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~ 155 (320)
T 2i6l_A 83 QLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT 155 (320)
T ss_dssp BCCC----CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET
T ss_pred ccccccccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence 00000000112237899999997 799998854 46899999999999999999999999999999999999974
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
++ +.+||+|||++.......... .......+|+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 156 ~~------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~el~ 219 (320)
T 2i6l_A 156 ED------LVLKIGDFGLARIMDPHYSHK-------GHLSEGLVTKWYRSPRLLLS---PNNYTKAIDMWAAGCIFAEML 219 (320)
T ss_dssp TT------TEEEECCCTTCBCC---------------CCCGGGSCCTTCCHHHHHC---TTCCCHHHHHHHHHHHHHHHH
T ss_pred CC------CeEEEccCccccccCCCcccc-------cccccccccccccCcHHhcC---cccCCchhhhHhHHHHHHHHH
Confidence 31 689999999997654321110 11123457899999999864 246889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCC--CCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGF--EKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
+|+.||.+....+....+.............................. .........++++.+++.+||+.||.+|||
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 299 (320)
T 2i6l_A 220 TGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT 299 (320)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC
Confidence 999999988877776666443322211111111000000000000000 001111245778999999999999999999
Q ss_pred HHHHHHHHHhhcCCCC
Q 001152 1118 AGDLYEMFVARTSSSI 1133 (1137)
Q Consensus 1118 a~EVL~~L~~~~~ss~ 1133 (1137)
++|+++|+|+......
T Consensus 300 ~~ell~hp~~~~~~~p 315 (320)
T 2i6l_A 300 AEEALSHPYMSIYSFP 315 (320)
T ss_dssp HHHHHTSHHHHTTCC-
T ss_pred HHHHhCCcccccccCc
Confidence 9999999999865443
No 147
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.2e-38 Score=392.66 Aligned_cols=259 Identities=24% Similarity=0.292 Sum_probs=211.9
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeE
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 874 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~ 874 (1137)
...+.+|++.++||+|+||.||+|++.. ..||+|+....... .+.....+..|..++..+ +||||+++++++
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~ 411 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-----QDDDVECTMVEKRVLALPGKPPFLTQLHSCF 411 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH-----HTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc-----cHHHHHHHHHHHHHHHhccCCCeEEEEEEEE
Confidence 3467899999999999999999999854 56899986533110 111112347799999988 599999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+.+ .+||||||++||+|.++++.. ..+++..++.|+.||+.||+|||++|||||||||+|
T Consensus 412 ~~~~--------------~~~lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~N 472 (674)
T 3pfq_A 412 QTMD--------------RLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 472 (674)
T ss_dssp BCSS--------------EEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTT
T ss_pred EeCC--------------EEEEEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhh
Confidence 8765 679999999999999999862 469999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
|||+.+ +.+||+|||+++....... ......||+.|+|||++.+ ..|+.++|||||||+
T Consensus 473 ILl~~~-------g~ikL~DFGla~~~~~~~~----------~~~~~~GT~~Y~APE~l~~----~~~~~~~DvwSlGvi 531 (674)
T 3pfq_A 473 VMLDSE-------GHIKIADFGMCKENIWDGV----------TTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVL 531 (674)
T ss_dssp EEECSS-------SCEEECCCTTCEECCCTTC----------CBCCCCSCSSSCCHHHHTC----CCBSTHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEeecceeeccccCCc----------ccccccCCCcccCHhhhcC----CCCCccceEechHHH
Confidence 999987 7899999999975332211 1124579999999999975 578999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|||++|..||.+.+..++...|...... ++. ..++++.+||.+||+.||.+
T Consensus 532 lyelltG~~Pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~li~~lL~~dP~~ 583 (674)
T 3pfq_A 532 LYEMLAGQAPFEGEDEDELFQSIMEHNVA-YPK---------------------------SMSKEAVAICKGLMTKHPGK 583 (674)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHSSCCC-CCT---------------------------TSCHHHHHHHHHHSCSSSTT
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhCCCC-CCc---------------------------cCCHHHHHHHHHHccCCHHH
Confidence 99999999999999988888888764421 111 33456999999999999999
Q ss_pred CCCH-----HHHHHHHHhhc
Q 001152 1115 RPTA-----GDLYEMFVART 1129 (1137)
Q Consensus 1115 RPSa-----~EVL~~L~~~~ 1129 (1137)
||++ +||++|+||..
T Consensus 584 R~~~~~~~~~ei~~h~ff~~ 603 (674)
T 3pfq_A 584 RLGCGPEGERDIKEHAFFRY 603 (674)
T ss_dssp CTTCSTTHHHHHHSSGGGSS
T ss_pred CCCCCCCcHHHHhcCccccC
Confidence 9997 99999999964
No 148
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.1e-38 Score=372.58 Aligned_cols=281 Identities=21% Similarity=0.244 Sum_probs=204.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC------CCCCcceeeee
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL------RHSCIVEMYGH 873 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L------~HpNIVkllg~ 873 (1137)
.+|++.+.||+|+||+||+|.+. +..||||+.... ....+ .+.+|+.+++.+ .|+||++++++
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~----~~~~E~~~l~~l~~~~~~~~~~iv~~~~~ 167 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHR----QAAEEIRILEHLRKQDKDNTMNVIHMLEN 167 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHH----HHHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHH----HHHHHHHHHHHHhhccccCCcCEEEEEee
Confidence 57999999999999999999985 467888875321 22222 236788888776 57799999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCC
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 953 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~ 953 (1137)
+.... +.++||||+. ++|.+++... ....+++..++.|+.||+.||+|||++||+||||||+
T Consensus 168 ~~~~~--------------~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~ 229 (429)
T 3kvw_A 168 FTFRN--------------HICMTFELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPE 229 (429)
T ss_dssp EEETT--------------EEEEEECCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGG
T ss_pred cccCC--------------eEEEEEeccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence 98765 6799999996 7999998762 2345999999999999999999999999999999999
Q ss_pred CeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001152 954 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1033 (1137)
Q Consensus 954 NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1033 (1137)
|||++.+.. ..+||+|||++....... ....||+.|+|||++.+ ..++.++|||||||
T Consensus 230 NILl~~~~~-----~~vkL~DFG~a~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~ 287 (429)
T 3kvw_A 230 NILLKQQGR-----SGIKVIDFGSSCYEHQRV-------------YTYIQSRFYRAPEVILG----ARYGMPIDMWSLGC 287 (429)
T ss_dssp GEEESSTTS-----CCEEECCCTTCEETTCCC-------------CSSCSCGGGCCHHHHHT----BCCCTHHHHHHHHH
T ss_pred HeEEccCCC-----cceEEeecccceecCCcc-------------cccCCCCCccChHHHhC----CCCCchHHHHhHHH
Confidence 999997721 339999999986543211 13468999999999986 46899999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccc----ccccc-----------------------c-cCC
Q 001152 1034 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH----EHEVA-----------------------Q-SGS 1085 (1137)
Q Consensus 1034 iL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~----~~~~~-----------------------~-~~~ 1085 (1137)
++|||++|..||.+.+..+....+...........+....... ..... . ...
T Consensus 288 il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (429)
T 3kvw_A 288 ILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGP 367 (429)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECS
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCC
Confidence 9999999999999988877666653322111111111000000 00000 0 000
Q ss_pred CCCCc---hhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001152 1086 GFEKP---EAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1086 ~~~~~---~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~s 1131 (1137)
..... ......++.+.+||.+||+.||++|||++|+++|+|++...
T Consensus 368 ~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 368 PESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL 416 (429)
T ss_dssp TTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred ccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence 00000 00112356799999999999999999999999999998653
No 149
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-38 Score=355.69 Aligned_cols=270 Identities=24% Similarity=0.352 Sum_probs=205.4
Q ss_pred ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCCCCCC
Q 001152 804 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 883 (1137)
Q Consensus 804 y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~~~~~ 883 (1137)
|...+.||+|+||.||+|.+.+..+|+|+.............+ ++.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 103 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ----QFDQEIKVMAKCQHENLVELLGFSSDGD----- 103 (307)
T ss_dssp TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHH----HHHHHHHHHHHCCCTTBCCEEEEECSSS-----
T ss_pred cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHH----HHHHHHHHHHhcCCCCeEEEEEEEecCC-----
Confidence 4566899999999999999988999999865332222222223 3488999999999999999999998765
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecccccc
Q 001152 884 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 963 (1137)
Q Consensus 884 ~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~~~~ 963 (1137)
..++||||+++++|.+++.... ....+++..+..|+.||+.||+|||++||+||||||+||+++.+
T Consensus 104 ---------~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~--- 169 (307)
T 2nru_A 104 ---------DLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA--- 169 (307)
T ss_dssp ---------SCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---
T ss_pred ---------ceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC---
Confidence 4599999999999999997532 23469999999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001152 964 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1043 (1137)
Q Consensus 964 ~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG~~ 1043 (1137)
+.+||+|||++.......... ......||+.|+|||++.+ .++.++||||||+++|+|++|..
T Consensus 170 ----~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~g~~~y~aPE~~~~-----~~~~~~Dv~slG~il~~l~~g~~ 232 (307)
T 2nru_A 170 ----FTAKISDFGLARASEKFAQTV--------MTSRIVGTTAYMAPEALRG-----EITPKSDIYSFGVVLLEIITGLP 232 (307)
T ss_dssp ----CCEEECCCTTCEECCSCSSCE--------ECSSCCSCGGGCCHHHHTT-----EECTHHHHHHHHHHHHHHHHCCC
T ss_pred ----CcEEEeecccccccccccccc--------cccccCCCcCcCChHHhcC-----CCCccchhHHHHHHHHHHHHCCC
Confidence 789999999987654322110 1123468999999999864 46799999999999999999999
Q ss_pred CCCCCCHHH----HHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1044 PYMGLSELE----IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1044 Pf~~~~~~e----l~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
||......+ +...+.... ..+...+. . .........++.+.+++.+||+.||.+|||+.
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----------~-----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 295 (307)
T 2nru_A 233 AVDEHREPQLLLDIKEEIEDEE-KTIEDYID-----------K-----KMNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295 (307)
T ss_dssp SBCTTBSSSBTTHHHHHHHTTS-CCHHHHSC-----------S-----SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CcccCcchHHHHHHHHHhhhhh-hhhhhhcc-----------c-----cccccchHHHHHHHHHHHHHcCCCcccCcCHH
Confidence 997643322 222222111 11111100 0 00111235677899999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001152 1120 DLYEMFVARTS 1130 (1137)
Q Consensus 1120 EVL~~L~~~~~ 1130 (1137)
+|++++.....
T Consensus 296 ~l~~~L~~l~~ 306 (307)
T 2nru_A 296 KVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 99999987654
No 150
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.2e-38 Score=358.80 Aligned_cols=267 Identities=21% Similarity=0.288 Sum_probs=201.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|.+. +..||+|+...................+.+|+.++++++||||+++++++...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 87 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-- 87 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS--
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC--
Confidence 46999999999999999999985 46788888643322111111111122358899999999999999999998643
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 88 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~ 149 (322)
T 2ycf_A 88 -------------DYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149 (322)
T ss_dssp -------------SEEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred -------------ceEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEec
Confidence 35999999999999998864 346999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
++ ....+||+|||++......... ....||+.|+|||++.+. ....++.++|||||||++|+|+
T Consensus 150 ~~----~~~~~kl~Dfg~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~-~~~~~~~~~Di~slG~il~~l~ 213 (322)
T 2ycf_A 150 QE----EDCLIKITDFGHSKILGETSLM-----------RTLCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICL 213 (322)
T ss_dssp SS----SSCCEEECCCTTCEECCCCHHH-----------HHHHSCCTTCCHHHHHHT-TTTTCTTHHHHHHHHHHHHHHH
T ss_pred CC----CCCeEEEccCccceeccccccc-----------ccccCCcCccCchhhccC-CCCCCCchhhHHHHHHHHHHHH
Confidence 52 1246999999998765432111 123689999999998531 1246789999999999999999
Q ss_pred hCCCCCCCCCH-HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 TLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 TG~~Pf~~~~~-~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+|..||..... ..+...+..+.....+... ...++.+.+++.+||+.||.+|||+
T Consensus 214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~li~~~l~~dP~~Rps~ 269 (322)
T 2ycf_A 214 SGYPPFSEHRTQVSLKDQITSGKYNFIPEVW------------------------AEVSEKALDLVKKLLVVDPKARFTT 269 (322)
T ss_dssp HSSCSSCSTTCSSCHHHHHHHTCCCCCHHHH------------------------TTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred hCCCCCcccchHHHHHHHHHhCccccCchhh------------------------hhcCHHHHHHHHHHcccCHhhCCCH
Confidence 99999976432 2334444444332222111 1345669999999999999999999
Q ss_pred HHHHHHHHhh
Q 001152 1119 GDLYEMFVAR 1128 (1137)
Q Consensus 1119 ~EVL~~L~~~ 1128 (1137)
+|+++|+|+.
T Consensus 270 ~~~l~h~~~~ 279 (322)
T 2ycf_A 270 EEALRHPWLQ 279 (322)
T ss_dssp HHHHTSGGGC
T ss_pred HHHhhCcCcC
Confidence 9999999985
No 151
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=355.09 Aligned_cols=260 Identities=21% Similarity=0.331 Sum_probs=203.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCc------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFGSA------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 872 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~~------~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg 872 (1137)
....+|++.+.||+|+||.||+|.+... .||+|+.... ....... .+.+|+.+++.++||||+++++
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~ 113 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG---YTEKQRV----DFLGEAGIMGQFSHHNIIRLEG 113 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT---CCHHHHH----HHHHHHHHHHTCCCTTBCCEEE
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC---CCHHHHH----HHHHHHHHHHhCCCCCCCcEEE
Confidence 3456799999999999999999987432 3788875322 1222323 3488999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCC
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 952 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP 952 (1137)
++.... ..++||||+++++|.+++.. ....+++..++.|+.||+.||+|||++||+||||||
T Consensus 114 ~~~~~~--------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp 175 (333)
T 1mqb_A 114 VISKYK--------------PMMIITEYMENGALDKFLRE----KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAA 175 (333)
T ss_dssp EECSSS--------------SEEEEEECCTTEEHHHHHHH----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred EEecCC--------------CcEEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 987655 56999999999999999976 234699999999999999999999999999999999
Q ss_pred CCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001152 953 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1032 (1137)
Q Consensus 953 ~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1032 (1137)
+|||++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||
T Consensus 176 ~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG 237 (333)
T 1mqb_A 176 RNILVNSN-------LVCKVSDFGLSRVLEDDPEAT-------YTTSGGKIPIRWTAPEAISY----RKFTSASDVWSFG 237 (333)
T ss_dssp GGEEECTT-------CCEEECCCCC------------------------CCCGGGSCHHHHHS----CCCCHHHHHHHHH
T ss_pred heEEECCC-------CcEEECCCCcchhhccccccc-------cccCCCCccccccCchhccc----CCCCchhhhHHHH
Confidence 99999877 789999999997654322110 01112346789999999875 5688999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001152 1033 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1111 (1137)
Q Consensus 1033 viL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~D 1111 (1137)
|++|+|++ |..||......++...+..+..+..+. .+++.+.+++.+||+.|
T Consensus 238 ~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~ 290 (333)
T 1mqb_A 238 IVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPM---------------------------DCPSAIYQLMMQCWQQE 290 (333)
T ss_dssp HHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TCBHHHHHHHHHHTCSS
T ss_pred HHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcc---------------------------cCCHHHHHHHHHHcCCC
Confidence 99999999 999999888888877776654322211 33456999999999999
Q ss_pred CCCCCCHHHHHHHHHhh
Q 001152 1112 PTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1112 P~~RPSa~EVL~~L~~~ 1128 (1137)
|.+||++.++++++...
T Consensus 291 p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 291 RARRPKFADIVSILDKL 307 (333)
T ss_dssp TTTSCCHHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHHH
Confidence 99999999999998765
No 152
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=356.27 Aligned_cols=269 Identities=24% Similarity=0.369 Sum_probs=204.7
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEec
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 876 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~ 876 (1137)
...+|++.+.||+|+||.||+|++ .+..||+|+..... . ..+. +.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~---~~~~----~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--D---EEEE----IKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--S---TTHH----HHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--c---cHHH----HHHHHHHHHhccCCCCeeeeeeEEee
Confidence 356799999999999999999998 45788999864332 1 1122 37899999999 79999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.... ......++||||+++++|.+++... ....+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 93 ~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl 161 (326)
T 2x7f_A 93 KNPP--------GMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161 (326)
T ss_dssp CC----------CCCCEEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE
T ss_pred ccCc--------cccceEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEE
Confidence 4310 0112679999999999999999863 2246899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL 1035 (1137)
++.+ +.+||+|||++........ ......||+.|+|||++.... ....++.++|||||||++
T Consensus 162 ~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il 224 (326)
T 2x7f_A 162 LTEN-------AEVKLVDFGVSAQLDRTVG----------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITA 224 (326)
T ss_dssp ECTT-------CCEEECCCTTTC-----------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHH
T ss_pred EcCC-------CCEEEeeCcCceecCcCcc----------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHH
Confidence 9877 7899999999876543211 112346899999999986321 124678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|+|++|..||...........+.....+.... ...++.+.+++.+||..||.+|
T Consensus 225 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dp~~R 278 (326)
T 2x7f_A 225 IEMAEGAPPLCDMHPMRALFLIPRNPAPRLKS--------------------------KKWSKKFQSFIESCLVKNHSQR 278 (326)
T ss_dssp HHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSC--------------------------SCSCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHhCCCCCCCCcHHHHHHHhhcCccccCCc--------------------------cccCHHHHHHHHHHhccChhhC
Confidence 99999999998877766665554433222110 0334569999999999999999
Q ss_pred CCHHHHHHHHHhhcCC
Q 001152 1116 PTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~s 1131 (1137)
|+++++++|+|+....
T Consensus 279 ps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 279 PATEQLMKHPFIRDQP 294 (326)
T ss_dssp CCHHHHHTSHHHHCCT
T ss_pred CCHHHHhhChHHhhCc
Confidence 9999999999998654
No 153
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.7e-38 Score=356.21 Aligned_cols=264 Identities=25% Similarity=0.376 Sum_probs=207.3
Q ss_pred CCCCCCCCCceEeeeecccCceEEEEEEEC--CccE--EEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcce
Q 001152 795 GLDPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADA--AAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVE 869 (1137)
Q Consensus 795 ~~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~v--AVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVk 869 (1137)
.++...+.+|++.+.||+|+||.||+|++. +..+ ++|+.. ... .....+ ++.+|+.+++++ +||||++
T Consensus 18 ~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~--~~~-~~~~~~----~~~~E~~~l~~l~~hp~iv~ 90 (327)
T 1fvr_A 18 IYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK--EYA-SKDDHR----DFAGELEVLCKLGHHPNIIN 90 (327)
T ss_dssp CSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE--CC-------C----HHHHHHHHHTTCCCCTTBCC
T ss_pred ccccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeec--ccc-chHHHH----HHHHHHHHHHhccCCCchhh
Confidence 466677889999999999999999999974 3434 555533 211 122222 348899999999 8999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------cCCCCCCHHHHHHHHHHHHHHHH
Q 001152 870 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALV 938 (1137)
Q Consensus 870 llg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~-----------~~~~~ls~~~i~~I~~QIa~gL~ 938 (1137)
+++++.+.+ ..++||||+++++|.+++..... .....+++..++.|+.||+.||+
T Consensus 91 ~~~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 156 (327)
T 1fvr_A 91 LLGACEHRG--------------YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 156 (327)
T ss_dssp EEEEEEETT--------------EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHH
T ss_pred hceeeeeCC--------------ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 999998765 67999999999999999976310 11246999999999999999999
Q ss_pred HHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccC
Q 001152 939 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1018 (1137)
Q Consensus 939 yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1018 (1137)
|||++||+||||||+|||++.+ +.+||+|||+++....... .....+++.|+|||++.+
T Consensus 157 ~LH~~~ivH~dlkp~NIl~~~~-------~~~kL~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~--- 215 (327)
T 1fvr_A 157 YLSQKQFIHRDLAARNILVGEN-------YVAKIADFGLSRGQEVYVK-----------KTMGRLPVRWMAIESLNY--- 215 (327)
T ss_dssp HHHHTTEECSCCSGGGEEECGG-------GCEEECCTTCEESSCEECC-----------C----CCTTTCCHHHHHH---
T ss_pred HHHhCCccCCCCccceEEEcCC-------CeEEEcccCcCcccccccc-----------ccCCCCCccccChhhhcc---
Confidence 9999999999999999999887 7899999999864332111 113357889999999875
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001152 1019 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1097 (1137)
Q Consensus 1019 ~~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1137)
..++.++|||||||++|+|++ |..||.+....++...+..+..+..+. ..+
T Consensus 216 -~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~ 267 (327)
T 1fvr_A 216 -SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL---------------------------NCD 267 (327)
T ss_dssp -CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCT---------------------------TBC
T ss_pred -ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCC---------------------------CCC
Confidence 457899999999999999998 999999888777776665443222111 344
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001152 1098 SFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1098 ~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
+.+.+++.+||+.||.+|||++|+++++...
T Consensus 268 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 268 DEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 5699999999999999999999999998875
No 154
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.4e-38 Score=350.51 Aligned_cols=263 Identities=20% Similarity=0.330 Sum_probs=198.6
Q ss_pred CCCCceEeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCccee
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 870 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~---------~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkl 870 (1137)
...+|++.+.||+|+||+||+|.+.. ..+|+|+..... .... .++.+|+.++++++||||+++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~----~~~~~E~~~l~~l~h~~iv~~ 77 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYS----ESFFEAASMMSKLSHKHLVLN 77 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGH----HHHHHHHHHHHTSCCTTBCCE
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHH----HHHHHHHHHHHhCCCCCEeEE
Confidence 45679999999999999999998753 348888753221 1122 335889999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Q 001152 871 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 950 (1137)
Q Consensus 871 lg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDL 950 (1137)
++++.+.+ ..++||||+++++|.+++... ...+++..++.|+.||+.||+|||++||+||||
T Consensus 78 ~~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dl 139 (289)
T 4fvq_A 78 YGVCVCGD--------------ENILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLEENTLIHGNV 139 (289)
T ss_dssp EEEECCTT--------------CCEEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEEEEeCC--------------CCEEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCc
Confidence 99998765 459999999999999999862 234899999999999999999999999999999
Q ss_pred CCCCeEecccccc-CCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHH
Q 001152 951 KSENILIDLERKK-ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW 1029 (1137)
Q Consensus 951 KP~NILld~~~~~-~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVW 1029 (1137)
||+|||++.+... ....+.+||+|||++....... ...||+.|+|||++.+ ...++.++|||
T Consensus 140 kp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~y~aPE~~~~---~~~~~~~~Diw 202 (289)
T 4fvq_A 140 CAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD--------------ILQERIPWVPPECIEN---PKNLNLATDKW 202 (289)
T ss_dssp CGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHH--------------HHHHTTTTSCHHHHHC---GGGCCHHHHHH
T ss_pred CcceEEEecCCcccccccceeeeccCcccccccCcc--------------ccCCcCcccCHHHhCC---CCCCCchhHHH
Confidence 9999999877310 0112339999999986543221 2357889999999874 24578999999
Q ss_pred HHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001152 1030 SYGCLLLELLTL-QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1108 (1137)
Q Consensus 1030 SLGviL~ELLTG-~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL 1108 (1137)
||||++|+|++| ..||................ .++. ..++++.+++.+||
T Consensus 203 slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~--~~~~---------------------------~~~~~l~~li~~~l 253 (289)
T 4fvq_A 203 SFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH--QLPA---------------------------PKAAELANLINNCM 253 (289)
T ss_dssp HHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--CCCC---------------------------CSSCTTHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCccccchHHHHHHhhccC--CCCC---------------------------CCCHHHHHHHHHHc
Confidence 999999999995 55555555444433333211 1110 11223889999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhcCCCCC
Q 001152 1109 EENPTERPTAGDLYEMFVARTSSSIS 1134 (1137)
Q Consensus 1109 ~~DP~~RPSa~EVL~~L~~~~~ss~s 1134 (1137)
+.||.+|||+.|+++++...-++..+
T Consensus 254 ~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 254 DYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp CSSGGGSCCHHHHHHHHHTCC-----
T ss_pred CCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 99999999999999999988765544
No 155
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.4e-38 Score=367.02 Aligned_cols=284 Identities=19% Similarity=0.236 Sum_probs=195.2
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|.+. +..||+|+. ..........+. +.+|+.+++.++||||+++++++.....
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~--~~~~~~~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 102 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL--SRPFQSIIHAKR----TYRELRLLKHMKHENVIGLLDVFTPARS 102 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEEC--SSTTSSHHHHHH----HHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEe--CccccCHHHHHH----HHHHHHHHHhCCCCCCCcEEEEEecCCc
Confidence 68999999999999999999975 466777763 332222333333 4889999999999999999999875421
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
. ......++||||+ +++|.++++. ..+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 103 ~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~ 167 (367)
T 2fst_X 103 L--------EEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167 (367)
T ss_dssp G--------GGCCCCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred c--------ccCCeEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECC
Confidence 1 1122569999999 6999998864 36999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+++...... ....||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 168 ~-------~~~kL~DFG~a~~~~~~~-------------~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~ell 224 (367)
T 2fst_X 168 D-------CELKILDFGLARHTADEM-------------TGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAELL 224 (367)
T ss_dssp T-------CCEEECC----------------------------CCCTTCCHHHHTT---CCSCCTTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeeccccccccccC-------------CCcCcCcCccChHHHcC---CcCCCchhhHHHHHHHHHHHH
Confidence 7 789999999987543211 13468999999999874 246889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccC---CCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG---SGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|+.||.+.+..+....+...........+............+.. ............++.+.+|+.+||+.||.+||
T Consensus 225 ~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~ 304 (367)
T 2fst_X 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 304 (367)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCc
Confidence 999999998887776666432211111111111000000000000 01111111224567799999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001152 1117 TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~ 1129 (1137)
|++|+++|+|+..
T Consensus 305 t~~e~L~hp~~~~ 317 (367)
T 2fst_X 305 TAAQALAHAYFAQ 317 (367)
T ss_dssp CHHHHHTSGGGTT
T ss_pred CHHHHhcChhhhh
Confidence 9999999999975
No 156
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=349.41 Aligned_cols=266 Identities=21% Similarity=0.297 Sum_probs=198.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||+||+|.+. +..+|+|+.. . ......+. +.+|+.++++++||||+++++++.+..
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~--~--~~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~~ 80 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELI--R--FDEETQRT----FLKEVKVMRCLEHPNVLKFIGVLYKDK 80 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEES--C--CCHHHHHH----HHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEec--c--CCHHHHHH----HHHHHHHHHhCCCcCcccEEEEEecCC
Confidence 467999999999999999999985 4667777642 1 12333333 489999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.++++. ....+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 81 --------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~ 142 (310)
T 3s95_A 81 --------------RLNFITEYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR 142 (310)
T ss_dssp --------------EEEEEEECCTTCBHHHHHHH----CCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEC
T ss_pred --------------eeEEEEEecCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEEC
Confidence 67999999999999999976 234699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccc----cCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA----HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~----~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
.+ +.+||+|||++............. ...........||+.|+|||++.+ ..++.++|||||||+
T Consensus 143 ~~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~~ 211 (310)
T 3s95_A 143 EN-------KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING----RSYDEKVDVFSFGIV 211 (310)
T ss_dssp TT-------SCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHHH
T ss_pred CC-------CCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcC----CCCCcHHHHHHHHHH
Confidence 87 789999999997654322110000 000001114579999999999975 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|+|++|..||.......... ........... ....+++.+.+++.+||+.||++
T Consensus 212 l~el~~g~~~~~~~~~~~~~~------~~~~~~~~~~~-------------------~~~~~~~~l~~li~~~l~~dP~~ 266 (310)
T 3s95_A 212 LCEIIGRVNADPDYLPRTMDF------GLNVRGFLDRY-------------------CPPNCPPSFFPITVRCCDLDPEK 266 (310)
T ss_dssp HHHHHHTCCSSTTTSCBCTTS------SBCHHHHHHHT-------------------CCTTCCTTHHHHHHHHTCSSGGG
T ss_pred HHHHhcCCCCCcchhhhHHHH------hhhhhcccccc-------------------CCCCCCHHHHHHHHHHccCChhh
Confidence 999999999986532110000 00000000000 00133445899999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001152 1115 RPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~ 1128 (1137)
|||+.++++.+...
T Consensus 267 Rps~~~l~~~L~~l 280 (310)
T 3s95_A 267 RPSFVKLEHWLETL 280 (310)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHH
Confidence 99999999988765
No 157
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7.3e-38 Score=347.05 Aligned_cols=256 Identities=21% Similarity=0.325 Sum_probs=202.1
Q ss_pred CCCCceEeeeecccCceEEEEEEECC---c--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGS---A--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~---~--~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
...+|++.+.||+|+||.||+|.+.. . .+|+|+.. ... .....+ ++.+|+.+++.++||||+++++++
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~--~~~-~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~ 82 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK--KDC-TLDNKE----KFMSEAVIMKNLDHPHIVKLIGII 82 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECC--TTS-CHHHHH----HHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecc--ccc-CchHHH----HHHHHHHHHHhCCCCCcceEEEEE
Confidence 45689999999999999999998743 2 36777633 221 223333 348899999999999999999997
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
.+. ..++||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|
T Consensus 83 ~~~---------------~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N 143 (281)
T 3cc6_A 83 EEE---------------PTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRN 143 (281)
T ss_dssp CSS---------------SCEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred cCC---------------CCEEEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccce
Confidence 643 238999999999999999762 2458999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
|+++.+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||++
T Consensus 144 il~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 203 (281)
T 3cc6_A 144 ILVASP-------ECVKLGDFGLSRYIEDEDYY---------KASVTRLPIKWMSPESINF----RRFTTASDVWMFAVC 203 (281)
T ss_dssp EEEEET-------TEEEECCCCGGGCC------------------CCCCCGGGCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEECCC-------CcEEeCccCCCccccccccc---------ccccCCCCcceeCchhhcc----CCCCchhccHHHHHH
Confidence 999987 78999999998765432211 1123357889999999875 468899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|+|++ |..||......+....+..+..+..+. .+++.+.+++.+||+.||.
T Consensus 204 l~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~ 256 (281)
T 3cc6_A 204 MWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD---------------------------LCPPVLYTLMTRCWDYDPS 256 (281)
T ss_dssp HHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHccCCch
Confidence 999998 999998776666666665544322211 2345699999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001152 1114 ERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~ 1128 (1137)
+|||+.|+++++...
T Consensus 257 ~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 257 DRPRFTELVCSLSDV 271 (281)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999998764
No 158
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=350.79 Aligned_cols=259 Identities=25% Similarity=0.380 Sum_probs=204.5
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
....+|++.+.||+|+||.||+|.+. +..||+|+..... ..+. +.+|+.+++.++||||+++++++..
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~ 95 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQE----IIKEISIMQQCDSPHVVKYYGSYFK 95 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHH----HHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHH----HHHHHHHHHhCCCCCCccEEEEEEe
Confidence 34567999999999999999999985 5778888764321 1122 3789999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.. ..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+
T Consensus 96 ~~--------------~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil 157 (314)
T 3com_A 96 NT--------------DLWIVMEYCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNIL 157 (314)
T ss_dssp TT--------------EEEEEEECCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred CC--------------EEEEEeecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEE
Confidence 65 679999999999999998741 246999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||+++|
T Consensus 158 ~~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~ 216 (314)
T 3com_A 158 LNTE-------GHAKLADFGVAGQLTDTMA----------KRNTVIGTPFWMAPEVIQE----IGYNCVADIWSLGITAI 216 (314)
T ss_dssp ECTT-------CCEEECCCTTCEECBTTBS----------CBCCCCSCGGGCCHHHHSS----SCBCTTHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeecccchhhhhhcc----------ccCccCCCCCccChhhcCC----CCCCccccHHHHHHHHH
Confidence 9877 7899999999876543211 1123468999999999875 46789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|++|..||...........+.....+.+.. ....++.+.+++.+||+.||.+||
T Consensus 217 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rp 271 (314)
T 3com_A 217 EMAEGKPPYADIHPMRAIFMIPTNPPPTFRK-------------------------PELWSDNFTDFVKQCLVKSPEQRA 271 (314)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSS-------------------------GGGSCHHHHHHHHHHTCSCTTTSC
T ss_pred HHHhCCCCCCCCChHHHHHHHhcCCCcccCC-------------------------cccCCHHHHHHHHHHccCChhhCc
Confidence 9999999998877766555554433222110 013355699999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001152 1117 TAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~s 1131 (1137)
|+.++++|+|+....
T Consensus 272 t~~~ll~~~~~~~~~ 286 (314)
T 3com_A 272 TATQLLQHPFVRSAK 286 (314)
T ss_dssp CHHHHTTSHHHHTCC
T ss_pred CHHHHHhCHHHhcCC
Confidence 999999999998654
No 159
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=357.39 Aligned_cols=261 Identities=19% Similarity=0.318 Sum_probs=200.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEE--ecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVR--TLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~--~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
....+|++.+.||+|+||+||+|.+. +..+++|+. ...... .....+. +.+|+.++++++||||+++++++
T Consensus 12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~ 86 (327)
T 3lzb_A 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKE----ILDEAYVMASVDNPHVCRLLGIC 86 (327)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHH----HHHHHHHHTTCCBTTBCCCCEEE
T ss_pred cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHH----HHHHHHHHHhCCCCCeeEEEEEE
Confidence 34578999999999999999999984 344544332 121111 1112223 47899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
... ..++||||+++|+|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 87 ~~~---------------~~~~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N 147 (327)
T 3lzb_A 87 LTS---------------TVQLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 147 (327)
T ss_dssp ESS---------------SEEEEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred ecC---------------CceEEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHH
Confidence 864 358999999999999999762 3469999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 148 Il~~~~-------~~~kL~DfG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~i 208 (327)
T 3lzb_A 148 VLVKTP-------QHVKITDFGLAKLLGAEEKE--------YHAEGGKVPIKWMALESILH----RIYTHQSDVWSYGVT 208 (327)
T ss_dssp EEEEET-------TEEEECCTTC------------------------CCCGGGSCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEccCcceeEccCcccc--------ccccCCCccccccCHHHHcC----CCCChHHHHHHHHHH
Confidence 999887 78999999999765432211 11112357889999999986 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|+|++ |..||.+....++...+..+.....+. .++.++.+++.+||+.||.
T Consensus 209 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 261 (327)
T 3lzb_A 209 VWELMTFGSKPYDGIPASEISSILEKGERLPQPP---------------------------ICTIDVYMIMRKCWMIDAD 261 (327)
T ss_dssp HHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TBCHHHHHHHHHHTCSSGG
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCChh
Confidence 999999 999999887777777766554332221 3345699999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001152 1114 ERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~~ 1129 (1137)
+|||+.|+++.+....
T Consensus 262 ~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 262 SRPKFRELIIEFSKMA 277 (327)
T ss_dssp GSCCHHHHHHHHHHHH
T ss_pred HCcCHHHHHHHHHHHH
Confidence 9999999999987653
No 160
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.4e-38 Score=353.53 Aligned_cols=262 Identities=21% Similarity=0.343 Sum_probs=209.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 873 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~ 873 (1137)
..+|++.+.||+|+||.||+|.+. +..+|+|+.. .. ....... ++.+|+.+++.++||||++++++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~--~~-~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EA-ASMRERI----EFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECC--TT-SCHHHHH----HHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecc--cc-cCHHHHH----HHHHHHHHHHhcCCCCEeeeEEE
Confidence 357999999999999999999874 3567777643 21 1222222 34889999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 948 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-----~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHr 948 (1137)
+.+.. ..++||||+++++|.++++..... ....+++..++.|+.||+.||+|||++||+||
T Consensus 97 ~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~ 162 (322)
T 1p4o_A 97 VSQGQ--------------PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162 (322)
T ss_dssp ECSSS--------------SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCS
T ss_pred EccCC--------------ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence 97665 459999999999999999764321 12357999999999999999999999999999
Q ss_pred cCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhH
Q 001152 949 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1028 (1137)
Q Consensus 949 DLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1028 (1137)
||||+|||++.+ +.+||+|||++.......... ......+|+.|+|||++.+ ..++.++||
T Consensus 163 dikp~NIli~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di 223 (322)
T 1p4o_A 163 DLAARNCMVAED-------FTVKIGDFGMTRDIYETDYYR--------KGGKGLLPVRWMSPESLKD----GVFTTYSDV 223 (322)
T ss_dssp CCSGGGEEECTT-------CCEEECCTTCCCGGGGGGCEE--------GGGSSEECGGGCCHHHHHH----CCCCHHHHH
T ss_pred CCccceEEEcCC-------CeEEECcCccccccccccccc--------cccCCCCCCCccChhhhcc----CCCCchhhH
Confidence 999999999977 789999999987654322110 0112357889999999876 468899999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001152 1029 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1107 (1137)
Q Consensus 1029 WSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~C 1107 (1137)
|||||++|+|++ |..||.+....++...+..+..+..+. .+++.+.+++.+|
T Consensus 224 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~ 276 (322)
T 1p4o_A 224 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD---------------------------NCPDMLFELMRMC 276 (322)
T ss_dssp HHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCC---------------------------CCCHHHHHHHHHH
Confidence 999999999999 899999888887777776554332221 3445699999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhc
Q 001152 1108 TEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1108 L~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
|+.||.+|||+.|+++++....
T Consensus 277 l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 277 WQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TCSSGGGSCCHHHHHHHHGGGS
T ss_pred cCCCcccCcCHHHHHHHHHHhh
Confidence 9999999999999999987753
No 161
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.7e-37 Score=353.03 Aligned_cols=264 Identities=21% Similarity=0.220 Sum_probs=201.3
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~~~ 878 (1137)
.+|++.+.||+|+||.||+|++ .+..||+|+...+... + ++.+|+.+++++ +||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~----~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 78 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA------P----QLHLEYRFYKQLGSGDGIPQVYYFGPCGK 78 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS------C----CHHHHHHHHHHHCSCTTSCCEEEEEEETT
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch------H----HHHHHHHHHHHhhCCCCCCEEEEEEecCC
Confidence 5799999999999999999996 4578999986433211 1 237799999999 8999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+ +++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 79 --------------~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 139 (330)
T 2izr_A 79 --------------YNAMVLELL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG 139 (330)
T ss_dssp --------------EEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred --------------ccEEEEEeC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec
Confidence 679999999 89999999862 34799999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+.. .....+||+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 140 ~~~~--~~~~~~kl~DFg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el 210 (330)
T 2izr_A 140 RPGN--KTQQVIHIIDFALAKEYIDPETKKH---IPYREHKSLTGTARYMSINTHLG----KEQSRRDDLEALGHMFMYF 210 (330)
T ss_dssp CGGG--TCTTSEEECCCTTCEESBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHHH
T ss_pred cCCC--CCCceEEEEEcccceeeecCCCCcc---ccccccCCcCCCccccChHHHcC----CCCCchhHHHHHHHHHHHH
Confidence 7721 1122399999999986544321110 01111235579999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCC---HHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1039 LTLQVPYMGLS---ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1039 LTG~~Pf~~~~---~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
++|..||.+.. ..+....+.....+.....+ ....+ ++.+++.+||+.||.+|
T Consensus 211 l~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------------------~~~~p-~~~~li~~~l~~~p~~R 266 (330)
T 2izr_A 211 LRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL-----------------------CENFP-EMATYLRYVRRLDFFEK 266 (330)
T ss_dssp HHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHH-----------------------TTTCH-HHHHHHHHHHHCCTTCC
T ss_pred hcCCCCccccccccHHHHHHHHHhhhccCCHHHH-----------------------hccCh-HHHHHHHHHHhCCCCCC
Confidence 99999998743 33333333221111100000 01234 79999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001152 1116 PTAGDLYEMFVA 1127 (1137)
Q Consensus 1116 PSa~EVL~~L~~ 1127 (1137)
|++++|++.+..
T Consensus 267 P~~~~l~~~l~~ 278 (330)
T 2izr_A 267 PDYDYLRKLFTD 278 (330)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999987754
No 162
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.1e-38 Score=365.94 Aligned_cols=260 Identities=21% Similarity=0.316 Sum_probs=198.4
Q ss_pred CCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC--CCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~--HpNIVkllg~~~~~~ 878 (1137)
.+|++.+.||+|+||.||+|.+. +..||||+..... ......+. +.+|+.+|++++ |||||++++++...+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~--~~~~~~~~----~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDS----YRNEIAYLNKLQQHSDKIIRLYDYEITDQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT--CCHHHHHH----HHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc--ccHHHHHH----HHHHHHHHHHcccCCCeEEEEEEEEecCC
Confidence 35999999999999999999875 4678999865432 22333334 489999999997 599999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||| +.+++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 130 --------------~~~lv~E-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~ 189 (390)
T 2zmd_A 130 --------------YIYMVME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 189 (390)
T ss_dssp --------------EEEEEEE-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES
T ss_pred --------------EEEEEEe-cCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE
Confidence 5799999 557999999986 24689999999999999999999999999999999999995
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc-------CCCCCCchhhHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSY 1031 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVWSL 1031 (1137)
+ +.+||+|||+++........ ......+||+.|+|||++.+.. ....++.++|||||
T Consensus 190 -~-------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSl 253 (390)
T 2zmd_A 190 -D-------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253 (390)
T ss_dssp -S-------SCEEECCCSSSCCC-----------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHH
T ss_pred -C-------CeEEEEecCccccccCCCcc--------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHH
Confidence 3 57999999999765432111 1112446999999999987421 11368899999999
Q ss_pred HHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCC-CchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001152 1032 GCLLLELLTLQVPYMGLS-ELEIHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1109 (1137)
Q Consensus 1032 GviL~ELLTG~~Pf~~~~-~~el~~~I~~g~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~ 1109 (1137)
||++|||++|+.||.... .......+...... .++. ..++++.+|+.+||+
T Consensus 254 Gvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~L~ 306 (390)
T 2zmd_A 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---------------------------IPEKDLQDVLKCCLK 306 (390)
T ss_dssp HHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCC---------------------------CSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCc---------------------------cchHHHHHHHHHHcc
Confidence 999999999999997643 23333333322110 0000 123458999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001152 1110 ENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1110 ~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
.||.+|||+.|+++|+|+...
T Consensus 307 ~dP~~Rps~~ell~hp~~~~~ 327 (390)
T 2zmd_A 307 RDPKQRISIPELLAHPYVQIQ 327 (390)
T ss_dssp SSTTTSCCHHHHHTSHHHHSC
T ss_pred cChhhCCCHHHHhhCcCcccc
Confidence 999999999999999999754
No 163
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.2e-37 Score=359.67 Aligned_cols=289 Identities=18% Similarity=0.218 Sum_probs=211.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|.+. +..||+|+.. .. ......+ ++.+|+.++++++||||+++++++.....
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~--~~-~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 99 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS--PF-EHQTYCQ----RTLREIKILLRFRHENIIGINDIIRAPTI 99 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC--CT-TCHHHHH----HHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEec--cc-cCcHHHH----HHHHHHHHHHhcCCCCCccceeEEecCCc
Confidence 47999999999999999999985 4567887643 21 1122223 34889999999999999999999876431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
. .....++||||+. ++|.++++. ..+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 100 ~---------~~~~~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~ 163 (364)
T 3qyz_A 100 E---------QMKDVYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 163 (364)
T ss_dssp T---------TCCCEEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred c---------ccceEEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECC
Confidence 1 1225799999997 799999875 35999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++.......... .......||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 164 ~-------~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~ell 226 (364)
T 3qyz_A 164 T-------CDLKICDFGLARVADPDHDHT-------GFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEML 226 (364)
T ss_dssp T-------CCEEECCCTTCEECCGGGCBC-------CTTCCCCSCGGGCCHHHHHT---BCSCSTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEeCcceEecCCCCCcc-------ccccccccccCCCCCHHhcC---CCCCCcchhHHHHHHHHHHHH
Confidence 7 789999999997654322110 11123479999999998764 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhccccccc-cccc--CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHE-VAQS--GSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|+.||.+....+....+...........+.......... .... .............++++.+|+.+||+.||.+||
T Consensus 227 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 306 (364)
T 3qyz_A 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306 (364)
T ss_dssp HSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred HCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCC
Confidence 9999999877766666553322111111111100000000 0000 000111111224567799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|++|+++|+|+...
T Consensus 307 t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 307 EVEQALAHPYLEQY 320 (364)
T ss_dssp CHHHHHTSGGGTTT
T ss_pred CHHHHhcCcchhhc
Confidence 99999999999854
No 164
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.3e-38 Score=347.86 Aligned_cols=262 Identities=24% Similarity=0.289 Sum_probs=204.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
+.+|++.+.||+|+||.||+|.+. +..+|+|+....... ...+ .+.+|+.+++.++||||+++++++.+..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 78 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPE----NIKKEICINKMLNHENVVKFYGHRREGN 78 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT---THHH----HHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch---hhhH----HHHHHHHHHHhcCCCCceeeeeEEEcCC
Confidence 357999999999999999999985 577899886543321 1222 3478999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 79 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~ 139 (276)
T 2yex_A 79 --------------IQYLFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139 (276)
T ss_dssp --------------EEEEEEECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------EEEEEEEecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc
Confidence 66999999999999998754 34699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||.+......... .......||+.|+|||++.+. ..++.++||||||+++|+|
T Consensus 140 ~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~il~~l 201 (276)
T 2yex_A 140 ER-------DNLKISDFGLATVFRYNNRE--------RLLNKMCGTLPYVAPELLKRR---EFHAEPVDVWSCGIVLTAM 201 (276)
T ss_dssp TT-------CCEEECCCTTCEECEETTEE--------CCBCCCCSCGGGCCGGGGTCS---SBCHHHHHHHHHHHHHHHH
T ss_pred cC-------CCEEEeeCCCccccCCCcch--------hcccCCccccCccChHHHhcC---CCCCCcchHHHHHHHHHHH
Confidence 77 78999999998765432211 011234689999999998751 2347899999999999999
Q ss_pred HhCCCCCCCCCHH-HHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1039 LTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~-el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
++|..||...... .....+..... ... .....++.+.+++.+||+.||.+|||
T Consensus 202 ~~g~~p~~~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~~~~~~li~~~l~~~p~~Rps 255 (276)
T 2yex_A 202 LAGELPWDQPSDSCQEYSDWKEKKT-YLN-------------------------PWKKIDSAPLALLHKILVENPSARIT 255 (276)
T ss_dssp HHSSCCCSCSCTTSHHHHHHHTTCT-TST-------------------------TGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred HhCCCCCCCCchHHHHHHHhhhccc-ccC-------------------------chhhcCHHHHHHHHHHCCCCchhCCC
Confidence 9999999765432 12222222111 000 00134566899999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001152 1118 AGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1118 a~EVL~~L~~~~~ss 1132 (1137)
++|+++|+|+.....
T Consensus 256 ~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 256 IPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHHTTCTTTTCCCC
T ss_pred HHHHhcCccccChhh
Confidence 999999999986543
No 165
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-37 Score=352.39 Aligned_cols=277 Identities=20% Similarity=0.238 Sum_probs=203.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeeEe
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 875 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpNIVkllg~~~ 875 (1137)
....+|++.+.||+|+||+||+|.+ .+..||+|+.... ..+. +.+|+.++++++ ||||+++++++.
T Consensus 33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~----~~~E~~~l~~l~~~~~i~~~~~~~~ 101 (330)
T 3nsz_A 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKK----IKREIKILENLRGGPNIITLADIVK 101 (330)
T ss_dssp EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHH----HHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHH----HHHHHHHHHHcCCCCCEEEeeeeec
Confidence 3457899999999999999999987 4577888885321 1122 378999999997 999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+... ...++||||+++++|.++++. +++..+..|+.||+.||+|||++||+||||||+||
T Consensus 102 ~~~~------------~~~~lv~e~~~~~~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Ni 161 (330)
T 3nsz_A 102 DPVS------------RTPALVFEHVNNTDFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 161 (330)
T ss_dssp CTTT------------CCEEEEEECCCCCCHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred cCCC------------CceEEEEeccCchhHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHE
Confidence 6431 157999999999999998743 88999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.++ ..+||+|||+++....... .....||+.|+|||++.+ ...++.++|||||||++
T Consensus 162 l~~~~~------~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il 221 (330)
T 3nsz_A 162 MIDHEH------RKLRLIDWGLAEFYHPGQE-----------YNVRVASRYFKGPELLVD---YQMYDYSLDMWSLGCML 221 (330)
T ss_dssp EEETTT------TEEEECCCTTCEECCTTCC-----------CCSCCSCGGGCCHHHHTT---CCCCCTHHHHHHHHHHH
T ss_pred EEcCCC------CEEEEEeCCCceEcCCCCc-----------cccccccccccChhhhcC---CCcCCchhhHHHHHHHH
Confidence 998662 3799999999975543211 123468999999999864 24688999999999999
Q ss_pred HHHHhCCCCCCCC-CHHHHHHHH-------------HcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001152 1036 LELLTLQVPYMGL-SELEIHDLI-------------QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1101 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~-~~~el~~~I-------------~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1101 (1137)
|+|++|..||... ...+....+ ....... ...+........ ................++++.
T Consensus 222 ~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 297 (330)
T 3nsz_A 222 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL-DPRFNDILGRHS---RKRWERFVHSENQHLVSPEAL 297 (330)
T ss_dssp HHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC-CTHHHHHHCCCC---CCCGGGGCCTTTGGGCCHHHH
T ss_pred HHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc-ccchhhhhhhcc---ccchhhhccccccccCCHHHH
Confidence 9999999999542 332222222 1111110 000000000000 000000111111224677899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1102 DVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1102 dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
+|+.+||+.||.+|||++|+++|+|+...
T Consensus 298 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 298 DFLDKLLRYDHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence 99999999999999999999999999854
No 166
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3e-38 Score=359.34 Aligned_cols=261 Identities=20% Similarity=0.253 Sum_probs=205.7
Q ss_pred CceEe-eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeeEecCC
Q 001152 803 SLSSC-DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 878 (1137)
Q Consensus 803 ~y~l~-~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpNIVkllg~~~~~~ 878 (1137)
+|.+. +.||+|+||+||+|.+. +..||+|+....... ..... .+.+|+.+++.+. ||||+++++++.+..
T Consensus 29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~----~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG--QDCRA----EILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT--EECHH----HHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHH----HHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 46776 89999999999999985 578999986543221 11222 3478999999996 799999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 103 --------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~ 165 (327)
T 3lm5_A 103 --------------EIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165 (327)
T ss_dssp --------------EEEEEEECCTTEEGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEES
T ss_pred --------------eEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEe
Confidence 67999999999999998753 2235699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
... ..+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 166 ~~~----~~~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l 226 (327)
T 3lm5_A 166 SIY----PLGDIKIVDFGMSRKIGHACE-----------LREIMGTPEYLAPEILNY----DPITTATDMWNIGIIAYML 226 (327)
T ss_dssp CBT----TBCCEEECCGGGCEEC--------------------CCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHH
T ss_pred cCC----CCCcEEEeeCccccccCCccc-----------cccccCCcCccCCeeecC----CCCCchhhHHHHHHHHHHH
Confidence 731 126799999999976543211 113469999999999875 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+....+....+........... ....++.+.+++.+||+.||.+|||+
T Consensus 227 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~~~li~~~L~~dP~~Rpt~ 282 (327)
T 3lm5_A 227 LTHTSPFVGEDNQETYLNISQVNVDYSEET------------------------FSSVSQLATDFIQSLLVKNPEKRPTA 282 (327)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHTCCCCCTTT------------------------TTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred HhCCCCCCCCCchHHHHHHHhcccccCchh------------------------hcccCHHHHHHHHHHcCCChhhCcCH
Confidence 999999998888777766655432211110 01345669999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001152 1119 GDLYEMFVART 1129 (1137)
Q Consensus 1119 ~EVL~~L~~~~ 1129 (1137)
+|+++|+|++.
T Consensus 283 ~~ll~h~~~~~ 293 (327)
T 3lm5_A 283 EICLSHSWLQQ 293 (327)
T ss_dssp HHHTTCGGGCC
T ss_pred HHHhCCHhhcc
Confidence 99999999964
No 167
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.4e-38 Score=352.69 Aligned_cols=263 Identities=28% Similarity=0.435 Sum_probs=206.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
-.+|++.+.||+|+||.||+|.+. +..+|+|+..... ....+. +.+|+.+++.++||||+++++++....
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELED----YIVEIEILATCDHPYIVKLLGAYYHDG 89 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHH----HHHHHHHHHHCCCTTBCCEEEEEECC-
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC----HHHHHH----HHHHHHHHhcCCCCCEeeeeeeeeeCC
Confidence 467999999999999999999996 5678888753221 112223 478999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 90 --------------~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~ 151 (302)
T 2j7t_A 90 --------------KLWIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT 151 (302)
T ss_dssp --------------CEEEEEECCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC
T ss_pred --------------eEEEEEEeCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC
Confidence 569999999999999998752 24699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~E 1037 (1137)
.+ +.+||+|||++......... .....||+.|+|||++.... ....++.++||||||+++|+
T Consensus 152 ~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~ 214 (302)
T 2j7t_A 152 LE-------GDIRLADFGVSAKNLKTLQK----------RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE 214 (302)
T ss_dssp TT-------SCEEECCCHHHHHHHHHHHC---------------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEECCCCccccccccc----------cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHH
Confidence 77 78999999987543221110 11346899999999985211 13567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
|++|..||...+.......+.....+.... ....+..+.+++.+||+.||.+|||
T Consensus 215 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rps 269 (302)
T 2j7t_A 215 MAQIEPPHHELNPMRVLLKIAKSDPPTLLT-------------------------PSKWSVEFRDFLKIALDKNPETRPS 269 (302)
T ss_dssp HHHSSCTTTTSCHHHHHHHHHHSCCCCCSS-------------------------GGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HhcCCCCCccCCHHHHHHHHhccCCcccCC-------------------------ccccCHHHHHHHHHHcccChhhCCC
Confidence 999999999888777666665544332110 0134556999999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001152 1118 AGDLYEMFVARTSS 1131 (1137)
Q Consensus 1118 a~EVL~~L~~~~~s 1131 (1137)
++++++|+|+....
T Consensus 270 ~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 270 AAQLLEHPFVSSIT 283 (302)
T ss_dssp HHHHTTSTTTTTCC
T ss_pred HHHHhcChHHhhhc
Confidence 99999999998643
No 168
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-38 Score=352.71 Aligned_cols=253 Identities=25% Similarity=0.469 Sum_probs=196.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
....+|++.+.||+|+||+||+|++.+..+|+|+.. . ....+. +.+|+.++++++||||+++++++.+.
T Consensus 5 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~--~----~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~- 73 (307)
T 2eva_A 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--S----ESERKA----FIVELRQLSRVNHPNIVKLYGACLNP- 73 (307)
T ss_dssp CCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECS--S----TTHHHH----HHHHHHHHHHCCCTTBCCEEEBCTTT-
T ss_pred CCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEec--C----hhHHHH----HHHHHHHHhcCCCCCcCeEEEEEcCC-
Confidence 456789999999999999999999999999999742 1 122233 48899999999999999999987632
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCCCCe
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---KHIMHRDIKSENI 955 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs---~gIIHrDLKP~NI 955 (1137)
.++||||+++++|.+++... .....+++..++.++.||+.||+|||+ +||+||||||+||
T Consensus 74 ---------------~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NI 136 (307)
T 2eva_A 74 ---------------VCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL 136 (307)
T ss_dssp ---------------TEEEEECCTTCBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGE
T ss_pred ---------------cEEEEEcCCCCCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHE
Confidence 38999999999999999752 112357899999999999999999999 8999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+. ..+||+|||++....... ....||+.|+|||++.+ ..++.++|||||||++
T Consensus 137 ll~~~~------~~~kl~Dfg~~~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 193 (307)
T 2eva_A 137 LLVAGG------TVLKICDFGTACDIQTHM-------------TNNKGSAAWMAPEVFEG----SNYSEKCDVFSWGIIL 193 (307)
T ss_dssp EEETTT------TEEEECCCCC-------------------------CCTTSSCHHHHTC----CCCCTHHHHHHHHHHH
T ss_pred EEeCCC------CEEEEccccccccccccc-------------ccCCCCCceEChhhhCC----CCCCcHHHHHHHHHHH
Confidence 998762 248999999986543211 12358999999999875 5688999999999999
Q ss_pred HHHHhCCCCCCCCC--HHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1036 LELLTLQVPYMGLS--ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~--~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
|+|++|+.||.... ...+...+..+..+.... ..++.+.+++.+||+.||.
T Consensus 194 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 246 (307)
T 2eva_A 194 WEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK---------------------------NLPKPIESLMTRCWSKDPS 246 (307)
T ss_dssp HHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHCCCCchhhCccHHHHHHHHhcCCCCCccc---------------------------ccCHHHHHHHHHHhcCChh
Confidence 99999999997532 233333344333322211 3445699999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001152 1114 ERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~~ 1129 (1137)
+|||++|+++++....
T Consensus 247 ~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 247 QRPSMEEIVKIMTHLM 262 (307)
T ss_dssp GSCCHHHHHHHHHHHG
T ss_pred hCcCHHHHHHHHHHHH
Confidence 9999999999988653
No 169
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.1e-38 Score=375.04 Aligned_cols=257 Identities=21% Similarity=0.370 Sum_probs=210.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..+|++.+.||+|+||.||+|.+. +..||||+.+... . ..+. +.+|+.+|++++|||||++++++.. .
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~---~~~~----~~~E~~~l~~l~h~~iv~l~~~~~~-~- 255 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--M---SVEA----FLAEANVMKTLQHDKLVKLHAVVTK-E- 255 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--B---CHHH----HHHHHHHHTTCCCTTBCCEEEEECS-S-
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--c---cHHH----HHHHHHHHhhCCCCCEeeEEEEEeC-C-
Confidence 457999999999999999999996 4678998854321 1 1233 4889999999999999999999863 2
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++|+|.++++... ...+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 256 -------------~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~ 319 (454)
T 1qcf_A 256 -------------PIYIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 319 (454)
T ss_dssp -------------SCEEEECCCTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT
T ss_pred -------------ccEEEEeecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECC
Confidence 3599999999999999997532 235889999999999999999999999999999999999997
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+++........ ......+|+.|+|||++.. ..++.++|||||||++|||+
T Consensus 320 ~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~el~ 379 (454)
T 1qcf_A 320 S-------LVCKIADFGLARVIEDNEYT---------AREGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLMEIV 379 (454)
T ss_dssp T-------CCEEECSTTGGGGBCCHHHH---------TTCSSSSCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CcEEEeeCCCceEcCCCcee---------ccCCCcccccccCHHHhcc----CCCCcHHHHHhHHHHHHHHH
Confidence 7 78999999999765432111 0112346789999999975 46889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 T-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
| |..||.+....++...+..+.....+. .+++++.+|+.+||+.||++|||+
T Consensus 380 t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dp~~RPt~ 432 (454)
T 1qcf_A 380 TYGRIPYPGMSNPEVIRALERGYRMPRPE---------------------------NCPEELYNIMMRCWKNRPEERPTF 432 (454)
T ss_dssp TTSCCSSTTCCHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhHCcCH
Confidence 9 999999988888888776654332221 345569999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001152 1119 GDLYEMFVARTSS 1131 (1137)
Q Consensus 1119 ~EVL~~L~~~~~s 1131 (1137)
++|++.+......
T Consensus 433 ~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 433 EYIQSVLDDFYTA 445 (454)
T ss_dssp HHHHHHHHTSSSS
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887554
No 170
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.8e-38 Score=351.69 Aligned_cols=263 Identities=24% Similarity=0.381 Sum_probs=204.6
Q ss_pred CCCceEeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 872 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~-------~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg 872 (1137)
..+|++.+.||+|+||.||+|++ .+..||+|+.... ......+. +.+|+.+++++ +||||+++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~h~~i~~~~~ 94 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTEREA----LMSELKVLSYLGNHMNIVNLLG 94 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc---hhHHHHHH----HHHHHHHHhhcccCCCeeeEEE
Confidence 46799999999999999999986 2357888875322 12223333 48899999999 8999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-------------cCCCCCCHHHHHHHHHHHHHHHHH
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-------------TGEKHVSVKLALFIAQDVAAALVE 939 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~-------------~~~~~ls~~~i~~I~~QIa~gL~y 939 (1137)
++...+ ..++||||+++|+|.+++..... .....+++..++.++.||+.||+|
T Consensus 95 ~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 160 (313)
T 1t46_A 95 ACTIGG--------------PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 160 (313)
T ss_dssp EECSSS--------------SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred EEecCC--------------CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 998765 45999999999999999986321 112358999999999999999999
Q ss_pred HHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCC
Q 001152 940 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1019 (1137)
Q Consensus 940 LHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1019 (1137)
||++||+||||||+|||++.+ +.+||+|||++......... .......+|+.|+|||++.+
T Consensus 161 lH~~~i~H~dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~---- 221 (313)
T 1t46_A 161 LASKNCIHRDLAARNILLTHG-------RITKICDFGLARDIKNDSNY--------VVKGNARLPVKWMAPESIFN---- 221 (313)
T ss_dssp HHHTTCCCSCCSGGGEEEETT-------TEEEECCCGGGSCTTSCTTS--------EECSSSEECGGGCCHHHHHH----
T ss_pred HHHCCeecCCCccceEEEcCC-------CCEEEccccccccccccccc--------eeccCCCCcceeeChHHhcC----
Confidence 999999999999999999877 78999999998765443211 01123357789999999876
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001152 1020 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1097 (1137)
Q Consensus 1020 ~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~e-l~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1137)
..++.++|||||||++|+|++ |..||.+..... ....+..+..+..+ ...+
T Consensus 222 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 274 (313)
T 1t46_A 222 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP---------------------------EHAP 274 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCC---------------------------TTSC
T ss_pred CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCc---------------------------ccCC
Confidence 468899999999999999999 999998755433 33333333221111 0344
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1098 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1098 ~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
+.+.+++.+||+.||.+|||+.|+++++.....
T Consensus 275 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 275 AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 569999999999999999999999999987643
No 171
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-38 Score=358.68 Aligned_cols=264 Identities=25% Similarity=0.340 Sum_probs=203.1
Q ss_pred CCCCceEeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceee
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 871 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~-------~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkll 871 (1137)
...+|++.+.||+|+||.||+|++ .+..||+|+..... ..... .++.+|+.+++++ +||||++++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~----~~~~~E~~~l~~l~~hp~iv~~~ 115 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSER----EALMSELKMMTQLGSHENIVNLL 115 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------C----HHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHH----HHHHHHHHHHHhhcCCCCeeeEE
Confidence 346799999999999999999997 22468888754221 11222 2348899999999 899999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc------------------CCCCCCHHHHHHHHHHH
Q 001152 872 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------GEKHVSVKLALFIAQDV 933 (1137)
Q Consensus 872 g~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~------------------~~~~ls~~~i~~I~~QI 933 (1137)
+++...+ ..++||||+++|+|.+++...... ....+++..++.|+.||
T Consensus 116 ~~~~~~~--------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 181 (344)
T 1rjb_A 116 GACTLSG--------------PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQV 181 (344)
T ss_dssp EEECSSS--------------SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHH
T ss_pred EEEeeCC--------------ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHH
Confidence 9998765 459999999999999999763211 01348999999999999
Q ss_pred HHHHHHHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhh
Q 001152 934 AAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVL 1013 (1137)
Q Consensus 934 a~gL~yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 1013 (1137)
+.||+|||++||+||||||+|||++.+ +.+||+|||++.......... ......+|+.|+|||++
T Consensus 182 ~~aL~~LH~~~ivH~Dikp~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~t~~y~aPE~~ 246 (344)
T 1rjb_A 182 AKGMEFLEFKSCVHRDLAARNVLVTHG-------KVVKICDFGLARDIMSDSNYV--------VRGNARLPVKWMAPESL 246 (344)
T ss_dssp HHHHHHHHHTTEEETTCSGGGEEEETT-------TEEEECCCGGGSCGGGCTTSE--------EETTEEECGGGCCHHHH
T ss_pred HHHHHHHHhCCcccCCCChhhEEEcCC-------CcEEeCCCccCcccccCccce--------eccCccCccCccCHHHh
Confidence 999999999999999999999999977 789999999997654322110 11234578899999998
Q ss_pred ccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCch
Q 001152 1014 RAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE 1091 (1137)
Q Consensus 1014 ~~~~~~~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~e-l~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 1091 (1137)
.+ ..++.++|||||||++|+|+| |..||.+..... ....+..+..+..+.
T Consensus 247 ~~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 298 (344)
T 1rjb_A 247 FE----GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPF------------------------ 298 (344)
T ss_dssp HH----CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCT------------------------
T ss_pred cc----CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCC------------------------
Confidence 76 468899999999999999998 999998765433 333334333222111
Q ss_pred hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1092 AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1092 ~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
..++++.+|+.+||+.||.+|||+.||+++++....
T Consensus 299 ---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 299 ---YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 334569999999999999999999999999988754
No 172
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8.4e-38 Score=379.57 Aligned_cols=262 Identities=21% Similarity=0.291 Sum_probs=209.5
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
....+|++.+.||+|+||.||+|++. +..+|+|+...... ........+.+|+.++++++||||+++++++.+
T Consensus 182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~-----~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~ 256 (543)
T 3c4z_A 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-----KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET 256 (543)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHh-----hhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee
Confidence 45678999999999999999999984 57789988643211 111112345789999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
.. ..|+||||++||+|.+++..... ....+++..++.|+.||+.||+|||++||+||||||+|||
T Consensus 257 ~~--------------~l~lVmE~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NIL 321 (543)
T 3c4z_A 257 KT--------------DLCLVMTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL 321 (543)
T ss_dssp SS--------------EEEEEECCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred CC--------------EEEEEEEeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEE
Confidence 65 67999999999999999875321 2346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 322 l~~~-------g~vkL~DFGla~~~~~~~~----------~~~~~~GT~~Y~APE~l~~----~~~~~~~DiwSlGvily 380 (543)
T 3c4z_A 322 LDDD-------GNVRISDLGLAVELKAGQT----------KTKGYAGTPGFMAPELLLG----EEYDFSVDYFALGVTLY 380 (543)
T ss_dssp ECTT-------SCEEECCCTTCEECCTTCC----------CBCCCCSCTTTSCHHHHTT----CCBCTHHHHHHHHHHHH
T ss_pred EeCC-------CCEEEeecceeeeccCCCc----------ccccccCCccccChhhhcC----CCCChHHhcCcchHHHH
Confidence 9987 7899999999976543211 1123479999999999975 56889999999999999
Q ss_pred HHHhCCCCCCCC----CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1037 ELLTLQVPYMGL----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1037 ELLTG~~Pf~~~----~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
||++|..||.+. ...++...+...... ++. ..++++.+|+.+||+.||
T Consensus 381 elltG~~PF~~~~~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~li~~lL~~dP 432 (543)
T 3c4z_A 381 EMIAARGPFRARGEKVENKELKQRVLEQAVT-YPD---------------------------KFSPASKDFCEALLQKDP 432 (543)
T ss_dssp HHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHSCSSG
T ss_pred HHHhCCCCCCCCccchhHHHHHHHHhhcccC-CCc---------------------------ccCHHHHHHHHHhccCCH
Confidence 999999999764 334455555433211 110 344569999999999999
Q ss_pred CCCCC-----HHHHHHHHHhhc
Q 001152 1113 TERPT-----AGDLYEMFVART 1129 (1137)
Q Consensus 1113 ~~RPS-----a~EVL~~L~~~~ 1129 (1137)
.+||+ +++|++|+|+..
T Consensus 433 ~~R~~~~~~~a~ei~~Hpff~~ 454 (543)
T 3c4z_A 433 EKRLGFRDGSCDGLRTHPLFRD 454 (543)
T ss_dssp GGSCCCBTTBSHHHHTSGGGTT
T ss_pred hHCCCCcccCHHHHHcCccccC
Confidence 99995 589999999975
No 173
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.2e-37 Score=354.14 Aligned_cols=297 Identities=19% Similarity=0.213 Sum_probs=208.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.+.||+|+||.||+|++. +..||+|+.. .. ....... ++.+|+.++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~-~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 82 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PF-DKPLFAL----RTLREIKILKHFKHENIITIFNIQRPDS 82 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC--CC-SSHHHHH----HHHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeec--cc-ccchHHH----HHHHHHHHHHhCcCCCcCCeeeeecccc
Confidence 468999999999999999999986 5678888753 21 1222222 3478999999999999999999876542
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
+. .....++||||+. ++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 83 ~~---------~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~ 146 (353)
T 2b9h_A 83 FE---------NFNEVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146 (353)
T ss_dssp ST---------TCCCEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred cC---------ccceEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc
Confidence 11 1226799999997 799999875 3699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++........................||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 147 ~~-------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l 216 (353)
T 2b9h_A 147 SN-------CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT---SAKYSRAMDVWSCGCILAEL 216 (353)
T ss_dssp TT-------CCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHS---CCCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEEecccccccccccccccCccccccchhhccccccccCCeeecc---CCCccchhhHHHHHHHHHHH
Confidence 77 789999999998655322111000000011123468999999998764 25688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHc-CCCCCchhHHhhhcccc-cccccccC--CCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1039 LTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCH-EHEVAQSG--SGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~-g~~p~l~~~l~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
++|..||.+.+..+....+.. ...+............. ........ ............++++.+|+.+||+.||.+
T Consensus 217 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 296 (353)
T 2b9h_A 217 FLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296 (353)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGG
T ss_pred HhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCccc
Confidence 999999998877665554422 11111110000000000 00000000 000001111256678999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001152 1115 RPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~ 1130 (1137)
|||++|+++|+|+...
T Consensus 297 Rpt~~ell~hp~~~~~ 312 (353)
T 2b9h_A 297 RITAKEALEHPYLQTY 312 (353)
T ss_dssp SCCHHHHHTSGGGTTT
T ss_pred CCCHHHHhcCcccccc
Confidence 9999999999999864
No 174
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.9e-37 Score=350.81 Aligned_cols=285 Identities=20% Similarity=0.222 Sum_probs=207.1
Q ss_pred CCCceEeeeecccCceEEEEEEE---CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCC------Ccceee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF---GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS------CIVEMY 871 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~---~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~Hp------NIVkll 871 (1137)
..+|++.+.||+|+||+||+|.+ .+..||+|+.... ....+ .+.+|+.+++.++|+ +|++++
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~----~~~~e~~~l~~l~~~~~~~~~~i~~~~ 83 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCE----AARSEIQVLEHLNTTDPNSTFRCVQML 83 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHH----HHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhH----HHHHHHHHHHHhhhcCCCCceeeEeee
Confidence 36899999999999999999987 3567899885321 22222 347899999888765 499999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 001152 872 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 951 (1137)
Q Consensus 872 g~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLK 951 (1137)
+++...+ +.++||||+ +++|.+++.. .+...+++..+..|+.||+.||+|||++||+|||||
T Consensus 84 ~~~~~~~--------------~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk 145 (339)
T 1z57_A 84 EWFEHHG--------------HICIVFELL-GLSTYDFIKE---NGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLK 145 (339)
T ss_dssp EEEEETT--------------EEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred cccccCC--------------cEEEEEcCC-CCCHHHHHHh---cCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence 9998765 679999999 7999999976 233468999999999999999999999999999999
Q ss_pred CCCeEecccccc------------CCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCC
Q 001152 952 SENILIDLERKK------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1019 (1137)
Q Consensus 952 P~NILld~~~~~------------~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1019 (1137)
|+|||++.+... ....+.+||+|||++...... .....||+.|+|||++.+
T Consensus 146 p~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~---- 208 (339)
T 1z57_A 146 PENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-------------HSTLVSTRHYRAPEVILA---- 208 (339)
T ss_dssp GGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-------------CCSSCSCGGGCCHHHHTT----
T ss_pred HHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc-------------cccccCCccccChHHhhC----
Confidence 999999864100 000267999999998753321 113468999999999875
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhccccc---cc------------ccccC
Q 001152 1020 NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE---HE------------VAQSG 1084 (1137)
Q Consensus 1020 ~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~---~~------------~~~~~ 1084 (1137)
..++.++|||||||++|||++|..||...+..+....+.....+.....+........ .. .....
T Consensus 209 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T 1z57_A 209 LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC 288 (339)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC
T ss_pred CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcC
Confidence 4688999999999999999999999998877766555533222211111111000000 00 00000
Q ss_pred CCC-CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1085 SGF-EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1085 ~~~-~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
... .........++++.+|+.+||+.||.+|||++|+++|+|+..
T Consensus 289 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 289 KPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334 (339)
T ss_dssp CCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred cchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence 000 000011245678999999999999999999999999999975
No 175
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.2e-37 Score=348.06 Aligned_cols=264 Identities=22% Similarity=0.331 Sum_probs=202.0
Q ss_pred CCCceEeeeecccCceEEEEEEECC---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~---~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
..+|++.+.||+|+||+||+|++.. ..++++++..... ......+. +.+|+.++++++||||+++++++...
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~ 98 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQ----FLTEGIIMKDFSHPNVLSLLGICLRS 98 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHH----HHHHHHHHHTCCCTTBCCCCEEECCS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHH----HHHHHHHHHhCCCCCEeeeeeEEEcC
Confidence 4568999999999999999999742 3333343333332 22333333 48899999999999999999986543
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+. ..++||||+++++|.++++. ....+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 99 ~~-------------~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~ 161 (298)
T 3f66_A 99 EG-------------SPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 161 (298)
T ss_dssp SS-------------CCEEEEECCTTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CC-------------ceEEEEeCCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE
Confidence 31 45999999999999999965 23468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||++.......... ........+|+.|+|||.+.+ ..++.++||||||+++|+
T Consensus 162 ~~~-------~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 224 (298)
T 3f66_A 162 DEK-------FTVKVADFGLARDMYDKEYYS------VHNKTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVLLWE 224 (298)
T ss_dssp CTT-------CCEEECSCGGGCCCSCGGGCB------C-----CCBCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred CCC-------CCEEECcccccccccccchhc------cccccCCCCCccccChHHhcC----CCCChHHHHHHHHHHHHH
Confidence 877 789999999997654322111 011123457889999999976 568899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1038 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1038 LLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
|++ +.+||......+....+..+..+..+. ..++.+.+++.+||+.||.+||
T Consensus 225 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rp 277 (298)
T 3f66_A 225 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPE---------------------------YCPDPLYEVMLKCWHPKAEMRP 277 (298)
T ss_dssp HHTTSCCSSTTSCTTTHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHhCCCCCCccCCHHHHHHHHhcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCChhhCc
Confidence 999 677777766666666665544332221 2345699999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001152 1117 TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ 1130 (1137)
|+.|+++.+.....
T Consensus 278 s~~ell~~L~~~~~ 291 (298)
T 3f66_A 278 SFSELVSRISAIFS 291 (298)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999887643
No 176
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.7e-37 Score=348.96 Aligned_cols=267 Identities=25% Similarity=0.417 Sum_probs=200.6
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 797 DPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 797 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
....+.+|++.+.||+|+||.||+|.+. +..+|+|+...... ......+. +.+|+.++++++||||+++++++
T Consensus 27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~ 101 (310)
T 2wqm_A 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARAD----CIKEIDLLKQLNHPNVIKYYASF 101 (310)
T ss_dssp TTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHH----HHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHH----HHHHHHHHHhCCCCCEeeEEEEE
Confidence 3456788999999999999999999974 57788887643221 22333333 48899999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
...+ ..++||||+++++|.+++...... ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 102 ~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~N 166 (310)
T 2wqm_A 102 IEDN--------------ELNIVLELADAGDLSRMIKHFKKQ-KRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN 166 (310)
T ss_dssp EETT--------------EEEEEEECCCSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred EcCC--------------cEEEEEecCCCCCHHHHHHHhccc-ccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHH
Confidence 8765 679999999999999999764332 3569999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
|+++.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||++
T Consensus 167 Il~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~i 225 (310)
T 2wqm_A 167 VFITAT-------GVVKLGDLGLGRFFSSKTT----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCL 225 (310)
T ss_dssp EEECTT-------SCEEECCC----------------------------CCSSCCHHHHTT----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEEeccceeeecCCCc----------cccccCCCeeEeChHHhCC----CCCCchhhHHHHHHH
Confidence 999877 7899999999875543211 1113468999999999875 568899999999999
Q ss_pred HHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1035 LLELLTLQVPYMGL--SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~--~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
+|+|++|..||.+. ....+...+.....+.... ...++++.+++.+||+.||
T Consensus 226 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dp 279 (310)
T 2wqm_A 226 LYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS--------------------------DHYSEELRQLVNMCINPDP 279 (310)
T ss_dssp HHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCT--------------------------TTSCHHHHHHHHHHTCSSG
T ss_pred HHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcc--------------------------cccCHHHHHHHHHHcCCCh
Confidence 99999999999753 3344445554433322110 1345569999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001152 1113 TERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~ 1130 (1137)
.+|||+.+|++++.....
T Consensus 280 ~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 280 EKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp GGSCCHHHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHHHH
Confidence 999999999999887644
No 177
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.1e-37 Score=355.26 Aligned_cols=261 Identities=22% Similarity=0.367 Sum_probs=208.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCccee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 870 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~---------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkl 870 (1137)
..+|++.+.||+|+||.||+|++. +..||+|+.... ......+. +.+|+.+++++ +||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~hp~iv~~ 106 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD----LVSEMEMMKMIGKHKNIINL 106 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCE
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC---CcHHHHHH----HHHHHHHHHHhhcCCCEeeE
Confidence 467999999999999999999974 245888874322 12333333 48899999999 89999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001152 871 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 939 (1137)
Q Consensus 871 lg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-----------~~~~ls~~~i~~I~~QIa~gL~y 939 (1137)
++++.+.+ ..++||||+++++|.+++...... ....+++..++.|+.||+.||+|
T Consensus 107 ~~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 172 (334)
T 2pvf_A 107 LGACTQDG--------------PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172 (334)
T ss_dssp EEEECSSS--------------CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEccCC--------------ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 99998765 459999999999999999863211 12358999999999999999999
Q ss_pred HHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCC
Q 001152 940 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1019 (1137)
Q Consensus 940 LHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1019 (1137)
||++||+||||||+|||++.+ +.+||+|||++.......... ......+|+.|+|||++.+
T Consensus 173 LH~~~ivH~Dlkp~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~---- 233 (334)
T 2pvf_A 173 LASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDINNIDYYK--------KTTNGRLPVKWMAPEALFD---- 233 (334)
T ss_dssp HHHTTEECSCCSGGGEEECTT-------CCEEECCCTTCEECTTTSSEE--------CCSCCCCCGGGCCHHHHHH----
T ss_pred HHhCCeeCCCCccceEEEcCC-------CCEEEcccccccccccccccc--------ccCCCCcccceeChHHhcC----
Confidence 999999999999999999877 789999999997654322110 1112357889999999876
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001152 1020 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1098 (1137)
Q Consensus 1020 ~~~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1137)
..++.++|||||||++|+|++ |..||.+....++...+..+..+..+. .+++
T Consensus 234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 286 (334)
T 2pvf_A 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------------------------NCTN 286 (334)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCT---------------------------TCCH
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCc---------------------------cCCH
Confidence 457899999999999999999 999999888888777776654332221 3345
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001152 1099 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1099 ~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
++.+++.+||+.||.+|||+.|+++++...
T Consensus 287 ~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 287 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 699999999999999999999999998865
No 178
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.3e-37 Score=357.01 Aligned_cols=293 Identities=19% Similarity=0.180 Sum_probs=200.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
..+.+|++.+.||+|+||+||+|++. +..||+|+........ . +..+|+..++.++||||+++++++..
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~----~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-----N----RELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC-----C----HHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc-----H----HHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 34688999999999999999999985 5678888753322111 1 12567788889999999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--hCCeeeccCCCCC
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--SKHIMHRDIKSEN 954 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLH--s~gIIHrDLKP~N 954 (1137)
.... .......++||||++ ++|...+..... ....+++..+..++.||+.||.||| ++||+||||||+|
T Consensus 91 ~~~~-------~~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~N 161 (360)
T 3e3p_A 91 LGER-------DRRDIYLNVVMEYVP-DTLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHN 161 (360)
T ss_dssp ECSS-------CTTCEEEEEEEECCS-CBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGG
T ss_pred cccc-------cccceeEEEEeeccc-ccHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHH
Confidence 4310 011225789999998 577666654332 2357899999999999999999999 9999999999999
Q ss_pred eEecc-ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001152 955 ILIDL-ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1033 (1137)
Q Consensus 955 ILld~-~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1033 (1137)
||++. + +.+||+|||++........ .....||+.|+|||++.+ ...++.++|||||||
T Consensus 162 Ill~~~~-------~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG~ 220 (360)
T 3e3p_A 162 VLVNEAD-------GTLKLCDFGSAKKLSPSEP-----------NVAYICSRYYRAPELIFG---NQHYTTAVDIWSVGC 220 (360)
T ss_dssp EEEETTT-------TEEEECCCTTCBCCCTTSC-----------CCSTTSCGGGCCHHHHTT---CSSCCTHHHHHHHHH
T ss_pred EEEeCCC-------CcEEEeeCCCceecCCCCC-----------cccccCCcceeCHHHHcC---CCCCCcHHHHHHHHH
Confidence 99986 4 7899999999976543221 123468999999999864 245789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCC----chhhhhhHHHHHHHHHHhcc
Q 001152 1034 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK----PEAELETLSFLVDVFRRCTE 1109 (1137)
Q Consensus 1034 iL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~L~dLl~~CL~ 1109 (1137)
++|+|++|..||.+.+..+....+...........+.................... +......++++.+|+.+||+
T Consensus 221 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 300 (360)
T 3e3p_A 221 IFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ 300 (360)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhc
Confidence 99999999999999888777666643222221111111100000000000000000 01111357789999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001152 1110 ENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1110 ~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
.||.+|||+.|+++|+|+...
T Consensus 301 ~dP~~Rpt~~e~l~hp~f~~~ 321 (360)
T 3e3p_A 301 YLPEERMKPYEALCHPYFDEL 321 (360)
T ss_dssp SSGGGSCCHHHHTTSGGGGGG
T ss_pred cCccccCCHHHHhcCcccccc
Confidence 999999999999999999854
No 179
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7.7e-38 Score=355.13 Aligned_cols=270 Identities=21% Similarity=0.347 Sum_probs=210.0
Q ss_pred CCCCCCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcc
Q 001152 796 LDPGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIV 868 (1137)
Q Consensus 796 ~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIV 868 (1137)
+......+|++.+.||+|+||.||+|++. +..||+|+.. .. ........ +.+|+.++++++||||+
T Consensus 24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~E~~~l~~l~h~~iv 96 (327)
T 2yfx_A 24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP--EV-CSEQDELD----FLMEALIISKFNHQNIV 96 (327)
T ss_dssp SCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECC--SS-CCHHHHHH----HHHHHHHHHHCCCTTBC
T ss_pred cccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEec--cc-cchhhHHH----HHHHHHHHhhCCCCCCC
Confidence 44455678999999999999999999853 3468888743 21 12333333 48899999999999999
Q ss_pred eeeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Q 001152 869 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIM 946 (1137)
Q Consensus 869 kllg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~--~~~~ls~~~i~~I~~QIa~gL~yLHs~gII 946 (1137)
++++++.... ..++||||+++++|.+++...... ....+++..++.++.||+.||.|||++||+
T Consensus 97 ~~~~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~ 162 (327)
T 2yfx_A 97 RCIGVSLQSL--------------PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI 162 (327)
T ss_dssp CEEEEECSSS--------------SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eEEEEEcCCC--------------CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCee
Confidence 9999998765 459999999999999999873221 114589999999999999999999999999
Q ss_pred eccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchh
Q 001152 947 HRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1026 (1137)
Q Consensus 947 HrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1026 (1137)
||||||+|||++.++ ....+||+|||++......... .......+|+.|+|||++.+ ..++.++
T Consensus 163 H~dlkp~NIli~~~~----~~~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~ 226 (327)
T 2yfx_A 163 HRDIAARNCLLTCPG----PGRVAKIGDFGMARDIYRASYY--------RKGGCAMLPVKWMPPEAFME----GIFTSKT 226 (327)
T ss_dssp CSCCCGGGEEESCSS----TTCCEEECCCHHHHHHHC--------------CCGGGSCGGGCCHHHHHH----CCCCHHH
T ss_pred cCcCCHhHEEEecCC----CcceEEECcccccccccccccc--------ccCCCcCCCcceeCHhHhcC----CCCCchh
Confidence 999999999998541 1256999999998754332211 11123468899999999876 4688999
Q ss_pred hHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHH
Q 001152 1027 DIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFR 1105 (1137)
Q Consensus 1027 DVWSLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~ 1105 (1137)
|||||||++|+|++ |..||......++...+..+..+..+. .+++.+.+++.
T Consensus 227 Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~ 279 (327)
T 2yfx_A 227 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK---------------------------NCPGPVYRIMT 279 (327)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHH
Confidence 99999999999998 999999888887777776655433221 33456999999
Q ss_pred HhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1106 RCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1106 ~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
+||+.||.+||++.+|++++|...
T Consensus 280 ~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 280 QCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhcCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999999864
No 180
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=362.95 Aligned_cols=255 Identities=22% Similarity=0.230 Sum_probs=199.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||+||+|.+. +..||+|+..................++.+|+.++++++||||+++++++.+.+
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~- 102 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG- 102 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC-
Confidence 57999999999999999999874 567888886544322110000001112367999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCC-CHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGG-SVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~gg-SL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+.+| +|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 103 -------------~~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~ 164 (335)
T 3dls_A 103 -------------FFQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA 164 (335)
T ss_dssp -------------EEEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred -------------EEEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc
Confidence 679999999766 99999875 34699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++........ .....||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 165 ~~-------~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~el 223 (335)
T 3dls_A 165 ED-------FTIKLIDFGSAAYLERGKL-----------FYTFCGTIEYCAPEVLMG---NPYRGPELEMWSLGVTLYTL 223 (335)
T ss_dssp TT-------SCEEECCCTTCEECCTTCC-----------BCEECSCGGGCCHHHHTT---CCBCSHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeecccceECCCCCc-----------eeccCCCccccChhhhcC---CCCCCCcccchhHHHHHHHH
Confidence 87 7899999999976543221 123469999999999875 23348899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||..... .+.... . . ....++++.+|+.+||+.||.+|||+
T Consensus 224 ~~g~~pf~~~~~-----~~~~~~--~------------------------~---~~~~~~~l~~li~~~L~~dP~~Rps~ 269 (335)
T 3dls_A 224 VFEENPFCELEE-----TVEAAI--H------------------------P---PYLVSKELMSLVSGLLQPVPERRTTL 269 (335)
T ss_dssp HHSSCSCSSGGG-----GTTTCC--C------------------------C---SSCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HhCCCchhhHHH-----HHhhcc--C------------------------C---CcccCHHHHHHHHHHccCChhhCcCH
Confidence 999999965211 000000 0 0 00244569999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
+|+++|+|+...
T Consensus 270 ~ell~hp~~~~~ 281 (335)
T 3dls_A 270 EKLVTDPWVTQP 281 (335)
T ss_dssp HHHHHCTTTTCC
T ss_pred HHHhcCccccCC
Confidence 999999998653
No 181
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-37 Score=350.07 Aligned_cols=267 Identities=24% Similarity=0.357 Sum_probs=195.4
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC--CCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L--~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|++.+..||||++.... ... ..+|.+++... +||||+++++++.....
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-------~~~----~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE-------EAS----WFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG-------HHH----HHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc-------cch----hhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 579999999999999999999999999999864221 111 14455555554 89999999999876531
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeccCC
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRDIK 951 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~--------gIIHrDLK 951 (1137)
.....++||||+++|+|.++++. ..+++..++.|+.||+.||+|||++ ||+|||||
T Consensus 106 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dik 169 (337)
T 3mdy_A 106 ----------SWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169 (337)
T ss_dssp ----------GGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCC
T ss_pred ----------CCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccc
Confidence 11267999999999999999976 3599999999999999999999998 99999999
Q ss_pred CCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCC--CCchhhHH
Q 001152 952 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL--YGLEVDIW 1029 (1137)
Q Consensus 952 P~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~--~s~ksDVW 1029 (1137)
|+|||++.+ +.+||+|||++.......... ........||+.|+|||++.+...... ++.++|||
T Consensus 170 p~Nill~~~-------~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 236 (337)
T 3mdy_A 170 SKNILVKKN-------GTCCIADLGLAVKFISDTNEV------DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMY 236 (337)
T ss_dssp GGGEEECTT-------SCEEECCCTTCEECC---------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHH
T ss_pred hHHEEECCC-------CCEEEEeCCCceeeccccccc------cCCCCCCccCcceeChhhcccccCCccccCccccchH
Confidence 999999877 789999999997654322110 011124469999999999975221110 01259999
Q ss_pred HHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHH-cCCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001152 1030 SYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1093 (1137)
Q Consensus 1030 SLGviL~ELLTG----------~~Pf~~~~-----~~el~~~I~-~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1137)
||||++|||++| +.||.... .......+. ....+.++..+ ..
T Consensus 237 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 294 (337)
T 3mdy_A 237 SFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRW----------------------SS 294 (337)
T ss_dssp HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG----------------------GG
T ss_pred HHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccc----------------------hh
Confidence 999999999999 66665321 111222221 11111111111 11
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1094 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1094 ~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
..+++++.+|+.+||+.||.+|||+.||++++.....
T Consensus 295 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 295 DECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp SHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 2677889999999999999999999999999987654
No 182
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.5e-37 Score=343.41 Aligned_cols=267 Identities=16% Similarity=0.170 Sum_probs=204.0
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEecC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 877 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~~ 877 (1137)
-.+|++.+.||+|+||.||+|.+ .+..||+|+...... .+ .+.+|+.+++.+ +|+||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~----~~~~e~~~~~~l~~~~~i~~~~~~~~~~ 78 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------AP----QLRDEYRTYKLLAGCTGIPNVYYFGQEG 78 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SC----CHHHHHHHHHHTTTCTTCCCEEEEEEET
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------cH----HHHHHHHHHHHHhcCCCCCeEEeecCCC
Confidence 35799999999999999999996 467889997542211 11 236799999999 699999999998766
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
. ..++||||+ +++|.+++... ...+++..+..|+.||+.||+|||++||+||||||+|||+
T Consensus 79 ~--------------~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~ 139 (298)
T 1csn_A 79 L--------------HNVLVIDLL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 139 (298)
T ss_dssp T--------------EEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE
T ss_pred c--------------eeEEEEEec-CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe
Confidence 5 679999999 89999999762 2459999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+. ......+||+|||++........... ..........||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 140 ~~~~--~~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~e 210 (298)
T 1csn_A 140 GRPN--SKNANMIYVVDFGMVKFYRDPVTKQH---IPYREKKNLSGTARYMSINTHLG----REQSRRDDLEALGHVFMY 210 (298)
T ss_dssp CCSS--STTTTCEEECCCTTCEESBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred ccCC--CCCCCeEEEEECcccccccccccccc---ccccCccCCCCCcccCCchhhcC----CCCChHHHHHHHHHHHHH
Confidence 8762 12224599999999986654322110 01112234579999999999875 568899999999999999
Q ss_pred HHhCCCCCCCC---CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1038 LLTLQVPYMGL---SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1038 LLTG~~Pf~~~---~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|++|+.||.+. ...+....+.....+..... ....+++++.+++.+||+.||.+
T Consensus 211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~ 267 (298)
T 1csn_A 211 FLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE-----------------------LCAGFPEEFYKYMHYARNLAFDA 267 (298)
T ss_dssp HHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH-----------------------HTTTSCHHHHHHHHHHHHCCTTC
T ss_pred HHcCCCCcchhhccccHHHHHHHHhhccCccHHH-----------------------HHhhCcHHHHHHHHHHhcCCccc
Confidence 99999999873 33334433322111000000 01144567999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001152 1115 RPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~ 1128 (1137)
||++++|++.+...
T Consensus 268 RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 268 TPDYDYLQGLFSKV 281 (298)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999988765
No 183
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.1e-38 Score=358.89 Aligned_cols=278 Identities=22% Similarity=0.278 Sum_probs=205.2
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
...+|++.+.||+|+||+||+|++. +..||+|+.... . ....+. +.+|+.+++.++||||+++++++.+.+
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~--~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--S--SQGIEE----FETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC--C--SSHHHH----HHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc--C--hHHHHH----HHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3568999999999999999999985 577888864322 1 222333 378999999999999999999987655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++++|.+++... ......+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 109 --------------~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~ 173 (321)
T 2qkw_B 109 --------------EMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD 173 (321)
T ss_dssp --------------CCEEEEECCTTCBTGGGSSSS-CCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC
T ss_pred --------------eEEEEEEcCCCCcHHHHHhcc-CCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC
Confidence 459999999999999988642 12224699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 174 ~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el 234 (321)
T 2qkw_B 174 EN-------FVPKITDFGISKKGTELDQT--------HLSTVVKGTLGYIDPEYFIK----GRLTEKSDVYSFGVVLFEV 234 (321)
T ss_dssp TT-------CCEEECCCTTCEECSSSSCC--------CCBCCCEEETTTCCHHHHHH----CBCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeccccccccccccc--------ccccccCCCccccCHHHhcC----CCCCcccchHhHHHHHHHH
Confidence 77 78999999998754332111 11123458999999999876 4678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|+.||.+..+.+....+.. ........ ...+..............+..+.+++.+||+.||++|||+
T Consensus 235 l~g~~p~~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~ 303 (321)
T 2qkw_B 235 LCARSAIVQSLPREMVNLAEW--------AVESHNNG---QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303 (321)
T ss_dssp HHCCTTCSCSSSSSCCCHHHH--------THHHHTTT---CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCH
T ss_pred HhCCCcccccCcHHHHHHHHH--------hhhccccc---cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCH
Confidence 999999976432211100000 00000000 0000000000111223677889999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
.||+++++....
T Consensus 304 ~ell~~L~~~l~ 315 (321)
T 2qkw_B 304 GDVLWKLEYALR 315 (321)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999987643
No 184
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=9.6e-38 Score=346.66 Aligned_cols=256 Identities=22% Similarity=0.393 Sum_probs=207.8
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+|++.+.||+|+||.||+|.+. +..+|+|+.... ....+. +.+|+.++++++||||+++++++.+.
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~ 81 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEE----FLKEAAVMKEIKHPNLVQLLGVCTRE 81 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-----STHHHH----HHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-----HHHHHH----HHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 3567999999999999999999996 456777765321 122333 37899999999999999999998766
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
. ..++||||+++++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+||++
T Consensus 82 ~--------------~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~ 144 (288)
T 3kfa_A 82 P--------------PFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 144 (288)
T ss_dssp S--------------SEEEEEECCTTEEHHHHHHH---CCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE
T ss_pred C--------------CEEEEEEcCCCCcHHHHHHh---cccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE
Confidence 5 56999999999999999976 334569999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||++.......... .....+|+.|+|||++.+ ..++.++||||||+++|+
T Consensus 145 ~~~-------~~~~l~Dfg~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 204 (288)
T 3kfa_A 145 GEN-------HLVKVADFGLSRLMTGDTYTA---------HAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLWE 204 (288)
T ss_dssp CGG-------GCEEECCCCGGGTSCSSSSEE---------ETTEEECGGGCCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEccCccceeccCCcccc---------ccCCccccCcCChhhhcc----CCCCchhhHHHHHHHHHH
Confidence 887 789999999987654322111 112356789999999976 468899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1038 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1038 LLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
|++ |..||.+....++...+.....+..+. .+++.+.+++.+||+.||.+||
T Consensus 205 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~~Rp 257 (288)
T 3kfa_A 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPE---------------------------GCPEKVYELMRACWQWNPSDRP 257 (288)
T ss_dssp HHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHhCCCCCCCCCCHHHHHHHHhccCCCCCCC---------------------------CCCHHHHHHHHHHhCCChhhCc
Confidence 999 999998877776666665543322211 3445699999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001152 1117 TAGDLYEMFVAR 1128 (1137)
Q Consensus 1117 Sa~EVL~~L~~~ 1128 (1137)
|++|+++.+...
T Consensus 258 s~~~~~~~l~~~ 269 (288)
T 3kfa_A 258 SFAEIHQAFETM 269 (288)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999987653
No 185
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.3e-38 Score=355.43 Aligned_cols=277 Identities=23% Similarity=0.356 Sum_probs=194.5
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+|++.+.||+|+||.||+|.+ .+..||+|+...... ....+ .+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~ 85 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMD----ELLKEIQAMSQCHHPNIVSYYTSFVVK 85 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------------CCCCCCCTTBCCEEEEEESS
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHH----HHHHHHHHHhhcCCCCEeeEEEEEeec
Confidence 457899999999999999999987 456788886432211 11122 347899999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~---~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
+ ..++||||+++++|.+++...... ....+++..+..++.||+.||+|||++||+||||||+|
T Consensus 86 ~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~N 151 (303)
T 2vwi_A 86 D--------------ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151 (303)
T ss_dssp S--------------CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred C--------------CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 5 569999999999999999754322 23469999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
|+++.+ +.+||+|||++.......... .........||+.|+|||++.+. ..++.++|||||||+
T Consensus 152 il~~~~-------~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~i 216 (303)
T 2vwi_A 152 ILLGED-------GSVQIADFGVSAFLATGGDIT-----RNKVRKTFVGTPCWMAPEVMEQV---RGYDFKADIWSFGIT 216 (303)
T ss_dssp EEECTT-------CCEEECCCHHHHHCC--------------------CCCTTCCHHHHHHH---HCCCTHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEEeccchheeccCCCcc-----chhhhcccCCCccccCHHHhccc---cCCCchhhHHHHHHH
Confidence 999877 789999999987554321110 00111234699999999998642 247899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|+|++|..||.................+......... ......++++.+++.+||+.||.+
T Consensus 217 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~dp~~ 278 (303)
T 2vwi_A 217 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDK------------------EMLKKYGKSFRKMISLCLQKDPEK 278 (303)
T ss_dssp HHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----------------------CCCCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHhCCCCCccCchhhHHHHHhccCCCccccccccc------------------hhhhhhhHHHHHHHHHHccCChhh
Confidence 99999999999887665555444443333222111100 000134566999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001152 1115 RPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~ 1130 (1137)
|||+.|+++|+|+...
T Consensus 279 Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 279 RPTAAELLRHKFFQKA 294 (303)
T ss_dssp SCCHHHHHTSTTC---
T ss_pred CcCHHHHhhChhhhcC
Confidence 9999999999999754
No 186
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.2e-38 Score=348.42 Aligned_cols=253 Identities=24% Similarity=0.370 Sum_probs=200.8
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
...+|++.+.||+|+||.||+|++.+..+|+|+..... ..+. +.+|+.++++++||||+++++++.+..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~------~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~- 87 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA------TAQA----FLAEASVMTQLRHSNLVQLLGVIVEEK- 87 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--------HH----HHHTHHHHTTCCCTTBCCEEEEECCC--
T ss_pred ChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh------HHHH----HHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 46789999999999999999999999999999853221 1222 478999999999999999999876432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
...++||||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 88 ------------~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~ 152 (278)
T 1byg_A 88 ------------GGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 152 (278)
T ss_dssp -------------CCEEEECCCTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred ------------CceEEEEecCCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeC
Confidence 14599999999999999997632 224889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++....... ....+++.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 153 ~-------~~~~l~Dfg~~~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 208 (278)
T 1byg_A 153 D-------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEIY 208 (278)
T ss_dssp T-------SCEEECCCCC-------------------------CCTTTSCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CcEEEeeccccccccccc-------------cCCCccccccCHHHhCC----CCCCchhcHHHHHHHHHHHH
Confidence 7 789999999887543321 12357889999999875 56889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 T-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+ |..||......++...+..+..+..+. .+++.+.+++.+||+.||.+|||+
T Consensus 209 t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps~ 261 (278)
T 1byg_A 209 SFGRVPYPRIPLKDVVPRVEKGYKMDAPD---------------------------GCPPAVYEVMKNCWHLDAAMRPSF 261 (278)
T ss_dssp TTSCCSCTTSCGGGHHHHHTTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHhcCCCCCCcc---------------------------cCCHHHHHHHHHHhcCChhhCCCH
Confidence 8 999998877666666554443222111 345569999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001152 1119 GDLYEMFVART 1129 (1137)
Q Consensus 1119 ~EVL~~L~~~~ 1129 (1137)
.|+++.+....
T Consensus 262 ~~l~~~L~~i~ 272 (278)
T 1byg_A 262 LQLREQLEHIK 272 (278)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 187
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.9e-38 Score=347.40 Aligned_cols=262 Identities=27% Similarity=0.326 Sum_probs=211.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|++. +..+|+|+....... ....+. +.+|+.++++++||||+++++++.+..
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTST----ILREVELLKKLDHPNIMKLFEILEDSS- 94 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHH----HHHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHH----HHHHHHHHHhccCCCccEEEEEEeCCC-
Confidence 57999999999999999999984 578999986543322 112223 478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+||+++.
T Consensus 95 -------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~ 156 (287)
T 2wei_A 95 -------------SFYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156 (287)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESC
T ss_pred -------------eEEEEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEec
Confidence 679999999999999988752 36899999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+. ..+.+||+|||++........ .....||+.|+|||++.+ .++.++||||||+++|+|+
T Consensus 157 ~~----~~~~~kL~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~-----~~~~~~Di~slG~~l~~l~ 216 (287)
T 2wei_A 157 KE----KDCDIKIIDFGLSTCFQQNTK-----------MKDRIGTAYYIAPEVLRG-----TYDEKCDVWSAGVILYILL 216 (287)
T ss_dssp SS----TTCCEEECSTTGGGTBCCCSS-----------CSCHHHHHTTCCHHHHTT-----CCCTHHHHHHHHHHHHHHH
T ss_pred CC----CcccEEEeccCcceeecCCCc-----------cccccCcccccChHHhcC-----CCCCchhhHhHHHHHHHHH
Confidence 52 125799999999875443211 113358889999999864 4789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
+|..||.+....++...+..+......... ...++++.+++.+||+.||.+|||+.
T Consensus 217 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~li~~~l~~dp~~Rps~~ 272 (287)
T 2wei_A 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQW------------------------RTISDDAKDLIRKMLTFHPSLRITAT 272 (287)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCSGGG------------------------TTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCCchhh------------------------hhcCHHHHHHHHHHcccChhhCcCHH
Confidence 999999998888877777665432111000 13455699999999999999999999
Q ss_pred HHHHHHHhhcCCC
Q 001152 1120 DLYEMFVARTSSS 1132 (1137)
Q Consensus 1120 EVL~~L~~~~~ss 1132 (1137)
|+++|+|+....+
T Consensus 273 ell~hp~~~~~~~ 285 (287)
T 2wei_A 273 QCLEHPWIQKYSS 285 (287)
T ss_dssp HHHHSHHHHHHCC
T ss_pred HHhcCHHHhcccc
Confidence 9999999986543
No 188
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.5e-37 Score=344.92 Aligned_cols=257 Identities=21% Similarity=0.321 Sum_probs=204.2
Q ss_pred CCCceEee-eecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 801 FPSLSSCD-EAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 801 ~~~y~l~~-~LG~GsfG~Vy~a~~~----~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
..+|++.+ .||+|+||+||+|.+. +..+|+|+.... .......+ ++.+|+.+++.++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE--ANDPALKD----ELLAEANVMQQLDNPYIVRMIGICE 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHH----HHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccc--ccCHHHHH----HHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 35688888 9999999999999652 356888875432 11122223 3488999999999999999999984
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
. + ..++||||+++++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+||
T Consensus 89 ~-~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Ni 148 (291)
T 1xbb_A 89 A-E--------------SWMLVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 148 (291)
T ss_dssp S-S--------------SEEEEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred C-C--------------CcEEEEEeCCCCCHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceE
Confidence 3 2 46999999999999999976 24699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||+++
T Consensus 149 l~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 210 (291)
T 1xbb_A 149 LLVTQ-------HYAKISDFGLSKALRADENYY-------KAQTHGKWPVKWYAPECINY----YKFSSKSDVWSFGVLM 210 (291)
T ss_dssp EEEET-------TEEEECCCTTCEECCTTCSEE-------EC----CCCGGGCCHHHHHH----CEEEHHHHHHHHHHHH
T ss_pred EEeCC-------CcEEEccCCcceeeccCCCcc-------cccccCCCCceeeChHHhcc----CCCChhhhHHHHHHHH
Confidence 99987 789999999997654322110 01112346789999999976 4578999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1036 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1036 ~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|+|++ |..||.+....++...+..+..+..+. .+++.+.+++.+||+.||.+
T Consensus 211 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~~ 263 (291)
T 1xbb_A 211 WEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA---------------------------GCPREMYDLMNLCWTYDVEN 263 (291)
T ss_dssp HHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhh
Confidence 99999 999999988888877776655433221 34456999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001152 1115 RPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~ 1128 (1137)
||++.++++.+...
T Consensus 264 Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 264 RPGFAAVELRLRNY 277 (291)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHH
Confidence 99999999887653
No 189
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.9e-37 Score=345.19 Aligned_cols=280 Identities=23% Similarity=0.340 Sum_probs=200.7
Q ss_pred CCCCCC--CCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCc
Q 001152 796 LDPGSF--PSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI 867 (1137)
Q Consensus 796 ~~~~~~--~~y~l~~~LG~GsfG~Vy~a~~------~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNI 867 (1137)
+++..+ .+|++.+.||+|+||.||+|++ .+..+|+|+...... ....+ .+.+|+.+++.++||||
T Consensus 13 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~----~~~~E~~~l~~l~h~~i 85 (302)
T 4e5w_A 13 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIA----DLKKEIEILRNLYHENI 85 (302)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHH----HHHHHHHHHHTCCCTTB
T ss_pred cChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhHH----HHHHHHHHHHhCCCCCe
Confidence 344444 3589999999999999999995 457788988643321 11122 34789999999999999
Q ss_pred ceeeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Q 001152 868 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMH 947 (1137)
Q Consensus 868 Vkllg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIH 947 (1137)
+++++++..... ...++||||+++++|.+++... ...+++..++.|+.||+.||+|||++||+|
T Consensus 86 ~~~~~~~~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 149 (302)
T 4e5w_A 86 VKYKGICTEDGG------------NGIKLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLGSRQYVH 149 (302)
T ss_dssp CCEEEEEEC---------------CCEEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eeeeeEEecCCC------------ceEEEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 999999986531 1579999999999999999652 246999999999999999999999999999
Q ss_pred ccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhh
Q 001152 948 RDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVD 1027 (1137)
Q Consensus 948 rDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksD 1027 (1137)
|||||+|||++.+ +.+||+|||++.......... .......||..|+|||++.+ ..++.++|
T Consensus 150 ~dikp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~D 211 (302)
T 4e5w_A 150 RDLAARNVLVESE-------HQVKIGDFGLTKAIETDKEYY-------TVKDDRDSPVFWYAPECLMQ----SKFYIASD 211 (302)
T ss_dssp SCCSGGGEEEEET-------TEEEECCCTTCEECCTTCCEE-------ECCCCTTCCGGGCCHHHHHH----CEEEHHHH
T ss_pred CCCchheEEEcCC-------CCEEECcccccccccCCCcce-------eccCCCCCCccccCCeeecC----CCCCcchh
Confidence 9999999999887 789999999997655432110 01123468889999999876 45779999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001152 1028 IWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1107 (1137)
Q Consensus 1028 VWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~C 1107 (1137)
||||||++|+|++|..|+.. ................. ..... ..... .... ......++++.+|+.+|
T Consensus 212 i~slG~il~~l~~g~~p~~~--~~~~~~~~~~~~~~~~~--~~~~~----~~~~~-~~~~---~~~~~~~~~l~~li~~~ 279 (302)
T 4e5w_A 212 VWSFGVTLHELLTYCDSDSS--PMALFLKMIGPTHGQMT--VTRLV----NTLKE-GKRL---PCPPNCPDEVYQLMRKC 279 (302)
T ss_dssp HHHHHHHHHHHHTTTCGGGS--HHHHHHHHHCSCCGGGH--HHHHH----HHHHT-TCCC---CCCTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCCCcc--hhhHHhhccCCcccccC--HHHHH----HHHhc-cCCC---CCCCCCCHHHHHHHHHH
Confidence 99999999999999998753 21111111111100000 00000 00000 0000 01114566799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhh
Q 001152 1108 TEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1108 L~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
|+.||.+|||+.|+++.+...
T Consensus 280 l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 280 WEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp TCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999998753
No 190
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.6e-37 Score=347.97 Aligned_cols=267 Identities=22% Similarity=0.346 Sum_probs=201.8
Q ss_pred CCCceEeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~-----~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
..+|++.+.||+|+||.||+|++.. ..+|+|+.. .........+.+ .+|+.++++++||||+++++++.
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMK--LDNSSQREIEEF----LSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC-----CCCHHHHHHH----HHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEe--ccccchhHHHHH----HHHHHHHhcCCCCCeeeeeEEEe
Confidence 3579999999999999999998742 357888743 322333344444 88999999999999999999988
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~-~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
+.... .....++||||+++++|.+++..... .....+++..++.|+.||+.||.|||++||+||||||+|
T Consensus 107 ~~~~~---------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~N 177 (313)
T 3brb_A 107 EMSSQ---------GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177 (313)
T ss_dssp C----------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGG
T ss_pred ecccc---------CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcce
Confidence 64411 11246999999999999999864321 234579999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||++......... .......+++.|+|||.+.+ ..++.++||||||++
T Consensus 178 Ili~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 238 (313)
T 3brb_A 178 CMLRDD-------MTVCVADFGLSKKIYSGDYY--------RQGRIAKMPVKWIAIESLAD----RVYTSKSDVWAFGVT 238 (313)
T ss_dssp EEECTT-------SCEEECSCSCC------------------------CCGGGSCHHHHHS----SCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEeecCcceeccccccc--------CcccccCCCccccCchhhcC----CCccchhhhHHHHHH
Confidence 999877 78999999998765432211 11123457889999999875 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|+|++ |..||.+....++...+..+..+..+. .+++.+.+++.+||+.||.
T Consensus 239 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 291 (313)
T 3brb_A 239 MWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE---------------------------DCLDELYEIMYSCWRTDPL 291 (313)
T ss_dssp HHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBT---------------------------TCCHHHHHHHHHTTCSSGG
T ss_pred HHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCc---------------------------cccHHHHHHHHHHcCCChh
Confidence 999999 899998877777777666554433221 3445699999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001152 1114 ERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~ 1128 (1137)
+|||+.++++++...
T Consensus 292 ~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 292 DRPTFSVLRLQLEKL 306 (313)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999998765
No 191
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.2e-39 Score=372.35 Aligned_cols=270 Identities=13% Similarity=0.119 Sum_probs=190.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHH---HHHHhCCCCCcceee----
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEV---RMLGALRHSCIVEMY---- 871 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi---~iL~~L~HpNIVkll---- 871 (1137)
..+|++.+.||+|+||.||+|++. +..||||+........ ....+. +.+|+ .++++++|||||+++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~----~~~E~~~l~~l~~l~hpniv~~~~~~~ 146 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQ----MKEEVLRLRLLRGIKNQKQAKVHLRFI 146 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC-TTHHHH----HHHHHHGGGGSTTCCSHHHHHHHHCBC
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc-hHHHHH----HHHHHHHHHhccccCCHHHHHHHhhhh
Confidence 457999999999999999999974 6789999865432222 222333 47899 455566799999998
Q ss_pred ---eeEecCCCCC---CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001152 872 ---GHKISSKWLP---SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG--EKHVSVKLALFIAQDVAAALVELHSK 943 (1137)
Q Consensus 872 ---g~~~~~~~~~---~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~--~~~ls~~~i~~I~~QIa~gL~yLHs~ 943 (1137)
+++.+.+... ...+.........++||||+ +|+|.+++....... ...+++..++.|+.||+.||+|||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 225 (377)
T 3byv_A 147 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 225 (377)
T ss_dssp CCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 5544332000 00000001112379999999 589999998642211 13455688889999999999999999
Q ss_pred CeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc------
Q 001152 944 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH------ 1017 (1137)
Q Consensus 944 gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------ 1017 (1137)
||+||||||+|||++.+ +.+||+|||+++...... ....| +.|+|||++.+..
T Consensus 226 ~ivHrDikp~NIll~~~-------~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~~ 284 (377)
T 3byv_A 226 GLVHTYLRPVDIVLDQR-------GGVFLTGFEHLVRDGARV-------------VSSVS-RGFEPPELEARRATISYHR 284 (377)
T ss_dssp TEECSCCCGGGEEECTT-------CCEEECCGGGCEETTCEE-------------ECCCC-TTCCCHHHHHHHTSTHHHH
T ss_pred CeecCCCCHHHEEEcCC-------CCEEEEechhheecCCcc-------------cCCCC-cCccChhhhcccccccccc
Confidence 99999999999999977 789999999997533211 12357 8999999998620
Q ss_pred -CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhh
Q 001152 1018 -KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET 1096 (1137)
Q Consensus 1018 -~~~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1137)
....++.++|||||||++|||++|+.||.+....+....+... . ...
T Consensus 285 ~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~-----------------------~---------~~~ 332 (377)
T 3byv_A 285 DRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRS-----------------------C---------KNI 332 (377)
T ss_dssp CCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGSS-----------------------C---------CCC
T ss_pred cccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhhh-----------------------c---------cCC
Confidence 0015889999999999999999999999754322111111000 0 134
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1097 LSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1097 ~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
++++.+|+.+||+.||.+|||+.|+++|+|+..
T Consensus 333 ~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 333 PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 556999999999999999999999999999864
No 192
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.2e-37 Score=348.65 Aligned_cols=287 Identities=21% Similarity=0.235 Sum_probs=207.2
Q ss_pred CCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC---CCCCcceeeeeEe
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKI 875 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L---~HpNIVkllg~~~ 875 (1137)
.+|++.+.||+|+||.||+|++. +..||+|+......... ... .+.+|+.+++.+ +||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~--~~~----~~~~e~~~l~~l~~~~h~~i~~~~~~~~ 84 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MPL----STIREVAVLRHLETFEHPNVVRLFDVCT 84 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS--CBC----THHHHHHHHHHHHHTCCTTBCCEEEEEE
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc--CCc----hhhHHHHHHHhhhccCCCCeEeeeeeee
Confidence 67999999999999999999983 46789998654432211 111 225677776665 8999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
.... ......++||||++ |+|.+++... ....+++..+..++.||+.||+|||++||+||||||+||
T Consensus 85 ~~~~---------~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Ni 151 (326)
T 1blx_A 85 VSRT---------DRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151 (326)
T ss_dssp EEEC---------SSEEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred eccc---------CCCceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHe
Confidence 3210 01226799999998 7999999762 234599999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||++......... ....||+.|+|||++.+ ..++.++|||||||++
T Consensus 152 li~~~-------~~~kl~Dfg~~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 209 (326)
T 1blx_A 152 LVTSS-------GQIKLADFGLARIYSFQMAL-----------TSVVVTLWYRAPEVLLQ----SSYATPVDLWSVGCIF 209 (326)
T ss_dssp EECTT-------CCEEECSCCSCCCCCGGGGG-----------CCCCCCCTTCCHHHHTT----CCCCTHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEecCcccccccCCCCc-----------cccccccceeCHHHHhc----CCCCcchhHHHHHHHH
Confidence 99877 78999999998765432111 13468999999999875 4688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|+|++|..||.+....+....+...........+............ ..............++.+.+|+.+||+.||.+|
T Consensus 210 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 288 (326)
T 1blx_A 210 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH-SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288 (326)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSC-CCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhc-ccCcchhhhccccCCHHHHHHHHHHcCCCcccC
Confidence 9999999999988877766665432111111111000000000000 000000111112456779999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001152 1116 PTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1116 PSa~EVL~~L~~~~~ 1130 (1137)
||+.|+++|+|+...
T Consensus 289 pt~~e~l~hp~~~~~ 303 (326)
T 1blx_A 289 ISAYSALSHPYFQDL 303 (326)
T ss_dssp CCHHHHHTSGGGTTC
T ss_pred CCHHHHhcCcccccc
Confidence 999999999999743
No 193
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.2e-37 Score=358.79 Aligned_cols=285 Identities=24% Similarity=0.255 Sum_probs=201.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC--------CCCccee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--------HSCIVEM 870 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~--------HpNIVkl 870 (1137)
..+|++.++||+|+||+||+|++. +..||+|+.... ....+ .+.+|+.+++.++ ||||+++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~iv~~ 106 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTE----TALDEIRLLKSVRNSDPNDPNREMVVQL 106 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHH----HHHHHHHHHHHHHHSCTTCGGGGGBCCE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchH----HHHHHHHHHHHHhhcCCCCCCcceeeee
Confidence 367999999999999999999884 567888875321 22223 3488999999985 7889999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-Ceeecc
Q 001152 871 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRD 949 (1137)
Q Consensus 871 lg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~-gIIHrD 949 (1137)
++++..... .....++||||+ +++|.+++.. .....+++..++.|+.||+.||+|||++ ||+|||
T Consensus 107 ~~~~~~~~~----------~~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrD 172 (397)
T 1wak_A 107 LDDFKISGV----------NGTHICMVFEVL-GHHLLKWIIK---SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTD 172 (397)
T ss_dssp EEEEEEEET----------TEEEEEEEECCC-CCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCC
T ss_pred ecceeecCC----------CCceEEEEEecc-CccHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 999874210 122689999999 5777777765 2234699999999999999999999998 999999
Q ss_pred CCCCCeEeccccc------------------------------------------cCCCCCeEEEeecCccccccccccc
Q 001152 950 IKSENILIDLERK------------------------------------------KADGKPVVKLCDFDRAVPLRSFLHT 987 (1137)
Q Consensus 950 LKP~NILld~~~~------------------------------------------~~~~~~~vKL~DFGla~~~~~~~~~ 987 (1137)
|||+|||++.++. .......+||+|||++.......
T Consensus 173 ikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-- 250 (397)
T 1wak_A 173 IKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-- 250 (397)
T ss_dssp CSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS--
T ss_pred CCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC--
Confidence 9999999986520 00011379999999987654321
Q ss_pred cccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHH--c
Q 001152 988 CCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLS------ELEIHDLIQ--M 1059 (1137)
Q Consensus 988 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~------~~el~~~I~--~ 1059 (1137)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+ ..+....+. .
T Consensus 251 -----------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 315 (397)
T 1wak_A 251 -----------TEDIQTRQYRSLEVLIG----SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL 315 (397)
T ss_dssp -----------CSCCSCGGGCCHHHHHT----SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHH
T ss_pred -----------ccCCCCCcccCChhhcC----CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhc
Confidence 13368999999999986 458899999999999999999999997643 222222221 1
Q ss_pred CCCCCchhHHhhhcccccccccc-----cCCCCCC----------chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 001152 1060 GKRPRLTDELEALGSCHEHEVAQ-----SGSGFEK----------PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEM 1124 (1137)
Q Consensus 1060 g~~p~l~~~l~~~~~~~~~~~~~-----~~~~~~~----------~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~ 1124 (1137)
+..+. .+............. ....... .......++.+.+||.+||+.||++|||++||++|
T Consensus 316 ~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 316 GKVPR---KLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CSCCH---HHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCCCh---HHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 21111 100000000000000 0000000 01123567789999999999999999999999999
Q ss_pred HHhh
Q 001152 1125 FVAR 1128 (1137)
Q Consensus 1125 L~~~ 1128 (1137)
+|+.
T Consensus 393 p~~~ 396 (397)
T 1wak_A 393 PWLN 396 (397)
T ss_dssp GGGG
T ss_pred cccc
Confidence 9986
No 194
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.9e-37 Score=352.29 Aligned_cols=262 Identities=23% Similarity=0.343 Sum_probs=203.5
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceee
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 871 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkll 871 (1137)
...+|++.+.||+|+||.||+|.+.+ ..+|+|+.... ......+. +.+|+.+++++ +||||++++
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~h~~iv~~~ 116 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST---AHADEKEA----LMSELKIMSHLGQHENIVNLL 116 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCEE
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc---cChHHHHH----HHHHHHHHHhhcCCCCeeeEE
Confidence 35789999999999999999999843 25788875322 12233333 48899999999 799999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc---------CCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001152 872 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---------GEKHVSVKLALFIAQDVAAALVELHS 942 (1137)
Q Consensus 872 g~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~---------~~~~ls~~~i~~I~~QIa~gL~yLHs 942 (1137)
+++...+ ..++||||+++|+|.+++...... ....+++..++.++.||+.||+|||+
T Consensus 117 ~~~~~~~--------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 182 (333)
T 2i1m_A 117 GACTHGG--------------PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS 182 (333)
T ss_dssp EEECSSS--------------SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC--------------ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence 9998765 459999999999999999764321 12458999999999999999999999
Q ss_pred CCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCC
Q 001152 943 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1022 (1137)
Q Consensus 943 ~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1022 (1137)
+||+||||||+|||++.+ +.+||+|||++......... .......+|+.|+|||++.+ ..+
T Consensus 183 ~~ivH~Dlkp~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~ 243 (333)
T 2i1m_A 183 KNCIHRDVAARNVLLTNG-------HVAKIGDFGLARDIMNDSNY--------IVKGNARLPVKWMAPESIFD----CVY 243 (333)
T ss_dssp TTEECSCCSGGGCEEEGG-------GEEEBCCCGGGCCGGGCTTS--------EECSSCEECGGGSCHHHHHH----CCC
T ss_pred CCcccCCcccceEEECCC-------CeEEECccccccccccccce--------eecCCCCCCccccCHHHhcc----CCC
Confidence 999999999999999987 78999999999765432211 01123357889999999876 468
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-HHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHH
Q 001152 1023 GLEVDIWSYGCLLLELLT-LQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1100 (1137)
Q Consensus 1023 s~ksDVWSLGviL~ELLT-G~~Pf~~~~~~el~-~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1100 (1137)
+.++|||||||++|+|++ |..||.+....... ..+..+..+..+. ..++.+
T Consensus 244 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l 296 (333)
T 2i1m_A 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA---------------------------FAPKNI 296 (333)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCT---------------------------TCCHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCC---------------------------CCCHHH
Confidence 899999999999999998 99999875443333 3333322211110 234568
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001152 1101 VDVFRRCTEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1101 ~dLl~~CL~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
.+++.+||+.||.+|||+.||++++...
T Consensus 297 ~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 297 YSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999999998764
No 195
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.7e-37 Score=352.25 Aligned_cols=275 Identities=23% Similarity=0.330 Sum_probs=202.0
Q ss_pred CCCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~------~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
-.+|++.+.||+|+||.||+|++ .+..||+|+.... .....+. +.+|+.++++++||||+++++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~ 93 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRD----FQREIQILKALHSDFIVKYRGVS 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHH----HHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHH----HHHHHHHHHhcCCCceeEEEEEE
Confidence 35799999999999999999995 3466888875322 2333333 48899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
...+. ...++||||+++++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 94 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~N 157 (327)
T 3lxl_A 94 YGPGR------------QSLRLVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARN 157 (327)
T ss_dssp ECSSS------------CEEEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred ecCCC------------ceEEEEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhh
Confidence 75331 1679999999999999999763 2358999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 158 Il~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 219 (327)
T 3lxl_A 158 ILVESE-------AHVKIADFGLAKLLPLDKDYY-------VVREPGQSPIFWYAPESLSD----NIFSRQSDVWSFGVV 219 (327)
T ss_dssp EEEEET-------TEEEECCGGGCEECCTTCSEE-------ECSSCCCSCGGGSCHHHHHH----CEEEHHHHHHHHHHH
T ss_pred EEECCC-------CCEEEcccccceecccCCccc-------eeeccCCccccccCHHHhcc----CCCChHHhHHHHHHH
Confidence 999987 789999999997654322111 01123458889999999876 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|+|++|+.||.................+......... .. .... .....+++++.+|+.+||+.||.+
T Consensus 220 l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~---~~~~~~~~~l~~li~~~l~~dP~~ 287 (327)
T 3lxl_A 220 LYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL--------EE-GQRL---PAPPACPAEVHELMKLCWAPSPQD 287 (327)
T ss_dssp HHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH--------HT-TCCC---CCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh--------hc-ccCC---CCCCcccHHHHHHHHHHcCCChhh
Confidence 99999999999753222111100110111001000000 00 0000 001245677999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001152 1115 RPTAGDLYEMFVART 1129 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~ 1129 (1137)
|||++|+++++....
T Consensus 288 Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 288 RPSFSALGPQLDMLW 302 (327)
T ss_dssp SCCHHHHHHHHHHC-
T ss_pred CcCHHHHHHHHHHHH
Confidence 999999999988753
No 196
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-37 Score=343.27 Aligned_cols=259 Identities=21% Similarity=0.325 Sum_probs=202.0
Q ss_pred CceEeeeecccCceEEEEEEECC--c---cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 803 SLSSCDEAGKSVSSSLFRCKFGS--A---DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 803 ~y~l~~~LG~GsfG~Vy~a~~~~--~---~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
.|.+.++||+|+||+||+|.+.. . .+|+|+. .. .......+. +.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~--~~-~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~ 94 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SR-ITEMQQVEA----FLREGLLMRGLNHPNVLALIGIMLPP 94 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEE--TT-CCSHHHHHH----HHHHHHHHHTCCCTTBCCCCEEECCS
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeec--cc-cccHHHHHH----HHHHHHHHHhCCCCCeeeEEEEEecC
Confidence 46778999999999999998732 2 4666664 22 222333334 48899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+. ..++||||+.+++|.+++.. ....+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 95 ~~-------------~~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili 157 (298)
T 3pls_A 95 EG-------------LPHVLLPYMCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML 157 (298)
T ss_dssp SS-------------CCEEEECCCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CC-------------CcEEEEecccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE
Confidence 41 34899999999999999975 23568999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||++.......... ........+|+.|+|||.+.+ ..++.++|||||||++|+
T Consensus 158 ~~~-------~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 220 (298)
T 3pls_A 158 DES-------FTVKVADFGLARDILDREYYS------VQQHRHARLPVKWTALESLQT----YRFTTKSDVWSFGVLLWE 220 (298)
T ss_dssp CTT-------CCEEECCTTSSCTTTTGGGGC------SCCSSCTTCGGGGSCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred cCC-------CcEEeCcCCCcccccCCcccc------cccCcCCCCCccccChhhhcc----CCCChhhchhhHHHHHHH
Confidence 877 789999999997654322111 111223468889999999975 568899999999999999
Q ss_pred HHhC-CCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1038 LLTL-QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1038 LLTG-~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
|++| .+||......++...+..+.....+. ..++.+.+++.+||+.||.+||
T Consensus 221 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rp 273 (298)
T 3pls_A 221 LLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE---------------------------YCPDSLYQVMQQCWEADPAVRP 273 (298)
T ss_dssp HHHTSCCTTTTSCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred HhhCCCCCCccCCHHHHHHHhhcCCCCCCCc---------------------------cchHHHHHHHHHHccCChhhCc
Confidence 9994 55566666666666665554332211 2345699999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001152 1117 TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~ 1129 (1137)
|+.++++.+....
T Consensus 274 s~~~ll~~l~~~~ 286 (298)
T 3pls_A 274 TFRVLVGEVEQIV 286 (298)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999987753
No 197
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.2e-37 Score=356.12 Aligned_cols=295 Identities=16% Similarity=0.154 Sum_probs=207.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCCh---HHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSA---DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~---~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
..+|++.+.||+|+||.||+|.+. +..||+|+.......... ........++.+|+.++++++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 357999999999999999999874 577999986443222110 1111222345899999999999999999999865
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
... ......++||||++ |+|.+++.. ....+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 101 ~~~---------~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 101 FEE---------PAMHKLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL 166 (362)
T ss_dssp CCT---------TTCCEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred ccC---------CCcceEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEE
Confidence 321 11236899999997 799988864 2346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||++........ .....||+.|+|||++.+ ...++.++|||||||++|
T Consensus 167 ~~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 225 (362)
T 3pg1_A 167 LADN-------NDITICDFNLAREDTADAN-----------KTHYVTHRWYRAPELVMQ---FKGFTKLVDMWSAGCVMA 225 (362)
T ss_dssp ECTT-------CCEEECCTTC--------------------------CGGGCCHHHHTT---CTTCCTHHHHHHHHHHHH
T ss_pred EcCC-------CCEEEEecCcccccccccc-----------cceecccceecCcHHhcC---CCCCCcHhHHHhHHHHHH
Confidence 9877 7899999999874433211 123468999999999874 246889999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHc-CCCCCchhHHhhhcccccccccccC---CCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1037 ELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSG---SGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1037 ELLTG~~Pf~~~~~~el~~~I~~-g~~p~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
+|++|+.||.+....+....+.. ...+..................... ............++.+.+|+.+||+.||
T Consensus 226 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 305 (362)
T 3pg1_A 226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNP 305 (362)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSG
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCCh
Confidence 99999999998887776666533 2222222111000000000000000 0001111223456779999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001152 1113 TERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~ 1130 (1137)
.+|||++|+++|+|+..-
T Consensus 306 ~~Rpt~~ell~hp~f~~~ 323 (362)
T 3pg1_A 306 QRRISTEQALRHPYFESL 323 (362)
T ss_dssp GGSCCHHHHHTSGGGTTT
T ss_pred hhCCCHHHHHcCchhhhc
Confidence 999999999999999754
No 198
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.6e-37 Score=349.11 Aligned_cols=263 Identities=23% Similarity=0.359 Sum_probs=203.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 872 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg 872 (1137)
..+|++.+.||+|+||+||+|++. +..||+|+.... ......+. +.+|+.+++++ +||||+++++
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRA----LMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC---CCcHHHHH----HHHHHHHHHhcccCCCeeeEEE
Confidence 467999999999999999999852 356888875422 12333333 48899999999 6999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHH
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVELH 941 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~-----------~~~~ls~~~i~~I~~QIa~gL~yLH 941 (1137)
++...+. ..++||||+++++|.+++...... ....+++..++.++.||+.||+|||
T Consensus 99 ~~~~~~~-------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 165 (316)
T 2xir_A 99 ACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 165 (316)
T ss_dssp EECCTTS-------------CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------------ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH
Confidence 9876431 469999999999999999763211 0123899999999999999999999
Q ss_pred hCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCC
Q 001152 942 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1021 (1137)
Q Consensus 942 s~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1021 (1137)
++||+||||||+|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+ ..
T Consensus 166 ~~~i~H~dikp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~ 226 (316)
T 2xir_A 166 SRKCIHRDLAARNILLSEK-------NVVKICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RV 226 (316)
T ss_dssp HTTCCCSCCSGGGEEECGG-------GCEEECCCGGGSCTTTCTTS--------EEETTEEECGGGCCHHHHHH----CC
T ss_pred hCCcccccCccceEEECCC-------CCEEECCCccccccccCccc--------eeccCCCcceeecCchhhcc----cc
Confidence 9999999999999999877 78999999998765432111 01113457889999999876 56
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCH-HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHH
Q 001152 1022 YGLEVDIWSYGCLLLELLT-LQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1099 (1137)
Q Consensus 1022 ~s~ksDVWSLGviL~ELLT-G~~Pf~~~~~-~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1137)
++.++|||||||++|+|++ |..||.+... ..+...+..+.....+. ..++.
T Consensus 227 ~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~ 279 (316)
T 2xir_A 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD---------------------------YTTPE 279 (316)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCT---------------------------TCCHH
T ss_pred ccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCC---------------------------CCCHH
Confidence 8899999999999999998 9999987543 33444444443322211 23456
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1100 LVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1100 L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
+.+++.+||+.||.+|||+.||++++....
T Consensus 280 l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999999999999998654
No 199
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.4e-37 Score=372.62 Aligned_cols=256 Identities=22% Similarity=0.390 Sum_probs=208.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..+|++.++||+|+||.||+|.+. +..||||+. +.... ..+. +.+|+.+|++++|||||++++++....
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~--~~~~~---~~~~----~~~E~~~l~~l~hpniv~l~~~~~~~~ 289 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTM---EVEE----FLKEAAVMKEIKHPNLVQLLGVCTREP 289 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEEC--CSSSS---CHHH----HHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEe--cCccc---chHH----HHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 457899999999999999999996 456777764 32221 1233 388999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||+++|+|.++++. .....+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 290 --------------~~~lv~E~~~~g~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~ 352 (495)
T 1opk_A 290 --------------PFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 352 (495)
T ss_dssp --------------SCEEEEECCTTCBHHHHHHH---SCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------cEEEEEEccCCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC
Confidence 45999999999999999976 2335689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||+++........ ......+++.|+|||++.+ ..++.++|||||||++|||
T Consensus 353 ~~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwSlG~~l~el 412 (495)
T 1opk_A 353 EN-------HLVKVADFGLSRLMTGDTYT---------AHAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLWEI 412 (495)
T ss_dssp GG-------GCEEECCTTCEECCTTCCEE---------CCTTCCCCGGGCCHHHHHH----CEECHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeecccceeccCCcee---------ecCCCcCCcceeCHhHHhc----CCCCcHHhHHhHHHHHHHH
Confidence 87 78999999999765432211 1112346789999999976 4678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1039 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1039 LT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
++ |..||.+.+..++...+..+.....+. .+++.+.+|+.+||+.||.+|||
T Consensus 413 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~RPs 465 (495)
T 1opk_A 413 ATYGMSPYPGIDLSQVYELLEKDYRMERPE---------------------------GCPEKVYELMRACWQWNPSDRPS 465 (495)
T ss_dssp HTTSCCSSTTCCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCcChhHCcC
Confidence 99 999999887777777666544322211 34556999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001152 1118 AGDLYEMFVART 1129 (1137)
Q Consensus 1118 a~EVL~~L~~~~ 1129 (1137)
+.+|++.+....
T Consensus 466 ~~el~~~L~~~~ 477 (495)
T 1opk_A 466 FAEIHQAFETMF 477 (495)
T ss_dssp HHHHHHHHHTSC
T ss_pred HHHHHHHHHHHH
Confidence 999999987653
No 200
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.8e-37 Score=351.35 Aligned_cols=273 Identities=22% Similarity=0.275 Sum_probs=203.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..+|++.+.||+|+||.||+|++. +..||+|+........ . ..++.+|+.+++.++||||+++++++....
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~----~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~- 100 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG---G----ELQFQTEVEMISMAVHRNLLRLRGFCMTPT- 100 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------C----CCHHHHHHHGGGTCCCTTBCCCCEEECCSS-
T ss_pred hhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch---H----HHHHHHHHHHHHhccCCCccceEEEEecCC-
Confidence 467999999999999999999874 5789999854322111 1 113478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCCCCeE
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---HIMHRDIKSENIL 956 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~---gIIHrDLKP~NIL 956 (1137)
..++||||+++++|.+++.... .....+++..+..|+.||+.||+|||++ ||+||||||+|||
T Consensus 101 -------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil 166 (326)
T 3uim_A 101 -------------ERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL 166 (326)
T ss_dssp -------------CCEEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEE
T ss_pred -------------ceEEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEE
Confidence 4599999999999999997632 2234699999999999999999999999 9999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 167 ~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~ 226 (326)
T 3uim_A 167 LDEE-------FEAVVGDFGLAKLMDYKDTH---------VTTAVRGTIGHIAPEYLST----GKSSEKTDVFGYGVMLL 226 (326)
T ss_dssp ECTT-------CCEEECCCSSCEECCSSSSC---------EECCCCSCGGGCCHHHHHH----SEECHHHHHHHHHHHHH
T ss_pred ECCC-------CCEEeccCccccccCccccc---------ccccccCCcCccCHHHhcc----CCCCccccchhHHHHHH
Confidence 9977 78999999999765432211 1123459999999999876 45789999999999999
Q ss_pred HHHhCCCCCCCC-----CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001152 1037 ELLTLQVPYMGL-----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1111 (1137)
Q Consensus 1037 ELLTG~~Pf~~~-----~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~D 1111 (1137)
+|++|..||... .......++....... ..................++.+.+++.+||+.|
T Consensus 227 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 292 (326)
T 3uim_A 227 ELITGQRAFDLARLANDDDVMLLDWVKGLLKEK--------------KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 292 (326)
T ss_dssp HHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC--------------CSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSC
T ss_pred HHHhCCCcccccccccccchhHHHHHHHHhhch--------------hhhhhcChhhccccCHHHHHHHHHHHHHHhCcC
Confidence 999999999521 1111111111111000 000000000111122366788999999999999
Q ss_pred CCCCCCHHHHHHHHHhhc
Q 001152 1112 PTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1112 P~~RPSa~EVL~~L~~~~ 1129 (1137)
|.+|||+.||+++|+...
T Consensus 293 P~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 293 PMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp GGGSCCHHHHHHHHHTSS
T ss_pred CccCCCHHHHHHHhcCcc
Confidence 999999999999998754
No 201
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.4e-37 Score=370.37 Aligned_cols=256 Identities=25% Similarity=0.360 Sum_probs=204.8
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..+|++.++||+|+||.||+|.+.+ ..||||+.... ... .+. +.+|+.+|++++||||+++++++.+ .
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~---~~~----~~~E~~~l~~l~hp~iv~~~~~~~~-~- 251 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMS---PEA----FLQEAQVMKKLRHEKLVQLYAVVSE-E- 251 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT--SSC---HHH----HHHHHHHHHHCCCTTBCCEEEEECS-S-
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccC--CCC---HHH----HHHHHHHHHhCCCCCEeeEEEEEcC-C-
Confidence 4569999999999999999999975 56888874322 211 223 3789999999999999999999864 2
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++|+|.++++... ...+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 252 -------------~~~iv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~ 315 (452)
T 1fmk_A 252 -------------PIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 315 (452)
T ss_dssp -------------SCEEEECCCTTCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred -------------ceEEEehhhcCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECC
Confidence 3599999999999999997521 235899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 316 ~-------~~~kl~DfG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwslG~~l~el~ 375 (452)
T 1fmk_A 316 N-------LVCKVADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELT 375 (452)
T ss_dssp G-------GCEEECCCCTTC-----------------------CCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEECCCccceecCCCcee---------cccCCcccccccCHhHHhc----CCCCccccHHhHHHHHHHHH
Confidence 7 78999999999765432111 1112346789999999876 46889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 T-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+ |..||.+....++...+..+.....+. .+++.+.+|+.+||+.||++|||+
T Consensus 376 t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~Rpt~ 428 (452)
T 1fmk_A 376 TKGRVPYPGMVNREVLDQVERGYRMPCPP---------------------------ECPESLHDLMCQCWRKEPEERPTF 428 (452)
T ss_dssp TTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCcCH
Confidence 9 999999988888888777655433221 345569999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
++|++.+.....
T Consensus 429 ~~l~~~L~~~~~ 440 (452)
T 1fmk_A 429 EYLQAFLEDYFT 440 (452)
T ss_dssp HHHHHHHHTTTS
T ss_pred HHHHHHHHHHhc
Confidence 999999887644
No 202
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=361.56 Aligned_cols=263 Identities=22% Similarity=0.336 Sum_probs=194.3
Q ss_pred CCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
..|++.+.||+|+||+||+|++. +..+.|+++.++... .....+. +.+|+.++++++||||+++++++...+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~----~~~E~~il~~l~hpnIv~~~~~~~~~~ 163 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQ----FLTEGIIMKDFSHPNVLSLLGICLRSE 163 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHH----HHHHHTTSTTCCCTTBCCCCEEECCCS
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHH----HHHHHHHHHhCCCCCcceEEEEEEcCC
Confidence 35788999999999999999873 233333333343322 2233334 488999999999999999999875432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
. ..++||||+++|+|.++++. ....+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 164 ~-------------~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 226 (373)
T 3c1x_A 164 G-------------SPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 226 (373)
T ss_dssp S-------------CCEEEEECCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred C-------------CeEEEEECCCCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC
Confidence 1 45899999999999999975 234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||+++......... ........+|+.|+|||++.+ ..++.++|||||||++|||
T Consensus 227 ~~-------~~~kL~DFG~a~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwSlG~il~el 289 (373)
T 3c1x_A 227 EK-------FTVKVADFGLARDMYDKEFDS------VHNKTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVLLWEL 289 (373)
T ss_dssp TT-------CCEEECCC---------------------------CCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccccccccccccc------ccccCCCCCcccccChHHhcC----CCCCcHHHHHHHHHHHHHH
Confidence 77 789999999997654321110 011123357889999999976 5688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1039 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1039 LT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
++ |.+||......++...+..+..+..+. .+++.+.+++.+||+.||++|||
T Consensus 290 lt~~~~p~~~~~~~~~~~~~~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dp~~RPs 342 (373)
T 3c1x_A 290 MTRGAPPYPDVNTFDITVYLLQGRRLLQPE---------------------------YCPDPLYEVMLKCWHPKAEMRPS 342 (373)
T ss_dssp HTTSCCSCTTSCSSCHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCcCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhhCcC
Confidence 99 788887766655655565544322211 34456999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001152 1118 AGDLYEMFVARTS 1130 (1137)
Q Consensus 1118 a~EVL~~L~~~~~ 1130 (1137)
+.|+++++.....
T Consensus 343 ~~ell~~L~~i~~ 355 (373)
T 3c1x_A 343 FSELVSRISAIFS 355 (373)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987643
No 203
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.4e-37 Score=358.42 Aligned_cols=283 Identities=19% Similarity=0.194 Sum_probs=206.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|.+.+.||+|+||.||+|.+. +..||+|+.... .......+ ++.+|+.+++.++||||+++++++.....
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 115 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP--FQSEIFAK----RAYRELLLLKHMQHENVIGLLDVFTPASS 115 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECST--TSSHHHHH----HHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccc--ccchhHHH----HHHHHHHHHHhcCCCCchhhhhheeccCC
Confidence 57999999999999999999985 567888875322 22222223 34889999999999999999999986542
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
. ......++||||+. ++|.+++. ..+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 116 ~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~ 179 (371)
T 4exu_A 116 L--------RNFYDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE 179 (371)
T ss_dssp S--------TTCCCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred c--------ccceeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECC
Confidence 1 11224599999997 78888763 24999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+++...... ....||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 180 ~-------~~~kL~Dfg~a~~~~~~~-------------~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el~ 236 (371)
T 4exu_A 180 D-------CELKILDFGLARHADAEM-------------TGYVVTRWYRAPEVILS---WMHYNQTVDIWSVGCIMAEML 236 (371)
T ss_dssp T-------CCEEECSTTCC---------------------CTTCCCTTSCHHHHSC---CSCCCTTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEecCcccccccCc-------------CCcccCccccCHHHhcC---CCCCCcHHhHHHHHHHHHHHH
Confidence 7 789999999987543321 13468999999999874 246889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccC---CCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG---SGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|..||.+.+..+....+........................+.. ............++++.+|+.+||+.||.+||
T Consensus 237 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 316 (371)
T 4exu_A 237 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL 316 (371)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSC
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcC
Confidence 999999998877776666332211111111110000000000000 00001111124567899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001152 1117 TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~ 1129 (1137)
|++|+++|+|+..
T Consensus 317 t~~ell~hp~f~~ 329 (371)
T 4exu_A 317 TAAQALTHPFFEP 329 (371)
T ss_dssp CHHHHHTSGGGTT
T ss_pred CHHHHhcCccccc
Confidence 9999999999974
No 204
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.6e-37 Score=340.59 Aligned_cols=262 Identities=22% Similarity=0.292 Sum_probs=200.4
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|.+. +..+|+|+..... +.+ .+|+.++++++||||+++++++....+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 78 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKA----EREVKALAKLDHVNIVHYNGCWDGFDY 78 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGG----HHHHHHHHHCCCTTBCCEEEEEEEEEE
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHH----HHHHHHHHhCCCCCEEEEeeeEecccc
Confidence 46899999999999999999985 6788999864321 122 679999999999999999998864221
Q ss_pred CCCC--CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 880 LPSA--DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 880 ~~~~--~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
.+.. ...........++||||+++++|.+++.... ...+++..++.|+.||+.||.|||++||+||||||+|||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~ 155 (284)
T 2a19_B 79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL 155 (284)
T ss_dssp C---------CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CcccccccccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE
Confidence 0000 0000011235799999999999999997632 2469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||++........ .....||+.|+|||++.+ ..++.++||||||+++|+
T Consensus 156 ~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 213 (284)
T 2a19_B 156 VDT-------KQVKIGDFGLVTSLKNDGK-----------RTRSKGTLRYMSPEQISS----QDYGKEVDLYALGLILAE 213 (284)
T ss_dssp EET-------TEEEECCCTTCEESSCCSC-----------CCCCCSCCTTSCHHHHHC----SCCCTHHHHHHHHHHHHH
T ss_pred cCC-------CCEEECcchhheecccccc-----------ccccCCcccccChhhhcc----CCCcchhhhHHHHHHHHH
Confidence 987 7899999999876543211 113468999999999875 467899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
|++|..||.. .......+.....+ ...++.+.+++.+||+.||.+|||
T Consensus 214 l~~~~~~~~~--~~~~~~~~~~~~~~------------------------------~~~~~~~~~li~~~l~~dp~~Rps 261 (284)
T 2a19_B 214 LLHVCDTAFE--TSKFFTDLRDGIIS------------------------------DIFDKKEKTLLQKLLSKKPEDRPN 261 (284)
T ss_dssp HHSCCSSHHH--HHHHHHHHHTTCCC------------------------------TTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhcCCcchh--HHHHHHHhhccccc------------------------------ccCCHHHHHHHHHHccCChhhCcC
Confidence 9999988742 12222222221111 023445899999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001152 1118 AGDLYEMFVARTSSS 1132 (1137)
Q Consensus 1118 a~EVL~~L~~~~~ss 1132 (1137)
+.|++++++......
T Consensus 262 ~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 262 TSEILRTLTVWKKSP 276 (284)
T ss_dssp HHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHhhCC
Confidence 999999999986644
No 205
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-37 Score=342.72 Aligned_cols=254 Identities=24% Similarity=0.389 Sum_probs=205.1
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..+|++.+.||+|+||.||+|.+.+ ..+|+|+..... .. .+. +.+|+.++++++||||+++++++...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~---~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~-- 80 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MS---PDA----FLAEANLMKQLQHQRLVRLYAVVTQE-- 80 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SC---HHH----HHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--cc---HHH----HHHHHHHHHhCCCcCcceEEEEEcCC--
Confidence 3679999999999999999999865 578888754221 11 222 37899999999999999999987643
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 81 -------------~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~ 144 (279)
T 1qpc_A 81 -------------PIYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 144 (279)
T ss_dssp -------------SCEEEEECCTTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred -------------CcEEEEecCCCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcC
Confidence 3489999999999999986421 135899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 145 ~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~el~ 204 (279)
T 1qpc_A 145 T-------LSCKIADFGLARLIEDNEYT---------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIV 204 (279)
T ss_dssp T-------SCEEECCCTTCEECSSSCEE---------CCTTCCCCTTTSCHHHHHH----CEECHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEECCCcccccccCcccc---------cccCCCCccCccChhhhcc----CCCCchhhhHHHHHHHHHHH
Confidence 7 78999999999765432211 1112357889999999875 45789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 T-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+ |..||.+....++...+..+..+..+. .+++++.+++.+||+.||++|||+
T Consensus 205 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps~ 257 (279)
T 1qpc_A 205 THGRIPYPGMTNPEVIQNLERGYRMVRPD---------------------------NCPEELYQLMRLCWKERPEDRPTF 257 (279)
T ss_dssp TTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCcccCHHHHHHHHhcccCCCCcc---------------------------cccHHHHHHHHHHhccChhhCCCH
Confidence 9 999999888877777776554322211 334569999999999999999999
Q ss_pred HHHHHHHHhh
Q 001152 1119 GDLYEMFVAR 1128 (1137)
Q Consensus 1119 ~EVL~~L~~~ 1128 (1137)
+++++.+...
T Consensus 258 ~~l~~~l~~~ 267 (279)
T 1qpc_A 258 DYLRSVLEDF 267 (279)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987654
No 206
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=362.36 Aligned_cols=291 Identities=20% Similarity=0.254 Sum_probs=187.2
Q ss_pred ceE-eeeecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 804 LSS-CDEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 804 y~l-~~~LG~GsfG~Vy~a~~~----~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
|++ .++||+|+||+||+|++. +..||+|+.. ..... + .+.+|+.+|+.++|||||++++++....
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~--~~~~~----~----~~~~E~~~l~~l~hpniv~~~~~~~~~~ 91 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE--GTGIS----M----SACREIALLRELKHPNVISLQKVFLSHA 91 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECS--SSSCC----H----HHHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEEC--CCCCC----H----HHHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence 555 468999999999999964 4678888743 22211 1 2378999999999999999999996532
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~----~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
. ...++||||+. ++|.+++...... ....+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 92 ~------------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~N 158 (405)
T 3rgf_A 92 D------------RKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPAN 158 (405)
T ss_dssp T------------TEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred C------------CeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHH
Confidence 1 16799999996 7898888643321 12359999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||+..+ ....+.+||+|||+++........ ........||+.|+|||++.+ ...++.++|||||||+
T Consensus 159 Ill~~~---~~~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlG~i 225 (405)
T 3rgf_A 159 ILVMGE---GPERGRVKIADMGFARLFNSPLKP-------LADLDPVVVTFWYRAPELLLG---ARHYTKAIDIWAIGCI 225 (405)
T ss_dssp EEECCS---STTTTCEEECCTTCCC-----------------------CCCTTCCHHHHTT---CCSCCHHHHHHHHHHH
T ss_pred eEEecC---CCCCCcEEEEECCCceecCCCCcc-------cccCCCceecCcccCchhhcC---CCcccchhhhHHHHHH
Confidence 999432 112278999999999765432111 011124579999999999875 2458899999999999
Q ss_pred HHHHHhCCCCCCCCCHH---------HHHHHH-HcCCCCCchhHHhhhccccccc-c-cccC-CCCCCch-------hhh
Q 001152 1035 LLELLTLQVPYMGLSEL---------EIHDLI-QMGKRPRLTDELEALGSCHEHE-V-AQSG-SGFEKPE-------AEL 1094 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~---------el~~~I-~~g~~p~l~~~l~~~~~~~~~~-~-~~~~-~~~~~~~-------~~~ 1094 (1137)
+|+|++|..||.+.... +....+ .....+... .+.......... . .... ..+.... ...
T Consensus 226 l~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (405)
T 3rgf_A 226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK-DWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV 304 (405)
T ss_dssp HHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTT-TCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTC
T ss_pred HHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChh-hcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCC
Confidence 99999999999764431 222232 111111100 000000000000 0 0000 0000000 000
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001152 1095 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1095 ~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~s 1131 (1137)
..++.+.+||.+||+.||.+|||++|+++|+|+....
T Consensus 305 ~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 305 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp CTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 1245689999999999999999999999999998653
No 207
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.9e-37 Score=355.34 Aligned_cols=282 Identities=14% Similarity=0.123 Sum_probs=200.6
Q ss_pred CCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHH----hHHhHHHHHHHHHhCCCCCcce
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRN----FEYSCLGEVRMLGALRHSCIVE 869 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAVKi~~l~~~~~~~~~~e~----~~~~~lrEi~iL~~L~HpNIVk 869 (1137)
-.+|++.+.||+|+||.||+|.+.. ..||+|+....... ...+.+. ....+.+|+..+..++||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHH-HHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchh-HHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 3579999999999999999999843 57899986433210 0011111 1112356777888899999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Q 001152 870 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRD 949 (1137)
Q Consensus 870 llg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrD 949 (1137)
+++++..... .....++||||+ +++|.+++.. ....+++..++.|+.||+.||+|||++||+|||
T Consensus 113 ~~~~~~~~~~----------~~~~~~lv~e~~-g~~L~~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrD 177 (364)
T 3op5_A 113 YWGSGLHDKN----------GKSYRFMIMDRF-GSDLQKIYEA----NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGD 177 (364)
T ss_dssp EEEEEEEEET----------TEEEEEEEEECE-EEEHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred EEeeeeeccC----------CcceEEEEEeCC-CCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEec
Confidence 9999876421 112579999999 8999999976 235699999999999999999999999999999
Q ss_pred CCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHH
Q 001152 950 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW 1029 (1137)
Q Consensus 950 LKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVW 1029 (1137)
|||+|||++.+. .+.+||+|||+++.......... ..........||+.|+|||++.+ ..++.++|||
T Consensus 178 lkp~Nill~~~~-----~~~~kl~DFG~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~ 245 (364)
T 3op5_A 178 IKASNLLLNYKN-----PDQVYLVDYGLAYRYCPEGVHKA---YAADPKRCHDGTIEFTSIDAHNG----VAPSRRGDLE 245 (364)
T ss_dssp CCGGGEEEESSC-----TTCEEECCCTTCEESSGGGCCCC---SSCCSSCCCCCCTTTCCHHHHTT----CCCCHHHHHH
T ss_pred CCHHHEEEecCC-----CCeEEEEECCcceecccCCcccc---cccCcccccCCCCCccCHHHhCC----CCCCchhhHH
Confidence 999999998321 17899999999976654321110 01111234569999999999875 4689999999
Q ss_pred HHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001152 1030 SYGCLLLELLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1108 (1137)
Q Consensus 1030 SLGviL~ELLTG~~Pf~~~~-~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL 1108 (1137)
||||++|||++|+.||.+.. .............+.+...+... .. ...+++++.+++..||
T Consensus 246 slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-------~~~~~~~~~~li~~cl 307 (364)
T 3op5_A 246 ILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKC-----------FP-------AANAPGEIAKYMETVK 307 (364)
T ss_dssp HHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHH-----------SC-------TTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHh-----------cc-------cccCHHHHHHHHHHHh
Confidence 99999999999999998532 22222222111111111111100 00 0134667999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhh
Q 001152 1109 EENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1109 ~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
+.||.+||++++|++.+...
T Consensus 308 ~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 308 LLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp TCCTTCCCCHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999887654
No 208
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-37 Score=347.32 Aligned_cols=264 Identities=23% Similarity=0.244 Sum_probs=197.5
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
...+.+|++.+.||+|+||.||+|.+. +..||+|+...... ........+.+|+.++++++||||+++++++.
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~ 104 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-----SDPVFRTRMQREARTAGRLQEPHVVPIHDFGE 104 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-----GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-----cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence 445789999999999999999999985 56788887532211 11122234588999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
..+ ..++||||+++++|.+++... ..+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 105 ~~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NI 165 (309)
T 2h34_A 105 IDG--------------QLYVDMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENI 165 (309)
T ss_dssp ETT--------------EEEEEEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred eCC--------------eEEEEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHE
Confidence 765 679999999999999999762 3689999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||++......... ......||+.|+|||++.+ ..++.++||||||+++
T Consensus 166 l~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 225 (309)
T 2h34_A 166 LVSAD-------DFAYLVDFGIASATTDEKLT---------QLGNTVGTLYYMAPERFSE----SHATYRADIYALTCVL 225 (309)
T ss_dssp EECTT-------SCEEECSCCC-------------------------CCGGGCCGGGTCC--------CCCHHHHHHHHH
T ss_pred EEcCC-------CCEEEecCccCccccccccc---------cccccCCCcCccCHHHHcC----CCCCchHhHHHHHHHH
Confidence 99877 78999999998755432111 1123468999999999875 4678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
|+|++|..||.+.....+...+..... .... .....++++.+++.+||+.||.+|
T Consensus 226 ~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~------------------------~~~~~~~~l~~li~~~l~~dP~~R 280 (309)
T 2h34_A 226 YECLTGSPPYQGDQLSVMGAHINQAIP-RPST------------------------VRPGIPVAFDAVIARGMAKNPEDR 280 (309)
T ss_dssp HHHHHSSCSSCSCHHHHHHHHHHSCCC-CGGG------------------------TSTTCCTHHHHHHHHHTCSSGGGS
T ss_pred HHHHHCCCCCCCchHHHHHHHhccCCC-Cccc------------------------cCCCCCHHHHHHHHHhccCCHHHH
Confidence 999999999987665544444433221 1100 001344569999999999999999
Q ss_pred C-CHHHHHHHHHhhcC
Q 001152 1116 P-TAGDLYEMFVARTS 1130 (1137)
Q Consensus 1116 P-Sa~EVL~~L~~~~~ 1130 (1137)
| +++++++.+.....
T Consensus 281 p~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 281 YVTCGDLSAAAHAALA 296 (309)
T ss_dssp CSSHHHHHHHHHHTCC
T ss_pred HHhHHHHHHHHHHHHH
Confidence 9 99999999887643
No 209
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=342.62 Aligned_cols=260 Identities=26% Similarity=0.359 Sum_probs=197.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..|.....||+|+||.||+|.+. +..||+|+..... ....+. +.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~~- 92 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQP----LHEEIALHKHLKHKNIVQYLGSFSENG- 92 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C---HH----HHHHHHHHHTCCCTTBCCEEEEEEETT-
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHHHH----HHHHHHHHHhCCCCCEeeEeeEEEeCC-
Confidence 44555568999999999999985 4567888654221 112222 478999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..++||||+++++|.+++... .....+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 93 -------------~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~ 157 (295)
T 2clq_A 93 -------------FIKIFMEQVPGGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 157 (295)
T ss_dssp -------------EEEEEEECCSEEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET
T ss_pred -------------cEEEEEEeCCCCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC
Confidence 679999999999999999762 22346789999999999999999999999999999999999986
Q ss_pred -ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 960 -ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 960 -~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
+ +.+||+|||++........ ......||+.|+|||++.+. ...++.++||||||+++|+|
T Consensus 158 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~--~~~~~~~~Di~slG~il~~l 218 (295)
T 2clq_A 158 YS-------GVLKISDFGTSKRLAGINP----------CTETFTGTLQYMAPEIIDKG--PRGYGKAADIWSLGCTIIEM 218 (295)
T ss_dssp TT-------CCEEECCTTTCEESCC---------------CCCCCCGGGCCHHHHHHG--GGGCSHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccccccCCCCC----------cccccCCCccccChhhhcCC--CCCCCcHHHHHHHHHHHHHH
Confidence 4 6899999999876543211 11234689999999998752 13478999999999999999
Q ss_pred HhCCCCCCCCCHHHH-H-HHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1039 LTLQVPYMGLSELEI-H-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el-~-~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
++|..||........ . ........+.++ ...++++.+++.+||+.||++||
T Consensus 219 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~dp~~Rp 271 (295)
T 2clq_A 219 ATGKPPFYELGEPQAAMFKVGMFKVHPEIP---------------------------ESMSAEAKAFILKCFEPDPDKRA 271 (295)
T ss_dssp HHTSCTTGGGSSHHHHHHHHHHHCCCCCCC---------------------------TTSCHHHHHHHHHTTCSSTTTSC
T ss_pred HHCCCCccCCCchhHHHHhhcccccccccc---------------------------ccCCHHHHHHHHHHccCChhhCC
Confidence 999999975432221 1 111111111111 13455699999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001152 1117 TAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~s 1131 (1137)
|++|+++|+|+....
T Consensus 272 s~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 272 CANDLLVDEFLKVSS 286 (295)
T ss_dssp CHHHHHTSGGGCC--
T ss_pred CHHHHhcChhhhhcc
Confidence 999999999998543
No 210
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=349.18 Aligned_cols=291 Identities=20% Similarity=0.231 Sum_probs=197.8
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
...+.+|++.+.||+|+||.||+|++.+..||+|++.... ...+ ....|+..+..++||||+++++++...
T Consensus 9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-------~~~~--~~e~~~~~~~~~~h~~i~~~~~~~~~~ 79 (336)
T 3g2f_A 9 SLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-------RQNF--INEKNIYRVPLMEHDNIARFIVGDERV 79 (336)
T ss_dssp CCCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG-------HHHH--HHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred CcChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc-------hhhH--HHHHHHHHHHhccCcchhhheeccccc
Confidence 4467899999999999999999999999999999865321 1111 012344445568999999999876542
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---------Ceeec
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---------HIMHR 948 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~---------gIIHr 948 (1137)
.. ......++||||+++|+|.+++.. ...++..+..|+.||+.||+|||++ ||+||
T Consensus 80 ~~---------~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~ 144 (336)
T 3g2f_A 80 TA---------DGRMEYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHR 144 (336)
T ss_dssp CT---------TSCEEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECS
T ss_pred cc---------CCCceEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeec
Confidence 21 012267999999999999999976 2468999999999999999999999 99999
Q ss_pred cCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccC---CCCCCch
Q 001152 949 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK---PNLYGLE 1025 (1137)
Q Consensus 949 DLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---~~~~s~k 1025 (1137)
||||+|||++.+ +.+||+|||+++........... ..........||+.|+|||++.+... ...++.+
T Consensus 145 Dikp~Nill~~~-------~~~kL~DFG~a~~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~ 215 (336)
T 3g2f_A 145 DLNSRNVLVKND-------GTCVISDFGLSMRLTGNRLVRPG--EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQ 215 (336)
T ss_dssp SCSGGGEEECTT-------SCEEECCCTTCEECSSSSCC-----------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHH
T ss_pred ccccceEEEcCC-------CcEEEeeccceeecccccccCcc--ccccccccCCCccceeCchhhcCCcccccccccccc
Confidence 999999999977 78999999999765432211000 00011224469999999999875211 0235679
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCH-HH--HHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCch---hhhhhHHH
Q 001152 1026 VDIWSYGCLLLELLTLQVPYMGLSE-LE--IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE---AELETLSF 1099 (1137)
Q Consensus 1026 sDVWSLGviL~ELLTG~~Pf~~~~~-~e--l~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 1099 (1137)
+|||||||++|||++|..||..... .+ .......+..+......... .........+. ....++++
T Consensus 216 ~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T 3g2f_A 216 VDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLV--------SREKQRPKFPEAWKENSLAVRS 287 (336)
T ss_dssp HHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHH--------TTSCCCCCCCTTCCCCSHHHHH
T ss_pred cchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhh--------cccccCCCCCcccccccchHHH
Confidence 9999999999999999777643211 00 00000111111111000000 00000000000 01246778
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1100 LVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1100 L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
+.+|+.+||+.||.+|||+.||++.+....
T Consensus 288 l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 288 LKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 999999999999999999999999887754
No 211
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.2e-38 Score=358.04 Aligned_cols=283 Identities=19% Similarity=0.222 Sum_probs=212.4
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHH---------HHHhHHhHHHHHHHHHhCCCCCccee
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADE---------IRNFEYSCLGEVRMLGALRHSCIVEM 870 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~---------~e~~~~~~lrEi~iL~~L~HpNIVkl 870 (1137)
.+.+|++.+.||+|+||.||+|.+.+..||+|+............ .......+.+|+.++++++||||+++
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 457899999999999999999999889999998754422111000 00000234889999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHH------HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 001152 871 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNY------IEKLSETGEKHVSVKLALFIAQDVAAALVELHS-K 943 (1137)
Q Consensus 871 lg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~------L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs-~ 943 (1137)
++++.+.+ ..++||||+++++|.++ +.. .....+++..++.|+.||+.||+|||+ +
T Consensus 109 ~~~~~~~~--------------~~~lv~e~~~~~~L~~~~~~~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 171 (348)
T 2pml_X 109 EGIITNYD--------------EVYIIYEYMENDSILKFDEYFFVLDK---NYTCFIPIQVIKCIIKSVLNSFSYIHNEK 171 (348)
T ss_dssp SEEEESSS--------------EEEEEEECCTTCBSSEESSSEESSCS---SSCCCCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEEeeCC--------------eEEEEEeccCCCcHHHHHHHhhhhhh---ccccCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 99998765 67999999999999998 432 224579999999999999999999999 9
Q ss_pred CeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCC
Q 001152 944 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG 1023 (1137)
Q Consensus 944 gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s 1023 (1137)
||+||||||+|||++.+ +.+||+|||.+........ ....||+.|+|||++.+. ..++
T Consensus 172 ~i~H~dl~p~Nil~~~~-------~~~kl~dfg~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~---~~~~ 229 (348)
T 2pml_X 172 NICHRDVKPSNILMDKN-------GRVKLSDFGESEYMVDKKI------------KGSRGTYEFMPPEFFSNE---SSYN 229 (348)
T ss_dssp CEECCCCCGGGEEECTT-------SCEEECCCTTCEECBTTEE------------CSSCSCGGGCCGGGGSSC---CCEE
T ss_pred CEeecCCChHhEEEcCC-------CcEEEeccccccccccccc------------cCCCCCcCccCchhhcCC---CCCC
Confidence 99999999999999887 7899999999876543211 134689999999998752 2444
Q ss_pred c-hhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001152 1024 L-EVDIWSYGCLLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1101 (1137)
Q Consensus 1024 ~-ksDVWSLGviL~ELLTG~~Pf~~~~~-~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1101 (1137)
. ++|||||||++|+|++|..||..... .++...+..+.... +..... .................++++.
T Consensus 230 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~ 300 (348)
T 2pml_X 230 GAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEY-PLDRNH--------FLYPLTNKKSTCSNNFLSNEDI 300 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCC-CCSSSS--------STTTTCC--------CCCHHHH
T ss_pred cchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCC-ccchhh--------hhccccccccccchhhcCHHHH
Confidence 5 99999999999999999999987665 66666665543221 100000 0000000000011124567799
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1102 DVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1102 dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
+|+.+||+.||.+|||++|+++|+|+...
T Consensus 301 ~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 301 DFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 99999999999999999999999999754
No 212
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.3e-37 Score=348.17 Aligned_cols=269 Identities=22% Similarity=0.321 Sum_probs=198.0
Q ss_pred ceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 804 LSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 804 y~l~~~LG~GsfG~Vy~a~~------~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
|++.+.||+|+||+||++.+ .+..||+|+.... ......+. +.+|+.++++++||||+++++++.+.
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD---AGPQHRSG----WKQEIDILRTLYHEHIIKYKGCCEDA 105 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc---cChHHHHH----HHHHHHHHHhCCCcchhhEEEEEecC
Confidence 49999999999999999876 3567889886432 12333333 48899999999999999999999864
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+. ...++||||+++++|.+++.. ..+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 106 ~~------------~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~ 167 (318)
T 3lxp_A 106 GA------------ASLQLVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL 167 (318)
T ss_dssp TT------------TEEEEEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CC------------ceEEEEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE
Confidence 31 167999999999999999865 349999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++|||||||++|+
T Consensus 168 ~~~-------~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 229 (318)
T 3lxp_A 168 DND-------RLVKIGDFGLAKAVPEGHEYY-------RVREDGDSPVFWYAPECLKE----YKFYYASDVWSFGVTLYE 229 (318)
T ss_dssp CTT-------CCEEECCGGGCEECCTTCSEE-------EC---CCCCGGGCCHHHHHH----CEEEHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEECCcccccccccccccc-------ccccCCCCCceeeChHHhcC----CCCCcHHHHHHHHHHHHH
Confidence 877 789999999997654422110 01123458889999999976 457799999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchh-HHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTD-ELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
|++|..||...... ... ........... .+... ... .... .....+++++.+|+.+||+.||.+||
T Consensus 230 ll~g~~p~~~~~~~-~~~-~~~~~~~~~~~~~~~~~-------~~~-~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rp 296 (318)
T 3lxp_A 230 LLTHCDSSQSPPTK-FLE-LIGIAQGQMTVLRLTEL-------LER-GERL---PRPDKCPAEVYHLMKNCWETEASFRP 296 (318)
T ss_dssp HHTTTCGGGSHHHH-HHH-HHCSCCHHHHHHHHHHH-------HHT-TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHhCCCcccccchh-hhh-hhcccccchhHHHHHHH-------Hhc-ccCC---CCCccccHHHHHHHHHHcCCCcccCc
Confidence 99999999753211 111 00000000000 00000 000 0000 00114566799999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001152 1117 TAGDLYEMFVAR 1128 (1137)
Q Consensus 1117 Sa~EVL~~L~~~ 1128 (1137)
|++|+++.+...
T Consensus 297 s~~ell~~L~~l 308 (318)
T 3lxp_A 297 TFENLIPILKTV 308 (318)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999988765
No 213
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.1e-37 Score=342.70 Aligned_cols=263 Identities=22% Similarity=0.321 Sum_probs=198.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC---Cc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~---~~--~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
..+|++.+.||+|+||+||+|++. +. .||+|+....... .....+ ++.+|+.++++++||||+++++++.
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~ 91 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMD----DFIREVNAMHSLDHRNLIRLYGVVL 91 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHH----HHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHH----HHHHHHHHHHhCCCCCcccEEEEEc
Confidence 457999999999999999999863 22 3677764322111 112223 3488999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
... .++||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 92 ~~~---------------~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Ni 152 (291)
T 1u46_A 92 TPP---------------MKMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL 152 (291)
T ss_dssp SSS---------------CEEEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred cCC---------------ceeeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheE
Confidence 543 48999999999999999763 24589999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||+++
T Consensus 153 li~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 214 (291)
T 1u46_A 153 LLATR-------DLVKIGDFGLMRALPQNDDHY-------VMQEHRKVPFAWCAPESLKT----RTFSHASDTWMFGVTL 214 (291)
T ss_dssp EEEET-------TEEEECCCTTCEECCC-CCEE-------EC-----CCGGGCCHHHHHH----CEEEHHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEccccccccccccccch-------hhhccCCCCceeeCchhhcC----CCCCchhhHHHHHHHH
Confidence 99987 789999999987654322110 01123357889999999876 4578999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1036 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1036 ~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|+|++ |..||.+....++...+......... ...+++++.+++.+||+.||.+
T Consensus 215 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~~p~~ 268 (291)
T 1u46_A 215 WEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--------------------------PEDCPQDIYNVMVQCWAHKPED 268 (291)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--------------------------CTTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhCCCCCcccCCHHHHHHHHHccCCCCCC--------------------------CcCcCHHHHHHHHHHccCCccc
Confidence 99999 99999988888777776543321100 0134556999999999999999
Q ss_pred CCCHHHHHHHHHhhcCC
Q 001152 1115 RPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~s 1131 (1137)
|||+.++++++......
T Consensus 269 Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 269 RPTFVALRDFLLEAQPT 285 (291)
T ss_dssp SCCHHHHHHHHHHHC--
T ss_pred CcCHHHHHHHHHHhCcc
Confidence 99999999999877543
No 214
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.4e-36 Score=345.60 Aligned_cols=267 Identities=27% Similarity=0.362 Sum_probs=203.5
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHh--CCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~--L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|++.+..||+|++... ..+. +.+|++++.. ++||||+++++++.....
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------~~~~----~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERS----WFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG-------GHHH----HHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch-------hHHH----HHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 57999999999999999999999999999986322 1222 3678888887 789999999999886531
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCeeeccCC
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDIK 951 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLH--------s~gIIHrDLK 951 (1137)
.....++||||+++|+|.+++.. ..+++..++.++.||+.||+||| ++||+|||||
T Consensus 111 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 174 (342)
T 1b6c_B 111 ----------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174 (342)
T ss_dssp ----------SCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCS
T ss_pred ----------ccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCC
Confidence 11257999999999999999976 35899999999999999999999 8999999999
Q ss_pred CCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCC--CCCchhhHH
Q 001152 952 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDIW 1029 (1137)
Q Consensus 952 P~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksDVW 1029 (1137)
|+|||++.+ +.+||+|||++........... .......||+.|+|||++.+..... .++.++|||
T Consensus 175 p~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~ 241 (342)
T 1b6c_B 175 SKNILVKKN-------GTCCIADLGLAVRHDSATDTID------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY 241 (342)
T ss_dssp GGGEEECTT-------SCEEECCCTTCEEEETTTTEEE------ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHH
T ss_pred HHHEEECCC-------CCEEEEECCCceeccccccccc------cccccCCcCcccCCHhhhcccccccccccCCcccHH
Confidence 999999887 7899999999976544321100 0112346999999999987522111 233789999
Q ss_pred HHHHHHHHHHhC----------CCCCCCC-----CHHHHHHHHHc-CCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001152 1030 SYGCLLLELLTL----------QVPYMGL-----SELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1093 (1137)
Q Consensus 1030 SLGviL~ELLTG----------~~Pf~~~-----~~~el~~~I~~-g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1137)
||||++|||++| ..||... ....+...+.. ...+.++..+ ..
T Consensus 242 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 299 (342)
T 1b6c_B 242 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QS 299 (342)
T ss_dssp HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG----------------------GT
T ss_pred HHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccc----------------------cc
Confidence 999999999999 7888653 22333333322 1222222111 11
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1094 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1094 ~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
..+++.+.+|+.+||+.||++|||+.||++++.....
T Consensus 300 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 300 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp SHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 2566789999999999999999999999999987643
No 215
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.3e-37 Score=354.71 Aligned_cols=281 Identities=20% Similarity=0.260 Sum_probs=205.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCC-----cceeee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSC-----IVEMYG 872 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpN-----IVkllg 872 (1137)
..+|++.+.||+|+||+||+|.+. +..||+|+.... ....+ .+.+|+.+++.++ |++ |+++++
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~----~~~~e~~~l~~l~~~~~~~~~~iv~~~~ 123 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLN----QAQIEVRLLELMNKHDTEMKYYIVHLKR 123 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHH----HHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHH----HHHHHHHHHHHHHhcccccceeEEEeee
Confidence 578999999999999999999985 467888875421 22222 2367888888886 554 899999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--hCCeeeccC
Q 001152 873 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--SKHIMHRDI 950 (1137)
Q Consensus 873 ~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLH--s~gIIHrDL 950 (1137)
++...+ +.++||||++ ++|.+++... ....+++..+..|+.||+.||.||| +.||+||||
T Consensus 124 ~~~~~~--------------~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDl 185 (382)
T 2vx3_A 124 HFMFRN--------------HLCLVFEMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDL 185 (382)
T ss_dssp EEEETT--------------EEEEEEECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCC
T ss_pred eeccCC--------------ceEEEEecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCC
Confidence 988765 6799999996 6999999862 2245899999999999999999999 469999999
Q ss_pred CCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHH
Q 001152 951 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1030 (1137)
Q Consensus 951 KP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWS 1030 (1137)
||+|||++.+. .+.+||+|||+++...... ....||+.|+|||++.+ ..++.++||||
T Consensus 186 kp~NIll~~~~-----~~~~kL~DFG~a~~~~~~~-------------~~~~~t~~y~aPE~~~~----~~~~~~~DiwS 243 (382)
T 2vx3_A 186 KPENILLCNPK-----RSAIKIVDFGSSCQLGQRI-------------YQYIQSRFYRSPEVLLG----MPYDLAIDMWS 243 (382)
T ss_dssp SGGGEEESSTT-----SCCEEECCCTTCEETTCCC-------------CSSCSCGGGCCHHHHTT----CCCCTHHHHHH
T ss_pred CcccEEEecCC-----CCcEEEEeccCceeccccc-------------ccccCCccccChHHHcC----CCCCcHHHHHH
Confidence 99999996431 1679999999997654311 13468999999999976 46889999999
Q ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcc-------cccccc-----cccCCCCCCc--------
Q 001152 1031 YGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGS-------CHEHEV-----AQSGSGFEKP-------- 1090 (1137)
Q Consensus 1031 LGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~-------~~~~~~-----~~~~~~~~~~-------- 1090 (1137)
|||++|||++|+.||.+.+..+....+...........+...+. .....+ ......+..+
T Consensus 244 lG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 323 (382)
T 2vx3_A 244 LGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 323 (382)
T ss_dssp HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHH
Confidence 99999999999999999888777766644322111111110000 000000 0000000000
Q ss_pred ----------------hhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1091 ----------------EAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1091 ----------------~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
.......+++.+||.+||+.||++|||++|+++|+|+...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 324 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred hhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 0011234579999999999999999999999999999764
No 216
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.6e-36 Score=345.94 Aligned_cols=286 Identities=17% Similarity=0.173 Sum_probs=204.7
Q ss_pred CCCceEeeeecccCceEEEEEEECC---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCC------cceee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC------IVEMY 871 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~---~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpN------IVkll 871 (1137)
..+|++.+.||+|+||+||+|.+.. ..||+|+.... ....+ .+.+|+.+++.++|++ ++.++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~~~~ 88 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYRE----AARLEINVLKKIKEKDKENKFLCVLMS 88 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHH----HHHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchh----HHHHHHHHHHHHhhcCCCCceeEEEee
Confidence 3689999999999999999999843 56888885321 22222 3478999999987665 88999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 001152 872 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 951 (1137)
Q Consensus 872 g~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLK 951 (1137)
+++.... +.++||||+ +++|.+++.. .....+++..++.|+.||+.||+|||++||+|||||
T Consensus 89 ~~~~~~~--------------~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlk 150 (355)
T 2eu9_A 89 DWFNFHG--------------HMCIAFELL-GKNTFEFLKE---NNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLK 150 (355)
T ss_dssp EEEEETT--------------EEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred eeeeeCC--------------eEEEEEecc-CCChHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 9888665 679999999 5788887765 223469999999999999999999999999999999
Q ss_pred CCCeEeccccc------------cCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCC
Q 001152 952 SENILIDLERK------------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1019 (1137)
Q Consensus 952 P~NILld~~~~------------~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1019 (1137)
|+|||++.... .....+.+||+|||+++...... ....||+.|+|||++.+
T Consensus 151 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-------------~~~~gt~~y~aPE~~~~---- 213 (355)
T 2eu9_A 151 PENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH-------------TTIVATRHYRPPEVILE---- 213 (355)
T ss_dssp GGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC-------------CSSCSCGGGCCHHHHTT----
T ss_pred HHHEEEecccccccccccccccccccCCCcEEEeecCccccccccc-------------cCCcCCCcccCCeeeec----
Confidence 99999943210 00123789999999987533211 13469999999999975
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccc----ccc-----------ccccC
Q 001152 1020 NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH----EHE-----------VAQSG 1084 (1137)
Q Consensus 1020 ~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~----~~~-----------~~~~~ 1084 (1137)
..++.++|||||||++|||++|..||......+....+.....+.....+....... ... .....
T Consensus 214 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (355)
T 2eu9_A 214 LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 293 (355)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC
T ss_pred CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccC
Confidence 568899999999999999999999999877766555553322221111111100000 000 00000
Q ss_pred CCC-CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1085 SGF-EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1085 ~~~-~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
... .........++++.+|+.+||+.||.+|||++|+++|+|+...
T Consensus 294 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 294 KPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp CCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred CcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence 000 0000012446689999999999999999999999999999853
No 217
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.3e-37 Score=341.62 Aligned_cols=278 Identities=20% Similarity=0.284 Sum_probs=196.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|++. +..+|+|+.... ....+. +.+|+.++++++||||+++++++.+...
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 76 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLST----ILSEVMLLASLNHQYVVRYYAAWLERRN 76 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHH----HHHHHHHHTTCCCTTBCCEEEEEEECCC
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHH----HHHHHHHHHhcCchHHHHHHHHHHhhcc
Confidence 46899999999999999999974 577888875322 223333 4889999999999999999999876431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
+...- .........++||||+++++|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 77 ~~~~~-~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~ 151 (303)
T 1zy4_A 77 FVKPM-TAVKKKSTLFIQMEYCENGTLYDLIHS----ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE 151 (303)
T ss_dssp CCC-------CEEEEEEEEECCCSCBHHHHHHH----SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred hhhhh-cccccCCceEEEEecCCCCCHHHhhhc----cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcC
Confidence 10000 001123378999999999999999976 2346889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccc----cCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA----HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~----~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
+ +.+||+|||++............. ...........||+.|+|||++.+ ...++.++|||||||++
T Consensus 152 ~-------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il 221 (303)
T 1zy4_A 152 S-------RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG---TGHYNEKIDMYSLGIIF 221 (303)
T ss_dssp T-------SCEEECCCCCCSCTTC-------------------------CTTSCHHHHTS---CSCCCTHHHHHHHHHHH
T ss_pred C-------CCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccC---CCCCcchhhHHHHHHHH
Confidence 7 789999999987654321100000 000011224468999999999874 23678999999999999
Q ss_pred HHHHhCCCCCCCC-CHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1036 LELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~-~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|+|++ ||... ...+....+..... .++.. .....++.+.+++.+||+.||.+
T Consensus 222 ~~l~~---p~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------~~~~~~~~~~~li~~~l~~dp~~ 274 (303)
T 1zy4_A 222 FEMIY---PFSTGMERVNILKKLRSVSI-EFPPD-----------------------FDDNKMKVEKKIIRLLIDHDPNK 274 (303)
T ss_dssp HHHHS---CCSSHHHHHHHHHHHHSTTC-CCCTT-----------------------CCTTTSHHHHHHHHHHTCSSGGG
T ss_pred HHHHh---ccCCchhHHHHHHhcccccc-ccCcc-----------------------ccccchHHHHHHHHHHHhcCccc
Confidence 99998 56432 22333334433221 11110 01134556899999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001152 1115 RPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~ 1130 (1137)
|||++++++|+|+...
T Consensus 275 Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 275 RPGARTLLNSGWLPVK 290 (303)
T ss_dssp SCCHHHHHHSSCSCCC
T ss_pred CcCHHHHhCCCCcCCC
Confidence 9999999999999643
No 218
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=350.87 Aligned_cols=269 Identities=21% Similarity=0.290 Sum_probs=206.5
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 798 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 798 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
.....+|++.+.||+|+||.||+|++.+ .+|+|+...... .....+.+ .+|+.++++++||||+++++++.+.
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~--~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERD--NEDQLKAF----KREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSC--CCCCCCCC----CTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCC--CHHHHHHH----HHHHHHHhcCCCCCEeEEEEEEecC
Confidence 3456789999999999999999999875 588887543322 12222223 6789999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
. ..++||||+++++|.+++.. ....+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 102 ~--------------~~~iv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~ 163 (319)
T 2y4i_B 102 P--------------HLAIITSLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163 (319)
T ss_dssp S--------------CEEEECBCCCSEEHHHHTTS----SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE
T ss_pred C--------------ceEEEeecccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE
Confidence 5 56999999999999999865 23468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc-----CCCCCCchhhHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-----KPNLYGLEVDIWSYG 1032 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~~~~~s~ksDVWSLG 1032 (1137)
+ + +.+||+|||++.......... .........||+.|+|||++.+.. ....++.++||||||
T Consensus 164 ~-~-------~~~~l~Dfg~~~~~~~~~~~~-----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG 230 (319)
T 2y4i_B 164 D-N-------GKVVITDFGLFSISGVLQAGR-----REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG 230 (319)
T ss_dssp C----------CCEECCCSCCC---------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHH
T ss_pred e-C-------CCEEEeecCCccccccccccc-----cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHH
Confidence 7 3 579999999986543211110 011122345889999999987521 124578999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1033 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1033 viL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
|++|+|++|..||.......+...+..+..+..... ..++++.+++.+||+.||
T Consensus 231 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~l~~li~~~l~~~p 284 (319)
T 2y4i_B 231 TIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI--------------------------GMGKEISDILLFCWAFEQ 284 (319)
T ss_dssp HHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCS--------------------------SCCTTHHHHHHHHHCSST
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcC--------------------------CCCHHHHHHHHHHhcCCh
Confidence 999999999999998888877777766554332210 123348999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001152 1113 TERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~ 1130 (1137)
.+|||+.++++.+.....
T Consensus 285 ~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 285 EERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp TTSCCHHHHHHHHTTC--
T ss_pred hhCcCHHHHHHHHHHHHH
Confidence 999999999999887643
No 219
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.2e-37 Score=356.80 Aligned_cols=289 Identities=20% Similarity=0.230 Sum_probs=208.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||+||+|++. +..||+|+........ ..+ .+.+|+.++++++||||+++++++.....
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~----~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 81 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVD----VQMREFEVLKKLNHKNIVKLFAIEEETTT 81 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---CHH----HHHHHHHHHHHCCCTTBCCEEEEEECTTT
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc---hHH----HHHHHHHHHHhcCCCCCCeEEEeeccCCC
Confidence 46999999999999999999986 5779999864322111 122 23789999999999999999999876441
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
...++||||+++|+|.++++... ....+++..++.|+.||+.||+|||++||+||||||+|||+..
T Consensus 82 ------------~~~~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 147 (396)
T 4eut_A 82 ------------RHKVLIMEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147 (396)
T ss_dssp ------------CCEEEEECCCTTEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE
T ss_pred ------------CeeEEEEecCCCCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEee
Confidence 15699999999999999997532 1234999999999999999999999999999999999999832
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccC----CCCCCchhhHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK----PNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~----~~~~s~ksDVWSLGviL 1035 (1137)
+ ..+.+.+||+|||+++........ ....||+.|+|||++.+... ...++.++|||||||++
T Consensus 148 ~---~~~~~~~kL~DFG~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il 213 (396)
T 4eut_A 148 G---EDGQSVYKLTDFGAARELEDDEQF-----------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213 (396)
T ss_dssp C---TTSCEEEEECCGGGCEECCCGGGS-----------SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHH
T ss_pred c---CCCceeEEEecCCCceEccCCCcc-----------ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHH
Confidence 2 112267999999999765432211 13469999999999864110 02467899999999999
Q ss_pred HHHHhCCCCCCC----CCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001152 1036 LELLTLQVPYMG----LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1111 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~----~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~D 1111 (1137)
|||++|+.||.. ....++...+..+..+............. ..+.. .. ..........++.+.+++.+||+.|
T Consensus 214 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~-~~-~~~~~l~~~~~~~l~~ll~~~L~~d 290 (396)
T 4eut_A 214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP-IDWSG-DM-PVSCSLSRGLQVLLTPVLANILEAD 290 (396)
T ss_dssp HHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCC-EEEES-SC-CTTCSSCHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCC-cccCc-cC-CcccccchHHHhhchHHHHHhhccC
Confidence 999999999964 23344555555554332221111100000 00000 00 0011122367788999999999999
Q ss_pred CCCCCCHHHHHHHHHhh
Q 001152 1112 PTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1112 P~~RPSa~EVL~~L~~~ 1128 (1137)
|++||+++|+++++..+
T Consensus 291 P~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 291 QEKCWGFDQFFAETSDI 307 (396)
T ss_dssp TTTSCCHHHHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHH
Confidence 99999999999988765
No 220
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.8e-37 Score=351.93 Aligned_cols=283 Identities=18% Similarity=0.192 Sum_probs=205.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|.+.+.||+|+||.||+|.+. +..||+|+... ........+ ++.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 97 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR--PFQSEIFAK----RAYRELLLLKHMQHENVIGLLDVFTPASS 97 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESS--TTSSHHHHH----HHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecc--cccchHHHH----HHHHHHHHHHhcCCCCcccHhheEecccc
Confidence 57999999999999999999985 56788887532 222222223 34889999999999999999999876542
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
. ......++||||+. ++|.+++. ..+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 98 ~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~ 161 (353)
T 3coi_A 98 L--------RNFYDFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE 161 (353)
T ss_dssp G--------GGCCCCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT
T ss_pred c--------ccceeEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECC
Confidence 1 11224699999997 78887763 24999999999999999999999999999999999999997
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||++....... ....+|+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 162 ~-------~~~kl~Dfg~~~~~~~~~-------------~~~~~t~~y~aPE~~~~---~~~~~~~~Di~slG~il~el~ 218 (353)
T 3coi_A 162 D-------CELKILDFGLARHADAEM-------------TGYVVTRWYRAPEVILS---WMHYNQTVDIWSVGCIMAEML 218 (353)
T ss_dssp T-------CCEEECSTTCTTC---------------------CCSBCCSCHHHHSC---CSCCCTTHHHHHHHHHHHHHH
T ss_pred C-------CcEEEeecccccCCCCCc-------------cccccCcCcCCHHHHhC---cCCCCchhhHHHHHHHHHHHH
Confidence 7 789999999987543211 13468999999999874 246789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
+|..||.+.+..+....+........................+ ..............++++.+|+.+||+.||.+||
T Consensus 219 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp 298 (353)
T 3coi_A 219 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL 298 (353)
T ss_dssp HSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSC
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCC
Confidence 9999999888777666553321111111110000000000000 0000001111125567899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001152 1117 TAGDLYEMFVART 1129 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~ 1129 (1137)
|++|+++|+|+..
T Consensus 299 t~~e~l~hp~f~~ 311 (353)
T 3coi_A 299 TAAQALTHPFFEP 311 (353)
T ss_dssp CHHHHHTSGGGTT
T ss_pred CHHHHhcCcchhh
Confidence 9999999999974
No 221
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.2e-37 Score=373.22 Aligned_cols=256 Identities=25% Similarity=0.361 Sum_probs=209.1
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
..+|++.++||+|+||.||+|.+.+ ..||||+.+... .. .+. +.+|+.+|++++|||||++++++.+ .
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~---~~~----~~~E~~~l~~l~hpniv~~~~~~~~-~- 334 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MS---PEA----FLQEAQVMKKLRHEKLVQLYAVVSE-E- 334 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SC---HHH----HHHHHHHHHHCCCTTBCCEEEEECS-S-
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CC---HHH----HHHHHHHHHhCCCCCEeeEEEEEee-c-
Confidence 4579999999999999999999975 568888754322 11 223 3889999999999999999999865 2
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..+|||||+++|+|.++++... ...+++..++.|+.||+.||+|||++||+||||||+|||++.
T Consensus 335 -------------~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~ 398 (535)
T 2h8h_A 335 -------------PIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 398 (535)
T ss_dssp -------------SCEEEECCCTTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred -------------cceEeeehhcCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcC
Confidence 3599999999999999997521 235899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+|||+++........ ......++..|+|||++.+ ..++.++|||||||++|||+
T Consensus 399 ~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwSlGv~l~el~ 458 (535)
T 2h8h_A 399 N-------LVCKVADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELT 458 (535)
T ss_dssp G-------GCEEECCTTSTTTCCCHHHH---------TTCSTTSCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHT
T ss_pred C-------CcEEEcccccceecCCCcee---------cccCCcCcccccCHHHhcc----CCCCchhhHHHHHHHHHHHH
Confidence 7 78999999999765432111 0112346789999999876 46889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1040 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1040 T-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
+ |..||.+....++...+..+.+...+. .+++.+.+||.+||+.||++|||+
T Consensus 459 t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~RPt~ 511 (535)
T 2h8h_A 459 TKGRVPYPGMVNREVLDQVERGYRMPCPP---------------------------ECPESLHDLMCQCWRKEPEERPTF 511 (535)
T ss_dssp TTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhHCcCH
Confidence 9 999999988888888776654332221 345569999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001152 1119 GDLYEMFVARTS 1130 (1137)
Q Consensus 1119 ~EVL~~L~~~~~ 1130 (1137)
++|++.|.....
T Consensus 512 ~~l~~~L~~~~~ 523 (535)
T 2h8h_A 512 EYLQAFLEDYFT 523 (535)
T ss_dssp HHHHHHHHTSSC
T ss_pred HHHHHHHHHHhh
Confidence 999999987644
No 222
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.8e-37 Score=377.82 Aligned_cols=249 Identities=21% Similarity=0.334 Sum_probs=199.7
Q ss_pred eeecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCCCCCC
Q 001152 808 DEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 883 (1137)
Q Consensus 808 ~~LG~GsfG~Vy~a~~~----~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~~~~~ 883 (1137)
++||+|+||.||+|.+. +..||||+.+... ......+ .+.+|+.+|++++|||||++++++...
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~------ 442 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKD----ELLAEANVMQQLDNPYIVRMIGICEAE------ 442 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG--GCGGGHH----HHHHHHHHHHHCCCTTBCCEEEEEESS------
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc--CCHHHHH----HHHHHHHHHHhCCCCCEeeEEEEEecC------
Confidence 48999999999999762 3568888754332 1122223 348999999999999999999998643
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecccccc
Q 001152 884 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 963 (1137)
Q Consensus 884 ~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~~~~ 963 (1137)
..++||||+++|+|.++++. ...+++..++.|+.||+.||+|||++||+||||||+|||++.+
T Consensus 443 ---------~~~lv~E~~~~g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~--- 505 (635)
T 4fl3_A 443 ---------SWMLVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ--- 505 (635)
T ss_dssp ---------SEEEEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---
T ss_pred ---------CEEEEEEccCCCCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCC---
Confidence 35899999999999999976 3469999999999999999999999999999999999999987
Q ss_pred CCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CC
Q 001152 964 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQ 1042 (1137)
Q Consensus 964 ~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-G~ 1042 (1137)
+.+||+|||+++......... .......+|+.|+|||++.+ ..++.++|||||||++|||++ |+
T Consensus 506 ----~~~kL~DFGla~~~~~~~~~~-------~~~~~~~~t~~y~APE~~~~----~~~~~~sDvwSlGv~l~ellt~G~ 570 (635)
T 4fl3_A 506 ----HYAKISDFGLSKALRADENYY-------KAQTHGKWPVKWYAPECINY----YKFSSKSDVWSFGVLMWEAFSYGQ 570 (635)
T ss_dssp ----TEEEECCTTHHHHTTC--------------------CGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred ----CCEEEEEcCCccccccCcccc-------ccccCCCCceeeeChhhhcC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 789999999997654322110 11112346789999999976 568999999999999999998 99
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001152 1043 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1122 (1137)
Q Consensus 1043 ~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL 1122 (1137)
.||.+....++...+..+..+..+. .+++++.+||.+||+.||++||++++|+
T Consensus 571 ~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dP~~RPs~~~l~ 623 (635)
T 4fl3_A 571 KPYRGMKGSEVTAMLEKGERMGCPA---------------------------GCPREMYDLMNLCWTYDVENRPGFAAVE 623 (635)
T ss_dssp CSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 9999999888888887766543332 3455699999999999999999999999
Q ss_pred HHHHh
Q 001152 1123 EMFVA 1127 (1137)
Q Consensus 1123 ~~L~~ 1127 (1137)
+.+..
T Consensus 624 ~~L~~ 628 (635)
T 4fl3_A 624 LRLRN 628 (635)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 223
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-38 Score=356.07 Aligned_cols=268 Identities=26% Similarity=0.360 Sum_probs=185.8
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHh--CCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~--L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|++.+..||||++... .... +.+|.+++.. ++||||+++++++.....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-------~~~~----~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 71 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERS----WFREAEIYQTVMLRHENILGFIAADNKDNG 71 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-T-------THHH----HHHHHHHHTSTTCCC-CBCCEEEEEEEECS
T ss_pred ceeeehhhccCCCCeEEEEEEEcCcceEEEEeccc-------chhh----HHHHHHHHHHHhccCcceeeeeeecccCCC
Confidence 36889999999999999999999999999985311 1122 2568888877 789999999999876531
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCeeeccCC
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDIK 951 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLH--------s~gIIHrDLK 951 (1137)
.....++||||+++|+|.++++. ..+++..++.++.|++.||+||| ++||+|||||
T Consensus 72 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 135 (303)
T 3gxj_A 72 ----------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135 (303)
T ss_dssp ----------SSEEEEEEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCC
T ss_pred ----------ccceeEEEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCC
Confidence 12267999999999999999975 35888899999999999999999 9999999999
Q ss_pred CCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCC--CCCchhhHH
Q 001152 952 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDIW 1029 (1137)
Q Consensus 952 P~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksDVW 1029 (1137)
|+|||++.+ +.+||+|||+++.......... .......||+.|+|||++.+..... .++.++|||
T Consensus 136 p~Nil~~~~-------~~~kl~DFg~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 202 (303)
T 3gxj_A 136 SKNILVKKN-------GTCCIADLGLAVRHDSATDTID------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY 202 (303)
T ss_dssp GGGC-CCTT-------CCC-BCCCCC-CCEETTTTEES------CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred HHHeEECCC-------CCEEEeecCcceeccCCCcccc------cccCCCCcCccccCHhhhcCcccccccccCcchhHH
Confidence 999999977 7899999999976544322110 1112346999999999987532111 334789999
Q ss_pred HHHHHHHHHHhC----------CCCCCCCCH-----HHHHHHHH-cCCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001152 1030 SYGCLLLELLTL----------QVPYMGLSE-----LEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1093 (1137)
Q Consensus 1030 SLGviL~ELLTG----------~~Pf~~~~~-----~el~~~I~-~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1093 (1137)
||||++|||++| ..||..... .++...+. ....+.++..+ ..
T Consensus 203 slG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 260 (303)
T 3gxj_A 203 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QS 260 (303)
T ss_dssp C-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGG----------------------GS
T ss_pred HHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccc----------------------cc
Confidence 999999999999 666643211 11111111 11111111110 11
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001152 1094 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1094 ~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~s 1131 (1137)
...++.+.+|+.+||+.||.+|||++||++.+......
T Consensus 261 ~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 261 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred hhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 25667899999999999999999999999999877543
No 224
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=374.80 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=200.3
Q ss_pred CCceEee-eecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 802 PSLSSCD-EAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 802 ~~y~l~~-~LG~GsfG~Vy~a~~~----~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
.++.+.+ .||+|+||.||+|.+. +..||||+.+.. .. ....+. +.+|+.+|++++|||||++++++..
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~--~~-~~~~~~----~~~E~~il~~l~hpniv~l~~~~~~ 407 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TE-KADTEE----MMREAQIMHQLDNPYIVRLIGVCQA 407 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC--CS-STTHHH----HHHHHHHHTTCCCTTBCCEEEEEES
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC--CC-hHHHHH----HHHHHHHHHhCCCCCEeeEEEEecc
Confidence 3455555 8999999999999873 245777774322 11 222333 3889999999999999999999875
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeE
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 956 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NIL 956 (1137)
+ ..++||||+++|+|.+++.. ....+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 408 ~---------------~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NIL 468 (613)
T 2ozo_A 408 E---------------ALMLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVL 468 (613)
T ss_dssp S---------------SEEEEEECCTTCBHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred C---------------CeEEEEEeCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEE
Confidence 3 46999999999999999864 2346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1036 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1036 (1137)
++.+ +.+||+|||+++......... .......+|+.|+|||++.+ ..++.++|||||||++|
T Consensus 469 l~~~-------~~vkL~DFGla~~~~~~~~~~-------~~~~~~~~~~~y~APE~~~~----~~~~~~sDvwSlGv~l~ 530 (613)
T 2ozo_A 469 LVNR-------HYAKISDFGLSKALGADDSYY-------TARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGVTMW 530 (613)
T ss_dssp EEET-------TEEEECCCSTTTTCC---------------------CCTTSCHHHHHH----CCCCHHHHHHHHHHHHH
T ss_pred EcCC-------CcEEEeeccCcccccCCCcee-------eeccCCCCccceeCHhhhcC----CCCCcHHHHHHHHHHHH
Confidence 9987 789999999997654322110 01112245689999999976 56899999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1037 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1037 ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
||++ |..||.+....++...+..+.....+. .+++++.+||.+||+.||++|
T Consensus 531 ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dP~~R 583 (613)
T 2ozo_A 531 EALSYGQKPYKKMKGPEVMAFIEQGKRMECPP---------------------------ECPPELYALMSDCWIYKWEDR 583 (613)
T ss_dssp HHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSTTTS
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------cCCHHHHHHHHHHcCCChhHC
Confidence 9998 999999988888888887766443322 345569999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001152 1116 PTAGDLYEMFVA 1127 (1137)
Q Consensus 1116 PSa~EVL~~L~~ 1127 (1137)
|++.+|++.|..
T Consensus 584 Ps~~~l~~~L~~ 595 (613)
T 2ozo_A 584 PDFLTVEQRMRA 595 (613)
T ss_dssp CCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 999999776554
No 225
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.6e-36 Score=349.33 Aligned_cols=287 Identities=19% Similarity=0.242 Sum_probs=203.2
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-----------CCC
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----------HSC 866 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-----------HpN 866 (1137)
...+|++.+.||+|+||+||+|++. +..||+|+.... ....+. +.+|+.+++++. |||
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~----~~~e~~~l~~l~~~~~~~~~~~~~~~ 87 (373)
T 1q8y_A 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEA----AEDEIKLLQRVNDADNTKEDSMGANH 87 (373)
T ss_dssp TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHH----HHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhh----hhHHHHHHHHhhcccccchhccccch
Confidence 3468999999999999999999974 577888875421 222223 377999988886 899
Q ss_pred cceeeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-Ce
Q 001152 867 IVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HI 945 (1137)
Q Consensus 867 IVkllg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~-gI 945 (1137)
|+++++++.... ......++||||+ +++|.+++... ....+++..+..|+.||+.||+|||++ ||
T Consensus 88 i~~~~~~~~~~~----------~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~~i 153 (373)
T 1q8y_A 88 ILKLLDHFNHKG----------PNGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHRRCGI 153 (373)
T ss_dssp BCCCCEEEEEEE----------TTEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhhccC----------CCCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 999999987643 1123679999999 89999999863 234599999999999999999999998 99
Q ss_pred eeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCch
Q 001152 946 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE 1025 (1137)
Q Consensus 946 IHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~k 1025 (1137)
+||||||+|||++.++. ....+.+||+|||++....... ....||+.|+|||++.+ ..++.+
T Consensus 154 vH~Dikp~NIll~~~~~-~~~~~~~kl~Dfg~a~~~~~~~-------------~~~~~t~~y~aPE~~~~----~~~~~~ 215 (373)
T 1q8y_A 154 IHTDIKPENVLMEIVDS-PENLIQIKIADLGNACWYDEHY-------------TNSIQTREYRSPEVLLG----APWGCG 215 (373)
T ss_dssp ECSCCSGGGEEEEEEET-TTTEEEEEECCCTTCEETTBCC-------------CSCCSCGGGCCHHHHHT----CCCCTH
T ss_pred EecCCChHHeEEeccCC-CcCcceEEEcccccccccCCCC-------------CCCCCCccccCcHHHhC----CCCCch
Confidence 99999999999965421 1122579999999997654321 12368999999999976 468899
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHc--CCCCCchhHHhhhcccc-----cccccccCCCCCC---
Q 001152 1026 VDIWSYGCLLLELLTLQVPYMGLSE------LEIHDLIQM--GKRPRLTDELEALGSCH-----EHEVAQSGSGFEK--- 1089 (1137)
Q Consensus 1026 sDVWSLGviL~ELLTG~~Pf~~~~~------~el~~~I~~--g~~p~l~~~l~~~~~~~-----~~~~~~~~~~~~~--- 1089 (1137)
+|||||||++|||++|..||..... .+....+.. +..| ..+....... .............
T Consensus 216 ~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (373)
T 1q8y_A 216 ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP---SYLLRNGKYTRTFFNSRGLLRNISKLKFWPL 292 (373)
T ss_dssp HHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCC---HHHHHHCTTHHHHBCC--CBSSCCCCCBCCH
T ss_pred HhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCC---HHHHhccchhhhhcCCcchhcccccccccch
Confidence 9999999999999999999986432 222222211 1111 1110000000 0000000000000
Q ss_pred -------chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001152 1090 -------PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1090 -------~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~~ 1130 (1137)
.......++++.+||.+||+.||.+|||++||++|+|+...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340 (373)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred hhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence 00113567889999999999999999999999999999864
No 226
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.8e-36 Score=335.41 Aligned_cols=263 Identities=17% Similarity=0.160 Sum_probs=194.7
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
-.+|++.+.||+|+||.||+|++ .+..||+|+....... + ++.+|+.+++.++|++++..+.++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~----~~~~e~~~l~~l~~~~~i~~~~~~~~~~ 77 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------P----QLHIESKIYKMMQGGVGIPTIRWCGAEG 77 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------C----CHHHHHHHHHHHTTSTTCCCEEEEEEET
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc------h----HHHHHHHHHHHhcCCCCCCeeeeecCCC
Confidence 36799999999999999999996 4577888875433211 1 2377999999999988887777664432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe-
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI- 957 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl- 957 (1137)
...++||||+ +++|.+++... ...+++..+..|+.||+.||+|||++||+||||||+|||+
T Consensus 78 -------------~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~ 139 (296)
T 4hgt_A 78 -------------DYNVMVMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG 139 (296)
T ss_dssp -------------TEEEEEEECC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred -------------CceEEEEEcc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeee
Confidence 1679999999 89999999752 3469999999999999999999999999999999999999
Q ss_pred --ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 958 --DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 958 --d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
+.+ +.+||+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++
T Consensus 140 ~~~~~-------~~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 205 (296)
T 4hgt_A 140 LGKKG-------NLVYIIDFGLAKKYRDARTHQH---IPYRENKNLTGTARYASINTHLG----IEQSRRDDLESLGYVL 205 (296)
T ss_dssp CGGGT-------TCEEECCCTTCEECBCTTTCCB---CCCCCSCCCCSCGGGCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred ccCCC-------CeEEEecCccceeccCcccCcc---CCCCcccccCCCccccchHHhcC----CCCCchhHHHHHHHHH
Confidence 444 7899999999986654322110 01112234579999999999876 4688999999999999
Q ss_pred HHHHhCCCCCCCCCHH---HHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1036 LELLTLQVPYMGLSEL---EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~---el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
|+|++|+.||.+.... +....+.....+... +......++++.+++.+||+.||
T Consensus 206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p 262 (296)
T 4hgt_A 206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----------------------EVLCKGYPSEFATYLNFCRSLRF 262 (296)
T ss_dssp HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHTSCT
T ss_pred HHHhcCCCCCcccchhhhhhhhhhhhcccccchh-----------------------hhhhccCCHHHHHHHHHHHhcCC
Confidence 9999999999764321 111111110000000 00011345679999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001152 1113 TERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~ 1128 (1137)
++|||+++|++.+...
T Consensus 263 ~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 263 DDKPDYSYLRQLFRNL 278 (296)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 9999999999987664
No 227
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=350.90 Aligned_cols=281 Identities=13% Similarity=0.081 Sum_probs=197.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHH----hHHhHHHHHHHHHhCCCCCcceee
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRN----FEYSCLGEVRMLGALRHSCIVEMY 871 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAVKi~~l~~~~~~~~~~e~----~~~~~lrEi~iL~~L~HpNIVkll 871 (1137)
-.+|++.+.||+|+||.||+|.+. +..+|+|+....... ...+.+. ....+.+|+.+++.++||||++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~ 114 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP-LFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY 114 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CH-HHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcc-hHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence 367999999999999999999984 366888875433210 0111111 112357889999999999999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 001152 872 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 951 (1137)
Q Consensus 872 g~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLK 951 (1137)
+++.... ......++||||+ +++|.+++... ..+++..++.|+.||+.||+|||++||+|||||
T Consensus 115 ~~~~~~~----------~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk 178 (345)
T 2v62_A 115 GSGLTEF----------KGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIK 178 (345)
T ss_dssp EEEEEES----------SSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred ccccccc----------CCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcC
Confidence 9987621 0112689999999 89999998652 369999999999999999999999999999999
Q ss_pred CCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001152 952 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1031 (1137)
Q Consensus 952 P~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1031 (1137)
|+|||++.+.. +.+||+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||
T Consensus 179 p~NIll~~~~~-----~~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~sl 246 (345)
T 2v62_A 179 AANLLLGYKNP-----DQVYLADYGLSYRYCPNGNHKQ---YQENPRKGHNGTIEFTSLDAHKG----VALSRRSDVEIL 246 (345)
T ss_dssp GGGEEEESSST-----TSEEECCCTTCEESSGGGCCCC---CCCCGGGCSCSCTTTCCHHHHHT----CCCCHHHHHHHH
T ss_pred HHHEEEccCCC-----CcEEEEeCCCceeccccccccc---chhccccccCCCccccCHHHhcC----CCCCchhhHHHH
Confidence 99999987621 3899999999976643221100 00011124579999999999876 468999999999
Q ss_pred HHHHHHHHhCCCCCCC--CCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001152 1032 GCLLLELLTLQVPYMG--LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1109 (1137)
Q Consensus 1032 GviL~ELLTG~~Pf~~--~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~ 1109 (1137)
||++|||++|+.||.+ .......... ....+.++..+... . .....++++.+++.+||+
T Consensus 247 G~il~ell~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~-------~~~~~~~~l~~li~~~l~ 307 (345)
T 2v62_A 247 GYCMLRWLCGKLPWEQNLKDPVAVQTAK-TNLLDELPQSVLKW-----------A-------PSGSSCCEIAQFLVCAHS 307 (345)
T ss_dssp HHHHHHHHHSSCTTGGGTTCHHHHHHHH-HHHHHTTTHHHHHH-----------S-------CTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCccccccccHHHHHHH-HhhcccccHHHHhh-----------c-------cccccHHHHHHHHHHHhh
Confidence 9999999999999964 2222222211 11111111111110 0 001345679999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhc
Q 001152 1110 ENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1110 ~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
.||++|||+++|++.+....
T Consensus 308 ~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 308 LAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp CCTTCCCCHHHHHHHHCTTC
T ss_pred cCcccCCCHHHHHHHHhccC
Confidence 99999999999999998754
No 228
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.5e-36 Score=335.00 Aligned_cols=266 Identities=17% Similarity=0.169 Sum_probs=197.7
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
-.+|++.+.||+|+||.||+|++ .+..||+|+....... + ++.+|+.+++.++|++++..+.++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~----~~~~e~~~l~~l~~~~~i~~~~~~~~~~ 77 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------P----QLHIESKIYKMMQGGVGIPTIRWCGAEG 77 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC------C----HHHHHHHHHHHHTTSTTCCCEEEEEEET
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch------h----HHHHHHHHHHHhhcCCCCCccccccCCC
Confidence 36799999999999999999997 4678899975433211 1 2377999999999988887776664432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
...++||||+ +++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 78 -------------~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~ 139 (296)
T 3uzp_A 78 -------------DYNVMVMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG 139 (296)
T ss_dssp -------------TEEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred -------------CceEEEEEec-CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEe
Confidence 1679999999 89999999752 24699999999999999999999999999999999999995
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+. ..+.+||+|||++........... ..........||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 140 ~~~----~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 208 (296)
T 3uzp_A 140 LGK----KGNLVYIIDFGLAKKYRDARTHQH---IPYRENKNLTGTARYASINTHLG----IEQSRRDDLESLGYVLMYF 208 (296)
T ss_dssp CGG----GTTCEEECCCTTCEECBCTTTCCB---CCCCCSCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHHH
T ss_pred cCC----CCCeEEEeeCCCcccccccccccc---cccccccccccccccCChhhhcC----CCCCcchhhHHHHHHHHHH
Confidence 211 116899999999986654322110 01111234579999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCCH---HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001152 1039 LTLQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1115 (1137)
Q Consensus 1039 LTG~~Pf~~~~~---~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~R 1115 (1137)
++|+.||.+... .+....+.......... .....+++++.+++.+||+.||.+|
T Consensus 209 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~~R 265 (296)
T 3uzp_A 209 NLGSLPWQGLKAATKRQKYERISEKKMSTPIE-----------------------VLCKGYPSEFATYLNFCRSLRFDDK 265 (296)
T ss_dssp HHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH-----------------------HHTTTSCHHHHHHHHHHHTSCTTCC
T ss_pred HhCCCCCCCcCchhhhhhhhhhcccccCCchH-----------------------HHHhhCCHHHHHHHHHHHhcCcCcC
Confidence 999999976322 11222221110000000 0011445679999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001152 1116 PTAGDLYEMFVAR 1128 (1137)
Q Consensus 1116 PSa~EVL~~L~~~ 1128 (1137)
||+++|++.+...
T Consensus 266 ps~~~l~~~l~~~ 278 (296)
T 3uzp_A 266 PDYSYLRQLFRNL 278 (296)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9999999887764
No 229
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.7e-37 Score=348.41 Aligned_cols=267 Identities=23% Similarity=0.333 Sum_probs=183.5
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHHhCCCCCcceeeeeEec
Q 001152 800 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 800 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~-iL~~L~HpNIVkllg~~~~ 876 (1137)
...+|++.+.||+|+||.||+|.+. +..||+|+..... ....... +.+|+. +++.++||||+++++++..
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~----~~~e~~~~~~~~~h~niv~~~~~~~~ 92 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV---DEKEQKQ----LLMDLDVVMRSSDCPYIVQFYGALFR 92 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC---CHHHHHH----HHHHHHHHHSSCCCTTBCCEEEEEEC
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc---CchHHHH----HHHHHHHHHHcCCCCcEeeeeeEEEe
Confidence 4578999999999999999999986 5778888764321 1222222 255655 6777899999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCe
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI 955 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~-gIIHrDLKP~NI 955 (1137)
.+ ..++||||++ ++|.+++..........+++..+..++.|++.||.|||++ ||+||||||+||
T Consensus 93 ~~--------------~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NI 157 (327)
T 3aln_A 93 EG--------------DCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNI 157 (327)
T ss_dssp SS--------------EEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGE
T ss_pred CC--------------ceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHE
Confidence 65 6799999997 6999888754444456799999999999999999999998 999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||++........ .....||+.|+|||++........++.++|||||||++
T Consensus 158 ll~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 219 (327)
T 3aln_A 158 LLDRS-------GNIKLCDFGISGQLVDSIA-----------KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITL 219 (327)
T ss_dssp EEETT-------TEEEECCCSSSCC-----------------------------------------CCSHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEccCCCceecccccc-----------cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHH
Confidence 99877 7899999999876543211 11236899999999985322235688999999999999
Q ss_pred HHHHhCCCCCCCCCHH-HHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1036 LELLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~-el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|+|++|..||...... +....+..+..+.+.. ......++.+.+|+.+||+.||.+
T Consensus 220 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~~ 276 (327)
T 3aln_A 220 YELATGRFPYPKWNSVFDQLTQVVKGDPPQLSN-----------------------SEEREFSPSFINFVNLCLTKDESK 276 (327)
T ss_dssp HHHHHSCCCSSCC-------CCCCCSCCCCCCC-----------------------CSSCCCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCC-----------------------cccccCCHHHHHHHHHHhhCChhh
Confidence 9999999999764321 1111111111111100 000134567999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001152 1115 RPTAGDLYEMFVART 1129 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~ 1129 (1137)
|||+.||++|+|+..
T Consensus 277 Rps~~ell~hp~~~~ 291 (327)
T 3aln_A 277 RPKYKELLKHPFILM 291 (327)
T ss_dssp SCCHHHHTTSHHHHH
T ss_pred CcCHHHHHhChHHHH
Confidence 999999999999964
No 230
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=340.28 Aligned_cols=278 Identities=18% Similarity=0.172 Sum_probs=201.7
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
-.+|++.+.||+|+||.||+|++ .+..||+|+.... .....+. +.+|+.+++.++||||+++++++....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 99 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREE----AQREADMHRLFNHPNILRLVAYCLRER 99 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHH----HHHHHHHHHTCCCTTBCCCCEEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHH----HHHHHHHHhhcCCCCeeeEEEEEEecc
Confidence 35799999999999999999997 4577899975432 1333333 488999999999999999999987422
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
. .....++||||+++++|.+++...... ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 100 ~----------~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~ 168 (317)
T 2buj_A 100 G----------AKHEAWLLLPFFKRGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG 168 (317)
T ss_dssp T----------TEEEEEEEEECCTTCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred C----------CCceeEEEEEeCCCCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc
Confidence 0 122679999999999999999864333 35799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ +.+||+|||++.............. .........||+.|+|||++.+.. ...++.++|||||||++|+|
T Consensus 169 ~~-------~~~kl~dfg~~~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~el 239 (317)
T 2buj_A 169 DE-------GQPVLMDLGSMNQACIHVEGSRQAL-TLQDWAAQRCTISYRAPELFSVQS-HCVIDERTDVWSLGCVLYAM 239 (317)
T ss_dssp TT-------SCEEECCCSSCEESCEEEESHHHHH-HHHHHHHHHSCGGGCCGGGSSCCS-EEEECTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEecCcchhcccccccccccc-cccccccccCCcccCCHhHhccCC-CcCCCchhhHHHHHHHHHHH
Confidence 77 7899999998865432110000000 000001234789999999986421 12367899999999999999
Q ss_pred HhCCCCCCCCCH--HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001152 1039 LTLQVPYMGLSE--LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1116 (1137)
Q Consensus 1039 LTG~~Pf~~~~~--~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RP 1116 (1137)
++|..||..... ..+...+........ ....++++.+++.+||+.||.+||
T Consensus 240 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~dp~~Rp 292 (317)
T 2buj_A 240 MFGEGPYDMVFQKGDSVALAVQNQLSIPQ---------------------------SPRHSSALWQLLNSMMTVDPHQRP 292 (317)
T ss_dssp HHSSCTTHHHHHTTSCHHHHHHCC--CCC---------------------------CTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HhCCCChhhhhcccchhhHHhhccCCCCc---------------------------cccCCHHHHHHHHHHhhcChhhCC
Confidence 999999953100 011111111110000 013456699999999999999999
Q ss_pred CHHHHHHHHHhhcCCCC
Q 001152 1117 TAGDLYEMFVARTSSSI 1133 (1137)
Q Consensus 1117 Sa~EVL~~L~~~~~ss~ 1133 (1137)
|++++++++.....+..
T Consensus 293 s~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 293 HIPLLLSQLEALQPPAP 309 (317)
T ss_dssp CHHHHHHHHHHTCCCCC
T ss_pred CHHHHHHHhhhcCCCCC
Confidence 99999999998876544
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.9e-36 Score=339.83 Aligned_cols=261 Identities=21% Similarity=0.296 Sum_probs=196.3
Q ss_pred CCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC--CCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~--HpNIVkllg~~~~~~ 878 (1137)
.+|++.+.||+|+||.||+|.+. +..+|+|+..... ......+. +.+|+.++++++ ||||+++++++....
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~----~~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 101 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDS----YRNEIAYLNKLQQHSDKIIRLYDYEITDQ 101 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS--CCHHHHHH----HHHHHHHHHHHGGGCTTBCCEEEEEECSS
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc--ccccchHH----HHHHHHHHHhccccCCceEEEEEEeecCC
Confidence 46999999999999999999985 4678999865432 22333333 488999999997 599999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||| +.+++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+|||++
T Consensus 102 --------------~~~lv~e-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~ 161 (313)
T 3cek_A 102 --------------YIYMVME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 161 (313)
T ss_dssp --------------EEEEEEC-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred --------------EEEEEEe-cCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE
Confidence 6799999 557999999986 34689999999999999999999999999999999999996
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc-------CCCCCCchhhHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSY 1031 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVWSL 1031 (1137)
. +.+||+|||++......... .......||+.|+|||++.+.. ....++.++|||||
T Consensus 162 ~--------~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~sl 225 (313)
T 3cek_A 162 D--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225 (313)
T ss_dssp T--------TEEEECCCSSSCC----------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHH
T ss_pred C--------CeEEEeeccccccccCcccc--------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHH
Confidence 3 57999999999765432211 1112346899999999986421 11367899999999
Q ss_pred HHHHHHHHhCCCCCCCCCH-HHHHHHHHcCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001152 1032 GCLLLELLTLQVPYMGLSE-LEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1109 (1137)
Q Consensus 1032 GviL~ELLTG~~Pf~~~~~-~el~~~I~~g~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~ 1109 (1137)
||++|+|++|..||..... ......+.... ...++ ...++++.+++.+||+
T Consensus 226 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~ 278 (313)
T 3cek_A 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---------------------------DIPEKDLQDVLKCCLK 278 (313)
T ss_dssp HHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC---------------------------CCSCHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCc---------------------------ccchHHHHHHHHHHcc
Confidence 9999999999999976432 22222222211 10100 0224468999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcCC
Q 001152 1110 ENPTERPTAGDLYEMFVARTSS 1131 (1137)
Q Consensus 1110 ~DP~~RPSa~EVL~~L~~~~~s 1131 (1137)
.||.+|||++|+++|+|+....
T Consensus 279 ~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 279 RDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp SSTTTSCCHHHHHTSHHHHCC-
T ss_pred CCcccCcCHHHHhcCccccCCC
Confidence 9999999999999999998653
No 232
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=340.27 Aligned_cols=263 Identities=23% Similarity=0.355 Sum_probs=188.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 799 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 799 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
..+.+|++.+.||+|+||.||+|.+. +..||+|+..... . ...... .+..+..+++.++||||+++++++.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~-~~~~~~---~~~~~~~~~~~~~h~~i~~~~~~~~~ 95 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG--N-KEENKR---ILMDLDVVLKSHDCPYIVQCFGTFIT 95 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS--C-HHHHHH---HHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc--c-chHHHH---HHHHHHHHHHhcCCCceeeEEEEEec
Confidence 35678999999999999999999985 5788999864332 1 222222 12445567888899999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCe
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI 955 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~-gIIHrDLKP~NI 955 (1137)
.+ ..++||||+ ++.+..+.... ...+++..+..++.||+.||+|||++ ||+||||||+||
T Consensus 96 ~~--------------~~~lv~e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Ni 156 (318)
T 2dyl_A 96 NT--------------DVFIAMELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI 156 (318)
T ss_dssp SS--------------EEEEEECCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGE
T ss_pred CC--------------cEEEEEecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHE
Confidence 65 679999999 56666655431 24689999999999999999999995 999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc-CCCCCCchhhHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGvi 1034 (1137)
|++.+ +.+||+|||++........ .....||+.|+|||++.... ....++.++|||||||+
T Consensus 157 l~~~~-------~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 218 (318)
T 2dyl_A 157 LLDER-------GQIKLCDFGISGRLVDDKA-----------KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218 (318)
T ss_dssp EECTT-------SCEEECCCTTC-------------------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred EECCC-------CCEEEEECCCchhccCCcc-----------ccccCCCccccChhhcccccccccCCccccchhhHHHH
Confidence 99877 7899999999875543211 11346899999999985311 12467899999999999
Q ss_pred HHHHHhCCCCCCC-CCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLTLQVPYMG-LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~-~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|+|++|..||.. ....+....+.....+.++.. ...++++.+++.+||+.||.
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~l~~li~~~l~~dp~ 273 (318)
T 2dyl_A 219 LVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGH-------------------------MGFSGDFQSFVKDCLTKDHR 273 (318)
T ss_dssp HHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSS-------------------------SCCCHHHHHHHHHHTCSCTT
T ss_pred HHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCcc-------------------------CCCCHHHHHHHHHHccCChh
Confidence 9999999999986 344555555554443322210 02445699999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001152 1114 ERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~~ 1129 (1137)
+|||++|+++|+|+..
T Consensus 274 ~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 274 KRPKYNKLLEHSFIKR 289 (318)
T ss_dssp TSCCHHHHTTSHHHHH
T ss_pred HCcCHHHHhhCHHHHh
Confidence 9999999999999863
No 233
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=347.57 Aligned_cols=266 Identities=14% Similarity=0.114 Sum_probs=198.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC----------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcce-
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG----------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVE- 869 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~----------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVk- 869 (1137)
-.+|++.+.||+|+||.||+|++. +..+|+|+.... + .+.+|+.++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~----~~~~E~~~l~~l~h~niv~~ 107 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------G----RLFNEQNFFQRAAKPLQVNK 107 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------S----THHHHHHHHHHHCCHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------c----hHHHHHHHHHHhcccchhhh
Confidence 367999999999999999999985 467999985422 1 2377999999999999998
Q ss_pred --------------eeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHH
Q 001152 870 --------------MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAA 935 (1137)
Q Consensus 870 --------------llg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~ 935 (1137)
+++++...+ ...++||||+ +++|.+++... ....+++..++.|+.||+.
T Consensus 108 ~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~ 170 (352)
T 2jii_A 108 WKKLYSTPLLAIPTCMGFGVHQD-------------KYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLD 170 (352)
T ss_dssp HHHHTTCTTCSCCCCCEEEEETT-------------TEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHH
T ss_pred hhhhccCCccCccchhhccccCC-------------cEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHH
Confidence 455554321 2679999999 89999999862 1246999999999999999
Q ss_pred HHHHHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcc
Q 001152 936 ALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA 1015 (1137)
Q Consensus 936 gL~yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 1015 (1137)
||+|||++||+||||||+|||++.+.. ..+||+|||+++........... .........||+.|+|||++.+
T Consensus 171 ~L~~LH~~~ivH~Dikp~NIl~~~~~~-----~~~kl~Dfg~a~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~ 242 (352)
T 2jii_A 171 ALEFLHENEYVHGNVTAENIFVDPEDQ-----SQVTLAGYGFAFRYCPSGKHVAY---VEGSRSPHEGDLEFISMDLHKG 242 (352)
T ss_dssp HHHHHHHTTCBCSCCCGGGEEEETTEE-----EEEEECCGGGCBCSSGGGCCCCC---CTTSSCTTCSCTTTCCHHHHTT
T ss_pred HHHHHHhCCccCCCCCHHHEEEcCCCC-----ceEEEecCcceeeccCCCccccc---cccccccccCCccccCHHHHcc
Confidence 999999999999999999999997721 27999999999766543211100 0011224479999999999875
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHc--CCCCCchhHHhhhcccccccccccCCCCCCch
Q 001152 1016 MHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGL--SELEIHDLIQM--GKRPRLTDELEALGSCHEHEVAQSGSGFEKPE 1091 (1137)
Q Consensus 1016 ~~~~~~~s~ksDVWSLGviL~ELLTG~~Pf~~~--~~~el~~~I~~--g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 1091 (1137)
..++.++|||||||++|+|++|+.||... ....+...... ...+.+.... .
T Consensus 243 ----~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~------ 297 (352)
T 2jii_A 243 ----CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPC---------------G------ 297 (352)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTT---------------S------
T ss_pred ----CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhc---------------c------
Confidence 46889999999999999999999999764 33333332211 1111110000 0
Q ss_pred hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1092 AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1092 ~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
.....++++.+|+.+||+.||.+|||+++|++.+....
T Consensus 298 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 298 HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 00133567999999999999999999999999987653
No 234
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=342.09 Aligned_cols=273 Identities=21% Similarity=0.279 Sum_probs=183.4
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpNIVkllg~~~~~~ 878 (1137)
.+|++.++||+|+||.||+|++ .+..||+|+.... .....+. +.+|+.+++++. ||||+++++++....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~----~~~e~~~l~~l~~h~~iv~~~~~~~~~~ 99 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRA----IIQEVCFMKKLSGHPNIVQFCSAASIGK 99 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHH----HHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHH----HHHHHHHHHHhccCCChhhccccccccc
Confidence 3799999999999999999998 4578899975322 1233333 488999999996 999999999986432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeE
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL 956 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~g--IIHrDLKP~NIL 956 (1137)
.. ........++||||+. |+|.+++..... ...+++..++.|+.||+.||+|||++| |+||||||+|||
T Consensus 100 ~~------~~~~~~~~~lv~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl 170 (337)
T 3ll6_A 100 EE------SDTGQAEFLLLTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170 (337)
T ss_dssp TT------STTSSEEEEEEEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCE
T ss_pred cc------cccCCceEEEEEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEE
Confidence 11 0012236899999996 899999876432 346999999999999999999999999 999999999999
Q ss_pred eccccccCCCCCeEEEeecCcccccccccccccccc--CCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 957 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH--RGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 957 ld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~--~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
++.+ +.+||+|||+++............. ..........||+.|+|||++... ....++.++|||||||+
T Consensus 171 ~~~~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~~~Dv~slG~i 242 (337)
T 3ll6_A 171 LSNQ-------GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY-SNFPIGEKQDIWALGCI 242 (337)
T ss_dssp ECTT-------SCEEBCCCTTCBCCSSCC-------------------------------CC-TTSCSSHHHHHHHHHHH
T ss_pred ECCC-------CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcc-ccCCCChHHhHHHHHHH
Confidence 9987 7899999999976543221100000 000011134589999999998421 23567899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|+|++|+.||............ ...... ...++.+.+|+.+||+.||.+
T Consensus 243 l~el~~g~~p~~~~~~~~~~~~~---~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~ 292 (337)
T 3ll6_A 243 LYLLCFRQHPFEDGAKLRIVNGK---YSIPPH---------------------------DTQYTVFHSLIRAMLQVNPEE 292 (337)
T ss_dssp HHHHHHSSCCC---------------CCCCTT---------------------------CCSSGGGHHHHHHHSCSSGGG
T ss_pred HHHHHhCCCCCcchhHHHhhcCc---ccCCcc---------------------------cccchHHHHHHHHHccCChhh
Confidence 99999999999754332221111 000000 012233889999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001152 1115 RPTAGDLYEMFVART 1129 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~ 1129 (1137)
|||+.|++++++...
T Consensus 293 Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 293 RLSIAEVVHQLQEIA 307 (337)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHH
Confidence 999999999998764
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.1e-36 Score=348.08 Aligned_cols=265 Identities=24% Similarity=0.261 Sum_probs=176.6
Q ss_pred CCCceEee-eecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecC
Q 001152 801 FPSLSSCD-EAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 877 (1137)
Q Consensus 801 ~~~y~l~~-~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~ 877 (1137)
.++|++.+ .||+|+||+||+|.+. +..||+|+.... ....+ .....++.+.||||+++++++...
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~-------e~~~~~~~~~h~~i~~~~~~~~~~ 94 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQ-------EVDHHWQASGGPHIVCILDVYENM 94 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHH-------HHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHH-------HHHHHHHhcCCCChHHHHHHHhhc
Confidence 36799854 6999999999999986 578999985321 11111 122345677899999999998752
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
.. .....++||||+++|+|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 95 ~~----------~~~~~~lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll 161 (336)
T 3fhr_A 95 HH----------GKRCLLIIMECMEGGELFSRIQE---RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLY 161 (336)
T ss_dssp ET----------TEEEEEEEEECCTTEEHHHHHHT---C-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred cC----------CCceEEEEEeccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 20 11257999999999999999976 233469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.++ ..+.+||+|||++....... .....||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 162 ~~~~----~~~~~kl~Dfg~~~~~~~~~------------~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 221 (336)
T 3fhr_A 162 TSKE----KDAVLKLTDFGFAKETTQNA------------LQTPCYTPYYVAPEVLGP----EKYDKSCDMWSLGVIMYI 221 (336)
T ss_dssp SCSS----TTCCEEECCCTTCEEC--------------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred EecC----CCceEEEeccccceeccccc------------cccCCCCcCccChhhhCC----CCCCchhhHHHHHHHHHH
Confidence 8642 12669999999987544321 113468999999999864 467899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001152 1038 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1117 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPS 1117 (1137)
|++|..||................... .. .... ......++++.+|+.+||+.||.+|||
T Consensus 222 l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~----------------~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt 281 (336)
T 3fhr_A 222 LLCGFPPFYSNTGQAISPGMKRRIRLG---QY----------------GFPN-PEWSEVSEDAKQLIRLLLKTDPTERLT 281 (336)
T ss_dssp HHHSSCCC----------------------------------------CCCT-TTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHHCCCCCCCccchhhhhhHHHhhhcc---cc----------------ccCc-hhhccCCHHHHHHHHHHCCCChhHCcC
Confidence 999999997654433221111100000 00 0000 000145667999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001152 1118 AGDLYEMFVARTS 1130 (1137)
Q Consensus 1118 a~EVL~~L~~~~~ 1130 (1137)
++|+++|+|+...
T Consensus 282 ~~ell~hp~~~~~ 294 (336)
T 3fhr_A 282 ITQFMNHPWINQS 294 (336)
T ss_dssp HHHHHHSHHHHTG
T ss_pred HHHHhcCcccccc
Confidence 9999999999854
No 236
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=341.13 Aligned_cols=275 Identities=23% Similarity=0.312 Sum_probs=199.5
Q ss_pred CCCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~------~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
..+|++.+.||+|+||.||+|++ .+..||+|+.... .....+. +.+|+.++++++||||+++++++
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~ 111 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRD----FEREIEILKSLQHDNIVKYKGVC 111 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHH----HHHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHH----HHHHHHHHHhCCCCCeeeEEEEE
Confidence 45699999999999999999985 3567888875321 1233333 48899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
..... ...++||||+++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 112 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~N 175 (326)
T 2w1i_A 112 YSAGR------------RNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 175 (326)
T ss_dssp CC----------------CCEEEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred EecCC------------CceEEEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcce
Confidence 75431 1469999999999999999762 2469999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.+ +.+||+|||++.......... .......++..|+|||++.+ ..++.++|||||||+
T Consensus 176 Ili~~~-------~~~kL~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 237 (326)
T 2w1i_A 176 ILVENE-------NRVKIGDFGLTKVLPQDKEYY-------KVKEPGESPIFWYAPESLTE----SKFSVASDVWSFGVV 237 (326)
T ss_dssp EEEEET-------TEEEECCCTTCEECCSSCSEE-------ECSSCCSCCGGGCCHHHHHH----CEEEHHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEecCcchhhcccccccc-------ccccCCCCceeEECchhhcC----CCCCchhhHHHHHHH
Confidence 999987 789999999997654332110 00112357788999999876 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCch-hHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLT-DELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1113 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~ 1113 (1137)
+|+|++|..||.... .+....+......... ..+... +.. ..... ....+++++.+++.+||+.||.
T Consensus 238 l~el~tg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~---~~~~~~~~l~~li~~cl~~dP~ 305 (326)
T 2w1i_A 238 LYELFTYIEKSKSPP-AEFMRMIGNDKQGQMIVFHLIEL-------LKN-NGRLP---RPDGCPDEIYMIMTECWNNNVN 305 (326)
T ss_dssp HHHHHHTTCGGGSHH-HHHHHHHCTTCCTHHHHHHHHHH-------HHT-TCCCC---CCTTCCHHHHHHHHHHSCSSGG
T ss_pred HHHHHhcCCCCCCCH-HHHHHhhccccchhhhHHHHHHH-------hhc-CCCCC---CCCcccHHHHHHHHHHcCCChh
Confidence 999999999986421 1111111111000000 000000 000 00000 0114567799999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001152 1114 ERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1114 ~RPSa~EVL~~L~~~~ 1129 (1137)
+|||+.||++.+....
T Consensus 306 ~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 306 QRPSFRDLALRVDQIR 321 (326)
T ss_dssp GSCCHHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHHH
Confidence 9999999999887653
No 237
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.3e-36 Score=351.95 Aligned_cols=277 Identities=12% Similarity=0.048 Sum_probs=182.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC--CCCCcceee------
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMY------ 871 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L--~HpNIVkll------ 871 (1137)
..|++.+.||+|+||+||+|++. +..||+|+....... .....+ .+.+|+.+++.+ +||||++++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~----~~~~E~~~~~~l~~~hp~iv~~~~~~~~p 136 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELE----RLHEATFAAARLLGESPEEARDRRRLLLP 136 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHH----HHHHHHHHHHHHHC----------CBCCC
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHH----HHHHHHHHHHHhcccChhhhhhceeEEee
Confidence 45899999999999999999985 567899986543211 122222 346775444444 699988755
Q ss_pred -eeEecCCC---CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHH------HHHHHHHHHHHHHHH
Q 001152 872 -GHKISSKW---LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLA------LFIAQDVAAALVELH 941 (1137)
Q Consensus 872 -g~~~~~~~---~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i------~~I~~QIa~gL~yLH 941 (1137)
+++..... ....++.......+.|+||||++ ++|.+++.... ..+.+..+ ..|+.||+.||+|||
T Consensus 137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH 211 (371)
T 3q60_A 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQ 211 (371)
T ss_dssp CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 34333221 00000000111235899999998 99999998642 23444555 677899999999999
Q ss_pred hCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCC
Q 001152 942 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1021 (1137)
Q Consensus 942 s~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1021 (1137)
++||+||||||+|||++.+ +.+||+|||+++....... ...+|+.|+|||++.+ ....
T Consensus 212 ~~~ivHrDikp~NIll~~~-------~~~kL~DFG~a~~~~~~~~-------------~~~~t~~y~aPE~~~~--~~~~ 269 (371)
T 3q60_A 212 SKGLVHGHFTPDNLFIMPD-------GRLMLGDVSALWKVGTRGP-------------ASSVPVTYAPREFLNA--STAT 269 (371)
T ss_dssp HTTEEETTCSGGGEEECTT-------SCEEECCGGGEEETTCEEE-------------GGGSCGGGCCHHHHTC--SEEE
T ss_pred HCCCccCcCCHHHEEECCC-------CCEEEEecceeeecCCCcc-------------CccCCcCCcChhhccC--CCCC
Confidence 9999999999999999987 7899999999976543211 2347799999999964 1246
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001152 1022 YGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1101 (1137)
Q Consensus 1022 ~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1101 (1137)
++.++|||||||++|+|++|+.||.+....... .+. .. ............+. ....++.+.
T Consensus 270 ~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~---------~~~----~~-----~~~~~~~~~~~~~~-~~~~~~~~~ 330 (371)
T 3q60_A 270 FTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG---------SWK----RP-----SLRVPGTDSLAFGS-CTPLPDFVK 330 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT---------CCC----BC-----CTTSCCCCSCCCTT-SSCCCHHHH
T ss_pred cCccccHHHHHHHHHHHHhCCCCCCCcCccccc---------chh----hh-----hhhhccccccchhh-ccCCCHHHH
Confidence 789999999999999999999999764321000 000 00 00000000000110 114567799
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001152 1102 DVFRRCTEENPTERPTAGDLYEMFVART 1129 (1137)
Q Consensus 1102 dLl~~CL~~DP~~RPSa~EVL~~L~~~~ 1129 (1137)
+|+.+||+.||++|||+.|+++|+|+..
T Consensus 331 ~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 358 (371)
T 3q60_A 331 TLIGRFLNFDRRRRLLPLEAMETPEFLQ 358 (371)
T ss_dssp HHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred HHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence 9999999999999999999999999974
No 238
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=348.37 Aligned_cols=256 Identities=14% Similarity=0.151 Sum_probs=191.3
Q ss_pred CCceEeeeecccCceEEEEEE-------ECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC---CCCcceee
Q 001152 802 PSLSSCDEAGKSVSSSLFRCK-------FGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMY 871 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~-------~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~---HpNIVkll 871 (1137)
.+|++.+.||+|+||+||+|. ..+..||+|+.... .. .++ .+|+.+++.++ |+||++++
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~---~~~----~~e~~~~~~l~~~~~~~iv~~~ 133 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NP---WEF----YIGTQLMERLKPSMQHMFMKFY 133 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CH---HHH----HHHHHHHHHSCGGGGGGBCCEE
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----Ch---hHH----HHHHHHHHHhhhhhhhhhhhhh
Confidence 569999999999999999994 24578999985322 11 122 56778888887 99999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 001152 872 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 951 (1137)
Q Consensus 872 g~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLK 951 (1137)
+++...+ ..++||||+++|+|.+++..........+++..++.|+.||+.||+|||++||+|||||
T Consensus 134 ~~~~~~~--------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiK 199 (365)
T 3e7e_A 134 SAHLFQN--------------GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIK 199 (365)
T ss_dssp EEEECSS--------------CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCS
T ss_pred eeeecCC--------------CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCC
Confidence 9998765 56999999999999999987554445679999999999999999999999999999999
Q ss_pred CCCeEeccccc----cCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhh
Q 001152 952 SENILIDLERK----KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVD 1027 (1137)
Q Consensus 952 P~NILld~~~~----~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksD 1027 (1137)
|+|||++.+.. .....+.+||+|||+++......... ......||+.|+|||++.+ ..++.++|
T Consensus 200 p~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~----~~~~~~~D 267 (365)
T 3e7e_A 200 PDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT--------IFTAKCETSGFQCVEMLSN----KPWNYQID 267 (365)
T ss_dssp GGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTE--------EECCSSCTTSCCCHHHHTT----CCBSTHHH
T ss_pred HHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCc--------eeeeecCCCCCCChHHhcC----CCCCcccc
Confidence 99999987100 01113789999999997554221110 1123469999999999976 45899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001152 1028 IWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1107 (1137)
Q Consensus 1028 VWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~C 1107 (1137)
||||||++|||+||+.||....... .......... ...+.+.+++..|
T Consensus 268 iwslG~il~elltg~~pf~~~~~~~-------------------------~~~~~~~~~~-------~~~~~~~~~~~~~ 315 (365)
T 3e7e_A 268 YFGVAATVYCMLFGTYMKVKNEGGE-------------------------CKPEGLFRRL-------PHLDMWNEFFHVM 315 (365)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEETTE-------------------------EEECSCCTTC-------SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCCCCc-------------------------eeechhcccc-------CcHHHHHHHHHHH
Confidence 9999999999999999996421100 0000000000 2345688999999
Q ss_pred cccCCCCCC-CHHHHHHHHH
Q 001152 1108 TEENPTERP-TAGDLYEMFV 1126 (1137)
Q Consensus 1108 L~~DP~~RP-Sa~EVL~~L~ 1126 (1137)
|+.+|.+|+ ++.++.+.+.
T Consensus 316 l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 316 LNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp HCCCCTTCCCCHHHHHHHHH
T ss_pred cCCCCCCcchHHHHHHHHHH
Confidence 999999984 6666655443
No 239
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=339.00 Aligned_cols=253 Identities=21% Similarity=0.244 Sum_probs=191.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC----CCCCcceeeeeE
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL----RHSCIVEMYGHK 874 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L----~HpNIVkllg~~ 874 (1137)
..+|++.+.||+|+||.||+|++. +..||+|+....... ..........+.+|+.++.++ +||||+++++++
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVL--GWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC----------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccc--ccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 467999999999999999999984 567888875433211 111001112236799999998 899999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEee-ccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEY-VKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 953 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy-~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~ 953 (1137)
...+ ..++|||| +.+++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+
T Consensus 108 ~~~~--------------~~~~v~e~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~ 168 (312)
T 2iwi_A 108 ETQE--------------GFMLVLERPLPAQDLFDYITE-----KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDE 168 (312)
T ss_dssp -------------------CEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGG
T ss_pred ecCC--------------eEEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChh
Confidence 7655 45999999 788999999976 235899999999999999999999999999999999
Q ss_pred CeEec-cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001152 954 NILID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1032 (1137)
Q Consensus 954 NILld-~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1032 (1137)
||+++ .+ +.+||+|||++........ ....||+.|+|||++.+. ...+.++||||||
T Consensus 169 Nil~~~~~-------~~~kl~dfg~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG 226 (312)
T 2iwi_A 169 NILIDLRR-------GCAKLIDFGSGALLHDEPY------------TDFDGTRVYSPPEWISRH---QYHALPATVWSLG 226 (312)
T ss_dssp GEEEETTT-------TEEEECCCSSCEECCSSCB------------CCCCSCTTTSCHHHHHHS---CBCHHHHHHHHHH
T ss_pred hEEEeCCC-------CeEEEEEcchhhhcccCcc------------cccCCcccccCceeeecC---CCCCccchHHHHH
Confidence 99998 45 7899999999876543211 134589999999998752 2345699999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001152 1033 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1112 (1137)
Q Consensus 1033 viL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP 1112 (1137)
|++|+|++|+.||.... .+..... .++ ...++.+.+++.+||+.||
T Consensus 227 ~il~~l~~g~~pf~~~~------~~~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~p 272 (312)
T 2iwi_A 227 ILLYDMVCGDIPFERDQ------EILEAEL-HFP---------------------------AHVSPDCCALIRRCLAPKP 272 (312)
T ss_dssp HHHHHHHHSSCSCCSHH------HHHHTCC-CCC---------------------------TTSCHHHHHHHHHHTCSST
T ss_pred HHHHHHHHCCCCCCChH------HHhhhcc-CCc---------------------------ccCCHHHHHHHHHHccCCh
Confidence 99999999999997521 1111110 000 0334568999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001152 1113 TERPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1113 ~~RPSa~EVL~~L~~~~~ 1130 (1137)
++|||++|+++|+|+...
T Consensus 273 ~~Rps~~e~l~~~~~~~~ 290 (312)
T 2iwi_A 273 SSRPSLEEILLDPWMQTP 290 (312)
T ss_dssp TTSCCHHHHHHSTTTCC-
T ss_pred hhCcCHHHHhcChhhcCc
Confidence 999999999999999864
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.2e-36 Score=342.85 Aligned_cols=253 Identities=21% Similarity=0.226 Sum_probs=198.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC--CCCcceeeeeEec
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKIS 876 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~--HpNIVkllg~~~~ 876 (1137)
..+|++.+.||+|+||.||+|.+. +..||+|+.......... .. ....++.+|+.++++++ ||||+++++++..
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~-~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG-EL-PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEE-EC-TTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhh-hh-hhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 467999999999999999999984 577888886544322100 00 00112367999999996 5999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccC-CCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~g-gSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
.+ ..++||||+.+ ++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 120 ~~--------------~~~lv~e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NI 180 (320)
T 3a99_A 120 PD--------------SFVLILERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 180 (320)
T ss_dssp SS--------------EEEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred CC--------------cEEEEEEcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHE
Confidence 65 67999999976 899999976 24689999999999999999999999999999999999
Q ss_pred Eec-cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 956 LID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 956 Lld-~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
|++ .+ +.+||+|||++........ ....||+.|+|||++.+. ..++.++|||||||+
T Consensus 181 ll~~~~-------~~~kL~Dfg~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~---~~~~~~~Di~slG~i 238 (320)
T 3a99_A 181 LIDLNR-------GELKLIDFGSGALLKDTVY------------TDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGIL 238 (320)
T ss_dssp EEETTT-------TEEEECCCTTCEECCSSCB------------CCCCSCGGGSCHHHHHHS---CBCHHHHHHHHHHHH
T ss_pred EEeCCC-------CCEEEeeCccccccccccc------------cCCCCCccCCChHHhccC---CCCCccchHHhHHHH
Confidence 998 44 6899999999876543211 134689999999998752 334789999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|||++|+.||.... .+..... .++ ...++++.+|+.+||+.||.+
T Consensus 239 l~el~~g~~pf~~~~------~~~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~dp~~ 284 (320)
T 3a99_A 239 LYDMVCGDIPFEHDE------EIIRGQV-FFR---------------------------QRVSSECQHLIRWCLALRPSD 284 (320)
T ss_dssp HHHHHHSSCSCCSHH------HHHHCCC-CCS---------------------------SCCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHHCCCCCCChh------hhhcccc-ccc---------------------------ccCCHHHHHHHHHHccCChhh
Confidence 999999999997521 1111111 000 033456999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001152 1115 RPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~ 1130 (1137)
|||++||++|+|+...
T Consensus 285 Rps~~~ll~hp~~~~~ 300 (320)
T 3a99_A 285 RPTFEEIQNHPWMQDV 300 (320)
T ss_dssp SCCHHHHHTSGGGSSC
T ss_pred CcCHHHHhcCHhhcCc
Confidence 9999999999999754
No 241
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.2e-35 Score=369.43 Aligned_cols=255 Identities=22% Similarity=0.335 Sum_probs=203.1
Q ss_pred CCCceEeeeecccCceEEEEEEECC---c--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEe
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGS---A--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 875 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~---~--~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~ 875 (1137)
..+|++.+.||+|+||.||+|.+.. . .+|+|+ .+.. ......+ .+.+|+.++++++|||||++++++.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~--~~~~-~~~~~~~----~~~~E~~~l~~l~HpnIv~l~~~~~ 461 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKT--CKNC-TSDSVRE----KFLQEALTMRQFDHPHIVKLIGVIT 461 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEE--CSST-TCHHHHH----HHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEE--eccc-CCHHHHH----HHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 4679999999999999999999843 2 345554 3322 1222223 3489999999999999999999985
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
+. ..++||||+++|+|.++++. ....+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 462 ~~---------------~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NI 522 (656)
T 2j0j_A 462 EN---------------PVWIIMELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNV 522 (656)
T ss_dssp SS---------------SCEEEEECCTTCBHHHHHHH----TTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred cC---------------ceEEEEEcCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhE
Confidence 32 35999999999999999975 234689999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+ +.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|||||||++
T Consensus 523 Ll~~~-------~~vkL~DFG~a~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwSlG~il 582 (656)
T 2j0j_A 523 LVSSN-------DCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGVCM 582 (656)
T ss_dssp EEEET-------TEEEECCCCCCCSCCC-------------------CCGGGCCHHHHHH----CCCCHHHHHHHHHHHH
T ss_pred EEeCC-------CCEEEEecCCCeecCCCcce---------eccCCCCCcceeCHHHhcC----CCCCchhhHHHHHHHH
Confidence 99987 78999999999765432211 1112357789999999976 4688999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1036 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1036 ~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|||++ |..||.+....++...+..+..+..+. .+++.+.+++.+||+.||.+
T Consensus 583 ~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~~ 635 (656)
T 2j0j_A 583 WEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------------------NCPPTLYSLMTKCWAYDPSR 635 (656)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cccHHHHHHHHHHcCCChhH
Confidence 99997 999999988888888776655433221 34456999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001152 1115 RPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~ 1128 (1137)
|||+.||++.+...
T Consensus 636 RPs~~el~~~L~~i 649 (656)
T 2j0j_A 636 RPRFTELKAQLSTI 649 (656)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHH
Confidence 99999999988754
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=356.91 Aligned_cols=261 Identities=22% Similarity=0.305 Sum_probs=191.0
Q ss_pred CceEeeeecccCceE-EEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEecCCCC
Q 001152 803 SLSSCDEAGKSVSSS-LFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWL 880 (1137)
Q Consensus 803 ~y~l~~~LG~GsfG~-Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~~~~~ 880 (1137)
+|++.+.||+|+||+ ||++...++.||||+...+. ... +.+|+.+|+.+ +|||||++++++.+..
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~-------~~~----~~~E~~~l~~l~~HpnIv~l~~~~~~~~-- 91 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC-------FSF----ADREVQLLRESDEHPNVIRYFCTEKDRQ-- 91 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT-------EEE----CHHHHHHHHHSCCCTTBCCEEEEEEETT--
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH-------HHH----HHHHHHHHHhccCCCCcCeEEEEEecCC--
Confidence 589999999999998 55566678899999753221 111 26799999999 7999999999988765
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEeccc
Q 001152 881 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 960 (1137)
Q Consensus 881 ~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~ 960 (1137)
..|+||||++ |+|.+++... ...+.+..++.|+.||+.||+|||++||+||||||+|||++.+
T Consensus 92 ------------~~~lv~E~~~-g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~ 154 (432)
T 3p23_A 92 ------------FQYIAIELCA-ATLQEYVEQK----DFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP 154 (432)
T ss_dssp ------------EEEEEEECCS-EEHHHHHHSS----SCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCC
T ss_pred ------------EEEEEEECCC-CCHHHHHHhc----CCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecC
Confidence 6799999996 7999999752 2335555678999999999999999999999999999999654
Q ss_pred cccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001152 961 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1040 (1137)
Q Consensus 961 ~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1040 (1137)
+ ..+...+||+|||+++......... .......||+.|+|||++.+.. ...++.++|||||||++|||++
T Consensus 155 ~--~~~~~~~kL~DFG~a~~~~~~~~~~-------~~~~~~~gt~~y~APE~l~~~~-~~~~t~~~DiwSlG~il~ellt 224 (432)
T 3p23_A 155 N--AHGKIKAMISDFGLCKKLAVGRHSF-------SRRSGVPGTEGWIAPEMLSEDC-KENPTYTVDIFSAGCVFYYVIS 224 (432)
T ss_dssp B--TTTBCCEEECCTTEEECC-------------------CCSCTTSCCGGGTSCC----CCCTHHHHHHHHHHHHHHHT
T ss_pred C--CCCceeEEEecccceeeccCCCcce-------eeccccCCCcCccChhhhhccc-ccCCCcHHHHHHHHHHHHHHHc
Confidence 2 1233568999999997654322110 1112346999999999987421 2456789999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1041 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1041 -G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
|..||...........+......... .....+..+.+|+.+||+.||.+|||++
T Consensus 225 ~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ 279 (432)
T 3p23_A 225 EGSHPFGKSLQRQANILLGACSLDCLH-------------------------PEKHEDVIARELIEKMIAMDPQKRPSAK 279 (432)
T ss_dssp TSCBTTBSTTTHHHHHHTTCCCCTTSC-------------------------TTCHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCCCCcchhhHHHHHHHhccCCccccC-------------------------ccccccHHHHHHHHHHHhCCHhhCCCHH
Confidence 99999754443332221111110000 0113455689999999999999999999
Q ss_pred HHHHHHHhh
Q 001152 1120 DLYEMFVAR 1128 (1137)
Q Consensus 1120 EVL~~L~~~ 1128 (1137)
||++|+|+.
T Consensus 280 evl~hp~f~ 288 (432)
T 3p23_A 280 HVLKHPFFW 288 (432)
T ss_dssp HHHTSTTTC
T ss_pred HHHhCcccc
Confidence 999999985
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-35 Score=351.18 Aligned_cols=271 Identities=20% Similarity=0.259 Sum_probs=189.1
Q ss_pred CceEeeeecccCceEEEEE-EECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEecCCCC
Q 001152 803 SLSSCDEAGKSVSSSLFRC-KFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWL 880 (1137)
Q Consensus 803 ~y~l~~~LG~GsfG~Vy~a-~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~~~~~ 880 (1137)
.|.+.+.||+|+||+||.+ ...+..||||+...+. .+. +.+|+.+++++ +|||||++++++.+..
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-------~~~----~~~E~~~l~~l~~HpnIv~~~~~~~~~~-- 82 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-------CDI----ALMEIKLLTESDDHPNVIRYYCSETTDR-- 82 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-------HHH----HHHHHHHHHHHTTSTTBCCEEEEEECSS--
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-------HHH----HHHHHHHHHhccCCCCcCeEEEEEecCC--
Confidence 3567789999999999754 4467889999864321 122 37799999876 7999999999988665
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 881 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGE--KHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 881 ~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~--~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
..++||||++ |+|.+++........ ...++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 83 ------------~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~ 149 (434)
T 2rio_A 83 ------------FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 149 (434)
T ss_dssp ------------EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE
T ss_pred ------------eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEe
Confidence 6799999996 799999976221110 0113345678999999999999999999999999999997
Q ss_pred cccc------cCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc---CCCCCCchhhHH
Q 001152 959 LERK------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIW 1029 (1137)
Q Consensus 959 ~~~~------~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~s~ksDVW 1029 (1137)
.++. .....+.+||+|||+++.......... .......||+.|+|||++.+.. ....++.++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diw 223 (434)
T 2rio_A 150 TSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR------TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIF 223 (434)
T ss_dssp CCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHH
T ss_pred cCcccccccccCCCceEEEEcccccceecCCCCccce------eeecCCCCCCCccCHHHhccccccccccCcchhhhhH
Confidence 6420 012236899999999986654221100 0112346999999999987521 124688999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001152 1030 SYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1108 (1137)
Q Consensus 1030 SLGviL~ELLT-G~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL 1108 (1137)
||||++|||++ |..||......+ ..+..+....... . .......++++.+|+.+||
T Consensus 224 SlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~--~-------------------~~~~~~~~~~~~~li~~~L 280 (434)
T 2rio_A 224 SMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEM--K-------------------CLHDRSLIAEATDLISQMI 280 (434)
T ss_dssp HHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCC--T-------------------TCCCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccc--c-------------------ccccccchHHHHHHHHHHh
Confidence 99999999999 999997644332 2222222110000 0 0001245678999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhh
Q 001152 1109 EENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1109 ~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
+.||.+|||+.||++|+|+.
T Consensus 281 ~~dP~~Rps~~eil~hp~f~ 300 (434)
T 2rio_A 281 DHDPLKRPTAMKVLRHPLFW 300 (434)
T ss_dssp CSSGGGSCCHHHHHTSGGGS
T ss_pred hCChhhCCCHHHHHhCCccC
Confidence 99999999999999999985
No 244
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.1e-34 Score=348.07 Aligned_cols=265 Identities=19% Similarity=0.219 Sum_probs=196.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcc-eeeeeEecC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIV-EMYGHKISS 877 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIV-kllg~~~~~ 877 (1137)
-.+|++.++||+|+||.||+|++. +..||||+....... + ++.+|+.+++.++|++++ .+..++...
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~----~~~~E~~il~~L~~~~~i~~i~~~~~~~ 75 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------P----QLLYESKIYRILQGGTGIPNVRWFGVEG 75 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------C----CHHHHHHHHHHTTTSTTCCCEEEEEEET
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------H----HHHHHHHHHHHhcCCCCCCeEEEEEeeC
Confidence 467999999999999999999974 678999975543221 1 236799999999975554 554444444
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEe
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 957 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILl 957 (1137)
+ ..+|||||+ +++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+||||
T Consensus 76 ~--------------~~~lvme~~-g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl 136 (483)
T 3sv0_A 76 D--------------YNVLVMDLL-GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLM 136 (483)
T ss_dssp T--------------EEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred C--------------EEEEEEECC-CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEE
Confidence 3 569999999 89999999752 2469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001152 958 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1037 (1137)
Q Consensus 958 d~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1037 (1137)
+.+. ..+.+||+|||+++......... ...........||+.|+|||++.+ ..++.++|||||||++||
T Consensus 137 ~~~~----~~~~vkL~DFGla~~~~~~~~~~---~~~~~~~~~~~gt~~Y~aPE~~~~----~~~s~~sDvwSlGvil~e 205 (483)
T 3sv0_A 137 GLGR----RANQVYIIDFGLAKKYRDTSTHQ---HIPYRENKNLTGTARYASVNTHLG----IEQSRRDDLESLGYVLMY 205 (483)
T ss_dssp CCGG----GTTCEEECCCTTCEECBCTTTCC---BCCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred ecCC----CCCeEEEEeCCcceeccCCcccc---ccccccccccCCCccccCHHHhcC----CCCChHHHHHHHHHHHHH
Confidence 4210 11789999999998665432211 001112235579999999999876 568899999999999999
Q ss_pred HHhCCCCCCCCCH---HHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1038 LLTLQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1038 LLTG~~Pf~~~~~---~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|++|+.||.+... .+.+..+........... ....+++++.+|+.+||+.||++
T Consensus 206 lltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~-----------------------l~~~~p~~l~~li~~cl~~dP~~ 262 (483)
T 3sv0_A 206 FLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA-----------------------LCRGYPTEFASYFHYCRSLRFDD 262 (483)
T ss_dssp HHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH-----------------------HHTTSCHHHHHHHHHHHTCCTTC
T ss_pred HHhCCCCCccccchhHHHHHHHHhhccccccHHH-----------------------HhcCCcHHHHHHHHHHhcCChhh
Confidence 9999999987433 333333321110000000 11144567999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001152 1115 RPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~ 1128 (1137)
||++.+|++.+...
T Consensus 263 RPs~~el~~~L~~l 276 (483)
T 3sv0_A 263 KPDYSYLKRLFRDL 276 (483)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHH
Confidence 99999998876653
No 245
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.8e-34 Score=323.66 Aligned_cols=244 Identities=23% Similarity=0.255 Sum_probs=180.9
Q ss_pred CCCCceEe-eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHH-HhCCCCCcceeeeeEe
Q 001152 800 SFPSLSSC-DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRML-GALRHSCIVEMYGHKI 875 (1137)
Q Consensus 800 ~~~~y~l~-~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL-~~L~HpNIVkllg~~~ 875 (1137)
.+.+|.+. +.||+|+||.||+|.+. +..||+|+.... .. +.+|+.++ +..+||||+++++++.
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~----~~~e~~~~~~~~~h~~i~~~~~~~~ 81 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PK----ARREVELHWRASQCPHIVRIVDVYE 81 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HH----HHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---------HH----HHHHHHHHHHhccCCCchhHHhhhh
Confidence 35678887 78999999999999984 567899875311 11 25688887 5568999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 955 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NI 955 (1137)
... ......++||||+++++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 82 ~~~----------~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Ni 148 (299)
T 3m2w_A 82 NLY----------AGRKCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 148 (299)
T ss_dssp EEE----------TTEEEEEEEECCCCSCBHHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred hhc----------CCCceEEEEEeecCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 511 011267999999999999999986 2334699999999999999999999999999999999999
Q ss_pred EeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001152 956 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1035 (1137)
Q Consensus 956 Lld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1035 (1137)
|++.+. ..+.+||+|||++..... ..++.++|||||||++
T Consensus 149 l~~~~~----~~~~~kl~Dfg~a~~~~~------------------------------------~~~~~~~DiwslG~il 188 (299)
T 3m2w_A 149 LYTSKR----PNAILKLTDFGFAKETTG------------------------------------EKYDKSCDMWSLGVIM 188 (299)
T ss_dssp EESSSS----TTCCEEECCCTTCEECTT------------------------------------CGGGGHHHHHHHHHHH
T ss_pred EEecCC----CCCcEEEecccccccccc------------------------------------ccCCchhhHHHHHHHH
Confidence 998731 126899999998743210 2345899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCc-hhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1036 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKP-EAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1036 ~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
|+|++|..||.+.........+.. .+. . .....+ ......++++.+++.+||+.||.+
T Consensus 189 ~el~tg~~pf~~~~~~~~~~~~~~----~~~---------------~--~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 247 (299)
T 3m2w_A 189 YILLCGYPPFYSNHGLAISPGMKT----RIR---------------M--GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ 247 (299)
T ss_dssp HHHHHSSCSCCC-------CCSCC----SSC---------------T--TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHCCCCCCCCcchhhhHHHHH----HHh---------------h--ccccCCchhcccCCHHHHHHHHHHcccChhh
Confidence 999999999976543322111100 000 0 000001 011245677999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001152 1115 RPTAGDLYEMFVARTS 1130 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~~~ 1130 (1137)
|||++|+++|+|+...
T Consensus 248 Rps~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 248 RMTITEFMNHPWIMQS 263 (299)
T ss_dssp SCCHHHHHTSHHHHTG
T ss_pred CCCHHHHhcChhhccc
Confidence 9999999999999755
No 246
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=9e-36 Score=339.68 Aligned_cols=271 Identities=16% Similarity=0.113 Sum_probs=186.6
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCC----ChHHHHHhHHhHHHHHHHHHhCC---------CCCc
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGS----SADEIRNFEYSCLGEVRMLGALR---------HSCI 867 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~----~~~~~e~~~~~~lrEi~iL~~L~---------HpNI 867 (1137)
..+|++.+.||+|+||+||+|++.+..||+|+........ .....+. +.+|+.+++.++ ||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~----~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEE----ILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHH----HHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHH----HHHHHHHHHHHHHhhccccccCCch
Confidence 3579999999999999999999998999999876543211 1111122 377888888775 6676
Q ss_pred ceeeeeEecCCCC----------------CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHH
Q 001152 868 VEMYGHKISSKWL----------------PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQ 931 (1137)
Q Consensus 868 Vkllg~~~~~~~~----------------~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~ 931 (1137)
|++++.+...... ...+..........|+||||+++|++.+.+.+ ..+++..++.|+.
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~ 168 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILH 168 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHH
Confidence 6666654311000 00000000012368999999999977666532 3589999999999
Q ss_pred HHHHHHHHHH-hCCeeeccCCCCCeEecccccc-------------CCCCCeEEEeecCccccccccccccccccCCCCC
Q 001152 932 DVAAALVELH-SKHIMHRDIKSENILIDLERKK-------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPA 997 (1137)
Q Consensus 932 QIa~gL~yLH-s~gIIHrDLKP~NILld~~~~~-------------~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~ 997 (1137)
||+.||+||| ++||+||||||+|||++.++.. ......+||+|||+|+.....
T Consensus 169 qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------------- 235 (336)
T 2vuw_A 169 QLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------------- 235 (336)
T ss_dssp HHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------------
T ss_pred HHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------------
Confidence 9999999999 9999999999999999976200 000128999999999765431
Q ss_pred CCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCH-HHHHHHHHcC-CCCCchhHHhhhcc
Q 001152 998 PDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL-LLELLTLQVPYMGLSE-LEIHDLIQMG-KRPRLTDELEALGS 1074 (1137)
Q Consensus 998 ~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi-L~ELLTG~~Pf~~~~~-~el~~~I~~g-~~p~l~~~l~~~~~ 1074 (1137)
..+||+.|+|||++.+ . .+.++||||+|++ .+++++|..||..... ......+... ....
T Consensus 236 --~~~gt~~y~aPE~~~g----~-~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 298 (336)
T 2vuw_A 236 --IVVFCDVSMDEDLFTG----D-GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT---------- 298 (336)
T ss_dssp --EEECCCCTTCSGGGCC----C-SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS----------
T ss_pred --cEEEeecccChhhhcC----C-CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc----------
Confidence 2369999999999985 2 2789999998777 7778889998853111 1122222211 1100
Q ss_pred cccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH-HHHHhh
Q 001152 1075 CHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY-EMFVAR 1128 (1137)
Q Consensus 1075 ~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~EVL-~~L~~~ 1128 (1137)
..........++++.+||.+||+.| |++|++ +|+|++
T Consensus 299 ------------~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 299 ------------KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp ------------CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred ------------ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 0011122367788999999999976 999999 999984
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.2e-35 Score=361.16 Aligned_cols=292 Identities=19% Similarity=0.179 Sum_probs=199.0
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeE
Q 001152 797 DPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 874 (1137)
Q Consensus 797 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~ 874 (1137)
+...+.+|++.+.||+|+||+||+|.+. +..||+|+.... ......+. +.+|+.++++++||||+++++++
T Consensus 9 pg~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~~----~~~Ei~iL~~L~HpnIV~l~~v~ 81 (676)
T 3qa8_A 9 PTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRER----WCLEIQIMKKLNHPNVVSAREVP 81 (676)
T ss_dssp --------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHHH----HHHHHHHHHHCCBTTBCCEEECC
T ss_pred CCCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHHH----HHHHHHHHHhCCCCCCCceeeee
Confidence 3445788999999999999999999974 577888874322 12333333 48899999999999999999987
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 001152 875 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 954 (1137)
Q Consensus 875 ~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~N 954 (1137)
...... ......++||||+++|+|.+++... .....+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 82 ~~~~~~--------~~~~~~~LVmEy~~ggsL~~~L~~~--~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~N 151 (676)
T 3qa8_A 82 DGLQKL--------APNDLPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 151 (676)
T ss_dssp TTTCCC--------CTTSSCCCEEECCSSCBHHHHHHSS--SCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTT
T ss_pred cccccc--------cCCCeEEEEEEeCCCCCHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHH
Confidence 652211 0112569999999999999999762 222368999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001152 955 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1034 (1137)
Q Consensus 955 ILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1034 (1137)
||++.++ ....+||+|||.+........ .....||+.|+|||++.+ ..++.++|||||||+
T Consensus 152 ILl~~~g----~~~~vKL~DFG~a~~~~~~~~-----------~~~~~gt~~Y~APE~l~~----~~~s~ksDIwSLGvi 212 (676)
T 3qa8_A 152 IVLQPGP----QRLIHKIIDLGYAKELDQGEL-----------CTEFVGTLQYLAPELLEQ----KKYTVTVDYWSFGTL 212 (676)
T ss_dssp EEEECCS----SSCEEEECSCCCCCBTTSCCC-----------CCCCCSCCTTCSSCSSCC----SCCSTTHHHHHHHHH
T ss_pred eEeecCC----CceeEEEcccccccccccccc-----------cccccCCcccCChHHhcc----CCCCchhHHHHHHHH
Confidence 9998662 124699999999976543211 123469999999999875 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001152 1035 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1114 (1137)
Q Consensus 1035 L~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~ 1114 (1137)
+|+|++|..||......... ...... .............. ...-..............++.+.+++.+||..||.+
T Consensus 213 LyeLltG~~Pf~~~~~~~~~--~~~i~~-~~~~~~~~~~~l~g-~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~k 288 (676)
T 3qa8_A 213 AFECITGFRPFLPNWQPVQW--HGKVRE-KSNEHIVVYDDLTG-AVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQ 288 (676)
T ss_dssp HHHHHSSCSSCCSSCHHHHS--STTCC-------CCSCCCCSS-SCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC-
T ss_pred HHHHHHCCCCCCcccchhhh--hhhhhc-ccchhhhhhhhhcc-ccccccccCCchhhchhhhHHHHHHHHHHccCCHhh
Confidence 99999999999764332110 000000 00000000000000 000000000111122357888999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001152 1115 RPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1115 RPSa~EVL~~L~~~ 1128 (1137)
|||++|+++|+|+.
T Consensus 289 RPTa~elL~hp~F~ 302 (676)
T 3qa8_A 289 RGTDPQNPNVGCFQ 302 (676)
T ss_dssp --CCTTCCCCTTHH
T ss_pred CcCHHHHhcCHHHH
Confidence 99999999999975
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-34 Score=340.01 Aligned_cols=269 Identities=14% Similarity=0.127 Sum_probs=187.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC-CCccee-------
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH-SCIVEM------- 870 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~H-pNIVkl------- 870 (1137)
...|.+.+.||+|+||+||+|++. ++.||||+....... .....+ .+.+|+.+++.++| +|....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-~~~~~~----~~~~E~~~~~~l~~~~~~~~~~~~~~~~ 151 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIK----QMKEEVLRLRLLRGIKNQKQAKVHLRFI 151 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCH----HHHHHHHGGGGSTTCCSHHHHHHHTCBC
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-cHHHHH----HHHHHHHHHHhhccCCCHHHHHHhcccc
Confidence 345889999999999999999986 688999986532211 112223 34889999999987 332211
Q ss_pred --eeeEecCCCC---CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001152 871 --YGHKISSKWL---PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE--TGEKHVSVKLALFIAQDVAAALVELHSK 943 (1137)
Q Consensus 871 --lg~~~~~~~~---~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~--~~~~~ls~~~i~~I~~QIa~gL~yLHs~ 943 (1137)
++........ ....+.........+++|+++ +++|.++++.... .....+++..++.|+.||+.||+|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 230 (413)
T 3dzo_A 152 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 230 (413)
T ss_dssp CCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111110000 000000001123568888876 5999999864321 2234688899999999999999999999
Q ss_pred CeeeccCCCCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcccc------
Q 001152 944 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH------ 1017 (1137)
Q Consensus 944 gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------ 1017 (1137)
||+||||||+|||++.+ +.+||+|||+++...... ....| +.|+|||++.+..
T Consensus 231 ~iiHrDiKp~NILl~~~-------~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~~ 289 (413)
T 3dzo_A 231 GLVHTYLRPVDIVLDQR-------GGVFLTGFEHLVRDGASA-------------VSPIG-RGFAPPETTAERMLPFGQH 289 (413)
T ss_dssp TEECSCCCGGGEEECTT-------CCEEECCGGGCEETTEEE-------------CCCCC-TTTCCHHHHHHHTSTTGGG
T ss_pred CcccCCcccceEEEecC-------CeEEEEeccceeecCCcc-------------ccCCC-CceeCchhhhccccccccc
Confidence 99999999999999988 779999999987654321 12357 8999999994321
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001152 1018 KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1097 (1137)
Q Consensus 1018 ~~~~~s~ksDVWSLGviL~ELLTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1137)
....++.++|||||||++|||++|+.||......+....+ +. .. ...+
T Consensus 290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~-----------~~------------~~---------~~~~ 337 (413)
T 3dzo_A 290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI-----------FR------------SC---------KNIP 337 (413)
T ss_dssp CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG-----------GS------------SC---------CCCC
T ss_pred cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHH-----------Hh------------hc---------ccCC
Confidence 2345788999999999999999999999764322111110 00 00 0234
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001152 1098 SFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1128 (1137)
Q Consensus 1098 ~~L~dLl~~CL~~DP~~RPSa~EVL~~L~~~ 1128 (1137)
+.+.+|+.+||+.||.+||++.++++|+|+.
T Consensus 338 ~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~ 368 (413)
T 3dzo_A 338 QPVRALLEGFLRYPKEDRLLPLQAMETPEYE 368 (413)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence 5699999999999999999999999999985
No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.7e-33 Score=315.06 Aligned_cols=233 Identities=14% Similarity=0.085 Sum_probs=177.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 879 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~ 879 (1137)
.+|++.+.||+|+||.||+|++. +..||+|+...... ......+. +.+|+.++++++||||+++++++.+.+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~----~~~e~~~l~~l~hp~iv~~~~~~~~~~- 104 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV-LPDDVLQE----TLSRTLRLSRIDKPGVARVLDVVHTRA- 104 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC-SCHHHHHH----HHHHHHHHHTCCCTTBCCEEEEEEETT-
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc-cCHHHHHH----HHHHHHHHhcCCCCCcceeeEEEEECC-
Confidence 67999999999999999999986 57788887532221 11222333 488999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEecc
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 959 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~ 959 (1137)
..|+||||++|++|.++++. .....++.+|+.||+.||+|||++||+||||||+|||++.
T Consensus 105 -------------~~~lv~e~~~g~~L~~~l~~-------~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~ 164 (286)
T 3uqc_A 105 -------------GGLVVAEWIRGGSLQEVADT-------SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI 164 (286)
T ss_dssp -------------EEEEEEECCCEEEHHHHHTT-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEET
T ss_pred -------------cEEEEEEecCCCCHHHHHhc-------CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcC
Confidence 67999999999999999853 1356678999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001152 960 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1039 (1137)
Q Consensus 960 ~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1039 (1137)
+ +.+||+++| |++| ++.++|||||||++|+|+
T Consensus 165 ~-------g~~kl~~~~------------------------------~~~~-----------~~~~~Di~slG~il~ell 196 (286)
T 3uqc_A 165 D-------GDVVLAYPA------------------------------TMPD-----------ANPQDDIRGIGASLYALL 196 (286)
T ss_dssp T-------SCEEECSCC------------------------------CCTT-----------CCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEecc------------------------------ccCC-----------CCchhHHHHHHHHHHHHH
Confidence 7 778887443 2222 458999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001152 1040 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1119 (1137)
Q Consensus 1040 TG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa~ 1119 (1137)
||+.||.+.+..+.............. .........++++.+++.+||+.||.+| |+.
T Consensus 197 tg~~Pf~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~ 254 (286)
T 3uqc_A 197 VNRWPLPEAGVRSGLAPAERDTAGQPI---------------------EPADIDRDIPFQISAVAARSVQGDGGIR-SAS 254 (286)
T ss_dssp HSEECSCCCSBCCCSEECCBCTTSCBC---------------------CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHH
T ss_pred HCCCCCCcCCcchhhHHHHHHhccCCC---------------------ChhhcccCCCHHHHHHHHHHcccCCccC-CHH
Confidence 999999864332110000000000000 0001112456779999999999999999 999
Q ss_pred HHHHHHHhhcC
Q 001152 1120 DLYEMFVARTS 1130 (1137)
Q Consensus 1120 EVL~~L~~~~~ 1130 (1137)
|+++.+.....
T Consensus 255 el~~~L~~~~~ 265 (286)
T 3uqc_A 255 TLLNLMQQATA 265 (286)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999988643
No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-33 Score=351.93 Aligned_cols=242 Identities=23% Similarity=0.257 Sum_probs=186.3
Q ss_pred CCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCC
Q 001152 802 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 878 (1137)
Q Consensus 802 ~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~ 878 (1137)
.+|++.+.||+|+||+||+|.+. +..||+|+.. .. ......+ .+.+|+.++++++|||||++++++...+
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~--~~-~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 152 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLV--HS-GDAEAQA----MAMAERQFLAEVVHPSIVQIFNFVEHTD 152 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESC--SS-CCHHHHH----HHHHHHGGGGGCCCTTBCCEEEEEEEEC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeC--cc-CCHHHHH----HHHHHHHHHHhcCCCCcCeEeeeEeecC
Confidence 68999999999999999999984 5678888642 21 1222223 3488999999999999999999998754
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEec
Q 001152 879 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 958 (1137)
Q Consensus 879 ~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld 958 (1137)
.. .....||||||++|++|.+++.. .+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 153 ~~---------~~~~~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~ 216 (681)
T 2pzi_A 153 RH---------GDPVGYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216 (681)
T ss_dssp TT---------SCEEEEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred CC---------CCceeEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe
Confidence 21 11236999999999999987643 599999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001152 959 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1038 (1137)
Q Consensus 959 ~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1038 (1137)
.+ .+||+|||+++..... ....||+.|+|||++.+ .++.++|||||||++|+|
T Consensus 217 ~~--------~~kl~DFG~a~~~~~~--------------~~~~gt~~y~aPE~~~~-----~~~~~sDi~slG~~l~~l 269 (681)
T 2pzi_A 217 EE--------QLKLIDLGAVSRINSF--------------GYLYGTPGFQAPEIVRT-----GPTVATDIYTVGRTLAAL 269 (681)
T ss_dssp SS--------CEEECCCTTCEETTCC--------------SCCCCCTTTSCTTHHHH-----CSCHHHHHHHHHHHHHHH
T ss_pred CC--------cEEEEecccchhcccC--------------CccCCCccccCHHHHcC-----CCCCceehhhhHHHHHHH
Confidence 54 6999999998765432 13469999999999875 247999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHcCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001152 1039 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1118 (1137)
Q Consensus 1039 LTG~~Pf~~~~~~el~~~I~~g~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLl~~CL~~DP~~RPSa 1118 (1137)
++|..||.+.... . .+. .......++.+.+|+.+||+.||.+||+.
T Consensus 270 ~~g~~~~~~~~~~--------~-~~~-------------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~ 315 (681)
T 2pzi_A 270 TLDLPTRNGRYVD--------G-LPE-------------------------DDPVLKTYDSYGRLLRRAIDPDPRQRFTT 315 (681)
T ss_dssp HSCCCEETTEECS--------S-CCT-------------------------TCHHHHHCHHHHHHHHHHTCSSGGGSCSS
T ss_pred HhCCCCCcccccc--------c-ccc-------------------------cccccccCHHHHHHHhhhccCChhhCCCH
Confidence 9999888642100 0 000 00011334568999999999999999987
Q ss_pred HHHHHHHHh
Q 001152 1119 GDLYEMFVA 1127 (1137)
Q Consensus 1119 ~EVL~~L~~ 1127 (1137)
.+++.+.+.
T Consensus 316 ~~~l~~~l~ 324 (681)
T 2pzi_A 316 AEEMSAQLT 324 (681)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777666554
No 251
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.4e-33 Score=349.58 Aligned_cols=289 Identities=20% Similarity=0.215 Sum_probs=163.3
Q ss_pred cccccCCCCCCcccCCCCCCC--CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCCCCcE
Q 001152 19 KEKLPSEANKINNEKNGSVND--DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLRN 95 (1137)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~--l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~-~IP~~~~~L~~L~~ 95 (1137)
++.|.+..|++++..+..+.. +++|++|+|++|++++.+|..|+.+ ++|+.|+|++|.++ .+|..|+++++|++
T Consensus 370 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 446 (768)
T 3rgz_A 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC---SELVSLHLSFNYLSGTIPSSLGSLSKLRD 446 (768)
T ss_dssp CSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGC---TTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcC---CCCCEEECcCCcccCcccHHHhcCCCCCE
Confidence 333444444443333333333 4445555555555554454444333 55555555555554 44555555555555
Q ss_pred EEccCCCCC-cccccccCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccC
Q 001152 96 LKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1137)
Q Consensus 96 L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1137)
|+|++|.++ .+|..++.+++|+.|+|++|.+. .+|..+.++++|+.|+|++|.+ .+.+|.+++.+++|++|++++
T Consensus 447 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l---~~~~p~~~~~l~~L~~L~L~~ 523 (768)
T 3rgz_A 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL---TGEIPKWIGRLENLAILKLSN 523 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC---CSCCCGGGGGCTTCCEEECCS
T ss_pred EECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCcc---CCcCChHHhcCCCCCEEECCC
Confidence 555555554 44555555555555555555533 4445555555555555555332 233445555555555555555
Q ss_pred CCCc-ccCccccCCCCCCEEEccCCCCC-ccchhh---------------------------------------------
Q 001152 174 FSIR-YLPPEIGCLSNLEQLDLSFNKMK-YLPTEI--------------------------------------------- 206 (1137)
Q Consensus 174 N~L~-~IP~~l~~L~~L~~L~Ls~N~L~-~LP~~l--------------------------------------------- 206 (1137)
|+++ .+|..++.+++|++|+|++|+++ .+|..+
T Consensus 524 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (768)
T 3rgz_A 524 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 603 (768)
T ss_dssp SCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGG
T ss_pred CcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchh
Confidence 5555 45555555555555555555554 444322
Q ss_pred -------------------------cCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCC
Q 001152 207 -------------------------CYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQ 260 (1137)
Q Consensus 207 -------------------------~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~ 260 (1137)
+.+++|+.|+|++|+|+ .||.+++++++|+.|+|++|+|+|.+|..|+++++|+
T Consensus 604 ~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~ 683 (768)
T 3rgz_A 604 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683 (768)
T ss_dssp GGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred hhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCC
Confidence 22345566666666665 5566666666666666666666666666666666666
Q ss_pred EEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCcccccccccccCCCc-----ccCCCCCcccCCCCCC
Q 001152 261 NLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPM-----LENDGNVSFSGSRHTS 325 (1137)
Q Consensus 261 ~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~l~g~i-----l~~~~~~sf~GN~~lC 325 (1137)
.|||++|+|++ .+|..+. ....+..+++++|.++|+| +.+|...+|.|||+||
T Consensus 684 ~LdLs~N~l~g--~ip~~l~----------~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lc 741 (768)
T 3rgz_A 684 ILDLSSNKLDG--RIPQAMS----------ALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 741 (768)
T ss_dssp EEECCSSCCEE--CCCGGGG----------GCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEE
T ss_pred EEECCCCcccC--cCChHHh----------CCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhc
Confidence 66666666665 4555443 1235777888888888876 6778899999999999
No 252
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=5e-30 Score=324.64 Aligned_cols=254 Identities=20% Similarity=0.267 Sum_probs=234.6
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCCCCcE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLRN 95 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~-~IP~~~~~L~~L~~ 95 (1137)
+.++.|.+..|+++...+..|.++++|++|+|++|++++.+|..|+.+ ++|+.|+|++|.++ .+|..|..+++|++
T Consensus 394 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 470 (768)
T 3rgz_A 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL---SKLRDLKLWLNMLEGEIPQELMYVKTLET 470 (768)
T ss_dssp CCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC---TTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred CCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcC---CCCCEEECCCCcccCcCCHHHcCCCCceE
Confidence 479999999999999999999999999999999999999999988766 89999999999998 78999999999999
Q ss_pred EEccCCCCC-cccccccCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccC
Q 001152 96 LKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1137)
Q Consensus 96 L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1137)
|+|++|+++ .+|..++++++|++|+|++|.+. .+|..+..+++|+.|+|++| ...+.+|..++.+++|+.|++++
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N---~l~~~~p~~l~~l~~L~~L~Ls~ 547 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN---SFSGNIPAELGDCRSLIWLDLNT 547 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS---CCEEECCGGGGGCTTCCEEECCS
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCC---cccCcCCHHHcCCCCCCEEECCC
Confidence 999999998 78999999999999999999966 78889999999999999995 45567899999999999999999
Q ss_pred CCCc-ccCccc---------------------------------------------------------------------
Q 001152 174 FSIR-YLPPEI--------------------------------------------------------------------- 183 (1137)
Q Consensus 174 N~L~-~IP~~l--------------------------------------------------------------------- 183 (1137)
|.++ .+|..+
T Consensus 548 N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~ 627 (768)
T 3rgz_A 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 627 (768)
T ss_dssp SEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCS
T ss_pred CccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchh
Confidence 9987 666543
Q ss_pred -cCCCCCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCC
Q 001152 184 -GCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQ 260 (1137)
Q Consensus 184 -~~L~~L~~L~Ls~N~L~-~LP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~ 260 (1137)
+.+++|+.|+|++|+|+ .+|.+|+++++|+.|+|++|+|+ .||..++++++|+.|||++|+|+|.+|..+..+++|+
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 34578999999999999 89999999999999999999999 8999999999999999999999999999999999999
Q ss_pred EEEccCCcCCCCCCCCcc
Q 001152 261 NLNLQYNKLLSYCQVPSW 278 (1137)
Q Consensus 261 ~L~Ls~N~L~~~~~iP~~ 278 (1137)
+|+|++|+|+| .||..
T Consensus 708 ~L~ls~N~l~g--~iP~~ 723 (768)
T 3rgz_A 708 EIDLSNNNLSG--PIPEM 723 (768)
T ss_dssp EEECCSSEEEE--ECCSS
T ss_pred EEECcCCcccc--cCCCc
Confidence 99999999998 66654
No 253
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=3.5e-28 Score=276.32 Aligned_cols=244 Identities=23% Similarity=0.309 Sum_probs=138.0
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L 96 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.+|..+. ++|++|
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~Ls~n~l~~l~~~~~--~~L~~L 126 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPL---VKLERLYLSKNQLKELPEKMP--KTLQEL 126 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTC---TTCCEEECCSSCCSBCCSSCC--TTCCEE
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCC---CCCCEEECCCCcCCccChhhc--ccccEE
Confidence 345556666666666665566666666666666666665555544333 566666666666666655443 456666
Q ss_pred EccCCCCCcccc-cccCCCCCCEEEccCCCCC---CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEecc
Q 001152 97 KFFGNEINLFPS-EVGNLLGLECLQIKISSPG---VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1137)
Q Consensus 97 ~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~~~---~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls 172 (1137)
+|++|.|+.++. .+.++++|+.|+|++|.+. ..+..+..+++|++|++++|.+.. +|..+. ++|+.|+++
T Consensus 127 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~----l~~~~~--~~L~~L~l~ 200 (330)
T 1xku_A 127 RVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT----IPQGLP--PSLTELHLD 200 (330)
T ss_dssp ECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS----CCSSCC--TTCSEEECT
T ss_pred ECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc----CCcccc--ccCCEEECC
Confidence 666666655533 3555666666666666543 333445556666666666544332 232222 456666666
Q ss_pred CCCCccc-CccccCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCc
Q 001152 173 HFSIRYL-PPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1137)
Q Consensus 173 ~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p 250 (1137)
+|+++.+ |..|..+++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+.+|.++..+++|+.|+|++|+|+++++
T Consensus 201 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 201 GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp TSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCCccCh
Confidence 6666544 345556666666666666666443 24555666666666666666666666666666666666666666555
Q ss_pred ccccCC------CCCCEEEccCCcCCC
Q 001152 251 LDLCLM------HNLQNLNLQYNKLLS 271 (1137)
Q Consensus 251 ~~l~~L------~~L~~L~Ls~N~L~~ 271 (1137)
..|+.. ..|+.|+|++|++..
T Consensus 281 ~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 281 NDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp TSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred hhcCCcccccccccccceEeecCcccc
Confidence 554332 455566666666544
No 254
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=9.2e-29 Score=277.82 Aligned_cols=254 Identities=22% Similarity=0.227 Sum_probs=222.8
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc---CccccCCCCCcEE
Q 001152 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI---PKSVGRYEKLRNL 96 (1137)
Q Consensus 20 ~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I---P~~~~~L~~L~~L 96 (1137)
..+....+.++.++...+ ++|++|+|++|+|+...+..|.. +++|++|+|++|.++.+ |..+..+++|++|
T Consensus 10 ~~l~c~~~~l~~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 83 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTGIP---SSATRLELESNKLQSLPHGVFDK---LTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYL 83 (306)
T ss_dssp TEEECCSSCCSSCCSCCC---TTCCEEECCSSCCCCCCTTTTTT---CTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEE
T ss_pred CEEEcCCCCcccCCCCCC---CCCCEEECCCCccCccCHhHhhc---cccCCEEECCCCccCcccCcccccccccccCEE
Confidence 357788888999876443 68999999999999777665654 49999999999999865 6778889999999
Q ss_pred EccCCCCCcccccccCCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCC
Q 001152 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1137)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~--~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1137)
+|++|.++.+|..+.++++|++|+|++|.+...+ ..+..+++|++|++++|.+ ....+..+..+++|+.|++++|
T Consensus 84 ~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l---~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 84 DLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT---RVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp ECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCC---EECSTTTTTTCTTCCEEECTTC
T ss_pred ECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcC---CccchhhcccCcCCCEEECCCC
Confidence 9999999999999999999999999999977766 4789999999999999654 4455667889999999999999
Q ss_pred CCcc--cCccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeccCCcCCCCCc
Q 001152 175 SIRY--LPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGS 250 (1137)
Q Consensus 175 ~L~~--IP~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdLS~N~Lsg~~p 250 (1137)
.++. +|..+..+++|++|+|++|+|+.+ |..+..+++|+.|+|++|+++.+|. .+..+++|+.|+|++|+|++.++
T Consensus 161 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 161 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 240 (306)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSS
T ss_pred ccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCH
Confidence 9985 788999999999999999999976 6789999999999999999998865 68889999999999999999999
Q ss_pred ccccCCC-CCCEEEccCCcCCCCCCCCcchhhc
Q 001152 251 LDLCLMH-NLQNLNLQYNKLLSYCQVPSWICCN 282 (1137)
Q Consensus 251 ~~l~~L~-~L~~L~Ls~N~L~~~~~iP~~~~~~ 282 (1137)
..+..++ +|+.|+|++|+|+|.|.+..+..|.
T Consensus 241 ~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l 273 (306)
T 2z66_A 241 QELQHFPSSLAFLNLTQNDFACTCEHQSFLQWI 273 (306)
T ss_dssp SSCCCCCTTCCEEECTTCCEECSGGGHHHHHHH
T ss_pred HHHHhhhccCCEEEccCCCeecccChHHHHHHH
Confidence 8999985 9999999999999988876655553
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=1.2e-29 Score=287.38 Aligned_cols=224 Identities=21% Similarity=0.243 Sum_probs=156.3
Q ss_pred CCCCEEEccCCCCCC--CCcccccCCCCCCCccEEEeec-CCCC-ccCccccCCCCCcEEEccCCCCC-cccccccCCCC
Q 001152 41 DDDSVIDVSGKTVDF--PLIESYGNRGGDNSVEGLYLYK-NVLN-LIPKSVGRYEKLRNLKFFGNEIN-LFPSEVGNLLG 115 (1137)
Q Consensus 41 ~~L~~LdLs~N~L~~--~~p~~~~~l~~L~~L~~L~Ls~-N~L~-~IP~~~~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~ 115 (1137)
..++.|+|++|+|++ .+|..|+.+ ++|++|+|++ |.++ .+|..|+++++|++|+|++|.|+ .+|..|+++++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l---~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 126 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANL---PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGC---TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTT
T ss_pred ceEEEEECCCCCccCCcccChhHhCC---CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCC
Confidence 467777777777776 666666544 7777777773 6665 56777777777777777777776 66777777777
Q ss_pred CCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCC-CCcEEeccCCCCc-ccCccccCCCCCCEE
Q 001152 116 LECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLK-CLTKLSVCHFSIR-YLPPEIGCLSNLEQL 192 (1137)
Q Consensus 116 L~~L~Ls~N~~~-~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~-~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L 192 (1137)
|++|+|++|.+. .+|..+..+++|++|++++|. ..+.+|..+..++ +|+.|++++|+++ .+|..+..++ |++|
T Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR---ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC---CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEE
T ss_pred CCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc---ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEE
Confidence 777777777755 566667777777777777743 3345666677776 7777777777776 6666666665 7777
Q ss_pred EccCCCCC-ccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 193 DLSFNKMK-YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 193 ~Ls~N~L~-~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+|++|+|+ .+|..|..+++|+.|+|++|+++..++.+..+++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++
T Consensus 203 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 77777776 45666677777777777777777544446667777777777777776666677777777777777777765
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=3.3e-29 Score=283.69 Aligned_cols=247 Identities=17% Similarity=0.177 Sum_probs=221.5
Q ss_pred CCcccccCCCCCCcc--cCCCCCCCCCCCCEEEccC-CCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCCC
Q 001152 17 PIKEKLPSEANKINN--EKNGSVNDDDDDSVIDVSG-KTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEK 92 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~--l~~~~f~~l~~L~~LdLs~-N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~-~IP~~~~~L~~ 92 (1137)
..+..|.+..|+|++ ..+..|.++++|++|+|++ |++.+.+|..|+.+ ++|++|+|++|.++ .+|..|.++++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l---~~L~~L~Ls~n~l~~~~p~~~~~l~~ 126 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKL---TQLHYLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGC---TTCSEEEEEEECCEEECCGGGGGCTT
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcC---CCCCEEECcCCeeCCcCCHHHhCCCC
Confidence 368889999999998 6788999999999999995 99999999888766 99999999999998 78999999999
Q ss_pred CcEEEccCCCCC-cccccccCCCCCCEEEccCCCCC-CCcccccCCC-CCCEEECCCCCCCCCcccchhhhcCCCCCcEE
Q 001152 93 LRNLKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLK-GLKELELSKVPPRPSVLTLLSEIAGLKCLTKL 169 (1137)
Q Consensus 93 L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~L~-~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L 169 (1137)
|++|+|++|.|+ .+|..++++++|++|+|++|.+. .+|..+..+. +|+.|++++|. ..+.+|..+..++ |+.|
T Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~---l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR---LTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE---EEEECCGGGGGCC-CSEE
T ss_pred CCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe---eeccCChHHhCCc-ccEE
Confidence 999999999998 78999999999999999999977 7888899998 99999999954 4457788888887 9999
Q ss_pred eccCCCCc-ccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeccCCcCCC
Q 001152 170 SVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 170 ~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~LdLS~N~Lsg 247 (1137)
++++|.++ .+|..|..+++|+.|+|++|+++..+..+..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++
T Consensus 203 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 99999998 5667889999999999999999966666889999999999999999 889999999999999999999998
Q ss_pred CCcccccCCCCCCEEEccCCcCCC
Q 001152 248 LGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 248 ~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
.+|. ...+++|+.|++++|+.-|
T Consensus 283 ~ip~-~~~l~~L~~l~l~~N~~lc 305 (313)
T 1ogq_A 283 EIPQ-GGNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp ECCC-STTGGGSCGGGTCSSSEEE
T ss_pred cCCC-CccccccChHHhcCCCCcc
Confidence 8885 4889999999999998443
No 257
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=3e-28 Score=290.61 Aligned_cols=250 Identities=20% Similarity=0.200 Sum_probs=197.1
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCc
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLR 94 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~ 94 (1137)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|.|++..|..|..+ ++|++|+|++|.|+.+|. .|.++++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 107 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNL---FNLRTLGLRSNRLKLIPLGVFTGLSNLT 107 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCCSCCTTSSTTCTTCC
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCC---ccCCEEECCCCcCCccCcccccCCCCCC
Confidence 4579999999999999999999999999999999999999888777655 999999999999999986 478999999
Q ss_pred EEEccCCCCCcc-cccccCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEecc
Q 001152 95 NLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1137)
Q Consensus 95 ~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~~~~~-~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls 172 (1137)
+|+|++|.|+.+ |..|.++++|+.|+|++|.+..+ +..|..+++|+.|+|++|.+.. ..+..+..+++|+.|+++
T Consensus 108 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---~~~~~l~~l~~L~~L~l~ 184 (477)
T 2id5_A 108 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS---IPTEALSHLHGLIVLRLR 184 (477)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS---CCHHHHTTCTTCCEEEEE
T ss_pred EEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc---cChhHhcccCCCcEEeCC
Confidence 999999999966 66799999999999999997654 4678999999999999966543 223457888899999999
Q ss_pred CCCCcccCc-cccCCCCCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeccCCcCCCCC
Q 001152 173 HFSIRYLPP-EIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLG 249 (1137)
Q Consensus 173 ~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~-~LP~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdLS~N~Lsg~~ 249 (1137)
+|.++.++. .|..+++|+.|+|++|.+. .+|..+....+|+.|+|++|+|+.+|. .+..+++|+.|+|++|+|++++
T Consensus 185 ~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 264 (477)
T 2id5_A 185 HLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 264 (477)
T ss_dssp SCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEEC
T ss_pred CCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccC
Confidence 998886655 6777777777777776543 566555555566666666666666663 4556666666666666666666
Q ss_pred cccccCCCCCCEEEccCCcCCC
Q 001152 250 SLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 250 p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+..|..+++|+.|+|++|++++
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~ 286 (477)
T 2id5_A 265 GSMLHELLRLQEIQLVGGQLAV 286 (477)
T ss_dssp TTSCTTCTTCCEEECCSSCCSE
T ss_pred hhhccccccCCEEECCCCccce
Confidence 6666666666666666666655
No 258
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.96 E-value=3.5e-28 Score=287.53 Aligned_cols=253 Identities=20% Similarity=0.181 Sum_probs=200.7
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCc-ccccCCCCCCCccEEEeecCCCCcc-CccccCCCCC
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLI-ESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKL 93 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p-~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L 93 (1137)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|.+.+.++ ..| .++++|++|+|++|.++.+ |..|.++++|
T Consensus 29 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~---~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 105 (455)
T 3v47_A 29 PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTF---RGLSSLIILKLDYNQFLQLETGAFNGLANL 105 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTT---TTCTTCCEEECTTCTTCEECTTTTTTCTTC
T ss_pred CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccc---cccccCCEEeCCCCccCccChhhccCcccC
Confidence 3578999999999999999999999999999999999876554 344 4558999999999999866 6789999999
Q ss_pred cEEEccCCCCCc-cccc--ccCCCCCCEEEccCCCCCCC-ccc-ccCCCCCCEEECCCCCCCCCcccc------------
Q 001152 94 RNLKFFGNEINL-FPSE--VGNLLGLECLQIKISSPGVN-GFA-LNKLKGLKELELSKVPPRPSVLTL------------ 156 (1137)
Q Consensus 94 ~~L~Ls~N~L~~-lP~~--l~~L~~L~~L~Ls~N~~~~~-~~~-~~~L~~L~~L~Ls~n~ln~~~~~l------------ 156 (1137)
++|+|++|.|+. +|.. |.++++|++|+|++|.+... |.. +.++++|++|++++|.+.......
T Consensus 106 ~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L 185 (455)
T 3v47_A 106 EVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLL 185 (455)
T ss_dssp CEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEE
T ss_pred CEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccc
Confidence 999999999984 4554 88899999999999987665 443 788899999999887654332110
Q ss_pred -------------------------------------------hhhhc--------------------------------
Q 001152 157 -------------------------------------------LSEIA-------------------------------- 161 (1137)
Q Consensus 157 -------------------------------------------p~~l~-------------------------------- 161 (1137)
|..+.
T Consensus 186 ~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 265 (455)
T 3v47_A 186 RLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPD 265 (455)
T ss_dssp ECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCC
T ss_pred ccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCc
Confidence 11000
Q ss_pred -------CCCCCcEEeccCCCCcc-cCccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-CccccC
Q 001152 162 -------GLKCLTKLSVCHFSIRY-LPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYL 231 (1137)
Q Consensus 162 -------~L~~L~~L~Ls~N~L~~-IP~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~ 231 (1137)
.+++|+.|++++|.++. +|..|+.+++|++|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..+..
T Consensus 266 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 345 (455)
T 3v47_A 266 NFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345 (455)
T ss_dssp TTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTT
T ss_pred ccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcC
Confidence 01356666666666663 456788889999999999999865 56788899999999999999866 566788
Q ss_pred CCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 232 LQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 232 L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+++|+.|+|++|+|++++|..|..+++|++|+|++|+|++
T Consensus 346 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 9999999999999999888888999999999999999886
No 259
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=5e-28 Score=275.42 Aligned_cols=240 Identities=18% Similarity=0.242 Sum_probs=125.2
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCcEEE
Q 001152 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLK 97 (1137)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~~L~ 97 (1137)
+..+.+..+.++.++...+ ++|++|+|++|+|++..+..|..+ ++|++|+|++|.++.+ |..|.++++|++|+
T Consensus 35 l~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 35 LRVVQCSDLGLKAVPKEIS---PDTTLLDLQNNDISELRKDDFKGL---QHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp TTEEECCSSCCSSCCSCCC---TTCCEEECCSSCCCEECTTTTTTC---TTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred CCEEECCCCCccccCCCCC---CCCeEEECCCCcCCccCHhHhhCC---CCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 4445555555555543322 455555555555555544444333 5555555555555544 34555555555555
Q ss_pred ccCCCCCcccccccCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCC
Q 001152 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1137)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~-~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1137)
|++|.|+.+|..+. ++|++|+|++|.+..++. .+..+++|+.|++++|.+.. .+..|..+..+ +|+.|++++|++
T Consensus 109 L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN-SGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG-GGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc-CCCCcccccCC-ccCEEECcCCCC
Confidence 55555555555443 455555555555444442 35555555555555543321 12233344444 555555555555
Q ss_pred cccCccccCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeccCCcCCCCCccccc
Q 001152 177 RYLPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLC 254 (1137)
Q Consensus 177 ~~IP~~l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdLS~N~Lsg~~p~~l~ 254 (1137)
+.+|..+. ++|+.|+|++|+++.++ ..+..+++|+.|+|++|+|+.++. .+..+++|+.|+|++|+|+.+++ .+.
T Consensus 185 ~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~l~ 261 (332)
T 2ft3_A 185 TGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPA-GLP 261 (332)
T ss_dssp SSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCT-TGG
T ss_pred CccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecCh-hhh
Confidence 55555433 45555555555555443 345555555555555555554432 45555555555555555554432 455
Q ss_pred CCCCCCEEEccCCcCCC
Q 001152 255 LMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 255 ~L~~L~~L~Ls~N~L~~ 271 (1137)
.+++|+.|+|++|+|+.
T Consensus 262 ~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITK 278 (332)
T ss_dssp GCTTCCEEECCSSCCCB
T ss_pred cCccCCEEECCCCCCCc
Confidence 55555555555555554
No 260
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2e-27 Score=281.24 Aligned_cols=253 Identities=20% Similarity=0.299 Sum_probs=222.7
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCCCCcEEE
Q 001152 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLK 97 (1137)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP-~~~~~L~~L~~L~ 97 (1137)
...+....++++.++.+.. +++++|+|++|+|++..+..|..+ ++|+.|+|++|.|+.++ ..|.++++|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l---~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~ 118 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS---TNTRLLNLHENQIQIIKVNSFKHL---RHLEILQLSRNHIRTIEIGAFNGLANLNTLE 118 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC---TTCSEEECCSCCCCEECTTTTSSC---SSCCEEECCSSCCCEECGGGGTTCSSCCEEE
T ss_pred CCEEEeCCCCcCcCCCCCC---CCCcEEEccCCcCCeeCHHHhhCC---CCCCEEECCCCcCCccChhhccCCccCCEEE
Confidence 4567778888998876544 689999999999999888777655 99999999999999886 5799999999999
Q ss_pred ccCCCCCcccc-cccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchh-hhcCCCCCcEEeccCC
Q 001152 98 FFGNEINLFPS-EVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLS-EIAGLKCLTKLSVCHF 174 (1137)
Q Consensus 98 Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~-~l~~L~~L~~L~Ls~N 174 (1137)
|++|+|+.+|. .|.++++|+.|+|++|.+..++ ..|..+++|+.|+|++| +....++. .|.++++|+.|++++|
T Consensus 119 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~---~~l~~i~~~~~~~l~~L~~L~L~~n 195 (440)
T 3zyj_A 119 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL---KRLSYISEGAFEGLSNLRYLNLAMC 195 (440)
T ss_dssp CCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC---TTCCEECTTTTTTCSSCCEEECTTS
T ss_pred CCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC---CCcceeCcchhhcccccCeecCCCC
Confidence 99999999876 5899999999999999987766 47899999999999984 33444444 6889999999999999
Q ss_pred CCcccCccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeccCCcCCCCCccc
Q 001152 175 SIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLD 252 (1137)
Q Consensus 175 ~L~~IP~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~LdLS~N~Lsg~~p~~ 252 (1137)
+|+.+|. +..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..|.++++|+.|+|++|+|+++++..
T Consensus 196 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 274 (440)
T 3zyj_A 196 NLREIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDL 274 (440)
T ss_dssp CCSSCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cCccccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhH
Confidence 9999985 78999999999999999976 67899999999999999999977 556888999999999999999999988
Q ss_pred ccCCCCCCEEEccCCcCCCCCCCCcchhh
Q 001152 253 LCLMHNLQNLNLQYNKLLSYCQVPSWICC 281 (1137)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1137)
|..+++|+.|+|++|+|.|.|.+-....|
T Consensus 275 ~~~l~~L~~L~L~~Np~~CdC~l~~l~~~ 303 (440)
T 3zyj_A 275 FTPLHHLERIHLHHNPWNCNCDILWLSWW 303 (440)
T ss_dssp TSSCTTCCEEECCSSCEECSSTTHHHHHH
T ss_pred hccccCCCEEEcCCCCccCCCCchHHHHH
Confidence 99999999999999999999987655444
No 261
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=6.8e-29 Score=307.85 Aligned_cols=263 Identities=15% Similarity=0.201 Sum_probs=219.8
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCC--------------------------------------------
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTV-------------------------------------------- 53 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L-------------------------------------------- 53 (1137)
.+..|.+..|++++..+.+|.++++|++|||++|.+
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~ 161 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDL 161 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHH
Confidence 578899999999988889999999999999998843
Q ss_pred ----------------------------------CCCCcccccCCCCCCCccEEEeecCCCCc-----------------
Q 001152 54 ----------------------------------DFPLIESYGNRGGDNSVEGLYLYKNVLNL----------------- 82 (1137)
Q Consensus 54 ----------------------------------~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~----------------- 82 (1137)
++ +|..|+.+ ++|++|+|++|.|+.
T Consensus 162 ~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l---~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~ 237 (636)
T 4eco_A 162 IKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRL---TKLRQFYMGNSPFVAENICEAWENENSEYAQQ 237 (636)
T ss_dssp HHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGC---TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHH
T ss_pred HHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcc---cCCCEEECcCCccccccccccccccccchhcc
Confidence 34 56655544 899999999999987
Q ss_pred -cCcccc--CCCCCcEEEccCCCCC-cccccccCCCCCCEEEccCCC-CCC--CcccccCC------CCCCEEECCCCCC
Q 001152 83 -IPKSVG--RYEKLRNLKFFGNEIN-LFPSEVGNLLGLECLQIKISS-PGV--NGFALNKL------KGLKELELSKVPP 149 (1137)
Q Consensus 83 -IP~~~~--~L~~L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~-~~~--~~~~~~~L------~~L~~L~Ls~n~l 149 (1137)
+|..|+ ++++|++|+|++|.+. .+|..|+++++|++|+|++|. +.. +|..+..| ++|++|++++|.+
T Consensus 238 ~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l 317 (636)
T 4eco_A 238 YKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNL 317 (636)
T ss_dssp HTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCC
T ss_pred cCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcC
Confidence 999988 9999999999999876 789899999999999999997 763 77777666 8999999998654
Q ss_pred CCCcccchh--hhcCCCCCcEEeccCCCCc-ccCccccCCCCCCEEEccCCCCCccchhhcCCCC-CCEEEccCCCCCcc
Q 001152 150 RPSVLTLLS--EIAGLKCLTKLSVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKA-LISLKVANNKLVEL 225 (1137)
Q Consensus 150 n~~~~~lp~--~l~~L~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~-L~~L~Ls~N~Ls~I 225 (1137)
. .+|. .++++++|+.|++++|+++ .+| .|+.+++|++|+|++|+|+.+|..++.+++ |+.|+|++|+|+.+
T Consensus 318 ~----~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~~l 392 (636)
T 4eco_A 318 K----TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYI 392 (636)
T ss_dssp S----SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCSSC
T ss_pred C----ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCccc
Confidence 3 6777 8889999999999999998 899 888899999999999999999988999988 99999999999999
Q ss_pred CccccCCC--CCCEEeccCCcCCCCCccccc-------CCCCCCEEEccCCcCCCCCC-----CCcchhhccCCCCCC
Q 001152 226 PSGLYLLQ--RLENLDLSNNRLTSLGSLDLC-------LMHNLQNLNLQYNKLLSYCQ-----VPSWICCNLEGNGKD 289 (1137)
Q Consensus 226 P~~l~~L~--~L~~LdLS~N~Lsg~~p~~l~-------~L~~L~~L~Ls~N~L~~~~~-----iP~~~~~~l~~n~l~ 289 (1137)
|..+..+. +|+.|+|++|+|++.+|..|. .+++|+.|+|++|+|+.++. ++....+++++|.+.
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS
T ss_pred chhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC
Confidence 98877754 899999999999998887787 78899999999999886331 233334556666555
No 262
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=1.4e-27 Score=277.54 Aligned_cols=284 Identities=17% Similarity=0.148 Sum_probs=146.3
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCCCCcEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNL 96 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~-~~~L~~L~~L 96 (1137)
.++.|.+..|+|+.+.+.+|.++++|++|+|++|.|++..|..|+.+ ++|++|+|++|.|+.+|.. |.++++|++|
T Consensus 70 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 70 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV---PLLTVLVLERNDLSSLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCC---CCCCEEECCCCccCcCCHHHhcCCCCCcEE
Confidence 45556666666666666666666666666666666665555544333 5666666666666666544 3556666666
Q ss_pred EccCCCCCccc-ccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCC---------------cccchhhh
Q 001152 97 KFFGNEINLFP-SEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPS---------------VLTLLSEI 160 (1137)
Q Consensus 97 ~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~---------------~~~lp~~l 160 (1137)
+|++|.|+.++ ..+.++++|+.|+|++|.+...+ +..+++|+.|++++|.+... +..+|..
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~- 223 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP- 223 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECC-
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccCCCCcceEEECCCCeeeecccc-
Confidence 66666665443 33556666666666666544432 34444555554444332210 0000100
Q ss_pred cCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEe
Q 001152 161 AGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGLYLLQRLENLD 239 (1137)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~Ld 239 (1137)
..++|+.|++++|.++.+ ..+..+++|++|+|++|.|+.+ |..|..+++|+.|+|++|+|+.+|..+..+++|+.|+
T Consensus 224 -~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~ 301 (390)
T 3o6n_A 224 -VNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLD 301 (390)
T ss_dssp -CCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEE
T ss_pred -ccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEE
Confidence 112344444444444433 2344445555555555555433 4444555555555555555555544444455555555
Q ss_pred ccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCcccccccccccCCCc----ccCCCC
Q 001152 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPM----LENDGN 315 (1137)
Q Consensus 240 LS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~l~g~i----l~~~~~ 315 (1137)
|++|+|+++++ .+..+++|+.|+|++|+|+.+ | ....+.+...+++.|.+.+.- +..+..
T Consensus 302 L~~n~l~~~~~-~~~~l~~L~~L~L~~N~i~~~---~------------~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~ 365 (390)
T 3o6n_A 302 LSHNHLLHVER-NQPQFDRLENLYLDHNSIVTL---K------------LSTHHTLKNLTLSHNDWDCNSLRALFRNVAR 365 (390)
T ss_dssp CCSSCCCCCGG-GHHHHTTCSEEECCSSCCCCC---C------------CCTTCCCSEEECCSSCEEHHHHHHHTTTCCT
T ss_pred CCCCcceecCc-cccccCcCCEEECCCCcccee---C------------chhhccCCEEEcCCCCccchhHHHHHHHHHh
Confidence 55555554432 344455555555555554431 0 112234555666666665532 566677
Q ss_pred CcccCCCCCC
Q 001152 316 VSFSGSRHTS 325 (1137)
Q Consensus 316 ~sf~GN~~lC 325 (1137)
..+.+++..|
T Consensus 366 ~~~~~~~~~c 375 (390)
T 3o6n_A 366 PAVDDADQHC 375 (390)
T ss_dssp TTBCCCCSCC
T ss_pred hcccccCcee
Confidence 7778888888
No 263
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.95 E-value=1.5e-27 Score=292.67 Aligned_cols=128 Identities=16% Similarity=0.139 Sum_probs=74.0
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCcEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNL 96 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~~L 96 (1137)
.+..|.+..|+|+.+.+.+|.++++|++|||++|+|++..|..|+.+ ++|++|+|++|.++.+ |..|+++++|++|
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l---~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 109 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGL---HHLSNLILTGNPIQSFSPGSFSGLTSLENL 109 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC---TTCCEEECTTCCCCCCCTTSSTTCTTCCEE
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhch---hhcCEeECCCCcccccChhhcCCcccCCEE
Confidence 45666666666666666666666666666666666665555544333 5666666666666654 4456666666666
Q ss_pred EccCCCCCccc-ccccCCCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCC
Q 001152 97 KFFGNEINLFP-SEVGNLLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVP 148 (1137)
Q Consensus 97 ~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~~~~--~~~~~~~L~~L~~L~Ls~n~ 148 (1137)
+|++|.|+.+| ..++++++|++|+|++|.+.. +|..+.++++|++|++++|.
T Consensus 110 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp ECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred EccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 66666665543 345555666666665555442 34555555555555555543
No 264
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.7e-27 Score=292.92 Aligned_cols=280 Identities=18% Similarity=0.170 Sum_probs=156.8
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCCCCcEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNL 96 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~-~~~L~~L~~L 96 (1137)
.+..|.+..|.|+.+.+.+|.++++|++|+|++|.|++.+|..|+.+ ++|++|+|++|.|+.+|.. |+++++|++|
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV---PLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCC---CCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 46666666666666666666666666666666666666665544433 6666666666666666554 4666666666
Q ss_pred EccCCCCCccc-ccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCC
Q 001152 97 KFFGNEINLFP-SEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1137)
Q Consensus 97 ~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1137)
+|++|.|+.+| ..|+++++|+.|+|++|.+..++ +..+++|+.|++++|.+.. +....+|+.|++++|.
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~--------l~~~~~L~~L~ls~n~ 222 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLST--------LAIPIAVEELDASHNS 222 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSE--------EECCTTCSEEECCSSC
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCcccc--------ccCCchhheeeccCCc
Confidence 66666666443 34666666666666666654443 3445555555555543321 1122334444444444
Q ss_pred CcccC--------------------ccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCccccCCCC
Q 001152 176 IRYLP--------------------PEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGLYLLQR 234 (1137)
Q Consensus 176 L~~IP--------------------~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~ 234 (1137)
++.+| ..++.+++|+.|+|++|.|+.+ |..|+.+++|+.|+|++|.|+.+|..+..+++
T Consensus 223 l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~ 302 (597)
T 3oja_B 223 INVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPT 302 (597)
T ss_dssp CCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTT
T ss_pred ccccccccCCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCC
Confidence 44333 3344555555555555555532 44455555555555555555555554544555
Q ss_pred CCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCcccccccccccCCCc----c
Q 001152 235 LENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPM----L 310 (1137)
Q Consensus 235 L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~l~g~i----l 310 (1137)
|+.|+|++|.|+++++ .+..+++|+.|+|++|+|+++ | ....+.+...++++|.+.+.. +
T Consensus 303 L~~L~Ls~N~l~~i~~-~~~~l~~L~~L~L~~N~l~~~---~------------~~~~~~L~~L~l~~N~~~~~~~~~~~ 366 (597)
T 3oja_B 303 LKVLDLSHNHLLHVER-NQPQFDRLENLYLDHNSIVTL---K------------LSTHHTLKNLTLSHNDWDCNSLRALF 366 (597)
T ss_dssp CCEEECCSSCCCCCGG-GHHHHTTCSEEECCSSCCCCC---C------------CCTTCCCSEEECCSSCEEHHHHHHHT
T ss_pred CcEEECCCCCCCccCc-ccccCCCCCEEECCCCCCCCc---C------------hhhcCCCCEEEeeCCCCCChhHHHHH
Confidence 5555555555554432 444555555555555555441 1 112345666777777777643 6
Q ss_pred cCCCCCcccCCCCCCc
Q 001152 311 ENDGNVSFSGSRHTSS 326 (1137)
Q Consensus 311 ~~~~~~sf~GN~~lC~ 326 (1137)
..+....+.+++.+|.
T Consensus 367 ~~~~~~~~~~~~~~C~ 382 (597)
T 3oja_B 367 RNVARPAVDDADQHCK 382 (597)
T ss_dssp TTCCTTTBCCCCCCCC
T ss_pred HHHhhhccccccccCC
Confidence 7777888889999993
No 265
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2.1e-27 Score=282.09 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=221.2
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCCCCcEEE
Q 001152 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLK 97 (1137)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP-~~~~~L~~L~~L~ 97 (1137)
...+....+.++.++.+.. ++|++|+|++|+|++..+..|..+ ++|+.|+|++|.|+.++ ..|.++++|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 129 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP---SNTRYLNLMENNIQMIQADTFRHL---HHLEVLQLGRNSIRQIEVGAFNGLASLNTLE 129 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC---TTCSEEECCSSCCCEECTTTTTTC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcEEEECCCCcCccCCCCC---CCccEEECcCCcCceECHHHcCCC---CCCCEEECCCCccCCcChhhccCcccCCEEE
Confidence 4567777888888875433 689999999999999988877655 99999999999999885 6799999999999
Q ss_pred ccCCCCCccccc-ccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchh-hhcCCCCCcEEeccCC
Q 001152 98 FFGNEINLFPSE-VGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLS-EIAGLKCLTKLSVCHF 174 (1137)
Q Consensus 98 Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~-~l~~L~~L~~L~Ls~N 174 (1137)
|++|+|+.+|.. |.++++|++|+|++|.+..++ ..|.++++|+.|++++| +....++. .|.++++|++|+|++|
T Consensus 130 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~---~~l~~i~~~~~~~l~~L~~L~L~~n 206 (452)
T 3zyi_A 130 LFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL---KKLEYISEGAFEGLFNLKYLNLGMC 206 (452)
T ss_dssp CCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC---TTCCEECTTTTTTCTTCCEEECTTS
T ss_pred CCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC---CCccccChhhccCCCCCCEEECCCC
Confidence 999999988765 889999999999999988766 47899999999999983 33444544 5889999999999999
Q ss_pred CCcccCccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeccCCcCCCCCccc
Q 001152 175 SIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLD 252 (1137)
Q Consensus 175 ~L~~IP~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~LdLS~N~Lsg~~p~~ 252 (1137)
+|+.+|. +..+++|+.|+|++|+|+.+ |..|.++++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++..
T Consensus 207 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 285 (452)
T 3zyi_A 207 NIKDMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDL 285 (452)
T ss_dssp CCSSCCC-CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTS
T ss_pred ccccccc-ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHH
Confidence 9999975 78999999999999999966 77899999999999999999966 567888999999999999999999988
Q ss_pred ccCCCCCCEEEccCCcCCCCCCCCcchh
Q 001152 253 LCLMHNLQNLNLQYNKLLSYCQVPSWIC 280 (1137)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1137)
|..+++|+.|+|++|+|.|.|.+-....
T Consensus 286 ~~~l~~L~~L~L~~Np~~CdC~~~~l~~ 313 (452)
T 3zyi_A 286 FTPLRYLVELHLHHNPWNCDCDILWLAW 313 (452)
T ss_dssp STTCTTCCEEECCSSCEECSTTTHHHHH
T ss_pred hccccCCCEEEccCCCcCCCCCchHHHH
Confidence 9999999999999999999998764433
No 266
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=1.4e-27 Score=291.19 Aligned_cols=299 Identities=18% Similarity=0.128 Sum_probs=215.8
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L 96 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.||.. .+++|++|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~lp~~--~l~~L~~L 126 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFN---QDLEYLDVSHNRLQNISCC--PMASLRHL 126 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTC---TTCCEEECTTSCCCEECSC--CCTTCSEE
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCC---CCCCEEECCCCcCCccCcc--ccccCCEE
Confidence 579999999999999999999999999999999999998888776554 8999999999999999877 78999999
Q ss_pred EccCCCCCcc--cccccCCCCCCEEEccCCCCCCCcccccCCCCC--CEEECCCCCC--CCCcccchhhhcC--------
Q 001152 97 KFFGNEINLF--PSEVGNLLGLECLQIKISSPGVNGFALNKLKGL--KELELSKVPP--RPSVLTLLSEIAG-------- 162 (1137)
Q Consensus 97 ~Ls~N~L~~l--P~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L--~~L~Ls~n~l--n~~~~~lp~~l~~-------- 162 (1137)
+|++|+|+.+ |..|+++++|++|+|++|.+.. ..+..+++| +.|++++|.+ ... .|..+..
T Consensus 127 ~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~L~~n~l~~~~~---~~~~l~~l~~~~l~l 201 (562)
T 3a79_B 127 DLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ--LDLLPVAHLHLSCILLDLVSYHIKGG---ETESLQIPNTTVLHL 201 (562)
T ss_dssp ECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT--TTTGGGTTSCEEEEEEEESSCCCCSS---SCCEEEECCEEEEEE
T ss_pred ECCCCCccccCchHhhcccCcccEEecCCCcccc--CchhhhhhceeeEEEeeccccccccc---CcccccccCcceEEE
Confidence 9999999865 4789999999999999988654 235555555 7777777655 111 1111111
Q ss_pred -------------------------------------------------------------------------CCCCcEE
Q 001152 163 -------------------------------------------------------------------------LKCLTKL 169 (1137)
Q Consensus 163 -------------------------------------------------------------------------L~~L~~L 169 (1137)
..+|++|
T Consensus 202 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L 281 (562)
T 3a79_B 202 VFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYL 281 (562)
T ss_dssp EECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEE
T ss_pred EecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEE
Confidence 1145556
Q ss_pred eccCCCCc-ccCccc-----------------------------------------------------cCCCCCCEEEcc
Q 001152 170 SVCHFSIR-YLPPEI-----------------------------------------------------GCLSNLEQLDLS 195 (1137)
Q Consensus 170 ~Ls~N~L~-~IP~~l-----------------------------------------------------~~L~~L~~L~Ls 195 (1137)
++++|.++ .+|..+ ..+++|++|+|+
T Consensus 282 ~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~ 361 (562)
T 3a79_B 282 NIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFT 361 (562)
T ss_dssp EEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECC
T ss_pred EEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECC
Confidence 66666655 555543 566778888888
Q ss_pred CCCCCc-cchhhcCCCCCCEEEccCCCCCccC---ccccCCCCCCEEeccCCcCCC-CCcccccCCCCCCEEEccCCcCC
Q 001152 196 FNKMKY-LPTEICYLKALISLKVANNKLVELP---SGLYLLQRLENLDLSNNRLTS-LGSLDLCLMHNLQNLNLQYNKLL 270 (1137)
Q Consensus 196 ~N~L~~-LP~~l~~L~~L~~L~Ls~N~Ls~IP---~~l~~L~~L~~LdLS~N~Lsg-~~p~~l~~L~~L~~L~Ls~N~L~ 270 (1137)
+|+++. +|..++++++|+.|+|++|+|+.+| ..+..+++|+.|+|++|++++ +++..+..+++|+.|+|++|+|+
T Consensus 362 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 441 (562)
T 3a79_B 362 QNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLT 441 (562)
T ss_dssp SSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCC
T ss_pred CCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCC
Confidence 888874 6777788888888888888887554 457778888888888888887 55555777788888888888876
Q ss_pred CC--CCC-CcchhhccCCCCCCCCC------CCcccccccccccCCCc------ccCCCCCcccCCCCCC
Q 001152 271 SY--CQV-PSWICCNLEGNGKDSSN------DDFISSSAEMDVYEGPM------LENDGNVSFSGSRHTS 325 (1137)
Q Consensus 271 ~~--~~i-P~~~~~~l~~n~l~~~~------~~l~~~~~s~n~l~g~i------l~~~~~~sf~GN~~lC 325 (1137)
+. ..+ +....+++++|.+..-+ +.+...++++|.+..-. +..+....++||+..|
T Consensus 442 ~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 442 GSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp GGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred cchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCC
Confidence 51 123 23444667777655432 34566677777776421 2334455678999998
No 267
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.1e-27 Score=273.30 Aligned_cols=224 Identities=19% Similarity=0.175 Sum_probs=197.4
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEE
Q 001152 40 DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECL 119 (1137)
Q Consensus 40 l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L 119 (1137)
...++.|+|++|+|+ .+|..++. +++|++|+|++|.|+.+|..|+++++|++|+|++|.|+.+|..++++++|++|
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~---l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFR---LSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIASLNRLREL 155 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGG---GTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEE
T ss_pred ccceeEEEccCCCch-hcChhhhh---CCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEE
Confidence 478999999999998 45554544 48999999999999999999999999999999999999999999999999999
Q ss_pred EccCCC-CCCCccccc---------CCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCC
Q 001152 120 QIKISS-PGVNGFALN---------KLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNL 189 (1137)
Q Consensus 120 ~Ls~N~-~~~~~~~~~---------~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L 189 (1137)
+|++|+ .+.+|..+. ++++|++|+|++|.+. .+|..+..+++|+.|++++|+++.+|..++.+++|
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~----~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L 231 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR----SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKL 231 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC----CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTC
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC----cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCC
Confidence 999865 677776654 4999999999986554 67788899999999999999999999989999999
Q ss_pred CEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCC
Q 001152 190 EQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1137)
Q Consensus 190 ~~L~Ls~N~L~-~LP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N 267 (1137)
++|+|++|++. .+|..++.+++|+.|+|++|.+. .+|..+.++++|+.|+|++|++.+.+|..+.+|++|+.+++..|
T Consensus 232 ~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 232 EELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp CEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred CEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 99999998776 78888999999999999998765 88989999999999999999999988989999999999999988
Q ss_pred cCCC
Q 001152 268 KLLS 271 (1137)
Q Consensus 268 ~L~~ 271 (1137)
.+..
T Consensus 312 ~~~~ 315 (328)
T 4fcg_A 312 LQAQ 315 (328)
T ss_dssp GSCC
T ss_pred HHHH
Confidence 7765
No 268
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=9.4e-28 Score=290.74 Aligned_cols=303 Identities=18% Similarity=0.186 Sum_probs=177.0
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCCCCcE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRN 95 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~-~~~L~~L~~ 95 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.++.+|+. |+++++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 102 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSL---GSLEHLDLSDNHLSSLSSSWFGPLSSLKY 102 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTC---TTCCEEECTTSCCCSCCHHHHTTCTTCCE
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccc---ccCCEEECCCCccCccCHHHhccCCCCcE
Confidence 457777777777777777777777777777777777777666555433 6777777777777766543 777777777
Q ss_pred EEccCCCCCc--ccccccCCCCCCEEEccCCC-CCCCc-ccccCC-----------------------------------
Q 001152 96 LKFFGNEINL--FPSEVGNLLGLECLQIKISS-PGVNG-FALNKL----------------------------------- 136 (1137)
Q Consensus 96 L~Ls~N~L~~--lP~~l~~L~~L~~L~Ls~N~-~~~~~-~~~~~L----------------------------------- 136 (1137)
|+|++|.|+. +|..++++++|++|+|++|. ++.++ ..+.++
T Consensus 103 L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 103 LNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp EECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred EECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccC
Confidence 7777777763 35566666677777666665 33333 233333
Q ss_pred -------------CCCCEEECCCCCCCCCc--------------------------------------------------
Q 001152 137 -------------KGLKELELSKVPPRPSV-------------------------------------------------- 153 (1137)
Q Consensus 137 -------------~~L~~L~Ls~n~ln~~~-------------------------------------------------- 153 (1137)
++|++|++++|.+....
T Consensus 183 ~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~ 262 (549)
T 2z81_A 183 ESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCT 262 (549)
T ss_dssp BSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCE
T ss_pred cccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccc
Confidence 34444444444332210
Q ss_pred ------------------------------------------------------------ccchhhh-cCCCCCcEEecc
Q 001152 154 ------------------------------------------------------------LTLLSEI-AGLKCLTKLSVC 172 (1137)
Q Consensus 154 ------------------------------------------------------------~~lp~~l-~~L~~L~~L~Ls 172 (1137)
..+|..+ ..+++|+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls 342 (549)
T 2z81_A 263 LNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLS 342 (549)
T ss_dssp EECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECC
T ss_pred ccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEcc
Confidence 0011122 234555555555
Q ss_pred CCCCcc-cCc---cccCCCCCCEEEccCCCCCccc---hhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcC
Q 001152 173 HFSIRY-LPP---EIGCLSNLEQLDLSFNKMKYLP---TEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRL 245 (1137)
Q Consensus 173 ~N~L~~-IP~---~l~~L~~L~~L~Ls~N~L~~LP---~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~L 245 (1137)
+|+++. +|. .++.+++|++|+|++|+|+.+| ..+..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+|
T Consensus 343 ~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l 422 (549)
T 2z81_A 343 ENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGI 422 (549)
T ss_dssp SSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCC
T ss_pred CCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCc
Confidence 555552 221 2445555555555555555544 235556666666666666666666565566666666666666
Q ss_pred CCCCcccccCCCCCCEEEccCCcCCCCC-CCCcchhhccCCCCCCCC-----CCCcccccccccccCCCc------ccCC
Q 001152 246 TSLGSLDLCLMHNLQNLNLQYNKLLSYC-QVPSWICCNLEGNGKDSS-----NDDFISSSAEMDVYEGPM------LEND 313 (1137)
Q Consensus 246 sg~~p~~l~~L~~L~~L~Ls~N~L~~~~-~iP~~~~~~l~~n~l~~~-----~~~l~~~~~s~n~l~g~i------l~~~ 313 (1137)
+.++.. + .++|+.|+|++|+|+++. .+|....+++++|.+..- .+.+...++++|.+.+.+ +..+
T Consensus 423 ~~l~~~-~--~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 499 (549)
T 2z81_A 423 RVVKTC-I--PQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSL 499 (549)
T ss_dssp SCCCTT-S--CTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTC
T ss_pred ccccch-h--cCCceEEECCCCChhhhcccCChhcEEECCCCccCcCCCcccCccCCEEecCCCccCCcCHHHHhcCccc
Confidence 554331 1 145556666666555532 345555566777766532 235666778888888754 2344
Q ss_pred CCCcccCCCCCC
Q 001152 314 GNVSFSGSRHTS 325 (1137)
Q Consensus 314 ~~~sf~GN~~lC 325 (1137)
....++||+..|
T Consensus 500 ~~L~l~~N~~~~ 511 (549)
T 2z81_A 500 QKIWLHTNPWDC 511 (549)
T ss_dssp CEEECCSSCBCC
T ss_pred CEEEecCCCccC
Confidence 555778999888
No 269
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=7.1e-28 Score=290.29 Aligned_cols=301 Identities=17% Similarity=0.111 Sum_probs=210.9
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L 96 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|+|+.||.. .+++|++|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~lp~~--~l~~L~~L 95 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFN---QELEYLDLSHNKLVKISCH--PTVNLKHL 95 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTC---TTCCEEECCSSCCCEEECC--CCCCCSEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcc---cCCCEEecCCCceeecCcc--ccCCccEE
Confidence 589999999999999999999999999999999999999888877655 9999999999999999887 89999999
Q ss_pred EccCCCCCc--ccccccCCCCCCEEEccCCCCCCCcccccCCCCC--CEEECCCCCCCCCcccchhhhcC----------
Q 001152 97 KFFGNEINL--FPSEVGNLLGLECLQIKISSPGVNGFALNKLKGL--KELELSKVPPRPSVLTLLSEIAG---------- 162 (1137)
Q Consensus 97 ~Ls~N~L~~--lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L--~~L~Ls~n~ln~~~~~lp~~l~~---------- 162 (1137)
+|++|.|+. +|..|+++++|++|+|++|.+.. ..+..+++| +.|++++|.+.. .+..|..+..
T Consensus 96 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~l~~n~l~~-~~~~~~~l~~l~~~~l~l~l 172 (520)
T 2z7x_B 96 DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--SSVLPIAHLNISKVLLVLGETYG-EKEDPEGLQDFNTESLHIVF 172 (520)
T ss_dssp ECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--GGGGGGTTSCEEEEEEEECTTTT-SSCCTTTTTTCCEEEEEEEC
T ss_pred eccCCccccccchhhhccCCcceEEEecCcccch--hhccccccceeeEEEeecccccc-cccccccccccccceEEEEe
Confidence 999999985 67899999999999999988654 345566666 666666654400 0011111111
Q ss_pred -------------------------------------------------------------------------CCCCcEE
Q 001152 163 -------------------------------------------------------------------------LKCLTKL 169 (1137)
Q Consensus 163 -------------------------------------------------------------------------L~~L~~L 169 (1137)
+++|++|
T Consensus 173 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp CSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred ccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 1134444
Q ss_pred eccCCCCc-ccCccc-----------------------------------------------------cCCCCCCEEEcc
Q 001152 170 SVCHFSIR-YLPPEI-----------------------------------------------------GCLSNLEQLDLS 195 (1137)
Q Consensus 170 ~Ls~N~L~-~IP~~l-----------------------------------------------------~~L~~L~~L~Ls 195 (1137)
++++|+++ .+|..+ ..+++|++|+|+
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls 332 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFS 332 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECC
T ss_pred EeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeE
Confidence 44444444 344333 466677777777
Q ss_pred CCCCCc-cchhhcCCCCCCEEEccCCCCCc---cCccccCCCCCCEEeccCCcCCC-CCcccccCCCCCCEEEccCCcCC
Q 001152 196 FNKMKY-LPTEICYLKALISLKVANNKLVE---LPSGLYLLQRLENLDLSNNRLTS-LGSLDLCLMHNLQNLNLQYNKLL 270 (1137)
Q Consensus 196 ~N~L~~-LP~~l~~L~~L~~L~Ls~N~Ls~---IP~~l~~L~~L~~LdLS~N~Lsg-~~p~~l~~L~~L~~L~Ls~N~L~ 270 (1137)
+|+++. +|..++.+++|+.|+|++|+++. +|..+..+++|+.|+|++|++++ +++..+..+++|+.|+|++|+++
T Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~ 412 (520)
T 2z7x_B 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT 412 (520)
T ss_dssp SSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCC
T ss_pred CCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCC
Confidence 777774 67777777777777777777774 34567777777777777777777 44444677777777777777775
Q ss_pred CC--CCC-CcchhhccCCCCCCCCC------CCcccccccccccCCCc------ccCCCCCcccCCCCCC
Q 001152 271 SY--CQV-PSWICCNLEGNGKDSSN------DDFISSSAEMDVYEGPM------LENDGNVSFSGSRHTS 325 (1137)
Q Consensus 271 ~~--~~i-P~~~~~~l~~n~l~~~~------~~l~~~~~s~n~l~g~i------l~~~~~~sf~GN~~lC 325 (1137)
+. ..+ +....+++++|.+..-+ +.+...++++|.+..-. +.++....++||+..|
T Consensus 413 ~~~~~~l~~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 413 DTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp GGGGGSCCTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cchhhhhcccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcc
Confidence 41 122 23334566666655322 24555666777666321 2334445677999888
No 270
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=3e-28 Score=302.06 Aligned_cols=246 Identities=17% Similarity=0.193 Sum_probs=171.4
Q ss_pred CCcccccCCCCCCccc-----------------CCCCCC--CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeec
Q 001152 17 PIKEKLPSEANKINNE-----------------KNGSVN--DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYK 77 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l-----------------~~~~f~--~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~ 77 (1137)
+.++.|.+..|+|++. .|..+. ++++|++|+|++|++.+.+|..|+.+ ++|++|+|++
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l---~~L~~L~Ls~ 282 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL---PEMQLINVAC 282 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC---SSCCEEECTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC---CCCCEEECcC
Confidence 4688888889999884 567777 89999999999999998888766554 8889999999
Q ss_pred CC-CC--ccCccccCC------CCCcEEEccCCCCCcccc--cccCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECC
Q 001152 78 NV-LN--LIPKSVGRY------EKLRNLKFFGNEINLFPS--EVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELS 145 (1137)
Q Consensus 78 N~-L~--~IP~~~~~L------~~L~~L~Ls~N~L~~lP~--~l~~L~~L~~L~Ls~N~~~-~~~~~~~~L~~L~~L~Ls 145 (1137)
|+ ++ .+|..+++| ++|++|+|++|+|+.+|. .++++++|+.|+|++|.+. .+| .+..+++|+.|+++
T Consensus 283 n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~ 361 (636)
T 4eco_A 283 NRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLA 361 (636)
T ss_dssp CTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECC
T ss_pred CCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECC
Confidence 87 87 488888776 888999999998888888 8888888888888888877 677 77778888888888
Q ss_pred CCCCCCCcccchhhhcCCCC-CcEEeccCCCCcccCccccCCC--CCCEEEccCCCCC-ccchhhc-------CCCCCCE
Q 001152 146 KVPPRPSVLTLLSEIAGLKC-LTKLSVCHFSIRYLPPEIGCLS--NLEQLDLSFNKMK-YLPTEIC-------YLKALIS 214 (1137)
Q Consensus 146 ~n~ln~~~~~lp~~l~~L~~-L~~L~Ls~N~L~~IP~~l~~L~--~L~~L~Ls~N~L~-~LP~~l~-------~L~~L~~ 214 (1137)
+|.+ ..+|..+..+++ |+.|++++|.++.+|..+..++ +|++|+|++|+|+ .+|..|. .+++|+.
T Consensus 362 ~N~l----~~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~ 437 (636)
T 4eco_A 362 YNQI----TEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSS 437 (636)
T ss_dssp SSEE----EECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEE
T ss_pred CCcc----ccccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCE
Confidence 7443 266777777777 7777777777777777655443 5666666666655 3444444 4455555
Q ss_pred EEccCCCCCccCcccc-CCCCCCEEeccCCcCCCCCcccccCCC-------CCCEEEccCCcCC
Q 001152 215 LKVANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGSLDLCLMH-------NLQNLNLQYNKLL 270 (1137)
Q Consensus 215 L~Ls~N~Ls~IP~~l~-~L~~L~~LdLS~N~Lsg~~p~~l~~L~-------~L~~L~Ls~N~L~ 270 (1137)
|+|++|+|+.+|..++ .+++|+.|+|++|+|+.+++..+..+. +|+.|+|++|+|+
T Consensus 438 L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 501 (636)
T 4eco_A 438 INLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT 501 (636)
T ss_dssp EECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC
T ss_pred EECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC
Confidence 5555555555554433 255555555555555544433322221 4555555555554
No 271
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.95 E-value=1.6e-27 Score=284.35 Aligned_cols=249 Identities=18% Similarity=0.208 Sum_probs=194.6
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCcE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRN 95 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~~ 95 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|+|++|+|++..+..|.. +++|++|+|++|.++.+ |..|.++++|++
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 132 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTG---LSNLTKLDISENKIVILLDYMFQDLYNLKS 132 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTT---CTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccC---CCCCCEEECCCCccccCChhHccccccCCE
Confidence 47999999999999999999999999999999999999887766654 48999999999999866 567899999999
Q ss_pred EEccCCCCCcc-cccccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccC
Q 001152 96 LKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1137)
Q Consensus 96 L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1137)
|+|++|.|+.+ |..|.++++|+.|+|++|.+..++ ..+..+++|+.|+|++|.+.. ..+..+..+++|+.|++++
T Consensus 133 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~---~~~~~~~~l~~L~~L~l~~ 209 (477)
T 2id5_A 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA---IRDYSFKRLYRLKVLEISH 209 (477)
T ss_dssp EEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE---ECTTCSCSCTTCCEEEEEC
T ss_pred EECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE---eChhhcccCcccceeeCCC
Confidence 99999999866 557889999999999999877666 458888999999998865533 2334567777777777777
Q ss_pred CCCc-ccCccccCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeccCCcCCCCCc
Q 001152 174 FSIR-YLPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGS 250 (1137)
Q Consensus 174 N~L~-~IP~~l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdLS~N~Lsg~~p 250 (1137)
|.+. .+|..+....+|+.|+|++|+|+.+| ..+..+++|+.|+|++|.|+.+|. .+..+++|+.|+|++|+|++++|
T Consensus 210 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (477)
T 2id5_A 210 WPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 289 (477)
T ss_dssp CTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECT
T ss_pred CccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECH
Confidence 6544 66665555567777777777777776 356677777777777777776543 46667777777777777777777
Q ss_pred ccccCCCCCCEEEccCCcCCC
Q 001152 251 LDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 251 ~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
..|..+++|+.|+|++|+|+.
T Consensus 290 ~~~~~l~~L~~L~L~~N~l~~ 310 (477)
T 2id5_A 290 YAFRGLNYLRVLNVSGNQLTT 310 (477)
T ss_dssp TTBTTCTTCCEEECCSSCCSC
T ss_pred HHhcCcccCCEEECCCCcCce
Confidence 777777777777777777765
No 272
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=1.2e-27 Score=304.77 Aligned_cols=249 Identities=16% Similarity=0.176 Sum_probs=186.6
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCC-CCC-CCcccccCC----CCCCCccEEEeecCCCCccCc--ccc
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT-VDF-PLIESYGNR----GGDNSVEGLYLYKNVLNLIPK--SVG 88 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~-L~~-~~p~~~~~l----~~L~~L~~L~Ls~N~L~~IP~--~~~ 88 (1137)
+.++.|.+..|++....|..|.++++|++|+|++|+ |++ .+|..++.+ ..+++|+.|+|++|.|+.||. .|+
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~ 570 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQ 570 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHT
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhh
Confidence 478999999999988889999999999999999998 998 788766543 455699999999999999998 899
Q ss_pred CCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCC-CCEEECCCCCCCCCcccchhhhcCCCC--
Q 001152 89 RYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKG-LKELELSKVPPRPSVLTLLSEIAGLKC-- 165 (1137)
Q Consensus 89 ~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~-L~~L~Ls~n~ln~~~~~lp~~l~~L~~-- 165 (1137)
++++|+.|+|++|.|+.|| .|+++++|+.|+|++|.+..+|..+..+++ |+.|+|++|.+. .+|..+..+..
T Consensus 571 ~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~----~lp~~~~~~~~~~ 645 (876)
T 4ecn_A 571 KMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK----YIPNIFNAKSVYV 645 (876)
T ss_dssp TCTTCCEEECTTSCCCBCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC----SCCSCCCTTCSSC
T ss_pred cCCCCCEEECCCCCcccch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC----cCchhhhccccCC
Confidence 9999999999999999999 899999999999999998888888999998 999999997654 45555554433
Q ss_pred CcEEeccCCCCcccCc----ccc--CCCCCCEEEccCCCCCccchhhc-CCCCCCEEEccCCCCCccCccccCCC-----
Q 001152 166 LTKLSVCHFSIRYLPP----EIG--CLSNLEQLDLSFNKMKYLPTEIC-YLKALISLKVANNKLVELPSGLYLLQ----- 233 (1137)
Q Consensus 166 L~~L~Ls~N~L~~IP~----~l~--~L~~L~~L~Ls~N~L~~LP~~l~-~L~~L~~L~Ls~N~Ls~IP~~l~~L~----- 233 (1137)
|+.|++++|+|+..++ .+. .+++|+.|+|++|+|+.+|..+. .+++|+.|+|++|+|+.||..++...
T Consensus 646 L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~ 725 (876)
T 4ecn_A 646 MGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYK 725 (876)
T ss_dssp EEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCT
T ss_pred CCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcccccccc
Confidence 6677777776653222 222 23366666666666666665553 56666666666666666666544322
Q ss_pred ---CCCEEeccCCcCCCCCccccc--CCCCCCEEEccCCcCCC
Q 001152 234 ---RLENLDLSNNRLTSLGSLDLC--LMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 234 ---~L~~LdLS~N~Lsg~~p~~l~--~L~~L~~L~Ls~N~L~~ 271 (1137)
+|+.|+|++|+|+.++ ..+. .+++|+.|+|++|+|++
T Consensus 726 nl~~L~~L~Ls~N~L~~lp-~~l~~~~l~~L~~L~Ls~N~L~~ 767 (876)
T 4ecn_A 726 NTYLLTTIDLRFNKLTSLS-DDFRATTLPYLSNMDVSYNCFSS 767 (876)
T ss_dssp TGGGCCEEECCSSCCCCCC-GGGSTTTCTTCCEEECCSSCCSS
T ss_pred ccCCccEEECCCCCCccch-HHhhhccCCCcCEEEeCCCCCCc
Confidence 6666666666666443 3444 66666666666666665
No 273
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=5.1e-27 Score=287.40 Aligned_cols=131 Identities=16% Similarity=0.109 Sum_probs=115.3
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCc
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLR 94 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~ 94 (1137)
|+.++.|++..|+|+.+.+.+|.++++|++|||++|+|+++.+.+|.++ ++|++|+|++|+|+.+|. .|.+|++|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L---~~L~~L~Ls~N~l~~l~~~~f~~L~~L~ 127 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSL---SHLSTLILTGNPIQSLALGAFSGLSSLQ 127 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC---TTCCEEECTTCCCCEECGGGGTTCTTCC
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCC---CCCCEEEccCCcCCCCCHHHhcCCCCCC
Confidence 4579999999999999999999999999999999999999888777555 999999999999999985 589999999
Q ss_pred EEEccCCCCCcccc-cccCCCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCC
Q 001152 95 NLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPP 149 (1137)
Q Consensus 95 ~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~~~~--~~~~~~~L~~L~~L~Ls~n~l 149 (1137)
+|+|++|+|+.+|. .|++|++|++|+|++|.+.. .|..+..+++|++|++++|.+
T Consensus 128 ~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 128 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp EEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred EEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 99999999998876 48999999999999998764 456788899999998887653
No 274
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=4.3e-27 Score=288.62 Aligned_cols=267 Identities=18% Similarity=0.165 Sum_probs=218.1
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCc
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLR 94 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~ 94 (1137)
++.++.|.+..|+|+.+.+.+|.++++|++|||++|+|++..|..|+.+ ++|++|+|++|.++.+ |..|+++++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 108 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQ---HRLDTLVLTANPLIFMAETALSGPKALK 108 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTC---TTCCEEECTTCCCSEECTTTTSSCTTCC
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCc---cccCeeeCCCCcccccChhhhccccccc
Confidence 4579999999999999999999999999999999999999888877655 9999999999999976 67899999999
Q ss_pred EEEccCCCCCcc-cccccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc--EEe
Q 001152 95 NLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT--KLS 170 (1137)
Q Consensus 95 ~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~--~L~ 170 (1137)
+|+|++|.|+.+ |..++++++|++|+|++|.+..++ ..+..+++|+.|++++|.+. ...|..+..+++|+ .|+
T Consensus 109 ~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~~~~l~~L~~l~L~ 185 (606)
T 3t6q_A 109 HLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH---YLSKEDMSSLQQATNLSLN 185 (606)
T ss_dssp EEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC---EECHHHHHTTTTCCSEEEE
T ss_pred EeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc---ccChhhhhhhcccceeEEe
Confidence 999999999988 677999999999999999987753 45556999999999996553 34466788888888 889
Q ss_pred ccCCCCcccCccccCCC----------------------------------------------------CCCEEEccCCC
Q 001152 171 VCHFSIRYLPPEIGCLS----------------------------------------------------NLEQLDLSFNK 198 (1137)
Q Consensus 171 Ls~N~L~~IP~~l~~L~----------------------------------------------------~L~~L~Ls~N~ 198 (1137)
+++|.++.+++...... +|+.|+|++|.
T Consensus 186 l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~ 265 (606)
T 3t6q_A 186 LNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHY 265 (606)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCC
T ss_pred cCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCc
Confidence 99999886655322211 56778888888
Q ss_pred CCccchh-hcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC------
Q 001152 199 MKYLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS------ 271 (1137)
Q Consensus 199 L~~LP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~------ 271 (1137)
++.+|.. |..+++|+.|+|++|+++.+|..+..+++|+.|+|++|++++++|..+..+++|+.|++++|.+.+
T Consensus 266 l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (606)
T 3t6q_A 266 FFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGC 345 (606)
T ss_dssp CSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSST
T ss_pred cCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhh
Confidence 8877644 788888888888888888888888888888888888888888888788888888888888888764
Q ss_pred CCCCCcchhhccCCCCC
Q 001152 272 YCQVPSWICCNLEGNGK 288 (1137)
Q Consensus 272 ~~~iP~~~~~~l~~n~l 288 (1137)
+..++....+++++|.+
T Consensus 346 ~~~l~~L~~L~l~~n~l 362 (606)
T 3t6q_A 346 LENLENLRELDLSHDDI 362 (606)
T ss_dssp TTTCTTCCEEECCSSCC
T ss_pred hhccCcCCEEECCCCcc
Confidence 22333344445555544
No 275
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=2.2e-27 Score=302.28 Aligned_cols=266 Identities=17% Similarity=0.183 Sum_probs=225.5
Q ss_pred CCcccccCCCCCCccc-----------------CCCCCC--CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeec
Q 001152 17 PIKEKLPSEANKINNE-----------------KNGSVN--DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYK 77 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l-----------------~~~~f~--~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~ 77 (1137)
+.++.|.+..|+|++. .|..+. ++++|++|+|++|++.+.+|..|+.+ ++|+.|+|++
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L---~~L~~L~Ls~ 524 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL---PELQSLNIAC 524 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC---SSCCEEECTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC---CCCCEEECcC
Confidence 4789999999999992 456666 99999999999999999999888766 9999999999
Q ss_pred CC-CC--ccCccccCCC-------CCcEEEccCCCCCcccc--cccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECC
Q 001152 78 NV-LN--LIPKSVGRYE-------KLRNLKFFGNEINLFPS--EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELS 145 (1137)
Q Consensus 78 N~-L~--~IP~~~~~L~-------~L~~L~Ls~N~L~~lP~--~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls 145 (1137)
|+ |+ .+|..|++++ +|++|+|++|+|+.||. .|+++++|+.|+|++|.+..+| .+..+++|+.|+|+
T Consensus 525 N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 525 NRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp CTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCCBCC-CCCTTSEESEEECC
T ss_pred CCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEECCCCCcccch-hhcCCCcceEEECc
Confidence 98 88 4898777666 99999999999999999 8999999999999999988888 89999999999999
Q ss_pred CCCCCCCcccchhhhcCCCC-CcEEeccCCCCcccCccccCCCC--CCEEEccCCCCCcc-c---hhhc--CCCCCCEEE
Q 001152 146 KVPPRPSVLTLLSEIAGLKC-LTKLSVCHFSIRYLPPEIGCLSN--LEQLDLSFNKMKYL-P---TEIC--YLKALISLK 216 (1137)
Q Consensus 146 ~n~ln~~~~~lp~~l~~L~~-L~~L~Ls~N~L~~IP~~l~~L~~--L~~L~Ls~N~L~~L-P---~~l~--~L~~L~~L~ 216 (1137)
+|.+. .+|..+.++++ |+.|+|++|.|+.+|..+..++. |+.|+|++|+|+.. | ..+. .+++|+.|+
T Consensus 604 ~N~l~----~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~ 679 (876)
T 4ecn_A 604 YNQIE----EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679 (876)
T ss_dssp SSCCS----CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEE
T ss_pred CCccc----cchHHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEE
Confidence 96654 67888999999 99999999999999998877764 99999999999743 3 2333 456999999
Q ss_pred ccCCCCCccCcccc-CCCCCCEEeccCCcCCCCCcccccCC-------CCCCEEEccCCcCCCCC------CCCcchhhc
Q 001152 217 VANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGSLDLCLM-------HNLQNLNLQYNKLLSYC------QVPSWICCN 282 (1137)
Q Consensus 217 Ls~N~Ls~IP~~l~-~L~~L~~LdLS~N~Lsg~~p~~l~~L-------~~L~~L~Ls~N~L~~~~------~iP~~~~~~ 282 (1137)
|++|+|+.+|..++ .+++|+.|+|++|+|+.+++..+..+ ++|+.|+|++|+|+.++ .+|....++
T Consensus 680 Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~ 759 (876)
T 4ecn_A 680 LSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMD 759 (876)
T ss_dssp CCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEE
T ss_pred ccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCccchHHhhhccCCCcCEEE
Confidence 99999999998876 79999999999999997776444433 39999999999998632 233334456
Q ss_pred cCCCCCCC
Q 001152 283 LEGNGKDS 290 (1137)
Q Consensus 283 l~~n~l~~ 290 (1137)
+++|.+..
T Consensus 760 Ls~N~L~~ 767 (876)
T 4ecn_A 760 VSYNCFSS 767 (876)
T ss_dssp CCSSCCSS
T ss_pred eCCCCCCc
Confidence 66666654
No 276
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.95 E-value=2e-26 Score=261.88 Aligned_cols=242 Identities=19% Similarity=0.227 Sum_probs=212.6
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCcEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNL 96 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~~L 96 (1137)
.++.+.+..+.++.++.... ++|++|+|++|+|++..+..|+.+ ++|++|+|++|.++.+ |..|.++++|++|
T Consensus 32 ~l~~l~~~~~~l~~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDLP---PDTALLDLQNNKITEIKDGDFKNL---KNLHTLILINNKISKISPGAFAPLVKLERL 105 (330)
T ss_dssp ETTEEECTTSCCCSCCCSCC---TTCCEEECCSSCCCCBCTTTTTTC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred CCeEEEecCCCccccCccCC---CCCeEEECCCCcCCEeChhhhccC---CCCCEEECCCCcCCeeCHHHhcCCCCCCEE
Confidence 56778888889988865432 689999999999999888766555 9999999999999987 7789999999999
Q ss_pred EccCCCCCcccccccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCC
Q 001152 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1137)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1137)
+|++|.|+.+|..+. ++|+.|++++|.+..++ ..+.++++|+.|++++|.+.. .+..+..+.++++|+.|++++|.
T Consensus 106 ~Ls~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 106 YLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS-SGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp ECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG-GGBCTTGGGGCTTCCEEECCSSC
T ss_pred ECCCCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc-cCcChhhccCCCCcCEEECCCCc
Confidence 999999999998876 79999999999977666 468999999999999976632 33556788999999999999999
Q ss_pred CcccCccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeccCCcCCCCCcccc
Q 001152 176 IRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDL 253 (1137)
Q Consensus 176 L~~IP~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdLS~N~Lsg~~p~~l 253 (1137)
++.+|..+. ++|++|+|++|+++.+ |..+..+++|+.|+|++|.++.++. .+..+++|+.|+|++|+|+.++ ..+
T Consensus 183 l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp-~~l 259 (330)
T 1xku_A 183 ITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVP-GGL 259 (330)
T ss_dssp CCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCC-TTT
T ss_pred cccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCC-hhh
Confidence 999998664 8999999999999966 6789999999999999999997754 7888999999999999999775 479
Q ss_pred cCCCCCCEEEccCCcCCC
Q 001152 254 CLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 254 ~~L~~L~~L~Ls~N~L~~ 271 (1137)
..+++|++|+|++|+|++
T Consensus 260 ~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp TTCSSCCEEECCSSCCCC
T ss_pred ccCCCcCEEECCCCcCCc
Confidence 999999999999999987
No 277
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=9.8e-27 Score=264.77 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=220.2
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcE
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~ 95 (1137)
++.++.|.+..|+|+.+.+.+|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.+|..+. ++|++
T Consensus 53 ~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~--~~L~~ 127 (332)
T 2ft3_A 53 SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPL---RKLQKLYISKNHLVEIPPNLP--SSLVE 127 (332)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTC---TTCCEEECCSSCCCSCCSSCC--TTCCE
T ss_pred CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCc---CCCCEEECCCCcCCccCcccc--ccCCE
Confidence 3579999999999999999999999999999999999999888877655 999999999999999998776 79999
Q ss_pred EEccCCCCCccccc-ccCCCCCCEEEccCCCCC---CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEec
Q 001152 96 LKFFGNEINLFPSE-VGNLLGLECLQIKISSPG---VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1137)
Q Consensus 96 L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~~~---~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~L 171 (1137)
|+|++|.|+.+|.. |.++++|+.|+|++|.+. ..+..+..+ +|+.|++++|.+.. +|..+. ++|+.|++
T Consensus 128 L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~----l~~~~~--~~L~~L~l 200 (332)
T 2ft3_A 128 LRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG----IPKDLP--ETLNELHL 200 (332)
T ss_dssp EECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS----CCSSSC--SSCSCCBC
T ss_pred EECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc----cCcccc--CCCCEEEC
Confidence 99999999988765 899999999999999975 556677777 99999999976654 454443 68999999
Q ss_pred cCCCCcccC-ccccCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCC
Q 001152 172 CHFSIRYLP-PEIGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLG 249 (1137)
Q Consensus 172 s~N~L~~IP-~~l~~L~~L~~L~Ls~N~L~~LP~-~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~ 249 (1137)
++|.++.++ ..|..+++|+.|+|++|+|+.++. .+..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+|++++
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~~~ 280 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVG 280 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCBCC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCccC
Confidence 999999776 578999999999999999997764 789999999999999999999999999999999999999999998
Q ss_pred cccccCC------CCCCEEEccCCcCCCCCCCCcch
Q 001152 250 SLDLCLM------HNLQNLNLQYNKLLSYCQVPSWI 279 (1137)
Q Consensus 250 p~~l~~L------~~L~~L~Ls~N~L~~~~~iP~~~ 279 (1137)
+..|..+ ..|+.|+|++|++......|..+
T Consensus 281 ~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~ 316 (332)
T 2ft3_A 281 VNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATF 316 (332)
T ss_dssp TTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGG
T ss_pred hhHccccccccccccccceEeecCcccccccCcccc
Confidence 8777654 67999999999987543334333
No 278
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.95 E-value=6.3e-27 Score=284.31 Aligned_cols=130 Identities=16% Similarity=0.116 Sum_probs=104.0
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCCCCcE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRN 95 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP-~~~~~L~~L~~ 95 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|||++|+|++..+..|+.+ ++|++|+|++|.++.+| ..|.++++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSL---SHLSTLILTGNPIQSLALGAFSGLSSLQK 104 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTC---TTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCc---hhCCEEeCcCCcCCccCHhhhcCcccccc
Confidence 468888888888888888888888888888888888888777666544 88888888888888775 56888888888
Q ss_pred EEccCCCCCcccc-cccCCCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCC
Q 001152 96 LKFFGNEINLFPS-EVGNLLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPP 149 (1137)
Q Consensus 96 L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~~~~--~~~~~~~L~~L~~L~Ls~n~l 149 (1137)
|+|++|.++.+|. .++++++|++|+|++|.+.. +|..+.++++|++|++++|.+
T Consensus 105 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l 161 (570)
T 2z63_A 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (570)
T ss_dssp EECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCC
T ss_pred ccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcc
Confidence 8888888887765 57888888888888887664 467788888888888877654
No 279
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=1.1e-26 Score=285.07 Aligned_cols=288 Identities=18% Similarity=0.166 Sum_probs=240.7
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCcEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNL 96 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~~L 96 (1137)
.++.|.+..|+++.+.+..|.++++|++|+|++|+++. +|..+ .++++|++|+|++|.++.+ |..+.++++|++|
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-lp~~l---~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGL---VGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSC-CCSSC---CSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccCC-CChhh---cccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 57889999999999999999999999999999999994 55545 4559999999999999977 5689999999999
Q ss_pred EccCCCCC-ccccc-ccCCCCCCEEEccCCCCCCC---cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEec
Q 001152 97 KFFGNEIN-LFPSE-VGNLLGLECLQIKISSPGVN---GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1137)
Q Consensus 97 ~Ls~N~L~-~lP~~-l~~L~~L~~L~Ls~N~~~~~---~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~L 171 (1137)
+|++|.+. .+|.. +.++++|+.|+|++|.+... +..+..+++|++|++++|.+ ....|..+..+++|+.|++
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l---~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEP---LSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSC---EEECTTTTTTCTTCSEEEC
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcC---CcCCHHHhcCCccCCeEEC
Confidence 99999997 77665 89999999999999997765 56789999999999999544 4455778899999999999
Q ss_pred cCCCCccc-Cc-cccCCCCCCEEEccCCCCCc-cchhhcCCCCCCEEEccCCCCCc--cC--ccccCCCCCCEEeccCCc
Q 001152 172 CHFSIRYL-PP-EIGCLSNLEQLDLSFNKMKY-LPTEICYLKALISLKVANNKLVE--LP--SGLYLLQRLENLDLSNNR 244 (1137)
Q Consensus 172 s~N~L~~I-P~-~l~~L~~L~~L~Ls~N~L~~-LP~~l~~L~~L~~L~Ls~N~Ls~--IP--~~l~~L~~L~~LdLS~N~ 244 (1137)
++|.++.+ |. .+..+++|++|+|++|.++. .|..+..+++|+.|+|++|+++. +| ..+..+++|+.|+|++|+
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 99999854 44 48999999999999999995 46778999999999999999984 33 568889999999999999
Q ss_pred CCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCcccccccccccCCCc------ccCCCCCcc
Q 001152 245 LTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPM------LENDGNVSF 318 (1137)
Q Consensus 245 Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~l~g~i------l~~~~~~sf 318 (1137)
+++++|..|..+++|+.|+|++|++++ ..|..+.. ...+ ..++++|.+.+.. +..+....+
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~l~~----------l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l 554 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTS--SSIEALSH----------LKGI-YLNLASNHISIILPSLLPILSQQRTINL 554 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCG--GGGGGGTT----------CCSC-EEECCSSCCCCCCGGGHHHHHTSSEEEC
T ss_pred cCccChhhhccccCCCEEECCCCccCc--CChhHhCc----------cccc-EEECcCCcccccCHhhcccCCCCCEEeC
Confidence 999999899999999999999999987 23333321 1223 4455555555433 345566778
Q ss_pred cCCCCCC
Q 001152 319 SGSRHTS 325 (1137)
Q Consensus 319 ~GN~~lC 325 (1137)
+|||..|
T Consensus 555 ~~N~~~c 561 (606)
T 3t6q_A 555 RQNPLDC 561 (606)
T ss_dssp TTCCEEC
T ss_pred CCCCccc
Confidence 8999998
No 280
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=4.1e-27 Score=268.57 Aligned_cols=209 Identities=24% Similarity=0.267 Sum_probs=195.2
Q ss_pred CCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001152 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n 147 (1137)
.+++.|+|++|.|+.||..++++++|++|+|++|.|+.+|..++++++|++|+|++|.+..+|..+..+++|++|+|++|
T Consensus 81 ~~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n 160 (328)
T 4fcg_A 81 PGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRAC 160 (328)
T ss_dssp TTCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEE
T ss_pred cceeEEEccCCCchhcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCCCCcccchhhhc---------CCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEcc
Q 001152 148 PPRPSVLTLLSEIA---------GLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVA 218 (1137)
Q Consensus 148 ~ln~~~~~lp~~l~---------~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls 218 (1137)
. ..+.+|..+. ++++|+.|++++|+|+.+|..++.+++|++|+|++|+|+.+|..++.+++|+.|+|+
T Consensus 161 ~---~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 161 P---ELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLR 237 (328)
T ss_dssp T---TCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECT
T ss_pred C---CccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECc
Confidence 4 4455666554 499999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-ccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhh
Q 001152 219 NNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICC 281 (1137)
Q Consensus 219 ~N~Ls-~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1137)
+|.+. .+|..++.+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.+ .+|.++.-
T Consensus 238 ~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~--~iP~~l~~ 299 (328)
T 4fcg_A 238 GCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS--RLPSLIAQ 299 (328)
T ss_dssp TCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC--CCCGGGGG
T ss_pred CCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh--hccHHHhh
Confidence 99877 889999999999999999999999999999999999999999999988 78888763
No 281
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=6.2e-26 Score=258.90 Aligned_cols=271 Identities=18% Similarity=0.236 Sum_probs=198.4
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~ 97 (1137)
.++.|.+..|.++.+. .|..+++|++|+|++|++++..+ + .++++|++|+|++|.++.+| .|.++++|++|+
T Consensus 45 ~L~~L~l~~~~i~~~~--~~~~~~~L~~L~l~~n~i~~~~~--~---~~l~~L~~L~L~~n~i~~~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 45 SITKLVVAGEKVASIQ--GIEYLTNLEYLNLNGNQITDISP--L---SNLVKLTNLYIGTNKITDIS-ALQNLTNLRELY 116 (347)
T ss_dssp TCSEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--G---TTCTTCCEEECCSSCCCCCG-GGTTCTTCSEEE
T ss_pred cccEEEEeCCccccch--hhhhcCCccEEEccCCccccchh--h---hcCCcCCEEEccCCcccCch-HHcCCCcCCEEE
Confidence 5778888888888874 47888889999999988887654 4 44588889999888888875 588888899999
Q ss_pred ccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCc
Q 001152 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1137)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1137)
|++|.++.+|. +.++++|+.|++++|........+..+++|++|++++|.+.... . +..+++|+.|++++|.++
T Consensus 117 l~~n~i~~~~~-~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~----~-~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 117 LNEDNISDISP-LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVT----P-IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp CTTSCCCCCGG-GTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCG----G-GGGCTTCSEEECTTSCCC
T ss_pred CcCCcccCchh-hccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcCCch----h-hccCCCCCEEEccCCccc
Confidence 99888888876 88888888888888864444445788888888888886554322 2 677888888888888888
Q ss_pred ccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCCC
Q 001152 178 YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMH 257 (1137)
Q Consensus 178 ~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~ 257 (1137)
.++. +..+++|+.|++++|.++.++. +..+++|+.|+|++|.++.+|. +..+++|+.|+|++|.++++ + .+..++
T Consensus 191 ~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~ 265 (347)
T 4fmz_A 191 DISP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI-N-AVKDLT 265 (347)
T ss_dssp CCGG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC-G-GGTTCT
T ss_pred cccc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC-h-hHhcCC
Confidence 7766 6777888888888888887664 7777888888888888887766 77788888888888888876 2 577788
Q ss_pred CCCEEEccCCcCCCCC---CCCcchhhccCCCCCCC-------CCCCcccccccccccCC
Q 001152 258 NLQNLNLQYNKLLSYC---QVPSWICCNLEGNGKDS-------SNDDFISSSAEMDVYEG 307 (1137)
Q Consensus 258 ~L~~L~Ls~N~L~~~~---~iP~~~~~~l~~n~l~~-------~~~~l~~~~~s~n~l~g 307 (1137)
+|+.|++++|+++.+. .+|....+++++|.+.. ..+.+...+++.|.+.+
T Consensus 266 ~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 266 KLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp TCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred CcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 8888888888777632 22333334455554432 12344445555555444
No 282
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=7.5e-27 Score=271.49 Aligned_cols=283 Identities=17% Similarity=0.155 Sum_probs=211.5
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCCCCcE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRN 95 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP-~~~~~L~~L~~ 95 (1137)
+.++.+.+..|.|+.+++..|.++++|++|+|++|.|++..+..|..+ ++|++|+|++|.++.+| ..|.++++|++
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYA---HTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCC---CCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 367888899999999999889999999999999999998887766554 99999999999999886 46899999999
Q ss_pred EEccCCCCCccccc-ccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCC--------
Q 001152 96 LKFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKC-------- 165 (1137)
Q Consensus 96 L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~-------- 165 (1137)
|+|++|.|+.+|.. |.++++|++|+|++|.+..++ ..+..+++|++|++++|.+.... +..+++
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~l~~L~~L~l~~ 195 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD------LSLIPSLFHANVSY 195 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC------GGGCTTCSEEECCS
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc------cccccccceeeccc
Confidence 99999999999887 589999999999999977654 56899999999999998765432 233444
Q ss_pred -----------CcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCcc-CccccCCC
Q 001152 166 -----------LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL-PSGLYLLQ 233 (1137)
Q Consensus 166 -----------L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~ 233 (1137)
|+.|++++|.++.+|.. .+++|+.|+|++|+++.++ .+..+++|+.|+|++|.++.+ |..+..++
T Consensus 196 n~l~~~~~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (390)
T 3o6n_A 196 NLLSTLAIPIAVEELDASHNSINVVRGP--VNVELTILKLQHNNLTDTA-WLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 272 (390)
T ss_dssp SCCSEEECCSSCSEEECCSSCCCEEECC--CCSSCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCEEESGGGTTCS
T ss_pred ccccccCCCCcceEEECCCCeeeecccc--ccccccEEECCCCCCcccH-HHcCCCCccEEECCCCcCCCcChhHccccc
Confidence 45555555555554442 2357777777777777654 677777888888888887754 66677778
Q ss_pred CCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCcccccccccccCCCc---c
Q 001152 234 RLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPM---L 310 (1137)
Q Consensus 234 ~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~l~g~i---l 310 (1137)
+|+.|+|++|+|++++. .+..+++|+.|+|++|+++. +|..+... +.+...++++|.+..-. +
T Consensus 273 ~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~L~~n~l~~---~~~~~~~l----------~~L~~L~L~~N~i~~~~~~~~ 338 (390)
T 3o6n_A 273 RLERLYISNNRLVALNL-YGQPIPTLKVLDLSHNHLLH---VERNQPQF----------DRLENLYLDHNSIVTLKLSTH 338 (390)
T ss_dssp SCCEEECCSSCCCEEEC-SSSCCTTCCEEECCSSCCCC---CGGGHHHH----------TTCSEEECCSSCCCCCCCCTT
T ss_pred cCCEEECCCCcCcccCc-ccCCCCCCCEEECCCCccee---cCcccccc----------CcCCEEECCCCccceeCchhh
Confidence 88888888888877643 55677788888888887765 34333211 22333334444333322 4
Q ss_pred cCCCCCcccCCCCCC
Q 001152 311 ENDGNVSFSGSRHTS 325 (1137)
Q Consensus 311 ~~~~~~sf~GN~~lC 325 (1137)
.++....++||+.-|
T Consensus 339 ~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 339 HTLKNLTLSHNDWDC 353 (390)
T ss_dssp CCCSEEECCSSCEEH
T ss_pred ccCCEEEcCCCCccc
Confidence 455566778999888
No 283
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=2e-26 Score=282.60 Aligned_cols=305 Identities=16% Similarity=0.120 Sum_probs=208.7
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCCCCcE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRN 95 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP-~~~~~L~~L~~ 95 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|+|++|.|++..|..|+.+ ++|++|+|++|.++.+| ..|+++++|++
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 132 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGL---TSLENLVAVETKLASLESFPIGQLITLKK 132 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTC---TTCCEEECTTSCCCCSSSSCCTTCTTCCE
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCc---ccCCEEEccCCccccccccccCCCCCCCE
Confidence 368888888888888888888888888888888888888877766544 78888888888887775 56778888888
Q ss_pred EEccCCCCC--cccccccCCCCCCEEEccCCCCCCCc-ccc---------------------------------------
Q 001152 96 LKFFGNEIN--LFPSEVGNLLGLECLQIKISSPGVNG-FAL--------------------------------------- 133 (1137)
Q Consensus 96 L~Ls~N~L~--~lP~~l~~L~~L~~L~Ls~N~~~~~~-~~~--------------------------------------- 133 (1137)
|+|++|.++ .+|..|+++++|++|+|++|.+..++ ..+
T Consensus 133 L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~ 212 (606)
T 3vq2_A 133 LNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLR 212 (606)
T ss_dssp EECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEE
T ss_pred EeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeecc
Confidence 888888876 46777888888888777777643321 101
Q ss_pred --------------------------------------------------------------------------------
Q 001152 134 -------------------------------------------------------------------------------- 133 (1137)
Q Consensus 134 -------------------------------------------------------------------------------- 133 (1137)
T Consensus 213 ~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l 292 (606)
T 3vq2_A 213 GNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSL 292 (606)
T ss_dssp SCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEE
T ss_pred CCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEe
Confidence
Q ss_pred ------------------------------------------------------cCCCCCCEEECCCCCCCCCcccchhh
Q 001152 134 ------------------------------------------------------NKLKGLKELELSKVPPRPSVLTLLSE 159 (1137)
Q Consensus 134 ------------------------------------------------------~~L~~L~~L~Ls~n~ln~~~~~lp~~ 159 (1137)
..+++|++|++++|.+.. ...+|..
T Consensus 293 ~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-~~~~~~~ 371 (606)
T 3vq2_A 293 AGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSF-SGCCSYS 371 (606)
T ss_dssp ESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEE-EEECCHH
T ss_pred cCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCC-Ccchhhh
Confidence 012223333333322110 0112566
Q ss_pred hcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccc--hhhcCCCCCCEEEccCCCCC-ccCccccCCCCCC
Q 001152 160 IAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLP--TEICYLKALISLKVANNKLV-ELPSGLYLLQRLE 236 (1137)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP--~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~ 236 (1137)
+..+++|+.|++++|.++.+|..+..+++|+.|+|++|+++.++ ..+..+++|+.|+|++|.++ .+|..+..+++|+
T Consensus 372 ~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 451 (606)
T 3vq2_A 372 DLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLN 451 (606)
T ss_dssp HHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred hccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCC
Confidence 77788888888888888888877888888888888888887554 36777778888888888777 3566677777777
Q ss_pred EEeccCCcCCC-CCcccccCCCCCCEEEccCCcCCCC-----CCCCcchhhccCCCCCCCC-------CCCccccccccc
Q 001152 237 NLDLSNNRLTS-LGSLDLCLMHNLQNLNLQYNKLLSY-----CQVPSWICCNLEGNGKDSS-------NDDFISSSAEMD 303 (1137)
Q Consensus 237 ~LdLS~N~Lsg-~~p~~l~~L~~L~~L~Ls~N~L~~~-----~~iP~~~~~~l~~n~l~~~-------~~~l~~~~~s~n 303 (1137)
.|+|++|++++ .+|..+..+++|+.|+|++|++++. ..++..-.+++++|.+... ...+...++++|
T Consensus 452 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 77777777776 3556677777777777777777652 2334444466666655542 235666777777
Q ss_pred ccCCCc--cc----CCCCCcccCCCCCC
Q 001152 304 VYEGPM--LE----NDGNVSFSGSRHTS 325 (1137)
Q Consensus 304 ~l~g~i--l~----~~~~~sf~GN~~lC 325 (1137)
.+..-. +. .+....++|||..|
T Consensus 532 ~l~~~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 532 RIETSKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp CCCCEESCGGGSCTTCCEEECCSCCCCC
T ss_pred cCcccCHhHhhhcccCcEEEccCCCccc
Confidence 776321 22 24455788999998
No 284
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=2.5e-28 Score=298.67 Aligned_cols=191 Identities=15% Similarity=0.112 Sum_probs=129.3
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCC--ChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeeEecCCCCCC
Q 001152 808 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGS--SADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPS 882 (1137)
Q Consensus 808 ~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~--~~~~~e~~~~~~lrEi~iL~~L-~HpNIVkllg~~~~~~~~~~ 882 (1137)
...+.|+.|.+..++. -+..+++|++....... .....+...+.+.+|+++|+++ .|+||++++++++++.
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~---- 315 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ---- 315 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS----
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC----
Confidence 4567777777665543 57889999976553322 2333333344579999999999 5999999999999876
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEeccccc
Q 001152 883 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 962 (1137)
Q Consensus 883 ~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~~~ 962 (1137)
+.||||||++|++|.++|.+ ...+++. +|+.||+.||+|+|++|||||||||+|||++.+
T Consensus 316 ----------~~yLVMEyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~d-- 375 (569)
T 4azs_A 316 ----------SGWLVMEKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDAR-- 375 (569)
T ss_dssp ----------EEEEEEECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTT--
T ss_pred ----------EEEEEEecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCC--
Confidence 67999999999999999976 2456654 589999999999999999999999999999987
Q ss_pred cCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001152 963 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1042 (1137)
Q Consensus 963 ~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG~ 1042 (1137)
+.+||+|||+|+....... .....+||+.|||||++.+ .+..++|+||+|+++++|.++.
T Consensus 376 -----g~vKL~DFGlAr~~~~~~~----------~~~t~vGTp~YmAPE~l~g-----~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 376 -----QHARLIDFGSIVTTPQDCS----------WPTNLVQSFFVFVNELFAE-----NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp -----SCEEECCCTTEESCC---C----------CSHHHHHHHHHHHHHHC----------------------CCCCTTH
T ss_pred -----CCEEEeecccCeeCCCCCc----------cccCceechhhccHHHhCC-----CCCCcccccccccchhhhcccc
Confidence 7899999999986543221 1224579999999999875 3567899999999988776553
No 285
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=278.19 Aligned_cols=243 Identities=21% Similarity=0.216 Sum_probs=159.2
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCc--cCccccCCCCCc
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNL--IPKSVGRYEKLR 94 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~--IP~~~~~L~~L~ 94 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|||++|+|++ +|.. .+++|++|+|++|.++. +|..|+++++|+
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-----~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 118 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH-----PTVNLKHLDLSFNAFDALPICKEFGNMSQLK 118 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC-----CCCCCSEEECCSSCCSSCCCCGGGGGCTTCC
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc-----ccCCccEEeccCCccccccchhhhccCCcce
Confidence 368888899999998888888999999999999988884 4432 45788888888888875 567788888888
Q ss_pred EEEccCCCCCc--------------------------ccccccCCC----------------------------------
Q 001152 95 NLKFFGNEINL--------------------------FPSEVGNLL---------------------------------- 114 (1137)
Q Consensus 95 ~L~Ls~N~L~~--------------------------lP~~l~~L~---------------------------------- 114 (1137)
+|+|++|.|+. +|..+.++.
T Consensus 119 ~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 198 (520)
T 2z7x_B 119 FLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIK 198 (520)
T ss_dssp EEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEE
T ss_pred EEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccc
Confidence 88887776641 122222211
Q ss_pred -------------------------------------------------CCCEEEccCCCCC-CCcccc-----------
Q 001152 115 -------------------------------------------------GLECLQIKISSPG-VNGFAL----------- 133 (1137)
Q Consensus 115 -------------------------------------------------~L~~L~Ls~N~~~-~~~~~~----------- 133 (1137)
+|+.|+|++|.+. .+|..+
T Consensus 199 ~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L 278 (520)
T 2z7x_B 199 CVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKAL 278 (520)
T ss_dssp ECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEE
T ss_pred ccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCcee
Confidence 3444444444322 222211
Q ss_pred ------------------------------------------cCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEec
Q 001152 134 ------------------------------------------NKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1137)
Q Consensus 134 ------------------------------------------~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~L 171 (1137)
..+++|++|++++|.+. ..+|..+..+++|+.|++
T Consensus 279 ~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~L 355 (520)
T 2z7x_B 279 SIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLT---DTVFENCGHLTELETLIL 355 (520)
T ss_dssp EEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCC---TTTTTTCCCCSSCCEEEC
T ss_pred EeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccC---hhhhhhhccCCCCCEEEc
Confidence 46667777777775443 335566777777777777
Q ss_pred cCCCCcc---cCccccCCCCCCEEEccCCCCCc-cchh-hcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeccCCcC
Q 001152 172 CHFSIRY---LPPEIGCLSNLEQLDLSFNKMKY-LPTE-ICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRL 245 (1137)
Q Consensus 172 s~N~L~~---IP~~l~~L~~L~~L~Ls~N~L~~-LP~~-l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~LdLS~N~L 245 (1137)
++|+++. +|..++.+++|++|+|++|+++. +|.. +..+++|+.|+|++|+++ .+|..+. ++|+.|+|++|+|
T Consensus 356 ~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l 433 (520)
T 2z7x_B 356 QMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKI 433 (520)
T ss_dssp CSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCC
T ss_pred cCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCcc
Confidence 7777774 34556777777777777777775 7654 555666666666666665 4454443 5666666666666
Q ss_pred CCCCcccccCCCCCCEEEccCCcCCC
Q 001152 246 TSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 246 sg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+.+++ .+..+++|+.|+|++|+|+.
T Consensus 434 ~~ip~-~~~~l~~L~~L~L~~N~l~~ 458 (520)
T 2z7x_B 434 KSIPK-QVVKLEALQELNVASNQLKS 458 (520)
T ss_dssp CCCCG-GGGGCTTCCEEECCSSCCCC
T ss_pred cccch-hhhcCCCCCEEECCCCcCCc
Confidence 64433 44466666666666666654
No 286
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.94 E-value=3.5e-26 Score=278.83 Aligned_cols=243 Identities=21% Similarity=0.196 Sum_probs=173.6
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC--ccccCCCCCc
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP--KSVGRYEKLR 94 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP--~~~~~L~~L~ 94 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|||++|+|+. +|.. .+++|++|+|++|+++.+| ..|+++++|+
T Consensus 76 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-----~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~ 149 (562)
T 3a79_B 76 SELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC-----PMASLRHLDLSFNDFDVLPVCKEFGNLTKLT 149 (562)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC-----CCTTCSEEECCSSCCSBCCCCGGGGGCTTCC
T ss_pred CCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc-----ccccCCEEECCCCCccccCchHhhcccCccc
Confidence 479999999999999999999999999999999999985 4432 4589999999999999764 6899999999
Q ss_pred EEEccCCCCCcc--------------------------cccccCCC----------------------------------
Q 001152 95 NLKFFGNEINLF--------------------------PSEVGNLL---------------------------------- 114 (1137)
Q Consensus 95 ~L~Ls~N~L~~l--------------------------P~~l~~L~---------------------------------- 114 (1137)
+|+|++|.|+.. |..+.++.
T Consensus 150 ~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 229 (562)
T 3a79_B 150 FLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIK 229 (562)
T ss_dssp EEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEE
T ss_pred EEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccc
Confidence 999999987531 11111111
Q ss_pred -----------------------------------------------CCCEEEccCCCCC-CCcccc-------------
Q 001152 115 -----------------------------------------------GLECLQIKISSPG-VNGFAL------------- 133 (1137)
Q Consensus 115 -----------------------------------------------~L~~L~Ls~N~~~-~~~~~~------------- 133 (1137)
+|++|++++|.+. .+|..+
T Consensus 230 ~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~ 309 (562)
T 3a79_B 230 LNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMI 309 (562)
T ss_dssp CCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEE
T ss_pred ccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheeh
Confidence 2333333333322 233222
Q ss_pred ----------------------------------------cCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccC
Q 001152 134 ----------------------------------------NKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1137)
Q Consensus 134 ----------------------------------------~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1137)
..+++|++|++++|.+. ..+|..+.++++|+.|++++
T Consensus 310 ~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~---~~~~~~~~~l~~L~~L~L~~ 386 (562)
T 3a79_B 310 EHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFT---DSVFQGCSTLKRLQTLILQR 386 (562)
T ss_dssp EEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCC---TTTTTTCCSCSSCCEEECCS
T ss_pred hhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccc---cchhhhhcccCCCCEEECCC
Confidence 56677888888885543 34566777888888888888
Q ss_pred CCCcccC---ccccCCCCCCEEEccCCCCCc-cchh-hcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeccCCcCCC
Q 001152 174 FSIRYLP---PEIGCLSNLEQLDLSFNKMKY-LPTE-ICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 174 N~L~~IP---~~l~~L~~L~~L~Ls~N~L~~-LP~~-l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~LdLS~N~Lsg 247 (1137)
|+++.+| ..+..+++|++|+|++|+++. +|.. +..+++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+.
T Consensus 387 N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ 464 (562)
T 3a79_B 387 NGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS 464 (562)
T ss_dssp SCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC
T ss_pred CCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc
Confidence 8888654 457788888888888888875 7754 566777777777777776 4555443 567777777777776
Q ss_pred CCcccccCCCCCCEEEccCCcCCC
Q 001152 248 LGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 248 ~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+++ .+..+++|+.|+|++|+|+.
T Consensus 465 ip~-~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 465 IPK-DVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp CCT-TTTSSCCCSEEECCSSCCCC
T ss_pred cCh-hhcCCCCCCEEECCCCCCCC
Confidence 554 44477777777777777764
No 287
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=3e-26 Score=254.99 Aligned_cols=229 Identities=21% Similarity=0.229 Sum_probs=184.2
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCcEEEccCCCCCcc-cccccCCCCCCEEEc
Q 001152 44 SVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLF-PSEVGNLLGLECLQI 121 (1137)
Q Consensus 44 ~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~L 121 (1137)
.++++++++++..+.. + .++|++|+|++|.++.+|. .|.++++|++|+|++|.|+.+ |..|.++++|++|+|
T Consensus 14 ~~~~c~~~~l~~ip~~-~-----~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 87 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG-I-----PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDL 87 (285)
T ss_dssp CEEECCSSCCSSCCTT-C-----CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred eEEEcCcCCcccCCcC-C-----CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeC
Confidence 5677777777755332 1 2567777777777777653 577777788888877777765 566777777888888
Q ss_pred cCCC-CCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCC
Q 001152 122 KISS-PGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNK 198 (1137)
Q Consensus 122 s~N~-~~~~-~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~ 198 (1137)
++|. +..+ +..+..+++|++|++++|.+.. ..|..+.++++|++|++++|+++.+|. .|..+++|+.|+|++|+
T Consensus 88 ~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~---~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 164 (285)
T 1ozn_A 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE---LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR 164 (285)
T ss_dssp CSCTTCCCCCTTTTTTCTTCCEEECTTSCCCC---CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCCccccCHHHhcCCcCCCEEECCCCcCCE---ECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCc
Confidence 7775 5555 4567778888888888755433 335567889999999999999998876 47899999999999999
Q ss_pred CCccch-hhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCC
Q 001152 199 MKYLPT-EICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVP 276 (1137)
Q Consensus 199 L~~LP~-~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP 276 (1137)
|+.+|. .+..+++|+.|+|++|.++.+ |..+..+++|+.|+|++|+|+++++..+..+++|+.|+|++|+|.|.|.+.
T Consensus 165 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 244 (285)
T 1ozn_A 165 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH
Confidence 998876 488999999999999999966 788999999999999999999999888999999999999999999988766
Q ss_pred cchhh
Q 001152 277 SWICC 281 (1137)
Q Consensus 277 ~~~~~ 281 (1137)
....|
T Consensus 245 ~~~~~ 249 (285)
T 1ozn_A 245 PLWAW 249 (285)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 288
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=3.4e-27 Score=270.88 Aligned_cols=244 Identities=18% Similarity=0.214 Sum_probs=133.3
Q ss_pred ccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCCCCcEEEccC
Q 001152 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLKFFG 100 (1137)
Q Consensus 22 L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP-~~~~~L~~L~~L~Ls~ 100 (1137)
.....|+++.++...+ ++|++|+|++|+|++..+..|.. +++|++|+|++|.++.++ ..|.++++|++|+|++
T Consensus 36 c~~~~~~l~~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 36 CKGSSGSLNSIPSGLT---EAVKSLDLSNNRITYISNSDLQR---CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp EECCSTTCSSCCTTCC---TTCCEEECTTSCCCEECTTTTTT---CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eeCCCCCccccccccc---ccCcEEECCCCcCcccCHHHhcc---CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 3444445554443222 24555555555555444333322 245555555555555442 3355555555555555
Q ss_pred CCCCccccc-ccCCCCCCEEEccCCCCCCCcc--cccCCCCCCEEECCCCCCCCCcccc-hhhhcCCCCCcEEeccCCCC
Q 001152 101 NEINLFPSE-VGNLLGLECLQIKISSPGVNGF--ALNKLKGLKELELSKVPPRPSVLTL-LSEIAGLKCLTKLSVCHFSI 176 (1137)
Q Consensus 101 N~L~~lP~~-l~~L~~L~~L~Ls~N~~~~~~~--~~~~L~~L~~L~Ls~n~ln~~~~~l-p~~l~~L~~L~~L~Ls~N~L 176 (1137)
|+|+.+|.. |.++++|++|+|++|.+..++. .+..+++|++|++++|. ....+ +..+.++++|+.|++++|.+
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD---TFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS---SCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc---cccccCHHHccCCCCCCEEECCCCCc
Confidence 555544443 4455555555555555444443 34455555555555421 11111 23344455555555555555
Q ss_pred ccc-CccccCCCCCCEEEccCCCCCccchhh-cCCCCCCEEEccCCCCCc------------------------------
Q 001152 177 RYL-PPEIGCLSNLEQLDLSFNKMKYLPTEI-CYLKALISLKVANNKLVE------------------------------ 224 (1137)
Q Consensus 177 ~~I-P~~l~~L~~L~~L~Ls~N~L~~LP~~l-~~L~~L~~L~Ls~N~Ls~------------------------------ 224 (1137)
+.+ |..+..+++|++|+|++|+++.+|..+ ..+++|+.|+|++|.++.
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l 266 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESL 266 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHH
T ss_pred CccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcch
Confidence 432 344455555555555555555444332 224455555555554443
Q ss_pred --cCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001152 225 --LPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1137)
Q Consensus 225 --IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1137)
+|..+..+++|+.|+|++|+|+.+++..|..+++|+.|+|++|+|.|.|+
T Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 267 FQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 56677889999999999999998877667899999999999999998553
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.5e-26 Score=284.54 Aligned_cols=292 Identities=16% Similarity=0.165 Sum_probs=200.9
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCcEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNL 96 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L 96 (1137)
.+..+.+..|.++.+++..|.++++|++|+|++|.|++.+|..|+.+ ++|+.|+|++|.|+.+|+ .|+++++|++|
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYA---HTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCC---CCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 56777888999999999999999999999999999999888777555 999999999999998865 57999999999
Q ss_pred EccCCCCCccccc-ccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCC
Q 001152 97 KFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1137)
Q Consensus 97 ~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1137)
+|++|.|+.+|.. |+++++|++|+|++|.+..++ ..|..+++|+.|+|++|.+... .+..+++|+.|++++|
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV------DLSLIPSLFHANVSYN 202 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC------CGGGCTTCSEEECCSS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc------ChhhhhhhhhhhcccC
Confidence 9999999999877 589999999999999976655 5799999999999999776543 2556889999999999
Q ss_pred CCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCccccc
Q 001152 175 SIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLC 254 (1137)
Q Consensus 175 ~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~ 254 (1137)
.++.++ ..++|+.|+|++|.|+.+|..+. ++|+.|+|++|.|+.+ ..+..+++|+.|+|++|.|++++|..|.
T Consensus 203 ~l~~l~----~~~~L~~L~ls~n~l~~~~~~~~--~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 203 LLSTLA----IPIAVEELDASHNSINVVRGPVN--VELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp CCSEEE----CCTTCSEEECCSSCCCEEECSCC--SCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cccccc----CCchhheeeccCCcccccccccC--CCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 998543 23455566666655554443321 3444444444444432 2344444444444444444444444444
Q ss_pred CCCCCCEEEccCCcCCCCC----CCCcchhhccCCCCCCCCC------CCcccccccccccCCCc---ccCCCCCcccCC
Q 001152 255 LMHNLQNLNLQYNKLLSYC----QVPSWICCNLEGNGKDSSN------DDFISSSAEMDVYEGPM---LENDGNVSFSGS 321 (1137)
Q Consensus 255 ~L~~L~~L~Ls~N~L~~~~----~iP~~~~~~l~~n~l~~~~------~~l~~~~~s~n~l~g~i---l~~~~~~sf~GN 321 (1137)
.+++|+.|+|++|.|++++ .+|..-.+++++|.+...+ +.|...++++|.+.+.. +..+....++||
T Consensus 276 ~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N 355 (597)
T 3oja_B 276 KMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHN 355 (597)
T ss_dssp TCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSS
T ss_pred CccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCCccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCC
Confidence 4444444444444444321 1233333444444433221 23445556666655433 344555677899
Q ss_pred CCCC
Q 001152 322 RHTS 325 (1137)
Q Consensus 322 ~~lC 325 (1137)
+.-|
T Consensus 356 ~~~~ 359 (597)
T 3oja_B 356 DWDC 359 (597)
T ss_dssp CEEH
T ss_pred CCCC
Confidence 9888
No 290
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=2.4e-26 Score=278.32 Aligned_cols=283 Identities=19% Similarity=0.207 Sum_probs=202.6
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCc--cCccccCCCCCc
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNL--IPKSVGRYEKLR 94 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~--IP~~~~~L~~L~ 94 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|||++|+|++.+|..|+.+ ++|++|+|++|.++. +|..|+++++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 126 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL---SSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTC---TTCCEEECTTCCCSSSCSSCSCTTCTTCC
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccC---CCCcEEECCCCcccccchhhhhhccCCcc
Confidence 368888888888888888888888888888888888888877766544 777778887777774 355666667777
Q ss_pred EEEccCCC-CCcccc-cccC------------------------------------------------CCCCCEEEccCC
Q 001152 95 NLKFFGNE-INLFPS-EVGN------------------------------------------------LLGLECLQIKIS 124 (1137)
Q Consensus 95 ~L~Ls~N~-L~~lP~-~l~~------------------------------------------------L~~L~~L~Ls~N 124 (1137)
+|+|++|. ++.+|. .|.+ +++|+.|+|++|
T Consensus 127 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 206 (549)
T 2z81_A 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206 (549)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESC
T ss_pred EEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCC
Confidence 77776665 344432 2332 344555555554
Q ss_pred CCCCC---------------------------------------------------------------------------
Q 001152 125 SPGVN--------------------------------------------------------------------------- 129 (1137)
Q Consensus 125 ~~~~~--------------------------------------------------------------------------- 129 (1137)
.+...
T Consensus 207 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L 286 (549)
T 2z81_A 207 NLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETV 286 (549)
T ss_dssp BCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEE
T ss_pred ccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccc
Confidence 43221
Q ss_pred ---------------------------------------cccc-cCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEE
Q 001152 130 ---------------------------------------GFAL-NKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKL 169 (1137)
Q Consensus 130 ---------------------------------------~~~~-~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L 169 (1137)
|..+ ..+++|+.|++++|.+.......+..++.+++|+.|
T Consensus 287 ~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L 366 (549)
T 2z81_A 287 TIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTL 366 (549)
T ss_dssp EEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEE
T ss_pred cccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEE
Confidence 1111 357888888998866543222223347789999999
Q ss_pred eccCCCCcccCc---cccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCC
Q 001152 170 SVCHFSIRYLPP---EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLT 246 (1137)
Q Consensus 170 ~Ls~N~L~~IP~---~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Ls 246 (1137)
++++|+|+.+|. .+..+++|++|+|++|+|+.+|..++.+++|++|+|++|+|+.+|..+. ++|+.|+|++|+|+
T Consensus 367 ~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~--~~L~~L~Ls~N~l~ 444 (549)
T 2z81_A 367 VLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIP--QTLEVLDVSNNNLD 444 (549)
T ss_dssp ECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSCCCTTSC--TTCSEEECCSSCCS
T ss_pred EccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCcccccchhc--CCceEEECCCCChh
Confidence 999999998763 5889999999999999999999999999999999999999999887664 68899999999988
Q ss_pred CCCcccccCCCCCCEEEccCCcCCCCCC---CCcchhhccCCCCCCCCCC-------CcccccccccccCCC
Q 001152 247 SLGSLDLCLMHNLQNLNLQYNKLLSYCQ---VPSWICCNLEGNGKDSSND-------DFISSSAEMDVYEGP 308 (1137)
Q Consensus 247 g~~p~~l~~L~~L~~L~Ls~N~L~~~~~---iP~~~~~~l~~n~l~~~~~-------~l~~~~~s~n~l~g~ 308 (1137)
+.+ ..+++|+.|+|++|+|+.++. +|....+++++|.+...++ .+...+++.|.+.+.
T Consensus 445 ~~~----~~l~~L~~L~Ls~N~l~~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 445 SFS----LFLPRLQELYISRNKLKTLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CCC----CCCTTCCEEECCSSCCSSCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred hhc----ccCChhcEEECCCCccCcCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 864 467889999999998876432 2333446677776665443 334445555555443
No 291
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.94 E-value=5e-26 Score=290.92 Aligned_cols=290 Identities=19% Similarity=0.186 Sum_probs=217.2
Q ss_pred CCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCC-cccccCCCCCCCccEEEeecCCCCcc-CccccCCCC
Q 001152 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPL-IESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEK 92 (1137)
Q Consensus 15 ~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~-p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~ 92 (1137)
.++.++.|.+..|+|+.+.+.+|.++++|++|||++|.+.+.+ |..|+ ++++|++|+|++|.|+.+ |..|.++++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~---~L~~L~~L~Ls~N~l~~~~p~~~~~l~~ 98 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFR---NLPNLRILDLGSSKIYFLHPDAFQGLFH 98 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTS---SCTTCCEEECTTCCCCEECTTSSCSCSS
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhc---CCCCCCEEECCCCcCcccCHhHccCCcc
Confidence 3457889999999999998888999999999999888665555 55554 448888888888888866 678888888
Q ss_pred CcEEEccCCCCCc-cccc--ccCCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCccc------------
Q 001152 93 LRNLKFFGNEINL-FPSE--VGNLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLT------------ 155 (1137)
Q Consensus 93 L~~L~Ls~N~L~~-lP~~--l~~L~~L~~L~Ls~N~~~~~~--~~~~~L~~L~~L~Ls~n~ln~~~~~------------ 155 (1137)
|++|+|++|.++. +|.. |+++++|++|+|++|.+...+ ..|.++++|++|+|++|.+......
T Consensus 99 L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~ 178 (844)
T 3j0a_A 99 LFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSF 178 (844)
T ss_dssp CCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCC
T ss_pred cCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccce
Confidence 8888888888874 5554 888888888888888865543 4678888888888887765332110
Q ss_pred -----------chhhhc---------------------------------------------------------------
Q 001152 156 -----------LLSEIA--------------------------------------------------------------- 161 (1137)
Q Consensus 156 -----------lp~~l~--------------------------------------------------------------- 161 (1137)
.|..++
T Consensus 179 L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~ 258 (844)
T 3j0a_A 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQN 258 (844)
T ss_dssp CEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGT
T ss_pred EECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChh
Confidence 000000
Q ss_pred ---C--CCCCcEEeccCCCCccc-CccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-CccccCCC
Q 001152 162 ---G--LKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYLLQ 233 (1137)
Q Consensus 162 ---~--L~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~ 233 (1137)
+ .++|+.|++++|.+..+ |..|..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..+..++
T Consensus 259 ~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 338 (844)
T 3j0a_A 259 TFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLP 338 (844)
T ss_dssp TTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCT
T ss_pred hhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCC
Confidence 1 14577777777777744 45678888999999999998855 56788899999999999999866 66788899
Q ss_pred CCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhccCCCCCCCCC---CCcccccccccccCC
Q 001152 234 RLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSN---DDFISSSAEMDVYEG 307 (1137)
Q Consensus 234 ~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~---~~l~~~~~s~n~l~g 307 (1137)
+|+.|+|++|+|+++++..|..+++|+.|+|++|.|+++..+|....+.+++|.+...+ ..+...+++.|.+.+
T Consensus 339 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~ 415 (844)
T 3j0a_A 339 KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLEN 415 (844)
T ss_dssp TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCS
T ss_pred CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCcccc
Confidence 99999999999998888888889999999999999988777777666777777665422 123344555555554
No 292
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.94 E-value=8.1e-26 Score=267.29 Aligned_cols=295 Identities=14% Similarity=0.110 Sum_probs=196.6
Q ss_pred cccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccC-ccccCCCCCcEEEc
Q 001152 21 KLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIP-KSVGRYEKLRNLKF 98 (1137)
Q Consensus 21 ~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~-~IP-~~~~~L~~L~~L~L 98 (1137)
.+....+.++.++. + .++|++|||++|+|++..|..|+.+ ++|++|+|++|.+. .+| ..|.++++|++|+|
T Consensus 14 ~~~c~~~~l~~lp~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l---~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 14 NAICINRGLHQVPE--L--PAHVNYVDLSLNSIAELNETSFSRL---QDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp EEECCSSCCSSCCC--C--CTTCCEEECCSSCCCEECTTTTSSC---TTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCcCCCCcccCCC--C--CCccCEEEecCCccCcCChhHhccC---ccccEEECcCCcccceECcccccccccCCEEeC
Confidence 46667778888876 2 2789999999999999888877655 99999999999997 674 57999999999999
Q ss_pred cCCCCCcc-cccccCCCCCCEEEccCCCCCC-Ccc--cccCCCCCCEEECCCCCCCCCcccchhh-hcCCCCCcEEeccC
Q 001152 99 FGNEINLF-PSEVGNLLGLECLQIKISSPGV-NGF--ALNKLKGLKELELSKVPPRPSVLTLLSE-IAGLKCLTKLSVCH 173 (1137)
Q Consensus 99 s~N~L~~l-P~~l~~L~~L~~L~Ls~N~~~~-~~~--~~~~L~~L~~L~Ls~n~ln~~~~~lp~~-l~~L~~L~~L~Ls~ 173 (1137)
++|.++.+ |..|+++++|++|+|++|.+.. .+. .+..+++|++|+|++|.+... .|.. +.++++|++|++++
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~---~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI---QPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC---CCCGGGGGCTTCCEEECTT
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCcc---CcccccCCCCcccEEeCCC
Confidence 99999966 7889999999999999999764 233 388999999999999765433 3444 78899999999999
Q ss_pred CCCccc-CccccC----------------------------------CCCCCEEEccCCCCC-ccchhhcC---------
Q 001152 174 FSIRYL-PPEIGC----------------------------------LSNLEQLDLSFNKMK-YLPTEICY--------- 208 (1137)
Q Consensus 174 N~L~~I-P~~l~~----------------------------------L~~L~~L~Ls~N~L~-~LP~~l~~--------- 208 (1137)
|.++.+ |..+.. +++|+.|+|++|+++ .+|..+..
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~ 243 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQS 243 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEE
T ss_pred CcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceee
Confidence 998855 334433 245666666666654 22222211
Q ss_pred ------------------------------CCCCCEEEccCCCCCc-cCccccCCCCCCEEeccCCcCCCCCcccccCCC
Q 001152 209 ------------------------------LKALISLKVANNKLVE-LPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMH 257 (1137)
Q Consensus 209 ------------------------------L~~L~~L~Ls~N~Ls~-IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~ 257 (1137)
.++|+.|+|++|.++. +|..+..+++|+.|+|++|+|++++|..|..++
T Consensus 244 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 323 (455)
T 3v47_A 244 LILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT 323 (455)
T ss_dssp EECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred EeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcc
Confidence 1345555555555542 234444555555555555555555544555555
Q ss_pred CCCEEEccCCcCCCC-----CCCCcchhhccCCCCCCCC-------CCCcccccccccccCCCc------ccCCCCCccc
Q 001152 258 NLQNLNLQYNKLLSY-----CQVPSWICCNLEGNGKDSS-------NDDFISSSAEMDVYEGPM------LENDGNVSFS 319 (1137)
Q Consensus 258 ~L~~L~Ls~N~L~~~-----~~iP~~~~~~l~~n~l~~~-------~~~l~~~~~s~n~l~g~i------l~~~~~~sf~ 319 (1137)
+|+.|+|++|.++++ ..++....+++++|.+... .+.+...++++|.+.+-. +..+....++
T Consensus 324 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 403 (455)
T 3v47_A 324 HLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLH 403 (455)
T ss_dssp TCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEcc
Confidence 555555555554431 1223333344444433321 234555666666666522 3345556778
Q ss_pred CCCCCC
Q 001152 320 GSRHTS 325 (1137)
Q Consensus 320 GN~~lC 325 (1137)
||+..|
T Consensus 404 ~N~l~~ 409 (455)
T 3v47_A 404 TNPWDC 409 (455)
T ss_dssp SSCBCC
T ss_pred CCCccc
Confidence 999888
No 293
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=1.8e-25 Score=255.07 Aligned_cols=255 Identities=19% Similarity=0.203 Sum_probs=183.7
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L 96 (1137)
+.++.|.+..|+|+.+.+ |.++++|++|+|++|.++.. + .| .++++|++|+|++|.++.+|. +..+++|++|
T Consensus 66 ~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~-~-~~---~~l~~L~~L~l~~n~i~~~~~-~~~l~~L~~L 137 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI-S-AL---QNLTNLRELYLNEDNISDISP-LANLTKMYSL 137 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-GG---TTCTTCSEEECTTSCCCCCGG-GTTCTTCCEE
T ss_pred CCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc-h-HH---cCCCcCCEEECcCCcccCchh-hccCCceeEE
Confidence 479999999999999876 99999999999999999874 2 34 455999999999999998877 8889999999
Q ss_pred EccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCC
Q 001152 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1137)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1137)
+|++|.....+..+..+++|+.|++++|.+...+. +..+++|+.|++++|.+... +. +..+++|+.|++++|.+
T Consensus 138 ~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~----~~-~~~l~~L~~L~l~~n~l 211 (347)
T 4fmz_A 138 NLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDI----SP-LASLTSLHYFTAYVNQI 211 (347)
T ss_dssp ECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCC----GG-GGGCTTCCEEECCSSCC
T ss_pred ECCCCCCcccccchhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCccccc----cc-ccCCCccceeecccCCC
Confidence 99999655444458888899999998888776665 77888888888888665432 22 55666777777777776
Q ss_pred cccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCC
Q 001152 177 RYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1137)
Q Consensus 177 ~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L 256 (1137)
+.++. +..+++|+.|+|++|+++.+|. +..+++|+.|+|++|.++.++ .+..+++|+.|+|++|+++++ + .+..+
T Consensus 212 ~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~l~~n~l~~~-~-~~~~l 286 (347)
T 4fmz_A 212 TDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDIN-AVKDLTKLKMLNVGSNQISDI-S-VLNNL 286 (347)
T ss_dssp CCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCC-G-GGGGC
T ss_pred CCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCCh-hHhcCCCcCEEEccCCccCCC-h-hhcCC
Confidence 65554 5666677777777777766664 666667777777777666653 466666677777777766665 2 46666
Q ss_pred CCCCEEEccCCcCCCC-----CCCCcchhhccCCCCCCC
Q 001152 257 HNLQNLNLQYNKLLSY-----CQVPSWICCNLEGNGKDS 290 (1137)
Q Consensus 257 ~~L~~L~Ls~N~L~~~-----~~iP~~~~~~l~~n~l~~ 290 (1137)
++|+.|+|++|++++. ..+|....+++++|.+..
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 287 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp TTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 6677777777766542 123444445555555443
No 294
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=2.7e-25 Score=265.12 Aligned_cols=227 Identities=19% Similarity=0.156 Sum_probs=187.7
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L 96 (1137)
+.++.|.+..|+|+.++ .|..+++|++|+|++|+|++. | ++.+++|++|+|++|.|+.+| |+++++|++|
T Consensus 42 ~~L~~L~Ls~n~l~~~~--~l~~l~~L~~L~Ls~n~l~~~-~-----~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L 111 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDMT--GIEKLTGLTKLICTSNNITTL-D-----LSQNTNLTYLACDSNKLTNLD--VTPLTKLTYL 111 (457)
T ss_dssp TTCCEEECCSSCCCCCT--TGGGCTTCSEEECCSSCCSCC-C-----CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEE
T ss_pred CCCCEEEccCCCcccCh--hhcccCCCCEEEccCCcCCeE-c-----cccCCCCCEEECcCCCCceee--cCCCCcCCEE
Confidence 36788889999999874 688899999999999999885 2 345588999999999998886 8889999999
Q ss_pred EccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCC
Q 001152 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1137)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1137)
+|++|+|+.+| ++++++|+.|+|++|.+..++ +..+++|++|++++|.. .+.+ .+..+++|+.|++++|+|
T Consensus 112 ~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l~--l~~l~~L~~L~l~~n~~---~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 112 NCDTNKLTKLD--VSQNPLLTYLNCARNTLTEID--VSHNTQLTELDCHLNKK---ITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp ECCSSCCSCCC--CTTCTTCCEEECTTSCCSCCC--CTTCTTCCEEECTTCSC---CCCC--CCTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCeec--CCCCCcCCEEECCCCccceec--cccCCcCCEEECCCCCc---cccc--ccccCCcCCEEECCCCcc
Confidence 99999998886 888999999999999877764 78889999999998642 3333 367788999999999999
Q ss_pred cccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCC
Q 001152 177 RYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1137)
Q Consensus 177 ~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L 256 (1137)
+.+| ++.+++|+.|+|++|+|+.++ ++.+++|+.|+|++|+|+.+| ++.+++|+.|+|++|+|+++++ ..+
T Consensus 183 ~~l~--l~~l~~L~~L~l~~N~l~~~~--l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~~~---~~l 253 (457)
T 3bz5_A 183 TELD--VSQNKLLNRLNCDTNNITKLD--LNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTELDV---STL 253 (457)
T ss_dssp CCCC--CTTCTTCCEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCCC---TTC
T ss_pred ceec--cccCCCCCEEECcCCcCCeec--cccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCcCH---HHC
Confidence 9887 788899999999999999874 888899999999999999888 7888999999999999998764 455
Q ss_pred CCCCEEEccCCcCCC
Q 001152 257 HNLQNLNLQYNKLLS 271 (1137)
Q Consensus 257 ~~L~~L~Ls~N~L~~ 271 (1137)
++|+.|++++|+|..
T Consensus 254 ~~L~~L~l~~n~L~~ 268 (457)
T 3bz5_A 254 SKLTTLHCIQTDLLE 268 (457)
T ss_dssp TTCCEEECTTCCCSC
T ss_pred CCCCEEeccCCCCCE
Confidence 666666666666654
No 295
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=1.9e-25 Score=266.33 Aligned_cols=236 Identities=22% Similarity=0.277 Sum_probs=132.3
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L 96 (1137)
+.++.|.+..|+|+.+.+ |.++++|++|+|++|.+++..+ ++ ++++|++|+|++|.++.+|. +.++++|++|
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~---~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L 139 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LA---NLTNLTGLTLFNNQITDIDP-LKNLTNLNRL 139 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GT---TCTTCCEEECCSSCCCCCGG-GTTCTTCSEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hc---CCCCCCEEECCCCCCCCChH-HcCCCCCCEE
Confidence 357777777777777765 7777777777777777776554 33 34777777777777777655 6777777777
Q ss_pred EccCCCCCcccc--------------------cccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccc
Q 001152 97 KFFGNEINLFPS--------------------EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTL 156 (1137)
Q Consensus 97 ~Ls~N~L~~lP~--------------------~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~l 156 (1137)
+|++|.++.+|. .+.++++|+.|++++|.+..++ .+..+++|++|++++|.+....
T Consensus 140 ~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~--- 215 (466)
T 1o6v_A 140 ELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDIS-VLAKLTNLESLIATNNQISDIT--- 215 (466)
T ss_dssp EEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCG---
T ss_pred ECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCCh-hhccCCCCCEEEecCCcccccc---
Confidence 777777665543 1233344444444444433332 2344444444444443332211
Q ss_pred hhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCC
Q 001152 157 LSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLE 236 (1137)
Q Consensus 157 p~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~ 236 (1137)
| ++.+++|+.|++++|.++.++ .+..+++|+.|+|++|+++.++. +..+++|+.|+|++|.++.+|. +..+++|+
T Consensus 216 ~--~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~ 290 (466)
T 1o6v_A 216 P--LGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP-LAGLTALT 290 (466)
T ss_dssp G--GGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG-GTTCTTCS
T ss_pred c--ccccCCCCEEECCCCCcccch-hhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc-ccCCCccC
Confidence 1 334445555555555554442 34455555555555555554443 5555555555555555555544 55555555
Q ss_pred EEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 237 ~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
.|+|++|+++++++ +..+++|+.|+|++|++++
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSC
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCC
Confidence 55555555555543 4555555555555555554
No 296
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.94 E-value=2.2e-25 Score=277.43 Aligned_cols=306 Identities=20% Similarity=0.138 Sum_probs=161.0
Q ss_pred CcccccCCCCCCcccCCCCCCCCCC--CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCc
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDD--DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLR 94 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~--L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~ 94 (1137)
.++.|.+..|+++.+.+.+|.++.. |++|||++|++++..|..|+.+ ++|++|+|++|.++.+ |..|.++++|+
T Consensus 223 ~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 299 (680)
T 1ziw_A 223 SIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWL---PQLEYFFLEYNNIQHLFSHSLHGLFNVR 299 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTC---TTCCEEECCSCCBSEECTTTTTTCTTCC
T ss_pred cccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCc---ccccEeeCCCCccCccChhhhcCCCCcc
Confidence 3445555555555555555554433 5555555555554444433322 4555555555555433 23344444444
Q ss_pred EEEccCCCCC------cccc----cccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCC--------------
Q 001152 95 NLKFFGNEIN------LFPS----EVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPP-------------- 149 (1137)
Q Consensus 95 ~L~Ls~N~L~------~lP~----~l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~l-------------- 149 (1137)
+|+|++|... .+|. .|..+++|+.|+|++|.+..++ ..|.++++|++|++++|.+
T Consensus 300 ~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~ 379 (680)
T 1ziw_A 300 YLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLA 379 (680)
T ss_dssp EEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGT
T ss_pred EEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccc
Confidence 4444433222 2221 2333444444444444422221 2233333444443333210
Q ss_pred -----------CCCcccchhhhcCCCCCcEEeccCCCCc-ccC-ccccCCCCCCEEEccCCCCC----------------
Q 001152 150 -----------RPSVLTLLSEIAGLKCLTKLSVCHFSIR-YLP-PEIGCLSNLEQLDLSFNKMK---------------- 200 (1137)
Q Consensus 150 -----------n~~~~~lp~~l~~L~~L~~L~Ls~N~L~-~IP-~~l~~L~~L~~L~Ls~N~L~---------------- 200 (1137)
+......|..+..+++|+.|++++|.++ .+| ..|..+++|++|+|++|+++
T Consensus 380 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L 459 (680)
T 1ziw_A 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRL 459 (680)
T ss_dssp TSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEE
T ss_pred cCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccc
Confidence 1112223444555555555555555554 344 24455555555555555443
Q ss_pred -----------ccchhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCCCCc--------ccccCCCCCC
Q 001152 201 -----------YLPTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGS--------LDLCLMHNLQ 260 (1137)
Q Consensus 201 -----------~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~~p--------~~l~~L~~L~ 260 (1137)
.+|..|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|+|+++++ ..|..+++|+
T Consensus 460 ~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~ 539 (680)
T 1ziw_A 460 MLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLH 539 (680)
T ss_dssp ECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCC
T ss_pred hhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCC
Confidence 3456666777777777777777766543 5667777777777777775422 2356777777
Q ss_pred EEEccCCcCCCCC-----CCCcchhhccCCCCCCCCC-------CCcccccccccccCCCc-------ccCCCCCcccCC
Q 001152 261 NLNLQYNKLLSYC-----QVPSWICCNLEGNGKDSSN-------DDFISSSAEMDVYEGPM-------LENDGNVSFSGS 321 (1137)
Q Consensus 261 ~L~Ls~N~L~~~~-----~iP~~~~~~l~~n~l~~~~-------~~l~~~~~s~n~l~g~i-------l~~~~~~sf~GN 321 (1137)
.|+|++|+|+.++ .++....+++++|.+...+ ..+...++++|.+++.. +.++....++||
T Consensus 540 ~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N 619 (680)
T 1ziw_A 540 ILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFN 619 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTC
T ss_pred EEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCC
Confidence 7777777776532 2334444667777665433 34556677788777754 345566678899
Q ss_pred CCCCc
Q 001152 322 RHTSS 326 (1137)
Q Consensus 322 ~~lC~ 326 (1137)
|+.|.
T Consensus 620 ~~~c~ 624 (680)
T 1ziw_A 620 PFDCT 624 (680)
T ss_dssp CCCBC
T ss_pred CcccC
Confidence 99993
No 297
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=3.2e-25 Score=264.41 Aligned_cols=265 Identities=18% Similarity=0.103 Sum_probs=171.4
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L 96 (1137)
+.++.|.+..|+|+.++ |..+++|++|+|++|+|++. + ++++++|++|+|++|.|+.+| ++.+++|++|
T Consensus 64 ~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~-~-----~~~l~~L~~L~L~~N~l~~l~--~~~l~~L~~L 132 (457)
T 3bz5_A 64 TGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL-D-----VTPLTKLTYLNCDTNKLTKLD--VSQNPLLTYL 132 (457)
T ss_dssp TTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC-C-----CTTCTTCCEEECCSSCCSCCC--CTTCTTCCEE
T ss_pred CCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee-e-----cCCCCcCCEEECCCCcCCeec--CCCCCcCCEE
Confidence 47889999999999983 88999999999999999885 2 455689999999999999886 8899999999
Q ss_pred EccCCCCCcccccccCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCC
Q 001152 97 KFFGNEINLFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1137)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~-~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1137)
+|++|+|+.+| ++++++|+.|++++|. ++.+ .+..+++|+.|++++|.+.. +| +..+++|+.|++++|+
T Consensus 133 ~l~~N~l~~l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~----l~--l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 133 NCARNTLTEID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE----LD--VSQNKLLNRLNCDTNN 202 (457)
T ss_dssp ECTTSCCSCCC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC----CC--CTTCTTCCEEECCSSC
T ss_pred ECCCCccceec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce----ec--cccCCCCCEEECcCCc
Confidence 99999998875 7778888888888774 4444 36677777777777765543 22 4556666666666666
Q ss_pred CcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCcc-c-------------------------
Q 001152 176 IRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSG-L------------------------- 229 (1137)
Q Consensus 176 L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~-l------------------------- 229 (1137)
++.++ ++.+++|++|+|++|+|+.+| ++.+++|+.|+|++|+|+.+|.. +
T Consensus 203 l~~~~--l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~ 278 (457)
T 3bz5_A 203 ITKLD--LNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLI 278 (457)
T ss_dssp CSCCC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCC
T ss_pred CCeec--cccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCC
Confidence 66552 556666666666666666655 55566666666666666544421 1
Q ss_pred ----cCCCCCCEEeccCCcCCCCCcc--------cccCCCCCCEEEccCCcCCCC--CCCCcchhhccCCCCCCCCCCCc
Q 001152 230 ----YLLQRLENLDLSNNRLTSLGSL--------DLCLMHNLQNLNLQYNKLLSY--CQVPSWICCNLEGNGKDSSNDDF 295 (1137)
Q Consensus 230 ----~~L~~L~~LdLS~N~Lsg~~p~--------~l~~L~~L~~L~Ls~N~L~~~--~~iP~~~~~~l~~n~l~~~~~~l 295 (1137)
+.+++|+.|+|++|.+.+.+|. .+..+++|+.|+|++|+|+++ ..++....+++++|.+.. .+.+
T Consensus 279 ~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l~l~~l~~L~~L~l~~N~l~~-l~~L 357 (457)
T 3bz5_A 279 YFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELDVSHNTKLKSLSCVNAHIQD-FSSV 357 (457)
T ss_dssp EEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCSEEECCSSCCCB-CTTG
T ss_pred cccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccccccccCCcCcEEECCCCCCCC-cccc
Confidence 1224444444444443332221 234445666666666666653 122333344555555543 2334
Q ss_pred ccccccccccCC
Q 001152 296 ISSSAEMDVYEG 307 (1137)
Q Consensus 296 ~~~~~s~n~l~g 307 (1137)
.....+.|.+.|
T Consensus 358 ~~L~l~~n~l~g 369 (457)
T 3bz5_A 358 GKIPALNNNFEA 369 (457)
T ss_dssp GGSSGGGTSEEE
T ss_pred ccccccCCcEEe
Confidence 444444555544
No 298
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.93 E-value=4.6e-26 Score=291.30 Aligned_cols=282 Identities=15% Similarity=0.073 Sum_probs=223.1
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCcE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRN 95 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~~ 95 (1137)
+.++.|.+..|.|..+.+..|..+++|++|+|++|+|++..|..|..+ ++|++|+|++|.|+.+ |..|..+++|++
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGL---DNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTC---SSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCC---CCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 467888888888888888888888888888888888888877766544 8888888888888866 567888888888
Q ss_pred EEccCCCCCcccc-cccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCC
Q 001152 96 LKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1137)
Q Consensus 96 L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1137)
|+|++|.|+.++. .|.++++|+.|+|++|.+..++. +++|+.|++++|.+. .+|.. ..+|+.|++++|
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~----~~~L~~L~l~~N~l~----~l~~~---~~~l~~L~ls~N 411 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF----IPSIPDIFLSGNKLV----TLPKI---NLTANLIHLSEN 411 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS----CCSCSEEEEESCCCC----CCCCC---CTTCCEEECCSC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC----CCCcchhccCCCCcc----ccccc---ccccceeecccC
Confidence 8888888887754 47888888888888888765443 778888888886664 33332 456888999999
Q ss_pred CCcccCc--cccCCCCCCEEEccCCCCCccch--hhcCCCCCCEEEccCCCCCcc------CccccCCCCCCEEeccCCc
Q 001152 175 SIRYLPP--EIGCLSNLEQLDLSFNKMKYLPT--EICYLKALISLKVANNKLVEL------PSGLYLLQRLENLDLSNNR 244 (1137)
Q Consensus 175 ~L~~IP~--~l~~L~~L~~L~Ls~N~L~~LP~--~l~~L~~L~~L~Ls~N~Ls~I------P~~l~~L~~L~~LdLS~N~ 244 (1137)
+++.++. .+..+++|+.|+|++|+|+.++. .+..+++|+.|+|++|.++.+ |..+..+++|+.|+|++|+
T Consensus 412 ~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 491 (844)
T 3j0a_A 412 RLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNY 491 (844)
T ss_dssp CCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHH
T ss_pred ccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCc
Confidence 9987765 45689999999999999996653 356689999999999999743 3457789999999999999
Q ss_pred CCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCcccccccccccCCCcc---cCCCCCcccCC
Q 001152 245 LTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPML---ENDGNVSFSGS 321 (1137)
Q Consensus 245 Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~l~g~il---~~~~~~sf~GN 321 (1137)
|++++|..|..+++|+.|+|++|+|+++ |... ....+...++++|.+.+.+. ..+....++||
T Consensus 492 l~~~~~~~~~~l~~L~~L~Ls~N~l~~l---~~~~-----------~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~N 557 (844)
T 3j0a_A 492 LNSLPPGVFSHLTALRGLSLNSNRLTVL---SHND-----------LPANLEILDISRNQLLAPNPDVFVSLSVLDITHN 557 (844)
T ss_dssp HTTCCTTSSSSCCSCSEEEEESCCCSSC---CCCC-----------CCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEE
T ss_pred ccccChhHccchhhhheeECCCCCCCcc---Chhh-----------hhccccEEECCCCcCCCCChhHhCCcCEEEecCC
Confidence 9999998899999999999999999873 2211 11567788889999988774 34555577899
Q ss_pred CCCCc
Q 001152 322 RHTSS 326 (1137)
Q Consensus 322 ~~lC~ 326 (1137)
|+.|.
T Consensus 558 p~~C~ 562 (844)
T 3j0a_A 558 KFICE 562 (844)
T ss_dssp CCCCS
T ss_pred Ccccc
Confidence 99993
No 299
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.93 E-value=2.6e-25 Score=276.73 Aligned_cols=253 Identities=23% Similarity=0.195 Sum_probs=181.3
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCC--CcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCC
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFP--LIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKL 93 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~--~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L 93 (1137)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|.++.. ....|..+ ..++|+.|+|++|+++.+ |..|..+++|
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 407 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSL-AHSPLHILNLTKNKISKIESDAFSWLGHL 407 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGG-TTSCCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhccc-ccCcCceEECCCCCCCeEChhhhhCCCCC
Confidence 3688888888888888888888888888888888865432 22223222 124677788888878765 4567788888
Q ss_pred cEEEccCCCCC-ccc-ccccCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEe
Q 001152 94 RNLKFFGNEIN-LFP-SEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLS 170 (1137)
Q Consensus 94 ~~L~Ls~N~L~-~lP-~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~ 170 (1137)
++|+|++|.++ .+| ..+.++++|+.|+|++|.+. ..+..|..+++|+.|++++|.+.. .+.+|..+..+++|+.|+
T Consensus 408 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~p~~~~~l~~L~~L~ 486 (680)
T 1ziw_A 408 EVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN-VDSSPSPFQPLRNLTILD 486 (680)
T ss_dssp CEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBC-TTCSSCTTTTCTTCCEEE
T ss_pred CEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccc-cccCCcccccCCCCCEEE
Confidence 88888888886 465 45777888888888887743 334567777777777777765532 245666777777788888
Q ss_pred ccCCCCcccCc-cccCCCCCCEEEccCCCCCccch---------hhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEe
Q 001152 171 VCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPT---------EICYLKALISLKVANNKLVELPSG-LYLLQRLENLD 239 (1137)
Q Consensus 171 Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~---------~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~Ld 239 (1137)
+++|+|+.+|+ .|..+++|++|+|++|+|+.++. .+..+++|+.|+|++|+|+.||.. |.++++|+.|+
T Consensus 487 Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 566 (680)
T 1ziw_A 487 LSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIID 566 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeE
Confidence 88887776665 46777778888888887775432 256777778888888877777754 66677778888
Q ss_pred ccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 240 LS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
|++|+|+++++..|..+++|+.|+|++|+|++
T Consensus 567 Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 598 (680)
T 1ziw_A 567 LGLNNLNTLPASVFNNQVSLKSLNLQKNLITS 598 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCCCB
T ss_pred CCCCCCCcCCHhHhCCCCCCCEEECCCCcCCc
Confidence 88887777777667777777777777777776
No 300
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.5e-25 Score=272.22 Aligned_cols=306 Identities=17% Similarity=0.165 Sum_probs=224.5
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCcE
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRN 95 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~~ 95 (1137)
+.++.|.+..|+|+.+.+.+|.++++|++|+|++|.|++..|..|+.+ ++|++|+|++|.++.+|. .|+++++|++
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~~~l~~L~~ 128 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL---SSLQKLVAVETNLASLENFPIGHLKTLKE 128 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC---TTCCEEECTTSCCCCSTTCSCTTCTTCCE
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCc---cccccccccccccccCCCccccccccccE
Confidence 378889999999999988899999999999999999988877766544 888888888888888875 5888888888
Q ss_pred EEccCCCCCc--ccccccCCCCCCEEEccCCCCCCCc-ccccCCCCC----CEEECCCCCCCCC----------------
Q 001152 96 LKFFGNEINL--FPSEVGNLLGLECLQIKISSPGVNG-FALNKLKGL----KELELSKVPPRPS---------------- 152 (1137)
Q Consensus 96 L~Ls~N~L~~--lP~~l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L----~~L~Ls~n~ln~~---------------- 152 (1137)
|+|++|.++. +|..|+++++|+.|++++|.+..++ ..+..+.+| ..|++++|.+...
T Consensus 129 L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~ 208 (570)
T 2z63_A 129 LNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLR 208 (570)
T ss_dssp EECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEE
T ss_pred EecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecc
Confidence 8888888874 6888888888888888888754432 233333333 3333333221100
Q ss_pred --------------------------------------------------------------------------------
Q 001152 153 -------------------------------------------------------------------------------- 152 (1137)
Q Consensus 153 -------------------------------------------------------------------------------- 152 (1137)
T Consensus 209 ~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~ 288 (570)
T 2z63_A 209 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFS 288 (570)
T ss_dssp SCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEE
T ss_pred cccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEE
Confidence
Q ss_pred -----cccchhhh------------------------------------------cCCCCCcEEeccCCCCccc---Ccc
Q 001152 153 -----VLTLLSEI------------------------------------------AGLKCLTKLSVCHFSIRYL---PPE 182 (1137)
Q Consensus 153 -----~~~lp~~l------------------------------------------~~L~~L~~L~Ls~N~L~~I---P~~ 182 (1137)
...+|..+ ..+++|+.|++++|.++.+ |..
T Consensus 289 l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 368 (570)
T 2z63_A 289 LVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQS 368 (570)
T ss_dssp EESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHH
T ss_pred ecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCcccccccc
Confidence 00011100 3567888889999988855 567
Q ss_pred ccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccC--ccccCCCCCCEEeccCCcCCCCCcccccCCCCCC
Q 001152 183 IGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELP--SGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQ 260 (1137)
Q Consensus 183 l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP--~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~ 260 (1137)
+..+++|++|+|++|.++.+|..+..+++|+.|+|++|.++.++ ..+..+++|+.|+|++|++++.+|..+..+++|+
T Consensus 369 ~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 448 (570)
T 2z63_A 369 DFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE 448 (570)
T ss_dssp HHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred ccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCc
Confidence 78888999999999998888777888889999999998888553 3577888889999999988888888888888888
Q ss_pred EEEccCCcCCC------CCCCCcchhhccCCCCCCCC-------CCCcccccccccccCCCc------ccCCCCCcccCC
Q 001152 261 NLNLQYNKLLS------YCQVPSWICCNLEGNGKDSS-------NDDFISSSAEMDVYEGPM------LENDGNVSFSGS 321 (1137)
Q Consensus 261 ~L~Ls~N~L~~------~~~iP~~~~~~l~~n~l~~~-------~~~l~~~~~s~n~l~g~i------l~~~~~~sf~GN 321 (1137)
.|+|++|+++. +..+|..-.+++++|.+... .+.+...++++|.+.+.. +..+....++||
T Consensus 449 ~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 528 (570)
T 2z63_A 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528 (570)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCC
Confidence 88888888762 33455555567777765543 245677778888887754 233445577899
Q ss_pred CCCC
Q 001152 322 RHTS 325 (1137)
Q Consensus 322 ~~lC 325 (1137)
+..|
T Consensus 529 ~~~~ 532 (570)
T 2z63_A 529 PWDC 532 (570)
T ss_dssp CBCC
T ss_pred cccC
Confidence 9888
No 301
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.93 E-value=7.4e-25 Score=261.15 Aligned_cols=237 Identities=20% Similarity=0.239 Sum_probs=201.6
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-----------
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK----------- 85 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~----------- 85 (1137)
+.++.|.+..|+++.+.+ |.++++|++|+|++|++++..+ + .++++|++|+|++|.++.+|.
T Consensus 90 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~---~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~ 162 (466)
T 1o6v_A 90 TKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--L---KNLTNLNRLELSSNTISDISALSGLTSLQQLS 162 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--G---TTCTTCSEEEEEEEEECCCGGGTTCTTCSEEE
T ss_pred ccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--H---cCCCCCCEEECCCCccCCChhhccCCcccEee
Confidence 478888888999988876 8889999999999998887654 3 445888888888887776542
Q ss_pred ---------cccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccc
Q 001152 86 ---------SVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTL 156 (1137)
Q Consensus 86 ---------~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~l 156 (1137)
.+.++++|++|+|++|.++.++. +.++++|+.|++++|.+...+. +..+++|+.|++++|.+...
T Consensus 163 l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~---- 236 (466)
T 1o6v_A 163 FGNQVTDLKPLANLTTLERLDISSNKVSDISV-LAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDI---- 236 (466)
T ss_dssp EEESCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC----
T ss_pred cCCcccCchhhccCCCCCEEECcCCcCCCChh-hccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccc----
Confidence 26677889999999999998864 8899999999999999776655 78899999999999776543
Q ss_pred hhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCC
Q 001152 157 LSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLE 236 (1137)
Q Consensus 157 p~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~ 236 (1137)
..+..+++|+.|++++|.++.++. +..+++|+.|+|++|+++.+|. +..+++|+.|+|++|+++.+|. +..+++|+
T Consensus 237 -~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~ 312 (466)
T 1o6v_A 237 -GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP-ISNLKNLT 312 (466)
T ss_dssp -GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG-GGGCTTCS
T ss_pred -hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh-hcCCCCCC
Confidence 357789999999999999997766 8889999999999999998876 8889999999999999998876 78899999
Q ss_pred EEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCC
Q 001152 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSY 272 (1137)
Q Consensus 237 ~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~ 272 (1137)
.|+|++|++++.+| +..+++|+.|++++|+++++
T Consensus 313 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 313 YLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred EEECcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 99999999999876 78899999999999998874
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.93 E-value=6.2e-25 Score=246.62 Aligned_cols=219 Identities=21% Similarity=0.270 Sum_probs=194.8
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCCCCcEEEccCCCCCcc---cccccCCCCCCE
Q 001152 43 DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNLKFFGNEINLF---PSEVGNLLGLEC 118 (1137)
Q Consensus 43 L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~-~~~L~~L~~L~Ls~N~L~~l---P~~l~~L~~L~~ 118 (1137)
-+.+++++++++..+...+ ++|++|+|++|.++.+|.. |.++++|++|+|++|.|+.+ |..+..+++|++
T Consensus 9 ~~~l~c~~~~l~~ip~~~~------~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 9 GTEIRCNSKGLTSVPTGIP------SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTEEECCSSCCSSCCSCCC------TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCEEEcCCCCcccCCCCCC------CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 3579999999987654322 6899999999999999875 78999999999999999855 677888999999
Q ss_pred EEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccch--hhhcCCCCCcEEeccCCCCcc-cCccccCCCCCCEEEcc
Q 001152 119 LQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLL--SEIAGLKCLTKLSVCHFSIRY-LPPEIGCLSNLEQLDLS 195 (1137)
Q Consensus 119 L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp--~~l~~L~~L~~L~Ls~N~L~~-IP~~l~~L~~L~~L~Ls 195 (1137)
|+|++|.+..++..+..+++|++|++++|.+. .++ ..+..+++|++|++++|.++. +|..+..+++|++|+|+
T Consensus 83 L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 158 (306)
T 2z66_A 83 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK----QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 158 (306)
T ss_dssp EECCSCSEEEEEEEEETCTTCCEEECTTSEEE----SSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECT
T ss_pred EECCCCccccChhhcCCCCCCCEEECCCCccc----ccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECC
Confidence 99999998888888999999999999996543 333 468889999999999999984 45678999999999999
Q ss_pred CCCCCc--cchhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 196 FNKMKY--LPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 196 ~N~L~~--LP~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+|.++. +|..+..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++..+..+++|+.|+|++|++++
T Consensus 159 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 159 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred CCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcc
Confidence 999985 799999999999999999999976 6778899999999999999999998889999999999999999987
No 303
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=1.2e-26 Score=262.30 Aligned_cols=245 Identities=21% Similarity=0.174 Sum_probs=192.6
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCC-CCCCccccc----CCCCCCCccEEEeecCCCC-ccCccc--cC
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTV-DFPLIESYG----NRGGDNSVEGLYLYKNVLN-LIPKSV--GR 89 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L-~~~~p~~~~----~l~~L~~L~~L~Ls~N~L~-~IP~~~--~~ 89 (1137)
.++.+.+..|++ .++. .+... |+.|+|++|.| .+.+|..+. .+.++++|++|+|++|.++ .+|..+ ..
T Consensus 44 ~L~~l~l~~n~l-~~p~-~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE-ADLG-QFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT-CCCH-HHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc-ccHH-HHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 467777777888 4433 22222 88888999888 445555443 0013488999999999998 678876 88
Q ss_pred CCCCcEEEccCCCCCcccccccCC-----CCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhh--c
Q 001152 90 YEKLRNLKFFGNEINLFPSEVGNL-----LGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEI--A 161 (1137)
Q Consensus 90 L~~L~~L~Ls~N~L~~lP~~l~~L-----~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l--~ 161 (1137)
+++|++|+|++|+|+.+|..++.+ ++|++|+|++|.+..++ ..+..+++|++|+|++|.+.... .+|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER-GLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH-HHHHHSCTT
T ss_pred CCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch-HHHHHHHhc
Confidence 999999999999999888877776 89999999999977766 78889999999999996643221 134444 7
Q ss_pred CCCCCcEEeccCCCCcccC---c-cccCCCCCCEEEccCCCCCccc--hhhcCCCCCCEEEccCCCCCccCccccCCCCC
Q 001152 162 GLKCLTKLSVCHFSIRYLP---P-EIGCLSNLEQLDLSFNKMKYLP--TEICYLKALISLKVANNKLVELPSGLYLLQRL 235 (1137)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~IP---~-~l~~L~~L~~L~Ls~N~L~~LP--~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L 235 (1137)
.+++|++|++++|+|+.+| . .+..+++|++|+|++|+|+.++ ..+..+++|+.|+|++|+|+.||..+. ++|
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L 276 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP--AKL 276 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC--SEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc--CCc
Confidence 8899999999999998544 3 3367899999999999998654 456678999999999999999998887 889
Q ss_pred CEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 236 ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 236 ~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+.|+|++|+|+++ |. +..+++|+.|+|++|+|++
T Consensus 277 ~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 9999999999998 43 8899999999999999876
No 304
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.93 E-value=2.9e-24 Score=255.98 Aligned_cols=276 Identities=23% Similarity=0.229 Sum_probs=121.9
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~ 97 (1137)
.++.|.+..|+|+.++ .|.++++|++|+|++|+|++ +|..+ .+|++|+|++|.++.+| .|+++++|++|+
T Consensus 132 ~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~~N~l~~-lp~~~------~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 132 LLEYLGVSNNQLEKLP--ELQNSSFLKIIDVDNNSLKK-LPDLP------PSLEFIAAGNNQLEELP-ELQNLPFLTAIY 201 (454)
T ss_dssp TCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSC-CCCCC------TTCCEEECCSSCCSSCC-CCTTCTTCCEEE
T ss_pred CCCEEECcCCCCCCCc--ccCCCCCCCEEECCCCcCcc-cCCCc------ccccEEECcCCcCCcCc-cccCCCCCCEEE
Confidence 4455555555555443 35555555555555555554 22211 24555555555555554 355555555555
Q ss_pred ccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCc
Q 001152 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1137)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1137)
|++|+++.+|... .+|+.|++++|.+..+| .+..+++|++|++++|.+.. +|.. +++|+.|++++|+++
T Consensus 202 l~~N~l~~l~~~~---~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~----l~~~---~~~L~~L~l~~N~l~ 270 (454)
T 1jl5_A 202 ADNNSLKKLPDLP---LSLESIVAGNNILEELP-ELQNLPFLTTIYADNNLLKT----LPDL---PPSLEALNVRDNYLT 270 (454)
T ss_dssp CCSSCCSSCCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS----CCSC---CTTCCEEECCSSCCS
T ss_pred CCCCcCCcCCCCc---CcccEEECcCCcCCccc-ccCCCCCCCEEECCCCcCCc----cccc---ccccCEEECCCCccc
Confidence 5555555444322 34555555555544444 25555555555555544332 2211 234555555555555
Q ss_pred ccCccccCCCCCCEEEccCCCCCccch---hh-------------cCC-CCCCEEEccCCCCCccCccccCCCCCCEEec
Q 001152 178 YLPPEIGCLSNLEQLDLSFNKMKYLPT---EI-------------CYL-KALISLKVANNKLVELPSGLYLLQRLENLDL 240 (1137)
Q Consensus 178 ~IP~~l~~L~~L~~L~Ls~N~L~~LP~---~l-------------~~L-~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdL 240 (1137)
.+|.. +++|++|+|++|+|+.+|. .+ ..+ ++|+.|+|++|+++.+|.. +++|+.|+|
T Consensus 271 ~l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~L 344 (454)
T 1jl5_A 271 DLPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL---PPRLERLIA 344 (454)
T ss_dssp CCCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCCCCC---CTTCCEEEC
T ss_pred ccCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccccccc---CCcCCEEEC
Confidence 44432 2445555555555553321 11 112 3666666666666666654 366777777
Q ss_pred cCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhc----cCCCCCCCCCCCcccccccccccCC--CcccCCC
Q 001152 241 SNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCN----LEGNGKDSSNDDFISSSAEMDVYEG--PMLENDG 314 (1137)
Q Consensus 241 S~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~----l~~n~l~~~~~~l~~~~~s~n~l~g--~il~~~~ 314 (1137)
++|+|+++++ .+++|+.|+|++|++++++.+|.++.-. +.+..+. ....+...++++|.+.| .++..+.
T Consensus 345 ~~N~l~~lp~----~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~-~~~~L~~L~ls~N~l~~~~~iP~sl~ 419 (454)
T 1jl5_A 345 SFNHLAEVPE----LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPE-LPQNLKQLHVETNPLREFPDIPESVE 419 (454)
T ss_dssp CSSCCSCCCC----CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC----------------------------------
T ss_pred CCCccccccc----hhhhccEEECCCCCCCcCCCChHHHHhhhhccccccccc-ccCcCCEEECCCCcCCccccchhhHh
Confidence 7777776543 3567777777777777766666665421 1111111 12456777777777776 5555555
Q ss_pred CCcccCCCCCC
Q 001152 315 NVSFSGSRHTS 325 (1137)
Q Consensus 315 ~~sf~GN~~lC 325 (1137)
.-.+.+|...|
T Consensus 420 ~L~~~~~~~~~ 430 (454)
T 1jl5_A 420 DLRMNSERVVD 430 (454)
T ss_dssp -----------
T ss_pred heeCcCcccCC
Confidence 55555554444
No 305
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=5.7e-26 Score=257.35 Aligned_cols=238 Identities=17% Similarity=0.132 Sum_probs=201.3
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEEc
Q 001152 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKF 98 (1137)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~L 98 (1137)
+.-+.+..+++.......+..+++|++|||++|+|++..|..|..+ ++|++|+|++|.++.+++ |..+++|++|+|
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~L 87 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPF---TKLELLNLSSNVLYETLD-LESLSTLRTLDL 87 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTC---TTCCEEECTTSCCEEEEE-ETTCTTCCEEEC
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCC---CcCCEEECCCCcCCcchh-hhhcCCCCEEEC
Confidence 4445566777777767777888899999999999999888878655 899999999999997765 999999999999
Q ss_pred cCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcc
Q 001152 99 FGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1137)
Q Consensus 99 s~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1137)
++|.|+.+|. +++|+.|++++|.+..++. ..+++|++|++++|.+... .+..+..+++|+.|++++|.++.
T Consensus 88 s~n~l~~l~~----~~~L~~L~l~~n~l~~~~~--~~~~~L~~L~l~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~ 158 (317)
T 3o53_A 88 NNNYVQELLV----GPSIETLHAANNNISRVSC--SRGQGKKNIYLANNKITML---RDLDEGCRSRVQYLDLKLNEIDT 158 (317)
T ss_dssp CSSEEEEEEE----CTTCCEEECCSSCCSEEEE--CCCSSCEEEECCSSCCCSG---GGBCTGGGSSEEEEECTTSCCCE
T ss_pred cCCccccccC----CCCcCEEECCCCccCCcCc--cccCCCCEEECCCCCCCCc---cchhhhccCCCCEEECCCCCCCc
Confidence 9999987764 3899999999999776653 4578899999999766443 34467788999999999999996
Q ss_pred cC-ccc-cCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCC
Q 001152 179 LP-PEI-GCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1137)
Q Consensus 179 IP-~~l-~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L 256 (1137)
++ ..+ ..+++|++|+|++|+|+.+|. ...+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+|+++++ .+..+
T Consensus 159 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l~~-~~~~l 236 (317)
T 3o53_A 159 VNFAELAASSDTLEHLNLQYNFIYDVKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEK-ALRFS 236 (317)
T ss_dssp EEGGGGGGGTTTCCEEECTTSCCCEEEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECT-TCCCC
T ss_pred ccHHHHhhccCcCCEEECCCCcCccccc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccchhh-HhhcC
Confidence 54 455 478999999999999998874 445899999999999999999889999999999999999998754 78999
Q ss_pred CCCCEEEccCCcCCC
Q 001152 257 HNLQNLNLQYNKLLS 271 (1137)
Q Consensus 257 ~~L~~L~Ls~N~L~~ 271 (1137)
++|+.|+|++|++.|
T Consensus 237 ~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 237 QNLEHFDLRGNGFHC 251 (317)
T ss_dssp TTCCEEECTTCCCBH
T ss_pred CCCCEEEccCCCccC
Confidence 999999999999985
No 306
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=2.1e-26 Score=260.85 Aligned_cols=241 Identities=17% Similarity=0.128 Sum_probs=211.2
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcE
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~ 95 (1137)
.+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++.++ | ..+++|++|+|++|.|+.+|. +++|++
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~---~~l~~L~~L~Ls~n~l~~l~~----~~~L~~ 103 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--L---ESLSTLRTLDLNNNYVQELLV----GPSIET 103 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--E---TTCTTCCEEECCSSEEEEEEE----CTTCCE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--h---hhcCCCCEEECcCCccccccC----CCCcCE
Confidence 3479999999999999999999999999999999999988665 4 455999999999999998873 389999
Q ss_pred EEccCCCCCcccccccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhh-cCCCCCcEEeccC
Q 001152 96 LKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEI-AGLKCLTKLSVCH 173 (1137)
Q Consensus 96 L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l-~~L~~L~~L~Ls~ 173 (1137)
|+|++|.|+.++.. .+++|+.|+|++|.+..++ ..+..+++|++|++++|.+.. ..+..+ ..+++|+.|++++
T Consensus 104 L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~~l~~L~~L~L~~ 178 (317)
T 3o53_A 104 LHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT---VNFAELAASSDTLEHLNLQY 178 (317)
T ss_dssp EECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE---EEGGGGGGGTTTCCEEECTT
T ss_pred EECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc---ccHHHHhhccCcCCEEECCC
Confidence 99999999987654 4789999999999987765 578899999999999966543 334455 4789999999999
Q ss_pred CCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCC-CCCccc
Q 001152 174 FSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLT-SLGSLD 252 (1137)
Q Consensus 174 N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Ls-g~~p~~ 252 (1137)
|.|+.+|.. ..+++|++|+|++|+|+.+|..+..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|.++ +.++..
T Consensus 179 N~l~~~~~~-~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 257 (317)
T 3o53_A 179 NFIYDVKGQ-VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (317)
T ss_dssp SCCCEEECC-CCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHHHHHH
T ss_pred CcCcccccc-cccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcCHHHH
Confidence 999988654 458999999999999999998999999999999999999999999999999999999999999 777888
Q ss_pred ccCCCCCCEEEccCC-cCCC
Q 001152 253 LCLMHNLQNLNLQYN-KLLS 271 (1137)
Q Consensus 253 l~~L~~L~~L~Ls~N-~L~~ 271 (1137)
+..+++|+.|++++| .+++
T Consensus 258 ~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 258 FSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp HHTCHHHHHHHHHHHHHHHS
T ss_pred HhccccceEEECCCchhccC
Confidence 999999999999954 3444
No 307
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=7.7e-26 Score=271.85 Aligned_cols=220 Identities=18% Similarity=0.148 Sum_probs=182.9
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCC
Q 001152 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGL 116 (1137)
Q Consensus 37 f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L 116 (1137)
....++|++|+|++|+|++.+|..|+.+ ++|++|+|++|.|+.+++ |..+++|++|+|++|.|+.+|.. ++|
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~~----~~L 101 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQISAADLAPF---TKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLVG----PSI 101 (487)
T ss_dssp STTGGGCCEEECCSSCCCCCCGGGGTTC---TTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEEC----TTC
T ss_pred cccCCCccEEEeeCCcCCCCCHHHHhCC---CCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCCC----CCc
Confidence 3455589999999999999888777655 899999999999986655 88899999999999999877643 789
Q ss_pred CEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcc-cCcccc-CCCCCCEEEc
Q 001152 117 ECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY-LPPEIG-CLSNLEQLDL 194 (1137)
Q Consensus 117 ~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~-IP~~l~-~L~~L~~L~L 194 (1137)
+.|+|++|.+..++. ..+++|+.|+|++|.+.. ..|..++.+++|+.|+|++|.|+. +|..+. .+++|++|+|
T Consensus 102 ~~L~L~~N~l~~~~~--~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~L 176 (487)
T 3oja_A 102 ETLHAANNNISRVSC--SRGQGKKNIYLANNKITM---LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (487)
T ss_dssp CEEECCSSCCCCEEE--CCCSSCEEEECCSSCCCS---GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CEEECcCCcCCCCCc--cccCCCCEEECCCCCCCC---CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEec
Confidence 999999998777664 457889999999866543 345567788999999999999985 556665 7899999999
Q ss_pred cCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 195 SFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 195 s~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
++|.|+.+|. +..+++|+.|+|++|.|+.+|+.+..+++|+.|+|++|.|+++++ .+..+++|+.|+|++|++.|
T Consensus 177 s~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~-~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 177 QYNFIYDVKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEK-ALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp TTSCCCEEEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECT-TCCCCTTCCEEECTTCCBCH
T ss_pred CCCccccccc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccch-hhccCCCCCEEEcCCCCCcC
Confidence 9999998864 446899999999999999998888889999999999999998765 68889999999999999985
No 308
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=3.4e-25 Score=266.28 Aligned_cols=237 Identities=17% Similarity=0.130 Sum_probs=179.1
Q ss_pred CCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCC
Q 001152 14 PEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKL 93 (1137)
Q Consensus 14 ~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L 93 (1137)
...+.+..|.+..|+|+.+.+.+|.++++|++|+|++|.|++.+| ++.+++|++|+|++|.|+.+|.. ++|
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-----l~~l~~L~~L~Ls~N~l~~l~~~----~~L 101 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-----LESLSTLRTLDLNNNYVQELLVG----PSI 101 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-----CTTCTTCCEEECCSSEEEEEEEC----TTC
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-----cccCCCCCEEEecCCcCCCCCCC----CCc
Confidence 344468888888888888888888888888888888888877655 34558888888888888777643 678
Q ss_pred cEEEccCCCCCcccccccCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhc-CCCCCcEEec
Q 001152 94 RNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIA-GLKCLTKLSV 171 (1137)
Q Consensus 94 ~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~-~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~-~L~~L~~L~L 171 (1137)
++|+|++|.|+.+|.. .+++|+.|+|++|.+... |..+..+++|+.|+|++|.+. +..|..+. .+++|+.|+|
T Consensus 102 ~~L~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---~~~~~~l~~~l~~L~~L~L 176 (487)
T 3oja_A 102 ETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID---TVNFAELAASSDTLEHLNL 176 (487)
T ss_dssp CEEECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCC---EEEGGGGGGGTTTCCEEEC
T ss_pred CEEECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCC---CcChHHHhhhCCcccEEec
Confidence 8888888888876543 467788888888886655 456777888888888885443 33455654 6788888888
Q ss_pred cCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCC-CCCc
Q 001152 172 CHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLT-SLGS 250 (1137)
Q Consensus 172 s~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Ls-g~~p 250 (1137)
++|.|+.+|.. ..+++|++|+|++|+|+.+|+.++.+++|+.|+|++|.|+.||..+..+++|+.|+|++|.++ +.+|
T Consensus 177 s~N~l~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 177 QYNFIYDVKGQ-VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp TTSCCCEEECC-CCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred CCCcccccccc-ccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcchH
Confidence 88888877553 457888888888888888877788888888888888888888888888888888888888887 5555
Q ss_pred ccccCCCCCCEEEcc
Q 001152 251 LDLCLMHNLQNLNLQ 265 (1137)
Q Consensus 251 ~~l~~L~~L~~L~Ls 265 (1137)
..+..++.|+.|+++
T Consensus 256 ~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 256 DFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHHhCCCCcEEecc
Confidence 667777777766665
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.92 E-value=9.4e-25 Score=242.84 Aligned_cols=248 Identities=20% Similarity=0.190 Sum_probs=205.4
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCcEEEc
Q 001152 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKF 98 (1137)
Q Consensus 20 ~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~~L~L 98 (1137)
..+....+.++.++... .++|++|+|++|+|++..+..|..+ ++|++|+|++|.++.+ |..|.++++|++|+|
T Consensus 14 ~~~~c~~~~l~~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 87 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVGI---PAASQRIFLHGNRISHVPAASFRAC---RNLTILWLHSNVLARIDAAAFTGLALLEQLDL 87 (285)
T ss_dssp CEEECCSSCCSSCCTTC---CTTCSEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred eEEEcCcCCcccCCcCC---CCCceEEEeeCCcCCccCHHHcccC---CCCCEEECCCCccceeCHhhcCCccCCCEEeC
Confidence 45777888888886533 4689999999999999887767555 9999999999999987 678999999999999
Q ss_pred cCCC-CCcc-cccccCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCC
Q 001152 99 FGNE-INLF-PSEVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1137)
Q Consensus 99 s~N~-L~~l-P~~l~~L~~L~~L~Ls~N~~~~~-~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1137)
++|. ++.+ |..|.++++|++|+|++|.+..+ +..+..+++|++|++++|.+... .+..+..+++|+.|++++|+
T Consensus 88 ~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~l~~n~ 164 (285)
T 1ozn_A 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQAL---PDDTFRDLGNLTHLFLHGNR 164 (285)
T ss_dssp CSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC---CTTTTTTCTTCCEEECCSSC
T ss_pred CCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccccc---CHhHhccCCCccEEECCCCc
Confidence 9997 8877 67799999999999999997766 56789999999999999765432 23457889999999999999
Q ss_pred CcccCc-cccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCCCCccc
Q 001152 176 IRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLD 252 (1137)
Q Consensus 176 L~~IP~-~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~~p~~ 252 (1137)
|+.+|. .|..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|.++...+..
T Consensus 165 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 244 (285)
T 1ozn_A 165 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH
Confidence 998887 589999999999999999966 78899999999999999999988754 888999999999999998654421
Q ss_pred ccCCCCCCEEEccCCcCCCCCCCCcch
Q 001152 253 LCLMHNLQNLNLQYNKLLSYCQVPSWI 279 (1137)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~~~~iP~~~ 279 (1137)
..+..|+.+..+.|.+.| ..|..+
T Consensus 245 -~~~~~l~~~~~~~~~~~c--~~p~~l 268 (285)
T 1ozn_A 245 -PLWAWLQKFRGSSSEVPC--SLPQRL 268 (285)
T ss_dssp -HHHHHHHHCCSEECCCBE--EESGGG
T ss_pred -HHHHHHHhcccccCcccc--CCchHh
Confidence 112334555567777765 455543
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.92 E-value=3.6e-24 Score=253.38 Aligned_cols=224 Identities=21% Similarity=0.264 Sum_probs=199.9
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCc
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLR 94 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~ 94 (1137)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..+..|..+ ++|++|+|++|+|+.+|. .|..+++|+
T Consensus 63 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 139 (440)
T 3zyj_A 63 STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGL---ANLNTLELFDNRLTTIPNGAFVYLSKLK 139 (440)
T ss_dssp CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTC---SSCCEEECCSSCCSSCCTTTSCSCSSCC
T ss_pred CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCC---ccCCEEECCCCcCCeeCHhHhhccccCc
Confidence 3578999999999999999999999999999999999999888877655 999999999999999986 699999999
Q ss_pred EEEccCCCCCcccc-cccCCCCCCEEEccCCC-CCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEec
Q 001152 95 NLKFFGNEINLFPS-EVGNLLGLECLQIKISS-PGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1137)
Q Consensus 95 ~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~-~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~L 171 (1137)
+|+|++|.|+.+|. .|.++++|+.|+|++|+ +..++ ..|.++++|++|+|++|.+. .+| .+..+++|+.|+|
T Consensus 140 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~----~~~-~~~~l~~L~~L~L 214 (440)
T 3zyj_A 140 ELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR----EIP-NLTPLIKLDELDL 214 (440)
T ss_dssp EEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS----SCC-CCTTCSSCCEEEC
T ss_pred eeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc----ccc-ccCCCcccCEEEC
Confidence 99999999998866 58999999999999854 66555 47899999999999997665 344 4788999999999
Q ss_pred cCCCCccc-CccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCC
Q 001152 172 CHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 172 s~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg 247 (1137)
++|.|+.+ |..|..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|.+..
T Consensus 215 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 215 SGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 99999976 66899999999999999999966 56789999999999999999988765 5679999999999998863
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.92 E-value=3.9e-24 Score=253.94 Aligned_cols=224 Identities=21% Similarity=0.235 Sum_probs=199.5
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCCCCc
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLR 94 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~-~~~L~~L~ 94 (1137)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..+..|..+ ++|++|+|++|.|+.+|.. |.++++|+
T Consensus 74 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 150 (452)
T 3zyi_A 74 PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGL---ASLNTLELFDNWLTVIPSGAFEYLSKLR 150 (452)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC---TTCCEEECCSSCCSBCCTTTSSSCTTCC
T ss_pred CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCc---ccCCEEECCCCcCCccChhhhcccCCCC
Confidence 3579999999999999999999999999999999999999888777554 9999999999999999764 89999999
Q ss_pred EEEccCCCCCcccc-cccCCCCCCEEEccCC-CCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEec
Q 001152 95 NLKFFGNEINLFPS-EVGNLLGLECLQIKIS-SPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1137)
Q Consensus 95 ~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N-~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~L 171 (1137)
+|+|++|.|+.+|. .|.++++|+.|+|++| .++.++ ..|.++++|++|+|++|.+.. +| .+..+++|+.|+|
T Consensus 151 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~----~~-~~~~l~~L~~L~L 225 (452)
T 3zyi_A 151 ELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD----MP-NLTPLVGLEELEM 225 (452)
T ss_dssp EEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS----CC-CCTTCTTCCEEEC
T ss_pred EEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc----cc-cccccccccEEEC
Confidence 99999999998876 5899999999999984 466666 468999999999999977654 33 5788999999999
Q ss_pred cCCCCccc-CccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCC
Q 001152 172 CHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 172 s~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg 247 (1137)
++|.|+.+ |..|..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|.+..
T Consensus 226 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 226 SGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 99999976 56899999999999999999966 67789999999999999999988765 5679999999999998764
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=2.5e-25 Score=251.52 Aligned_cols=225 Identities=19% Similarity=0.114 Sum_probs=190.3
Q ss_pred cccccCCCCCCcccCCCC-CC-------CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCC
Q 001152 19 KEKLPSEANKINNEKNGS-VN-------DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRY 90 (1137)
Q Consensus 19 l~~L~~~~N~i~~l~~~~-f~-------~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L 90 (1137)
++.|.+..|+|+.+.... +. ++++|++|+|++|+|++.+|..+. ++.+++|++|+|++|+|+.+|..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL-EATGPDLNILNLRNVSWATRDAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS-SCCSCCCSEEEEESCBCSSSSSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH-HhcCCCccEEEccCCCCcchhHHHHHH
Confidence 788899999997654333 22 689999999999999998887541 245699999999999999889888877
Q ss_pred -----CCCcEEEccCCCCCccc-ccccCCCCCCEEEccCCCCCC---Cccc--ccCCCCCCEEECCCCCCCCCcccch-h
Q 001152 91 -----EKLRNLKFFGNEINLFP-SEVGNLLGLECLQIKISSPGV---NGFA--LNKLKGLKELELSKVPPRPSVLTLL-S 158 (1137)
Q Consensus 91 -----~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~~~~---~~~~--~~~L~~L~~L~Ls~n~ln~~~~~lp-~ 158 (1137)
++|++|+|++|+|+.+| ..|+++++|++|+|++|.+.. .+.. +..+++|++|+|++|.+.... .++ .
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~ 222 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPS-GVCSA 222 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHH-HHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchH-HHHHH
Confidence 89999999999999776 779999999999999998543 1223 389999999999998775332 333 3
Q ss_pred hhcCCCCCcEEeccCCCCcccC--ccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCC
Q 001152 159 EIAGLKCLTKLSVCHFSIRYLP--PEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLE 236 (1137)
Q Consensus 159 ~l~~L~~L~~L~Ls~N~L~~IP--~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~ 236 (1137)
.+..+++|+.|++++|+|+.++ ..+..+++|++|+|++|+|+.+|..+. ++|+.|+|++|+|+.+|. +..+++|+
T Consensus 223 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L~~L~Ls~N~l~~~p~-~~~l~~L~ 299 (312)
T 1wwl_A 223 LAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP--AKLSVLDLSYNRLDRNPS-PDELPQVG 299 (312)
T ss_dssp HHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC--SEEEEEECCSSCCCSCCC-TTTSCEEE
T ss_pred HHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc--CCceEEECCCCCCCCChh-HhhCCCCC
Confidence 4468899999999999999654 356778999999999999999998887 899999999999999987 88999999
Q ss_pred EEeccCCcCCCC
Q 001152 237 NLDLSNNRLTSL 248 (1137)
Q Consensus 237 ~LdLS~N~Lsg~ 248 (1137)
.|+|++|+|++.
T Consensus 300 ~L~L~~N~l~~~ 311 (312)
T 1wwl_A 300 NLSLKGNPFLDS 311 (312)
T ss_dssp EEECTTCTTTCC
T ss_pred EEeccCCCCCCC
Confidence 999999999874
No 313
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.92 E-value=4.9e-25 Score=252.93 Aligned_cols=224 Identities=20% Similarity=0.217 Sum_probs=190.0
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCcEEEccCCCCCcc-cccccCCCC
Q 001152 38 NDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLF-PSEVGNLLG 115 (1137)
Q Consensus 38 ~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~ 115 (1137)
...+...+.|+++|+++.++...+ ++|++|+|++|.++.+|. .|.++++|++|+|++|.|+.+ |..|.++++
T Consensus 28 ~~C~~~~~c~~~~~~l~~iP~~~~------~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 101 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLNSIPSGLT------EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGS 101 (353)
T ss_dssp CEECTTSEEECCSTTCSSCCTTCC------TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CCCCCCeEeeCCCCCccccccccc------ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCC
Confidence 344566679999999997654322 589999999999999976 799999999999999999977 556999999
Q ss_pred CCEEEccCCCCCCCccc-ccCCCCCCEEECCCCCCCCCcccchh--hhcCCCCCcEEeccCC-CCcccC-ccccCCCCCC
Q 001152 116 LECLQIKISSPGVNGFA-LNKLKGLKELELSKVPPRPSVLTLLS--EIAGLKCLTKLSVCHF-SIRYLP-PEIGCLSNLE 190 (1137)
Q Consensus 116 L~~L~Ls~N~~~~~~~~-~~~L~~L~~L~Ls~n~ln~~~~~lp~--~l~~L~~L~~L~Ls~N-~L~~IP-~~l~~L~~L~ 190 (1137)
|++|+|++|.+..++.. +.++++|++|++++|.+. .+|. .+..+++|+.|++++| .++.++ ..|..+++|+
T Consensus 102 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~----~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 102 LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK----TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp CCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS----SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc----ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 99999999998887755 899999999999997654 4454 6788999999999999 578775 5789999999
Q ss_pred EEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCcccc-CCCCCCEEeccCCcCCCCCcc-----------------
Q 001152 191 QLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGSL----------------- 251 (1137)
Q Consensus 191 ~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~~l~-~L~~L~~LdLS~N~Lsg~~p~----------------- 251 (1137)
+|+|++|+++.+ |..+..+++|+.|+|++|+++.+|..+. .+++|+.|+|++|++++.++.
T Consensus 178 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~ 257 (353)
T 2z80_A 178 ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFR 257 (353)
T ss_dssp EEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEE
T ss_pred EEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccc
Confidence 999999999965 8899999999999999999999987654 489999999999999986533
Q ss_pred --------------cccCCCCCCEEEccCCcCCC
Q 001152 252 --------------DLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 252 --------------~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
.+..+++|+.|+|++|+|+.
T Consensus 258 ~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (353)
T 2z80_A 258 NVKITDESLFQVMKLLNQISGLLELEFSRNQLKS 291 (353)
T ss_dssp SCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC
T ss_pred cccccCcchhhhHHHHhcccCCCEEECCCCCCCc
Confidence 35567777777777777764
No 314
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.91 E-value=1.3e-23 Score=257.28 Aligned_cols=147 Identities=18% Similarity=0.132 Sum_probs=121.5
Q ss_pred CCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCcEEEccCCC
Q 001152 24 SEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNE 102 (1137)
Q Consensus 24 ~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~ 102 (1137)
-...+++.++.+ + -+++++|||++|+|+++.+..|..+ ++|++|+|++|+|+.||+ .|.+|++|++|+|++|+
T Consensus 38 c~~~~l~~vP~~-l--p~~~~~LdLs~N~i~~l~~~~f~~l---~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 38 CMELNFYKIPDN-L--PFSTKNLDLSFNPLRHLGSYSFFSF---PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp CTTSCCSSCCSS-S--CTTCCEEECTTSCCCEECTTTTTTC---TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CCCCCcCccCCC-C--CcCCCEEEeeCCCCCCCCHHHHhCC---CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 345567777642 1 1479999999999999888777655 999999999999999975 69999999999999999
Q ss_pred CCcccc-cccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcc
Q 001152 103 INLFPS-EVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1137)
Q Consensus 103 L~~lP~-~l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1137)
|+.+|. .|.+|++|++|+|++|.+..++ ..|.+|++|++|+|++|.+... .+|..++.+++|++|++++|+|+.
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~--~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--KLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--CCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC--CCchhhccchhhhhhcccCccccc
Confidence 999976 5899999999999999988776 4699999999999999766432 346667778888888888777653
No 315
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=4.6e-24 Score=236.15 Aligned_cols=204 Identities=25% Similarity=0.258 Sum_probs=146.1
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCcEEEccCCCCCccc-ccccCCCCCCEE
Q 001152 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFP-SEVGNLLGLECL 119 (1137)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L 119 (1137)
+|++|+|++|+|++..+..|..+ ++|++|+|++|.++.+|. .|.++++|++|+|++|.|+.++ ..|.++++|+.|
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSF---PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTC---TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred CccEEECCCCcccccCHhHhccc---cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEE
Confidence 45556666665555544433332 555566665555555543 4555555556666555555443 335555555555
Q ss_pred EccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcc--cCccccCCCCCCEEEccCC
Q 001152 120 QIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY--LPPEIGCLSNLEQLDLSFN 197 (1137)
Q Consensus 120 ~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~--IP~~l~~L~~L~~L~Ls~N 197 (1137)
++++|.+..++ +..+..+++|++|++++|.++. +|..+..+++|++|+|++|
T Consensus 106 ~l~~n~l~~~~--------------------------~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N 159 (276)
T 2z62_A 106 VAVETNLASLE--------------------------NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (276)
T ss_dssp ECTTSCCCCST--------------------------TCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred ECCCCCccccC--------------------------chhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCC
Confidence 55544432221 1236677888899999998885 6888999999999999999
Q ss_pred CCCccc-hhhcCCCCCC----EEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCC
Q 001152 198 KMKYLP-TEICYLKALI----SLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSY 272 (1137)
Q Consensus 198 ~L~~LP-~~l~~L~~L~----~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~ 272 (1137)
+|+.+| ..+..+++|+ .|+|++|.++.+|.......+|+.|+|++|+|+++++..|..+++|+.|+|++|+|+|.
T Consensus 160 ~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 160 KIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred CCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 999775 4566666665 89999999999988888777999999999999999987889999999999999999997
Q ss_pred CC
Q 001152 273 CQ 274 (1137)
Q Consensus 273 ~~ 274 (1137)
|+
T Consensus 240 c~ 241 (276)
T 2z62_A 240 CP 241 (276)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 316
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=1.9e-24 Score=257.53 Aligned_cols=266 Identities=18% Similarity=0.142 Sum_probs=178.8
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCC----------CCccEEEeecCCCCccCccc
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGD----------NSVEGLYLYKNVLNLIPKSV 87 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L----------~~L~~L~Ls~N~L~~IP~~~ 87 (1137)
.++.|.+..|+|..+ |.+|.++++|++|+|++|+++|.+|..++.+..+ .+|++|+|++|.++.+|..
T Consensus 12 ~L~~L~l~~n~l~~i-P~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~- 89 (454)
T 1jl5_A 12 FLQEPLRHSSNLTEM-PVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL- 89 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC-
T ss_pred cchhhhcccCchhhC-ChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC-
Confidence 577888889999655 5678999999999999999988888877655211 1248888988888888763
Q ss_pred cCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc
Q 001152 88 GRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT 167 (1137)
Q Consensus 88 ~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~ 167 (1137)
.++|++|+|++|.++.+|.. +++|+.|++++|.+..++..+ ++|++|++++|.+. .+| .++++++|+
T Consensus 90 --~~~L~~L~l~~n~l~~lp~~---~~~L~~L~l~~n~l~~l~~~~---~~L~~L~L~~n~l~----~lp-~~~~l~~L~ 156 (454)
T 1jl5_A 90 --PPHLESLVASCNSLTELPEL---PQSLKSLLVDNNNLKALSDLP---PLLEYLGVSNNQLE----KLP-ELQNSSFLK 156 (454)
T ss_dssp --CTTCSEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCCSCC---TTCCEEECCSSCCS----SCC-CCTTCTTCC
T ss_pred --cCCCCEEEccCCcCCccccc---cCCCcEEECCCCccCcccCCC---CCCCEEECcCCCCC----CCc-ccCCCCCCC
Confidence 35788888888888888864 367888888888876655332 67888888886554 255 478888888
Q ss_pred EEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCC
Q 001152 168 KLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 168 ~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg 247 (1137)
+|++++|+++.+|..+ .+|++|+|++|+++.+| .++++++|+.|+|++|+++.+|... ++|+.|+|++|+++.
T Consensus 157 ~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~n~l~~ 229 (454)
T 1jl5_A 157 IIDVDNNSLKKLPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKKLPDLP---LSLESIVAGNNILEE 229 (454)
T ss_dssp EEECCSSCCSCCCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSSCCCCC---TTCCEEECCSSCCSS
T ss_pred EEECCCCcCcccCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCcCCCCc---CcccEEECcCCcCCc
Confidence 8888888888887643 47888888888888887 6888888888888888888777543 478888888888886
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCCCCcc-hhhccCCCCCCCC---CCCcccccccccccCC
Q 001152 248 LGSLDLCLMHNLQNLNLQYNKLLSYCQVPSW-ICCNLEGNGKDSS---NDDFISSSAEMDVYEG 307 (1137)
Q Consensus 248 ~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~-~~~~l~~n~l~~~---~~~l~~~~~s~n~l~g 307 (1137)
++ .+..+++|+.|++++|++++++..+.. ..+++++|.+..- ...+...++++|.+.+
T Consensus 230 lp--~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~N~l~~l~~~~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 230 LP--ELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSG 291 (454)
T ss_dssp CC--CCTTCTTCCEEECCSSCCSSCCSCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSE
T ss_pred cc--ccCCCCCCCEEECCCCcCCcccccccccCEEECCCCcccccCcccCcCCEEECcCCccCc
Confidence 54 377888888888888888875544332 2355666655442 2345556666666665
No 317
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1e-23 Score=236.32 Aligned_cols=210 Identities=25% Similarity=0.263 Sum_probs=151.9
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCCCCcEEEccCCCCCcccccccCCCC
Q 001152 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKFFGNEINLFPSEVGNLLG 115 (1137)
Q Consensus 37 f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~ 115 (1137)
+.++++++.|++++|+|+..++..+ ++|+.|+|++|.|+.+ |..|.++++|++|+|++|.|+.+|.. +.+++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~------~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~ 78 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP------KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPV 78 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC------TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTT
T ss_pred ccccCCccEEECCCCCCCcCCCCCC------CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCc
Confidence 4455566666666666654433211 3556666666666654 33456666666666666666655443 44455
Q ss_pred CCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEc
Q 001152 116 LECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDL 194 (1137)
Q Consensus 116 L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~L 194 (1137)
|+.|+|++|.+. .+|..+..+++|+.|++++|+|+.+|. .|..+++|++|+|
T Consensus 79 L~~L~Ls~N~l~---------------------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 79 LGTLDLSHNQLQ---------------------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp CCEEECCSSCCS---------------------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCEEECCCCcCC---------------------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 555555444432 344556678888999999999998875 6899999999999
Q ss_pred cCCCCCccchh-hcCCCCCCEEEccCCCCCccCccc-cCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCC
Q 001152 195 SFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGL-YLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSY 272 (1137)
Q Consensus 195 s~N~L~~LP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l-~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~ 272 (1137)
++|+|+.+|.. |..+++|+.|+|++|+|+.+|..+ ..+++|+.|+|++|+|+.+++ .+..+.+|+.|+|++|+|.|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~-~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPK-GFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCT-TTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccCh-hhcccccCCeEEeCCCCccCc
Confidence 99999988755 578999999999999999998765 569999999999999998765 677888999999999999998
Q ss_pred CCCCcchhh
Q 001152 273 CQVPSWICC 281 (1137)
Q Consensus 273 ~~iP~~~~~ 281 (1137)
|.+.....|
T Consensus 211 c~~~~l~~w 219 (290)
T 1p9a_G 211 CEILYFRRW 219 (290)
T ss_dssp GGGHHHHHH
T ss_pred CccHHHHHH
Confidence 876544333
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=2.7e-23 Score=256.39 Aligned_cols=239 Identities=24% Similarity=0.201 Sum_probs=151.8
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~ 97 (1137)
.+..|.+..|+|+.++. .+++|++|||++|+|+++.+ .+++|++|+|++|.|+.+|. .+++|+.|+
T Consensus 62 ~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~-------~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~ 127 (622)
T 3g06_A 62 HITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPV-------LPPGLLELSIFSNPLTHLPA---LPSGLCKLW 127 (622)
T ss_dssp TCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSCCCC-------CCTTCCEEEECSCCCCCCCC---CCTTCCEEE
T ss_pred CCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCcCCC-------CCCCCCEEECcCCcCCCCCC---CCCCcCEEE
Confidence 45555555666555544 34556666666666554322 22555666666666665554 344566666
Q ss_pred ccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCc
Q 001152 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1137)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1137)
|++|+|+.+|.. +++|++|+|++|.+..+|. .+.+|+.|++++|.+.. +| ..+++|+.|++++|.|+
T Consensus 128 L~~N~l~~lp~~---l~~L~~L~Ls~N~l~~l~~---~~~~L~~L~L~~N~l~~----l~---~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 128 IFGNQLTSLPVL---PPGLQELSVSDNQLASLPA---LPSELCKLWAYNNQLTS----LP---MLPSGLQELSVSDNQLA 194 (622)
T ss_dssp CCSSCCSCCCCC---CTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC----CC---CCCTTCCEEECCSSCCS
T ss_pred CCCCCCCcCCCC---CCCCCEEECcCCcCCCcCC---ccCCCCEEECCCCCCCC----Cc---ccCCCCcEEECCCCCCC
Confidence 666666655543 2556666666666554443 23455556665544432 23 23477888888888888
Q ss_pred ccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCCC
Q 001152 178 YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMH 257 (1137)
Q Consensus 178 ~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~ 257 (1137)
.+|.. +++|+.|+|++|.|+.+|.. +++|+.|+|++|+|+.|| ..+++|+.|+|++|+|+.+++ .++
T Consensus 195 ~l~~~---~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~~lp~----~~~ 261 (622)
T 3g06_A 195 SLPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLTSLPM----LPS 261 (622)
T ss_dssp CCCCC---CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC----CCT
T ss_pred CCCCc---cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCCcCCc----ccc
Confidence 77763 46788888888888877743 477889999999988888 446788999999999987765 568
Q ss_pred CCCEEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCcccccccccccCCCc
Q 001152 258 NLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPM 309 (1137)
Q Consensus 258 ~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~l~g~i 309 (1137)
+|+.|+|++|+|+. ||..+.. .+.+...++++|.+.+.+
T Consensus 262 ~L~~L~Ls~N~L~~---lp~~l~~----------l~~L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 262 GLLSLSVYRNQLTR---LPESLIH----------LSSETTVNLEGNPLSERT 300 (622)
T ss_dssp TCCEEECCSSCCCS---CCGGGGG----------SCTTCEEECCSCCCCHHH
T ss_pred cCcEEeCCCCCCCc---CCHHHhh----------ccccCEEEecCCCCCCcC
Confidence 89999999998874 5655442 233445555555555544
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=4.4e-23 Score=228.08 Aligned_cols=201 Identities=26% Similarity=0.362 Sum_probs=153.3
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCcEEEccCCCCCccccc-ccCCCCCCEE
Q 001152 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECL 119 (1137)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L 119 (1137)
+++++++++|+|+.++ ..+. ++|+.|+|++|.|+.+|. .|.++++|++|+|++|.|+.+|.. |.++++|++|
T Consensus 17 ~~~~l~~~~~~l~~ip-~~~~-----~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L 90 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIP-SNIP-----ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETL 90 (270)
T ss_dssp TTTEEECTTSCCSSCC-SCCC-----TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEE
T ss_pred CCCEEEccCCCCCccC-CCCC-----CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEE
Confidence 4566777777666533 2121 456667777776666654 566666677777777666666554 3556666666
Q ss_pred EccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCC
Q 001152 120 QIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNK 198 (1137)
Q Consensus 120 ~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~ 198 (1137)
+|++|.+..++ +..+..+++|+.|++++|+++.+|. .|..+++|++|+|++|+
T Consensus 91 ~l~~n~l~~~~--------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 91 WVTDNKLQALP--------------------------IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp ECCSSCCCCCC--------------------------TTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCC--------------------------HhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCc
Confidence 66555433222 2345678889999999999997766 57899999999999999
Q ss_pred CCccchh-hcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001152 199 MKYLPTE-ICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1137)
Q Consensus 199 L~~LP~~-l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1137)
|+.+|.. |..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|.
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9988865 78899999999999999988765 7789999999999999999998889999999999999999999876
No 320
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=1.3e-24 Score=264.30 Aligned_cols=201 Identities=18% Similarity=0.176 Sum_probs=144.7
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEecCCCCCCCC
Q 001152 805 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD 884 (1137)
Q Consensus 805 ~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~~~~~~~~~ 884 (1137)
...+.||+|+||.||+|.+.+..+++|....+.........+....++.+|++++++++||||+++..++...+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~------ 412 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD------ 412 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT------
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC------
Confidence 44578999999999999988899999986544333222223333456799999999999999995555544433
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeEeccccccC
Q 001152 885 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 964 (1137)
Q Consensus 885 g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLKP~NILld~~~~~~ 964 (1137)
+.||||||++|++|.++++. +..|+.||+.||+|||++||+||||||+|||++.
T Consensus 413 --------~~~lVmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~----- 466 (540)
T 3en9_A 413 --------NKRIMMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK----- 466 (540)
T ss_dssp --------TTEEEEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-----
T ss_pred --------ccEEEEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-----
Confidence 34999999999999998853 5689999999999999999999999999999984
Q ss_pred CCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001152 965 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1044 (1137)
Q Consensus 965 ~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG~~P 1044 (1137)
.+||+|||+++............. .......||+.|||||++.+.. ..|+..+|+|+..+-..+.+.++.+
T Consensus 467 ----~~kL~DFGla~~~~~~~~~~~~~~---~~~~~~~GT~~y~APEv~~~~~--~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 467 ----DLYIIDFGLGKISNLDEDKAVDLI---VFKKAVLSTHHEKFDEIWERFL--EGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp ----SEEECCCTTCEECCCHHHHHHHHH---HHHHHHHHHCGGGHHHHHHHHH--HHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred ----eEEEEECccCEECCCccccccchh---hhhhhhcCCCCcCCHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHhccc
Confidence 499999999987654221100000 0011357999999999997522 3467889999999888887777766
Q ss_pred CC
Q 001152 1045 YM 1046 (1137)
Q Consensus 1045 f~ 1046 (1137)
|.
T Consensus 538 Y~ 539 (540)
T 3en9_A 538 YV 539 (540)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=8.7e-23 Score=225.92 Aligned_cols=206 Identities=18% Similarity=0.188 Sum_probs=168.6
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCCCCc
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLR 94 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP-~~~~~L~~L~ 94 (1137)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..+..|..+ ++|++|+|++|.++.++ ..|.++++|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSL---SHLSTLILTGNPIQSLALGAFSGLSSLQ 103 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTC---TTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCC---cCCCEEECCCCccCccChhhhcCCcccc
Confidence 3579999999999999999999999999999999999998887766544 99999999999999876 5799999999
Q ss_pred EEEccCCCCCcccc-cccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccC
Q 001152 95 NLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1137)
Q Consensus 95 ~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1137)
+|+|++|.++.++. .++++++|+.|+|++|.+... .+|..+..+++|+.|++++
T Consensus 104 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------------------~l~~~~~~l~~L~~L~Ls~ 158 (276)
T 2z62_A 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF-------------------------KLPEYFSNLTNLEHLDLSS 158 (276)
T ss_dssp EEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC-------------------------CCCGGGGGCTTCCEEECCS
T ss_pred EEECCCCCccccCchhcccCCCCCEEECcCCcccee-------------------------cCchhhccCCCCCEEECCC
Confidence 99999999998865 588888888888887775431 1344566667777777777
Q ss_pred CCCcccCc-cccCCCCCC----EEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCC
Q 001152 174 FSIRYLPP-EIGCLSNLE----QLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 174 N~L~~IP~-~l~~L~~L~----~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg 247 (1137)
|+++.+|. .+..+.+|+ .|+|++|+|+.+|..+....+|+.|+|++|+|+.+|.. +..+++|+.|+|++|.+++
T Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp SCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 77776653 455555555 78899999988887776767899999999999988766 4678999999999998886
Q ss_pred CC
Q 001152 248 LG 249 (1137)
Q Consensus 248 ~~ 249 (1137)
..
T Consensus 239 ~c 240 (276)
T 2z62_A 239 SC 240 (276)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 322
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.1e-22 Score=228.00 Aligned_cols=197 Identities=19% Similarity=0.225 Sum_probs=168.4
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~ 97 (1137)
.+..+.+..|+|+.++...+ +++++|+|++|+|++..+..|..+ ++|+.|+|++|.|+.+|.. ..+++|++|+
T Consensus 11 ~l~~l~~~~~~l~~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~ 83 (290)
T 1p9a_G 11 SHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPY---TRLTQLNLDRAELTKLQVD-GTLPVLGTLD 83 (290)
T ss_dssp TCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTC---TTCCEEECTTSCCCEEECC-SCCTTCCEEE
T ss_pred CccEEECCCCCCCcCCCCCC---CCCCEEEcCCCcCCccCHHHhhcC---CCCCEEECCCCccCcccCC-CCCCcCCEEE
Confidence 68889999999999986654 689999999999999888877655 9999999999999998765 8899999999
Q ss_pred ccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCc
Q 001152 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1137)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1137)
|++|+|+.+|..+..+++|++|+|++|.+..++ |..|.++++|++|+|++|+|+
T Consensus 84 Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~--------------------------~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 84 LSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLP--------------------------LGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp CCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCC--------------------------SSTTTTCTTCCEEECTTSCCC
T ss_pred CCCCcCCcCchhhccCCCCCEEECCCCcCcccC--------------------------HHHHcCCCCCCEEECCCCCCC
Confidence 999999999998999999999999888765443 234566777888888888888
Q ss_pred ccCc-cccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCC
Q 001152 178 YLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 178 ~IP~-~l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg 247 (1137)
.+|. .|..+++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+|+.||..++.+.+|+.|+|++|.+..
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccC
Confidence 7776 457888999999999999988865 467899999999999999999998888899999999998874
No 323
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=9.5e-23 Score=230.31 Aligned_cols=195 Identities=22% Similarity=0.286 Sum_probs=123.3
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCC
Q 001152 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGL 116 (1137)
Q Consensus 37 f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L 116 (1137)
+.++++|++|+|++|+++.. + .+. .+++|++|+|++|.++.+|. +..+++|++|+|++|.|+.+| .+.++++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l-~-~~~---~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~-~~~~l~~L 109 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTTI-E-GVQ---YLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS-AIAGLQSI 109 (308)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGG---GCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG-GGTTCTTC
T ss_pred HHHcCCcCEEEeeCCCccCc-h-hhh---ccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCch-hhcCCCCC
Confidence 34455666666666666543 2 122 23566666666666665555 666666666666666666554 35555555
Q ss_pred CEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccC
Q 001152 117 ECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSF 196 (1137)
Q Consensus 117 ~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~ 196 (1137)
+.|+|++|.+..++ .+..+++|+.|++++|.++.+|. +..+++|++|+|++
T Consensus 110 ~~L~l~~n~l~~~~----------------------------~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~ 160 (308)
T 1h6u_A 110 KTLDLTSTQITDVT----------------------------PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGN 160 (308)
T ss_dssp CEEECTTSCCCCCG----------------------------GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCS
T ss_pred CEEECCCCCCCCch----------------------------hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccC
Confidence 55555555433322 25566667777777777766655 66677777777777
Q ss_pred CCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 197 NKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 197 N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
|+|+.+|. +..+++|+.|+|++|+++.+|. +..+++|+.|+|++|+|+++++ +..+++|+.|+|++|+|++
T Consensus 161 n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 161 AQVSDLTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp SCCCCCGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CcCCCChh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 77776665 6677777777777777776664 6667777777777777777653 6677777777777777765
No 324
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=6.3e-23 Score=231.40 Aligned_cols=228 Identities=19% Similarity=0.123 Sum_probs=181.2
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccc--cCCCCCcEEEccCCCCCc-cc----cccc
Q 001152 40 DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSV--GRYEKLRNLKFFGNEINL-FP----SEVG 111 (1137)
Q Consensus 40 l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~-~IP~~~--~~L~~L~~L~Ls~N~L~~-lP----~~l~ 111 (1137)
...++.|++.++.++...-..+..+..+++|++|+|++|.++ .+|..+ ..+++|++|+|++|.|+. +| ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 335788899888875321111111122367999999999998 557777 899999999999999984 33 3456
Q ss_pred CCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccc-hhhhcCCCCCcEEeccCCCCcccCcc----ccC
Q 001152 112 NLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTL-LSEIAGLKCLTKLSVCHFSIRYLPPE----IGC 185 (1137)
Q Consensus 112 ~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~l-p~~l~~L~~L~~L~Ls~N~L~~IP~~----l~~ 185 (1137)
.+++|++|+|++|.+...+ ..+..+++|++|+|++|.+....+.. +..+..+++|++|++++|+|+.+|.. ++.
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 7999999999999976655 67889999999999997653221111 12236889999999999999877663 578
Q ss_pred CCCCCEEEccCCCCCcc-chhhcCC---CCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCE
Q 001152 186 LSNLEQLDLSFNKMKYL-PTEICYL---KALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQN 261 (1137)
Q Consensus 186 L~~L~~L~Ls~N~L~~L-P~~l~~L---~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~ 261 (1137)
+++|++|+|++|+|+.+ |..++.+ ++|++|+|++|+|+.||..+. ++|+.|+|++|+|++++. +..+++|+.
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~~~--~~~l~~L~~ 298 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRAPQ--PDELPEVDN 298 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSCCC--TTSCCCCSC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCCch--hhhCCCccE
Confidence 89999999999999966 8888776 699999999999999999886 899999999999999843 788999999
Q ss_pred EEccCCcCCC
Q 001152 262 LNLQYNKLLS 271 (1137)
Q Consensus 262 L~Ls~N~L~~ 271 (1137)
|+|++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999875
No 325
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.88 E-value=3.1e-22 Score=246.91 Aligned_cols=226 Identities=22% Similarity=0.179 Sum_probs=196.1
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcE
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~ 95 (1137)
.+.++.|.+..|+|+.++. .+++|++|+|++|+|++..+ .+++|+.|+|++|+|+.||.. +++|++
T Consensus 80 l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~l~~-------~l~~L~~L~L~~N~l~~lp~~---l~~L~~ 145 (622)
T 3g06_A 80 PPELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTHLPA-------LPSGLCKLWIFGNQLTSLPVL---PPGLQE 145 (622)
T ss_dssp CTTCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCCCCC-------CCTTCCEEECCSSCCSCCCCC---CTTCCE
T ss_pred CCCCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCCCCC-------CCCCcCEEECCCCCCCcCCCC---CCCCCE
Confidence 4589999999999999876 78999999999999998654 237899999999999999975 478999
Q ss_pred EEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCC
Q 001152 96 LKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1137)
Q Consensus 96 L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1137)
|+|++|+|+.+|.. +.+|+.|+|++|.+..+| ..+++|+.|++++|.+.. +|.. +++|+.|++++|.
T Consensus 146 L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~~l~---~~~~~L~~L~Ls~N~l~~----l~~~---~~~L~~L~L~~N~ 212 (622)
T 3g06_A 146 LSVSDNQLASLPAL---PSELCKLWAYNNQLTSLP---MLPSGLQELSVSDNQLAS----LPTL---PSELYKLWAYNNR 212 (622)
T ss_dssp EECCSSCCSCCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC----CCCC---CTTCCEEECCSSC
T ss_pred EECcCCcCCCcCCc---cCCCCEEECCCCCCCCCc---ccCCCCcEEECCCCCCCC----CCCc---cchhhEEECcCCc
Confidence 99999999999864 468999999999988887 567899999999977654 3332 4789999999999
Q ss_pred CcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcccccC
Q 001152 176 IRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCL 255 (1137)
Q Consensus 176 L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~ 255 (1137)
|+.+|.. +++|+.|+|++|+|+.+| ..+++|+.|+|++|+|+.||. .+++|+.|+|++|+|+.++ ..|..
T Consensus 213 l~~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~~lp-~~l~~ 282 (622)
T 3g06_A 213 LTSLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLTRLP-ESLIH 282 (622)
T ss_dssp CSSCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCCSCC-GGGGG
T ss_pred ccccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCCcCC-HHHhh
Confidence 9999864 588999999999999999 557899999999999999998 6789999999999999775 57999
Q ss_pred CCCCCEEEccCCcCCCCCCCCcchh
Q 001152 256 MHNLQNLNLQYNKLLSYCQVPSWIC 280 (1137)
Q Consensus 256 L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1137)
+++|+.|+|++|+|++ .+|..+.
T Consensus 283 l~~L~~L~L~~N~l~~--~~~~~l~ 305 (622)
T 3g06_A 283 LSSETTVNLEGNPLSE--RTLQALR 305 (622)
T ss_dssp SCTTCEEECCSCCCCH--HHHHHHH
T ss_pred ccccCEEEecCCCCCC--cCHHHHH
Confidence 9999999999999987 4455444
No 326
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=3.2e-22 Score=225.97 Aligned_cols=193 Identities=18% Similarity=0.216 Sum_probs=151.3
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~ 97 (1137)
.+..|.+..|+|+.+. .+..+++|++|+|++|+|++..+ + ..+++|++|+|++|.|+.+| .+..+++|++|+
T Consensus 42 ~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~---~~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 42 GITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--L---KNLTKITELELSGNPLKNVS-AIAGLQSIKTLD 113 (308)
T ss_dssp TCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--G---TTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEE
T ss_pred CcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--H---ccCCCCCEEEccCCcCCCch-hhcCCCCCCEEE
Confidence 6889999999999985 68999999999999999998765 4 45599999999999999986 699999999999
Q ss_pred ccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCc
Q 001152 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1137)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1137)
|++|.|+.+|. +..+++|+.|+|++|.+..++. +..+++|+.|++++|+++
T Consensus 114 l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~----------------------------l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 114 LTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP----------------------------LAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp CTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG----------------------------GGGCTTCCEEECCSSCCC
T ss_pred CCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc----------------------------ccCCCCccEEEccCCcCC
Confidence 99999999876 8999999999998887654442 344556666666666666
Q ss_pred ccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCc
Q 001152 178 YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1137)
Q Consensus 178 ~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p 250 (1137)
.+|. +..+++|+.|+|++|+|+.+|. +..+++|+.|+|++|+++.+|+ +..+++|+.|+|++|++++.+.
T Consensus 165 ~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 165 DLTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CCGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEECCCE
T ss_pred CChh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeecCCe
Confidence 6655 6667777777777777776664 6667777777777777776663 6667777777777777766543
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=1.5e-21 Score=215.88 Aligned_cols=199 Identities=23% Similarity=0.302 Sum_probs=164.9
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCCCCcEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNL 96 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~-~~~L~~L~~L 96 (1137)
....+.+..++|+.++.... ++|+.|+|++|+|++..+..|..+ ++|++|+|++|.|+.+|.. |.++++|++|
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L 90 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRL---TKLRLLYLNDNKLQTLPAGIFKELKNLETL 90 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCC---TTCSEEECCSSCCSCCCTTSSSSC---TTCCEEECCSSCCSCCCTTTTSSCTTCCEE
T ss_pred CCCEEEccCCCCCccCCCCC---CCCCEEECcCCCCCeeCHHHhcCC---CCCCEEECCCCccCeeChhhhcCCCCCCEE
Confidence 46779999999999875432 689999999999999887766555 9999999999999999875 6889999999
Q ss_pred EccCCCCCccccc-ccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCC
Q 001152 97 KFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1137)
Q Consensus 97 ~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1137)
+|++|.|+.+|.. |.++++|+.|+|++|.+..++ +..|..+++|++|++++|.
T Consensus 91 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------------------~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 91 WVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLP--------------------------PRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp ECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCC--------------------------TTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCCHhHcccccCCCEEECCCCccCeeC--------------------------HHHhCcCcCCCEEECCCCc
Confidence 9999999988764 678888888888877754433 2235667788888888888
Q ss_pred CcccCcc-ccCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCCC
Q 001152 176 IRYLPPE-IGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSL 248 (1137)
Q Consensus 176 L~~IP~~-l~~L~~L~~L~Ls~N~L~~LP~-~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~ 248 (1137)
|+.+|.. |..+++|+.|+|++|+|+.+|. .|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|.+...
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 8887764 7888999999999999998875 478889999999999999988765 66789999999999988754
No 328
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=4.3e-22 Score=224.57 Aligned_cols=203 Identities=17% Similarity=0.133 Sum_probs=169.8
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCc-cC----ccccCCCCCcEEEccCCCCCccc-ccccCC
Q 001152 40 DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNL-IP----KSVGRYEKLRNLKFFGNEINLFP-SEVGNL 113 (1137)
Q Consensus 40 l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~-IP----~~~~~L~~L~~L~Ls~N~L~~lP-~~l~~L 113 (1137)
+++|++|+|++|++++..|..+.. ..+++|++|+|++|.++. +| ..+..+++|++|+|++|.|+.+| ..|+++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~-~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLE-ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSS-CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred cCceeEEEeeCCEeccchhhhhhh-ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 456999999999999999886611 455999999999999984 33 34568999999999999999765 678999
Q ss_pred CCCCEEEccCCCCCC---C--cccccCCCCCCEEECCCCCCCCCcccchhh-hcCCCCCcEEeccCCCCccc-CccccCC
Q 001152 114 LGLECLQIKISSPGV---N--GFALNKLKGLKELELSKVPPRPSVLTLLSE-IAGLKCLTKLSVCHFSIRYL-PPEIGCL 186 (1137)
Q Consensus 114 ~~L~~L~Ls~N~~~~---~--~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~-l~~L~~L~~L~Ls~N~L~~I-P~~l~~L 186 (1137)
++|++|+|++|.+.. + +..+..+++|++|+|++|.+.... ..+.. +..+++|++|+|++|+|+.+ |..++.+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPT-GVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHH-HHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchH-HHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 999999999998542 2 233478999999999998774322 22333 57889999999999999965 8877776
Q ss_pred ---CCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCC
Q 001152 187 ---SNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 187 ---~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg 247 (1137)
++|++|+|++|+|+.+|..+. ++|+.|+|++|+|+.+|. +..+++|+.|+|++|+|+.
T Consensus 248 ~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRAPQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSCCC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCCch-hhhCCCccEEECcCCCCCC
Confidence 699999999999999998875 799999999999999876 7889999999999999985
No 329
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.7e-23 Score=243.11 Aligned_cols=237 Identities=19% Similarity=0.164 Sum_probs=193.8
Q ss_pred CCCCCCCCCCEEEccCCCCCCCCccccc-CCCCCCCccEEEeecCCCC----ccCccc-------cCCCCCcEEEccCCC
Q 001152 35 GSVNDDDDDSVIDVSGKTVDFPLIESYG-NRGGDNSVEGLYLYKNVLN----LIPKSV-------GRYEKLRNLKFFGNE 102 (1137)
Q Consensus 35 ~~f~~l~~L~~LdLs~N~L~~~~p~~~~-~l~~L~~L~~L~Ls~N~L~----~IP~~~-------~~L~~L~~L~Ls~N~ 102 (1137)
..+..+++|++|+|++|+|+...+..+. .+..+++|++|+|++|.+. .+|..+ ..+++|++|+|++|.
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3456788999999999999887555432 2456699999999997665 445544 788999999999999
Q ss_pred CCc-----ccccccCCCCCCEEEccCCCCCCCc-----ccccCC---------CCCCEEECCCCCCC-CCcccchhhhcC
Q 001152 103 INL-----FPSEVGNLLGLECLQIKISSPGVNG-----FALNKL---------KGLKELELSKVPPR-PSVLTLLSEIAG 162 (1137)
Q Consensus 103 L~~-----lP~~l~~L~~L~~L~Ls~N~~~~~~-----~~~~~L---------~~L~~L~Ls~n~ln-~~~~~lp~~l~~ 162 (1137)
|+. +|..+.++++|++|+|++|.++..+ ..+..+ ++|++|+|++|.+. .....+...+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 985 7888999999999999999875332 233344 89999999997765 233333467788
Q ss_pred CCCCcEEeccCCCCc------ccCccccCCCCCCEEEccCCCC-----CccchhhcCCCCCCEEEccCCCCCc-----cC
Q 001152 163 LKCLTKLSVCHFSIR------YLPPEIGCLSNLEQLDLSFNKM-----KYLPTEICYLKALISLKVANNKLVE-----LP 226 (1137)
Q Consensus 163 L~~L~~L~Ls~N~L~------~IP~~l~~L~~L~~L~Ls~N~L-----~~LP~~l~~L~~L~~L~Ls~N~Ls~-----IP 226 (1137)
+++|+.|++++|+|+ .+|..+..+++|+.|+|++|.| ..+|..+..+++|+.|+|++|.|+. +|
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 999999999999998 2454788999999999999999 4689999999999999999999984 57
Q ss_pred ccc--cCCCCCCEEeccCCcCCC----CCcccc-cCCCCCCEEEccCCcCCC
Q 001152 227 SGL--YLLQRLENLDLSNNRLTS----LGSLDL-CLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 227 ~~l--~~L~~L~~LdLS~N~Lsg----~~p~~l-~~L~~L~~L~Ls~N~L~~ 271 (1137)
..+ +.+++|+.|+|++|.|++ .+|..+ .++++|+.|+|++|++++
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 777 449999999999999998 345566 678999999999999987
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=4.2e-22 Score=220.65 Aligned_cols=200 Identities=23% Similarity=0.275 Sum_probs=127.5
Q ss_pred CCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001152 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n 147 (1137)
++|+.|++++|.++.++ .+..+++|++|+|++|.|+.++ .+.++++|++|+|++|.+..++
T Consensus 41 ~~L~~L~l~~~~i~~~~-~l~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L~~n~l~~~~----------------- 101 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSVQ-GIQYLPNVRYLALGGNKLHDIS-ALKELTNLTYLILTGNQLQSLP----------------- 101 (272)
T ss_dssp TTCCEEECTTSCCCCCT-TGGGCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECTTSCCCCCC-----------------
T ss_pred cceeeeeeCCCCccccc-ccccCCCCcEEECCCCCCCCch-hhcCCCCCCEEECCCCccCccC-----------------
Confidence 55555555555555543 2555555555555555555543 4455555555555544433222
Q ss_pred CCCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCcc
Q 001152 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVEL 225 (1137)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~Ls~N~Ls~I 225 (1137)
+..+..+++|++|++++|+++.+|. .|+.+++|++|+|++|+|+.+|.. ++.+++|+.|+|++|+|+.+
T Consensus 102 ---------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 102 ---------NGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp ---------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ---------hhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 2234566777777777777776655 357777888888888887766644 56778888888888888766
Q ss_pred Ccc-ccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCcccccccccc
Q 001152 226 PSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDV 304 (1137)
Q Consensus 226 P~~-l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~ 304 (1137)
|.. +..+++|+.|+|++|+|+++++..+..+++|+.|+|++|++.|. +| .+..++...|.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--~~-----------------~l~~l~~~~n~ 233 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--CP-----------------GIRYLSEWINK 233 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC--TT-----------------TTHHHHHHHHH
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc--Cc-----------------HHHHHHHHHHh
Confidence 554 46678888888888888887776677788888888888887762 22 23344455566
Q ss_pred cCCCcccCCC
Q 001152 305 YEGPMLENDG 314 (1137)
Q Consensus 305 l~g~il~~~~ 314 (1137)
+.|.++..++
T Consensus 234 ~~g~ip~~~~ 243 (272)
T 3rfs_A 234 HSGVVRNSAG 243 (272)
T ss_dssp TGGGBBCTTS
T ss_pred CCCcccCccc
Confidence 6666655444
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=1.1e-21 Score=217.13 Aligned_cols=199 Identities=23% Similarity=0.224 Sum_probs=143.7
Q ss_pred CccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001152 69 SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1137)
Q Consensus 69 ~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ 148 (1137)
.+..+++..+.+..+ ..+..+++|+.|++++|.++.++. +..+++|++ |++++|.
T Consensus 20 ~l~~l~l~~~~~~~~-~~~~~l~~L~~L~l~~~~i~~~~~-l~~l~~L~~-----------------------L~l~~n~ 74 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA-VTQNELNSIDQIIANNSDIKSVQG-IQYLPNVRY-----------------------LALGGNK 74 (272)
T ss_dssp HHHHHHHTCSCTTSE-ECHHHHTTCCEEECTTSCCCCCTT-GGGCTTCCE-----------------------EECTTSC
T ss_pred HHHHHHhcCcccccc-cccccccceeeeeeCCCCcccccc-cccCCCCcE-----------------------EECCCCC
Confidence 344444555544433 123445556666666666555442 444455554 4555443
Q ss_pred CCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccC
Q 001152 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELP 226 (1137)
Q Consensus 149 ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~Ls~N~Ls~IP 226 (1137)
+.. + ..+..+++|++|++++|.++.+|. .|..+++|++|+|++|+|+.+|.. |+.+++|++|+|++|+|+.+|
T Consensus 75 l~~----~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 149 (272)
T 3rfs_A 75 LHD----I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLP 149 (272)
T ss_dssp CCC----C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCC----c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccC
Confidence 332 1 257788999999999999998876 468999999999999999988755 789999999999999999887
Q ss_pred cc-ccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCccccccccccc
Q 001152 227 SG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVY 305 (1137)
Q Consensus 227 ~~-l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~l 305 (1137)
.. +..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|+++. |..+. ..+.+...+++.|.+
T Consensus 150 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~----------~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 150 KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP--DGVFD----------RLTSLQYIWLHDNPW 217 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC--TTTTT----------TCTTCCEEECCSSCB
T ss_pred HHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccC--HHHHh----------CCcCCCEEEccCCCc
Confidence 65 578999999999999999999988899999999999999998732 21111 234556666666766
Q ss_pred CCCc
Q 001152 306 EGPM 309 (1137)
Q Consensus 306 ~g~i 309 (1137)
.+..
T Consensus 218 ~~~~ 221 (272)
T 3rfs_A 218 DCTC 221 (272)
T ss_dssp CCCT
T ss_pred cccC
Confidence 6653
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=1.3e-21 Score=212.00 Aligned_cols=193 Identities=15% Similarity=0.126 Sum_probs=141.1
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC-CCccCc-cccCCCCCcEEEccC-CCCCcccc-cccCCCCCC
Q 001152 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV-LNLIPK-SVGRYEKLRNLKFFG-NEINLFPS-EVGNLLGLE 117 (1137)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~-L~~IP~-~~~~L~~L~~L~Ls~-N~L~~lP~-~l~~L~~L~ 117 (1137)
+|++|+|++|+|++..+..|..+ ++|++|+|++|. ++.+|. .|.++++|++|+|++ |.|+.+|. .|.++++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l---~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~ 108 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNL---PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLK 108 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTC---TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCC
T ss_pred cccEEEEeCCcceEECHHHccCC---CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCC
Confidence 67777777777776666555443 777777777775 777664 567777777777776 77776653 466666777
Q ss_pred EEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc---EEeccCC-CCcccCc-cccCCCCCC-E
Q 001152 118 CLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT---KLSVCHF-SIRYLPP-EIGCLSNLE-Q 191 (1137)
Q Consensus 118 ~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~---~L~Ls~N-~L~~IP~-~l~~L~~L~-~ 191 (1137)
.|+|++|.+..+|. +..+++|+ .|++++| .++.+|. .|..+++|+ .
T Consensus 109 ~L~l~~n~l~~lp~----------------------------~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~ 160 (239)
T 2xwt_C 109 FLGIFNTGLKMFPD----------------------------LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLT 160 (239)
T ss_dssp EEEEEEECCCSCCC----------------------------CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEE
T ss_pred EEeCCCCCCccccc----------------------------cccccccccccEEECCCCcchhhcCcccccchhcceeE
Confidence 77666665444332 33445555 8888888 8887776 478888899 9
Q ss_pred EEccCCCCCccchhhcCCCCCCEEEccCCC-CCccCc-cccCC-CCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCc
Q 001152 192 LDLSFNKMKYLPTEICYLKALISLKVANNK-LVELPS-GLYLL-QRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNK 268 (1137)
Q Consensus 192 L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~-Ls~IP~-~l~~L-~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~ 268 (1137)
|+|++|+|+.+|......++|+.|+|++|+ |+.+|. .+..+ ++|+.|+|++|+|+++++. .+++|+.|++++|.
T Consensus 161 L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 161 LKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp EECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC-
T ss_pred EEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCcc
Confidence 999999998888766555889999999995 888865 46678 8899999999999988764 57788889888764
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=9.1e-22 Score=213.21 Aligned_cols=177 Identities=16% Similarity=0.194 Sum_probs=139.1
Q ss_pred CccEEEeecCCCCccCc-cccCCCCCcEEEccCCC-CCcccc-cccCCCCCCEEEccC-CCCCCCcccccCCCCCCEEEC
Q 001152 69 SVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNE-INLFPS-EVGNLLGLECLQIKI-SSPGVNGFALNKLKGLKELEL 144 (1137)
Q Consensus 69 ~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~-L~~lP~-~l~~L~~L~~L~Ls~-N~~~~~~~~~~~L~~L~~L~L 144 (1137)
+|++|+|++|+|+.+|. .|.++++|++|+|++|. ++.+|. .|.++++|++|+|++ |.+..++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~-------------- 97 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID-------------- 97 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC--------------
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC--------------
Confidence 56666666666666654 46666666666666664 665544 355555555555554 4432211
Q ss_pred CCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCC---EEEccCC-CCCccch-hhcCCCCCC-EEEcc
Q 001152 145 SKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLE---QLDLSFN-KMKYLPT-EICYLKALI-SLKVA 218 (1137)
Q Consensus 145 s~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~---~L~Ls~N-~L~~LP~-~l~~L~~L~-~L~Ls 218 (1137)
+..|.++++|++|++++|.++.+|. |..+++|+ +|+|++| +++.+|. .|..+++|+ .|+|+
T Consensus 98 ------------~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 98 ------------PDALKELPLLKFLGIFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp ------------TTSEECCTTCCEEEEEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred ------------HHHhCCCCCCCEEeCCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 2356778899999999999999998 88899998 9999999 9998875 488999999 99999
Q ss_pred CCCCCccCccccCCCCCCEEeccCCc-CCCCCcccccCC-CCCCEEEccCCcCCCC
Q 001152 219 NNKLVELPSGLYLLQRLENLDLSNNR-LTSLGSLDLCLM-HNLQNLNLQYNKLLSY 272 (1137)
Q Consensus 219 ~N~Ls~IP~~l~~L~~L~~LdLS~N~-Lsg~~p~~l~~L-~~L~~L~Ls~N~L~~~ 272 (1137)
+|+++.||...+..++|+.|+|++|+ |+++++..|..+ ++|+.|+|++|+|+.+
T Consensus 165 ~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l 220 (239)
T 2xwt_C 165 NNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL 220 (239)
T ss_dssp SCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC
T ss_pred CCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC
Confidence 99999999887777899999999995 999998889999 9999999999999873
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=3.9e-21 Score=210.19 Aligned_cols=179 Identities=21% Similarity=0.294 Sum_probs=140.7
Q ss_pred CccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccc-cccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001152 69 SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1137)
Q Consensus 69 ~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n 147 (1137)
+.+++++++|.++.+|..+. ++|+.|+|++|.|+.++. .|.++++|++|+|++|.+..++
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~----------------- 75 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS----------------- 75 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC-----------------
T ss_pred CCeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC-----------------
Confidence 45677777777777776655 467777777777775543 4666666666666665543222
Q ss_pred CCCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCcc
Q 001152 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVEL 225 (1137)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~Ls~N~Ls~I 225 (1137)
+..|..+++|++|+|++|+|+.+|. .|..+++|++|+|++|+|+.+|.. |..+++|+.|+|++|+|+.+
T Consensus 76 ---------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 76 ---------AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp ---------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ---------HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 2345667788888888888887765 568899999999999999988765 58899999999999999988
Q ss_pred Cc-cccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCC-CCC
Q 001152 226 PS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSY-CQV 275 (1137)
Q Consensus 226 P~-~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~-~~i 275 (1137)
|. .+..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|. |.+
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 198 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEI 198 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTH
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcccc
Confidence 77 588899999999999999999988899999999999999999986 543
No 335
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.2e-21 Score=236.81 Aligned_cols=185 Identities=19% Similarity=0.238 Sum_probs=105.9
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEc
Q 001152 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQI 121 (1137)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~L 121 (1137)
+|+.|+|++|+|++ +|..+ + ++|+.|+|++|.|+.|| ..+++|++|+|++|+|+.||. +.+ +|+.|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~---~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--P---PQITVLEITQNALISLP---ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--C---TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhH--c---CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCCcch-hhc--CCCEEEC
Confidence 56666666666665 33222 1 45666666666666666 334566666666666666655 443 5555555
Q ss_pred cCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCc
Q 001152 122 KISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKY 201 (1137)
Q Consensus 122 s~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~ 201 (1137)
++|.++.+|. .+++|+.|++++|.|+.||. .+++|+.|+|++|+|+.
T Consensus 128 s~N~l~~lp~------------------------------~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 128 DNNQLTMLPE------------------------------LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CSSCCSCCCC------------------------------CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC
T ss_pred CCCcCCCCCC------------------------------cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC
Confidence 5555443332 34556666666666666655 35566666666666666
Q ss_pred cchhhcCCCCCCEEEccCCCCCccCccccCCCCC-------CEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001152 202 LPTEICYLKALISLKVANNKLVELPSGLYLLQRL-------ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1137)
Q Consensus 202 LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L-------~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1137)
+|. |. ++|+.|+|++|+|+.||. +.. +| +.|+|++|+|+.+++ .+..+++|+.|+|++|+|++ .
T Consensus 175 lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~-~l~~l~~L~~L~L~~N~l~~--~ 245 (571)
T 3cvr_A 175 LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRITHIPE-NILSLDPTCTIILEDNPLSS--R 245 (571)
T ss_dssp CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCCCCCG-GGGGSCTTEEEECCSSSCCH--H
T ss_pred cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcceecCH-HHhcCCCCCEEEeeCCcCCC--c
Confidence 665 44 566666666666666665 443 45 666666666665543 45556666666666666665 4
Q ss_pred CCcchh
Q 001152 275 VPSWIC 280 (1137)
Q Consensus 275 iP~~~~ 280 (1137)
+|..+.
T Consensus 246 ~p~~l~ 251 (571)
T 3cvr_A 246 IRESLS 251 (571)
T ss_dssp HHHHHH
T ss_pred CHHHHH
Confidence 454444
No 336
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=7.9e-21 Score=231.89 Aligned_cols=180 Identities=22% Similarity=0.245 Sum_probs=130.9
Q ss_pred CCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEec
Q 001152 92 KLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1137)
Q Consensus 92 ~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~L 171 (1137)
+|+.|+|++|.|+.||..+. ++|+.|+|++|.+..+| ..+++|+.|+|++|.+.. +|. +.+ +|+.|+|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~----ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALISLP---ELPASLEYLDACDNRLST----LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC----CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCC----cch-hhc--CCCEEEC
Confidence 55556666665555555442 45566666655555544 335666666666654433 343 433 7999999
Q ss_pred cCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCCcc
Q 001152 172 CHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSL 251 (1137)
Q Consensus 172 s~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p~ 251 (1137)
++|.|+.||. .+++|+.|+|++|+|+.+|. .+++|+.|+|++|+|+.||. +. ++|+.|+|++|+|+.+++
T Consensus 128 s~N~l~~lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~~lp~- 197 (571)
T 3cvr_A 128 DNNQLTMLPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLESLPA- 197 (571)
T ss_dssp CSSCCSCCCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCSSCCC-
T ss_pred CCCcCCCCCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCCchhh-
Confidence 9999999998 68999999999999999997 67899999999999999998 66 899999999999997765
Q ss_pred cccCCCCC-------CEEEccCCcCCCCCCCCcchhhccCCCCCCCCCCCcccccccccccCCCc
Q 001152 252 DLCLMHNL-------QNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPM 309 (1137)
Q Consensus 252 ~l~~L~~L-------~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~l~~~~~s~n~l~g~i 309 (1137)
|.. +| +.|+|++|+|+. ||..+.. .+.+...++++|.+++.+
T Consensus 198 -~~~--~L~~~~~~L~~L~Ls~N~l~~---lp~~l~~----------l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 198 -VPV--RNHHSEETEIFFRCRENRITH---IPENILS----------LDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp -CC----------CCEEEECCSSCCCC---CCGGGGG----------SCTTEEEECCSSSCCHHH
T ss_pred -HHH--hhhcccccceEEecCCCccee---cCHHHhc----------CCCCCEEEeeCCcCCCcC
Confidence 544 77 999999999985 6665542 234555566666666654
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=7e-22 Score=229.45 Aligned_cols=234 Identities=15% Similarity=0.126 Sum_probs=192.8
Q ss_pred CCcccccCCCCCCcccCC----CCCCCCCCCCEEEccCC---CCCCCCccccc----CCCCCCCccEEEeecCCCCc---
Q 001152 17 PIKEKLPSEANKINNEKN----GSVNDDDDDSVIDVSGK---TVDFPLIESYG----NRGGDNSVEGLYLYKNVLNL--- 82 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~----~~f~~l~~L~~LdLs~N---~L~~~~p~~~~----~l~~L~~L~~L~Ls~N~L~~--- 82 (1137)
+.++.|.+..|+|+...+ ..|..+++|++|+|++| ++++.+|..+. .+..+++|++|+|++|.|+.
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 469999999999988754 34889999999999996 45556665442 12456999999999999986
Q ss_pred --cCccccCCCCCcEEEccCCCCCc-----ccccccCC---------CCCCEEEccCCCCC--CCc---ccccCCCCCCE
Q 001152 83 --IPKSVGRYEKLRNLKFFGNEINL-----FPSEVGNL---------LGLECLQIKISSPG--VNG---FALNKLKGLKE 141 (1137)
Q Consensus 83 --IP~~~~~L~~L~~L~Ls~N~L~~-----lP~~l~~L---------~~L~~L~Ls~N~~~--~~~---~~~~~L~~L~~ 141 (1137)
+|..|..+++|++|+|++|.|+. ++..+..+ ++|++|+|++|.++ ..+ ..+..+++|++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 78889999999999999999973 34444445 89999999999976 333 35678999999
Q ss_pred EECCCCCCCC--CcccchhhhcCCCCCcEEeccCCCC-----cccCccccCCCCCCEEEccCCCCCc-----cchhh--c
Q 001152 142 LELSKVPPRP--SVLTLLSEIAGLKCLTKLSVCHFSI-----RYLPPEIGCLSNLEQLDLSFNKMKY-----LPTEI--C 207 (1137)
Q Consensus 142 L~Ls~n~ln~--~~~~lp~~l~~L~~L~~L~Ls~N~L-----~~IP~~l~~L~~L~~L~Ls~N~L~~-----LP~~l--~ 207 (1137)
|+|++|.+.. ....+|..+..+++|+.|+|++|.| ..+|..+..+++|++|+|++|+|+. +|..+ +
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 271 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTC
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhc
Confidence 9999976642 1113444788999999999999999 5678889999999999999999983 57777 4
Q ss_pred CCCCCCEEEccCCCCCc-----cCccc-cCCCCCCEEeccCCcCCCCCc
Q 001152 208 YLKALISLKVANNKLVE-----LPSGL-YLLQRLENLDLSNNRLTSLGS 250 (1137)
Q Consensus 208 ~L~~L~~L~Ls~N~Ls~-----IP~~l-~~L~~L~~LdLS~N~Lsg~~p 250 (1137)
.+++|+.|+|++|.|+. +|..+ .++++|+.|+|++|+|++..+
T Consensus 272 ~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 272 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred cCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 49999999999999997 89888 568999999999999998875
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.83 E-value=1e-21 Score=226.58 Aligned_cols=247 Identities=13% Similarity=0.112 Sum_probs=188.0
Q ss_pred ccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCc----ccccCCCCCC-CccEEEeecCCCCcc-CccccCC-----
Q 001152 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLI----ESYGNRGGDN-SVEGLYLYKNVLNLI-PKSVGRY----- 90 (1137)
Q Consensus 22 L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p----~~~~~l~~L~-~L~~L~Ls~N~L~~I-P~~~~~L----- 90 (1137)
..+..|++++..+..+...++|++|||++|.|++..+ ..|..+ + +|++|+|++|.|+.. +..|..+
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~---~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 79 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANT---PASVTSLNLSGNSLGFKNSDELVQILAAIP 79 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTC---CTTCCEEECCSSCGGGSCHHHHHHHHHTSC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhC---CCceeEEECcCCCCCHHHHHHHHHHHhccC
Confidence 3466788888877777777789999999999988877 555544 7 899999999999865 4556554
Q ss_pred CCCcEEEccCCCCCccc-cc----ccCC-CCCCEEEccCCCCCCCcc-c----ccC-CCCCCEEECCCCCCCCCc-ccch
Q 001152 91 EKLRNLKFFGNEINLFP-SE----VGNL-LGLECLQIKISSPGVNGF-A----LNK-LKGLKELELSKVPPRPSV-LTLL 157 (1137)
Q Consensus 91 ~~L~~L~Ls~N~L~~lP-~~----l~~L-~~L~~L~Ls~N~~~~~~~-~----~~~-L~~L~~L~Ls~n~ln~~~-~~lp 157 (1137)
++|++|+|++|.|+..+ .. +..+ ++|+.|+|++|.++..+. . +.. .++|++|+|++|.+.... ..++
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 89999999999998543 33 4455 899999999999766553 2 334 368999999997654322 2455
Q ss_pred hhhcCCC-CCcEEeccCCCCcccCc-----cccCC-CCCCEEEccCCCCCc-----cchhhcC-CCCCCEEEccCCCCCc
Q 001152 158 SEIAGLK-CLTKLSVCHFSIRYLPP-----EIGCL-SNLEQLDLSFNKMKY-----LPTEICY-LKALISLKVANNKLVE 224 (1137)
Q Consensus 158 ~~l~~L~-~L~~L~Ls~N~L~~IP~-----~l~~L-~~L~~L~Ls~N~L~~-----LP~~l~~-L~~L~~L~Ls~N~Ls~ 224 (1137)
..+..++ +|+.|+|++|+|+..+. .+..+ ++|++|+|++|.|+. ++..+.. .++|+.|+|++|.|+.
T Consensus 160 ~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 160 QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 5666665 89999999999985543 34455 599999999999986 7777766 4589999999999986
Q ss_pred cCc-----cccCCCCCCEEeccCCcCCCCCcc-------cccCCCCCCEEEccCCcCCC
Q 001152 225 LPS-----GLYLLQRLENLDLSNNRLTSLGSL-------DLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 225 IP~-----~l~~L~~L~~LdLS~N~Lsg~~p~-------~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
++. .+..+++|+.|+|++|.+.++.+. .+..+++|+.|||++|++..
T Consensus 240 ~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 240 PSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp CCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 543 346688999999999997766543 46678889999999999876
No 339
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=4.5e-20 Score=211.88 Aligned_cols=235 Identities=16% Similarity=0.125 Sum_probs=169.3
Q ss_pred cccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCc-cccCCCCCcE-EE
Q 001152 21 KLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPK-SVGRYEKLRN-LK 97 (1137)
Q Consensus 21 ~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~-~IP~-~~~~L~~L~~-L~ 97 (1137)
.+....++|+.|+.+- .+++++|+|++|+|+.+.+.+|.++ ++|++|+|++|++. .||. .|.+|++|.. +.
T Consensus 13 ~v~C~~~~Lt~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l---~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 13 VFLCQESKVTEIPSDL---PRNAIELRFVLTKLRVIQKGAFSGF---GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp EEEEESTTCCSCCTTC---CTTCSEEEEESCCCSEECTTSSTTC---TTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred EEEecCCCCCccCcCc---CCCCCEEEccCCcCCCcCHHHHcCC---CCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 3455667777776433 2568888888888887666655444 88888888888874 5664 5778877654 66
Q ss_pred ccCCCCCccc-ccccCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchh-hhcCCC-CCcEEeccC
Q 001152 98 FFGNEINLFP-SEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLS-EIAGLK-CLTKLSVCH 173 (1137)
Q Consensus 98 Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~~~~~~-~~~~~L~~L~~L~Ls~n~ln~~~~~lp~-~l~~L~-~L~~L~Ls~ 173 (1137)
+.+|+|+.+| ..|.++++|++|++++|.+..++ ..+....++..|++.++ +.+..++. .+..+. .|+.|+|++
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~---~~i~~l~~~~f~~~~~~l~~L~L~~ 163 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN---INIHTIERNSFVGLSFESVILWLNK 163 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC---TTCCEECTTSSTTSBSSCEEEECCS
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc---cccccccccchhhcchhhhhhcccc
Confidence 6678888774 45788888888888888876655 34555666777777652 23334433 344443 588899999
Q ss_pred CCCcccCccccCCCCCCEEEccC-CCCCccch-hhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccC-CcCCCCCc
Q 001152 174 FSIRYLPPEIGCLSNLEQLDLSF-NKMKYLPT-EICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSN-NRLTSLGS 250 (1137)
Q Consensus 174 N~L~~IP~~l~~L~~L~~L~Ls~-N~L~~LP~-~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~-N~Lsg~~p 250 (1137)
|+|+.||..+....+|+.|+|++ |.++.||. .|..+++|+.|+|++|+|+.||... +.+|+.|.+.+ +.++.+|
T Consensus 164 N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~--~~~L~~L~~l~~~~l~~lP- 240 (350)
T 4ay9_X 164 NGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG--LENLKKLRARSTYNLKKLP- 240 (350)
T ss_dssp SCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS--CTTCCEEECTTCTTCCCCC-
T ss_pred ccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh--hccchHhhhccCCCcCcCC-
Confidence 99999988777778899999974 78889985 4688999999999999999998743 45666666544 4566665
Q ss_pred ccccCCCCCCEEEccCCc
Q 001152 251 LDLCLMHNLQNLNLQYNK 268 (1137)
Q Consensus 251 ~~l~~L~~L~~L~Ls~N~ 268 (1137)
.+..+++|+.+++.++.
T Consensus 241 -~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 241 -TLEKLVALMEASLTYPS 257 (350)
T ss_dssp -CTTTCCSCCEEECSCHH
T ss_pred -CchhCcChhhCcCCCCc
Confidence 47888999999997654
No 340
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.82 E-value=3.3e-22 Score=236.47 Aligned_cols=252 Identities=17% Similarity=0.095 Sum_probs=179.0
Q ss_pred CCcccccCCCCCCcccCCCCC-CCCC----CCCEEEccCCCCCC----CCcccccCCCCCCCccEEEeecCCCCcc-Ccc
Q 001152 17 PIKEKLPSEANKINNEKNGSV-NDDD----DDSVIDVSGKTVDF----PLIESYGNRGGDNSVEGLYLYKNVLNLI-PKS 86 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f-~~l~----~L~~LdLs~N~L~~----~~p~~~~~l~~L~~L~~L~Ls~N~L~~I-P~~ 86 (1137)
+.++.|.+..|+|+......+ ..+. +|++|+|++|+|+. .++..+.. +++|++|+|++|.++.. +..
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~---~~~L~~L~Ls~n~i~~~~~~~ 132 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRT---LPTLQELHLSDNLLGDAGLQL 132 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTS---CTTCCEEECCSSBCHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHcc---CCceeEEECCCCcCchHHHHH
Confidence 478899999998877544222 2344 69999999998874 44555544 48899999999988732 222
Q ss_pred c-----cCCCCCcEEEccCCCCCc-----ccccccCCCCCCEEEccCCCCCCCc-cccc-----CCCCCCEEECCCCCCC
Q 001152 87 V-----GRYEKLRNLKFFGNEINL-----FPSEVGNLLGLECLQIKISSPGVNG-FALN-----KLKGLKELELSKVPPR 150 (1137)
Q Consensus 87 ~-----~~L~~L~~L~Ls~N~L~~-----lP~~l~~L~~L~~L~Ls~N~~~~~~-~~~~-----~L~~L~~L~Ls~n~ln 150 (1137)
+ ..+++|++|+|++|.++. ++..+..+++|+.|+|++|.++..+ ..+. .+++|++|++++|.+.
T Consensus 133 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 212 (461)
T 1z7x_W 133 LCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVT 212 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCB
T ss_pred HHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCc
Confidence 2 235679999999998873 4666777889999999888755432 1121 3568899999886654
Q ss_pred CCc-ccchhhhcCCCCCcEEeccCCCCccc------CccccCCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEcc
Q 001152 151 PSV-LTLLSEIAGLKCLTKLSVCHFSIRYL------PPEIGCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKVA 218 (1137)
Q Consensus 151 ~~~-~~lp~~l~~L~~L~~L~Ls~N~L~~I------P~~l~~L~~L~~L~Ls~N~L~~-----LP~~l~~L~~L~~L~Ls 218 (1137)
... ..++..+..+++|+.|++++|.++.. +..+..+++|++|+|++|+|+. +|..+..+++|+.|+|+
T Consensus 213 ~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 292 (461)
T 1z7x_W 213 SDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLA 292 (461)
T ss_dssp TTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECT
T ss_pred HHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECC
Confidence 321 12566777888888999998888742 2223467888999999988885 67778888888999999
Q ss_pred CCCCCc-----cCccccC-CCCCCEEeccCCcCCCC----CcccccCCCCCCEEEccCCcCCC
Q 001152 219 NNKLVE-----LPSGLYL-LQRLENLDLSNNRLTSL----GSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 219 ~N~Ls~-----IP~~l~~-L~~L~~LdLS~N~Lsg~----~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+|.++. +...+.. .++|+.|+|++|.+++. .+..+..+++|+.|+|++|+++.
T Consensus 293 ~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 293 GNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp TCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred CCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 888872 2222222 36888888888888865 34456677888888888888765
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.82 E-value=2.3e-21 Score=219.76 Aligned_cols=241 Identities=18% Similarity=0.176 Sum_probs=139.1
Q ss_pred CcccccCCCCCCcccCCCCCCCC--CCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCc--cCccccCCCCC
Q 001152 18 IKEKLPSEANKINNEKNGSVNDD--DDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNL--IPKSVGRYEKL 93 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l--~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~--IP~~~~~L~~L 93 (1137)
....+.+..|++. +..+..+ ++++.|+|++|.+++.++.. ..+++|++|+|++|.++. +|..+..+++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~----~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L 120 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEH----FSPFRVQHMDLSNSVIEVSTLHGILSQCSKL 120 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSC----CCCBCCCEEECTTCEECHHHHHHHHTTBCCC
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhh----ccCCCCCEEEccCCCcCHHHHHHHHhhCCCC
Confidence 3555666665554 3344444 66777777777776665542 234667777777776652 56666667777
Q ss_pred cEEEccCCCCC-cccccccCCCCCCEEEccCC-CCCC--CcccccCCCCCCEEECCCC-CCCCCcccchhhhcCCC-CCc
Q 001152 94 RNLKFFGNEIN-LFPSEVGNLLGLECLQIKIS-SPGV--NGFALNKLKGLKELELSKV-PPRPSVLTLLSEIAGLK-CLT 167 (1137)
Q Consensus 94 ~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N-~~~~--~~~~~~~L~~L~~L~Ls~n-~ln~~~~~lp~~l~~L~-~L~ 167 (1137)
++|+|++|.++ .+|..++++++|++|+|++| .++. ++..+..+++|++|++++| .+.. ..++..+..++ +|+
T Consensus 121 ~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~--~~~~~~~~~l~~~L~ 198 (336)
T 2ast_B 121 QNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE--KHVQVAVAHVSETIT 198 (336)
T ss_dssp SEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH--HHHHHHHHHSCTTCC
T ss_pred CEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh--HHHHHHHHhcccCCC
Confidence 77777777666 45666666777777777666 3442 3444566666666666664 3221 11344555666 666
Q ss_pred EEeccCCC--Cc--ccCccccCCCCCCEEEccCCC-CC-ccchhhcCCCCCCEEEccCCC-CC-ccCccccCCCCCCEEe
Q 001152 168 KLSVCHFS--IR--YLPPEIGCLSNLEQLDLSFNK-MK-YLPTEICYLKALISLKVANNK-LV-ELPSGLYLLQRLENLD 239 (1137)
Q Consensus 168 ~L~Ls~N~--L~--~IP~~l~~L~~L~~L~Ls~N~-L~-~LP~~l~~L~~L~~L~Ls~N~-Ls-~IP~~l~~L~~L~~Ld 239 (1137)
.|++++|. ++ .+|..+..+++|+.|+|++|. ++ ..+..++.+++|+.|+|++|. ++ .....+.++++|+.|+
T Consensus 199 ~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ 278 (336)
T 2ast_B 199 QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQ 278 (336)
T ss_dssp EEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred EEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEe
Confidence 66666663 32 455555566666666666666 44 445566666666666666664 22 1112355566666666
Q ss_pred ccCCcCCCCCcccccCC-CCCCEEEccCCcCCC
Q 001152 240 LSNNRLTSLGSLDLCLM-HNLQNLNLQYNKLLS 271 (1137)
Q Consensus 240 LS~N~Lsg~~p~~l~~L-~~L~~L~Ls~N~L~~ 271 (1137)
|++| ++ ...+..+ .+|..|++++|+|++
T Consensus 279 l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~ 307 (336)
T 2ast_B 279 VFGI-VP---DGTLQLLKEALPHLQINCSHFTT 307 (336)
T ss_dssp CTTS-SC---TTCHHHHHHHSTTSEESCCCSCC
T ss_pred ccCc-cC---HHHHHHHHhhCcceEEecccCcc
Confidence 6666 22 2222222 224555566666665
No 342
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.82 E-value=2.6e-22 Score=237.35 Aligned_cols=290 Identities=14% Similarity=0.104 Sum_probs=178.3
Q ss_pred CcccccCCCCCCcccC----CCCCCCCCCCCEEEccCCCCCCCCcccc-cCCCCCC-CccEEEeecCCCC-----ccCcc
Q 001152 18 IKEKLPSEANKINNEK----NGSVNDDDDDSVIDVSGKTVDFPLIESY-GNRGGDN-SVEGLYLYKNVLN-----LIPKS 86 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~----~~~f~~l~~L~~LdLs~N~L~~~~p~~~-~~l~~L~-~L~~L~Ls~N~L~-----~IP~~ 86 (1137)
.++.|.+..|+|+... +..|..+++|++|||++|.|+...+..+ ..+.... +|++|+|++|.++ .+|..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 5677777777776442 3456666777777777777765433322 2231111 5777777777776 35666
Q ss_pred ccCCCCCcEEEccCCCCCcc-cccc-----cCCCCCCEEEccCCCCCCC-----cccccCCCCCCEEECCCCCCCCCcc-
Q 001152 87 VGRYEKLRNLKFFGNEINLF-PSEV-----GNLLGLECLQIKISSPGVN-----GFALNKLKGLKELELSKVPPRPSVL- 154 (1137)
Q Consensus 87 ~~~L~~L~~L~Ls~N~L~~l-P~~l-----~~L~~L~~L~Ls~N~~~~~-----~~~~~~L~~L~~L~Ls~n~ln~~~~- 154 (1137)
|..+++|++|+|++|.|+.. +..+ ..+++|+.|+|++|.++.. +..+..+++|++|++++|.+.....
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 188 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVR 188 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHH
Confidence 77777777777777777622 2222 2355677777777765542 3445566777888877754322111
Q ss_pred cchhhhc-CCCCCcEEeccCCCCcc-----cCccccCCCCCCEEEccCCCCCcc-----chhh-cCCCCCCEEEccCCCC
Q 001152 155 TLLSEIA-GLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKYL-----PTEI-CYLKALISLKVANNKL 222 (1137)
Q Consensus 155 ~lp~~l~-~L~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L~~L-----P~~l-~~L~~L~~L~Ls~N~L 222 (1137)
.+...+. .+++|+.|++++|.++. +|..+..+++|+.|+|++|.|+.. ...+ ..+++|+.|+|++|.+
T Consensus 189 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l 268 (461)
T 1z7x_W 189 VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268 (461)
T ss_dssp HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCC
Confidence 1111111 35577788888887774 466667778888888888877632 2233 3577888888888888
Q ss_pred Cc-----cCccccCCCCCCEEeccCCcCCCCCcccccC-----CCCCCEEEccCCcCCCCC---------CCCcchhhcc
Q 001152 223 VE-----LPSGLYLLQRLENLDLSNNRLTSLGSLDLCL-----MHNLQNLNLQYNKLLSYC---------QVPSWICCNL 283 (1137)
Q Consensus 223 s~-----IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~-----L~~L~~L~Ls~N~L~~~~---------~iP~~~~~~l 283 (1137)
+. +|..+..+++|+.|+|++|.++...+..+.. .++|+.|+|++|.+++.+ ..+....+++
T Consensus 269 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 348 (461)
T 1z7x_W 269 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQI 348 (461)
T ss_dssp CHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEEC
T ss_pred CHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEc
Confidence 75 6777777788888888888877544433332 257888888888876521 1233444556
Q ss_pred CCCCCCCC------------CCCcccccccccccCC
Q 001152 284 EGNGKDSS------------NDDFISSSAEMDVYEG 307 (1137)
Q Consensus 284 ~~n~l~~~------------~~~l~~~~~s~n~l~g 307 (1137)
++|.+... ...+...++++|.+.+
T Consensus 349 s~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 349 SNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp CSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred cCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 66654321 2355566666666553
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=2.5e-20 Score=208.85 Aligned_cols=170 Identities=21% Similarity=0.235 Sum_probs=84.0
Q ss_pred CCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001152 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n 147 (1137)
++|+.|++++|.++.+|. +..+++|++|+|++|+|+.++. +.++++|+.|+|++|.+..++. +..+++|++|++++|
T Consensus 46 ~~L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~n 122 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSS-LKDLKKLKSLSLEHN 122 (291)
T ss_dssp HTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGG-GTTCTTCCEEECTTS
T ss_pred CcccEEEccCCCcccChh-HhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCChh-hccCCCCCEEECCCC
Confidence 445555555555554432 4445555555555555554444 4555555555555444333221 333333333333333
Q ss_pred CCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001152 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1137)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1137)
.+... ..+..+++|+.|++++|+++.+ ..+..+++|+.|+|++|+|+.++. +..+++|+.|+|++|.|+.+|.
T Consensus 123 ~i~~~-----~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~l~~ 195 (291)
T 1h6t_A 123 GISDI-----NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLRA 195 (291)
T ss_dssp CCCCC-----GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCGG
T ss_pred cCCCC-----hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCCChh
Confidence 22221 1344455555555555555554 344555555555555555555543 5555555555555555555543
Q ss_pred cccCCCCCCEEeccCCcCCCC
Q 001152 228 GLYLLQRLENLDLSNNRLTSL 248 (1137)
Q Consensus 228 ~l~~L~~L~~LdLS~N~Lsg~ 248 (1137)
+..+++|+.|+|++|+++..
T Consensus 196 -l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 196 -LAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp -GTTCTTCSEEEEEEEEEECC
T ss_pred -hccCCCCCEEECcCCcccCC
Confidence 55555555555555555543
No 344
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.82 E-value=2.1e-19 Score=196.39 Aligned_cols=175 Identities=22% Similarity=0.275 Sum_probs=134.2
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCcEEEccCCCCCcccc-cccCCCCCCEE
Q 001152 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECL 119 (1137)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L 119 (1137)
+.+++|+++|.++..++. +. ++|+.|+|++|.|+.++. .|.++++|++|+|++|.|+.++. .|.++++|++|
T Consensus 15 ~~~~l~~~~~~l~~~p~~-~~-----~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 88 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSG-IP-----ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTL 88 (251)
T ss_dssp GGTEEECTTCCCSSCCSC-CC-----TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCeEEecCCCCccccCCC-CC-----CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEE
Confidence 457788888888865543 21 578888888888887754 68888888888888888886644 47778888888
Q ss_pred EccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCcc-ccCCCCCCEEEccCCC
Q 001152 120 QIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNK 198 (1137)
Q Consensus 120 ~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~ 198 (1137)
+|++|.+..++ +..|..+++|++|+|++|+|+.+|.. |..+++|++|+|++|+
T Consensus 89 ~L~~n~l~~~~--------------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 142 (251)
T 3m19_A 89 GLANNQLASLP--------------------------LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQ 142 (251)
T ss_dssp ECTTSCCCCCC--------------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccC--------------------------hhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCc
Confidence 88777654433 12345567778888888888877764 5788888999999998
Q ss_pred CCccch-hhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeccCCcCCCC
Q 001152 199 MKYLPT-EICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSL 248 (1137)
Q Consensus 199 L~~LP~-~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdLS~N~Lsg~ 248 (1137)
|+.+|. .|..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++|.|++.
T Consensus 143 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 143 LQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 888775 57888889999999999887765 577788999999999998876
No 345
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.82 E-value=7.7e-21 Score=219.17 Aligned_cols=224 Identities=16% Similarity=0.128 Sum_probs=178.7
Q ss_pred EEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-----ccccCCC-CCcEEEccCCCCCcc-cccccCC----
Q 001152 45 VIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-----KSVGRYE-KLRNLKFFGNEINLF-PSEVGNL---- 113 (1137)
Q Consensus 45 ~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP-----~~~~~L~-~L~~L~Ls~N~L~~l-P~~l~~L---- 113 (1137)
+++|++|++++.+|..+... ++|++|+|++|.|+.++ ..|..++ +|++|+|++|.|+.. +..+..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~---~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~ 78 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIP---HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAI 78 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSC---TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTS
T ss_pred ccccccccchHHHHHHHhCC---CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhcc
Confidence 57899999999999877554 67999999999999876 5678898 899999999999855 5556654
Q ss_pred -CCCCEEEccCCCCCCCccc-----ccCC-CCCCEEECCCCCCCCCccc-chhhhcC-CCCCcEEeccCCCCc-----cc
Q 001152 114 -LGLECLQIKISSPGVNGFA-----LNKL-KGLKELELSKVPPRPSVLT-LLSEIAG-LKCLTKLSVCHFSIR-----YL 179 (1137)
Q Consensus 114 -~~L~~L~Ls~N~~~~~~~~-----~~~L-~~L~~L~Ls~n~ln~~~~~-lp~~l~~-L~~L~~L~Ls~N~L~-----~I 179 (1137)
++|++|+|++|.++..+.. +..+ ++|++|+|++|.+...... +...+.. .++|++|+|++|.|+ .+
T Consensus 79 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 158 (362)
T 3goz_A 79 PANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL 158 (362)
T ss_dssp CTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred CCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH
Confidence 9999999999997755532 5555 8999999999765433321 1223444 369999999999998 34
Q ss_pred CccccCCC-CCCEEEccCCCCCccc-h----hhcCC-CCCCEEEccCCCCCc-----cCccccC-CCCCCEEeccCCcCC
Q 001152 180 PPEIGCLS-NLEQLDLSFNKMKYLP-T----EICYL-KALISLKVANNKLVE-----LPSGLYL-LQRLENLDLSNNRLT 246 (1137)
Q Consensus 180 P~~l~~L~-~L~~L~Ls~N~L~~LP-~----~l~~L-~~L~~L~Ls~N~Ls~-----IP~~l~~-L~~L~~LdLS~N~Ls 246 (1137)
+..+..++ +|++|+|++|+|+..+ . .+..+ ++|+.|+|++|.|+. +|..+.. .++|+.|+|++|+|+
T Consensus 159 ~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 238 (362)
T 3goz_A 159 IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLH 238 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCC
T ss_pred HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 55566666 9999999999998543 3 44555 599999999999997 7777776 459999999999999
Q ss_pred CCCcc----cccCCCCCCEEEccCCcCCC
Q 001152 247 SLGSL----DLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 247 g~~p~----~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+.++. .+..+++|+.|+|++|.+..
T Consensus 239 ~~~~~~l~~~~~~l~~L~~L~L~~n~l~~ 267 (362)
T 3goz_A 239 GPSLENLKLLKDSLKHLQTVYLDYDIVKN 267 (362)
T ss_dssp CCCHHHHHHTTTTTTTCSEEEEEHHHHTT
T ss_pred cHHHHHHHHHHhcCCCccEEEeccCCccc
Confidence 87763 34678999999999999654
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.81 E-value=1.3e-19 Score=208.10 Aligned_cols=219 Identities=19% Similarity=0.103 Sum_probs=179.1
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcc-cccCCCCCCCccE-EEeecCCCCccC-ccccCCCC
Q 001152 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIE-SYGNRGGDNSVEG-LYLYKNVLNLIP-KSVGRYEK 92 (1137)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~-~~~~l~~L~~L~~-L~Ls~N~L~~IP-~~~~~L~~ 92 (1137)
+++++.|.+..|+|+.|++++|.++++|++|||++|++.+.+|. .|. ++++|.. +.++.|+|+.|| ..|..+++
T Consensus 29 ~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~---~L~~l~~~l~~~~N~l~~l~~~~f~~l~~ 105 (350)
T 4ay9_X 29 PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFS---NLPKLHEIRIEKANNLLYINPEAFQNLPN 105 (350)
T ss_dssp CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBC---SCTTCCEEEEEEETTCCEECTTSBCCCTT
T ss_pred CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhh---cchhhhhhhcccCCcccccCchhhhhccc
Confidence 35799999999999999999999999999999999999776654 454 4477665 677889999985 57899999
Q ss_pred CcEEEccCCCCCccccc-ccCCCCCCEEEccC-CCCCCCc-ccccCCC-CCCEEECCCCCCCCCcccchhhhcCCCCCcE
Q 001152 93 LRNLKFFGNEINLFPSE-VGNLLGLECLQIKI-SSPGVNG-FALNKLK-GLKELELSKVPPRPSVLTLLSEIAGLKCLTK 168 (1137)
Q Consensus 93 L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~-N~~~~~~-~~~~~L~-~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~ 168 (1137)
|++|++++|+|+.+|.. +....++..|++.. |.+..++ ..|..+. .|+.|+|++|.+ ..+|..+....+|+.
T Consensus 106 L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i----~~i~~~~f~~~~L~~ 181 (350)
T 4ay9_X 106 LQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI----QEIHNSAFNGTQLDE 181 (350)
T ss_dssp CCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC----CEECTTSSTTEEEEE
T ss_pred cccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc----cCCChhhccccchhH
Confidence 99999999999988654 56777888898865 4566655 4566664 688999999655 356666667788999
Q ss_pred Eecc-CCCCcccCc-cccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCC-CCCccCccccCCCCCCEEeccCCc
Q 001152 169 LSVC-HFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANN-KLVELPSGLYLLQRLENLDLSNNR 244 (1137)
Q Consensus 169 L~Ls-~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N-~Ls~IP~~l~~L~~L~~LdLS~N~ 244 (1137)
|++. +|.++.||. .|..+++|++|+|++|+|+.||... +.+|+.|.+.++ .++.+|. +.++++|+.++++++.
T Consensus 182 l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~--~~~L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 182 LNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG--LENLKKLRARSTYNLKKLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp EECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS--CTTCCEEECTTCTTCCCCCC-TTTCCSCCEEECSCHH
T ss_pred HhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh--hccchHhhhccCCCcCcCCC-chhCcChhhCcCCCCc
Confidence 9997 588999997 5799999999999999999999643 567777776554 5889994 8889999999998764
No 347
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=9.6e-20 Score=210.17 Aligned_cols=180 Identities=23% Similarity=0.218 Sum_probs=135.0
Q ss_pred cEEEeecCCCCccCccccCCCCCcEEEccCCCCCccccc-cc-CCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001152 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSE-VG-NLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1137)
Q Consensus 71 ~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~-l~-~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ 148 (1137)
+.+++++|.|+.||..+.. .|+.|+|++|+|+.+|.. +. ++++|+.|+|++|.+..++
T Consensus 21 ~~l~c~~~~l~~iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~------------------ 80 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFIS------------------ 80 (361)
T ss_dssp TEEECCSSCCSSCCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEEC------------------
T ss_pred CEEEeCCCCcCccCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccC------------------
Confidence 4667777777777765543 466777777777766543 33 5566666665555433222
Q ss_pred CCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccC
Q 001152 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELP 226 (1137)
Q Consensus 149 ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP 226 (1137)
+..|.++++|++|+|++|+|+.+|. .|..+++|++|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|
T Consensus 81 --------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 81 --------SEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp --------TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred --------hhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 2345567778888888888887765 578889999999999999866 567888999999999999999998
Q ss_pred ccc----cCCCCCCEEeccCCcCCCCCcccccCCCC--CCEEEccCCcCCCCCCCCcc
Q 001152 227 SGL----YLLQRLENLDLSNNRLTSLGSLDLCLMHN--LQNLNLQYNKLLSYCQVPSW 278 (1137)
Q Consensus 227 ~~l----~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~--L~~L~Ls~N~L~~~~~iP~~ 278 (1137)
..+ ..+++|+.|+|++|+|+++++..+..++. |+.|+|++|+|.|.|.+-.+
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~~~ 210 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQL 210 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHHHHH
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCcHHH
Confidence 775 46899999999999999998888888887 48999999999998876544
No 348
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=3.8e-19 Score=199.27 Aligned_cols=191 Identities=24% Similarity=0.226 Sum_probs=167.8
Q ss_pred CCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001152 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n 147 (1137)
..+..+.+..+.++.+. .+..+++|+.|++++|.++.+|. +..+++|+.|+|++|.+..++. +..+++|+.|++++|
T Consensus 24 ~~~~~~~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHHHHTTCSCTTSEE-CHHHHHTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred HHHHHHHhcCCCccccc-chhhcCcccEEEccCCCcccChh-HhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCC
Confidence 34555667777776552 34678899999999999999975 8999999999999999888777 999999999999997
Q ss_pred CCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001152 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1137)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1137)
.+.. ++ .+..+++|+.|++++|+++.++ .+..+++|+.|+|++|+|+.+ ..+..+++|+.|+|++|+|+.++.
T Consensus 101 ~l~~----~~-~l~~l~~L~~L~L~~n~i~~~~-~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 101 KVKD----LS-SLKDLKKLKSLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CCCC----GG-GGTTCTTCCEEECTTSCCCCCG-GGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred cCCC----Ch-hhccCCCCCEEECCCCcCCCCh-hhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh
Confidence 7644 33 4889999999999999999884 688999999999999999998 589999999999999999998876
Q ss_pred cccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 228 GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 228 ~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+..+++|+.|+|++|+|++++ .+..+++|+.|+|++|+++.
T Consensus 174 -l~~l~~L~~L~L~~N~i~~l~--~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEEEEEEC
T ss_pred -hcCCCccCEEECCCCcCCCCh--hhccCCCCCEEECcCCcccC
Confidence 899999999999999999974 48999999999999999876
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.80 E-value=8e-20 Score=204.20 Aligned_cols=152 Identities=16% Similarity=0.143 Sum_probs=112.8
Q ss_pred CceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCC----hH------HHHHhHHhHHHHHHHHHhCCCCCcceee
Q 001152 803 SLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSS----AD------EIRNFEYSCLGEVRMLGALRHSCIVEMY 871 (1137)
Q Consensus 803 ~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~----~~------~~e~~~~~~lrEi~iL~~L~HpNIVkll 871 (1137)
.|.+.+.||+|+||.||+|.+. +..+|+|+......... .. .......++.+|+.+|++++ | ++++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 3667899999999999999993 57899998643321110 00 00012234589999999999 4 6666
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 001152 872 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 951 (1137)
Q Consensus 872 g~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gIIHrDLK 951 (1137)
+++... ..++||||++|++|.+ +.. .....++.||+.||+|||++||+|||||
T Consensus 168 ~~~~~~---------------~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~giiHrDlk 220 (282)
T 1zar_A 168 KVYAWE---------------GNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRGIVHGDLS 220 (282)
T ss_dssp CEEEEE---------------TTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred eEEecc---------------ceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCCCEeCCCC
Confidence 655432 3499999999999987 421 2245799999999999999999999999
Q ss_pred CCCeEeccccccCCCCCeEEEeecCccccccccccccccccCCCCCCCcccCCCcccchhhhcc
Q 001152 952 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA 1015 (1137)
Q Consensus 952 P~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 1015 (1137)
|+|||++ + +.+||+|||+++. +..|+|||++..
T Consensus 221 p~NILl~-~-------~~vkl~DFG~a~~-----------------------~~~~~a~e~l~r 253 (282)
T 1zar_A 221 QYNVLVS-E-------EGIWIIDFPQSVE-----------------------VGEEGWREILER 253 (282)
T ss_dssp TTSEEEE-T-------TEEEECCCTTCEE-----------------------TTSTTHHHHHHH
T ss_pred HHHEEEE-C-------CcEEEEECCCCeE-----------------------CCCCCHHHHHHH
Confidence 9999999 6 7899999998752 236789998764
No 350
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.7e-19 Score=221.95 Aligned_cols=171 Identities=20% Similarity=0.236 Sum_probs=90.3
Q ss_pred CCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001152 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n 147 (1137)
++|+.|+|++|.|+.+| .|..|++|+.|+|++|.|+.+|. +.+|++|+.|+|++|.+..++ .+..|++|+.|+|++|
T Consensus 43 ~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N 119 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKDLS-SLKDLKKLKSLSLEHN 119 (605)
T ss_dssp TTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCT-TSTTCTTCCEEECTTS
T ss_pred CCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCCCh-hhccCCCCCEEEecCC
Confidence 45555555555555554 35555555555555555555544 555555555555555444332 2334444444444443
Q ss_pred CCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001152 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1137)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1137)
.+... ..+..|++|+.|+|++|.|+.+ ..+..|++|+.|+|++|+|+.++. +..+++|+.|+|++|+|+.+|
T Consensus 120 ~l~~l-----~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l~- 191 (605)
T 1m9s_A 120 GISDI-----NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLR- 191 (605)
T ss_dssp CCCCC-----GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCG-
T ss_pred CCCCC-----ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCCCh-
Confidence 33221 1344555555666666655555 345555666666666666655543 555666666666666665553
Q ss_pred cccCCCCCCEEeccCCcCCCCC
Q 001152 228 GLYLLQRLENLDLSNNRLTSLG 249 (1137)
Q Consensus 228 ~l~~L~~L~~LdLS~N~Lsg~~ 249 (1137)
.+..|++|+.|+|++|.|++.+
T Consensus 192 ~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 192 ALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp GGTTCTTCSEEECCSEEEECCC
T ss_pred HHccCCCCCEEEccCCcCcCCc
Confidence 3555566666666666665544
No 351
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.79 E-value=3.9e-20 Score=209.73 Aligned_cols=231 Identities=16% Similarity=0.134 Sum_probs=189.3
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCC-CcccccCCCCCCCccEEEeecCCCC-ccCccccCCCCCc
Q 001152 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFP-LIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLR 94 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~-~p~~~~~l~~L~~L~~L~Ls~N~L~-~IP~~~~~L~~L~ 94 (1137)
+.+..+.+..|.|..+.+. +..+++|++|+|++|.+++. ++..+..+ ++|++|+|++|.++ .+|..|..+++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~---~~L~~L~L~~~~l~~~~~~~l~~~~~L~ 145 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQC---SKLQNLSLEGLRLSDPIVNTLAKNSNLV 145 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTB---CCCSEEECTTCBCCHHHHHHHTTCTTCS
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhC---CCCCEEeCcCcccCHHHHHHHhcCCCCC
Confidence 3688899999999998776 55799999999999999876 66666554 99999999999998 6788899999999
Q ss_pred EEEccCC-CCC--cccccccCCCCCCEEEccCC-CCCC--CcccccCCC-CCCEEECCCCCCCCCcccchhhhcCCCCCc
Q 001152 95 NLKFFGN-EIN--LFPSEVGNLLGLECLQIKIS-SPGV--NGFALNKLK-GLKELELSKVPPRPSVLTLLSEIAGLKCLT 167 (1137)
Q Consensus 95 ~L~Ls~N-~L~--~lP~~l~~L~~L~~L~Ls~N-~~~~--~~~~~~~L~-~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~ 167 (1137)
+|+|++| .++ .+|..+.++++|+.|+|++| .++. ++..+..++ +|++|++++|.+.-....+|..+..+++|+
T Consensus 146 ~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~ 225 (336)
T 2ast_B 146 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLV 225 (336)
T ss_dssp EEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCS
T ss_pred EEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCC
Confidence 9999999 788 47888999999999999999 7764 456788999 999999999642122256777788999999
Q ss_pred EEeccCCC-Cc-ccCccccCCCCCCEEEccCCC-CC-ccchhhcCCCCCCEEEccCCCCCccCcc-ccCC-CCCCEEecc
Q 001152 168 KLSVCHFS-IR-YLPPEIGCLSNLEQLDLSFNK-MK-YLPTEICYLKALISLKVANNKLVELPSG-LYLL-QRLENLDLS 241 (1137)
Q Consensus 168 ~L~Ls~N~-L~-~IP~~l~~L~~L~~L~Ls~N~-L~-~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L-~~L~~LdLS 241 (1137)
.|++++|. ++ ..+..+..+++|+.|+|++|. +. .....++++++|+.|+|++| +|.. +..+ .+|..|+++
T Consensus 226 ~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~----i~~~~~~~l~~~l~~L~l~ 301 (336)
T 2ast_B 226 HLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI----VPDGTLQLLKEALPHLQIN 301 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS----SCTTCHHHHHHHSTTSEES
T ss_pred EEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc----cCHHHHHHHHhhCcceEEe
Confidence 99999999 66 667788999999999999995 33 11236888999999999999 4432 3333 346777799
Q ss_pred CCcCCCCCcccccC
Q 001152 242 NNRLTSLGSLDLCL 255 (1137)
Q Consensus 242 ~N~Lsg~~p~~l~~ 255 (1137)
+|+|++..|..++.
T Consensus 302 ~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 302 CSHFTTIARPTIGN 315 (336)
T ss_dssp CCCSCCTTCSSCSS
T ss_pred cccCccccCCcccc
Confidence 99999999876654
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=4e-19 Score=218.69 Aligned_cols=190 Identities=20% Similarity=0.172 Sum_probs=164.4
Q ss_pred ccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEEccCC
Q 001152 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGN 101 (1137)
Q Consensus 22 L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N 101 (1137)
+.+..+.+..+. .+..+++|+.|+|++|.|.... .+ ..|++|+.|+|++|.|+.+|+ |..|++|+.|+|++|
T Consensus 26 l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~l~--~l---~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 26 DNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSVQ--GI---QYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCCCT--TG---GGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSS
T ss_pred HhccCCCccccc--chhcCCCCCEEECcCCCCCCCh--HH---ccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCC
Confidence 344555665553 4678899999999999998753 24 445999999999999999877 999999999999999
Q ss_pred CCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCc
Q 001152 102 EINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP 181 (1137)
Q Consensus 102 ~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~ 181 (1137)
.|+.+| .+..|++|+.|+|++|.+..++ .+..|++|+.|+|++|.+... ..+..|++|+.|+|++|.|+.+++
T Consensus 98 ~l~~l~-~l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l-----~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 98 KIKDLS-SLKDLKKLKSLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI-----TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CCCCCT-TSTTCTTCCEEECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC-----GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCCh-hhccCCCCCEEEecCCCCCCCc-cccCCCccCEEECCCCccCCc-----hhhcccCCCCEEECcCCcCCCchh
Confidence 999887 6999999999999999988764 588999999999999877653 468899999999999999998876
Q ss_pred cccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCcc
Q 001152 182 EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSG 228 (1137)
Q Consensus 182 ~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~ 228 (1137)
+..+++|+.|+|++|+|+.+| .+..|++|+.|+|++|.|+..|..
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEECCSEEEECCCCC
T ss_pred -hccCCCCCEEECcCCCCCCCh-HHccCCCCCEEEccCCcCcCCccc
Confidence 899999999999999999986 699999999999999999876643
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=187.03 Aligned_cols=121 Identities=19% Similarity=0.231 Sum_probs=102.4
Q ss_pred hcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCCcc-CccccCCCCCC
Q 001152 160 IAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVEL-PSGLYLLQRLE 236 (1137)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~-~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~ 236 (1137)
|..+++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+|. .|..+++|++|+|++|+|+.+ |..+..+++|+
T Consensus 53 ~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 132 (220)
T ss_dssp GGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS
T ss_pred hccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC
Confidence 3456667777777777776665 78888999999999999997765 478899999999999999977 67788899999
Q ss_pred EEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchh
Q 001152 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWIC 280 (1137)
Q Consensus 237 ~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1137)
.|+|++|+|++++|..|..+++|+.|+|++|+|.|.|.+.....
T Consensus 133 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~ 176 (220)
T 2v70_A 133 LLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGE 176 (220)
T ss_dssp EEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHHHH
T ss_pred EEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHHHH
Confidence 99999999999999899999999999999999999887654433
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.3e-18 Score=185.01 Aligned_cols=122 Identities=24% Similarity=0.284 Sum_probs=100.7
Q ss_pred hcCCCCCcEEeccCCCCccc-CccccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCcc-CccccCCCCCC
Q 001152 160 IAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVEL-PSGLYLLQRLE 236 (1137)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~ 236 (1137)
|..+++|+.|+|++|+|+.+ |..|..+++|++|+|++|+|+.+|.. |..+++|+.|+|++|+|+.+ |..|..+++|+
T Consensus 52 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 131 (220)
T 2v9t_B 52 FSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 131 (220)
T ss_dssp STTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCC
Confidence 34455666777777777755 56788888888889998988888765 57789999999999999977 55688899999
Q ss_pred EEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhh
Q 001152 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICC 281 (1137)
Q Consensus 237 ~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1137)
.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|.+.....+
T Consensus 132 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~l~~~ 176 (220)
T 2v9t_B 132 LLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADY 176 (220)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHH
T ss_pred EEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccHHHHHH
Confidence 999999999999988899999999999999999999887555444
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=4.1e-18 Score=184.03 Aligned_cols=116 Identities=29% Similarity=0.342 Sum_probs=98.1
Q ss_pred hhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccCccccCCCCCC
Q 001152 159 EIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLE 236 (1137)
Q Consensus 159 ~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~ 236 (1137)
.|.++++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+|.. |..+++|+.|+|++|+|+.||..+..+++|+
T Consensus 59 ~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~ 138 (229)
T 3e6j_A 59 VFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLT 138 (229)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCS
T ss_pred HhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCC
Confidence 34456667777777777777765 457888899999999999888754 5789999999999999999999999999999
Q ss_pred EEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001152 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1137)
Q Consensus 237 ~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1137)
.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|.
T Consensus 139 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 139 HLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred EEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999999999988789999999999999999998664
No 356
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=2.6e-21 Score=236.60 Aligned_cols=196 Identities=23% Similarity=0.212 Sum_probs=147.8
Q ss_pred CCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEEccCCC-------------CC-cccccccCCCCCCEEE-
Q 001152 56 PLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNE-------------IN-LFPSEVGNLLGLECLQ- 120 (1137)
Q Consensus 56 ~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~-------------L~-~lP~~l~~L~~L~~L~- 120 (1137)
....++.++..++.|+.|+|++|+|+.||.+|++|++|+.|++++|. +. .+|..+++|++|+.|+
T Consensus 337 ~~~~~~~d~~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~ 416 (567)
T 1dce_A 337 RPECWCRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDP 416 (567)
T ss_dssp CSEEEEECCSTTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCG
T ss_pred CchhhhcccccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcc
Confidence 33344444556688888899998888888888888888888887764 22 3344455555555555
Q ss_pred ccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCC
Q 001152 121 IKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMK 200 (1137)
Q Consensus 121 Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~ 200 (1137)
++.|. +.+|..+.+++| .+..+|. ..|+.|+|++|.|+.||. |+.+++|+.|+|++|+|+
T Consensus 417 l~~n~----------~~~L~~l~l~~n----~i~~l~~-----~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~ 476 (567)
T 1dce_A 417 MRAAY----------LDDLRSKFLLEN----SVLKMEY-----ADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR 476 (567)
T ss_dssp GGHHH----------HHHHHHHHHHHH----HHHHHHH-----TTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC
T ss_pred hhhcc----------cchhhhhhhhcc----cccccCc-----cCceEEEecCCCCCCCcC-ccccccCcEeecCccccc
Confidence 33222 122223333331 1222222 248889999999999987 899999999999999999
Q ss_pred ccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCCC-cccccCCCCCCEEEccCCcCCCC
Q 001152 201 YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLG-SLDLCLMHNLQNLNLQYNKLLSY 272 (1137)
Q Consensus 201 ~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~-p~~l~~L~~L~~L~Ls~N~L~~~ 272 (1137)
.||..|+.+++|+.|+|++|+|+.|| .++.+++|+.|+|++|+|++++ |..|..|++|+.|+|++|+|++.
T Consensus 477 ~lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 477 ALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred ccchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 99999999999999999999999998 8889999999999999999986 77899999999999999998874
No 357
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.76 E-value=3.2e-18 Score=181.29 Aligned_cols=92 Identities=18% Similarity=0.172 Sum_probs=48.2
Q ss_pred hcCCCCCcEEeccCCCCcccCcc-ccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccCccccCCCCCCE
Q 001152 160 IAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLEN 237 (1137)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~ 237 (1137)
+..+++|++|++++|+|+.+|.. |..+++|++|+|++|+|+.+|.. +..+++|+.|+|++|.+. +.+++|+.
T Consensus 96 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~------~~~~~l~~ 169 (208)
T 2o6s_A 96 FDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD------CTCPGIRY 169 (208)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC------CCTTTTHH
T ss_pred hcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee------cCCCCHHH
Confidence 34455555555555555554442 45555555555555555555433 455555555555555433 22345555
Q ss_pred EeccCCcCCCCCcccccCCC
Q 001152 238 LDLSNNRLTSLGSLDLCLMH 257 (1137)
Q Consensus 238 LdLS~N~Lsg~~p~~l~~L~ 257 (1137)
|+++.|+++|.+|.+++.++
T Consensus 170 L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 170 LSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp HHHHHHHCTTTBBCTTSSBC
T ss_pred HHHHHHhCCceeeccCcccc
Confidence 55555555555555544443
No 358
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=6.6e-19 Score=194.52 Aligned_cols=167 Identities=22% Similarity=0.192 Sum_probs=77.9
Q ss_pred CccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001152 69 SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1137)
Q Consensus 69 ~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ 148 (1137)
+++.|+|++|.++.++ .+..+++|++|+|++|.|+.+| .+..+++|+.|+|++|.+..++.
T Consensus 20 ~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~----------------- 80 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP----------------- 80 (263)
T ss_dssp HHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-----------------
T ss_pred HHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh-----------------
Confidence 3444445555555444 3444455555555555555444 34444444444444444332222
Q ss_pred CCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCcc
Q 001152 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSG 228 (1137)
Q Consensus 149 ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~ 228 (1137)
+..+++|+.|++++|+|+.+|.... ++|++|+|++|+|+.+| .+..+++|+.|+|++|+|+.+| .
T Consensus 81 -----------l~~l~~L~~L~L~~N~l~~l~~~~~--~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~~-~ 145 (263)
T 1xeu_A 81 -----------LKDLTKLEELSVNRNRLKNLNGIPS--ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSIV-M 145 (263)
T ss_dssp -----------GTTCSSCCEEECCSSCCSCCTTCCC--SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBCG-G
T ss_pred -----------hccCCCCCEEECCCCccCCcCcccc--CcccEEEccCCccCCCh-hhcCcccccEEECCCCcCCCCh-H
Confidence 3333444444444444444433211 44555555555555443 3444555555555555555443 3
Q ss_pred ccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 229 LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 229 l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++
T Consensus 146 l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 146 LGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp GGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred HccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 44455555555555555544 234455555555555555443
No 359
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=1.3e-18 Score=192.09 Aligned_cols=149 Identities=24% Similarity=0.272 Sum_probs=124.8
Q ss_pred CCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcE
Q 001152 89 RYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTK 168 (1137)
Q Consensus 89 ~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~ 168 (1137)
++.+|..|+|++|.++.++ .+..+++|+.|++++|.+.. ++ .+..+++|+.
T Consensus 17 ~l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~---------------------------l~-~l~~l~~L~~ 67 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQS---------------------------LA-GMQFFTNLKE 67 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCC---------------------------CT-TGGGCTTCCE
T ss_pred HHHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCccc---------------------------ch-HHhhCCCCCE
Confidence 4556777788888888776 56667777777776655332 22 4567888999
Q ss_pred EeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeccCCcCCCC
Q 001152 169 LSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSL 248 (1137)
Q Consensus 169 L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~ 248 (1137)
|++++|+|+.+|. +..+++|++|+|++|+|+.+|.... ++|+.|+|++|+|+.+| .+..+++|+.|+|++|+|+++
T Consensus 68 L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~l~~~~~--~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 68 LHLSHNQISDLSP-LKDLTKLEELSVNRNRLKNLNGIPS--ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp EECCSSCCCCCGG-GTTCSSCCEEECCSSCCSCCTTCCC--SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBC
T ss_pred EECCCCccCCChh-hccCCCCCEEECCCCccCCcCcccc--CcccEEEccCCccCCCh-hhcCcccccEEECCCCcCCCC
Confidence 9999999998888 9999999999999999999885433 89999999999999986 589999999999999999998
Q ss_pred CcccccCCCCCCEEEccCCcCCCC
Q 001152 249 GSLDLCLMHNLQNLNLQYNKLLSY 272 (1137)
Q Consensus 249 ~p~~l~~L~~L~~L~Ls~N~L~~~ 272 (1137)
+ .+..+++|+.|+|++|+|+++
T Consensus 144 ~--~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 144 V--MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp G--GGGGCTTCCEEECTTSCCCBC
T ss_pred h--HHccCCCCCEEECCCCcCcch
Confidence 4 689999999999999999874
No 360
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.74 E-value=9.8e-18 Score=177.56 Aligned_cols=169 Identities=20% Similarity=0.176 Sum_probs=102.4
Q ss_pred CccEEEeecCCCCccCc-cccCCCCCcEEEccCCCCCccccc-ccCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECC
Q 001152 69 SVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELS 145 (1137)
Q Consensus 69 ~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~~~~~~~-~~~~L~~L~~L~Ls 145 (1137)
+|++|+|++|.|+.+|. .|..+++|++|+|++|+|+.+|.. |.++++|++|+|++|.+..++. .+..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44444444444444433 234444444444444444444332 3444444444444444433332 24455555555555
Q ss_pred CCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCcc-ccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCC-
Q 001152 146 KVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLV- 223 (1137)
Q Consensus 146 ~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls- 223 (1137)
+|.+.. ..+..+..+++|+.|++++|.|+.+|.. +..+++|+.|+|++|.+. +.+++|++|+++.|+++
T Consensus 109 ~N~l~~---~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~------~~~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 109 TNQLQS---LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD------CTCPGIRYLSEWINKHSG 179 (208)
T ss_dssp SSCCCC---CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC------CCTTTTHHHHHHHHHCTT
T ss_pred CCcCcc---cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee------cCCCCHHHHHHHHHhCCc
Confidence 543322 1123466788899999999999888774 788999999999999765 34568899999999998
Q ss_pred ccCccccCCCCCCEEeccCCcCCCCCc
Q 001152 224 ELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1137)
Q Consensus 224 ~IP~~l~~L~~L~~LdLS~N~Lsg~~p 250 (1137)
.||.+++.++. ++..+...+.++
T Consensus 180 ~ip~~~~~l~~----~~~~C~~~~~~~ 202 (208)
T 2o6s_A 180 VVRNSAGSVAP----DSAKCSGSGKPV 202 (208)
T ss_dssp TBBCTTSSBCT----TCSBBTTTCCBG
T ss_pred eeeccCccccC----CccccccCCCcc
Confidence 88998887765 444555444444
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=3.8e-17 Score=176.50 Aligned_cols=153 Identities=22% Similarity=0.256 Sum_probs=115.2
Q ss_pred ccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcc-cccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001152 70 VEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1137)
Q Consensus 70 L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ 148 (1137)
.+.++.++|.++.||..+. ++|++|+|++|.|+.+ |..|.++++|+.|+|++|.+..++
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~------------------ 80 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP------------------ 80 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------------------
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC------------------
Confidence 4567777777777776554 5777777777777755 455666666666666666543332
Q ss_pred CCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001152 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1137)
Q Consensus 149 ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1137)
+..|..+++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+|..+..+++|+.|+|++|+|+.+|.
T Consensus 81 --------~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 81 --------VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp --------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred --------hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCH
Confidence 1234567778888888888887776 4678899999999999999999889899999999999999998875
Q ss_pred c-ccCCCCCCEEeccCCcCCCCCc
Q 001152 228 G-LYLLQRLENLDLSNNRLTSLGS 250 (1137)
Q Consensus 228 ~-l~~L~~L~~LdLS~N~Lsg~~p 250 (1137)
. +..+++|+.|+|++|.+++..+
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTTBG
T ss_pred HHHhCCCCCCEEEeeCCCccCCcc
Confidence 4 7778999999999999886643
No 362
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=8.4e-19 Score=220.52 Aligned_cols=194 Identities=19% Similarity=0.065 Sum_probs=88.9
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCC--CccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCC
Q 001152 40 DDDDSVIDVSGKTVDFPLIESYGNRGGDN--SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLE 117 (1137)
Q Consensus 40 l~~L~~LdLs~N~L~~~~p~~~~~l~~L~--~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~ 117 (1137)
.+.+..|+|++|.+.......+..+ .|. +|..+++..|.+...|..|..+++|+.|+|++|.|..||..++++++|+
T Consensus 172 ~~~~~~l~L~~n~~~~~~~~~l~~l-~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~ 250 (727)
T 4b8c_D 172 TPLTPKIELFANGKDEANQALLQHK-KLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLT 250 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCS
T ss_pred CCccceEEeeCCCCCcchhhHhhcC-ccCcccccCccccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCC
Confidence 3557777787777766432211111 111 1222333334444344556666666666666666666666555555555
Q ss_pred EEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCC
Q 001152 118 CLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFN 197 (1137)
Q Consensus 118 ~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N 197 (1137)
+|+|++|.+. .+|..|++|++|++|+|++|.|+.||..|+.|++|++|+|++|
T Consensus 251 ~L~Ls~N~l~---------------------------~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N 303 (727)
T 4b8c_D 251 RLYLNGNSLT---------------------------ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDN 303 (727)
T ss_dssp CCBCTTSCCS---------------------------CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSS
T ss_pred EEEeeCCcCc---------------------------ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCC
Confidence 5555544433 3455566677777777777777777777777777777777777
Q ss_pred CCCccchhhcCCCCCCEEEccCCCCC-ccCccccCCC-CCCEEeccCCcCCCCCcccccCCCCCCEEEccCC
Q 001152 198 KMKYLPTEICYLKALISLKVANNKLV-ELPSGLYLLQ-RLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1137)
Q Consensus 198 ~L~~LP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~-~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N 267 (1137)
.|+.||..|+.|++|+.|+|++|.|+ .+|..+..+. .+..|+|++|.+++.+|. .|..|++++|
T Consensus 304 ~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 304 MVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp CCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------
T ss_pred CCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecc
Confidence 77777777777777777777777777 4455554322 122367777777777663 4556666665
No 363
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.4e-17 Score=175.31 Aligned_cols=152 Identities=16% Similarity=0.207 Sum_probs=102.7
Q ss_pred cCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc
Q 001152 88 GRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT 167 (1137)
Q Consensus 88 ~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~ 167 (1137)
..+++|+.|+|++|.|+.+| .+..+++|+.|++++|.+... ..+..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~----------------------------~~l~~l~~L~ 91 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNY----------------------------NPISGLSNLE 91 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCC----------------------------GGGTTCTTCC
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcc----------------------------hhhhcCCCCC
Confidence 44555666666666666555 455555555555554432211 2345566677
Q ss_pred EEeccCCCCcc-cCccccCCCCCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCC-CCccCccccCCCCCCEEeccCCc
Q 001152 168 KLSVCHFSIRY-LPPEIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNK-LVELPSGLYLLQRLENLDLSNNR 244 (1137)
Q Consensus 168 ~L~Ls~N~L~~-IP~~l~~L~~L~~L~Ls~N~L~-~LP~~l~~L~~L~~L~Ls~N~-Ls~IP~~l~~L~~L~~LdLS~N~ 244 (1137)
+|++++|.++. .|..++.+++|++|+|++|+++ ..|..++.+++|+.|+|++|+ ++.+| .+..+++|+.|+|++|+
T Consensus 92 ~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 92 RLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBC
T ss_pred EEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCC
Confidence 77777777763 5667777888888888888887 466777788888888888887 77776 57778888888888888
Q ss_pred CCCCCcccccCCCCCCEEEccCCcCCC
Q 001152 245 LTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 245 Lsg~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
+++++ .+..+++|+.|++++|++..
T Consensus 171 i~~~~--~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 171 VHDYR--GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCCT--TGGGCSSCCEEEECBC----
T ss_pred CcChH--HhccCCCCCEEEeeCcccCC
Confidence 88764 57778888888888887643
No 364
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=1.2e-17 Score=183.74 Aligned_cols=142 Identities=15% Similarity=0.123 Sum_probs=103.8
Q ss_pred ceEeeeecccCceEEEEEEE--CCcc--EEEEEEecccCCCChH----------------HHHHhHHhHHHHHHHHHhCC
Q 001152 804 LSSCDEAGKSVSSSLFRCKF--GSAD--AAAKVRTLKVCGSSAD----------------EIRNFEYSCLGEVRMLGALR 863 (1137)
Q Consensus 804 y~l~~~LG~GsfG~Vy~a~~--~~~~--vAVKi~~l~~~~~~~~----------------~~e~~~~~~lrEi~iL~~L~ 863 (1137)
|++.+.||+|+||.||+|.+ .+.. +|||+.+......... .......++.+|+.+|..+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999998 6778 9999864432111000 01112235688999999999
Q ss_pred CCCc--ceeeeeEecCCCCCCCCCCCccccceEEEEEeeccC-C----CHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH
Q 001152 864 HSCI--VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKG-G----SVKNYIEKLSETGEKHVSVKLALFIAQDVAAA 936 (1137)
Q Consensus 864 HpNI--Vkllg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~g-g----SL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~g 936 (1137)
|++| ..++++ . ..+|||||+.+ | +|.++... .++..+..++.||+.|
T Consensus 129 ~~~i~~p~~~~~--~----------------~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~ 182 (258)
T 1zth_A 129 EAGVSVPQPYTY--M----------------KNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVEN 182 (258)
T ss_dssp HTTCCCCCEEEE--E----------------TTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc--C----------------CCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHH
Confidence 8865 344432 1 23899999942 3 67665422 2345678899999999
Q ss_pred HHHHH-hCCeeeccCCCCCeEeccccccCCCCCeEEEeecCcccc
Q 001152 937 LVELH-SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 980 (1137)
Q Consensus 937 L~yLH-s~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~ 980 (1137)
|.||| +.||+||||||+|||++. .++|+|||+|..
T Consensus 183 l~~lH~~~givHrDlkp~NILl~~---------~~~liDFG~a~~ 218 (258)
T 1zth_A 183 VKRLYQEAELVHADLSEYNIMYID---------KVYFIDMGQAVT 218 (258)
T ss_dssp HHHHHHTSCEECSSCSTTSEEESS---------SEEECCCTTCEE
T ss_pred HHHHHHHCCEEeCCCCHHHEEEcC---------cEEEEECccccc
Confidence 99999 999999999999999974 499999999864
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.71 E-value=9.7e-20 Score=222.68 Aligned_cols=203 Identities=18% Similarity=0.180 Sum_probs=160.3
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC-------------CC-ccCccccCCCCCcEEE-ccCC
Q 001152 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV-------------LN-LIPKSVGRYEKLRNLK-FFGN 101 (1137)
Q Consensus 37 f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~-------------L~-~IP~~~~~L~~L~~L~-Ls~N 101 (1137)
+..+++|+.|+|++|+|+ .+|..++.+ ++|+.|++++|. +. .+|..+++|++|+.|+ ++.|
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l---~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n 420 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESC---KELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA 420 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHH---HHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHH---HHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhc
Confidence 367889999999999997 567777766 899999997774 33 5577889999999999 7877
Q ss_pred CCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCc
Q 001152 102 EINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP 181 (1137)
Q Consensus 102 ~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~ 181 (1137)
.+..++. +.++.|.+..++. ..|+.|+|++|.+.. +|. ++.|++|+.|+|++|.|+.||.
T Consensus 421 ~~~~L~~----------l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~----lp~-~~~l~~L~~L~Ls~N~l~~lp~ 480 (567)
T 1dce_A 421 YLDDLRS----------KFLLENSVLKMEY-----ADVRVLHLAHKDLTV----LCH-LEQLLLVTHLDLSHNRLRALPP 480 (567)
T ss_dssp HHHHHHH----------HHHHHHHHHHHHH-----TTCSEEECTTSCCSS----CCC-GGGGTTCCEEECCSSCCCCCCG
T ss_pred ccchhhh----------hhhhcccccccCc-----cCceEEEecCCCCCC----CcC-ccccccCcEeecCcccccccch
Confidence 6654433 2333333222221 136777777755433 454 7888899999999999999999
Q ss_pred cccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCcc--CccccCCCCCCEEeccCCcCCCCCccc---ccCC
Q 001152 182 EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL--PSGLYLLQRLENLDLSNNRLTSLGSLD---LCLM 256 (1137)
Q Consensus 182 ~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~I--P~~l~~L~~L~~LdLS~N~Lsg~~p~~---l~~L 256 (1137)
.|+.+++|+.|+|++|+|+.|| .|+.+++|+.|+|++|+|+.+ |..++.+++|+.|+|++|+|++.+|.. +..+
T Consensus 481 ~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~l 559 (567)
T 1dce_A 481 ALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 559 (567)
T ss_dssp GGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHC
T ss_pred hhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHC
Confidence 9999999999999999999998 899999999999999999977 889999999999999999999987732 2348
Q ss_pred CCCCEEEc
Q 001152 257 HNLQNLNL 264 (1137)
Q Consensus 257 ~~L~~L~L 264 (1137)
++|+.|+|
T Consensus 560 p~L~~L~l 567 (567)
T 1dce_A 560 PSVSSILT 567 (567)
T ss_dssp TTCSEEEC
T ss_pred cccCccCC
Confidence 89999875
No 366
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=4.5e-17 Score=171.40 Aligned_cols=150 Identities=19% Similarity=0.254 Sum_probs=95.4
Q ss_pred CCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001152 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n 147 (1137)
++|+.|+|++|.++.+| .+..+++|++|+|++|.++.++ .+..+++|++|+|++|.+..
T Consensus 44 ~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~------------------- 102 (197)
T 4ezg_A 44 NSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTS------------------- 102 (197)
T ss_dssp HTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBG-------------------
T ss_pred CCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCc-------------------
Confidence 66777777777777777 5777777777777777666554 56667777777776665332
Q ss_pred CCCCCcccchhhhcCCCCCcEEeccCCCCc-ccCccccCCCCCCEEEccCCC-CCccchhhcCCCCCCEEEccCCCCCcc
Q 001152 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIR-YLPPEIGCLSNLEQLDLSFNK-MKYLPTEICYLKALISLKVANNKLVEL 225 (1137)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~-L~~LP~~l~~L~~L~~L~Ls~N~Ls~I 225 (1137)
..|..+..+++|++|++++|+++ ..|..++.+++|++|+|++|+ ++.+| .+..+++|+.|+|++|+++.+
T Consensus 103 -------~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~ 174 (197)
T 4ezg_A 103 -------DKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY 174 (197)
T ss_dssp -------GGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC
T ss_pred -------ccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh
Confidence 11223444555666666666665 345556666666777777666 66665 566667777777777777666
Q ss_pred CccccCCCCCCEEeccCCcCCC
Q 001152 226 PSGLYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 226 P~~l~~L~~L~~LdLS~N~Lsg 247 (1137)
| .+..+++|+.|+|++|++.+
T Consensus 175 ~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 175 R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp T-TGGGCSSCCEEEECBC----
T ss_pred H-HhccCCCCCEEEeeCcccCC
Confidence 5 56666777777777776653
No 367
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.71 E-value=7.3e-17 Score=173.28 Aligned_cols=149 Identities=21% Similarity=0.276 Sum_probs=100.5
Q ss_pred cEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccc-cccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCC
Q 001152 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPP 149 (1137)
Q Consensus 71 ~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~l 149 (1137)
+.+++++|.|+.||..+. ++|+.|+|++|+|+.+|. .|.++++|+.|+|++|.+..
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~--------------------- 70 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE--------------------- 70 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCE---------------------
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCC---------------------
Confidence 456666666666665544 456666666666665543 35555555555555444321
Q ss_pred CCCcccchhhhcCCCCCcEEeccCCCCcccCcc-ccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCc
Q 001152 150 RPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS 227 (1137)
Q Consensus 150 n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1137)
..|..|.++++|++|+|++|+|+.+|.. |..+++|++|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|.
T Consensus 71 -----~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 71 -----LAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp -----ECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred -----cCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 1234556667777777777777777764 57788888888888888866 4567788888888888888887765
Q ss_pred c-ccCCCCCCEEeccCCcCCC
Q 001152 228 G-LYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 228 ~-l~~L~~L~~LdLS~N~Lsg 247 (1137)
. +..+++|+.|+|++|.+..
T Consensus 146 ~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 146 GTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTTCTTCCEEECCSSCEEC
T ss_pred HHHhCCCCCCEEEeCCCCcCC
Confidence 4 6678888888888888764
No 368
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.71 E-value=3.9e-17 Score=188.28 Aligned_cols=172 Identities=23% Similarity=0.232 Sum_probs=122.2
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-cc-CCCCCcEEEccCCCCCcccc-cccCCCCCCEEE
Q 001152 44 SVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VG-RYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQ 120 (1137)
Q Consensus 44 ~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~-~~-~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~ 120 (1137)
+++++++|+|+.++.. +. ..|+.|+|++|+|+.+|.. |. ++++|++|+|++|+|+.+|. .|.++++|++|+
T Consensus 21 ~~l~c~~~~l~~iP~~-~~-----~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 94 (361)
T 2xot_A 21 NILSCSKQQLPNVPQS-LP-----SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLD 94 (361)
T ss_dssp TEEECCSSCCSSCCSS-CC-----TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CEEEeCCCCcCccCcc-CC-----CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEE
Confidence 5889999998875432 22 4588999999999988654 55 88999999999999998764 588888888888
Q ss_pred ccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCccc-CccccCCCCCCEEEccCCCC
Q 001152 121 IKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKM 199 (1137)
Q Consensus 121 Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~L 199 (1137)
|++|.+..++. ..|.++++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|
T Consensus 95 Ls~N~l~~~~~--------------------------~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 148 (361)
T 2xot_A 95 LSSNHLHTLDE--------------------------FLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI 148 (361)
T ss_dssp CCSSCCCEECT--------------------------TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCcCCcCCH--------------------------HHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcC
Confidence 88777544331 2344566666777777777655 44667777777777777777
Q ss_pred Cccchhh----cCCCCCCEEEccCCCCCccCc-cccCCCC--CCEEeccCCcCCC
Q 001152 200 KYLPTEI----CYLKALISLKVANNKLVELPS-GLYLLQR--LENLDLSNNRLTS 247 (1137)
Q Consensus 200 ~~LP~~l----~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~--L~~LdLS~N~Lsg 247 (1137)
+.+|..+ ..+++|+.|+|++|+|+.+|. .+..++. |+.|+|++|.+..
T Consensus 149 ~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 149 SRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 7777554 457777777777777777764 3555665 3677888887763
No 369
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.69 E-value=1.8e-16 Score=170.15 Aligned_cols=151 Identities=16% Similarity=0.193 Sum_probs=89.2
Q ss_pred cEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccc--cccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001152 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPS--EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1137)
Q Consensus 71 ~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~--~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ 148 (1137)
+.|++++|.|+.||..+.. .+++|+|++|+|+.++. .|.++++|+.|+|++|.+..++
T Consensus 14 ~~l~~s~n~l~~iP~~~~~--~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~------------------ 73 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIE------------------ 73 (220)
T ss_dssp TEEECCSSCCSSCCSCCCT--TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEEC------------------
T ss_pred CEeEeCCCCcccCccCCCC--CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEEC------------------
Confidence 3556666666666554432 34566666666655422 2555666666665555433222
Q ss_pred CCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-
Q 001152 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL- 225 (1137)
Q Consensus 149 ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~I- 225 (1137)
+..|.++++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+
T Consensus 74 --------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 145 (220)
T 2v70_A 74 --------EGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 145 (220)
T ss_dssp --------TTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBC
T ss_pred --------HHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEEC
Confidence 1133445555566666666665554 356666777777777777655 45566677777777777777755
Q ss_pred CccccCCCCCCEEeccCCcCCCCC
Q 001152 226 PSGLYLLQRLENLDLSNNRLTSLG 249 (1137)
Q Consensus 226 P~~l~~L~~L~~LdLS~N~Lsg~~ 249 (1137)
|..|..+++|+.|+|++|.|++..
T Consensus 146 ~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 146 PGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TTTTTTCTTCCEEECCSCCEECSG
T ss_pred HHHhcCCCCCCEEEecCcCCcCCC
Confidence 556666777777777777776543
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=4.6e-18 Score=213.78 Aligned_cols=195 Identities=22% Similarity=0.123 Sum_probs=122.2
Q ss_pred CCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001152 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n 147 (1137)
+.++.|.|..|.+..+|..+ |+.|+|+.|.|..+ ++..|.+...+..+..+..|+.|+|++|
T Consensus 173 ~~~~~l~L~~n~~~~~~~~~-----l~~l~Ls~~~i~~~-------------~~~~n~~~~~~~~~~~l~~L~~L~Ls~n 234 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQAL-----LQHKKLSQYSIDED-------------DDIENRMVMPKDSKYDDQLWHALDLSNL 234 (727)
T ss_dssp -------------------------------------------------------------------CCCCCCEEECTTS
T ss_pred CccceEEeeCCCCCcchhhH-----hhcCccCcccccCc-------------cccccceecChhhhccCCCCcEEECCCC
Confidence 45777888888777765443 34455555555432 2334444555666777777777888775
Q ss_pred CCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001152 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1137)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1137)
.+. .+|..+..|++|+.|+|++|.|+.||..|+.|++|++|+|++|+|+.||..|+.|++|++|+|++|.|+.||.
T Consensus 235 ~l~----~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~lp~ 310 (727)
T 4b8c_D 235 QIF----NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPW 310 (727)
T ss_dssp CCS----CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCCCCCS
T ss_pred CCC----CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCCccCh
Confidence 443 5666777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCEEeccCCcCCCCCcccccCCCC-CCEEEccCCcCCCCCCCCcchh-hccCCC
Q 001152 228 GLYLLQRLENLDLSNNRLTSLGSLDLCLMHN-LQNLNLQYNKLLSYCQVPSWIC-CNLEGN 286 (1137)
Q Consensus 228 ~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~-L~~L~Ls~N~L~~~~~iP~~~~-~~l~~n 286 (1137)
.|+.|++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++ .+|..+. +.++.|
T Consensus 311 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~--~~p~~l~~l~l~~n 369 (727)
T 4b8c_D 311 EFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI--PLPHERRFIEINTD 369 (727)
T ss_dssp STTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCC---------
T ss_pred hhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC--cCccccceeEeecc
Confidence 9999999999999999999999987765432 2358899999998 7777665 334443
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=6.8e-16 Score=162.04 Aligned_cols=134 Identities=19% Similarity=0.295 Sum_probs=113.1
Q ss_pred CEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCcc--ccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEE
Q 001152 140 KELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE--IGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLK 216 (1137)
Q Consensus 140 ~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~--l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~ 216 (1137)
+.|++++|.+ ..+|..+. .+|+.|++++|+|+.+|.. |+.+++|++|+|++|+|+.+ |..|..+++|+.|+
T Consensus 11 ~~l~~s~~~l----~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 11 TTVDCTGRGL----KEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TEEECTTSCC----SSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CEEEcCCCCc----CcCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 4566666443 33444443 2789999999999988763 89999999999999999976 77899999999999
Q ss_pred ccCCCCCccCcc-ccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcch
Q 001152 217 VANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWI 279 (1137)
Q Consensus 217 Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~ 279 (1137)
|++|+|+.+|.. +..+++|+.|+|++|+|++++|..|..+++|+.|+|++|+|+|.|.+....
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~ 148 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA 148 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH
Confidence 999999977654 888999999999999999999999999999999999999999987765443
No 372
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.63 E-value=8.5e-17 Score=196.27 Aligned_cols=253 Identities=16% Similarity=-0.004 Sum_probs=150.7
Q ss_pred CCcccccCCCCCCcccCC----CCCCCCCCCCEEEccCCCCCCCCccc------------------------ccCCCCCC
Q 001152 17 PIKEKLPSEANKINNEKN----GSVNDDDDDSVIDVSGKTVDFPLIES------------------------YGNRGGDN 68 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~----~~f~~l~~L~~LdLs~N~L~~~~p~~------------------------~~~l~~L~ 68 (1137)
+.++.|.+..|.++.+.. ..+.++++|++|+|++|.+.+ ++.. +..+..++
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~ 270 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPR 270 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCT
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccc
Confidence 367777777777764432 234466777777777776654 2222 23344445
Q ss_pred CccEEEeecCCCCccCccccCCCCCcEEEccCCCCC--cccccccCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECC
Q 001152 69 SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEIN--LFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELS 145 (1137)
Q Consensus 69 ~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~--~lP~~l~~L~~L~~L~Ls~N~-~~~~~~~~~~L~~L~~L~Ls 145 (1137)
+|+.|+++++....+|..+..+++|++|+|++|.++ .++..+.++++|+.|+|+++. ...++..+..+++|++|+++
T Consensus 271 ~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 271 KLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp TCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred cccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 666666666555567777777888888888888876 333446777788888777221 11122334567778888887
Q ss_pred C--------CCCCCCcc-cchhhhcCCCCCcEEeccCCCCc-ccCccccC-CCCCCEEEcc----CCCCCccc------h
Q 001152 146 K--------VPPRPSVL-TLLSEIAGLKCLTKLSVCHFSIR-YLPPEIGC-LSNLEQLDLS----FNKMKYLP------T 204 (1137)
Q Consensus 146 ~--------n~ln~~~~-~lp~~l~~L~~L~~L~Ls~N~L~-~IP~~l~~-L~~L~~L~Ls----~N~L~~LP------~ 204 (1137)
+ +..+.... .++..+..+++|+.|+++.|.++ ..+..++. +++|+.|+|+ .|+++..| .
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~ 430 (592)
T 3ogk_B 351 RGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS 430 (592)
T ss_dssp CCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH
T ss_pred cCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH
Confidence 3 00011111 12222345777777777777776 33344443 7777888775 66776533 2
Q ss_pred hhcCCCCCCEEEccCC--CCC-ccCcccc-CCCCCCEEeccCCcCCCC-CcccccCCCCCCEEEccCCcCC
Q 001152 205 EICYLKALISLKVANN--KLV-ELPSGLY-LLQRLENLDLSNNRLTSL-GSLDLCLMHNLQNLNLQYNKLL 270 (1137)
Q Consensus 205 ~l~~L~~L~~L~Ls~N--~Ls-~IP~~l~-~L~~L~~LdLS~N~Lsg~-~p~~l~~L~~L~~L~Ls~N~L~ 270 (1137)
.+..+++|+.|+|+++ .++ ..+..++ .+++|+.|+|++|++++. .+..+..+++|+.|+|++|+|+
T Consensus 431 ~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 431 LLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp HHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred HHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 3555777777777643 355 3333343 367777777777777642 2334466777777777777764
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=8.7e-16 Score=174.57 Aligned_cols=222 Identities=12% Similarity=0.104 Sum_probs=139.7
Q ss_pred CCCCCEEEccCCCCC--CCCcccc---------------cCCCC--------CCCccEEEeecCCCCccCc-cccCCCCC
Q 001152 40 DDDDSVIDVSGKTVD--FPLIESY---------------GNRGG--------DNSVEGLYLYKNVLNLIPK-SVGRYEKL 93 (1137)
Q Consensus 40 l~~L~~LdLs~N~L~--~~~p~~~---------------~~l~~--------L~~L~~L~Ls~N~L~~IP~-~~~~L~~L 93 (1137)
+++|++|||++|+|. ......+ ..|.+ +++|+.|+|.+ .++.|++ .|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 788999999999988 1111000 11233 46677777766 5666654 46667777
Q ss_pred cEEEccCCCCCccccc-ccCCCCCCEEEccCCC-----CCCCcccccCCCCCC-EEECCCCCC-----------------
Q 001152 94 RNLKFFGNEINLFPSE-VGNLLGLECLQIKISS-----PGVNGFALNKLKGLK-ELELSKVPP----------------- 149 (1137)
Q Consensus 94 ~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~-----~~~~~~~~~~L~~L~-~L~Ls~n~l----------------- 149 (1137)
+.|+|++|.++.|+.. |.++.+|..|.+..+. ..+....|.++.+|+ .+.+.....
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 7777777776666443 5555555555444311 112223344444444 222221000
Q ss_pred ----CCCcccchhhh-cCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccc-hhhcCCCCCC-EEEccCCC
Q 001152 150 ----RPSVLTLLSEI-AGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALI-SLKVANNK 221 (1137)
Q Consensus 150 ----n~~~~~lp~~l-~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~-~L~Ls~N~ 221 (1137)
......-...+ ..+++|+.|+|++|+++.||. .|..+++|+.|+|.+| ++.|+ ..|.+|.+|+ .|+|.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 00000000011 137788888888888888877 6788888888888887 87776 4577888888 888888 7
Q ss_pred CCccC-ccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEc
Q 001152 222 LVELP-SGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNL 264 (1137)
Q Consensus 222 Ls~IP-~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~L 264 (1137)
++.|+ ..|.+|++|+.|+|++|+++.+.+..|.++++|+.|+.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 88886 45667888888888888888888888888888888764
No 374
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=159.71 Aligned_cols=136 Identities=21% Similarity=0.256 Sum_probs=115.0
Q ss_pred CEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEcc
Q 001152 140 KELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVA 218 (1137)
Q Consensus 140 ~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls 218 (1137)
+.+++++|.+. .+|..+. ++|+.|++++|+|+.+|..|..+++|++|+|++|+|+.++ ..|.++++|+.|+|+
T Consensus 13 ~~l~~~~~~l~----~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 13 TVVRCSNKGLK----VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp TEEECTTSCCS----SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCCC----cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECC
Confidence 34555554332 3343332 4789999999999999999999999999999999999886 568999999999999
Q ss_pred CCCCCccCc-cccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhh
Q 001152 219 NNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICC 281 (1137)
Q Consensus 219 ~N~Ls~IP~-~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1137)
+|+|+.+|. .|..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|.+.....|
T Consensus 87 ~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~ 150 (193)
T 2wfh_A 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDW 150 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHH
T ss_pred CCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHH
Confidence 999998865 588899999999999999999988899999999999999999998886555444
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=3.5e-15 Score=152.47 Aligned_cols=133 Identities=20% Similarity=0.128 Sum_probs=70.1
Q ss_pred CCccEEEeecCCCC--ccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECC
Q 001152 68 NSVEGLYLYKNVLN--LIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELS 145 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~--~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls 145 (1137)
++|+.|+|++|.++ .+|..+..+++|++|+|++|.|+.+ ..+..+++|++|+|++|.+..
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~----------------- 85 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFG----------------- 85 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCS-----------------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCch-----------------
Confidence 45666666666665 5666566666666666666666555 444444444444444443222
Q ss_pred CCCCCCCcccchhhhcCCCCCcEEeccCCCCcccC--ccccCCCCCCEEEccCCCCCccch----hhcCCCCCCEEEccC
Q 001152 146 KVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLP--PEIGCLSNLEQLDLSFNKMKYLPT----EICYLKALISLKVAN 219 (1137)
Q Consensus 146 ~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP--~~l~~L~~L~~L~Ls~N~L~~LP~----~l~~L~~L~~L~Ls~ 219 (1137)
.+|..+..+++|+.|++++|.|+.+| ..+..+++|++|+|++|.|+.+|. .+..+++|+.|++++
T Consensus 86 ---------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 86 ---------GLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp ---------CCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ---------HHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 12223333455555555555555444 345555555555555555555443 445555555555555
Q ss_pred CCCCccCc
Q 001152 220 NKLVELPS 227 (1137)
Q Consensus 220 N~Ls~IP~ 227 (1137)
|.+..+|.
T Consensus 157 n~~~~~~~ 164 (168)
T 2ell_A 157 REDQEAPD 164 (168)
T ss_dssp TTSCBCCS
T ss_pred CChhhccc
Confidence 55555543
No 376
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=4.8e-14 Score=165.21 Aligned_cols=228 Identities=11% Similarity=0.107 Sum_probs=187.1
Q ss_pred CCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCCCCcEEEccCCCCCc
Q 001152 27 NKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLKFFGNEINL 105 (1137)
Q Consensus 27 N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP-~~~~~L~~L~~L~Ls~N~L~~ 105 (1137)
|+++.|...+|.+. +|+.++|..| ++.+...+|.+. +|+.+.|.+ .++.|+ ..|.++++|+.|+|.+|.++.
T Consensus 122 ~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~----~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~ 194 (401)
T 4fdw_A 122 NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS----TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK 194 (401)
T ss_dssp TTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC----CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE
T ss_pred CccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC----CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE
Confidence 57899999999985 8999999877 777777667553 699999986 688886 479999999999999999999
Q ss_pred ccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccch-hhhcCCCCCcEEeccCCCCcccCc-cc
Q 001152 106 FPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLL-SEIAGLKCLTKLSVCHFSIRYLPP-EI 183 (1137)
Q Consensus 106 lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp-~~l~~L~~L~~L~Ls~N~L~~IP~-~l 183 (1137)
||.......+|+.+.|..|-..+...+|.++.+|+.|++..+ . ..++ .+|.+ .+|+.+.+ .|.++.|+. .|
T Consensus 195 I~~~aF~~~~L~~l~lp~~l~~I~~~aF~~~~~L~~l~l~~~----l-~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF 267 (401)
T 4fdw_A 195 LPASTFVYAGIEEVLLPVTLKEIGSQAFLKTSQLKTIEIPEN----V-STIGQEAFRE-SGITTVKL-PNGVTNIASRAF 267 (401)
T ss_dssp ECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCCEECCTT----C-CEECTTTTTT-CCCSEEEE-ETTCCEECTTTT
T ss_pred echhhEeecccCEEEeCCchheehhhHhhCCCCCCEEecCCC----c-cCcccccccc-CCccEEEe-CCCccEEChhHh
Confidence 988766679999999985533344478999999999999862 2 2333 34555 78999999 566788866 78
Q ss_pred cCCCCCCEEEccCCCCC-----ccc-hhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCCCCcccccCC
Q 001152 184 GCLSNLEQLDLSFNKMK-----YLP-TEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1137)
Q Consensus 184 ~~L~~L~~L~Ls~N~L~-----~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~~p~~l~~L 256 (1137)
.++++|+.|+|.+|.+. .|+ ..|.+|++|+.+.|. |.++.|+.. |.+|++|+.|+|.+| ++.+.+..|.++
T Consensus 268 ~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 268 YYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp TTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS
T ss_pred hCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC
Confidence 99999999999998876 565 568889999999999 559999765 667999999999665 888888899999
Q ss_pred CCCCEEEccCCcCCC
Q 001152 257 HNLQNLNLQYNKLLS 271 (1137)
Q Consensus 257 ~~L~~L~Ls~N~L~~ 271 (1137)
+|+.|++.+|.+..
T Consensus 346 -~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 346 -GIKEVKVEGTTPPQ 359 (401)
T ss_dssp -CCCEEEECCSSCCB
T ss_pred -CCCEEEEcCCCCcc
Confidence 99999999998755
No 377
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.58 E-value=2.4e-16 Score=192.28 Aligned_cols=239 Identities=17% Similarity=0.047 Sum_probs=122.4
Q ss_pred cccccCCCCC-CcccCC-CCCCCCCCCCEEEccCCCCCCC----CcccccCCCCCCCccEEEeecCCCC-----ccCccc
Q 001152 19 KEKLPSEANK-INNEKN-GSVNDDDDDSVIDVSGKTVDFP----LIESYGNRGGDNSVEGLYLYKNVLN-----LIPKSV 87 (1137)
Q Consensus 19 l~~L~~~~N~-i~~l~~-~~f~~l~~L~~LdLs~N~L~~~----~p~~~~~l~~L~~L~~L~Ls~N~L~-----~IP~~~ 87 (1137)
++.|.+..+. ++.... ..+.++++|++|+|++|.+++. ++..+.. +++|+.|+|++|.++ .++..+
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~---~~~L~~L~L~~n~~~~~~~~~l~~~~ 216 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQH---NTSLEVLNFYMTEFAKISPKDLETIA 216 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHH---CCCCCEEECTTCCCSSCCHHHHHHHH
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhc---CCCccEEEeeccCCCccCHHHHHHHH
Confidence 6666665554 111100 1123566777777777766554 2222332 366777777777665 233344
Q ss_pred cCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCC----CCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCC
Q 001152 88 GRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSP----GVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGL 163 (1137)
Q Consensus 88 ~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~----~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L 163 (1137)
.++++|+.|+|++|.+..+|..+.++++|+.|+++.... ......+..+++|+.|+++++ ....+|..+..+
T Consensus 217 ~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~----~~~~l~~~~~~~ 292 (592)
T 3ogk_B 217 RNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM----GPNEMPILFPFA 292 (592)
T ss_dssp HHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC----CTTTGGGGGGGG
T ss_pred hhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcccc----chhHHHHHHhhc
Confidence 566777777777777766666666667777766653221 112233445555666665542 223344444555
Q ss_pred CCCcEEeccCCCCc--ccCccccCCCCCCEEEccCCCCC--ccchhhcCCCCCCEEEcc-----------CCCCC--ccC
Q 001152 164 KCLTKLSVCHFSIR--YLPPEIGCLSNLEQLDLSFNKMK--YLPTEICYLKALISLKVA-----------NNKLV--ELP 226 (1137)
Q Consensus 164 ~~L~~L~Ls~N~L~--~IP~~l~~L~~L~~L~Ls~N~L~--~LP~~l~~L~~L~~L~Ls-----------~N~Ls--~IP 226 (1137)
++|++|++++|.++ .++..+..+++|+.|+|+ |.+. .++..+..+++|+.|+|+ .|.++ .++
T Consensus 293 ~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~ 371 (592)
T 3ogk_B 293 AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 (592)
T ss_dssp GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHH
T ss_pred CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHH
Confidence 56666666666554 122223555555555555 3333 233333445555555555 24444 222
Q ss_pred ccccCCCCCCEEeccCCcCCCCCcccccC-CCCCCEEEcc
Q 001152 227 SGLYLLQRLENLDLSNNRLTSLGSLDLCL-MHNLQNLNLQ 265 (1137)
Q Consensus 227 ~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~-L~~L~~L~Ls 265 (1137)
.-+..+++|+.|+|+.|++++.....+.. +++|+.|+|+
T Consensus 372 ~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 22333555555555555555443333433 5555555553
No 378
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.57 E-value=3.9e-15 Score=172.44 Aligned_cols=148 Identities=19% Similarity=0.185 Sum_probs=101.8
Q ss_pred ceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCC--------------hHHHHHhHHhHHHHHHHHHhCCCCCcc
Q 001152 804 LSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSS--------------ADEIRNFEYSCLGEVRMLGALRHSCIV 868 (1137)
Q Consensus 804 y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~--------------~~~~e~~~~~~lrEi~iL~~L~HpNIV 868 (1137)
|++...||.|++|.||+|... +..+|||+.+....... .........++.+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 789999999999999999974 57899999754322110 011112222345677778777655443
Q ss_pred --eeeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Q 001152 869 --EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIM 946 (1137)
Q Consensus 869 --kllg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~gII 946 (1137)
..+++ . ..+|||||++|++|..+. ....+..++.||+.+|.|||++|||
T Consensus 177 vp~p~~~--~----------------~~~LVME~i~G~~L~~l~-----------~~~~~~~l~~qll~~l~~lH~~gIV 227 (397)
T 4gyi_A 177 VPEPIAQ--S----------------RHTIVMSLVDALPMRQVS-----------SVPDPASLYADLIALILRLAKHGLI 227 (397)
T ss_dssp CCCEEEE--E----------------TTEEEEECCSCEEGGGCC-----------CCSCHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCeeeec--c----------------CceEEEEecCCccHhhhc-----------ccHHHHHHHHHHHHHHHHHHHCCCc
Confidence 22222 1 127999999988875432 1123457889999999999999999
Q ss_pred eccCCCCCeEeccccccCCCC---CeEEEeecCcccc
Q 001152 947 HRDIKSENILIDLERKKADGK---PVVKLCDFDRAVP 980 (1137)
Q Consensus 947 HrDLKP~NILld~~~~~~~~~---~~vKL~DFGla~~ 980 (1137)
||||||.|||++.+....... ..+.|+||+-+..
T Consensus 228 HrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 228 HGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 999999999999874211111 1388999997654
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.56 E-value=7.4e-15 Score=150.01 Aligned_cols=138 Identities=17% Similarity=0.097 Sum_probs=108.2
Q ss_pred CCCCCCEEEccCCCCC-CCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCc-ccccccCCCCC
Q 001152 39 DDDDDSVIDVSGKTVD-FPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINL-FPSEVGNLLGL 116 (1137)
Q Consensus 39 ~l~~L~~LdLs~N~L~-~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~-lP~~l~~L~~L 116 (1137)
..++|+.|+|++|+|+ +.+|..+..+ ++|++|+|++|.|+.+ ..|..+++|++|+|++|.|+. +|..+.++++|
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l---~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 97 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEF---VNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNL 97 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGG---GGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhC---CCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCC
Confidence 3478999999999998 7778766555 9999999999999988 789999999999999999997 78777789999
Q ss_pred CEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCc----cccCCCCCCEE
Q 001152 117 ECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP----EIGCLSNLEQL 192 (1137)
Q Consensus 117 ~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~----~l~~L~~L~~L 192 (1137)
++|+|++|.+..++. +..+..+++|+.|++++|.++.+|. .+..+++|++|
T Consensus 98 ~~L~Ls~N~l~~~~~-------------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 152 (168)
T 2ell_A 98 THLNLSGNKLKDIST-------------------------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL 152 (168)
T ss_dssp CEEECBSSSCCSSGG-------------------------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEE
T ss_pred CEEeccCCccCcchh-------------------------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEe
Confidence 999998887665441 1244556666667777777766665 56677777777
Q ss_pred EccCCCCCccchh
Q 001152 193 DLSFNKMKYLPTE 205 (1137)
Q Consensus 193 ~Ls~N~L~~LP~~ 205 (1137)
++++|.+.++|.+
T Consensus 153 ~l~~n~~~~~~~~ 165 (168)
T 2ell_A 153 DGYDREDQEAPDS 165 (168)
T ss_dssp TTEETTSCBCCSS
T ss_pred cCCCCChhhcccc
Confidence 7777777766643
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=1e-13 Score=162.53 Aligned_cols=248 Identities=8% Similarity=0.057 Sum_probs=198.5
Q ss_pred hhhcccCCCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc
Q 001152 7 VEITQKSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS 86 (1137)
Q Consensus 7 ~~~~~~~~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~ 86 (1137)
+.-.++..+ .+..+.+..| |+.|...+|.+. +|+.|+|.. .++.+...+|. ++.+|+.|+|.+|.++.||..
T Consensus 127 I~~~aF~~~--~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~---~c~~L~~l~l~~n~l~~I~~~ 198 (401)
T 4fdw_A 127 IPKDAFRNS--QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFY---YCYNLKKADLSKTKITKLPAS 198 (401)
T ss_dssp ECTTTTTTC--CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTT---TCTTCCEEECTTSCCSEECTT
T ss_pred ehHhhcccC--CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhh---CcccCCeeecCCCcceEechh
Confidence 334455554 4788887655 999999999994 799999986 77776666664 459999999999999999876
Q ss_pred ccCCCCCcEEEccCCCCCcccc-cccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCC
Q 001152 87 VGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKC 165 (1137)
Q Consensus 87 ~~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~ 165 (1137)
.....+|+.|.|.+ .++.|+. .|.++++|+.|.|..|-..+-..+|.+ .+|+.+.+.+ +....-...|.+|++
T Consensus 199 aF~~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~l~~I~~~aF~~-~~L~~i~lp~----~i~~I~~~aF~~c~~ 272 (401)
T 4fdw_A 199 TFVYAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPENVSTIGQEAFRE-SGITTVKLPN----GVTNIASRAFYYCPE 272 (401)
T ss_dssp TTTTCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTTCCEECTTTTTT-CCCSEEEEET----TCCEECTTTTTTCTT
T ss_pred hEeecccCEEEeCC-chheehhhHhhCCCCCCEEecCCCccCcccccccc-CCccEEEeCC----CccEEChhHhhCCCC
Confidence 44468999999985 4888865 488999999999987643334466777 8999999954 222222457889999
Q ss_pred CcEEeccCCCCc-----ccCc-cccCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCE
Q 001152 166 LTKLSVCHFSIR-----YLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLEN 237 (1137)
Q Consensus 166 L~~L~Ls~N~L~-----~IP~-~l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~ 237 (1137)
|+.|.+.+|.+. .|+. .|..+++|+.|+|. |.++.|+ ..|.+|++|+.|.|..| ++.|+. .|.++ +|+.
T Consensus 273 L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~ 349 (401)
T 4fdw_A 273 LAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKE 349 (401)
T ss_dssp CCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCE
T ss_pred CCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCE
Confidence 999999998876 5665 78999999999999 5699886 56788999999999655 888865 46678 9999
Q ss_pred EeccCCcCCCCCcccccCCC-CCCEEEccCCcCCC
Q 001152 238 LDLSNNRLTSLGSLDLCLMH-NLQNLNLQYNKLLS 271 (1137)
Q Consensus 238 LdLS~N~Lsg~~p~~l~~L~-~L~~L~Ls~N~L~~ 271 (1137)
|+|++|.+..+.+..|..++ .+..|++..|.+..
T Consensus 350 l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 350 VKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEK 384 (401)
T ss_dssp EEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHH
T ss_pred EEEcCCCCcccccccccCCCCCccEEEeCHHHHHH
Confidence 99999999999888888885 78999999887543
No 381
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.54 E-value=8.8e-15 Score=153.56 Aligned_cols=125 Identities=22% Similarity=0.227 Sum_probs=64.3
Q ss_pred cEEEeecCCCCccCccccCCCCCcEEEccCCCCCccccc--ccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001152 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSE--VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1137)
Q Consensus 71 ~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~lP~~--l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ 148 (1137)
+.|++++|.|+.||..+.. +|++|+|++|+|+.+|.. |+++++|++|+|++|.+..+
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~------------------- 69 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI------------------- 69 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCB-------------------
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCc-------------------
Confidence 4566666666666665543 666666666666655432 44444444444444432221
Q ss_pred CCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCC
Q 001152 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLV 223 (1137)
Q Consensus 149 ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls 223 (1137)
.|..|.++++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+ |..|..+++|+.|+|++|.++
T Consensus 70 -------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 70 -------EPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp -------CTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred -------CHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 12334444455555555555554433 345555555555555555533 444455555555555555554
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.54 E-value=7.7e-15 Score=146.87 Aligned_cols=127 Identities=25% Similarity=0.249 Sum_probs=97.6
Q ss_pred CCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCc-cchhhcCCCCCCEE
Q 001152 137 KGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKY-LPTEICYLKALISL 215 (1137)
Q Consensus 137 ~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~-LP~~l~~L~~L~~L 215 (1137)
++|+.|++++|.+.. +.+|..+..+++|+.|++++|.++.+ ..++.+++|++|+|++|+|+. +|..+..+++|+.|
T Consensus 17 ~~l~~L~l~~n~l~~--~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNE--GKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBT--TBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCCh--hHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 456666666643320 24555667778888888888888877 667888888888888888886 77777778888888
Q ss_pred EccCCCCCccC--ccccCCCCCCEEeccCCcCCCCCc---ccccCCCCCCEEEccC
Q 001152 216 KVANNKLVELP--SGLYLLQRLENLDLSNNRLTSLGS---LDLCLMHNLQNLNLQY 266 (1137)
Q Consensus 216 ~Ls~N~Ls~IP--~~l~~L~~L~~LdLS~N~Lsg~~p---~~l~~L~~L~~L~Ls~ 266 (1137)
+|++|+++.+| ..+..+++|+.|+|++|.+++.++ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888888765 778888888888888888888876 5678888888888764
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.54 E-value=3.7e-14 Score=149.19 Aligned_cols=64 Identities=28% Similarity=0.436 Sum_probs=31.2
Q ss_pred ccCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCC
Q 001152 183 IGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLT 246 (1137)
Q Consensus 183 l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Ls 246 (1137)
|..+++|++|+|++|+|+.+| ..|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|.+.
T Consensus 74 f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 74 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp TTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 444444444444444444443 2344455555555555555544442 344555555555555554
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.53 E-value=6.8e-14 Score=144.22 Aligned_cols=128 Identities=27% Similarity=0.336 Sum_probs=106.3
Q ss_pred CEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEc
Q 001152 140 KELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKV 217 (1137)
Q Consensus 140 ~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~L 217 (1137)
+.++++++.+. .+|..+ .++|+.|++++|+++.+|. .|..+++|++|+|++|+|+.+|.. +..+++|+.|+|
T Consensus 10 ~~l~~~~~~l~----~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 83 (177)
T 2o6r_A 10 TEIRCNSKGLT----SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYL 83 (177)
T ss_dssp TEEECCSSCCS----SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CEEEecCCCCc----cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEEC
Confidence 45555553332 333332 3578999999999998876 568999999999999999988755 688999999999
Q ss_pred cCCCCCccCcc-ccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCC
Q 001152 218 ANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYC 273 (1137)
Q Consensus 218 s~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~ 273 (1137)
++|+|+.+|.. +..+++|+.|+|++|+|+++++..+..+++|+.|+|++|+|.+.|
T Consensus 84 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 84 HENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99999988765 678999999999999999998877889999999999999999854
No 385
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=4.6e-14 Score=145.36 Aligned_cols=107 Identities=27% Similarity=0.324 Sum_probs=98.5
Q ss_pred CcEEeccCCCCcccCccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCC
Q 001152 166 LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNN 243 (1137)
Q Consensus 166 L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N 243 (1137)
.+.|++++|.|+.||..+. ++|++|+|++|+|+.+ |..|..+++|++|+|++|+|+.+|.. |..+++|+.|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 5789999999999998764 8999999999999988 56789999999999999999999876 578999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001152 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1137)
Q Consensus 244 ~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1137)
+|+++++..|..+++|+.|+|++|+|+|.|.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999999889999999999999999999764
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.8e-14 Score=148.64 Aligned_cols=105 Identities=25% Similarity=0.241 Sum_probs=82.0
Q ss_pred CCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhh-cCCCCCCEEEccCCCCCccCc--cccCCCCCCEEecc
Q 001152 165 CLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEI-CYLKALISLKVANNKLVELPS--GLYLLQRLENLDLS 241 (1137)
Q Consensus 165 ~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l-~~L~~L~~L~Ls~N~Ls~IP~--~l~~L~~L~~LdLS 241 (1137)
+|+.|++++|.|+.+ ..|..+++|++|+|++|+|+.+|..+ ..+++|+.|+|++|+|+.+|. .+..+++|+.|+|+
T Consensus 43 ~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~ 121 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCIL 121 (176)
T ss_dssp CCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECC
T ss_pred CCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEec
Confidence 777888888888776 56777888888888888888777554 778888888888888888776 67778888888888
Q ss_pred CCcCCCCCcc---cccCCCCCCEEEccCCcCC
Q 001152 242 NNRLTSLGSL---DLCLMHNLQNLNLQYNKLL 270 (1137)
Q Consensus 242 ~N~Lsg~~p~---~l~~L~~L~~L~Ls~N~L~ 270 (1137)
+|.++..++. .+..+++|+.|++++|.+.
T Consensus 122 ~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 122 RNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp SSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888876543 3778888888888888754
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2.7e-14 Score=147.40 Aligned_cols=133 Identities=20% Similarity=0.235 Sum_probs=98.8
Q ss_pred cccCCCCCcEEEccCCCCCcccccccCCC-CCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCC
Q 001152 86 SVGRYEKLRNLKFFGNEINLFPSEVGNLL-GLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLK 164 (1137)
Q Consensus 86 ~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~-~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~ 164 (1137)
.+.++.+|+.|+|++|+|+.+|. +..+. +|++|+|++|.+..+ ..+..++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~~----------------------------~~l~~l~ 64 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKL----------------------------DGFPLLR 64 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEE----------------------------CCCCCCS
T ss_pred hcCCcCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCcc----------------------------cccccCC
Confidence 45667788888888888887754 44443 677777666654322 2455677
Q ss_pred CCcEEeccCCCCcccCccc-cCCCCCCEEEccCCCCCccch--hhcCCCCCCEEEccCCCCCccCcc----ccCCCCCCE
Q 001152 165 CLTKLSVCHFSIRYLPPEI-GCLSNLEQLDLSFNKMKYLPT--EICYLKALISLKVANNKLVELPSG----LYLLQRLEN 237 (1137)
Q Consensus 165 ~L~~L~Ls~N~L~~IP~~l-~~L~~L~~L~Ls~N~L~~LP~--~l~~L~~L~~L~Ls~N~Ls~IP~~----l~~L~~L~~ 237 (1137)
+|+.|++++|.|+.+|+.+ ..+++|++|+|++|+|+.+|. .+..+++|+.|+|++|.++.+|.. +..+++|+.
T Consensus 65 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 65 RLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp SCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSE
T ss_pred CCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccce
Confidence 7888888888888777654 778888888888888888876 778888888888888888888775 777888888
Q ss_pred EeccCCcCCC
Q 001152 238 LDLSNNRLTS 247 (1137)
Q Consensus 238 LdLS~N~Lsg 247 (1137)
||++.|.+..
T Consensus 145 Ld~~~n~~~~ 154 (176)
T 1a9n_A 145 LDFQKVKLKE 154 (176)
T ss_dssp ETTEECCHHH
T ss_pred eCCCcCCHHH
Confidence 8888887653
No 388
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=1.4e-13 Score=142.34 Aligned_cols=107 Identities=26% Similarity=0.347 Sum_probs=98.2
Q ss_pred CcEEeccCCCCcccCccccCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCC
Q 001152 166 LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNN 243 (1137)
Q Consensus 166 L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N 243 (1137)
-+.+++++|+|+.||..+. ++|++|+|++|+|+.+ |..|.++++|+.|+|++|+|+.||.. |..+++|+.|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3689999999999999765 8999999999999977 56789999999999999999999887 478999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001152 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1137)
Q Consensus 244 ~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1137)
+|+++++..|..+++|+.|+|++|+|.+.|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9999998779999999999999999999664
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.48 E-value=2.6e-13 Score=139.81 Aligned_cols=90 Identities=31% Similarity=0.363 Sum_probs=64.5
Q ss_pred cCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccCccc-cCCCCCCE
Q 001152 161 AGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGL-YLLQRLEN 237 (1137)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l-~~L~~L~~ 237 (1137)
..+++|++|++++|+|+.+|. .|..+++|++|+|++|+|+.+|.. +..+++|+.|+|++|+|+.+|..+ ..+++|+.
T Consensus 49 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 128 (177)
T 2o6r_A 49 DKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQK 128 (177)
T ss_dssp TTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCE
Confidence 345556666666666666655 356777788888888888776654 567788888888888888777654 56788888
Q ss_pred EeccCCcCCCCCc
Q 001152 238 LDLSNNRLTSLGS 250 (1137)
Q Consensus 238 LdLS~N~Lsg~~p 250 (1137)
|+|++|.+++..|
T Consensus 129 L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 129 IWLHTNPWDCSCP 141 (177)
T ss_dssp EECCSSCBCCCHH
T ss_pred EEecCCCeeccCc
Confidence 8888888887654
No 390
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.48 E-value=4.1e-14 Score=141.58 Aligned_cols=128 Identities=18% Similarity=0.054 Sum_probs=63.7
Q ss_pred CCCCEEEccCCCCC-CCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEEccCCCCCc-ccccccCCCCCCE
Q 001152 41 DDDSVIDVSGKTVD-FPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINL-FPSEVGNLLGLEC 118 (1137)
Q Consensus 41 ~~L~~LdLs~N~L~-~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~Ls~N~L~~-lP~~l~~L~~L~~ 118 (1137)
++|+.|+|++|+++ +.+|..+..+ ++|+.|+|++|.|+.+ ..|..+++|++|+|++|.|+. +|..+.++++|++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l---~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEF---EELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTC---TTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhc---CCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 44555555555554 4444433322 5555555555555544 445555555555555555553 4444444555555
Q ss_pred EEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEecc
Q 001152 119 LQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1137)
Q Consensus 119 L~Ls~N~~~~~~--~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls 172 (1137)
|+|++|.+..++ ..+..+++|++|++++|.+..........+..+++|+.|+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555544433 445555555555555543322111111245556666666654
No 391
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.46 E-value=1.3e-15 Score=185.70 Aligned_cols=201 Identities=15% Similarity=0.110 Sum_probs=125.6
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecC-CCCc--cCccccCCCCCcEEEccCCCCCc-----cccc
Q 001152 38 NDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKN-VLNL--IPKSVGRYEKLRNLKFFGNEINL-----FPSE 109 (1137)
Q Consensus 38 ~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N-~L~~--IP~~~~~L~~L~~L~Ls~N~L~~-----lP~~ 109 (1137)
..+++|++|+|++|.+++..+..+.. .+++|++|+|++| .++. ++..+.++++|++|+|++|.++. ++.-
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~--~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~ 179 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAK--SFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHF 179 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHH--HCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGS
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHH--hCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHH
Confidence 46789999999999988776665541 2489999999998 6664 55556689999999999998763 2333
Q ss_pred ccCCCCCCEEEccCCCCCCCcc----cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCC-------CCcc
Q 001152 110 VGNLLGLECLQIKISSPGVNGF----ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF-------SIRY 178 (1137)
Q Consensus 110 l~~L~~L~~L~Ls~N~~~~~~~----~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N-------~L~~ 178 (1137)
...+++|+.|+|++|....... .+..+++|+.|+++++ .....+|..+..+++|+.|+++.+ .+..
T Consensus 180 ~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~---~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 256 (594)
T 2p1m_B 180 PDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA---VPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG 256 (594)
T ss_dssp CTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT---SCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH
T ss_pred hhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC---CcHHHHHHHHhcCCcceEcccccccCccchhhHHH
Confidence 3477899999999887222222 2345799999999985 234446777777888888875444 2333
Q ss_pred cCccccCCCCCCEE-EccCCCCCccchhhcCCCCCCEEEccCCCCC--ccCccccCCCCCCEEeccCC
Q 001152 179 LPPEIGCLSNLEQL-DLSFNKMKYLPTEICYLKALISLKVANNKLV--ELPSGLYLLQRLENLDLSNN 243 (1137)
Q Consensus 179 IP~~l~~L~~L~~L-~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls--~IP~~l~~L~~L~~LdLS~N 243 (1137)
++..+.++++|+.| .+.++....+|..+..+++|+.|+|++|.++ .++..+..+++|+.|+|++|
T Consensus 257 l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 257 LSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp HHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred HHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 44444555555555 3333333334433344455555555555544 12222334455555555544
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=3.9e-16 Score=164.36 Aligned_cols=110 Identities=26% Similarity=0.263 Sum_probs=78.6
Q ss_pred hhcCCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc--cccCCCCCC
Q 001152 159 EIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS--GLYLLQRLE 236 (1137)
Q Consensus 159 ~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~~L~~L~Ls~N~Ls~IP~--~l~~L~~L~ 236 (1137)
.+..+++|+.|++++|.|+.+|..+..+++|++|+|++|+|+.+| .+..+++|+.|+|++|+|+.+|. .+..+++|+
T Consensus 65 ~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~ 143 (198)
T 1ds9_A 65 SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLE 143 (198)
T ss_dssp CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCS
T ss_pred ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCC
Confidence 445566666777777777777766666677777777777777776 57777777788888777776654 577777888
Q ss_pred EEeccCCcCCCCCccc----------ccCCCCCCEEEccCCcCCC
Q 001152 237 NLDLSNNRLTSLGSLD----------LCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 237 ~LdLS~N~Lsg~~p~~----------l~~L~~L~~L~Ls~N~L~~ 271 (1137)
.|+|++|.+++.+|.. +..+++|+.|| +|+++.
T Consensus 144 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 144 DLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp EEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred EEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 8888888777665532 67788888776 666654
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.43 E-value=5.3e-16 Score=163.36 Aligned_cols=113 Identities=21% Similarity=0.164 Sum_probs=53.8
Q ss_pred ccCccccCCCCCcEEEccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhc
Q 001152 82 LIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIA 161 (1137)
Q Consensus 82 ~IP~~~~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~ 161 (1137)
.+|..|..+++|++|+|++|.|+.+| .+.++++|+.|+|++|.+..+|.. +.
T Consensus 39 ~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~~l~~~---------------------------~~ 90 (198)
T 1ds9_A 39 KMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENL---------------------------DA 90 (198)
T ss_dssp CCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEECSCSSH---------------------------HH
T ss_pred hhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcccccch---------------------------hh
Confidence 33445555555555555555555555 455555555555554443322221 22
Q ss_pred CCCCCcEEeccCCCCcccCccccCCCCCCEEEccCCCCCccch--hhcCCCCCCEEEccCCCCC
Q 001152 162 GLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPT--EICYLKALISLKVANNKLV 223 (1137)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~LP~--~l~~L~~L~~L~Ls~N~Ls 223 (1137)
.+++|+.|++++|+|+.+| .+..+++|++|+|++|+|+.+|. .+..+++|+.|+|++|.++
T Consensus 91 ~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 91 VADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred cCCcCCEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 2233444444444444443 34444455555555555554432 4445555555555555554
No 394
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.42 E-value=1.3e-14 Score=176.89 Aligned_cols=231 Identities=16% Similarity=0.116 Sum_probs=164.9
Q ss_pred CCCCCCCCCEEEccCCCCC---CCCcccc--------cC-CCCCCCccEEEeecCCCCc-cCcccc-CCCCCcEEEccCC
Q 001152 36 SVNDDDDDSVIDVSGKTVD---FPLIESY--------GN-RGGDNSVEGLYLYKNVLNL-IPKSVG-RYEKLRNLKFFGN 101 (1137)
Q Consensus 36 ~f~~l~~L~~LdLs~N~L~---~~~p~~~--------~~-l~~L~~L~~L~Ls~N~L~~-IP~~~~-~L~~L~~L~Ls~N 101 (1137)
.+..+++|+.|+|+++... +..|..+ .. ...+++|++|+|++|.++. .+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 4567788999999997532 1222111 11 1234789999999998873 345554 6889999999998
Q ss_pred -CCCc--ccccccCCCCCCEEEccCCCCCCC-----cccccCCCCCCEEECCCCCCCCCc-ccchhhhcCCCCCcEEecc
Q 001152 102 -EINL--FPSEVGNLLGLECLQIKISSPGVN-----GFALNKLKGLKELELSKVPPRPSV-LTLLSEIAGLKCLTKLSVC 172 (1137)
Q Consensus 102 -~L~~--lP~~l~~L~~L~~L~Ls~N~~~~~-----~~~~~~L~~L~~L~Ls~n~ln~~~-~~lp~~l~~L~~L~~L~Ls 172 (1137)
.++. ++..+.++++|++|+|++|.+... +..+..+++|+.|+++++. .... ..+..-+..+++|+.|+++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~ 219 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLN 219 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECC
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecC
Confidence 6663 666666899999999998874432 2334467799999999865 1121 2233334567999999999
Q ss_pred CC-CCcccCccccCCCCCCEEEccCC-------CCCccchhhcCCCCCCEE-EccCCCCCccCccccCCCCCCEEeccCC
Q 001152 173 HF-SIRYLPPEIGCLSNLEQLDLSFN-------KMKYLPTEICYLKALISL-KVANNKLVELPSGLYLLQRLENLDLSNN 243 (1137)
Q Consensus 173 ~N-~L~~IP~~l~~L~~L~~L~Ls~N-------~L~~LP~~l~~L~~L~~L-~Ls~N~Ls~IP~~l~~L~~L~~LdLS~N 243 (1137)
+| .++.+|..+..+++|+.|+++.+ .+..++..+.++++|+.| .+.++....+|..+..+++|+.|+|++|
T Consensus 220 ~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~ 299 (594)
T 2p1m_B 220 RAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYA 299 (594)
T ss_dssp TTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTC
T ss_pred CCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCC
Confidence 88 55577888888999999996554 445677788999999999 5555554567776667899999999999
Q ss_pred cCCCCCcc-cccCCCCCCEEEccCC
Q 001152 244 RLTSLGSL-DLCLMHNLQNLNLQYN 267 (1137)
Q Consensus 244 ~Lsg~~p~-~l~~L~~L~~L~Ls~N 267 (1137)
.+++.... .+..+++|+.|+|++|
T Consensus 300 ~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 300 TVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp CCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred CCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 97753222 3568899999999988
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.39 E-value=3.5e-13 Score=153.01 Aligned_cols=214 Identities=12% Similarity=0.015 Sum_probs=160.0
Q ss_pred CCcccccCCCCCCc--------------------ccCCCCCCC--------CCCCCEEEccCCCCCCCCcccccCCCCCC
Q 001152 17 PIKEKLPSEANKIN--------------------NEKNGSVND--------DDDDSVIDVSGKTVDFPLIESYGNRGGDN 68 (1137)
Q Consensus 17 ~~l~~L~~~~N~i~--------------------~l~~~~f~~--------l~~L~~LdLs~N~L~~~~p~~~~~l~~L~ 68 (1137)
+.++.|++..|+|. .|+..+|.+ +++|+.|+|.+ +++.+.+.+|.+ ++
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~---~~ 124 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKG---CD 124 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTT---CT
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhc---Cc
Confidence 35777888877777 778889999 99999999999 888877766654 49
Q ss_pred CccEEEeecCCCCccCc-cccCCCCCcEEEccCCC----CCcc-cccccCCCCCC-------------------------
Q 001152 69 SVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNE----INLF-PSEVGNLLGLE------------------------- 117 (1137)
Q Consensus 69 ~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~----L~~l-P~~l~~L~~L~------------------------- 117 (1137)
+|+.|+|++|.++.|++ .|.++.+|..|.+..+. +..+ +..|.++.+|+
T Consensus 125 ~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~ 204 (329)
T 3sb4_A 125 NLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDI 204 (329)
T ss_dssp TCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGC
T ss_pred ccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCcccc
Confidence 99999999999999865 68887778777776532 2223 12244444444
Q ss_pred -EEEccCCCCCCCccc-ccCCCCCCEEECCCCCCCCCcccch-hhhcCCCCCcEEeccCCCCcccCc-cccCCCCCC-EE
Q 001152 118 -CLQIKISSPGVNGFA-LNKLKGLKELELSKVPPRPSVLTLL-SEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLE-QL 192 (1137)
Q Consensus 118 -~L~Ls~N~~~~~~~~-~~~L~~L~~L~Ls~n~ln~~~~~lp-~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~-~L 192 (1137)
.+.+.++-....... ...+++|+.|+|++|.+ ..+| ..|.+|.+|+.|+|.+| ++.|+. .|.++++|+ .|
T Consensus 205 ~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i----~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 205 NFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNA----TTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp SEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCC----CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCc----ceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 333222210000001 11378999999998543 3444 46889999999999998 888887 789999999 99
Q ss_pred EccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEec
Q 001152 193 DLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDL 240 (1137)
Q Consensus 193 ~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdL 240 (1137)
+|.+ .++.|+ ..|.+|++|+.|+|++|.++.|+. .|.++++|+.|+.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 9998 888886 678999999999999999999976 5777999999874
No 396
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=2.1e-12 Score=147.27 Aligned_cols=111 Identities=23% Similarity=0.220 Sum_probs=98.6
Q ss_pred EEeccCC-CCcccCccccCCCCCCEEEccC-CCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeccCC
Q 001152 168 KLSVCHF-SIRYLPPEIGCLSNLEQLDLSF-NKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNN 243 (1137)
Q Consensus 168 ~L~Ls~N-~L~~IP~~l~~L~~L~~L~Ls~-N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdLS~N 243 (1137)
.++++++ +|+.||. |..+++|+.|+|++ |+|+.+| ..|+.|++|+.|+|++|+|+.+|+ .|.+|++|+.|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 5788888 9999999 99999999999996 9999887 578999999999999999997765 6788999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchh
Q 001152 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWIC 280 (1137)
Q Consensus 244 ~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1137)
+|+++++..|..++ |+.|+|++|+|.|.|.+.....
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~ 126 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQR 126 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHH
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHH
Confidence 99999987777776 9999999999999887654433
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.24 E-value=2.7e-11 Score=124.53 Aligned_cols=106 Identities=25% Similarity=0.291 Sum_probs=86.3
Q ss_pred CCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCccc-CccccCCCCCCEEEccCCCCCccchh-hcCCCCCCEEE
Q 001152 139 LKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLK 216 (1137)
Q Consensus 139 L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~LP~~-l~~L~~L~~L~ 216 (1137)
.+.|++++|.+. .+|..+ .++|+.|+|++|+|+.+ |..|..+++|++|+|++|+|+.+|.. |..+++|+.|+
T Consensus 11 ~~~l~~s~n~l~----~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 84 (170)
T 3g39_A 11 GTTVDCSGKSLA----SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLS 84 (170)
T ss_dssp TTEEECTTSCCS----SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEEEeCCCCcC----ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEE
Confidence 345666654432 344443 26789999999999987 55789999999999999999988865 58899999999
Q ss_pred ccCCCCCccCcc-ccCCCCCCEEeccCCcCCCCCc
Q 001152 217 VANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGS 250 (1137)
Q Consensus 217 Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~~p 250 (1137)
|++|+|+.+|.. +..+++|+.|+|++|.|+...+
T Consensus 85 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 85 LNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999999998875 7789999999999999997754
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.23 E-value=2.6e-11 Score=125.32 Aligned_cols=82 Identities=22% Similarity=0.295 Sum_probs=41.8
Q ss_pred CCccEEEeecCCCCcc-CccccCCCCCcEEEccCCCCCccccc-ccCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEEC
Q 001152 68 NSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELEL 144 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~~I-P~~~~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~~~~~~~-~~~~L~~L~~L~L 144 (1137)
++|++|+|++|+|+.+ |..|.++++|++|+|++|+|+.+|.. |.++++|++|+|++|.+..++. .|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 3455555555555544 23455555555555555555555443 3455555555555555444443 2555555555555
Q ss_pred CCCCC
Q 001152 145 SKVPP 149 (1137)
Q Consensus 145 s~n~l 149 (1137)
++|++
T Consensus 113 ~~N~~ 117 (174)
T 2r9u_A 113 YNNPW 117 (174)
T ss_dssp CSSCB
T ss_pred CCCCc
Confidence 55444
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=1.9e-12 Score=150.23 Aligned_cols=163 Identities=20% Similarity=0.185 Sum_probs=86.4
Q ss_pred CCcEEEccCCCCCcc-----ccccc-CCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCccc-chhhh-c
Q 001152 92 KLRNLKFFGNEINLF-----PSEVG-NLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLT-LLSEI-A 161 (1137)
Q Consensus 92 ~L~~L~Ls~N~L~~l-----P~~l~-~L~~L~~L~Ls~N~~~~~~--~~~~~L~~L~~L~Ls~n~ln~~~~~-lp~~l-~ 161 (1137)
.|+.|+|++|.|+.. ...+. +.++|+.|+|++|.++..+ .....+.+|+.|+|++|.+...... +...+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 455666666665522 11122 1245555555555543211 1122334455555555443221111 11112 2
Q ss_pred CCCCCcEEeccCCCCcc-----cCccccCCCCCCEEEccCCCCC-----ccchhhcCCCCCCEEEccCCCCCc-----cC
Q 001152 162 GLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLVE-----LP 226 (1137)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L~-----~LP~~l~~L~~L~~L~Ls~N~Ls~-----IP 226 (1137)
..++|+.|+|++|.|+. ++..+..+++|++|+|++|.|+ .|+..+..+++|+.|+|++|.|+. ++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 34567777777777653 3444556667777777777776 234556666677777777777762 33
Q ss_pred ccccCCCCCCEEeccCCcCCCCCccccc
Q 001152 227 SGLYLLQRLENLDLSNNRLTSLGSLDLC 254 (1137)
Q Consensus 227 ~~l~~L~~L~~LdLS~N~Lsg~~p~~l~ 254 (1137)
..+...++|+.|+|++|.|+......+.
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 4455566777777777777654444443
No 400
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.10 E-value=2.3e-10 Score=125.04 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=106.3
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeeEecCCC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 879 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpNIVkllg~~~~~~~ 879 (1137)
+..|++...++.|+.+.||++...+..+++|+........ . . .+.+|+.+++.+. |..+.++++++...+
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~-~---~----~~~~E~~~l~~l~~~~~vP~v~~~~~~~~- 83 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGT-T---Y----DVEREKDMMLWLEGKLPVPKVLHFERHDG- 83 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTS-T---T----CHHHHHHHHHHHTTTSCCCCEEEEEEETT-
T ss_pred hccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCC-H---H----HHHHHHHHHHHHhcCCCCCeEEEEEecCC-
Confidence 4568899999999999999999877889999854321111 1 1 2377999999986 677889998887654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------
Q 001152 880 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS----------------- 942 (1137)
Q Consensus 880 ~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs----------------- 942 (1137)
..|+||||++|.+|.+.+. +......++.+++.+|..||+
T Consensus 84 -------------~~~lv~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~ 140 (263)
T 3tm0_A 84 -------------WSNLLMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLA 140 (263)
T ss_dssp -------------EEEEEEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHH
T ss_pred -------------ceEEEEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHH
Confidence 5699999999999876521 112234778899999999998
Q ss_pred ------------------------------------------CCeeeccCCCCCeEeccccccCCCCCeEEEeecCcc
Q 001152 943 ------------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRA 978 (1137)
Q Consensus 943 ------------------------------------------~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla 978 (1137)
..++|||++|.|||++.+ ..+.|+||+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~-------~~~~lIDwe~a 211 (263)
T 3tm0_A 141 ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDG-------KVSGFIDLGRS 211 (263)
T ss_dssp HHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETT-------EEEEECCCTTC
T ss_pred HHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECC-------cEEEEEEchhc
Confidence 458999999999999754 45679999965
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.09 E-value=1.1e-11 Score=143.68 Aligned_cols=158 Identities=20% Similarity=0.242 Sum_probs=100.2
Q ss_pred CCccEEEeecCCCCccC-----cccc-CCCCCcEEEccCCCCCc--ccccccCCCCCCEEEccCCCCCCCcc-cc-----
Q 001152 68 NSVEGLYLYKNVLNLIP-----KSVG-RYEKLRNLKFFGNEINL--FPSEVGNLLGLECLQIKISSPGVNGF-AL----- 133 (1137)
Q Consensus 68 ~~L~~L~Ls~N~L~~IP-----~~~~-~L~~L~~L~Ls~N~L~~--lP~~l~~L~~L~~L~Ls~N~~~~~~~-~~----- 133 (1137)
+.|+.|+|++|.|+... ..+. ..++|+.|+|++|.|+. +..-...+++|+.|+|++|.++..+. .+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 34566666666665321 1122 12456666666666652 11112234456666666665543331 11
Q ss_pred cCCCCCCEEECCCCCCCCC-cccchhhhcCCCCCcEEeccCCCCcc-----cCccccCCCCCCEEEccCCCCCc-----c
Q 001152 134 NKLKGLKELELSKVPPRPS-VLTLLSEIAGLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKY-----L 202 (1137)
Q Consensus 134 ~~L~~L~~L~Ls~n~ln~~-~~~lp~~l~~L~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L~~-----L 202 (1137)
....+|++|+|++|.+... ...++..+..+++|++|+|++|.|+. |+..+...++|+.|+|++|.|+. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2356677777777554321 12355566788899999999999873 35567778899999999999983 4
Q ss_pred chhhcCCCCCCEEEccCCCCCcc
Q 001152 203 PTEICYLKALISLKVANNKLVEL 225 (1137)
Q Consensus 203 P~~l~~L~~L~~L~Ls~N~Ls~I 225 (1137)
+..+..+++|++|+|++|.|+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHH
Confidence 56677789999999999999843
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.08 E-value=1.2e-10 Score=132.67 Aligned_cols=127 Identities=19% Similarity=0.161 Sum_probs=94.3
Q ss_pred EEECCCCCCCCCcccchhhhcCCCCCcEEeccC-CCCcccCc-cccCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEc
Q 001152 141 ELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH-FSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKV 217 (1137)
Q Consensus 141 ~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~-N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~L 217 (1137)
.++++++ +.+..+|. |..+++|+.|+|++ |+|+.+|. .|+.|++|++|+|++|+|+.+| ..|.+|++|+.|+|
T Consensus 12 ~v~~~~~---n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 12 GLRCTRD---GALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp CEECCSS---CCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred EEEcCCC---CCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 3455552 13345777 88888999999996 99998875 7899999999999999999775 56799999999999
Q ss_pred cCCCCCccCccccCCCCCCEEeccCCcCCCCCc-ccccCCCCCCEEEccCCcCCC
Q 001152 218 ANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS-LDLCLMHNLQNLNLQYNKLLS 271 (1137)
Q Consensus 218 s~N~Ls~IP~~l~~L~~L~~LdLS~N~Lsg~~p-~~l~~L~~L~~L~Ls~N~L~~ 271 (1137)
++|+|+.+|..++....|+.|+|++|.|...-. .+|..+.......+..+.++|
T Consensus 88 ~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C 142 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQC 142 (347)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCC
T ss_pred CCCccceeCHHHcccCCceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCC
Confidence 999999998876664459999999999986432 123332222333344555665
No 403
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.97 E-value=9.5e-09 Score=119.49 Aligned_cols=244 Identities=12% Similarity=0.104 Sum_probs=122.2
Q ss_pred cccCCCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecC-----------
Q 001152 10 TQKSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKN----------- 78 (1137)
Q Consensus 10 ~~~~~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N----------- 78 (1137)
.++..+. .|+.+.+. ++|+.|...+|.++.+|+.++|..+ ++.+....|.+. .+|+.+.+..+
T Consensus 65 ~AF~~c~-~L~~i~lp-~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c---~~L~~i~~p~~l~~i~~~aF~~ 138 (394)
T 4fs7_A 65 AAFQGCR-KVTEIKIP-STVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGC---YALKSILLPLMLKSIGVEAFKG 138 (394)
T ss_dssp TTTTTCT-TEEEEECC-TTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTC---TTCCCCCCCTTCCEECTTTTTT
T ss_pred HHhhCCC-CceEEEeC-CCccCcchhHhhCCCCCcEEEeCCC-ceEccchhhccc---ccchhhcccCceeeecceeeec
Confidence 3455554 57777665 4588888888888888888888654 433333333222 33333322211
Q ss_pred ----------CCCccC-ccccCCCCCcEEEccCCCCCcccc-cccCCCCCCEEEccCCC---------------------
Q 001152 79 ----------VLNLIP-KSVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISS--------------------- 125 (1137)
Q Consensus 79 ----------~L~~IP-~~~~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~--------------------- 125 (1137)
.+..+. ..|.++++|+.+.|.++ +..|+. .|.++.+|+.+.+..|-
T Consensus 139 ~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 139 CDFKEITIPEGVTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp CCCSEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCTTCCBCCCCT
T ss_pred ccccccccCccccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCCceEeCchhhccccccceeecCC
Confidence 011111 12444455555555432 223322 23444444444443221
Q ss_pred -CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcc--------------------cCc-cc
Q 001152 126 -PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY--------------------LPP-EI 183 (1137)
Q Consensus 126 -~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~--------------------IP~-~l 183 (1137)
...++..+....+|+.+.+... ....-...+.++..|+.+.+..+...- +|. .|
T Consensus 218 ~~~~i~~~~~~~~~l~~i~ip~~----~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F 293 (394)
T 4fs7_A 218 SLYYLGDFALSKTGVKNIIIPDS----FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTF 293 (394)
T ss_dssp TCCEECTTTTTTCCCCEEEECTT----CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTT
T ss_pred CceEeehhhcccCCCceEEECCC----ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccc
Confidence 1111222233345666655431 111111234455566666555443221 222 34
Q ss_pred cCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeccCCcCCCCCcccccCCCCCCE
Q 001152 184 GCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQN 261 (1137)
Q Consensus 184 ~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~ 261 (1137)
..+.+|+.+.+..| ++.|+ .+|.++.+|+.++|..+ ++.|+. .|.++.+|+.++|..| ++.+...+|.++.+|+.
T Consensus 294 ~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 370 (394)
T 4fs7_A 294 YGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKK 370 (394)
T ss_dssp TTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCE
T ss_pred cccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCE
Confidence 55566666666543 55554 34566677777777533 666643 3555677777777655 66666666777777777
Q ss_pred EEccCC
Q 001152 262 LNLQYN 267 (1137)
Q Consensus 262 L~Ls~N 267 (1137)
++|..|
T Consensus 371 i~lp~~ 376 (394)
T 4fs7_A 371 VELPKR 376 (394)
T ss_dssp EEEEGG
T ss_pred EEECCC
Confidence 766544
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.95 E-value=2.4e-08 Score=116.14 Aligned_cols=249 Identities=8% Similarity=0.095 Sum_probs=153.9
Q ss_pred cccCCCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCC---CCCCCcccccCCCCCCCccEEEeecCCCCccCc-
Q 001152 10 TQKSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT---VDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK- 85 (1137)
Q Consensus 10 ~~~~~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~---L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~- 85 (1137)
.++.+....++.+.+- +.++.|...+|.++.+|+.+.++.|. ++.+-..+|. ++.+|+.+.+.++ ++.|+.
T Consensus 57 ~aF~~~~~~L~sI~iP-~svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~---~c~~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIP-DTVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFM---FCSELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp TTTTTCCSCCCEEEEC-TTCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTT---TCTTCCBCGGGTT-CSEECTT
T ss_pred hhccCCCCcCEEEEEC-CCeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhch---hcccceeeccCCc-cceehhh
Confidence 3455543346666554 35899999999999999999998774 4444444443 3366666666554 666653
Q ss_pred cccCCCCCcEEEccCCCCCcccc-cccCCCCCCEEEccCC----------------------CCCCCcccccCCCCCCEE
Q 001152 86 SVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKIS----------------------SPGVNGFALNKLKGLKEL 142 (1137)
Q Consensus 86 ~~~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N----------------------~~~~~~~~~~~L~~L~~L 142 (1137)
.|..+.+|+.+.|.. .+..|+. .|.++.+|+.+.+..+ ........|..+.+|...
T Consensus 132 aF~~c~~L~~i~lp~-~~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 132 AFHHCEELDTVTIPE-GVTSVADGMFSYCYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTI 210 (394)
T ss_dssp TTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEE
T ss_pred hhhhhcccccccccc-eeeeecccceecccccccccccceeeEeccccccccceeEEEECCcccccccchhhhcccccee
Confidence 466666677776653 2333332 2444555555555432 221222233444444443
Q ss_pred ECCCCCCC-------------------------CCcccch--------hhhcCCCCCcEEeccCCCCcccCc-cccCCCC
Q 001152 143 ELSKVPPR-------------------------PSVLTLL--------SEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSN 188 (1137)
Q Consensus 143 ~Ls~n~ln-------------------------~~~~~lp--------~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~ 188 (1137)
....+... ...-.+| .+|.++..|+.+.+..+-. .|.. .|.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~ 289 (394)
T 4gt6_A 211 TSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPA 289 (394)
T ss_dssp EECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTT
T ss_pred cccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc-eecCcccccccc
Confidence 32221100 0001122 2456677788887765543 3444 6778888
Q ss_pred CCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccC
Q 001152 189 LEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQY 266 (1137)
Q Consensus 189 L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~ 266 (1137)
|+.+.+. +.++.|+ ..|.++.+|+.+.|..| ++.|.. .|.++.+|+.+.|..+ ++.+...+|.++.+|+.+++.+
T Consensus 290 L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 290 LQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESS
T ss_pred cccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECC
Confidence 8888885 5677776 45677889999998754 777865 4667889999998654 7888788888999999999888
Q ss_pred Cc
Q 001152 267 NK 268 (1137)
Q Consensus 267 N~ 268 (1137)
|.
T Consensus 367 ~~ 368 (394)
T 4gt6_A 367 SR 368 (394)
T ss_dssp CH
T ss_pred ce
Confidence 75
No 405
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.83 E-value=5.4e-09 Score=113.00 Aligned_cols=134 Identities=14% Similarity=0.123 Sum_probs=92.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCc--ceeeeeEecC
Q 001152 801 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI--VEMYGHKISS 877 (1137)
Q Consensus 801 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNI--Vkllg~~~~~ 877 (1137)
+..|.+....+.|..+.||++... +..+++|+.... ... .+.+|+.+++.+.+.++ .+++++....
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~----~~~~E~~~l~~l~~~~~~vP~~~~~~~~~ 87 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALN----ELQDEAARLSWLATTGVPCAAVLDVVTEA 87 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTS----CHHHHHHHHHHHHTTTCCBCCEEEEEECS
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cch----hhhHHHHHHHHHHhCCCCCCeEEEeccCC
Confidence 455666555556677999999864 466999985321 111 23678999998865454 4688877654
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH------------- 944 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~g------------- 944 (1137)
+ ..++||||++|.+|. .. ..+ ...++.+++..|..||+..
T Consensus 88 ~--------------~~~~v~e~i~G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~ 140 (264)
T 1nd4_A 88 G--------------RDWLLLGEVPGQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHR 140 (264)
T ss_dssp S--------------CEEEEEECCSSEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHH
T ss_pred C--------------CCEEEEEecCCcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHH
Confidence 3 469999999988884 11 011 1245667777777777543
Q ss_pred ---------------------------------------------eeeccCCCCCeEeccccccCCCCCeEEEeecCccc
Q 001152 945 ---------------------------------------------IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 979 (1137)
Q Consensus 945 ---------------------------------------------IIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~ 979 (1137)
++|||++|.|||++.+ ..+.|+|||.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~-------~~~~liD~~~a~ 213 (264)
T 1nd4_A 141 IERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENG-------RFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETT-------EEEEECCCTTCE
T ss_pred HHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECC-------cEEEEEcchhcc
Confidence 9999999999999765 456799999763
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.81 E-value=9.4e-08 Score=110.13 Aligned_cols=239 Identities=12% Similarity=0.059 Sum_probs=133.1
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCCCCcEEE
Q 001152 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1137)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~~~~L~~L~~L~ 97 (1137)
+++.+-+. ..|+.|...+|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..| ++.|+.......+|+.+.
T Consensus 47 ~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c----~l~~i~~~~~-l~~I~~~aF~~~~L~~i~ 119 (379)
T 4h09_A 47 RISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT----KLQSYTGMER-VKKFGDYVFQGTDLDDFE 119 (379)
T ss_dssp GCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC----CCCEEEECTT-CCEECTTTTTTCCCSEEE
T ss_pred CCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC----CCceEECCce-eeEeccceeccCCccccc
Confidence 34444443 4588999999999999999999754 776666666543 6888888765 888876433335799998
Q ss_pred ccCCCCCcccccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCC---------------------------
Q 001152 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPR--------------------------- 150 (1137)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln--------------------------- 150 (1137)
|..+ ++.+......-.+|+.+.+..+-.......|....+|+.+.+..+...
T Consensus 120 lp~~-~~~i~~~~F~~~~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
T 4h09_A 120 FPGA-TTEIGNYIFYNSSVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTE 198 (379)
T ss_dssp CCTT-CCEECTTTTTTCCCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSE
T ss_pred CCCc-cccccccccccceeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccccccccc
Confidence 8654 444433322233455544433322222234444555554444321110
Q ss_pred -----CCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCC
Q 001152 151 -----PSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLV 223 (1137)
Q Consensus 151 -----~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls 223 (1137)
.........+..+.+|+.+.+..+ +..|+. .+..+..|+.+.+..+ ++.|. ..|.++.+|+.+.+..+ ++
T Consensus 199 ~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~ 275 (379)
T 4h09_A 199 FTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK 275 (379)
T ss_dssp EECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS
T ss_pred cccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce
Confidence 000001122334455555555433 333333 4555666666666554 55553 34455666666666433 55
Q ss_pred ccCcc-ccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCC
Q 001152 224 ELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1137)
Q Consensus 224 ~IP~~-l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N 267 (1137)
.|+.. |.++.+|+.+.|.+|.++.+....|.++.+|+.+.|..|
T Consensus 276 ~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 276 TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 55543 444666666666666666666666666666666666543
No 407
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.80 E-value=6.3e-09 Score=119.26 Aligned_cols=147 Identities=15% Similarity=0.181 Sum_probs=103.7
Q ss_pred EeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC--CCCcceeeeeEecCCCCCCC
Q 001152 806 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSKWLPSA 883 (1137)
Q Consensus 806 l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~--HpNIVkllg~~~~~~~~~~~ 883 (1137)
-.+.|+.|.++.||++...+..+++|+....... ...... .+.+|+.+++.+. +..+.++++++.+....
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~-~~~~~~----~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~--- 113 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSK-LLPSAH----AIEREYRVMDALAGTDVPVAKMYALCEDESVI--- 113 (359)
T ss_dssp EEEECCC-CCSCEEEEECSSCEEEEECCCC---------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTT---
T ss_pred eEEEcCCcccceEEEEEECCceEEEEeCCCCCCC-CCCcHH----HHHHHHHHHHHhhcCCCCCCcEEEECCCCCcc---
Confidence 4578999999999999987777888763200110 011111 2377999999997 45577888887654311
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---------------------
Q 001152 884 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS--------------------- 942 (1137)
Q Consensus 884 ~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs--------------------- 942 (1137)
...++||||++|..+.+.. ...++......++.++++.|..||+
T Consensus 114 --------g~~~~vme~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3dxp_A 114 --------GRAFYIMEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQ 178 (359)
T ss_dssp --------SSCEEEEECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHH
T ss_pred --------CCeEEEEEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHH
Confidence 1358999999988774311 1246788888999999999999997
Q ss_pred -------------------------------------CCeeeccCCCCCeEeccccccCCCCCeEEEeecCcccc
Q 001152 943 -------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 980 (1137)
Q Consensus 943 -------------------------------------~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~ 980 (1137)
..++|||+++.|||++.+.. ..+.|+||+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~-----~v~~viDwe~a~~ 248 (359)
T 3dxp_A 179 IERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEP-----RVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSS-----CEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCC-----cEEEEECcccccc
Confidence 35899999999999986621 2468999998864
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.79 E-value=2.8e-09 Score=123.07 Aligned_cols=151 Identities=17% Similarity=0.188 Sum_probs=77.5
Q ss_pred ccCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhc--CCCCCcEEeccC--CC------Ccc
Q 001152 110 VGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIA--GLKCLTKLSVCH--FS------IRY 178 (1137)
Q Consensus 110 l~~L~~L~~L~Ls~N~-~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~--~L~~L~~L~Ls~--N~------L~~ 178 (1137)
+..+++|+.|.|++|. +.. +. + .+.+|+.|+|..+.++ ......+. .+++|+.|+|+. |. +..
T Consensus 168 l~~~P~L~~L~L~g~~~l~l-~~-~-~~~~L~~L~L~~~~l~---~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNLSI-GK-K-PRPNLKSLEIISGGLP---DSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHTCTTCCEEEEECCBTCBC-CS-C-BCTTCSEEEEECSBCC---HHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HhcCCCCcEEEEeCCCCcee-cc-c-cCCCCcEEEEecCCCC---hHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 4445555555555442 211 11 1 2555666666543221 11122222 456666666542 11 111
Q ss_pred cCccc--cCCCCCCEEEccCCCCC-ccchhhc---CCCCCCEEEccCCCCCc-----cCccccCCCCCCEEeccCCcCCC
Q 001152 179 LPPEI--GCLSNLEQLDLSFNKMK-YLPTEIC---YLKALISLKVANNKLVE-----LPSGLYLLQRLENLDLSNNRLTS 247 (1137)
Q Consensus 179 IP~~l--~~L~~L~~L~Ls~N~L~-~LP~~l~---~L~~L~~L~Ls~N~Ls~-----IP~~l~~L~~L~~LdLS~N~Lsg 247 (1137)
+...+ ..+++|++|+|++|.+. ..+..+. .+++|+.|+|+.|.|+. |+..+..+++|+.|+|++|.|+.
T Consensus 242 l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 242 FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 11112 24677777777777776 2232332 36677777777777763 44445556777777777777764
Q ss_pred CCcccccC-CCCCCEEEccCCc
Q 001152 248 LGSLDLCL-MHNLQNLNLQYNK 268 (1137)
Q Consensus 248 ~~p~~l~~-L~~L~~L~Ls~N~ 268 (1137)
..-..+.. + ...+++++|+
T Consensus 322 ~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 322 EMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHHc--CCEEEecCCc
Confidence 32222322 2 3456777665
No 409
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.79 E-value=3.3e-08 Score=114.92 Aligned_cols=221 Identities=14% Similarity=0.181 Sum_probs=151.6
Q ss_pred CCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCCCCcEEEccCCCC-
Q 001152 26 ANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEI- 103 (1137)
Q Consensus 26 ~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~-~~~~L~~L~~L~Ls~N~L- 103 (1137)
.+.+..+...+|.++.+|+.++|..+. ..+....| .++.+|+.+.|..| ++.|+. .|.++..|+.+.+.++..
T Consensus 147 ~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F---~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~ 221 (394)
T 4fs7_A 147 PEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLF---SGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY 221 (394)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTT---TTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE
T ss_pred CccccccchhhhcccCCCcEEecCCcc-ceeccccc---cCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE
Confidence 345566778889999999999997653 33444444 44578888888877 777754 577777777777655432
Q ss_pred --------------------Cccc-ccccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcC
Q 001152 104 --------------------NLFP-SEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAG 162 (1137)
Q Consensus 104 --------------------~~lP-~~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~ 162 (1137)
+.|. ..+.++..|+.+.+..+........|..+..|+.+.+..+. + ....+..
T Consensus 222 i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~----i--~~~~F~~ 295 (394)
T 4fs7_A 222 LGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVI----V--PEKTFYG 295 (394)
T ss_dssp ECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSE----E--CTTTTTT
T ss_pred eehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCcee----e--ccccccc
Confidence 1111 12344555555555554444444455555666655554311 1 1134678
Q ss_pred CCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEe
Q 001152 163 LKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLD 239 (1137)
Q Consensus 163 L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~Ld 239 (1137)
+.+|+.+.+..+ ++.|+. .|.++++|+.++|.. .++.|+ .+|.+|.+|+.+.|..| ++.|+. .|.++.+|+.++
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~-~v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPY-LVEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVE 372 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEE
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCC-cccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEE
Confidence 889999998765 777866 788999999999975 488885 57889999999999877 888865 477899999999
Q ss_pred ccCCcCCCCCcccccCCCCCCEE
Q 001152 240 LSNNRLTSLGSLDLCLMHNLQNL 262 (1137)
Q Consensus 240 LS~N~Lsg~~p~~l~~L~~L~~L 262 (1137)
|..| ++.. ...|.++++|+.+
T Consensus 373 lp~~-~~~~-~~~F~~c~~L~~I 393 (394)
T 4fs7_A 373 LPKR-LEQY-RYDFEDTTKFKWI 393 (394)
T ss_dssp EEGG-GGGG-GGGBCTTCEEEEE
T ss_pred ECCC-CEEh-hheecCCCCCcEE
Confidence 9866 4433 3578888888765
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.78 E-value=1.1e-07 Score=110.46 Aligned_cols=232 Identities=10% Similarity=0.113 Sum_probs=149.9
Q ss_pred CCcccCCCCCCCCC-CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC---CCccCc-cccCCCCCcEEEccCCC
Q 001152 28 KINNEKNGSVNDDD-DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV---LNLIPK-SVGRYEKLRNLKFFGNE 102 (1137)
Q Consensus 28 ~i~~l~~~~f~~l~-~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~---L~~IP~-~~~~L~~L~~L~Ls~N~ 102 (1137)
.++.|...+|.+.. .|+.+.|-.+ ++.+-..+|. ++++|+.+.+..|. ++.|+. .|.++.+|+.+.+..+
T Consensus 50 ~Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~---~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~- 124 (394)
T 4gt6_A 50 PVSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFY---NCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS- 124 (394)
T ss_dssp EEEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTT---TCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-
T ss_pred eeeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhh---CCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-
Confidence 47899999999985 6999999754 7766666664 45999999998874 778864 6888999999888754
Q ss_pred CCcccc-cccCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCC---------CCC-cccch--------hhhcCC
Q 001152 103 INLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPP---------RPS-VLTLL--------SEIAGL 163 (1137)
Q Consensus 103 L~~lP~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~L~~L~~L~Ls~n~l---------n~~-~~~lp--------~~l~~L 163 (1137)
++.|+. .|.++.+|+.+.+..+........|..+.+|+.+.+..+-. +.+ .-.+| ..+..+
T Consensus 125 ~~~I~~~aF~~c~~L~~i~lp~~~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c 204 (394)
T 4gt6_A 125 VTEIDSEAFHHCEELDTVTIPEGVTSVADGMFSYCYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSEC 204 (394)
T ss_dssp CSEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTC
T ss_pred cceehhhhhhhhcccccccccceeeeecccceecccccccccccceeeEeccccccccceeEEEECCcccccccchhhhc
Confidence 777755 47889999999997655444556788888898888865210 000 00111 123334
Q ss_pred CCCcEEeccCCCCc-----------------------------ccCc--------cccCCCCCCEEEccCCCCCccc-hh
Q 001152 164 KCLTKLSVCHFSIR-----------------------------YLPP--------EIGCLSNLEQLDLSFNKMKYLP-TE 205 (1137)
Q Consensus 164 ~~L~~L~Ls~N~L~-----------------------------~IP~--------~l~~L~~L~~L~Ls~N~L~~LP-~~ 205 (1137)
..|.......+... .+|. .|..+.+|+.+.+..+. ..|. ..
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~a 283 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSV-VSIGTGA 283 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTC-CEECTTT
T ss_pred cccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEeccccc-ceecCcc
Confidence 44443332221111 1222 34455666666665433 2332 45
Q ss_pred hcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCC
Q 001152 206 ICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1137)
Q Consensus 206 l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N 267 (1137)
|.++.+|+.+.+. +.++.|+.. |.++.+|+.++|..| ++.+...+|.++.+|+.+.|..|
T Consensus 284 F~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp TTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred cccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 5667777777774 456667654 445777777777654 66666667777777777777544
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.68 E-value=2.7e-08 Score=111.36 Aligned_cols=196 Identities=18% Similarity=0.207 Sum_probs=117.5
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCc--ceeeeeEecCCCCCCCC
Q 001152 808 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCI--VEMYGHKISSKWLPSAD 884 (1137)
Q Consensus 808 ~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpNI--Vkllg~~~~~~~~~~~~ 884 (1137)
+.++.|.+..||++. ..+++|+... ..... ++.+|+++|+.+. +..| .+++........
T Consensus 26 ~~~~~G~~n~v~~v~---~~~vlR~~~~------~~~~~----~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~----- 87 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN---RDFIFKFPKH------SRGST----NLFNEVNILKRIHNKLPLPIPEVVFTGMPSET----- 87 (304)
T ss_dssp CEEEECSSEEEEEST---TSEEEEEESS------HHHHH----HHHHHHHHHHHHTTSSSSCCCCEEEECCCCSS-----
T ss_pred EecCCCCcceEEEEC---CEEEEEecCC------cchHH----HHHHHHHHHHHHHhcCCCCCCceEeecCCCCC-----
Confidence 458999999999764 5688887421 11222 3478999998884 4333 344444322221
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh----------------------
Q 001152 885 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---------------------- 942 (1137)
Q Consensus 885 g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs---------------------- 942 (1137)
....|+|||+++|.+|...... .++..++..++.|++..|..||+
T Consensus 88 ------~~~~~~vm~~i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~ 154 (304)
T 3sg8_A 88 ------YQMSFAGFTKIKGVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDN 154 (304)
T ss_dssp ------CSCSCEEEECCCCEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHH
T ss_pred ------CCcceEEEcccCCeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHH
Confidence 1134899999999888754332 36777788888888888888885
Q ss_pred ------------------------------------CCeeeccCCCCCeEeccccccCCCCCeEEEeecCcccccccccc
Q 001152 943 ------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLH 986 (1137)
Q Consensus 943 ------------------------------------~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~~~~~ 986 (1137)
..++|||++|.||+++.+. ...+.|+||+.+........
T Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~-----~~~~~~iD~~~~~~~~~~~D 229 (304)
T 3sg8_A 155 KKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK-----NTICGIIDFGDAAISDPDND 229 (304)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT-----TEEEEECCCTTCEEECTTHH
T ss_pred HHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC-----CCEEEEEeCCCCccCChHHH
Confidence 1379999999999998731 14678999998764322110
Q ss_pred ccccccCCC-CCC---CcccCCCcccc-hhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001152 987 TCCIAHRGI-PAP---DVCVGTPRWMA-PEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPY 1045 (1137)
Q Consensus 987 ~~~~~~~~~-~~~---~~~~GT~~Y~A-PE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG~~Pf 1045 (1137)
......... ... ..+.....+.. |+.... .....+.|++|.++|.+.+|..+|
T Consensus 230 l~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r------~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 230 FISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEK------YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHH------HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHH------HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 000000000 000 00000001111 222221 113468999999999999998776
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.57 E-value=3.6e-08 Score=113.75 Aligned_cols=81 Identities=20% Similarity=0.229 Sum_probs=58.5
Q ss_pred CCCCCcEEeccCCCCc-ccCccc---cCCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEccCCCCCc-cCccccC
Q 001152 162 GLKCLTKLSVCHFSIR-YLPPEI---GCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKVANNKLVE-LPSGLYL 231 (1137)
Q Consensus 162 ~L~~L~~L~Ls~N~L~-~IP~~l---~~L~~L~~L~Ls~N~L~~-----LP~~l~~L~~L~~L~Ls~N~Ls~-IP~~l~~ 231 (1137)
.+++|+.|+|.+|.++ ..+..+ ..+++|++|+|+.|.|+. ++..+..+++|+.|+|++|.|+. .=..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 4678899999888876 232222 357899999999999983 55556678899999999998872 2222332
Q ss_pred -CCCCCEEeccCCc
Q 001152 232 -LQRLENLDLSNNR 244 (1137)
Q Consensus 232 -L~~L~~LdLS~N~ 244 (1137)
+ ...++++.|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 4678999988
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.44 E-value=4.4e-06 Score=96.09 Aligned_cols=242 Identities=11% Similarity=0.082 Sum_probs=160.4
Q ss_pred hhcccCCCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-
Q 001152 8 EITQKSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS- 86 (1137)
Q Consensus 8 ~~~~~~~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~L~~IP~~- 86 (1137)
.-.++..+. .|+.+.+. +.++.|...+|.+. +|+.+.+..+ ++.+...+|.. .+|+.+.|..+ ++.+...
T Consensus 61 g~~aF~~C~-~L~~I~lp-~~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~----~~L~~i~lp~~-~~~i~~~~ 131 (379)
T 4h09_A 61 GEANFNSCY-NMTKVTVA-STVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG----TDLDDFEFPGA-TTEIGNYI 131 (379)
T ss_dssp CTTTTTTCT-TCCEEEEC-TTCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT----CCCSEEECCTT-CCEECTTT
T ss_pred HHHHhhCCC-CCCEEEeC-CcceEechhhhcCC-CCceEECCce-eeEeccceecc----CCcccccCCCc-cccccccc
Confidence 334555654 67777775 45888989999887 6777777644 55444444432 36788887655 4444432
Q ss_pred ccCCCCCcEEEccCCCCCccc-ccccCCCCCCE------------------------------------EEccCCCCCCC
Q 001152 87 VGRYEKLRNLKFFGNEINLFP-SEVGNLLGLEC------------------------------------LQIKISSPGVN 129 (1137)
Q Consensus 87 ~~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~------------------------------------L~Ls~N~~~~~ 129 (1137)
|.+ .+|+.+.+..+ ++.+. ..+.++.+|+. +.+..+.....
T Consensus 132 F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 209 (379)
T 4h09_A 132 FYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVT 209 (379)
T ss_dssp TTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEEC
T ss_pred ccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEe
Confidence 322 23444444322 22221 12333334433 33332222223
Q ss_pred cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEeccCCCCcccCc-cccCCCCCCEEEccCCCCCccch-hhc
Q 001152 130 GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPT-EIC 207 (1137)
Q Consensus 130 ~~~~~~L~~L~~L~Ls~n~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~LP~-~l~ 207 (1137)
...+....+|+.+.+.. +....-...+.++..|+.+.+..+ ++.|.. .|.++.+|+.+.+.. .++.++. .|.
T Consensus 210 ~~~f~~~~~l~~i~~~~----~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~ 283 (379)
T 4h09_A 210 AYGFSYGKNLKKITITS----GVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCS 283 (379)
T ss_dssp TTTTTTCSSCSEEECCT----TCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTT
T ss_pred ecccccccccceeeecc----ceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceeccccccc
Confidence 34566677888888765 222222345778899999999776 677765 678899999999975 5777764 578
Q ss_pred CCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCC
Q 001152 208 YLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1137)
Q Consensus 208 ~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N 267 (1137)
++.+|+.+.|.+|.++.|+.. |.++.+|+.+.|..| ++.+...+|.++.+|+.+.|..|
T Consensus 284 ~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 284 GCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 899999999999999999754 667999999999765 88888888999999999998665
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=1.3e-07 Score=98.36 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=85.0
Q ss_pred chhhhcCCCCCcEEeccCC-CCcc-----cCccccCCCCCCEEEccCCCCC-----ccchhhcCCCCCCEEEccCCCCCc
Q 001152 156 LLSEIAGLKCLTKLSVCHF-SIRY-----LPPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLVE 224 (1137)
Q Consensus 156 lp~~l~~L~~L~~L~Ls~N-~L~~-----IP~~l~~L~~L~~L~Ls~N~L~-----~LP~~l~~L~~L~~L~Ls~N~Ls~ 224 (1137)
+...+...+.|+.|+|++| .|+. +...+...++|++|+|++|.|. .|...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3345566788888888888 7762 3445666788899999999887 345566667889999999998873
Q ss_pred -----cCccccCCCCCCEEec--cCCcCCCCC----cccccCCCCCCEEEccCCcCC
Q 001152 225 -----LPSGLYLLQRLENLDL--SNNRLTSLG----SLDLCLMHNLQNLNLQYNKLL 270 (1137)
Q Consensus 225 -----IP~~l~~L~~L~~LdL--S~N~Lsg~~----p~~l~~L~~L~~L~Ls~N~L~ 270 (1137)
|...+...++|+.|+| ++|.|+... ...+...++|+.|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 5666777788999999 788888532 223455688999999998864
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.34 E-value=9.8e-08 Score=105.38 Aligned_cols=94 Identities=21% Similarity=0.182 Sum_probs=53.4
Q ss_pred EeccCCCCcccCccc----cCCCCCCEEEccCCCCCcc---chhhcCCCCCCEEEccCCCCCccCccccCCC--CCCEEe
Q 001152 169 LSVCHFSIRYLPPEI----GCLSNLEQLDLSFNKMKYL---PTEICYLKALISLKVANNKLVELPSGLYLLQ--RLENLD 239 (1137)
Q Consensus 169 L~Ls~N~L~~IP~~l----~~L~~L~~L~Ls~N~L~~L---P~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~--~L~~Ld 239 (1137)
++++.|+...++..+ .++++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+.+ ..+..+. +|+.|+
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~ 226 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELW 226 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEE
Confidence 455556544433311 3566677777777776643 34455666777777777776655 2233333 667777
Q ss_pred ccCCcCCCCCc-------ccccCCCCCCEEE
Q 001152 240 LSNNRLTSLGS-------LDLCLMHNLQNLN 263 (1137)
Q Consensus 240 LS~N~Lsg~~p-------~~l~~L~~L~~L~ 263 (1137)
|++|.|++..| ..+..+++|+.||
T Consensus 227 L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 227 LDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 77777665433 1245566666654
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.30 E-value=4.3e-06 Score=94.30 Aligned_cols=130 Identities=21% Similarity=0.198 Sum_probs=92.4
Q ss_pred EeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC--C--CcceeeeeEecCCCCC
Q 001152 806 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--S--CIVEMYGHKISSKWLP 881 (1137)
Q Consensus 806 l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~H--p--NIVkllg~~~~~~~~~ 881 (1137)
-.+.++.|....||++ +..+++|+... ...... +.+|+++|+.+.+ . .+.+++++ +
T Consensus 41 ~v~~l~~G~~n~vy~v---g~~~vlR~~~~------~~~~~~----~~~E~~~L~~L~~~~~~~~vP~v~~~----~--- 100 (320)
T 3r70_A 41 ELRYLSSGDDSDTFLC---NEQYVVKVPKR------DSVRIS----QKRELELYRFLENCKLSYQIPAVVYQ----S--- 100 (320)
T ss_dssp CEEEEEECSSEEEEEE---TTTEEEEEESS------HHHHHH----HHHHHHHHHHHTTSCCSSBCCCEEEE----C---
T ss_pred EEEeCCCCCCceEEEE---CCEEEEEeCCc------HHHHHH----HHHHHHHHHHHHhcCCCCCcceEEec----C---
Confidence 4577899999999988 67788886421 111222 3789999988875 2 23355544 1
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC------------------
Q 001152 882 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK------------------ 943 (1137)
Q Consensus 882 ~~~g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~------------------ 943 (1137)
..++||||++|.++..... ..++..+...++.+++..|..||+.
T Consensus 101 -----------~~~lvme~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~ 162 (320)
T 3r70_A 101 -----------DRFNIMKYIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKD 162 (320)
T ss_dssp -----------SSCEEEECCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHH
T ss_pred -----------CcEEEEeecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchH
Confidence 2389999999988864332 1356667777778888888877742
Q ss_pred ---------------------------------------------CeeeccCCCCCeEeccccccCCCCCeEEEeecCcc
Q 001152 944 ---------------------------------------------HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRA 978 (1137)
Q Consensus 944 ---------------------------------------------gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla 978 (1137)
.++|+|++|.|||++.+ ..+.|+||+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~-------~~~~~iD~~~~ 235 (320)
T 3r70_A 163 KFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNN-------RLFGVIDFGDF 235 (320)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETT-------EEEEECCCTTC
T ss_pred HHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECC-------ceEEEECCccc
Confidence 24899999999999875 45789999988
Q ss_pred cc
Q 001152 979 VP 980 (1137)
Q Consensus 979 ~~ 980 (1137)
..
T Consensus 236 ~~ 237 (320)
T 3r70_A 236 NV 237 (320)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.18 E-value=6.6e-07 Score=93.10 Aligned_cols=112 Identities=14% Similarity=0.116 Sum_probs=70.7
Q ss_pred CCCCCCEEECCCC-CCCCC-cccchhhhcCCCCCcEEeccCCCCcc-----cCccccCCCCCCEEEccCCCCCc-----c
Q 001152 135 KLKGLKELELSKV-PPRPS-VLTLLSEIAGLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKY-----L 202 (1137)
Q Consensus 135 ~L~~L~~L~Ls~n-~ln~~-~~~lp~~l~~L~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L~~-----L 202 (1137)
..+.|++|+|++| .+... ...+...+...++|++|+|++|.|+. |...+...++|++|+|++|.|+. |
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 3444455555543 33211 11233445566777777777777762 33344555678888888888872 5
Q ss_pred chhhcCCCCCCEEEc--cCCCCCc-----cCccccCCCCCCEEeccCCcCC
Q 001152 203 PTEICYLKALISLKV--ANNKLVE-----LPSGLYLLQRLENLDLSNNRLT 246 (1137)
Q Consensus 203 P~~l~~L~~L~~L~L--s~N~Ls~-----IP~~l~~L~~L~~LdLS~N~Ls 246 (1137)
...+...++|+.|+| ++|.|+. |...+...++|+.|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 566777778888888 7788872 4445556678888888888765
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.16 E-value=3.4e-07 Score=101.07 Aligned_cols=78 Identities=24% Similarity=0.210 Sum_probs=63.5
Q ss_pred cCCCCCcEEeccCCCCcccC---ccccCCCCCCEEEccCCCCCccchhhcCCC--CCCEEEccCCCCC-ccCc-------
Q 001152 161 AGLKCLTKLSVCHFSIRYLP---PEIGCLSNLEQLDLSFNKMKYLPTEICYLK--ALISLKVANNKLV-ELPS------- 227 (1137)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~IP---~~l~~L~~L~~L~Ls~N~L~~LP~~l~~L~--~L~~L~Ls~N~Ls-~IP~------- 227 (1137)
.++++|+.|+|++|+|+.|+ ..+..+++|+.|+|++|+|+.+. .+..+. +|+.|+|++|.|. .+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~-~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSER-ELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGG-GGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCch-hhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 56889999999999998654 56678999999999999999773 454444 9999999999998 5663
Q ss_pred cccCCCCCCEEe
Q 001152 228 GLYLLQRLENLD 239 (1137)
Q Consensus 228 ~l~~L~~L~~Ld 239 (1137)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 256789999886
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.04 E-value=4.7e-05 Score=85.35 Aligned_cols=137 Identities=16% Similarity=0.149 Sum_probs=86.8
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCC---CcceeeeeEecCCCCCCCC
Q 001152 808 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS---CIVEMYGHKISSKWLPSAD 884 (1137)
Q Consensus 808 ~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~Hp---NIVkllg~~~~~~~~~~~~ 884 (1137)
+.++.|....||+. +..+++|+.. ...... ++.+|+++|+.+.+. .+.+++.+.....
T Consensus 25 ~~l~~G~~n~v~~v---g~~~VlR~~~------~~~~~~----~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~------ 85 (306)
T 3tdw_A 25 ESLGEGFRNYAILV---NGDWVFRFPK------SQQGAD----ELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD------ 85 (306)
T ss_dssp EEEEECSSEEEEEE---TTTEEEEEES------SHHHHH----HHHHHHHHHHHHTTTCSSBCCCEEEEEECTT------
T ss_pred eecCCCcceeEEEE---CCEEEEEecC------CchHHH----HHHHHHHHHHHHHhcCCCCCCCeEeecccCC------
Confidence 56789999999988 6778888731 112222 347899999999742 2446666654211
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh----------------------
Q 001152 885 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---------------------- 942 (1137)
Q Consensus 885 g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs---------------------- 942 (1137)
...++||||++|.+|....-. .++......++.++++.|..||+
T Consensus 86 -------g~~~~v~e~i~G~~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~ 151 (306)
T 3tdw_A 86 -------GNPFVGYRKVQGQILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILL 151 (306)
T ss_dssp -------SCEEEEEECCCSEECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHH
T ss_pred -------CceEEEEeccCCeECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHH
Confidence 135899999998887663211 13344444444444444444443
Q ss_pred --------------------------------------CCeeeccCCCCCeEeccccccCCCCCeEEEeecCcccc
Q 001152 943 --------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 980 (1137)
Q Consensus 943 --------------------------------------~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~ 980 (1137)
..++|||++|.||+++.+. .....+.|+||+.+..
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~---~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 152 LSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNS---RQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTC---SSCCEEEECCCTTCEE
T ss_pred HHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCC---CCCceEEEEehhhcCC
Confidence 1469999999999998620 0113457999997753
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.03 E-value=5.5e-05 Score=82.43 Aligned_cols=130 Identities=15% Similarity=0.136 Sum_probs=86.5
Q ss_pred eecccCce-EEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeeEecCCCCCCCC
Q 001152 809 EAGKSVSS-SLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWLPSAD 884 (1137)
Q Consensus 809 ~LG~GsfG-~Vy~a~~~--~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpNIVkllg~~~~~~~~~~~~ 884 (1137)
.+..|.+| .||+.... +..+++|+.... .... +.+|..+|+.+. +--+.++++++.+.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~----~~~E~~~l~~l~~~vPVP~v~~~~~~~~------ 93 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VAND----VTDEMVRLNWLTAFMPLPTIKHFIRTPD------ 93 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHH----HHHHHHHHHHHTTTSCCCCEEEEEEETT------
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhH----HHHHHHHHHHhccCCCcCeEEEEEEECC------
Confidence 44556555 68987764 456888875321 1222 367899998886 333568888877654
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------
Q 001152 885 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------------------- 943 (1137)
Q Consensus 885 g~~~~~~~~l~LVmEy~~ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs~--------------------- 943 (1137)
..++|||+++|.++.+..... ......++.+++..|..||..
T Consensus 94 --------~~~lvme~l~G~~~~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
T 4gkh_A 94 --------DAWLLTTAIPGKTAFQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSR 156 (272)
T ss_dssp --------EEEEEEECCCSEEHHHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHH
T ss_pred --------eEEEEEEeeCCccccccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHH
Confidence 569999999988887765431 112234555566666666631
Q ss_pred -------------------------------------CeeeccCCCCCeEeccccccCCCCCeEEEeecCccc
Q 001152 944 -------------------------------------HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 979 (1137)
Q Consensus 944 -------------------------------------gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~ 979 (1137)
.++|||+.+.|||++.+ ..+-|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~-------~~~~viDwe~a~ 222 (272)
T 4gkh_A 157 MNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEG-------KLIGCIDVGRVG 222 (272)
T ss_dssp HHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETT-------EEEEECCCTTCE
T ss_pred HHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECC-------eEEEEEECcccc
Confidence 26899999999999865 456699999663
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.91 E-value=1.1e-05 Score=79.40 Aligned_cols=70 Identities=20% Similarity=0.180 Sum_probs=59.6
Q ss_pred CEEEccCCCCC--ccCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCCCcchhhccC
Q 001152 213 ISLKVANNKLV--ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLE 284 (1137)
Q Consensus 213 ~~L~Ls~N~Ls--~IP~~l~~L~~L~~LdLS~N~Lsg~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~ 284 (1137)
..++.+++.|+ .||..+. .+|+.|+|++|+|+.+++..|..+++|+.|+|++|+|.|.|.+-.+..|...
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~wl~~ 82 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAG 82 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHHHHT
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHHHHh
Confidence 47888888888 8887654 5799999999999999998899999999999999999999987666665443
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.76 E-value=7.1e-05 Score=86.14 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=53.9
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCC--cceeeeeEecCCCCCC
Q 001152 805 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC--IVEMYGHKISSKWLPS 882 (1137)
Q Consensus 805 ~l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpN--IVkllg~~~~~~~~~~ 882 (1137)
.-.+.++.|.+..+|+.+..+..+++|+.... . . +.+|+.++..+.... +.+++++.....
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~-----~----~----~~~E~~~l~~L~~~gvpvP~vl~~~~~~~---- 106 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVGGRGYVLRVNSCA-----D----G----FYKDRYVYRHFASAALPIPEVLDIGEFSE---- 106 (362)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEESCC-----H----H----HHHHHHHHHHHCCSSSCCCCEEEEEESSS----
T ss_pred ceEEECCCCCcceEEEEEECCcEEEEEeCCch-----h----h----HHHHHHHHHHHHhcCCCCceEEEeccCCC----
Confidence 45677999999999999988888888875211 1 1 267888998887434 456777655431
Q ss_pred CCCCCccccceEEEEEeeccCCCH
Q 001152 883 ADGNPEHHLLQSAIFMEYVKGGSV 906 (1137)
Q Consensus 883 ~~g~~~~~~~~l~LVmEy~~ggSL 906 (1137)
...|+||||++|.++
T Consensus 107 ---------g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 107 ---------SLTYCISRRAQGVTL 121 (362)
T ss_dssp ---------SCEEEEEECCCSEET
T ss_pred ---------CCeEEEEEecCCCCc
Confidence 145999999997544
No 423
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.62 E-value=0.00024 Score=79.05 Aligned_cols=75 Identities=19% Similarity=0.142 Sum_probs=53.2
Q ss_pred EeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCC---CcceeeeeEecCCCCC
Q 001152 806 SCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS---CIVEMYGHKISSKWLP 881 (1137)
Q Consensus 806 l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~Hp---NIVkllg~~~~~~~~~ 881 (1137)
-.+.||.|.++.||+++.. +..++||+..... ..... .+.+|++.|+.+.+. .+.+++++. .
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~----~~~~~----~~~~E~~~L~~L~~~~~v~vP~v~~~~--~---- 84 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDG----LFRAEALGLDWLGRSFGSPVPQVAGWD--D---- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTT----HHHHHHHHHHHHTCSTTCCSCCEEEEE--T----
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC----cchhH----HHHHHHHHHHHHHhcCCCCcCeEEEec--C----
Confidence 4578999999999999875 5678998742211 10111 237799999999865 567787753 1
Q ss_pred CCCCCCccccceEEEEEeeccCCCH
Q 001152 882 SADGNPEHHLLQSAIFMEYVKGGSV 906 (1137)
Q Consensus 882 ~~~g~~~~~~~~l~LVmEy~~ggSL 906 (1137)
.++||||++|+++
T Consensus 85 ------------~~lvme~l~g~~~ 97 (288)
T 3d1u_A 85 ------------RTLAMEWVDERPP 97 (288)
T ss_dssp ------------TEEEEECCCCCCC
T ss_pred ------------cEEEEEecccCCC
Confidence 2899999998764
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.59 E-value=9.5e-05 Score=84.14 Aligned_cols=85 Identities=11% Similarity=-0.015 Sum_probs=51.6
Q ss_pred Eeeee-cccCceEEEEEEEC--------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-C--CCcceeeee
Q 001152 806 SCDEA-GKSVSSSLFRCKFG--------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H--SCIVEMYGH 873 (1137)
Q Consensus 806 l~~~L-G~GsfG~Vy~a~~~--------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-H--pNIVkllg~ 873 (1137)
..+.| +.|....+|+.... +..+++|+.......... ... .+.+|+.+++.+. + -.+.+++++
T Consensus 24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~-~~~----~~~~E~~~l~~L~~~~~vpvP~v~~~ 98 (357)
T 3ats_A 24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVF-PTY----RLDHQFEVIRLVGELTDVPVPRVRWI 98 (357)
T ss_dssp EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSS-SCC----CHHHHHHHHHHHHHHCCSCCCCEEEE
T ss_pred EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccC-chh----HHHHHHHHHHHHhhcCCCCCCcEEEE
Confidence 45678 89999999998765 556777763221100000 001 2366888888885 3 346678877
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCH
Q 001152 874 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSV 906 (1137)
Q Consensus 874 ~~~~~~~~~~~g~~~~~~~~l~LVmEy~~ggSL 906 (1137)
..+.... ...++||||++|..+
T Consensus 99 ~~~~~~~-----------g~~~~v~e~l~G~~l 120 (357)
T 3ats_A 99 ETTGDVL-----------GTPFFLMDYVEGVVP 120 (357)
T ss_dssp ECSSTTT-----------SSCEEEEECCCCBCC
T ss_pred ccCCCcc-----------CCceEEEEecCCCCh
Confidence 6543211 134899999998654
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.52 E-value=0.0019 Score=72.36 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=25.8
Q ss_pred CCeeeccCCCCCeEeccccccCCCCCeEEEeecCccc
Q 001152 943 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 979 (1137)
Q Consensus 943 ~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~ 979 (1137)
.++||||+++.|||++.+ +.+.|+||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~-------~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGEN-------EQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGG-------GCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCC-------CcEEEEehhhcc
Confidence 579999999999999766 568999999763
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.40 E-value=0.00034 Score=81.00 Aligned_cols=82 Identities=12% Similarity=0.002 Sum_probs=46.1
Q ss_pred EeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC--CCcc-eeeeeEecCCCC
Q 001152 806 SCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SCIV-EMYGHKISSKWL 880 (1137)
Q Consensus 806 l~~~LG~GsfG~Vy~a~~--~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~H--pNIV-kllg~~~~~~~~ 880 (1137)
-.+.||.|.++.||+++. .+..+++|.........+ +.......++..|+++|+.+.. |..+ +++.+. ..
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~-~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~-- 108 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVG-ESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE-- 108 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC--------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccC-CCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--
Confidence 346899999999999964 456788886432111000 0000011233668888887742 4333 555432 22
Q ss_pred CCCCCCCccccceEEEEEeeccCC
Q 001152 881 PSADGNPEHHLLQSAIFMEYVKGG 904 (1137)
Q Consensus 881 ~~~~g~~~~~~~~l~LVmEy~~gg 904 (1137)
..++||||+++.
T Consensus 109 ------------~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 ------------MAVTVMEDLSHL 120 (397)
T ss_dssp ------------TTEEEECCCTTS
T ss_pred ------------ccEEEEEeCCCc
Confidence 238999999863
No 427
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.92 E-value=0.0028 Score=74.04 Aligned_cols=32 Identities=9% Similarity=0.351 Sum_probs=26.9
Q ss_pred HhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCcccc
Q 001152 941 HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 980 (1137)
Q Consensus 941 Hs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~ 980 (1137)
+...++|||++|.|||++.+ + ++|+||+.+..
T Consensus 230 ~~~~liHGDl~~~Nil~~~~-------~-~~lID~e~a~~ 261 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQD-------S-TQVIDPEFSFY 261 (420)
T ss_dssp BCCEEECSCCSGGGEEECSS-------C-EEECCCTTCEE
T ss_pred CCCeEEecCCCCCcEEEeCC-------C-CEEEeCccccc
Confidence 35679999999999999865 3 89999998764
No 428
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.74 E-value=0.0052 Score=68.18 Aligned_cols=71 Identities=13% Similarity=0.145 Sum_probs=43.1
Q ss_pred eeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCc-ceeeeeEecCCCCCCCCC
Q 001152 807 CDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKISSKWLPSADG 885 (1137)
Q Consensus 807 ~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNI-Vkllg~~~~~~~~~~~~g 885 (1137)
.+.|+.|....+|++ ..+++|+..... ..... ..+|+.+++.+....+ .+++++..+.
T Consensus 23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~-----~~~~~----r~~E~~~l~~l~~~g~~P~~~~~~~~~-------- 81 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA----GDLCLRIPGKGT-----EEYIN----RANEAVAAREAAKAGVSPEVLHVDPAT-------- 81 (301)
T ss_dssp CEEEESCSSEEEEEE----TTEEEEEECC---------CCC----HHHHHHHHHHHHHTTSSCCEEEECTTT--------
T ss_pred eeEcCCcccccccee----eeEEEECCCCCc-----cceeC----HHHHHHHHHHHHHcCCCCceEEEECCC--------
Confidence 678999999999999 678888754221 11101 1347777777652233 3565543221
Q ss_pred CCccccceEEEEEeec-cCCCH
Q 001152 886 NPEHHLLQSAIFMEYV-KGGSV 906 (1137)
Q Consensus 886 ~~~~~~~~l~LVmEy~-~ggSL 906 (1137)
-++||||+ +|.+|
T Consensus 82 --------~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 82 --------GVMVTRYIAGAQTM 95 (301)
T ss_dssp --------CCEEEECCTTCEEC
T ss_pred --------CEEEEeecCCCccC
Confidence 27899999 65444
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.66 E-value=0.002 Score=63.00 Aligned_cols=54 Identities=28% Similarity=0.340 Sum_probs=24.5
Q ss_pred EEEccCCCCC--ccchhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeccCCcCC
Q 001152 191 QLDLSFNKMK--YLPTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLT 246 (1137)
Q Consensus 191 ~L~Ls~N~L~--~LP~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~LdLS~N~Ls 246 (1137)
.++.+++.|+ .+|..+. .+|+.|+|++|+|+.||.. |..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3444444444 4443321 2344555555555555433 233455555555555443
No 430
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.64 E-value=0.025 Score=63.63 Aligned_cols=76 Identities=12% Similarity=0.044 Sum_probs=55.6
Q ss_pred EeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC---CCCcceeeeeEecCCCCCC
Q 001152 806 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMYGHKISSKWLPS 882 (1137)
Q Consensus 806 l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~---HpNIVkllg~~~~~~~~~~ 882 (1137)
-.+.|+.|.+..+|+....+..+++|+.... ... .+.+|++.|+.+. ...+.+++++....+
T Consensus 40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-------~~~----~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g---- 104 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDEVQTVFVKINERS-------YRS----MFRAEADQLALLAKTNSINVPLVYGIGNSQG---- 104 (312)
T ss_dssp EEEEECCSSSSEEEEEESSSCEEEEEEEEGG-------GHH----HHHHHHHHHHHHHHTTSSBCCCEEEEEECSS----
T ss_pred eeEEeCCccceeeeEEEECCCeEEEEeCCcc-------cHH----HHHHHHHHHHHHHhhCCCCcceEEEEeecCC----
Confidence 3467899999999999987788888875421 112 2367888888885 255778888766443
Q ss_pred CCCCCccccceEEEEEeeccCCCH
Q 001152 883 ADGNPEHHLLQSAIFMEYVKGGSV 906 (1137)
Q Consensus 883 ~~g~~~~~~~~l~LVmEy~~ggSL 906 (1137)
..++||||++|..+
T Consensus 105 ----------~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 105 ----------HSFLLLEALNKSKN 118 (312)
T ss_dssp ----------EEEEEEECCCCCCC
T ss_pred ----------ceEEEEEeccCCCC
Confidence 56999999998753
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.52 E-value=0.0015 Score=68.56 Aligned_cols=109 Identities=15% Similarity=0.124 Sum_probs=72.2
Q ss_pred hcCCCCCcEEeccCC-CCcc-----cCccccCCCCCCEEEccCCCCC-----ccchhhcCCCCCCEEEccCCCCC-----
Q 001152 160 IAGLKCLTKLSVCHF-SIRY-----LPPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLV----- 223 (1137)
Q Consensus 160 l~~L~~L~~L~Ls~N-~L~~-----IP~~l~~L~~L~~L~Ls~N~L~-----~LP~~l~~L~~L~~L~Ls~N~Ls----- 223 (1137)
+.+-+.|+.|+|++| .|.. |-..+..-+.|+.|+|++|+|. .|-..+..-+.|+.|+|++|.|+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344567888888875 7652 3334555567888888888887 34455666678888888888887
Q ss_pred ccCccccCCCCCCEEeccCCcC---CCC----CcccccCCCCCCEEEccCCc
Q 001152 224 ELPSGLYLLQRLENLDLSNNRL---TSL----GSLDLCLMHNLQNLNLQYNK 268 (1137)
Q Consensus 224 ~IP~~l~~L~~L~~LdLS~N~L---sg~----~p~~l~~L~~L~~L~Ls~N~ 268 (1137)
.|-..+..-+.|+.|+|++|.. ... +...+..-+.|..|+|+.|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 2334455556788899886533 321 12234455678888887765
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.30 E-value=0.02 Score=63.81 Aligned_cols=149 Identities=15% Similarity=0.129 Sum_probs=76.3
Q ss_pred EeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCC--cceeeeeEecCCCCCCC
Q 001152 806 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC--IVEMYGHKISSKWLPSA 883 (1137)
Q Consensus 806 l~~~LG~GsfG~Vy~a~~~~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpN--IVkllg~~~~~~~~~~~ 883 (1137)
-.+.|+.|....+|++...+..+++|+..... .. +. +..|+.++..+.... +.+++... +...+.
T Consensus 26 ~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~---~~---~~----l~~e~~~l~~L~~~g~~vP~~~~~~-~g~~~~-- 92 (322)
T 2ppq_A 26 SYKGIAEGVENSNFLLHTTKDPLILTLYEKRV---EK---ND----LPFFLGLMQHLAAKGLSCPLPLPRK-DGELLG-- 92 (322)
T ss_dssp EEEEECC---EEEEEEEESSCCEEEEEECC------C---CH----HHHHHHHHHHHHHTTCCCCCBCCBT-TCCSCE--
T ss_pred EeeccCCCcccceEEEEeCCccEEEEEeCCCC---CH---HH----HHHHHHHHHHHHHCCCCCCcccCCC-CCCEEE--
Confidence 45678889999999998876678888754211 01 11 244777777664212 23333221 000000
Q ss_pred CCCCccccceEEEEEeeccCCCHH-----------HH---HHHhhhc-CCCC---CC---HHHHHH------------HH
Q 001152 884 DGNPEHHLLQSAIFMEYVKGGSVK-----------NY---IEKLSET-GEKH---VS---VKLALF------------IA 930 (1137)
Q Consensus 884 ~g~~~~~~~~l~LVmEy~~ggSL~-----------~~---L~~~~~~-~~~~---ls---~~~i~~------------I~ 930 (1137)
......++||+|++|..+. .. ++..... .... .. |..... +.
T Consensus 93 -----~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~ 167 (322)
T 2ppq_A 93 -----ELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLR 167 (322)
T ss_dssp -----EETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHH
T ss_pred -----EECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhH
Confidence 0011458999999976431 11 2221100 0000 11 111000 01
Q ss_pred HHHHHHHHHHHh-------CCeeeccCCCCCeEeccccccCCCCCeEEEeecCccc
Q 001152 931 QDVAAALVELHS-------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 979 (1137)
Q Consensus 931 ~QIa~gL~yLHs-------~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~ 979 (1137)
..+...+++++. .++||+|+.+.|||++.+ ..+.|+||+.+.
T Consensus 168 ~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~-------~~~~lIDf~~a~ 216 (322)
T 2ppq_A 168 EEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGD-------ELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETT-------EEEEECCCTTCE
T ss_pred HHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCC-------ceEEEecchhcc
Confidence 123445555552 369999999999999865 345799998664
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.21 E-value=0.0033 Score=65.96 Aligned_cols=87 Identities=13% Similarity=0.070 Sum_probs=43.1
Q ss_pred CCCCCCCCEEEccCC-CCCCCCcc-cccCCCCCCCccEEEeecCCCC-----ccCccccCCCCCcEEEccCCCCC-----
Q 001152 37 VNDDDDDSVIDVSGK-TVDFPLIE-SYGNRGGDNSVEGLYLYKNVLN-----LIPKSVGRYEKLRNLKFFGNEIN----- 104 (1137)
Q Consensus 37 f~~l~~L~~LdLs~N-~L~~~~p~-~~~~l~~L~~L~~L~Ls~N~L~-----~IP~~~~~L~~L~~L~Ls~N~L~----- 104 (1137)
+.+.+.|+.|+|++| +|...--. ....+..-+.|+.|+|++|.|+ .|-..+..-+.|+.|+|++|.|+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445566677777664 55321100 1111222355666666666665 22333444456666666666665
Q ss_pred cccccccCCCCCCEEEccC
Q 001152 105 LFPSEVGNLLGLECLQIKI 123 (1137)
Q Consensus 105 ~lP~~l~~L~~L~~L~Ls~ 123 (1137)
.|-..+..-+.|+.|+|++
T Consensus 117 ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHHTTTTCCCSEEECCC
T ss_pred HHHHHHhhCCceeEEECCC
Confidence 2233344444455555543
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.19 E-value=0.0019 Score=66.64 Aligned_cols=81 Identities=14% Similarity=0.174 Sum_probs=46.4
Q ss_pred CCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCC-CCc-cCccccCC----CCCCEEeccCC-cCCCCCcccccCCCCC
Q 001152 188 NLEQLDLSFNKMKYL-PTEICYLKALISLKVANNK-LVE-LPSGLYLL----QRLENLDLSNN-RLTSLGSLDLCLMHNL 259 (1137)
Q Consensus 188 ~L~~L~Ls~N~L~~L-P~~l~~L~~L~~L~Ls~N~-Ls~-IP~~l~~L----~~L~~LdLS~N-~Lsg~~p~~l~~L~~L 259 (1137)
+|+.|||+++.|+.. -..+..+++|+.|+|+++. |+. -=..+..+ ++|+.|+|+++ ++|...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 566777777666521 1245566777777777764 552 11223332 35777777775 3663222345667777
Q ss_pred CEEEccCCc
Q 001152 260 QNLNLQYNK 268 (1137)
Q Consensus 260 ~~L~Ls~N~ 268 (1137)
+.|+|++.+
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777764
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.18 E-value=0.013 Score=65.85 Aligned_cols=35 Identities=34% Similarity=0.468 Sum_probs=26.3
Q ss_pred CCeeeccCCCCCeEeccccccCCCCCeEEEeecCcccc
Q 001152 943 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 980 (1137)
Q Consensus 943 ~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~ 980 (1137)
..++|||+.+.|||++.+. .+...+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~---~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPER---EGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTS---CGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCc---CCCCCeEEEeCCCcCc
Confidence 4799999999999997631 0113589999998753
No 436
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.01 E-value=0.045 Score=60.08 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=49.0
Q ss_pred eEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-C--CCcceeeeeEecCCCC
Q 001152 805 SSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H--SCIVEMYGHKISSKWL 880 (1137)
Q Consensus 805 ~l~~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-H--pNIVkllg~~~~~~~~ 880 (1137)
.-.+.+|.|..+.||+++.. ++.+.+|+...... . . .. .+.+|++.|+.+. . --+.+++++. ..
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~-~-~--~~----~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~~-- 85 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP-A-L--DG----LFRAEALGLDWLGRSFGSPVPQVAGWD--DR-- 85 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-C-C--TT----HHHHHHHHHHHHTCSTTCCSCCEEEEE--TT--
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc-c-h--hh----HHHHHHHHHHHHHhhCCCCcceEEecc--Cc--
Confidence 45678999999999999985 57888886432211 1 1 11 1367889998885 2 2344555542 22
Q ss_pred CCCCCCCccccceEEEEEeeccCCC
Q 001152 881 PSADGNPEHHLLQSAIFMEYVKGGS 905 (1137)
Q Consensus 881 ~~~~g~~~~~~~~l~LVmEy~~ggS 905 (1137)
++||||++++.
T Consensus 86 --------------~lv~e~l~~~~ 96 (288)
T 3f7w_A 86 --------------TLAMEWVDERP 96 (288)
T ss_dssp --------------EEEEECCCCCC
T ss_pred --------------eEEEEeecccC
Confidence 79999998764
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.93 E-value=0.058 Score=63.83 Aligned_cols=72 Identities=17% Similarity=0.133 Sum_probs=46.0
Q ss_pred eeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcc-eeeeeEecCCCCCCC
Q 001152 807 CDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIV-EMYGHKISSKWLPSA 883 (1137)
Q Consensus 807 ~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIV-kllg~~~~~~~~~~~ 883 (1137)
.+.|+.|-...+|++...+ ..+++|+.... ... . .. ..+|..+++.+...+++ ++++.+. +
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~-~~~-~--id-----R~~E~~vl~~L~~~gl~P~ll~~~~--~----- 176 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPK-TDE-I--IN-----REREKKISCILYNKNIAKKIYVFFT--N----- 176 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC--CCS-C--SC-----HHHHHHHHHHHTTSSSBCCEEEEET--T-----
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCC-hhh-h--cC-----HHHHHHHHHHHHhcCCCCCEEEEeC--C-----
Confidence 4678889999999999876 77888875321 110 0 00 03588899988755554 6776652 2
Q ss_pred CCCCccccceEEEEEeeccCCC
Q 001152 884 DGNPEHHLLQSAIFMEYVKGGS 905 (1137)
Q Consensus 884 ~g~~~~~~~~l~LVmEy~~ggS 905 (1137)
.+||||++|.+
T Consensus 177 -----------G~v~e~I~G~~ 187 (458)
T 2qg7_A 177 -----------GRIEEFMDGYA 187 (458)
T ss_dssp -----------EEEEECCCSEE
T ss_pred -----------eEEEEeeCCcc
Confidence 46999998743
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.30 E-value=0.042 Score=63.44 Aligned_cols=143 Identities=17% Similarity=0.229 Sum_probs=78.1
Q ss_pred eeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeeEecC
Q 001152 808 DEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS 877 (1137)
Q Consensus 808 ~~LG~GsfG~Vy~a~~~---------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~-HpNIVkllg~~~~~ 877 (1137)
+.|..|-...+|++... +..+++++. ... .. ..... .+|.++++.+. +.-..++++++.
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~-g~~-~~---~~~~~----~rE~~vl~~L~~~gv~P~ll~~~~-- 124 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLY-GAI-LQ---GVDSL----VLESVMFAILAERSLGPQLYGVFP-- 124 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEEC-C----C---CHHHH----HHHHHHHHHHHHTTSSCCEEEEET--
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEEC-CCc-cc---hHHHH----HHHHHHHHHHHhcCCCCeEEEEcC--
Confidence 56777888889998874 256777763 111 11 11122 56888888886 322346666543
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHH--------------HHHHHhhhcC---CCCC--CHHHHHHHHHHHHH---
Q 001152 878 KWLPSADGNPEHHLLQSAIFMEYVKGGSVK--------------NYIEKLSETG---EKHV--SVKLALFIAQDVAA--- 935 (1137)
Q Consensus 878 ~~~~~~~g~~~~~~~~l~LVmEy~~ggSL~--------------~~L~~~~~~~---~~~l--s~~~i~~I~~QIa~--- 935 (1137)
+ .+||||++|.+|. +.+.+..... .... -+.++.++..++..
T Consensus 125 ~----------------g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~ 188 (379)
T 3feg_A 125 E----------------GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPP 188 (379)
T ss_dssp T----------------EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCC
T ss_pred C----------------ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccC
Confidence 1 4899999875432 2222222111 1112 24566666655532
Q ss_pred ----------------HHHHHHh--------CCeeeccCCCCCeEeccccccCCCCCeEEEeecCcccc
Q 001152 936 ----------------ALVELHS--------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 980 (1137)
Q Consensus 936 ----------------gL~yLHs--------~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~ 980 (1137)
.+..|.+ ..++|+|+.+.|||++.+. ...+.+.|+||..+..
T Consensus 189 ~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~---~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 189 TGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEP---ENADSLMLVDFEYSSY 254 (379)
T ss_dssp CSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC------CCEEECCCTTCEE
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCC---CccCcEEEEecccCCc
Confidence 2333332 2589999999999998651 1124689999997753
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.26 E-value=0.12 Score=54.92 Aligned_cols=100 Identities=15% Similarity=0.099 Sum_probs=62.6
Q ss_pred CCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeEeccccccCCCCCeEEEeecCcccccc
Q 001152 904 GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLR 982 (1137)
Q Consensus 904 gSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~yLHs-~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~~~ 982 (1137)
-||.++|+.+ +.++++++++.++.|.+.+|.-+-. +.-..+=+-|..|++..+ |.|-+.+ +.+.
T Consensus 33 vSL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~d-------G~V~f~~-~~s~--- 97 (229)
T 2yle_A 33 LSLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRD-------GAVTLAP-AADD--- 97 (229)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETT-------SCEEECC-C------
T ss_pred ccHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecC-------Cceeccc-cccc---
Confidence 3899999863 3579999999999999999877621 111122234578888877 6675542 1110
Q ss_pred ccccccccccCCCCCCCcccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001152 983 SFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1042 (1137)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG~ 1042 (1137)
.....+.|||... ...+.+.=|||||++||.-+--.
T Consensus 98 -------------------~~~~~~~~pe~~~-----~~~te~~~IysLG~tLY~ALDyg 133 (229)
T 2yle_A 98 -------------------AGEPPPVAGKLGY-----SQCMETEVIESLGIIIYKALDYG 133 (229)
T ss_dssp ----------------------------CCSS-----SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred -------------------ccccCCCChhhcc-----ccchHHHHHHHHHHHHHHHhhcC
Confidence 0112566888753 24568899999999999887543
No 440
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.10 E-value=0.015 Score=59.84 Aligned_cols=79 Identities=11% Similarity=0.103 Sum_probs=38.9
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC-CCcc-CccccCC----CCCcEEEccCCC-CC--ccccccc
Q 001152 41 DDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV-LNLI-PKSVGRY----EKLRNLKFFGNE-IN--LFPSEVG 111 (1137)
Q Consensus 41 ~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~-L~~I-P~~~~~L----~~L~~L~Ls~N~-L~--~lP~~l~ 111 (1137)
..|+.|||+++.|+.. .+..+.++++|++|+|+++. |+.- =..|..+ ++|++|+|+++. || .+ ..+.
T Consensus 61 ~~L~~LDLs~~~Itd~---GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl-~~L~ 136 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSI---GFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI-IALH 136 (176)
T ss_dssp CCEEEEEEESCCCCGG---GGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH-HHGG
T ss_pred ceEeEEeCcCCCccHH---HHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH-HHHh
Confidence 3566666666665432 23333455666666666653 4421 1223333 246666666653 55 12 1244
Q ss_pred CCCCCCEEEccC
Q 001152 112 NLLGLECLQIKI 123 (1137)
Q Consensus 112 ~L~~L~~L~Ls~ 123 (1137)
++++|+.|+|++
T Consensus 137 ~~~~L~~L~L~~ 148 (176)
T 3e4g_A 137 HFRNLKYLFLSD 148 (176)
T ss_dssp GCTTCCEEEEES
T ss_pred cCCCCCEEECCC
Confidence 455555555543
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=94.94 E-value=0.088 Score=59.94 Aligned_cols=72 Identities=11% Similarity=0.193 Sum_probs=41.1
Q ss_pred eeeecccCceEEEEEEECC----------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCC-cceeeeeEe
Q 001152 807 CDEAGKSVSSSLFRCKFGS----------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC-IVEMYGHKI 875 (1137)
Q Consensus 807 ~~~LG~GsfG~Vy~a~~~~----------~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpN-IVkllg~~~ 875 (1137)
.+.|+.|....+|++...+ ..+++|+.... ...... ...|..+++.+.... +.++++..
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~-----~~~~~~----~~~E~~~l~~L~~~g~~P~~~~~~- 107 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKH-----VDELYN----TISEFEVYKTMSKYKIAPQLLNTF- 107 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTT-----GGGTSC----HHHHHHHHHHHHHTTSSCCEEEEE-
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCC-----ccceec----HHHHHHHHHHHHhcCCCCceEEec-
Confidence 4578888889999998754 56777764211 111111 145778888776333 34666543
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCC
Q 001152 876 SSKWLPSADGNPEHHLLQSAIFMEYVKGGS 905 (1137)
Q Consensus 876 ~~~~~~~~~g~~~~~~~~l~LVmEy~~ggS 905 (1137)
.+ ++||||++|.+
T Consensus 108 -~~----------------~~v~e~i~G~~ 120 (369)
T 3c5i_A 108 -NG----------------GRIEEWLYGDP 120 (369)
T ss_dssp -TT----------------EEEEECCCSEE
T ss_pred -CC----------------cEEEEEecCCc
Confidence 22 78999998753
No 442
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=94.69 E-value=0.18 Score=59.01 Aligned_cols=70 Identities=16% Similarity=0.259 Sum_probs=45.4
Q ss_pred eeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCc-ceeeeeEec
Q 001152 807 CDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKIS 876 (1137)
Q Consensus 807 ~~~LG~GsfG~Vy~a~~~---------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNI-Vkllg~~~~ 876 (1137)
.+.|+.|-...||++... +..+++|+.... .. .+.+ .+|+.+++.+...++ .++++.+.
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~--~~~l----i~E~~~l~~L~~~g~~P~l~~~~~- 146 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ET--ESHL----VAESVIFTLLSERHLGPKLYGIFS- 146 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CC--HHHH----HHHHHHHHHHHHTTSSSCEEEEET-
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----Cc--HHHH----HHHHHHHHHHHhCCCCCcEEEEeC-
Confidence 467888999999999874 356888875211 11 0122 468888888863344 46666542
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCC
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGG 904 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~gg 904 (1137)
+ .+||||++|.
T Consensus 147 -~----------------g~v~e~l~G~ 157 (429)
T 1nw1_A 147 -G----------------GRLEEYIPSR 157 (429)
T ss_dssp -T----------------EEEECCCCEE
T ss_pred -C----------------CEEEEEeCCc
Confidence 2 4899999863
No 443
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=94.45 E-value=0.18 Score=55.95 Aligned_cols=79 Identities=14% Similarity=0.041 Sum_probs=43.5
Q ss_pred eeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCC--CcceeeeeEecCCCCCCCC
Q 001152 808 DEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS--CIVEMYGHKISSKWLPSAD 884 (1137)
Q Consensus 808 ~~LG~GsfG~Vy~a~~~-~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~Hp--NIVkllg~~~~~~~~~~~~ 884 (1137)
..++ |....||++... +..+++|+..... .... . +..|+.++..+... .+++++.. +...+.
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~---~----~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~--- 96 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTAD---Q----ILEEHQFALQLVNDEVPVAAPVAF--NGQTLL--- 96 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHH---H----HHHHHHHHHHHHHTTCSBCCCCCB--TTBSCE---
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHH---H----HHHHHHHHHHHHHcCCeecceeec--CCcEEE---
Confidence 3566 888899998764 3478899853111 1111 2 24577777777521 24455543 111100
Q ss_pred CCCccccceEEEEEeeccCCC
Q 001152 885 GNPEHHLLQSAIFMEYVKGGS 905 (1137)
Q Consensus 885 g~~~~~~~~l~LVmEy~~ggS 905 (1137)
......++||||++|..
T Consensus 97 ----~~~g~~~~l~~~i~G~~ 113 (328)
T 1zyl_A 97 ----NHQGFYFAVFPSVGGRQ 113 (328)
T ss_dssp ----EETTEEEEEEECCCCEE
T ss_pred ----EECCEEEEEEEecCCCC
Confidence 00114588999998743
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=93.07 E-value=0.77 Score=51.71 Aligned_cols=30 Identities=27% Similarity=0.492 Sum_probs=25.8
Q ss_pred CeeeccCCCCCeEeccccccCCCCCeEEEeecCcccc
Q 001152 944 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 980 (1137)
Q Consensus 944 gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~ 980 (1137)
.++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 207 ~~~HgD~~~~N~l~~~~-------~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 207 VLCHSDIHAGNVLVGNE-------ESIYIIDWDEPML 236 (339)
T ss_dssp EEECSCCCGGGEEECGG-------GCEEECCCSSCEE
T ss_pred eeEeCCCCcCCEEEeCC-------CeEEEEECCCCee
Confidence 68999999999999866 5689999987754
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.04 E-value=0.49 Score=55.34 Aligned_cols=72 Identities=11% Similarity=0.148 Sum_probs=44.7
Q ss_pred eeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCc-ceeeeeEec
Q 001152 807 CDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKIS 876 (1137)
Q Consensus 807 ~~~LG~GsfG~Vy~a~~~---------~~~vAVKi~~l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNI-Vkllg~~~~ 876 (1137)
.+.+..|-...+|++... +..+++++.. ... ...-. ..+|..+++.+.-..| .++++.+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g-~~t----~~~id----R~~E~~~l~~L~~~gi~P~l~~~~-- 143 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYG-KHV----GKFYD----SKVELDVFRYLSNINIAPNIIADF-- 143 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECC-CCC-----CCCC----HHHHHHHHHHHHHTTSSCCEEEEE--
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECC-CCc----chhcC----HHHHHHHHHHHHhcCCCCCEEEEc--
Confidence 466778888999999876 4667777642 211 11101 1457788887763233 4666532
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCC
Q 001152 877 SKWLPSADGNPEHHLLQSAIFMEYVKGGS 905 (1137)
Q Consensus 877 ~~~~~~~~g~~~~~~~~l~LVmEy~~ggS 905 (1137)
.+ ++||||++|..
T Consensus 144 ~~----------------~~I~efI~G~~ 156 (424)
T 3mes_A 144 PE----------------GRIEEFIDGEP 156 (424)
T ss_dssp TT----------------EEEEECCCSEE
T ss_pred CC----------------CEEEEEeCCcc
Confidence 22 78999999764
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.26 E-value=1.7 Score=50.41 Aligned_cols=35 Identities=29% Similarity=0.368 Sum_probs=25.9
Q ss_pred CeeeccCCCCCeEeccccccCCCCCeEEEeecCccc
Q 001152 944 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 979 (1137)
Q Consensus 944 gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~ 979 (1137)
.++|+|+.+.|||++.+.. ....+.+.|+||..|.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~-~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRE-NSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGG-GCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcc-cCcccceEEEeeccCC
Confidence 5889999999999976521 1112468999998775
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=85.61 E-value=2.1 Score=49.32 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=25.6
Q ss_pred eeeccCCCCCeEeccccccCCCCCeEEEeecCcccc
Q 001152 945 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 980 (1137)
Q Consensus 945 IIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~~ 980 (1137)
++|+|+.+.|||+..+.. ......+.++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~-~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRE-NSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGG-GCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcc-cCcCCeEEEechHhccC
Confidence 679999999999965321 11225799999998854
No 448
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=80.53 E-value=0.61 Score=51.78 Aligned_cols=43 Identities=30% Similarity=0.422 Sum_probs=37.8
Q ss_pred ccchhhhHHHHHHHhhhccCCCCccccccccccc----CCCccceeEEe
Q 001152 700 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDF----QPHAWNTILVK 744 (1137)
Q Consensus 700 ~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~----~~~~~~~~~~~ 744 (1137)
..|+|++-|.||-.||-.++ ||||.|-||..- ..|||..+-+.
T Consensus 177 ~~G~C~d~A~l~val~Ra~G--IPAR~VsGy~~~~~~~~~HAW~Evyl~ 223 (293)
T 3isr_A 177 RAGVCRDFAHLGIALCRALS--IPARYFTGYAFKLNPPDFHACFEAYIG 223 (293)
T ss_dssp CEECHHHHHHHHHHHHHHTT--CCEEEEEEEETTCSSCCEEEEEEEEET
T ss_pred CcEehHHHHHHHHHHHHHCC--CCEEEEEEECCCCCCCCeEEEEEEEEC
Confidence 47999999999999999999 999999999853 46999877664
No 449
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=78.80 E-value=0.7 Score=51.03 Aligned_cols=45 Identities=20% Similarity=0.528 Sum_probs=38.6
Q ss_pred ccchhhhHHHHHHHhhhccCCCCcccccccccccCCCccceeEEeeCCch
Q 001152 700 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQPHAWNTILVKKGDSW 749 (1137)
Q Consensus 700 ~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 749 (1137)
..|+|++-|.||-.||-.++ ||+|.|-|| ..|+|..+-+.....|
T Consensus 139 r~G~C~d~A~lf~al~Ra~G--IpAR~V~Gy---~~HaW~Evy~~g~~gW 183 (295)
T 2f4m_A 139 RCGRCGEWANCFTLCCRALG--FEARYVWDY---TDHVWTEVYSPSQQRW 183 (295)
T ss_dssp CEESHHHHHHHHHHHHHHTT--CCEEEEEET---TTEEEEEEEETTTTEE
T ss_pred CCEeeHHHHHHHHHHHHHCC--CCEEEEcCC---CCEEEEEEEECCCCeE
Confidence 57999999999999999999 999999998 7899987776542334
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=61.76 E-value=0.66 Score=54.86 Aligned_cols=64 Identities=11% Similarity=0.046 Sum_probs=18.0
Q ss_pred EeeeecccCceEEEEEEECC--ccEEEEEEe----cccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeeEec
Q 001152 806 SCDEAGKSVSSSLFRCKFGS--ADAAAKVRT----LKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 876 (1137)
Q Consensus 806 l~~~LG~GsfG~Vy~a~~~~--~~vAVKi~~----l~~~~~~~~~~e~~~~~~lrEi~iL~~L~HpNIVkllg~~~~ 876 (1137)
+.+.|| ||.||++.+.. .+|||+.+. .+......+... .+.+|..+++.++|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~----~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLT----SLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC---------------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccc----cccccccccccccccccCCCcceEEe
Confidence 445676 99999999864 467772111 111111122222 34778899999999999999887654
No 451
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=49.05 E-value=6.3 Score=44.06 Aligned_cols=45 Identities=16% Similarity=0.349 Sum_probs=38.5
Q ss_pred ccchhhhHHHHHHHhhhccCCCCcccccccccccCCCccceeEEeeCCch
Q 001152 700 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQPHAWNTILVKKGDSW 749 (1137)
Q Consensus 700 ~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 749 (1137)
.-|.|.|=|.+|=.||-.++ +|+|+|.| ..+|+|..+.....+.|
T Consensus 180 r~G~C~e~A~lF~~llRalG--i~aR~V~~---~~~H~W~EV~~~~~~rW 224 (335)
T 1x3z_A 180 RKGRCGEWCNLFTLILKSFG--LDVRYVWN---REDHVWCEYFSNFLNRW 224 (335)
T ss_dssp CEECHHHHHHHHHHHHHTTT--CCEEEEEE---TTTEEEEEEEETTTTEE
T ss_pred CCcChHHHHHHHHHHHHHCC--CCeEEEec---CCCcEEEEEEECCCCCE
Confidence 46999999999999999999 99999987 46899988877654445
No 452
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=46.81 E-value=5.4 Score=48.94 Aligned_cols=32 Identities=22% Similarity=0.393 Sum_probs=30.3
Q ss_pred ccccchhhhHHHHHHHhhhccCCCCccccccccc
Q 001152 698 SVQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYL 731 (1137)
Q Consensus 698 ~~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~ 731 (1137)
..++|+|+|=|-+|=.||-.++ ||+|.|-||.
T Consensus 271 ~~k~G~C~dfA~~~~~llRalG--IPAR~VsGy~ 302 (687)
T 2q3z_A 271 RVKYGQCWVFAAVACTVLRCLG--IPTRVVTNYN 302 (687)
T ss_dssp CEEEECHHHHHHHHHHHHHHHT--CCEEEEEEEE
T ss_pred ccceeehHHHHHHHHHHHHhCC--CCcEEEeecc
Confidence 3789999999999999999999 9999999997
No 453
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=42.43 E-value=6 Score=48.45 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=29.5
Q ss_pred cccchhhhHHHHHHHhhhccCCCCccccccccc
Q 001152 699 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYL 731 (1137)
Q Consensus 699 ~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~ 731 (1137)
+++|+|+|=|-+|=.||-.++ ||+|.|-||.
T Consensus 267 V~~G~C~~fA~~~~~~lR~lG--IPaR~Vtgy~ 297 (692)
T 1vjj_A 267 VRYGQCWVFAGTLNTALRSLG--IPSRVITNFN 297 (692)
T ss_dssp EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEE
T ss_pred ccceeeHHHHHHHHHHHHhCC--CCeeEEcccc
Confidence 579999999999999999999 9999999995
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=41.59 E-value=41 Score=35.45 Aligned_cols=48 Identities=6% Similarity=-0.034 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHHHHHHH-HHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCc
Q 001152 921 VSVKLALFIAQDVAAALV-ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDR 977 (1137)
Q Consensus 921 ls~~~i~~I~~QIa~gL~-yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGl 977 (1137)
++...+++++.+|+.... +++ .-+|--|.|+||+++.+ +.++|.-.|+
T Consensus 82 ~~~~eKlrll~nl~~L~~~~~~--~r~tf~l~P~NL~f~~~-------~~p~i~hRGi 130 (219)
T 4ano_A 82 TTLLSRIRAAIHLVSKVKHHSA--RRLIFIVCPENLMFNRA-------LEPFFLHVGV 130 (219)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCS--SSEECCCCGGGEEECTT-------CCEEESCCEE
T ss_pred cCHHHHHHHHHHHHHHHHHhhh--CceeEEEeCceEEEeCC-------CcEEEEEcCC
Confidence 788899999999888655 444 34778899999999988 7899988774
No 455
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=34.70 E-value=11 Score=46.41 Aligned_cols=33 Identities=21% Similarity=0.499 Sum_probs=30.7
Q ss_pred ccccchhhhHHHHHHHhhhccCCCCcccccccccc
Q 001152 698 SVQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLD 732 (1137)
Q Consensus 698 ~~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~ 732 (1137)
.+++|.|.|=|-+|=.++-+++ ||||.|-||..
T Consensus 308 PV~~G~C~~fA~v~~~~lR~lG--IPaRvVtgy~s 340 (731)
T 1ex0_A 308 PVRYGQCWVFAGVFNTFLRCLG--IPARIVTNYFS 340 (731)
T ss_dssp CEEEECHHHHHHHHHHHHHHHT--CCEEEEEEEEE
T ss_pred ccceeeehhHHHHHHHHHHhCC--CCeeEEccccc
Confidence 3689999999999999999999 99999999975
No 456
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=34.29 E-value=28 Score=36.64 Aligned_cols=84 Identities=5% Similarity=-0.026 Sum_probs=56.7
Q ss_pred hCCCCCcceeeeeEecCCCCCCCCCCCccccceEEEEEeecc-CCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 001152 861 ALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVK-GGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVE 939 (1137)
Q Consensus 861 ~L~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~l~LVmEy~~-ggSL~~~L~~~~~~~~~~ls~~~i~~I~~QIa~gL~y 939 (1137)
.-.||+++.. .+-.+.+ .+.+.++.-+ +.++.. ++ .++...+++++.+|+...++
T Consensus 41 ~~~~~~Fl~~-~I~e~eD--------------~v~~~y~~~~~~~~f~~-ik--------~~~~~eKlr~l~ni~~l~~~ 96 (215)
T 4ann_A 41 EQHSPYFIDA-ELTELRD--------------SFQIHYDINDNHTPFDN-IK--------SFTKNEKLRYLLNIKNLEEV 96 (215)
T ss_dssp GSCCTTBCCE-EEEECSS--------------EEEEEECCCTTSEEGGG-GG--------GSCHHHHHHHHHHGGGGGGG
T ss_pred hccCCcccce-EEEEccc--------------EEEEEEEcCcccCCHHH-HH--------hcCHHHHHHHHHHHHHHHHH
Confidence 3468988865 3444443 3455555332 123333 32 47889999999999987755
Q ss_pred HHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCc
Q 001152 940 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDR 977 (1137)
Q Consensus 940 LHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGl 977 (1137)
++.+ +|--|.|+||+++.+ +.+++.-.|+
T Consensus 97 ~~~r--~tf~L~P~NL~f~~~-------~~p~i~~RGi 125 (215)
T 4ann_A 97 NRTR--YTFVLAPDELFFTRD-------GLPIAKTRGL 125 (215)
T ss_dssp GGSS--EECCCSGGGEEECTT-------SCEEESCCEE
T ss_pred hcCc--eEEEEecceEEEcCC-------CCEEEEEccC
Confidence 5433 678899999999988 7899887774
No 457
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=27.25 E-value=18 Score=44.23 Aligned_cols=32 Identities=16% Similarity=0.345 Sum_probs=30.2
Q ss_pred cccchhhhHHHHHHHhhhccCCCCcccccccccc
Q 001152 699 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLD 732 (1137)
Q Consensus 699 ~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~ 732 (1137)
+++|.|+|=|-+|=.|+-.++ ||+|.|-||.+
T Consensus 267 V~~G~C~~fA~v~~t~lR~lG--IPaR~Vtgy~s 298 (695)
T 1g0d_A 267 VKYGQCWVFAAVACTVLRCLG--IPTRPITNFAS 298 (695)
T ss_dssp EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEEE
T ss_pred ccceeeHHHHHHHHHHHHhCC--CCeeEEccccc
Confidence 589999999999999999999 99999999975
No 458
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=20.46 E-value=1.8e+02 Score=35.75 Aligned_cols=45 Identities=16% Similarity=0.129 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHH--HHHHHHhCCeeeccCCCCCeEeccccccCCCCCeEEEeecCccc
Q 001152 924 KLALFIAQDVAA--ALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 979 (1137)
Q Consensus 924 ~~i~~I~~QIa~--gL~yLHs~gIIHrDLKP~NILld~~~~~~~~~~~vKL~DFGla~ 979 (1137)
..+..++..+|- .+.|+= | =||=.++||||+.+ |.+.-+|||.+.
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL--G--lGDRH~~NILid~t-------G~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL--G--VGDRHLDNLLLTTN-------GKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--T--CCCCCTTTEEECTT-------SCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc--c--CCCCCCcceEEeCC-------CCEEEEeehhhh
Confidence 344555555542 233332 2 26889999999965 889999999874
Done!