Query 001154
Match_columns 1136
No_of_seqs 814 out of 5597
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 17:17:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001154.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001154hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 4E-200 9E-205 1809.2 69.8 1046 19-1119 12-1080(1391)
2 PLN03140 ABC transporter G fam 100.0 2E-182 5E-187 1774.8 105.2 1113 6-1118 24-1169(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 6E-143 1E-147 1411.1 98.5 994 77-1116 3-1049(1394)
4 KOG0061 Transporter, ABC super 100.0 8.3E-82 1.8E-86 767.7 54.5 585 97-758 21-608 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 6.3E-81 1.4E-85 769.8 56.7 569 145-757 35-612 (617)
6 PLN03211 ABC transporter G-25; 100.0 6.3E-80 1.4E-84 759.3 61.6 607 97-758 35-658 (659)
7 PLN03140 ABC transporter G fam 100.0 1.6E-78 3.5E-83 795.4 60.4 597 95-759 861-1467(1470)
8 KOG0065 Pleiotropic drug resis 100.0 3.5E-76 7.7E-81 721.5 34.4 560 146-758 802-1383(1391)
9 KOG0055 Multidrug/pheromone ex 100.0 2.6E-73 5.7E-78 698.8 54.2 777 144-1054 362-1208(1228)
10 TIGR00956 3a01205 Pleiotropic 100.0 1.1E-72 2.4E-77 744.5 59.8 559 147-757 775-1389(1394)
11 TIGR01257 rim_protein retinal- 100.0 1.4E-71 3.1E-76 728.6 68.4 201 842-1054 1952-2154(2272)
12 KOG0054 Multidrug resistance-a 100.0 2.3E-72 5E-77 707.5 53.5 756 148-1055 534-1358(1381)
13 PLN03130 ABC transporter C fam 100.0 1.4E-67 3.1E-72 702.4 61.4 211 816-1055 1237-1457(1622)
14 PLN03232 ABC transporter C fam 100.0 9.2E-67 2E-71 695.4 59.7 210 816-1054 1234-1453(1495)
15 COG1123 ATPase components of v 100.0 7.7E-67 1.7E-71 603.9 49.7 474 148-1054 22-514 (539)
16 TIGR00957 MRP_assoc_pro multi 100.0 1.8E-65 4E-70 683.8 57.4 210 816-1054 1284-1503(1522)
17 PTZ00265 multidrug resistance 100.0 9.7E-65 2.1E-69 669.2 59.6 216 816-1054 1165-1447(1466)
18 PRK13549 xylose transporter AT 100.0 1.9E-65 4.2E-70 621.3 48.4 461 148-1057 18-492 (506)
19 PRK09700 D-allose transporter 100.0 5E-65 1.1E-69 618.7 47.9 458 148-1054 18-493 (510)
20 PRK10762 D-ribose transporter 100.0 6.6E-65 1.4E-69 615.9 48.5 451 148-1057 17-482 (501)
21 PRK10261 glutathione transport 100.0 1.3E-64 2.8E-69 625.4 51.8 488 148-1055 29-549 (623)
22 PRK15134 microcin C ABC transp 100.0 3.6E-64 7.8E-69 613.5 50.4 464 148-1054 22-510 (529)
23 PRK15439 autoinducer 2 ABC tra 100.0 3.9E-64 8.5E-69 609.5 48.6 454 148-1056 24-489 (510)
24 TIGR02633 xylG D-xylose ABC tr 100.0 8.3E-64 1.8E-68 607.0 48.8 460 148-1055 14-488 (500)
25 TIGR03269 met_CoM_red_A2 methy 100.0 9.8E-64 2.1E-68 608.8 49.3 445 148-1054 13-512 (520)
26 PRK11288 araG L-arabinose tran 100.0 1E-63 2.2E-68 605.6 47.8 453 148-1058 17-484 (501)
27 PTZ00243 ABC transporter; Prov 100.0 8.9E-63 1.9E-67 655.9 59.8 210 816-1054 1308-1528(1560)
28 TIGR01271 CFTR_protein cystic 100.0 2.6E-62 5.6E-67 651.5 63.9 209 816-1054 1217-1435(1490)
29 PRK10982 galactose/methyl gala 100.0 6.7E-63 1.5E-67 597.3 46.0 450 148-1055 11-476 (491)
30 PRK10938 putative molybdenum t 100.0 2.8E-61 6E-66 583.5 42.7 446 149-1051 17-484 (490)
31 COG4172 ABC-type uncharacteriz 100.0 3E-60 6.5E-65 514.5 44.0 471 146-1054 21-511 (534)
32 PRK11819 putative ABC transpor 100.0 2.9E-59 6.3E-64 572.2 50.0 191 840-1054 335-528 (556)
33 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.3E-58 2.9E-63 566.4 49.7 190 840-1053 333-525 (552)
34 PRK15064 ABC transporter ATP-b 100.0 1.3E-58 2.8E-63 564.8 48.5 188 839-1054 329-520 (530)
35 PRK10636 putative ABC transpor 100.0 2.9E-56 6.3E-61 551.2 46.1 186 840-1054 323-512 (638)
36 PRK13409 putative ATPase RIL; 100.0 5.9E-57 1.3E-61 549.1 38.9 197 844-1068 354-554 (590)
37 PRK11147 ABC transporter ATPas 100.0 2.1E-55 4.6E-60 545.1 51.5 191 840-1054 330-523 (635)
38 COG1129 MglA ABC-type sugar tr 100.0 2.6E-55 5.5E-60 505.3 43.8 454 146-1055 19-486 (500)
39 PLN03073 ABC transporter F fam 100.0 2.5E-53 5.3E-58 525.7 46.0 186 842-1054 522-709 (718)
40 COG0488 Uup ATPase components 100.0 1.7E-52 3.7E-57 496.0 42.1 220 147-396 15-239 (530)
41 COG3845 ABC-type uncharacteriz 100.0 1.3E-50 2.8E-55 455.2 40.6 458 147-1056 16-489 (501)
42 KOG0061 Transporter, ABC super 100.0 9.7E-52 2.1E-56 504.0 24.2 263 813-1090 22-285 (613)
43 PLN03211 ABC transporter G-25; 100.0 1.1E-46 2.4E-51 464.5 28.9 270 814-1091 37-322 (659)
44 COG1126 GlnQ ABC-type polar am 100.0 3E-46 6.5E-51 378.8 21.0 213 831-1054 4-220 (240)
45 TIGR00955 3a01204 The Eye Pigm 100.0 4.8E-46 1E-50 459.7 26.2 270 840-1116 36-312 (617)
46 KOG0927 Predicted transporter 100.0 2.1E-43 4.5E-48 397.4 30.0 202 815-1054 388-591 (614)
47 COG1126 GlnQ ABC-type polar am 100.0 1.6E-43 3.5E-48 358.9 20.2 221 147-418 14-238 (240)
48 COG1127 Ttg2A ABC-type transpo 100.0 3E-43 6.6E-48 362.4 19.4 230 831-1071 10-251 (263)
49 COG1120 FepC ABC-type cobalami 100.0 5.6E-43 1.2E-47 374.8 20.5 214 834-1056 7-225 (258)
50 COG1135 AbcC ABC-type metal io 100.0 5.1E-43 1.1E-47 372.8 18.8 204 841-1056 18-228 (339)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.5E-42 5.5E-47 367.6 22.8 208 840-1057 15-225 (254)
52 COG1131 CcmA ABC-type multidru 100.0 2.3E-42 5.1E-47 387.1 23.6 209 834-1054 9-221 (293)
53 COG1125 OpuBA ABC-type proline 100.0 8.6E-43 1.9E-47 359.7 17.5 211 833-1055 5-221 (309)
54 COG1116 TauB ABC-type nitrate/ 100.0 3.6E-42 7.7E-47 360.8 19.7 196 837-1045 11-207 (248)
55 COG1135 AbcC ABC-type metal io 100.0 6.9E-42 1.5E-46 364.2 21.6 224 146-420 17-246 (339)
56 COG1125 OpuBA ABC-type proline 100.0 7.8E-42 1.7E-46 352.6 20.0 210 147-397 13-225 (309)
57 COG3638 ABC-type phosphate/pho 100.0 4.3E-42 9.3E-47 353.0 17.7 217 834-1059 8-237 (258)
58 COG4555 NatA ABC-type Na+ tran 100.0 3.6E-42 7.8E-47 343.4 14.4 207 837-1055 9-218 (245)
59 COG1118 CysA ABC-type sulfate/ 100.0 1.2E-41 2.6E-46 361.1 18.3 210 836-1055 9-223 (345)
60 COG3839 MalK ABC-type sugar tr 100.0 2.3E-41 5E-46 375.9 20.7 217 150-417 18-235 (338)
61 COG1131 CcmA ABC-type multidru 100.0 5.2E-41 1.1E-45 376.2 23.1 212 147-401 17-230 (293)
62 COG1118 CysA ABC-type sulfate/ 100.0 3E-41 6.6E-46 358.1 19.2 223 147-418 14-240 (345)
63 COG1136 SalX ABC-type antimicr 100.0 7.5E-41 1.6E-45 351.6 22.0 193 842-1046 18-219 (226)
64 COG3839 MalK ABC-type sugar tr 100.0 5.2E-41 1.1E-45 373.1 20.0 212 833-1056 7-220 (338)
65 COG3842 PotA ABC-type spermidi 100.0 4.1E-41 8.9E-46 375.9 19.1 223 147-419 17-240 (352)
66 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.3E-40 4.9E-45 352.7 23.4 207 149-397 18-227 (254)
67 COG1127 Ttg2A ABC-type transpo 100.0 2.4E-40 5.1E-45 341.0 21.5 210 147-397 20-235 (263)
68 COG3842 PotA ABC-type spermidi 100.0 6.1E-41 1.3E-45 374.5 17.7 214 832-1056 8-223 (352)
69 COG1117 PstB ABC-type phosphat 100.0 6.2E-41 1.3E-45 338.0 15.7 207 839-1054 17-232 (253)
70 COG1120 FepC ABC-type cobalami 100.0 1.2E-40 2.6E-45 356.9 18.8 211 147-396 14-227 (258)
71 COG4555 NatA ABC-type Na+ tran 100.0 1.5E-40 3.3E-45 331.8 16.6 207 147-397 14-222 (245)
72 COG1116 TauB ABC-type nitrate/ 100.0 5.3E-40 1.1E-44 344.5 20.3 192 148-384 16-207 (248)
73 PRK13537 nodulation ABC transp 100.0 1.9E-39 4.1E-44 367.2 26.0 204 839-1054 17-222 (306)
74 COG2884 FtsE Predicted ATPase 100.0 6.8E-40 1.5E-44 324.8 18.8 199 842-1053 15-220 (223)
75 COG1117 PstB ABC-type phosphat 100.0 5E-40 1.1E-44 331.5 16.8 221 148-416 20-248 (253)
76 COG3638 ABC-type phosphate/pho 100.0 2.2E-39 4.8E-44 333.0 20.8 216 147-397 16-237 (258)
77 COG1137 YhbG ABC-type (unclass 100.0 5.7E-40 1.2E-44 327.3 15.3 214 832-1055 7-224 (243)
78 TIGR02314 ABC_MetN D-methionin 100.0 8.3E-39 1.8E-43 364.6 24.2 202 842-1055 18-226 (343)
79 cd03261 ABC_Org_Solvent_Resist 100.0 1.2E-38 2.5E-43 349.1 23.8 204 840-1054 11-221 (235)
80 PRK11650 ugpC glycerol-3-phosp 100.0 9E-39 2E-43 367.5 23.6 204 840-1055 15-220 (356)
81 PRK13536 nodulation factor exp 100.0 1.3E-38 2.8E-43 363.9 24.6 209 834-1054 46-256 (340)
82 COG1136 SalX ABC-type antimicr 100.0 8.9E-39 1.9E-43 336.0 21.2 196 147-386 17-220 (226)
83 TIGR03265 PhnT2 putative 2-ami 100.0 1.2E-38 2.7E-43 365.9 24.1 205 839-1055 14-220 (353)
84 TIGR02314 ABC_MetN D-methionin 100.0 2.9E-38 6.3E-43 360.2 26.3 206 148-396 18-229 (343)
85 PRK11432 fbpC ferric transport 100.0 1.5E-38 3.3E-43 364.5 24.0 204 840-1055 17-222 (351)
86 TIGR01188 drrA daunorubicin re 100.0 1.6E-38 3.5E-43 360.1 23.9 203 840-1054 4-208 (302)
87 TIGR03258 PhnT 2-aminoethylpho 100.0 2.3E-38 5E-43 364.1 23.8 204 840-1055 16-224 (362)
88 COG1124 DppF ABC-type dipeptid 100.0 8.1E-39 1.8E-43 331.9 17.7 200 843-1056 21-228 (252)
89 cd03259 ABC_Carb_Solutes_like 100.0 3E-38 6.4E-43 340.6 22.5 201 840-1052 11-213 (213)
90 PRK10851 sulfate/thiosulfate t 100.0 3.8E-38 8.3E-43 361.9 24.2 208 839-1055 12-222 (353)
91 TIGR01186 proV glycine betaine 100.0 4.5E-38 9.8E-43 360.4 24.6 205 839-1055 3-215 (363)
92 PRK11650 ugpC glycerol-3-phosp 100.0 3.6E-38 7.7E-43 362.5 23.8 206 148-396 17-223 (356)
93 TIGR01288 nodI ATP-binding ABC 100.0 4.3E-38 9.3E-43 356.7 23.9 204 839-1054 14-219 (303)
94 cd03293 ABC_NrtD_SsuB_transpor 100.0 6.4E-38 1.4E-42 339.7 23.9 200 842-1054 17-218 (220)
95 COG0411 LivG ABC-type branched 100.0 2.5E-38 5.3E-43 328.7 19.6 216 832-1056 7-236 (250)
96 PRK11432 fbpC ferric transport 100.0 5E-38 1.1E-42 360.3 23.9 206 148-396 19-225 (351)
97 TIGR01257 rim_protein retinal- 100.0 5.3E-36 1.1E-40 394.6 46.1 201 841-1054 942-1144(2272)
98 COG1122 CbiO ABC-type cobalt t 100.0 3.4E-38 7.3E-43 338.8 20.9 201 842-1054 17-223 (235)
99 cd03269 ABC_putative_ATPase Th 100.0 6.3E-38 1.4E-42 337.3 22.9 200 840-1052 11-210 (210)
100 PRK13537 nodulation ABC transp 100.0 1.2E-37 2.5E-42 352.7 26.2 206 148-397 20-227 (306)
101 cd03265 ABC_DrrA DrrA is the A 100.0 6.7E-38 1.4E-42 339.5 23.2 204 839-1054 10-216 (220)
102 TIGR03265 PhnT2 putative 2-ami 100.0 6E-38 1.3E-42 360.2 24.1 206 148-396 17-223 (353)
103 PRK09452 potA putrescine/sperm 100.0 6.2E-38 1.3E-42 361.7 24.2 204 840-1055 25-230 (375)
104 TIGR03258 PhnT 2-aminoethylpho 100.0 6E-38 1.3E-42 360.7 23.9 207 148-396 18-227 (362)
105 COG1124 DppF ABC-type dipeptid 100.0 6.1E-38 1.3E-42 325.3 21.2 205 149-397 21-231 (252)
106 TIGR00960 3a0501s02 Type II (G 100.0 5.1E-38 1.1E-42 339.5 21.5 194 842-1047 16-215 (216)
107 TIGR01186 proV glycine betaine 100.0 9.3E-38 2E-42 357.8 24.8 206 148-396 6-218 (363)
108 COG2884 FtsE Predicted ATPase 100.0 6.9E-38 1.5E-42 310.5 20.1 200 148-391 15-220 (223)
109 TIGR03522 GldA_ABC_ATP gliding 100.0 9.5E-38 2.1E-42 353.4 23.8 204 838-1054 11-216 (301)
110 cd03219 ABC_Mj1267_LivG_branch 100.0 1.3E-37 2.8E-42 341.2 23.6 206 840-1054 11-227 (236)
111 PRK09452 potA putrescine/sperm 100.0 1.1E-37 2.5E-42 359.5 24.0 218 148-416 27-245 (375)
112 cd03218 ABC_YhbG The ABC trans 100.0 1.2E-37 2.5E-42 340.6 22.9 204 839-1054 10-217 (232)
113 PRK09536 btuD corrinoid ABC tr 100.0 9.4E-38 2E-42 362.0 23.4 209 838-1055 12-224 (402)
114 COG3840 ThiQ ABC-type thiamine 100.0 3.3E-38 7.1E-43 309.8 16.5 196 847-1054 17-214 (231)
115 cd03301 ABC_MalK_N The N-termi 100.0 1.3E-37 2.8E-42 335.6 22.9 201 840-1052 11-213 (213)
116 PRK11607 potG putrescine trans 100.0 1.3E-37 2.8E-42 359.7 24.4 204 840-1055 30-235 (377)
117 PRK11000 maltose/maltodextrin 100.0 1.2E-37 2.6E-42 360.6 24.1 205 839-1055 13-219 (369)
118 COG4152 ABC-type uncharacteriz 100.0 3.8E-38 8.2E-43 323.2 17.4 212 831-1055 4-215 (300)
119 PRK11153 metN DL-methionine tr 100.0 1.4E-37 3.1E-42 357.2 24.4 203 841-1055 17-226 (343)
120 cd03266 ABC_NatA_sodium_export 100.0 1.1E-37 2.4E-42 337.4 22.0 198 843-1052 19-218 (218)
121 cd03296 ABC_CysA_sulfate_impor 100.0 1.9E-37 4.1E-42 340.3 23.8 206 840-1054 13-221 (239)
122 cd03268 ABC_BcrA_bacitracin_re 100.0 1.3E-37 2.8E-42 334.3 21.7 197 840-1052 11-208 (208)
123 cd03226 ABC_cobalt_CbiO_domain 100.0 9.9E-38 2.2E-42 334.4 20.7 192 842-1049 13-205 (205)
124 COG0410 LivF ABC-type branched 100.0 7.8E-38 1.7E-42 322.5 19.0 212 832-1056 6-223 (237)
125 COG1122 CbiO ABC-type cobalt t 100.0 1.9E-37 4.1E-42 332.9 22.7 207 148-397 17-228 (235)
126 cd03260 ABC_PstB_phosphate_tra 100.0 1.6E-37 3.4E-42 338.3 22.4 204 840-1054 11-224 (227)
127 COG3840 ThiQ ABC-type thiamine 100.0 8.7E-38 1.9E-42 306.8 18.1 201 153-396 17-218 (231)
128 KOG0058 Peptide exporter, ABC 100.0 5.6E-38 1.2E-42 368.0 19.9 213 143-397 476-691 (716)
129 KOG0062 ATPase component of AB 100.0 1.3E-37 2.8E-42 348.9 21.9 186 843-1053 378-563 (582)
130 COG2274 SunT ABC-type bacterio 100.0 9.5E-38 2.1E-42 381.9 22.0 256 61-397 436-696 (709)
131 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.8E-37 4E-42 335.8 21.7 193 842-1047 17-217 (218)
132 cd03258 ABC_MetN_methionine_tr 100.0 2.6E-37 5.6E-42 338.1 22.6 200 843-1054 19-225 (233)
133 cd03256 ABC_PhnC_transporter A 100.0 2.4E-37 5.2E-42 340.2 22.4 204 842-1054 14-229 (241)
134 PRK11629 lolD lipoprotein tran 100.0 5.9E-37 1.3E-41 335.0 24.8 200 842-1054 22-229 (233)
135 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.7E-37 8.1E-42 343.3 23.6 209 834-1054 29-245 (269)
136 PRK09493 glnQ glutamine ABC tr 100.0 4.5E-37 9.8E-42 337.6 23.6 204 840-1054 12-220 (240)
137 PRK13637 cbiO cobalt transport 100.0 4.2E-37 9.1E-42 345.7 23.6 201 842-1054 20-229 (287)
138 PRK10851 sulfate/thiosulfate t 100.0 4.6E-37 9.9E-42 353.0 24.3 210 148-396 15-225 (353)
139 TIGR01188 drrA daunorubicin re 100.0 3.1E-37 6.6E-42 349.6 22.5 206 148-397 6-213 (302)
140 cd03263 ABC_subfamily_A The AB 100.0 3.8E-37 8.3E-42 333.7 22.3 200 842-1054 15-216 (220)
141 PRK11248 tauB taurine transpor 100.0 5.5E-37 1.2E-41 339.0 23.7 202 840-1054 12-215 (255)
142 cd03261 ABC_Org_Solvent_Resist 100.0 6.1E-37 1.3E-41 335.5 23.9 206 148-395 13-224 (235)
143 cd03224 ABC_TM1139_LivF_branch 100.0 3.9E-37 8.5E-42 334.2 22.0 201 840-1054 11-216 (222)
144 TIGR02673 FtsE cell division A 100.0 3.4E-37 7.4E-42 332.7 21.4 194 841-1045 14-213 (214)
145 PRK11153 metN DL-methionine tr 100.0 9.5E-37 2.1E-41 350.4 26.3 206 148-396 18-229 (343)
146 PRK11607 potG putrescine trans 100.0 5.3E-37 1.1E-41 354.7 24.2 206 148-396 32-238 (377)
147 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.4E-37 1.2E-41 337.4 23.0 201 842-1054 14-220 (242)
148 PRK11264 putative amino-acid A 100.0 5.8E-37 1.3E-41 338.9 23.4 204 840-1054 14-228 (250)
149 COG0411 LivG ABC-type branched 100.0 1.9E-37 4.1E-42 322.1 17.7 221 146-397 15-239 (250)
150 cd03234 ABCG_White The White s 100.0 1.2E-36 2.6E-41 331.0 25.0 206 841-1052 19-226 (226)
151 COG0410 LivF ABC-type branched 100.0 5.4E-37 1.2E-41 316.3 20.8 205 148-396 16-225 (237)
152 PRK11831 putative ABC transpor 100.0 8.6E-37 1.9E-41 340.6 24.2 204 840-1054 18-228 (269)
153 cd03235 ABC_Metallic_Cations A 100.0 4.6E-37 1E-41 331.3 20.9 201 840-1052 10-213 (213)
154 cd03292 ABC_FtsE_transporter F 100.0 6.2E-37 1.3E-41 330.7 21.8 194 842-1047 14-213 (214)
155 TIGR02315 ABC_phnC phosphonate 100.0 4.2E-37 9E-42 338.7 20.9 206 841-1055 14-231 (243)
156 PRK11000 maltose/maltodextrin 100.0 9E-37 2E-41 353.3 24.3 206 148-396 16-222 (369)
157 PRK13536 nodulation factor exp 100.0 1.1E-36 2.3E-41 348.2 24.5 206 148-397 54-261 (340)
158 cd03264 ABC_drug_resistance_li 100.0 6.9E-37 1.5E-41 329.5 21.6 199 840-1052 11-211 (211)
159 cd03225 ABC_cobalt_CbiO_domain 100.0 6E-37 1.3E-41 330.0 21.0 193 842-1045 14-210 (211)
160 COG4559 ABC-type hemin transpo 100.0 4.4E-37 9.6E-42 309.4 18.5 207 840-1056 12-227 (259)
161 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.3E-36 2.9E-41 332.9 24.0 202 840-1054 12-216 (236)
162 COG2274 SunT ABC-type bacterio 100.0 7.3E-36 1.6E-40 365.4 32.9 214 813-1054 468-691 (709)
163 PRK10908 cell division protein 100.0 9.7E-37 2.1E-41 330.9 22.6 197 841-1049 14-216 (222)
164 COG1137 YhbG ABC-type (unclass 100.0 8.9E-38 1.9E-42 311.7 13.0 209 147-397 16-228 (243)
165 PRK10895 lipopolysaccharide AB 100.0 1.1E-36 2.3E-41 334.9 22.8 204 840-1054 14-221 (241)
166 PRK13647 cbiO cobalt transport 100.0 1E-36 2.3E-41 340.4 22.9 201 842-1054 18-222 (274)
167 PRK13634 cbiO cobalt transport 100.0 1E-36 2.2E-41 343.2 22.5 201 842-1054 20-230 (290)
168 PRK13651 cobalt transporter AT 100.0 1.1E-36 2.3E-41 344.0 22.6 202 842-1055 20-250 (305)
169 TIGR03740 galliderm_ABC gallid 100.0 2E-36 4.4E-41 328.7 23.9 199 840-1055 11-209 (223)
170 cd03262 ABC_HisP_GlnQ_permease 100.0 9.8E-37 2.1E-41 328.9 21.3 197 840-1047 11-212 (213)
171 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-36 2.9E-41 331.4 22.4 200 843-1052 19-228 (228)
172 PRK10619 histidine/lysine/argi 100.0 2.4E-36 5.3E-41 335.1 24.5 203 840-1054 16-236 (257)
173 TIGR02211 LolD_lipo_ex lipopro 100.0 1.9E-36 4.2E-41 328.5 23.0 195 842-1049 18-220 (221)
174 KOG0058 Peptide exporter, ABC 100.0 1.6E-37 3.6E-42 364.1 15.7 216 814-1054 463-686 (716)
175 COG4988 CydD ABC-type transpor 100.0 3.2E-35 7E-40 339.2 34.0 214 813-1055 317-539 (559)
176 PRK11300 livG leucine/isoleuci 100.0 1.9E-36 4.2E-41 335.8 23.0 207 840-1055 16-239 (255)
177 PRK11247 ssuB aliphatic sulfon 100.0 1.7E-36 3.6E-41 334.7 22.2 195 840-1054 23-218 (257)
178 PRK13641 cbiO cobalt transport 100.0 2E-36 4.2E-41 340.5 23.1 201 842-1054 20-229 (287)
179 TIGR00972 3a0107s01c2 phosphat 100.0 2.5E-36 5.5E-41 333.0 23.6 204 840-1054 12-227 (247)
180 cd03259 ABC_Carb_Solutes_like 100.0 2E-36 4.4E-41 326.4 22.0 200 148-390 13-213 (213)
181 PRK13646 cbiO cobalt transport 100.0 1.8E-36 3.9E-41 340.7 22.3 200 842-1054 20-230 (286)
182 PRK13636 cbiO cobalt transport 100.0 2.3E-36 5E-41 339.2 23.0 203 841-1055 18-227 (283)
183 PRK13643 cbiO cobalt transport 100.0 2.3E-36 5E-41 339.9 22.9 201 842-1055 19-229 (288)
184 PRK10070 glycine betaine trans 100.0 2.5E-36 5.5E-41 349.8 23.8 204 839-1054 38-249 (400)
185 PRK13631 cbiO cobalt transport 100.0 2.2E-36 4.8E-41 343.4 22.8 218 816-1054 21-260 (320)
186 cd03265 ABC_DrrA DrrA is the A 100.0 2.5E-36 5.5E-41 327.2 22.1 204 148-394 13-218 (220)
187 PRK13637 cbiO cobalt transport 100.0 3.4E-36 7.5E-41 338.3 23.8 218 148-408 20-248 (287)
188 PRK11124 artP arginine transpo 100.0 3.4E-36 7.4E-41 331.1 23.1 203 840-1054 13-225 (242)
189 PRK13643 cbiO cobalt transport 100.0 6.7E-36 1.5E-40 336.1 26.0 224 149-416 20-255 (288)
190 TIGR01288 nodI ATP-binding ABC 100.0 3.6E-36 7.8E-41 341.0 23.7 206 148-397 17-224 (303)
191 KOG0057 Mitochondrial Fe/S clu 100.0 2.1E-36 4.5E-41 342.7 21.6 229 93-397 343-574 (591)
192 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.3E-36 1.1E-40 334.0 24.7 207 147-396 36-249 (269)
193 PRK11614 livF leucine/isoleuci 100.0 2.6E-36 5.6E-41 331.0 21.8 202 840-1055 16-222 (237)
194 TIGR03005 ectoine_ehuA ectoine 100.0 4.5E-36 9.7E-41 332.1 23.7 204 840-1054 11-231 (252)
195 TIGR01978 sufC FeS assembly AT 100.0 4.7E-36 1E-40 330.4 23.7 209 840-1054 11-229 (243)
196 PRK14268 phosphate ABC transpo 100.0 7.7E-36 1.7E-40 331.2 25.6 207 840-1054 23-237 (258)
197 PRK13548 hmuV hemin importer A 100.0 4E-36 8.6E-41 333.1 23.1 203 840-1054 13-225 (258)
198 TIGR03415 ABC_choXWV_ATP choli 100.0 4.5E-36 9.7E-41 345.2 24.3 205 839-1055 34-250 (382)
199 TIGR03411 urea_trans_UrtD urea 100.0 4.9E-36 1.1E-40 329.9 23.5 205 840-1054 13-226 (242)
200 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.3E-36 7.2E-41 324.2 21.4 194 847-1052 16-211 (211)
201 PRK14247 phosphate ABC transpo 100.0 5.9E-36 1.3E-40 330.8 24.0 210 840-1054 14-229 (250)
202 PRK13650 cbiO cobalt transport 100.0 4E-36 8.8E-41 336.6 22.9 200 842-1054 20-224 (279)
203 PRK15079 oligopeptide ABC tran 100.0 5.1E-36 1.1E-40 341.7 24.0 205 841-1055 33-247 (331)
204 cd03219 ABC_Mj1267_LivG_branch 100.0 5.6E-36 1.2E-40 328.2 23.3 214 148-395 13-230 (236)
205 cd03296 ABC_CysA_sulfate_impor 100.0 6.5E-36 1.4E-40 328.1 23.7 209 148-395 15-224 (239)
206 PRK11231 fecE iron-dicitrate t 100.0 4.1E-36 8.9E-41 332.9 22.3 208 839-1055 12-223 (255)
207 PRK13650 cbiO cobalt transport 100.0 1E-35 2.3E-40 333.2 25.8 205 148-396 20-228 (279)
208 PRK10575 iron-hydroxamate tran 100.0 4.3E-36 9.3E-41 334.4 22.5 207 840-1055 22-233 (265)
209 PRK13644 cbiO cobalt transport 100.0 4.8E-36 1.1E-40 335.1 23.0 201 842-1055 15-220 (274)
210 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.8E-36 1E-40 324.7 22.1 195 148-386 17-218 (218)
211 PRK14267 phosphate ABC transpo 100.0 6.6E-36 1.4E-40 331.0 23.5 210 840-1054 15-232 (253)
212 cd03218 ABC_YhbG The ABC trans 100.0 6.8E-36 1.5E-40 326.7 23.1 204 148-395 13-220 (232)
213 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.6E-36 1.6E-40 323.5 23.3 200 148-392 17-218 (220)
214 PRK13635 cbiO cobalt transport 100.0 5.3E-36 1.2E-40 335.4 22.7 200 842-1054 20-224 (279)
215 cd03258 ABC_MetN_methionine_tr 100.0 6.3E-36 1.4E-40 327.1 22.7 204 149-395 19-228 (233)
216 COG4525 TauB ABC-type taurine 100.0 2.5E-36 5.4E-41 299.4 17.6 201 842-1055 18-220 (259)
217 PRK11629 lolD lipoprotein tran 100.0 1.6E-35 3.4E-40 323.8 25.8 201 148-392 22-229 (233)
218 TIGR03410 urea_trans_UrtE urea 100.0 5.4E-36 1.2E-40 327.0 22.0 202 840-1056 11-218 (230)
219 TIGR03522 GldA_ABC_ATP gliding 100.0 5.6E-36 1.2E-40 338.9 22.8 205 148-397 15-221 (301)
220 PRK13638 cbiO cobalt transport 100.0 5.1E-36 1.1E-40 334.9 22.1 203 840-1054 12-220 (271)
221 cd03301 ABC_MalK_N The N-termi 100.0 7.6E-36 1.6E-40 321.9 22.6 199 149-390 14-213 (213)
222 PRK10584 putative ABC transpor 100.0 1.1E-35 2.4E-40 324.0 24.0 196 842-1050 23-226 (228)
223 TIGR03608 L_ocin_972_ABC putat 100.0 6.8E-36 1.5E-40 320.6 21.8 191 840-1042 9-206 (206)
224 PRK13649 cbiO cobalt transport 100.0 8.1E-36 1.8E-40 335.0 23.4 200 842-1054 20-229 (280)
225 PRK14241 phosphate transporter 100.0 1.1E-35 2.3E-40 330.2 24.1 206 840-1054 15-237 (258)
226 PRK13652 cbiO cobalt transport 100.0 8.3E-36 1.8E-40 333.9 23.4 201 842-1054 17-222 (277)
227 COG4559 ABC-type hemin transpo 100.0 4.4E-36 9.4E-41 302.2 18.8 206 149-396 15-229 (259)
228 TIGR00960 3a0501s02 Type II (G 100.0 4E-36 8.6E-41 324.8 20.1 195 148-386 16-216 (216)
229 PRK09984 phosphonate/organopho 100.0 6.9E-36 1.5E-40 332.4 22.6 209 840-1055 15-238 (262)
230 PRK13634 cbiO cobalt transport 100.0 6.7E-36 1.4E-40 336.5 22.6 206 148-396 20-234 (290)
231 cd03266 ABC_NatA_sodium_export 100.0 8.3E-36 1.8E-40 322.8 22.4 198 149-390 19-218 (218)
232 PRK10253 iron-enterobactin tra 100.0 6.4E-36 1.4E-40 333.0 22.1 207 840-1055 18-229 (265)
233 COG4181 Predicted ABC-type tra 100.0 3.2E-36 7E-41 292.6 17.0 200 838-1050 19-226 (228)
234 PRK14273 phosphate ABC transpo 100.0 8.7E-36 1.9E-40 330.2 22.8 203 841-1054 19-233 (254)
235 KOG0066 eIF2-interacting prote 100.0 5.3E-35 1.1E-39 318.2 28.3 210 814-1063 584-795 (807)
236 PRK10070 glycine betaine trans 100.0 1.1E-35 2.4E-40 344.5 24.6 206 148-396 41-253 (400)
237 TIGR03873 F420-0_ABC_ATP propo 100.0 8.2E-36 1.8E-40 330.7 22.3 207 840-1055 12-222 (256)
238 PRK14245 phosphate ABC transpo 100.0 1.4E-35 3.1E-40 327.6 24.1 208 840-1054 14-229 (250)
239 cd03263 ABC_subfamily_A The AB 100.0 7.1E-36 1.5E-40 323.8 21.3 203 148-395 15-219 (220)
240 cd03267 ABC_NatA_like Similar 100.0 1.5E-35 3.2E-40 324.3 23.8 202 839-1052 31-236 (236)
241 cd03269 ABC_putative_ATPase Th 100.0 8.1E-36 1.8E-40 320.9 21.4 198 148-390 13-210 (210)
242 TIGR01184 ntrCD nitrate transp 100.0 8.1E-36 1.8E-40 325.1 21.5 198 845-1054 1-199 (230)
243 cd03260 ABC_PstB_phosphate_tra 100.0 8.6E-36 1.9E-40 324.7 21.7 203 149-394 14-226 (227)
244 COG4988 CydD ABC-type transpor 100.0 6.5E-36 1.4E-40 345.0 21.7 200 149-397 335-543 (559)
245 cd03232 ABC_PDR_domain2 The pl 100.0 9.6E-36 2.1E-40 315.3 21.4 173 842-1052 20-192 (192)
246 cd03224 ABC_TM1139_LivF_branch 100.0 1.1E-35 2.3E-40 322.9 22.3 202 148-395 13-219 (222)
247 PRK11831 putative ABC transpor 100.0 3.1E-35 6.6E-40 328.1 26.4 207 148-396 20-232 (269)
248 PRK14269 phosphate ABC transpo 100.0 1.4E-35 3.1E-40 326.8 23.3 210 839-1054 12-225 (246)
249 PRK09473 oppD oligopeptide tra 100.0 2.5E-35 5.5E-40 336.2 26.0 213 148-396 29-250 (330)
250 cd03233 ABC_PDR_domain1 The pl 100.0 2.2E-35 4.7E-40 315.0 23.8 196 816-1052 3-202 (202)
251 PRK13651 cobalt transporter AT 100.0 1.5E-35 3.2E-40 334.8 23.7 205 148-396 20-253 (305)
252 cd03256 ABC_PhnC_transporter A 100.0 1.3E-35 2.9E-40 326.4 22.8 213 148-395 14-232 (241)
253 TIGR03415 ABC_choXWV_ATP choli 100.0 1.6E-35 3.4E-40 340.8 24.2 208 146-396 35-253 (382)
254 PRK11022 dppD dipeptide transp 100.0 1.9E-35 4.2E-40 336.9 24.8 207 842-1054 20-238 (326)
255 PRK13631 cbiO cobalt transport 100.0 2.6E-35 5.5E-40 334.7 25.7 216 148-408 39-279 (320)
256 PRK13549 xylose transporter AT 100.0 1E-35 2.2E-40 361.5 23.8 211 840-1057 16-230 (506)
257 TIGR02142 modC_ABC molybdenum 100.0 1.4E-35 3E-40 342.5 23.4 194 847-1054 15-216 (354)
258 PRK11308 dppF dipeptide transp 100.0 1.8E-35 3.8E-40 337.1 23.9 204 841-1055 27-240 (327)
259 cd03300 ABC_PotA_N PotA is an 100.0 1.9E-35 4.2E-40 322.8 23.3 203 840-1054 11-215 (232)
260 TIGR02769 nickel_nikE nickel i 100.0 1.6E-35 3.5E-40 329.8 23.0 203 841-1054 23-235 (265)
261 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.8E-35 3.8E-40 325.3 23.0 206 148-396 14-224 (242)
262 PRK13639 cbiO cobalt transport 100.0 1.7E-35 3.7E-40 331.0 23.3 202 842-1055 15-222 (275)
263 PRK14242 phosphate transporter 100.0 2.1E-35 4.6E-40 327.0 23.7 219 816-1054 6-232 (253)
264 PRK13647 cbiO cobalt transport 100.0 2.2E-35 4.8E-40 329.7 24.0 203 149-395 19-225 (274)
265 TIGR00968 3a0106s01 sulfate AB 100.0 2E-35 4.4E-40 323.6 23.2 203 840-1054 11-215 (237)
266 PRK10744 pstB phosphate transp 100.0 3E-35 6.6E-40 326.8 24.9 215 816-1054 13-239 (260)
267 COG4175 ProV ABC-type proline/ 100.0 4.2E-36 9.1E-41 318.7 17.0 204 841-1056 40-251 (386)
268 TIGR01277 thiQ thiamine ABC tr 100.0 1.9E-35 4.1E-40 318.6 22.5 198 844-1053 13-212 (213)
269 cd03268 ABC_BcrA_bacitracin_re 100.0 1.4E-35 3.1E-40 318.5 21.4 195 148-390 13-208 (208)
270 cd03226 ABC_cobalt_CbiO_domain 100.0 1.1E-35 2.4E-40 318.5 20.5 192 148-387 13-205 (205)
271 cd03297 ABC_ModC_molybdenum_tr 100.0 1.8E-35 3.8E-40 319.2 22.1 198 838-1052 9-214 (214)
272 TIGR02315 ABC_phnC phosphonate 100.0 1.3E-35 2.8E-40 326.8 21.4 213 148-395 15-233 (243)
273 PRK13646 cbiO cobalt transport 100.0 2.9E-35 6.4E-40 330.8 24.7 205 148-396 20-234 (286)
274 PRK14256 phosphate ABC transpo 100.0 4.4E-35 9.6E-40 324.1 25.6 209 840-1054 15-231 (252)
275 COG4175 ProV ABC-type proline/ 100.0 5.3E-36 1.1E-40 317.9 17.3 222 147-419 40-268 (386)
276 cd03233 ABC_PDR_domain1 The pl 100.0 2.7E-35 5.9E-40 314.3 23.1 183 146-390 18-202 (202)
277 PRK13635 cbiO cobalt transport 100.0 3.2E-35 6.8E-40 329.2 24.6 215 149-407 21-242 (279)
278 PRK13547 hmuV hemin importer A 100.0 1.7E-35 3.6E-40 329.4 22.2 210 839-1055 11-240 (272)
279 PRK14235 phosphate transporter 100.0 2.9E-35 6.2E-40 328.0 24.1 220 816-1054 19-246 (267)
280 PRK14250 phosphate ABC transpo 100.0 1.5E-35 3.3E-40 325.4 21.5 198 840-1054 14-216 (241)
281 PRK13645 cbiO cobalt transport 100.0 1.7E-35 3.6E-40 333.7 22.3 200 843-1054 25-235 (289)
282 cd03299 ABC_ModC_like Archeal 100.0 2.7E-35 5.9E-40 322.1 23.3 199 844-1054 14-214 (235)
283 PRK00349 uvrA excinuclease ABC 100.0 6.2E-34 1.3E-38 357.1 38.7 123 916-1054 791-922 (943)
284 PRK15079 oligopeptide ABC tran 100.0 2.6E-35 5.7E-40 335.9 23.8 209 147-396 33-250 (331)
285 PRK09473 oppD oligopeptide tra 100.0 2.8E-35 6.1E-40 335.8 24.1 209 841-1055 28-247 (330)
286 PRK09536 btuD corrinoid ABC tr 100.0 2.6E-35 5.6E-40 341.6 23.9 209 148-396 16-227 (402)
287 PRK11144 modC molybdate transp 100.0 2.1E-35 4.6E-40 340.5 23.0 191 847-1055 16-214 (352)
288 PRK09493 glnQ glutamine ABC tr 100.0 2.9E-35 6.3E-40 323.3 23.0 205 148-396 14-224 (240)
289 PRK13632 cbiO cobalt transport 100.0 2.4E-35 5.1E-40 329.3 22.4 201 841-1054 21-226 (271)
290 PRK15112 antimicrobial peptide 100.0 2.3E-35 5.1E-40 328.7 22.2 202 842-1054 26-234 (267)
291 PRK13633 cobalt transporter AT 100.0 2.3E-35 5.1E-40 330.8 22.3 201 842-1055 23-229 (280)
292 PRK14237 phosphate transporter 100.0 7.3E-35 1.6E-39 324.7 26.1 220 815-1054 19-246 (267)
293 cd03234 ABCG_White The White s 100.0 2.3E-35 5E-40 321.0 21.5 205 148-390 20-226 (226)
294 PRK11022 dppD dipeptide transp 100.0 6.4E-35 1.4E-39 332.7 26.1 213 148-396 20-242 (326)
295 PRK15093 antimicrobial peptide 100.0 3.6E-35 7.9E-40 335.8 24.1 210 841-1054 19-243 (330)
296 PRK13648 cbiO cobalt transport 100.0 2.8E-35 6.1E-40 328.5 22.7 201 842-1055 22-227 (269)
297 cd03257 ABC_NikE_OppD_transpor 100.0 6.3E-35 1.4E-39 318.2 24.8 201 149-390 19-228 (228)
298 COG1245 Predicted ATPase, RNas 100.0 1.7E-34 3.7E-39 318.5 28.1 170 848-1043 360-530 (591)
299 PRK14259 phosphate ABC transpo 100.0 3.2E-35 6.9E-40 327.8 22.7 218 816-1054 13-248 (269)
300 TIGR02211 LolD_lipo_ex lipopro 100.0 5.7E-35 1.2E-39 317.0 23.9 196 148-387 18-220 (221)
301 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.3E-35 1.2E-39 320.3 23.7 206 148-397 14-221 (236)
302 PRK11174 cysteine/glutathione 100.0 2.3E-35 5E-40 365.7 23.5 206 149-397 364-572 (588)
303 PRK11264 putative amino-acid A 100.0 4.4E-35 9.6E-40 323.9 23.1 205 149-396 17-232 (250)
304 PRK13640 cbiO cobalt transport 100.0 3.5E-35 7.5E-40 329.6 22.5 202 842-1054 20-227 (282)
305 cd03213 ABCG_EPDR ABCG transpo 100.0 3.4E-35 7.3E-40 311.5 21.1 171 842-1052 22-194 (194)
306 PRK14270 phosphate ABC transpo 100.0 5.1E-35 1.1E-39 323.4 23.4 207 840-1054 15-230 (251)
307 cd03264 ABC_drug_resistance_li 100.0 2.6E-35 5.7E-40 317.2 20.5 196 149-390 14-211 (211)
308 PRK14244 phosphate ABC transpo 100.0 5.1E-35 1.1E-39 323.5 23.3 209 840-1054 16-232 (251)
309 PRK10771 thiQ thiamine transpo 100.0 3.3E-35 7.1E-40 321.1 21.3 196 847-1054 17-214 (232)
310 PRK14274 phosphate ABC transpo 100.0 5.8E-35 1.3E-39 324.5 23.6 208 840-1054 23-238 (259)
311 PRK11308 dppF dipeptide transp 100.0 1.2E-34 2.5E-39 330.4 26.6 207 148-396 28-243 (327)
312 PRK13632 cbiO cobalt transport 100.0 6.6E-35 1.4E-39 325.8 24.2 205 148-396 22-230 (271)
313 PRK10762 D-ribose transporter 100.0 3.7E-35 7.9E-40 356.1 23.8 210 839-1057 14-228 (501)
314 cd03267 ABC_NatA_like Similar 100.0 6.9E-35 1.5E-39 319.0 23.7 202 146-390 32-236 (236)
315 COG0444 DppD ABC-type dipeptid 100.0 9.4E-35 2E-39 315.3 24.2 215 147-396 17-242 (316)
316 TIGR02770 nickel_nikD nickel i 100.0 4.5E-35 9.8E-40 319.4 21.9 201 844-1054 1-210 (230)
317 COG4525 TauB ABC-type taurine 100.0 3.6E-35 7.9E-40 291.1 19.0 206 148-398 18-225 (259)
318 PRK14239 phosphate transporter 100.0 7.1E-35 1.5E-39 322.7 23.4 208 840-1054 16-231 (252)
319 PRK14240 phosphate transporter 100.0 8.1E-35 1.8E-39 321.7 23.6 207 841-1054 15-229 (250)
320 TIGR02982 heterocyst_DevA ABC 100.0 8.1E-35 1.8E-39 315.3 22.8 195 842-1048 18-219 (220)
321 PRK09700 D-allose transporter 100.0 4.7E-35 1E-39 356.2 23.5 209 839-1056 15-231 (510)
322 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 9.9E-35 2.2E-39 315.1 23.3 200 832-1052 25-224 (224)
323 COG4604 CeuD ABC-type enteroch 100.0 4.9E-36 1.1E-40 298.1 11.9 215 832-1056 4-222 (252)
324 TIGR02673 FtsE cell division A 100.0 5.1E-35 1.1E-39 315.7 20.9 194 148-385 15-214 (214)
325 PRK10895 lipopolysaccharide AB 100.0 8.2E-35 1.8E-39 319.9 22.9 206 148-396 16-225 (241)
326 PRK11144 modC molybdate transp 100.0 5.7E-35 1.2E-39 336.8 22.6 195 153-396 16-217 (352)
327 cd03292 ABC_FtsE_transporter F 100.0 4.8E-35 1E-39 315.9 20.6 195 148-386 14-214 (214)
328 COG0444 DppD ABC-type dipeptid 100.0 1.1E-34 2.4E-39 314.7 23.4 210 841-1055 17-239 (316)
329 PRK14257 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 329.6 25.4 221 816-1054 80-308 (329)
330 PRK00635 excinuclease ABC subu 100.0 3.3E-33 7.2E-38 362.7 41.4 135 913-1055 759-902 (1809)
331 PRK14260 phosphate ABC transpo 100.0 9E-35 1.9E-39 322.8 23.2 209 840-1054 18-238 (259)
332 PRK13642 cbiO cobalt transport 100.0 1.2E-34 2.5E-39 324.7 24.2 200 842-1054 20-224 (277)
333 PRK14263 phosphate ABC transpo 100.0 1.1E-34 2.4E-39 321.8 23.8 208 839-1054 18-240 (261)
334 TIGR00972 3a0107s01c2 phosphat 100.0 1.1E-34 2.4E-39 319.9 23.8 206 149-396 15-231 (247)
335 PRK13641 cbiO cobalt transport 100.0 5.9E-35 1.3E-39 328.5 21.9 205 148-396 20-233 (287)
336 PRK11248 tauB taurine transpor 100.0 1E-34 2.2E-39 320.9 23.5 200 148-392 14-215 (255)
337 PRK14253 phosphate ABC transpo 100.0 9.6E-35 2.1E-39 321.0 23.2 208 840-1054 14-228 (249)
338 PRK14273 phosphate ABC transpo 100.0 2.1E-34 4.5E-39 319.2 25.8 206 149-396 21-237 (254)
339 PRK13648 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 322.7 24.9 204 149-396 23-230 (269)
340 TIGR03410 urea_trans_UrtE urea 100.0 8E-35 1.7E-39 317.7 22.1 202 148-395 13-219 (230)
341 PRK13543 cytochrome c biogenes 100.0 6.9E-35 1.5E-39 314.3 21.2 190 840-1043 22-211 (214)
342 cd03231 ABC_CcmA_heme_exporter 100.0 4.9E-35 1.1E-39 312.3 19.7 186 840-1042 11-198 (201)
343 PRK10584 putative ABC transpor 100.0 2.1E-34 4.6E-39 314.0 25.1 198 148-389 23-227 (228)
344 PRK13636 cbiO cobalt transport 100.0 8.4E-35 1.8E-39 326.6 22.4 206 149-397 20-231 (283)
345 PRK11701 phnK phosphonate C-P 100.0 1.2E-34 2.6E-39 321.7 23.4 203 841-1054 18-236 (258)
346 PRK13538 cytochrome c biogenes 100.0 5.6E-35 1.2E-39 312.7 20.0 189 840-1042 12-202 (204)
347 PRK14262 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 319.6 24.0 208 840-1054 14-229 (250)
348 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.1E-33 4.6E-38 353.6 37.6 208 816-1054 451-668 (686)
349 PRK14258 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 321.3 24.0 209 841-1054 19-240 (261)
350 PRK14272 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 320.2 23.8 205 840-1054 15-231 (252)
351 PRK14257 phosphate ABC transpo 100.0 1.8E-34 4E-39 328.7 25.2 211 148-396 95-312 (329)
352 PRK14249 phosphate ABC transpo 100.0 1.3E-34 2.9E-39 320.1 23.4 208 840-1054 15-230 (251)
353 PRK11247 ssuB aliphatic sulfon 100.0 9.8E-35 2.1E-39 320.6 22.2 194 149-393 26-219 (257)
354 KOG0055 Multidrug/pheromone ex 100.0 3.8E-35 8.3E-40 362.5 21.0 214 142-397 997-1213(1228)
355 PRK13644 cbiO cobalt transport 100.0 1E-34 2.2E-39 324.4 22.3 203 149-396 16-223 (274)
356 TIGR03411 urea_trans_UrtD urea 100.0 1.5E-34 3.2E-39 318.1 23.2 211 148-395 15-229 (242)
357 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-34 2.5E-39 365.1 25.4 205 148-397 466-673 (686)
358 PRK14236 phosphate transporter 100.0 2.9E-34 6.4E-39 320.7 25.9 219 816-1054 25-251 (272)
359 KOG0057 Mitochondrial Fe/S clu 100.0 2.4E-35 5.3E-40 334.1 17.2 211 814-1054 349-569 (591)
360 PRK10418 nikD nickel transport 100.0 1.3E-34 2.8E-39 320.6 22.7 201 842-1054 16-225 (254)
361 PRK14271 phosphate ABC transpo 100.0 3.2E-34 7E-39 320.5 26.1 208 840-1054 32-246 (276)
362 TIGR02770 nickel_nikD nickel i 100.0 1.2E-34 2.6E-39 316.1 22.0 207 150-396 1-214 (230)
363 PRK11614 livF leucine/isoleuci 100.0 9.4E-35 2E-39 318.6 21.2 203 148-396 18-225 (237)
364 TIGR02142 modC_ABC molybdenum 100.0 1.5E-34 3.3E-39 333.9 24.0 199 153-396 15-220 (354)
365 TIGR03740 galliderm_ABC gallid 100.0 1.8E-34 4E-39 313.3 23.2 197 148-393 13-209 (223)
366 COG4598 HisP ABC-type histidin 100.0 2.5E-35 5.5E-40 288.0 14.6 213 831-1054 8-236 (256)
367 PRK14275 phosphate ABC transpo 100.0 1.8E-34 3.8E-39 324.3 23.8 207 840-1054 50-265 (286)
368 COG1129 MglA ABC-type sugar tr 100.0 1.3E-34 2.9E-39 334.1 23.1 227 831-1066 10-243 (500)
369 PRK13548 hmuV hemin importer A 100.0 1.8E-34 3.9E-39 319.9 23.4 206 148-396 15-229 (258)
370 PRK10908 cell division protein 100.0 1.3E-34 2.7E-39 314.4 21.7 196 148-387 15-216 (222)
371 TIGR02769 nickel_nikE nickel i 100.0 1.8E-34 3.8E-39 321.4 23.4 207 148-396 24-239 (265)
372 PRK14248 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 322.8 22.6 203 841-1054 33-247 (268)
373 PRK10619 histidine/lysine/argi 100.0 1.5E-34 3.3E-39 320.7 22.6 205 148-396 18-240 (257)
374 TIGR02633 xylG D-xylose ABC tr 100.0 1.5E-34 3.1E-39 351.3 24.4 211 839-1056 11-227 (500)
375 PRK15439 autoinducer 2 ABC tra 100.0 1.1E-34 2.4E-39 352.2 23.3 201 840-1056 22-226 (510)
376 PRK13640 cbiO cobalt transport 100.0 2.8E-34 6.1E-39 322.2 24.8 207 149-396 21-231 (282)
377 PRK14242 phosphate transporter 100.0 4.6E-34 1E-38 316.3 26.2 209 149-395 20-235 (253)
378 TIGR01184 ntrCD nitrate transp 100.0 1.4E-34 3.1E-39 315.2 21.8 201 151-394 1-201 (230)
379 TIGR03005 ectoine_ehuA ectoine 100.0 1.6E-34 3.5E-39 319.6 22.5 206 148-396 13-235 (252)
380 PRK14254 phosphate ABC transpo 100.0 2.1E-34 4.7E-39 323.2 23.6 202 840-1054 50-264 (285)
381 cd03225 ABC_cobalt_CbiO_domain 100.0 1.2E-34 2.6E-39 312.1 20.7 194 148-385 14-211 (211)
382 cd03230 ABC_DR_subfamily_A Thi 100.0 1.1E-34 2.3E-39 302.1 19.6 158 841-1045 12-171 (173)
383 PRK14251 phosphate ABC transpo 100.0 2.2E-34 4.9E-39 318.4 23.3 204 840-1054 15-230 (251)
384 PRK13649 cbiO cobalt transport 100.0 2.7E-34 5.9E-39 322.6 24.4 205 148-396 20-233 (280)
385 PRK10982 galactose/methyl gala 100.0 1.5E-34 3.2E-39 350.2 23.9 210 839-1057 8-221 (491)
386 PRK14261 phosphate ABC transpo 100.0 2.3E-34 5E-39 318.6 23.5 208 840-1054 17-232 (253)
387 PRK15093 antimicrobial peptide 100.0 4.4E-34 9.6E-39 326.9 26.3 217 148-396 20-247 (330)
388 PRK10419 nikE nickel transport 100.0 2.1E-34 4.6E-39 320.9 23.1 205 841-1056 24-238 (268)
389 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.7E-34 3.8E-39 310.8 21.6 195 153-390 16-211 (211)
390 PRK13633 cobalt transporter AT 100.0 1.8E-34 4E-39 323.6 22.6 205 148-396 23-232 (280)
391 TIGR01166 cbiO cobalt transpor 100.0 1.1E-34 2.5E-39 306.9 19.7 179 841-1029 4-188 (190)
392 PRK11300 livG leucine/isoleuci 100.0 3E-34 6.5E-39 318.3 24.0 221 148-396 18-242 (255)
393 TIGR01978 sufC FeS assembly AT 100.0 3.4E-34 7.4E-39 315.6 24.1 213 148-396 13-233 (243)
394 PRK14247 phosphate ABC transpo 100.0 3.3E-34 7.2E-39 316.9 24.1 209 148-396 16-233 (250)
395 PRK13652 cbiO cobalt transport 100.0 2.2E-34 4.8E-39 322.4 22.9 205 149-396 18-226 (277)
396 PRK10247 putative ABC transpor 100.0 1.1E-34 2.3E-39 315.3 19.8 198 840-1052 18-220 (225)
397 PRK11288 araG L-arabinose tran 100.0 1.7E-34 3.6E-39 350.4 23.7 205 840-1053 15-223 (501)
398 PRK14268 phosphate ABC transpo 100.0 2.7E-34 5.9E-39 318.8 23.3 204 149-395 26-240 (258)
399 PRK13639 cbiO cobalt transport 100.0 3.4E-34 7.3E-39 320.6 24.1 204 149-396 16-225 (275)
400 PRK14255 phosphate ABC transpo 100.0 3.5E-34 7.6E-39 317.1 23.9 208 840-1054 16-231 (252)
401 cd03235 ABC_Metallic_Cations A 100.0 1.2E-34 2.6E-39 312.6 19.6 200 148-390 12-213 (213)
402 CHL00131 ycf16 sulfate ABC tra 100.0 3.9E-34 8.5E-39 316.7 24.2 210 840-1055 18-237 (252)
403 PRK11124 artP arginine transpo 100.0 1.7E-34 3.7E-39 317.6 21.1 203 149-395 16-228 (242)
404 PRK11176 lipid transporter ATP 100.0 1.9E-34 4.2E-39 357.2 24.1 209 148-397 356-567 (582)
405 PRK15056 manganese/iron transp 100.0 2E-34 4.4E-39 322.0 21.9 206 841-1056 19-227 (272)
406 PRK14237 phosphate transporter 100.0 9.6E-34 2.1E-38 315.7 27.2 211 148-396 33-250 (267)
407 PRK10744 pstB phosphate transp 100.0 6.9E-34 1.5E-38 315.9 26.0 210 149-396 27-243 (260)
408 PRK13638 cbiO cobalt transport 100.0 3.2E-34 7E-39 320.4 23.4 204 149-396 15-224 (271)
409 TIGR00630 uvra excinuclease AB 100.0 9.4E-33 2E-37 345.9 39.1 123 916-1054 789-920 (924)
410 cd03300 ABC_PotA_N PotA is an 100.0 4.7E-34 1E-38 311.8 24.0 206 148-396 13-219 (232)
411 COG1132 MdlB ABC-type multidru 100.0 1.9E-34 4.1E-39 355.6 23.3 208 148-397 342-552 (567)
412 PRK14250 phosphate ABC transpo 100.0 3.1E-34 6.7E-39 315.0 22.5 200 149-396 17-220 (241)
413 PRK13642 cbiO cobalt transport 100.0 7.4E-34 1.6E-38 318.2 25.9 205 148-396 20-228 (277)
414 cd03299 ABC_ModC_like Archeal 100.0 4.8E-34 1E-38 312.3 23.7 204 150-396 14-218 (235)
415 PRK03695 vitamin B12-transport 100.0 3.7E-34 7.9E-39 315.5 22.9 197 844-1054 11-217 (248)
416 cd03252 ABCC_Hemolysin The ABC 100.0 1.1E-34 2.3E-39 318.3 18.5 196 842-1054 15-220 (237)
417 PRK09984 phosphonate/organopho 100.0 2.2E-34 4.8E-39 320.3 21.3 216 148-395 17-240 (262)
418 PRK10575 iron-hydroxamate tran 100.0 2.9E-34 6.4E-39 319.6 22.2 209 148-395 24-235 (265)
419 PRK14265 phosphate ABC transpo 100.0 4.1E-34 8.9E-39 319.5 23.2 218 816-1054 20-253 (274)
420 PRK10790 putative multidrug tr 100.0 4.9E-34 1.1E-38 353.9 26.1 199 149-397 355-563 (592)
421 PRK10253 iron-enterobactin tra 100.0 3.4E-34 7.4E-39 319.1 22.2 209 148-396 20-232 (265)
422 PRK13539 cytochrome c biogenes 100.0 1.7E-34 3.7E-39 309.6 19.0 188 839-1043 12-199 (207)
423 TIGR01193 bacteriocin_ABC ABC- 100.0 8.9E-33 1.9E-37 349.2 37.9 210 816-1054 473-692 (708)
424 PRK10771 thiQ thiamine transpo 100.0 4.9E-34 1.1E-38 311.8 23.0 201 153-396 17-218 (232)
425 PRK14238 phosphate transporter 100.0 3.9E-34 8.4E-39 319.4 22.6 217 817-1054 25-250 (271)
426 COG4618 ArpD ABC-type protease 100.0 2E-34 4.4E-39 323.3 20.2 236 91-399 324-562 (580)
427 cd03251 ABCC_MsbA MsbA is an e 100.0 9.9E-35 2.2E-39 317.9 17.4 200 843-1054 16-220 (234)
428 PRK14243 phosphate transporter 100.0 4E-34 8.7E-39 318.2 22.5 207 840-1054 21-243 (264)
429 PRK14267 phosphate ABC transpo 100.0 5E-34 1.1E-38 316.1 23.1 212 149-396 18-236 (253)
430 PRK15112 antimicrobial peptide 100.0 4.6E-34 1E-38 318.2 23.0 207 148-396 26-238 (267)
431 TIGR02323 CP_lyasePhnK phospho 100.0 4.1E-34 8.9E-39 316.7 22.4 204 840-1054 14-233 (253)
432 TIGR01277 thiQ thiamine ABC tr 100.0 5.7E-34 1.2E-38 307.1 22.8 199 150-391 13-212 (213)
433 PRK11231 fecE iron-dicitrate t 100.0 3.8E-34 8.3E-39 317.1 21.9 208 148-395 15-225 (255)
434 PRK14246 phosphate ABC transpo 100.0 6.5E-34 1.4E-38 314.9 23.7 209 839-1054 20-236 (257)
435 cd03262 ABC_HisP_GlnQ_permease 100.0 2E-34 4.4E-39 310.9 19.1 195 148-386 13-213 (213)
436 cd03245 ABCC_bacteriocin_expor 100.0 1.7E-34 3.6E-39 313.1 18.4 195 842-1052 17-220 (220)
437 PRK13645 cbiO cobalt transport 100.0 3.3E-34 7.3E-39 323.1 21.6 205 149-396 25-239 (289)
438 PRK11174 cysteine/glutathione 100.0 1.6E-34 3.4E-39 358.3 20.6 209 816-1054 349-567 (588)
439 TIGR03873 F420-0_ABC_ATP propo 100.0 5.3E-34 1.1E-38 316.2 22.6 208 148-395 14-224 (256)
440 TIGR00968 3a0106s01 sulfate AB 100.0 8E-34 1.7E-38 310.9 23.7 206 148-396 13-219 (237)
441 cd03229 ABC_Class3 This class 100.0 2.1E-34 4.5E-39 301.4 18.1 161 840-1045 11-177 (178)
442 PRK09580 sufC cysteine desulfu 100.0 7.2E-34 1.6E-38 313.9 23.2 209 840-1054 12-230 (248)
443 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.7E-34 5.8E-39 363.4 22.6 206 148-397 492-700 (710)
444 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.1E-32 2.4E-37 348.6 37.3 209 816-1054 477-695 (710)
445 PRK14256 phosphate ABC transpo 100.0 1E-33 2.2E-38 313.3 24.4 212 148-396 17-235 (252)
446 PRK14269 phosphate ABC transpo 100.0 9.3E-34 2E-38 312.4 23.9 212 148-396 15-229 (246)
447 COG4148 ModC ABC-type molybdat 100.0 7E-35 1.5E-39 304.2 14.0 195 153-396 16-217 (352)
448 PRK14266 phosphate ABC transpo 100.0 6.6E-34 1.4E-38 314.5 22.6 208 840-1054 14-229 (250)
449 TIGR01189 ccmA heme ABC export 100.0 3.7E-34 8E-39 305.0 19.8 185 840-1041 11-197 (198)
450 PRK14235 phosphate transporter 100.0 9.8E-34 2.1E-38 315.6 23.9 212 148-396 32-250 (267)
451 PRK14274 phosphate ABC transpo 100.0 1E-33 2.2E-38 314.5 23.7 210 149-396 26-242 (259)
452 PRK13546 teichoic acids export 100.0 1.8E-33 4E-38 311.4 25.6 205 840-1066 35-239 (264)
453 PRK14245 phosphate ABC transpo 100.0 1E-33 2.2E-38 313.0 23.2 211 148-396 16-233 (250)
454 COG3845 ABC-type uncharacteriz 100.0 8.7E-34 1.9E-38 319.6 22.9 250 831-1089 6-262 (501)
455 COG4987 CydC ABC-type transpor 100.0 2E-34 4.4E-39 326.6 17.9 202 147-397 350-561 (573)
456 PRK14270 phosphate ABC transpo 100.0 1.3E-33 2.8E-38 312.3 24.0 207 148-396 17-234 (251)
457 PRK11160 cysteine/glutathione 100.0 6.9E-34 1.5E-38 350.1 24.2 200 149-397 354-562 (574)
458 TIGR00958 3a01208 Conjugate Tr 100.0 8.5E-34 1.8E-38 357.0 25.5 206 148-397 494-702 (711)
459 TIGR03375 type_I_sec_LssB type 100.0 7.6E-34 1.6E-38 358.1 25.1 208 148-397 478-688 (694)
460 KOG0059 Lipid exporter ABCA1 a 100.0 1E-32 2.2E-37 351.5 35.5 199 844-1054 580-782 (885)
461 PRK14241 phosphate transporter 100.0 9.5E-34 2.1E-38 314.5 22.8 207 149-396 18-241 (258)
462 PRK14264 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 320.6 23.7 210 840-1054 56-284 (305)
463 PRK14248 phosphate ABC transpo 100.0 3.6E-33 7.9E-38 311.5 27.5 210 149-396 35-251 (268)
464 TIGR03375 type_I_sec_LssB type 100.0 1.6E-32 3.5E-37 346.1 36.7 211 816-1054 463-683 (694)
465 PRK13545 tagH teichoic acids e 100.0 1.3E-33 2.8E-38 329.2 24.6 203 842-1066 37-239 (549)
466 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.4E-34 5.3E-39 319.5 17.7 196 842-1055 17-221 (275)
467 PRK14252 phosphate ABC transpo 100.0 1.4E-33 3E-38 314.4 23.6 204 840-1054 27-244 (265)
468 COG1132 MdlB ABC-type multidru 100.0 2.2E-34 4.8E-39 355.0 19.0 211 815-1054 327-547 (567)
469 PRK14239 phosphate transporter 100.0 1.6E-33 3.5E-38 311.8 24.0 210 149-396 19-235 (252)
470 PRK13540 cytochrome c biogenes 100.0 4.9E-34 1.1E-38 304.5 19.0 184 840-1040 12-197 (200)
471 PRK14259 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 314.4 23.6 209 148-396 26-252 (269)
472 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.6E-34 7.8E-39 314.3 18.2 196 842-1054 16-221 (238)
473 cd03215 ABC_Carb_Monos_II This 100.0 5.4E-34 1.2E-38 299.3 18.6 160 844-1047 15-181 (182)
474 cd03254 ABCC_Glucan_exporter_l 100.0 3.4E-34 7.4E-39 312.6 17.6 197 842-1054 16-221 (229)
475 PRK10418 nikD nickel transport 100.0 2E-33 4.3E-38 311.1 23.9 206 149-396 17-229 (254)
476 PRK14244 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 311.3 23.3 212 148-396 18-236 (251)
477 COG4152 ABC-type uncharacteriz 100.0 3.8E-34 8.2E-39 293.9 16.5 210 146-400 13-222 (300)
478 TIGR02324 CP_lyasePhnL phospho 100.0 1E-33 2.2E-38 307.8 20.9 191 842-1043 21-223 (224)
479 PRK11701 phnK phosphonate C-P 100.0 2.2E-33 4.8E-38 311.6 23.8 206 149-396 20-240 (258)
480 cd03297 ABC_ModC_molybdenum_tr 100.0 1.3E-33 2.7E-38 304.7 21.2 192 153-390 16-214 (214)
481 PRK14240 phosphate transporter 100.0 2.4E-33 5.1E-38 310.1 23.4 210 149-396 17-233 (250)
482 TIGR03269 met_CoM_red_A2 methy 100.0 1.3E-33 2.7E-38 344.5 23.4 206 839-1054 10-253 (520)
483 KOG0056 Heavy metal exporter H 100.0 1.4E-34 3.1E-39 319.2 13.5 210 146-397 549-761 (790)
484 COG4161 ArtP ABC-type arginine 100.0 6.2E-34 1.3E-38 273.4 16.0 211 833-1054 6-225 (242)
485 PRK09544 znuC high-affinity zi 100.0 1.2E-33 2.6E-38 311.4 20.7 187 840-1054 15-204 (251)
486 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.5E-33 3.3E-38 313.1 21.7 198 149-397 18-225 (275)
487 PRK14271 phosphate ABC transpo 100.0 3.4E-33 7.4E-38 312.3 24.6 211 148-396 34-250 (276)
488 PRK14236 phosphate transporter 100.0 5.2E-33 1.1E-37 310.7 26.0 209 149-395 39-254 (272)
489 PRK11176 lipid transporter ATP 100.0 5.2E-34 1.1E-38 353.4 19.8 213 815-1054 340-562 (582)
490 TIGR01193 bacteriocin_ABC ABC- 100.0 9.1E-34 2E-38 358.2 22.3 207 149-397 488-697 (708)
491 TIGR03771 anch_rpt_ABC anchore 100.0 1.5E-33 3.3E-38 305.7 20.8 194 850-1055 1-197 (223)
492 PRK14255 phosphate ABC transpo 100.0 7E-33 1.5E-37 306.7 26.4 210 148-395 18-234 (252)
493 PRK03695 vitamin B12-transport 100.0 2.1E-33 4.6E-38 309.5 22.2 200 150-395 11-220 (248)
494 PRK14263 phosphate ABC transpo 100.0 2.9E-33 6.3E-38 310.5 23.3 209 148-396 21-244 (261)
495 PRK10790 putative multidrug tr 100.0 7.7E-34 1.7E-38 352.2 20.9 210 815-1054 339-558 (592)
496 TIGR01846 type_I_sec_HlyB type 100.0 3.2E-32 6.9E-37 343.1 35.8 212 815-1054 454-675 (694)
497 PRK14272 phosphate ABC transpo 100.0 3.8E-33 8.2E-38 308.9 24.1 208 148-396 17-235 (252)
498 cd03252 ABCC_Hemolysin The ABC 100.0 1.6E-33 3.5E-38 308.9 20.9 205 148-396 15-224 (237)
499 cd03213 ABCG_EPDR ABCG transpo 100.0 3.8E-33 8.1E-38 295.8 23.0 170 148-390 22-194 (194)
500 PRK14261 phosphate ABC transpo 100.0 3.5E-33 7.7E-38 309.1 23.7 211 148-396 19-236 (253)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.3e-200 Score=1809.24 Aligned_cols=1046 Identities=53% Similarity=0.882 Sum_probs=973.3
Q ss_pred cchHHhhhHHHHhcCCChhhhhhcccccc-CCCeeeeeccccChHhhHHHHHHHhhcccCChHHHHHHHHHHHHhcCCCC
Q 001154 19 VEDEEALRWAALERLPTYARARRGIFKNV-VGDVKEVDVSELAVQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLEL 97 (1136)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (1136)
+||||+|+|||+|||||++| +++.+. ++ ++|+.++++.+++.+.++..+..++|+|+++.++|+|++++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 45999999999999999999 555432 33 79999999999999999999999999999999999999998 89
Q ss_pred CCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeeeeceeEEEeCCeEEEEEcCCCCChhHH
Q 001154 98 PKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTL 177 (1136)
Q Consensus 98 p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTL 177 (1136)
|.++++++++.++++++.| ||+.|...+.++.+++..+.. ++.+.+||+|+||.++||+|++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999999876 999999999998877666543 4556789999999999999999999999999999
Q ss_pred HHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhC
Q 001154 178 LLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAG 257 (1136)
Q Consensus 178 L~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~ 257 (1136)
|++|+|.++......|+|+|||++.+++.+++.++|++|+|+|+|+|||||||+|+++|++++.|++ +..|+|+..
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~- 233 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA- 233 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-
Confidence 9999999988777789999999999999999999999999999999999999999999999999988 555666542
Q ss_pred CCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCC
Q 001154 258 IKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGL 337 (1136)
Q Consensus 258 ~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgL 337 (1136)
.++|++++++||++|+||+|||+++||+||||||||+||++++++++++||||+|+||
T Consensus 234 ----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 234 ----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 2589999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHH
Q 001154 338 DSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQ 417 (1136)
Q Consensus 338 D~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~ 417 (1136)
|++|+.+++++|++++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHH
Q 001154 418 EVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLL 497 (1136)
Q Consensus 418 ~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~ 497 (1136)
++++++++.++|..+..|+.+.++.+|.+.|.+++.++++..+++.++++.+.|+.++..++|.++.|+|++.|+.|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccc
Q 001154 498 LMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHF 577 (1136)
Q Consensus 498 ~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~ 577 (1136)
+++||.+++++++++.+++|+++|++|+++.+ .+..++..+.|++||++++.++++++++.++++++||++|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999985 5556778889999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHH
Q 001154 578 YPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFA 657 (1136)
Q Consensus 578 y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~ 657 (1136)
||+||++++.+++++|+.++++++|.+|+||++|+.+++++||++++++++.+++++++||+++++++++.+|+++|++.
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCcccccC------------CC---CCCchhHHHhhh
Q 001154 658 MLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKA------------GN---SNFSLGEAILRQ 722 (1136)
Q Consensus 658 ~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~------------~~---~~~~~g~~~l~~ 722 (1136)
++++.+++||+|++.+||+||+|++|++|++|+++++++|||.+.+|.|.+ .. ...+.|..+++.
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 999999999999999999999999999999999999999999999999872 11 235778899998
Q ss_pred cCCC-----CCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhh-cCcchhHHhhhhhhccc
Q 001154 723 RSLF-----PESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRR-KGENVVIELREYLQRSS 796 (1136)
Q Consensus 723 ~~~~-----~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 796 (1136)
+++. +..+|+|+++|+++||.++|+++..+++.|+++..+.+..+..++..+..... +......+. ..
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~ 763 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAGSSSEIEK------LD 763 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhccccccccc------cc
Confidence 8887 78899999999999999999999999999999998888876654433221110 000000000 00
Q ss_pred cccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhccc
Q 001154 797 SLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLA 876 (1136)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~ 876 (1136)
...+.+.+++++|+++..++++||.|.++++.+++.+| +++++|+|||+.++||.++||||+||||||||||+|+
T Consensus 764 --~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA 838 (1391)
T KOG0065|consen 764 --DSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLA 838 (1391)
T ss_pred --cccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHh
Confidence 00011356789999999999999999999999998777 7899999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc
Q 001154 877 GRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL 956 (1136)
Q Consensus 877 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~ 956 (1136)
||+++|.++|+|.|||+|+.+..++|.+|||+|+|+|.+.+||+|+|.|+|+||+|.+++.+++.+.||++++.++|.++
T Consensus 839 ~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~ 918 (1391)
T KOG0065|consen 839 GRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY 918 (1391)
T ss_pred cCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh
Confidence 99999999999999999999899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh
Q 001154 957 SGALIGLPGINGLSTEQRKRLTIAVELVANP-SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES 1035 (1136)
Q Consensus 957 ~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p-~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~ 1035 (1136)
+|.++|.|| +|||++|||||+||++|++|| .||||||||||||++++..|++++|+++++|+|||||+||||.++++.
T Consensus 919 ~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~ 997 (1391)
T KOG0065|consen 919 ADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEA 997 (1391)
T ss_pred hhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHH
Confidence 999999999 899999999999999999999 899999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEecCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCccceeeeecCCccccccCCcHHHHhccChHHHHHHh
Q 001154 1036 FDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPVEESRLGVDFAEIYRRSNLFQYVHV 1115 (1136)
Q Consensus 1036 ~d~~~~l~~gG~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 1115 (1136)
||++++|++||++||+||+|++++++++||++++|++ |++..|||||||||++.+.+...+.||+++|++|++|+++++
T Consensus 998 FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e 1076 (1391)
T KOG0065|consen 998 FDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKE 1076 (1391)
T ss_pred HhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHHH
Confidence 9999999999999999999999999999999998885 666669999999999999999999999999999999999998
Q ss_pred hccC
Q 001154 1116 LGEF 1119 (1136)
Q Consensus 1116 ~~~~ 1119 (1136)
++++
T Consensus 1077 ~v~~ 1080 (1391)
T KOG0065|consen 1077 LVKE 1080 (1391)
T ss_pred HHHH
Confidence 8654
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.1e-182 Score=1774.78 Aligned_cols=1113 Identities=60% Similarity=1.018 Sum_probs=985.9
Q ss_pred ccccccCC-CCC---CCcchHHhhhHHHHhcCCChhhhhhcccccc-----CCC---eeeeeccccChHhhHHHHHHHhh
Q 001154 6 ENVFSRTS-SFR---DEVEDEEALRWAALERLPTYARARRGIFKNV-----VGD---VKEVDVSELAVQEQRLVLDRLVN 73 (1136)
Q Consensus 6 ~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~ 73 (1136)
+++|++.+ +++ ..|||||+|+|||+||||||+|+|++++... .|+ ..++|+++|+.++++.++++|++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (1470)
T PLN03140 24 EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFK 103 (1470)
T ss_pred hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhhc
Confidence 67887643 222 3678999999999999999999999999653 122 23699999999999999999999
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeeeec
Q 001154 74 AVEDDPERFFDRMRKRCEAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDD 153 (1136)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 153 (1136)
++++|+++|++++++|.+++|+++|++||||+||+|++++.++++.+||++|.+.+.++.+...++....++.+++||+|
T Consensus 104 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~ 183 (1470)
T PLN03140 104 VAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKD 183 (1470)
T ss_pred ccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccC
Confidence 99999999999999999999999999999999999999999999999999999999888766544432344456889999
Q ss_pred eeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHHHHHHHh
Q 001154 154 LSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFA 233 (1136)
Q Consensus 154 vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~ 233 (1136)
+||.++||++++|+|||||||||||++|+|+++++..++|+|+|||+++++..+++.++||+|+|.|++++||+|||.|+
T Consensus 184 vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~ 263 (1470)
T PLN03140 184 ASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFS 263 (1470)
T ss_pred CeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHH
Confidence 99999999999999999999999999999999887678999999999987776678899999999999999999999999
Q ss_pred hhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhh
Q 001154 234 GQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKK 313 (1136)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGqkk 313 (1136)
++|++.+.++++..+..++++..++.|+.+++.+|++...++.+.+..++++|+.+||++|+||.||++++++|||||||
T Consensus 264 a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerk 343 (1470)
T PLN03140 264 ARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKK 343 (1470)
T ss_pred HHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccce
Confidence 99988777666655666777777788888899999988888777788899999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChh
Q 001154 314 RLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRV 393 (1136)
Q Consensus 314 Rvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~ 393 (1136)
||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+||++
T Consensus 344 RVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~ 423 (1470)
T PLN03140 344 RVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRD 423 (1470)
T ss_pred eeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHH
Confidence 99999999999999999999999999999999999999987667899999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcCcccccCCCcC
Q 001154 394 SVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPA 473 (1136)
Q Consensus 394 ~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1136)
++++||+++||+||+++|+|||+++++++++++++|.....|++++++++|+++|++++.++.+.++++.+.++...++.
T Consensus 424 ~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 503 (1470)
T PLN03140 424 HILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKA 503 (1470)
T ss_pred HHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccc
Confidence 99999999999999999999999999999888888877777888889999999999999988888887777666666666
Q ss_pred ccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHH
Q 001154 474 ALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILF 553 (1136)
Q Consensus 474 ~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~ 553 (1136)
....++|..++++|++.|++|++++++||+..+++++++.+++|+++|++||+++++.....++..+.|++||++++.++
T Consensus 504 ~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~ 583 (1470)
T PLN03140 504 ALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMF 583 (1470)
T ss_pred cccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 66667899999999999999999999999999999999999999999999999987665555677889999999999999
Q ss_pred HHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHH
Q 001154 554 NGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMS 633 (1136)
Q Consensus 554 ~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~l~~~~~ 633 (1136)
++++++..++.+||||+|||+..||++|+|+++++++++|+.++++++|++|+|||+|+.+++.+||.++++++++++++
T Consensus 584 ~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~ 663 (1470)
T PLN03140 584 NGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMA 663 (1470)
T ss_pred HHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCcccccC-CCCC
Q 001154 634 IGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKA-GNSN 712 (1136)
Q Consensus 634 ~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~-~~~~ 712 (1136)
.++|++++++++++.+|+++++++++++++|+||+++++.||+||+|++|+||++|+++++++|||.+..|.+.. .+..
T Consensus 664 ~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~ 743 (1470)
T PLN03140 664 AGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNS 743 (1470)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998886432 2335
Q ss_pred CchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcC-------cc--
Q 001154 713 FSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKG-------EN-- 783 (1136)
Q Consensus 713 ~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-- 783 (1136)
.+.|+.+|+.+++...+.|+|++++++++|+++|+++++++++|.++.........++........... +.
T Consensus 744 ~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1470)
T PLN03140 744 TRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGN 823 (1470)
T ss_pred cccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccccccccccccc
Confidence 678999999999999899999999999999999999999999999876655444332211100000000 00
Q ss_pred h--hHHh--hhhhhc-----ccc--ccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEE
Q 001154 784 V--VIEL--REYLQR-----SSS--LNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAF 852 (1136)
Q Consensus 784 ~--~~~~--~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i 852 (1136)
. .... +..... ... ......+.+++.+|+.|.+++|+|++|.++.+.+.++.+...+++.+|+|||+++
T Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i 903 (1470)
T PLN03140 824 NTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAF 903 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEE
Confidence 0 0000 000000 000 0000123456778999999999999999998877776666667788999999999
Q ss_pred ECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCC
Q 001154 853 RPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLP 932 (1136)
Q Consensus 853 ~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~ 932 (1136)
+||+++||||||||||||||++|+|+.++|..+|+|.+||.+.....+++.+|||+|+|.+++.+||+|+|.|++.+|.+
T Consensus 904 ~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~ 983 (1470)
T PLN03140 904 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLP 983 (1470)
T ss_pred ECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCC
Confidence 99999999999999999999999999877678999999999876556677899999999999999999999999988876
Q ss_pred CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 001154 933 SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1136)
Q Consensus 933 ~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1136)
.+.+.+++++.++++++.++|.+++|..+|.+++++|||||||||+||+||+.+|+||||||||||||+.++..+++.|+
T Consensus 984 ~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~ 1063 (1470)
T PLN03140 984 KEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR 1063 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 65556666778999999999999999999888778999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCccceeeeecCCcc
Q 001154 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPVE 1092 (1136)
Q Consensus 1013 ~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~npa~~~l~~~~~~~ 1092 (1136)
+++++|+|||||+|||+.++++.||++++|++||+++|.||.+.+++++++||++++|+++||+++||||||||+++.+.
T Consensus 1064 ~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~ 1143 (1470)
T PLN03140 1064 NTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAA 1143 (1470)
T ss_pred HHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccc
Confidence 99988999999999999778899999999998899999999999999999999999888889999999999999998776
Q ss_pred ccccCCcHHHHhccChHHHHHHhhcc
Q 001154 1093 ESRLGVDFAEIYRRSNLFQYVHVLGE 1118 (1136)
Q Consensus 1093 ~~~~~~~~~~~~~~s~~~~~~~~~~~ 1118 (1136)
+.+.+.||++.|++|+++++++++++
T Consensus 1144 ~~~~~~d~~~~~~~s~~~~~~~~~~~ 1169 (1470)
T PLN03140 1144 EVKLGIDFAEHYKSSSLYQRNKALVK 1169 (1470)
T ss_pred cccccchHHHHHhccHHHHHHHHHHH
Confidence 66667899999999999998876653
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=5.6e-143 Score=1411.11 Aligned_cols=994 Identities=32% Similarity=0.527 Sum_probs=806.6
Q ss_pred CChHHHHHHHHHHHHhcCCCCC--CcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeeeece
Q 001154 77 DDPERFFDRMRKRCEAVDLELP--KIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDL 154 (1136)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~p--~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 154 (1136)
.|.+++++.++++.++.+...| +++|+|+||+|++ ...+....||+.|.+.+........+. ..+++.+++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 5677888776666666665555 9999999999999 444566789999998887664433321 12334567899999
Q ss_pred eEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC-cceeeEEEECCccCCCCC--CCceEEEEeccCCCCCCCCHHHHHH
Q 001154 155 SGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMTVRETLD 231 (1136)
Q Consensus 155 s~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~-~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1136)
|+.++|||+++|+||||||||||||+|+|+..+. .+.+|+|.|||.++.+.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999987432 236999999998875432 3456999999999999999999999
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhh
Q 001154 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1136)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1136)
|+++++.+..+.... .+.++ .+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~~~---~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPDGV---SREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCCCC---CHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 998876432211000 00000 0123577899999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecC
Q 001154 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1136)
Q Consensus 312 kkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~ 391 (1136)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999876678889999999999999999999999999999999
Q ss_pred hhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcCccccc---
Q 001154 392 RVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRR--- 468 (1136)
Q Consensus 392 ~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 468 (1136)
++++.+||+++||.||++.|+|||++++++..++ +++... +.....++++++++|+++..++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~-e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGY-EKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccc-cccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999886543 222211 11123468899999999887766655544321110
Q ss_pred ------------CCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 001154 469 ------------FNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDD 536 (1136)
Q Consensus 469 ------------~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~ 536 (1136)
...+.....++|..+++.|++.|++|+++.++||+..++.++++.+++|+++|++||+.+.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 001112234568899999999999999999999999999999999999999999999987543 24
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccH
Q 001154 537 GGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNV 616 (1136)
Q Consensus 537 ~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~ 616 (1136)
.....|++||++++.++.++.++..++.+||||+|||..++|++++|++++++.++|+.++.+++|++++|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 45678999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHH
Q 001154 617 VRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASV 696 (1136)
Q Consensus 617 ~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~ 696 (1136)
.+||.+++++++...++.++++++++++++..+|+.+++++++++++++||+++.+.||+||+|++|+||+.|+++++++
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCcccccC--C----------------------CCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 001154 697 NEFLGHSWDKKA--G----------------------NSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTF 752 (1136)
Q Consensus 697 nef~~~~~~~~~--~----------------------~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~ 752 (1136)
|||.+..+.|.. | +.....|+++|+. .+.....|+|.+++++++|+++|.++.++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887631 0 1124578899985 44445568999999999999999999999
Q ss_pred HHHhcCCCCCcccccchhhh--hh-HhhhhcCcchhHHhhhhhhccccccCccccc--CCccccc--ccceeeeecceee
Q 001154 753 FLSYLNPLGKQQAVVSKKEL--QE-RDRRRKGENVVIELREYLQRSSSLNGKYFKQ--KGMVLPF--QPLSMAFGNINYF 825 (1136)
Q Consensus 753 ~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~ 825 (1136)
+++|.++............. .. .......+......+..............+. .....|. ....+.|+|++|.
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~ 768 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYE 768 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEEE
Confidence 99998855433222111110 00 0000000000000000000000000000000 0000010 1224678888877
Q ss_pred eeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc-eeEEEEEEcCccCChhcccceE
Q 001154 826 VDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARIS 904 (1136)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~ 904 (1136)
++.. .+++.+|+|||++++|||++||||||||||||||++|+|+.+++ +.+|+|.+||++... .+++.+
T Consensus 769 ~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i 838 (1394)
T TIGR00956 769 VKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSI 838 (1394)
T ss_pred ecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcce
Confidence 6321 23568999999999999999999999999999999999987643 457999999998753 467889
Q ss_pred EEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHh
Q 001154 905 GYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1136)
Q Consensus 905 gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~ 984 (1136)
|||+|+|.+++.+||+|+|.|++.++.+.+.+.+++.+.++++++.++|.+++|+.++.++. +|||||||||+||+||+
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~ 917 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELV 917 (1394)
T ss_pred eeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHH
Confidence 99999999999999999999999888766556666677899999999999999998876543 79999999999999999
Q ss_pred hCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCchhHHHH
Q 001154 985 ANPS-IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIK 1063 (1136)
Q Consensus 985 ~~p~-illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~ 1063 (1136)
.+|+ ||||||||||||+.++..+++.|++++++|+|||||+|||+..+++.||++++|++||+++|.|+.+.+++++++
T Consensus 918 ~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~ 997 (1394)
T TIGR00956 918 AKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIIN 997 (1394)
T ss_pred cCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHH
Confidence 9997 999999999999999999999999998889999999999997677889999999988899999999998899999
Q ss_pred HHHhcCCCCCCCCCCCccceeeeecCCccccccCCcHHHHhccChHHHHHHhh
Q 001154 1064 YFEAVEGVPKIRPGYNPAAWMLEVTSPVEESRLGVDFAEIYRRSNLFQYVHVL 1116 (1136)
Q Consensus 1064 ~~~~~~g~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 1116 (1136)
||+.+ |.++||+++|||||+||+++.+.+.....||++.|++|++++++.+.
T Consensus 998 yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 1049 (1394)
T TIGR00956 998 YFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNE 1049 (1394)
T ss_pred HHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHH
Confidence 99986 87789999999999999998765544457999999999998876543
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.3e-82 Score=767.73 Aligned_cols=585 Identities=30% Similarity=0.480 Sum_probs=491.7
Q ss_pred CCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeeeeceeEEEeCCeEEEEEcCCCCChhH
Q 001154 97 LPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTT 176 (1136)
Q Consensus 97 ~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 176 (1136)
...++++|+|+++++... .+ ..+++|+||||.++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 346889999999987531 01 3468999999999999999999999999999
Q ss_pred HHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHh
Q 001154 177 LLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIA 256 (1136)
Q Consensus 177 LL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 256 (1136)
||++|+|+.......+|+|++||++.+....++.+|||.|+|.++|++||+|||.|+++++.+... .
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~-------~------ 138 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSL-------S------ 138 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCC-------C------
Confidence 999999999876678999999998877777788999999999999999999999999998865421 1
Q ss_pred CCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCC
Q 001154 257 GIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNG 336 (1136)
Q Consensus 257 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsg 336 (1136)
.++.+.+++++++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 139 ------------------~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 139 ------------------KEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 11224579999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHH
Q 001154 337 LDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1136)
Q Consensus 337 LD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 416 (1136)
||+.++.++++.|+++|+. |+|+|+++|||+.+++++||++++|++|+++|+|+++++.+||+++||+||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999987 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHH
Q 001154 417 QEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQL 496 (1136)
Q Consensus 417 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~ 496 (1136)
.++.+..+..+.... ........+.++......+............ .........++|.|+..+++|.+
T Consensus 280 l~l~s~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~q~~~L~~R~~ 348 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEE------AVRIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGTSPSWWTQFKILLKRSL 348 (613)
T ss_pred HHHHccCCCchhHHh------HHHHHHHhhhccccchhhhhHHHHhhhcccc-----cccccccCCcHHHHHHHHHHHHh
Confidence 998874311000000 0000001111110000000000000000000 00001116789999999999999
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHH-HHHHHHhhchhhhhhccc
Q 001154 497 LLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFT-EVSMLVAKLPVLYKHRDL 575 (1136)
Q Consensus 497 ~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~-~~~~~~~~~~v~~k~r~~ 575 (1136)
..++|++.++..|.++.+++++++|++||+.+.+... .....|++|+.+.+..+..+. .+..+..++++|.||+..
T Consensus 349 ~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~---~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~ 425 (613)
T KOG0061|consen 349 KNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKG---IQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETSS 425 (613)
T ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHH---HHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhc
Confidence 9999999999999999999999999999998654332 235578888888887666655 688899999999999999
Q ss_pred cccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHH
Q 001154 576 HFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGS 655 (1136)
Q Consensus 576 ~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~ 655 (1136)
++|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.++++.++...++.+++.+++++.++...|.++++
T Consensus 426 ~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~ 505 (613)
T KOG0061|consen 426 GLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLGP 505 (613)
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCcccccCC--CCCCchhHHHhhhcCCCCCCccHH
Q 001154 656 FAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAG--NSNFSLGEAILRQRSLFPESYWYW 733 (1136)
Q Consensus 656 ~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~l~~~~~~~~~~~~w 733 (1136)
++++.+++++||+++.+.||.||.|+.|+|++.|+++++..|+|.+....|... ..+...+..+++..++...+ .|
T Consensus 506 ~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~ 583 (613)
T KOG0061|consen 506 VLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS--FW 583 (613)
T ss_pred HHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--cc
Confidence 999999999999999999999999999999999999999999998733333222 35677889999988886654 58
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Q 001154 734 IGVGAMLGYTLLFNALFTFFLSYLN 758 (1136)
Q Consensus 734 ~~~g~ll~~~~~f~~l~~~~l~~~~ 758 (1136)
.++.++++++++|.++.++++.+..
T Consensus 584 ~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 584 LDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999998753
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=6.3e-81 Score=769.77 Aligned_cols=569 Identities=24% Similarity=0.400 Sum_probs=479.7
Q ss_pred CcceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCC
Q 001154 145 RSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 145 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 224 (1136)
+.++++|+|+|+.++|||+++|+|||||||||||++|+|+.++....+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34578999999999999999999999999999999999998765456899999999876444567899999999999999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc-
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM- 303 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~- 303 (1136)
||+|||.|+++++.+..... ++...+++++++.+||.+++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~~~-------------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVTK-------------------------------KEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCCH-------------------------------HHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 99999999987764321100 0112358999999999999999999864
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
.++|||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++. +.|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~~-g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQK-GKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 6899999999999999999999999999999999999999999999999864 788899999999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcC
Q 001154 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1136)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1136)
|+++|+|+++++.+||+++||+||++.|||||+.++.+....... . .....+++.+.|+.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998865322110 0 011234555666655544443332221
Q ss_pred ccccc--C-CCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhh
Q 001154 464 PFDRR--F-NHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLY 540 (1136)
Q Consensus 464 ~~~~~--~-~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~ 540 (1136)
..... . ..........+..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 11100 0 00011122456788999999999999999999999999999999999999999999976443 233455
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHH
Q 001154 541 LGALYFSMVIILFNGF-TEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRF 619 (1136)
Q Consensus 541 ~g~lf~~l~~~~~~~~-~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f 619 (1136)
.|++|+.++..++.++ ..+..+..++++++|||..++|++++|++++.+.++|+.++.+++|++++|||+|+.+++.+|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889999888877765 456677789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhh
Q 001154 620 SRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEF 699 (1136)
Q Consensus 620 ~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef 699 (1136)
+.+++++++...++.+++.++++++++..+|..+++++.+++++++||+++...||.||+|++|+||++|+++++++|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cccCC---CCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001154 700 LGHSW-DKKAG---NSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYL 757 (1136)
Q Consensus 700 ~~~~~-~~~~~---~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~ 757 (1136)
.+..+ .|... ..+...|+.+++.+++... ++|.+++++++++++|.++.+++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765 33221 1133468999999988664 459999999999999999999999874
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=6.3e-80 Score=759.26 Aligned_cols=607 Identities=22% Similarity=0.323 Sum_probs=468.6
Q ss_pred CCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHH--HHHHHhHhcCCCcceeeeeceeEEEeCCeEEEEEcCCCCCh
Q 001154 97 LPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEA--LLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGK 174 (1136)
Q Consensus 97 ~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 174 (1136)
.++++++|.|+++.+.......+...+ ...+.. -.+++.. +..++++|+|+|++++|||+++|+|||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~---~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGK 107 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSNI----KRILGHKPKISDETR---QIQERTILNGVTGMASPGEILAVLGPSGSGK 107 (659)
T ss_pred CCceEEEEEeEEEEEccCCCccccccc----ccccccccccccccc---cCCCCeeeeCCEEEEECCEEEEEECCCCCCH
Confidence 457999999999997543111111111 110000 0011111 1124579999999999999999999999999
Q ss_pred hHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHH
Q 001154 175 TTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREK 254 (1136)
Q Consensus 175 STLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~ 254 (1136)
||||++|+|++++. ..+|+|.+||+++... ..+.++||+|++.+++.+||+||+.|++.++.+.... +.
T Consensus 108 STLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~-------~~-- 176 (659)
T PLN03211 108 STLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLT-------KQ-- 176 (659)
T ss_pred HHHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCC-------HH--
Confidence 99999999998763 3599999999987532 2356999999999999999999999987654221100 00
Q ss_pred HhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCC
Q 001154 255 IAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEIS 334 (1136)
Q Consensus 255 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEpt 334 (1136)
+...+++++++.+||++++||.||+...++|||||||||+||++|+.+|+||+|||||
T Consensus 177 ----------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPt 234 (659)
T PLN03211 177 ----------------------EKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPT 234 (659)
T ss_pred ----------------------HHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCC
Confidence 0123478899999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHH
Q 001154 335 NGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVAD 414 (1136)
Q Consensus 335 sgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~ad 414 (1136)
+|||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.||||
T Consensus 235 sgLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpAD 313 (659)
T PLN03211 235 SGLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPAD 313 (659)
T ss_pred CCcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHH
Confidence 99999999999999999986 47788888888888899999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcCc-ccc--cC-----CCcCc-cCCCCCCCcHH
Q 001154 415 FLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP-FDR--RF-----NHPAA-LSTSKYGEKRS 485 (1136)
Q Consensus 415 fl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~-----~~~~~-~~~~~~~~s~~ 485 (1136)
|+.++++...+.........+ .....+.+.|++.. .+......... ... .. ..+.. .....+..+++
T Consensus 314 f~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 389 (659)
T PLN03211 314 FLLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWF 389 (659)
T ss_pred HHHHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHH
Confidence 999998754321100000001 01223334443211 11111110000 000 00 00000 01122456799
Q ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHH-HHHHHHHHHHh
Q 001154 486 ELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILF-NGFTEVSMLVA 564 (1136)
Q Consensus 486 ~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~-~~~~~~~~~~~ 564 (1136)
.|+..+++|.+.. +|+..+...|+++.+++|+++|++||+.+ ..+.+...|++||++++.++ ..+..+..+..
T Consensus 390 ~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~ 463 (659)
T PLN03211 390 NQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQ 463 (659)
T ss_pred HHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 78888888999999999999999999874 22345668999998777554 55678888889
Q ss_pred hchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 001154 565 KLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLG 644 (1136)
Q Consensus 565 ~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~ 644 (1136)
++++++|||..++|++++|++++++.++|+.++.+++|.+++|||+|+.+++.+|+.+++++++...++.+++.++++++
T Consensus 464 er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~ 543 (659)
T PLN03211 464 ERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAI 543 (659)
T ss_pred hhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCcc-----cccCCCCCCchhHHH
Q 001154 645 RNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSW-----DKKAGNSNFSLGEAI 719 (1136)
Q Consensus 645 ~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~g~~~ 719 (1136)
++..+|+++++++++++++|+||+++ .||+||+|++|+||+.|+++++++|||.+.+. .|..+.+....+..+
T Consensus 544 ~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~ 621 (659)
T PLN03211 544 MDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKF 621 (659)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCcc
Confidence 99999999999999999999999997 79999999999999999999999999976432 232111100001112
Q ss_pred hhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001154 720 LRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLN 758 (1136)
Q Consensus 720 l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~ 758 (1136)
+....+. ....|.+++++++++++|.++.++++++.+
T Consensus 622 ~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 622 VEEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred chhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2222222 234788999999999999999999987653
No 7
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.6e-78 Score=795.43 Aligned_cols=597 Identities=23% Similarity=0.385 Sum_probs=495.7
Q ss_pred CCCCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeeeeceeEEEeCCeEEEEEcCCCCCh
Q 001154 95 LELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGK 174 (1136)
Q Consensus 95 ~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGK 174 (1136)
++..++.+.|+||+++++...+.+. ...++.++++|+|||+.++||++++|+|||||||
T Consensus 861 ~~~~~~~~~~~~v~y~v~~~~~~~~---------------------~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGK 919 (1470)
T PLN03140 861 LPFTPLAMSFDDVNYFVDMPAEMKE---------------------QGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGK 919 (1470)
T ss_pred cCCCcceEEEEEEEEEEccCccccc---------------------cccCcCCceEeeCcEEEEECCeEEEEECCCCCCH
Confidence 3555678999999999864311000 0111234579999999999999999999999999
Q ss_pred hHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHH
Q 001154 175 TTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREK 254 (1136)
Q Consensus 175 STLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~ 254 (1136)
||||++|+|+..+. ..+|+|.+||++..+...++.+|||+|+|.|++.+||+|||.|++.++.+... . +
T Consensus 920 TTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~-~------~--- 988 (1470)
T PLN03140 920 TTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEV-S------K--- 988 (1470)
T ss_pred HHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCC-C------H---
Confidence 99999999986542 46899999998875434456799999999999999999999998765422110 0 0
Q ss_pred HhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCC
Q 001154 255 IAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEIS 334 (1136)
Q Consensus 255 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEpt 334 (1136)
.+....++++++.+||.+++|+.||+..+++|||||||||+||++|+.+|++|||||||
T Consensus 989 ---------------------~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPT 1047 (1470)
T PLN03140 989 ---------------------EEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPT 1047 (1470)
T ss_pred ---------------------HHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCC
Confidence 00123588999999999999999998878899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC-CeEEEecCh----hhHHHHHHhc-CC-CCC
Q 001154 335 NGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE-GQIVYQGPR----VSVLDFFASM-GF-SCP 407 (1136)
Q Consensus 335 sgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~-G~iv~~G~~----~~~~~~F~~~-Gf-~cp 407 (1136)
+|||+.++..+++.|+++++. ++|+|+++||+..+++++||++++|++ |+++|+||. +++.+||+++ |+ +||
T Consensus 1048 sgLD~~~a~~v~~~L~~l~~~-g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p 1126 (1470)
T PLN03140 1048 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIK 1126 (1470)
T ss_pred CCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCC
Confidence 999999999999999999864 778889898888889999999999996 899999996 6899999998 66 499
Q ss_pred CCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcCcccccCCCcCccCCCCCCCcHHHH
Q 001154 408 KRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSEL 487 (1136)
Q Consensus 408 ~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 487 (1136)
++.|||||+.++++..... ....++++.|+.+..+++..+............+.....++|..+++.|
T Consensus 1127 ~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 1194 (1470)
T PLN03140 1127 EKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQ 1194 (1470)
T ss_pred CCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHH
Confidence 9999999999997643211 1123678888888766655443321100000111111235688999999
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHH-HHHHHhhc
Q 001154 488 LKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTE-VSMLVAKL 566 (1136)
Q Consensus 488 ~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~-~~~~~~~~ 566 (1136)
++.|++|+++.+||++.++..|+++.+++|+++|++||+.+.+..+.++.+...|++|+++++..++.+.. ++.+..+|
T Consensus 1195 ~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR 1274 (1470)
T PLN03140 1195 FKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVER 1274 (1470)
T ss_pred HHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998655545555566899999888877766544 45667799
Q ss_pred hhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccC
Q 001154 567 PVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRN 646 (1136)
Q Consensus 567 ~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~ 646 (1136)
++|+|||..++|++++|++++++.++|+.++.+++|.+++|||+||.+++..||.+++++++...++.+++.++++++++
T Consensus 1275 ~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~ 1354 (1470)
T PLN03140 1275 TVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPN 1354 (1470)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCcccccCCCC-CCchhHHH-hhhcC
Q 001154 647 MIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNS-NFSLGEAI-LRQRS 724 (1136)
Q Consensus 647 ~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~-~~~~g~~~-l~~~~ 724 (1136)
..+|..+++++..++++|+||++++..||.||+|+||+||+.|++++++.|||.+....+.+++. +...+.++ +..+|
T Consensus 1355 ~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g 1434 (1470)
T PLN03140 1355 QQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYG 1434 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999887665544431 12334444 66777
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001154 725 LFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNP 759 (1136)
Q Consensus 725 ~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~ 759 (1136)
+.. .|.|.+++++++|+++|.+++.+++++++.
T Consensus 1435 ~~~--~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1435 YDP--DFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred cCc--ccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 764 467899999999999999999999999875
No 8
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.5e-76 Score=721.52 Aligned_cols=560 Identities=26% Similarity=0.390 Sum_probs=474.2
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCC
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 225 (1136)
.++++|+||+|.++||.+|||||+|||||||||++||||.... .++|+|++||++.++...+|.+|||.|+|.|.+++|
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G-~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~T 880 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGG-YIEGDILISGFPKDQETFARVSGYVEQQDIHSPELT 880 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccc-eEEeEEEECCeeCchhhhccccceeecccccCcccc
Confidence 5678999999999999999999999999999999999997543 689999999999987778899999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|||.|.|+|.++.+.+. ++ .+..+.||+|++.|+|++++|.+||+.+ .
T Consensus 881 VrESL~fSA~LRlp~~v-----------------~~--------------~ek~~yVe~Vi~lleL~~~~daiVG~~G-~ 928 (1391)
T KOG0065|consen 881 VRESLRFSAALRLPKEV-----------------SD--------------EEKYEYVEEVIELLELKEYADALVGLPG-S 928 (1391)
T ss_pred hHHHHHHHHHHcCCCcC-----------------CH--------------HHHHHHHHHHHHHhCchhhhhhhccCCC-C
Confidence 99999999988755321 00 1113469999999999999999999877 9
Q ss_pred CCChhhhhHHHHHHHHhCCC-cEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc-C
Q 001154 306 GISGGQKKRLTTGELLVGPA-RVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS-E 383 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p-~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~-~ 383 (1136)
|||.+||||++||-.|+.+| .||||||||||||+.++..|++.+|+++. .|+|++|+||||+.++++.||++++|. +
T Consensus 929 GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrG 1007 (1391)
T KOG0065|consen 929 GLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRG 1007 (1391)
T ss_pred CCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcC
Confidence 99999999999999999999 99999999999999999999999999997 589999999999999999999999996 5
Q ss_pred CeEEEecChh----hHHHHHHhcC-CCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchh
Q 001154 384 GQIVYQGPRV----SVLDFFASMG-FSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLS 458 (1136)
Q Consensus 384 G~iv~~G~~~----~~~~~F~~~G-f~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (1136)
|++||.||.. .+++||++.| .+||+..|||||..|+++...+.. ...++++.|+.+..+++..
T Consensus 1008 GqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~ 1075 (1391)
T KOG0065|consen 1008 GQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNK 1075 (1391)
T ss_pred CeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHH
Confidence 8999999874 4677999987 899999999999999987644321 1237999999999988877
Q ss_pred Hhhc---CcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccc
Q 001154 459 EELA---VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTID 535 (1136)
Q Consensus 459 ~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~ 535 (1136)
+++. .+... .........+|..+.|.|++.|++|++...||++.+...|++..++.++++|..||+.+ .+.+
T Consensus 1076 e~v~~l~~~~~~--~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g---~~~q 1150 (1391)
T KOG0065|consen 1076 ELVKELSQPPPG--FSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVG---HNVQ 1150 (1391)
T ss_pred HHHHHHhcCCcc--CCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecC---CcHH
Confidence 6644 33322 12223334568999999999999999999999999999999999999999999999988 3455
Q ss_pred cchhhHHHHHHHHHHHHHHHHH-HHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccc
Q 001154 536 DGGLYLGALYFSMVIILFNGFT-EVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDP 614 (1136)
Q Consensus 536 ~~~~~~g~lf~~l~~~~~~~~~-~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~ 614 (1136)
+.+..++++|.++++...+... .......++-++||||..++|+.++|+++..++++|+.++.+++|.+++|+++||..
T Consensus 1151 ~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~ 1230 (1391)
T KOG0065|consen 1151 GLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYW 1230 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchh
Confidence 6667788888887776554443 445566788999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHH
Q 001154 615 NVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAA 694 (1136)
Q Consensus 615 ~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al 694 (1136)
++.+|+.+++..++..+....++.++.+++|+..+|..+.+++..++.+|+|+++++..||.||+|+||+||+.|..+++
T Consensus 1231 ~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gl 1310 (1391)
T KOG0065|consen 1231 TASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGL 1310 (1391)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHH
Confidence 99999999999899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCcccccCCC-------CCCchhHHHhhhcC----CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001154 695 SVNEFLGHSWDKKAGN-------SNFSLGEAILRQRS----LFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLN 758 (1136)
Q Consensus 695 ~~nef~~~~~~~~~~~-------~~~~~g~~~l~~~~----~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~ 758 (1136)
....+.+..-.|...+ ...+.|+.+...++ +..+... ....+.+.|.+.+..++.+.++|.+
T Consensus 1311 i~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a--~~~c~~c~y~v~~~~l~~f~~~y~~ 1383 (1391)
T KOG0065|consen 1311 ISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLA--TTACVYCAYTVADAFLAAFNIKYLN 1383 (1391)
T ss_pred HHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcc--eeEEEEeeeehHHHHHHHHHHHHHH
Confidence 9998887655543222 34567776665555 3222110 0111233455666666666666643
No 9
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-73 Score=698.82 Aligned_cols=777 Identities=20% Similarity=0.261 Sum_probs=407.0
Q ss_pred CCcceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCC
Q 001154 144 NRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQ 220 (1136)
Q Consensus 144 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~ 220 (1136)
.+++..||+|+|+.|++|+.++|+|||||||||+++.|.+.++|. +|+|.++|.++.++.. +..+|.|+|+|.+
T Consensus 362 sRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePvl 438 (1228)
T KOG0055|consen 362 SRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVL 438 (1228)
T ss_pred CCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechhh
Confidence 345678999999999999999999999999999999999999987 9999999999987754 5789999999976
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
|. .||+|||.|+-. ....+.+.++++... ..+. +..|++..||.||
T Consensus 439 F~-~tI~eNI~~G~~----dat~~~i~~a~k~an--------------------------a~~f---i~~lp~g~~T~vg 484 (1228)
T KOG0055|consen 439 FA-TTIRENIRYGKP----DATREEIEEAAKAAN--------------------------AHDF---ILKLPDGYDTLVG 484 (1228)
T ss_pred hc-ccHHHHHhcCCC----cccHHHHHHHHHHcc--------------------------HHHH---HHhhHHhhccccc
Confidence 55 699999998631 111112222221100 0122 3457889999999
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+... .|||||||||+|||||+.+|+|||||||||+||+.+...+.+.|++..+ |+|||+ +.|..+.+.+ +|+|++
T Consensus 485 e~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTiv-VaHRLStIrn-aD~I~v 559 (1228)
T KOG0055|consen 485 ERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIV-VAHRLSTIRN-ADKIAV 559 (1228)
T ss_pred CCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEE-Eeeehhhhhc-cCEEEE
Confidence 8766 4999999999999999999999999999999999999999999998754 667776 5677777766 999999
Q ss_pred EcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHH--HhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchh
Q 001154 381 LSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL--QEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLS 458 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (1136)
|++|+|++.|+++|++.. ..-.++.. |+.....+. ..+.... ..+.....+.+.......
T Consensus 560 ~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~~~~-------~~~~~~s~~~s~~~~~~~ 621 (1228)
T KOG0055|consen 560 MEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEEESL-------KEERSRSLKSSSSSPSLS 621 (1228)
T ss_pred EECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-cccccch-------hhhhhhcccccccccccc
Confidence 999999999999999852 01112221 111111110 0000000 000000000000000000
Q ss_pred Hhh-cCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH-------HHHHHHH---hccc
Q 001154 459 EEL-AVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIV-------ALITMTV---FFRT 527 (1136)
Q Consensus 459 ~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~-------ali~g~~---f~~~ 527 (1136)
... .........+.... ..+ . ..+..+..+.|-+...+.++.+.+...+..++. +++++.+ |+..
T Consensus 622 ~~~~~~~~~~~~~~~e~~-~~~--~-~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~ 697 (1228)
T KOG0055|consen 622 RGSNRSNLLSVKPEGEDP-EEP--V-SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPP 697 (1228)
T ss_pred CCcccccccccccccccc-ccc--c-ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC
Confidence 000 00000000000000 000 0 000012223333344444444444333333222 2333332 2211
Q ss_pred CCCCCccccchhhHHHHHHHHHHHHHHHH--HHHHHHH--------hhchhhhh--hccccccchhhHHHHHHHHhhhHH
Q 001154 528 TMHHKTIDDGGLYLGALYFSMVIILFNGF--TEVSMLV--------AKLPVLYK--HRDLHFYPSWVYTIPSWALSIPTS 595 (1136)
Q Consensus 528 ~~~~~~~~~~~~~~g~lf~~l~~~~~~~~--~~~~~~~--------~~~~v~~k--~r~~~~y~~~ay~l~~~~~~lP~~ 595 (1136)
+. +........+.++|.++....+... ......+ .+...|.+ ..+..||.---.. +.....+-.
T Consensus 698 ~~--~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~- 773 (1228)
T KOG0055|consen 698 DD--DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLAT- 773 (1228)
T ss_pred Ch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhc-
Confidence 11 1111111113333333322211110 0000000 01111111 0111122111111 110000000
Q ss_pred HHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHH------HHHHHHHhhccc
Q 001154 596 LIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFA------MLVVMALGGFII 669 (1136)
Q Consensus 596 ~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~------~l~~~l~~Gf~i 669 (1136)
=.+++....-.-+ ..+...++++.-...+|...+.=+ +.+++.++++.-
T Consensus 774 ----------------Da~~vr~~v~~rl---------~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~ 828 (1228)
T KOG0055|consen 774 ----------------DASNVRAAVGDRL---------SLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQ 828 (1228)
T ss_pred ----------------chHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000 000111111111111222221111 111111221110
Q ss_pred cCCCcchhHHHHHhhCH---HHHHHHHHHHhhhcCCcccccCCCCCCchhHHHhhhcCC-----C--CCCccHHHHHHHH
Q 001154 670 SRDSIPKWWIWGFWVSP---LMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSL-----F--PESYWYWIGVGAM 739 (1136)
Q Consensus 670 ~~~~ip~~~~w~~~isp---~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~-----~--~~~~~~w~~~g~l 739 (1136)
. .++.-.+. -.|...+..++|-..+-.+. ...+..+.+.+.+-- . ......|.+++.-
T Consensus 829 ~--------~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV----~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~ 896 (1228)
T KOG0055|consen 829 K--------KFLKGFSKDDKKAYEEASKIAIEAVSNIRTV----AALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFG 896 (1228)
T ss_pred H--------HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHH----HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000000 00111111111111100000 001111111111000 0 0001124444433
Q ss_pred HHHHHHH---HHHHHHHHHhcCCCCCc-ccccc---hhhhhhH---hhhhcCcchh------HHhhhhhhccccccCccc
Q 001154 740 LGYTLLF---NALFTFFLSYLNPLGKQ-QAVVS---KKELQER---DRRRKGENVV------IELREYLQRSSSLNGKYF 803 (1136)
Q Consensus 740 l~~~~~f---~~l~~~~l~~~~~~~~~-~~~~~---~~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 803 (1136)
+...++| .+.++++......-... ..+.. ....... ....-.++.. ..+-....+....++ .
T Consensus 897 ~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~--~ 974 (1228)
T KOG0055|consen 897 FSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDP--D 974 (1228)
T ss_pred HHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCC--C
Confidence 3322222 22222222222110000 00000 0000000 0000000000 000000000110000 0
Q ss_pred ccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCce
Q 001154 804 KQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGI 883 (1136)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~ 883 (1136)
...+...+-..-.+.++|+++.+|.. ++.++|+|+|+++++|+.+||||||||||||.+.+|-+... +
T Consensus 975 ~~~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p 1042 (1228)
T KOG0055|consen 975 STSGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--P 1042 (1228)
T ss_pred CCCCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--C
Confidence 11222233334468999999988643 56789999999999999999999999999999999987655 6
Q ss_pred eEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHc-------CC
Q 001154 884 IEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-------EL 953 (1136)
Q Consensus 884 ~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-------~l 953 (1136)
..|.|.|||++++. ..+|+.+|.|.|+|.+|. -|++||+.|+. . +++.++ +.++.+.. +|
T Consensus 1043 ~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~--~---~vs~~e----Ii~Aak~ANaH~FI~sL 1112 (1228)
T KOG0055|consen 1043 DAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS--E---EVSEEE----IIEAAKLANAHNFISSL 1112 (1228)
T ss_pred CCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC--C---CCCHHH----HHHHHHHhhhHHHHhcC
Confidence 79999999998764 457889999999999995 59999999971 1 122222 23333332 33
Q ss_pred CccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 001154 954 TSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIF 1033 (1136)
Q Consensus 954 ~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~ 1033 (1136)
.+-.|+.+|..| .+||||||||++|||||++||+||||||+||+||.++.+.|+++|.+.. .|+|.|+|+|+++ ..
T Consensus 1113 P~GyDT~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TI 1188 (1228)
T KOG0055|consen 1113 PQGYDTRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TI 1188 (1228)
T ss_pred cCcccCccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hh
Confidence 444566777655 4799999999999999999999999999999999999999999999964 6999999999976 67
Q ss_pred HhcCEEEEEecCcEEEEeCCC
Q 001154 1034 ESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1034 ~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
..+|.|.|++ +|+|++.|..
T Consensus 1189 qnaD~I~Vi~-~G~VvE~GtH 1208 (1228)
T KOG0055|consen 1189 QNADVIAVLK-NGKVVEQGTH 1208 (1228)
T ss_pred hcCCEEEEEE-CCEEEecccH
Confidence 8899999998 5899999974
No 10
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.1e-72 Score=744.45 Aligned_cols=559 Identities=24% Similarity=0.359 Sum_probs=460.5
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCH
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 226 (1136)
++.+|+|||+.++||++++|+|||||||||||++|+|+.++....+|+|.+||+++.. ..++.++||+|+|.+++.+||
T Consensus 775 ~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv 853 (1394)
T TIGR00956 775 KRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTV 853 (1394)
T ss_pred CcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCH
Confidence 3579999999999999999999999999999999999986433458999999998753 346789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+|||.|+++++.+... . . .+...+++++++.+||.+++|+.||+.. .+
T Consensus 854 ~E~L~~~a~l~~~~~~-~------~------------------------~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~ 901 (1394)
T TIGR00956 854 RESLRFSAYLRQPKSV-S------K------------------------SEKMEYVEEVIKLLEMESYADAVVGVPG-EG 901 (1394)
T ss_pred HHHHHHHHHhCCCCCC-C------H------------------------HHHHHHHHHHHHHcCChhhCCCeeCCCC-CC
Confidence 9999998776532210 0 0 0112358899999999999999999644 38
Q ss_pred CChhhhhHHHHHHHHhCCCc-EeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC-
Q 001154 307 ISGGQKKRLTTGELLVGPAR-VLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG- 384 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~-vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G- 384 (1136)
|||||||||+||++|+.+|+ +|||||||||||+.++..|++.|+++++. +.|+|+++||+...+++.||++++|++|
T Consensus 902 LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~-g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 902 LNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADH-GQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 99999999999999999997 99999999999999999999999999763 6788888888888888999999999987
Q ss_pred eEEEecCh----hhHHHHHHhcCC-CCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhH
Q 001154 385 QIVYQGPR----VSVLDFFASMGF-SCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSE 459 (1136)
Q Consensus 385 ~iv~~G~~----~~~~~~F~~~Gf-~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (1136)
+++|+|+. +++.+||+++|+ +||++.|||||+.++.+...... ...++.+.|+.+...+...+
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred EEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHH
Confidence 99999997 678999999996 99999999999999876432110 01245566666554444333
Q ss_pred hhcC---cccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 001154 460 ELAV---PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDD 536 (1136)
Q Consensus 460 ~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~ 536 (1136)
+++. +.............++|..+++.|+..+++|.++..+|++.+...|+++.+++|+++|++|++.+.+ ..+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHH
Confidence 2211 1110100001112246889999999999999999999999999999999999999999999998753 234
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhchhh-hhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeecccccc
Q 001154 537 GGLYLGALYFSMVIILFNGFTEVSMLVAKLPVL-YKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPN 615 (1136)
Q Consensus 537 ~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~-~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~ 615 (1136)
.+..+|++|+.+++..+.....++.++.+++++ +|||..++|+.++|++++++.++|+.++.+++|.+++|||+|+.++
T Consensus 1126 i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~ 1205 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPLIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWN 1205 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCc
Confidence 456688888877766555445566666777774 9999999999999999999999999999999999999999999887
Q ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHH
Q 001154 616 VVR-------FSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLM 688 (1136)
Q Consensus 616 ~~~-------f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~ 688 (1136)
+.. |+.++++.++...++.+++.++++++++..+|..+++++..++++|+||++++++||.||+|++|+||+.
T Consensus 1206 ~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1206 ASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFT 1285 (1394)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHH
Confidence 765 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCcccccCC-------------------------------C---CC----CchhHHHhhhcCCCCCCc
Q 001154 689 YAQNAASVNEFLGHSWDKKAG-------------------------------N---SN----FSLGEAILRQRSLFPESY 730 (1136)
Q Consensus 689 y~~~al~~nef~~~~~~~~~~-------------------------------~---~~----~~~g~~~l~~~~~~~~~~ 730 (1136)
|++++++.|+|.+....|... + .| ...|+++|+.+++....
T Consensus 1286 y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~- 1364 (1394)
T TIGR00956 1286 YLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSG- 1364 (1394)
T ss_pred HHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccc-
Confidence 999999999998876544220 0 01 45788999988876554
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001154 731 WYWIGVGAMLGYTLLFNALFTFFLSYL 757 (1136)
Q Consensus 731 ~~w~~~g~ll~~~~~f~~l~~~~l~~~ 757 (1136)
.|.+++++++|++++ ++.++++.|.
T Consensus 1365 -~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1365 -RWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred -cccchhhhhHHHHHH-HHHHHhhheE
Confidence 589999999998888 6666666664
No 11
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.4e-71 Score=728.64 Aligned_cols=201 Identities=28% Similarity=0.424 Sum_probs=177.7
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCCcH
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
+.+|+||||.|++||++||+||||||||||+++|+|... +.+|+|.++|+++.. ...++.+|||+|++.+++.+|+
T Consensus 1952 ~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv 2029 (2272)
T TIGR01257 1952 SPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTG 2029 (2272)
T ss_pred ceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEECcchHHHHhhhEEEEeccccCCCCCCH
Confidence 679999999999999999999999999999999999877 468999999988642 2345679999999999999999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+|++.+.+.++. .+.++.++.++++++.++|.+..+..+ +.|||||||||+||+||+.+|+||||||||+||
T Consensus 2030 ~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGqKqRLslA~ALi~~P~VLLLDEPTsGL 2101 (2272)
T TIGR01257 2030 REHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGM 2101 (2272)
T ss_pred HHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCC
Confidence 999998776653 223344566889999999988887765 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+.+++.+++.|++++++|+|||+|||+++ ++...|||+++|. +|++++.|+.
T Consensus 2102 Dp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~-~G~i~~~Gs~ 2154 (2272)
T TIGR01257 2102 DPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMV-KGAFQCLGTI 2154 (2272)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 999999999999999878999999999986 5777899999998 5899999975
No 12
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-72 Score=707.49 Aligned_cols=756 Identities=21% Similarity=0.255 Sum_probs=405.4
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1136)
.+.|+|||+.|++|++++|+||.|||||+||.+|.|.++. .+|+|.++| .++||||++|.+ +.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~---~sG~v~v~g----------siaYv~Q~pWI~-ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPK---LSGSVAVNG----------SVAYVPQQPWIQ-NGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccc---ccceEEEcC----------eEEEeccccHhh-CCcHH
Confidence 3489999999999999999999999999999999999875 499999999 599999999955 56999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 001154 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1136)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~L 307 (1136)
|||.|+..+. ..+|+.+.++|.++++..+.|.+| .|.||++++ +|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-nL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-NL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-CC
Confidence 9999987654 578999999999988887777776 499998776 79
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001154 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1136)
Q Consensus 308 SGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 387 (1136)
||||||||++|||++.+++|++||+|.|++|+++..+|++.+-. ..++++|+|.++| .-+....+|.|++|++|+|.
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~--~~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I~ 721 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIR--GLLRGKTVILVTH-QLQFLPHADQIIVLKDGKIV 721 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHH--hhhcCCEEEEEeC-chhhhhhCCEEEEecCCeEe
Confidence 99999999999999999999999999999999999999986552 2345555665666 55778889999999999999
Q ss_pred EecChhhHHH---HHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcCc
Q 001154 388 YQGPRVSVLD---FFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVP 464 (1136)
Q Consensus 388 ~~G~~~~~~~---~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1136)
..|+.+++++ +|+++ +.+....++.. .....+......... +. +.........+. ..
T Consensus 722 ~~Gty~el~~~~~~~~~l-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~- 781 (1381)
T KOG0054|consen 722 ESGTYEELLKSGGDFAEL-------------AHEEESEQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEK-SK- 781 (1381)
T ss_pred cccCHHHHHhcchhHHHH-------------hhccchhhccc---cccccccccccccch-hh-hhhhhhcccccc-cc-
Confidence 9999999983 33322 00000000000 000000000000000 00 000000000000 00
Q ss_pred ccccCCCcCccCC---CCCCCcHHHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHHHHHHHHhc-ccCCCCC--cc---
Q 001154 465 FDRRFNHPAALST---SKYGEKRSELLKTSFNWQLLLMKRNSFIYV-FKFIQLLIVALITMTVFF-RTTMHHK--TI--- 534 (1136)
Q Consensus 465 ~~~~~~~~~~~~~---~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~-~~~~~~~~~ali~g~~f~-~~~~~~~--~~--- 534 (1136)
..+. .+..... ...+.- .....+.+........... ..+.+.....+.+++-|| ..+.+.. ..
T Consensus 782 ~~~~--~~~~~~~~ee~~~G~v-----~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~ 854 (1381)
T KOG0054|consen 782 DEKE--EEDKLVQEEERETGKV-----SWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTT 854 (1381)
T ss_pred cccc--hhhHHHHHHHHhcCEe-----eHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC
Confidence 0000 0000000 000100 0111122222211111111 112222222223333222 2221111 11
Q ss_pred ccchhhHHHHHHHHHHHH-HHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeecccc
Q 001154 535 DDGGLYLGALYFSMVIIL-FNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYD 613 (1136)
Q Consensus 535 ~~~~~~~g~lf~~l~~~~-~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~ 613 (1136)
.+...|.++..+..+... +..+..+..+...... .|..| -.+-..+..-|++++.+.--.
T Consensus 855 ~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~a---S~~Lh------~~ml~~Ilrapm~FFdtTP~G---------- 915 (1381)
T KOG0054|consen 855 VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKA---SRKLH------DKLLNSILRAPMSFFDTTPTG---------- 915 (1381)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH------HHHHHHHHhCcchhcCCCCcc----------
Confidence 122233332211111111 1111111111110000 00000 001122223333333221111
Q ss_pred ccHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhh----
Q 001154 614 PNVVRFSRQLL-----LYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWV---- 684 (1136)
Q Consensus 614 ~~~~~f~~~~l-----~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~i---- 684 (1136)
+-..||....- +-+.+..+...+..+++.+.-...+ +....+..+++.+ . .++.-.||+
T Consensus 916 RILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~-~P~fli~~~pl~v--~---------~~~~~~~Y~~tsR 983 (1381)
T KOG0054|consen 916 RILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYV-TPWFLIAIIPLGV--I---------YYFVQRYYLATSR 983 (1381)
T ss_pred chhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHH-hHHHHHHHHHHHH--H---------HHHHHHHHHHHhH
Confidence 11234433321 1111111111111111111100000 0000000000000 0 011111221
Q ss_pred ----------CHHHHHHHHHHHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCCcc------HHHHHHH-HHHHHHHHH
Q 001154 685 ----------SPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYW------YWIGVGA-MLGYTLLFN 747 (1136)
Q Consensus 685 ----------sp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~------~w~~~g~-ll~~~~~f~ 747 (1136)
||++--+ +|-.........-+.....-.......+.....++ .|.++-. +++..+++.
T Consensus 984 eLkRLesitRSPi~sh~-----~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~ 1058 (1381)
T KOG0054|consen 984 ELKRLESITRSPIYSHF-----SETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLI 1058 (1381)
T ss_pred HHHHhhhcccchHHHhH-----HHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221111 11111101111001111111111111121111111 2444332 112222222
Q ss_pred HHHHHHHHhcCCCCCccccc--c-----------------hhhhhhHhhhhcCcchhHHhhhhhhccccccCcccccCCc
Q 001154 748 ALFTFFLSYLNPLGKQQAVV--S-----------------KKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGM 808 (1136)
Q Consensus 748 ~l~~~~l~~~~~~~~~~~~~--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1136)
..+...+..-.....+.... + +.+.+....++..+......+.+.......+++.||..|
T Consensus 1059 ~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G- 1137 (1381)
T KOG0054|consen 1059 AALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKG- 1137 (1381)
T ss_pred HHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCC-
Confidence 11111111111010111000 0 000000000000000000000000001111344677776
Q ss_pred ccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEE
Q 001154 809 VLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDI 888 (1136)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i 888 (1136)
.+.|+|++..+. .+-..+|+|||++|+|||++||||++|||||||+++|.+... +.+|+|
T Consensus 1138 -------~I~f~~~~~RYr-----------p~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I 1197 (1381)
T KOG0054|consen 1138 -------EIEFEDLSLRYR-----------PNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEI 1197 (1381)
T ss_pred -------eEEEEEeEEEeC-----------CCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeE
Confidence 456666654432 133579999999999999999999999999999999999876 468999
Q ss_pred EEcCccCCh---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcccc-------
Q 001154 889 YISGYPKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSG------- 958 (1136)
Q Consensus 889 ~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~------- 958 (1136)
.|||.++.+ .+.|++++.+||+|.+|.+ |+|.||. +..+..++.++++++.++|.+.-.
T Consensus 1198 ~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG-TvR~NLD----------Pf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld 1266 (1381)
T KOG0054|consen 1198 LIDGVDISKIGLHDLRSRLSIIPQDPVLFSG-TVRFNLD----------PFDEYSDDEIWEALERCQLKDVVSSLPGGLD 1266 (1381)
T ss_pred EEcCeecccccHHHHHhcCeeeCCCCceecC-ccccccC----------cccccCHHHHHHHHHHhChHHHHhhCCcCCC
Confidence 999998764 5678999999999999976 8888883 334445667899999998865432
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCE
Q 001154 959 ALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDE 1038 (1136)
Q Consensus 959 ~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~ 1038 (1136)
..+. .++.++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+-. +++|||+|+|+.+ ....+||
T Consensus 1267 ~~v~-egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTVltIAHRl~--TVmd~Dr 1342 (1381)
T KOG0054|consen 1267 SEVS-EGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTVLTIAHRLN--TVMDSDR 1342 (1381)
T ss_pred ceec-CCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeEEEEeeccc--hhhhcCe
Confidence 2222 3456899999999999999999999999999999999999999999999854 6899999999976 5567899
Q ss_pred EEEEecCcEEEEeCCCC
Q 001154 1039 LLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 1039 ~~~l~~gG~~~~~g~~~ 1055 (1136)
|+||++ |+++++|.+.
T Consensus 1343 VlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1343 VLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred EEEeeC-CeEeecCChH
Confidence 999985 7999988764
No 13
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.4e-67 Score=702.37 Aligned_cols=211 Identities=22% Similarity=0.297 Sum_probs=175.6
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEec
Confidence 5788888876631 22469999999999999999999999999999999999876 5689999999987
Q ss_pred Ch---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 001154 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1136)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1136)
+. ..+|+.++||||++.++.+ |++|||.+.. +. .++.++++++..++.+. .|..++..
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~- 1371 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEA- 1371 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCC-
Confidence 54 5678899999999999976 9999996531 11 23446778887777543 23444433
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
+.+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|+||++
T Consensus 1372 G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~- 1447 (1622)
T PLN03130 1372 GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA- 1447 (1622)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999874 5899999999965 5677999999984
Q ss_pred cEEEEeCCCC
Q 001154 1046 GELIYAGPLG 1055 (1136)
Q Consensus 1046 G~~~~~g~~~ 1055 (1136)
|+++..|+..
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 8999999753
No 14
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.2e-67 Score=695.41 Aligned_cols=210 Identities=21% Similarity=0.288 Sum_probs=175.0
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 5788888877631 22469999999999999999999999999999999999876 5689999999986
Q ss_pred Ch---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------cccccCCC
Q 001154 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1136)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~~~~~ 965 (1136)
.+ ..+|+.++||||++.++++ |++|||.+.. +. .++.++++++..++.+.. |..++..
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~----sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1368 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EH----NDADLWEALERAHIKDVIDRNPFGLDAEVSEG- 1368 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CC----CHHHHHHHHHHcCCHHHHHhCcCCCCceecCC-
Confidence 53 5678899999999999976 9999996431 11 223467788887775432 3444433
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
+.+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|+ +
T Consensus 1369 G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~-~ 1444 (1495)
T PLN03232 1369 GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLS-S 1444 (1495)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999864 5899999999965 567799999998 4
Q ss_pred cEEEEeCCC
Q 001154 1046 GELIYAGPL 1054 (1136)
Q Consensus 1046 G~~~~~g~~ 1054 (1136)
|+++..|+.
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 899999975
No 15
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=7.7e-67 Score=603.92 Aligned_cols=474 Identities=26% Similarity=0.333 Sum_probs=357.4
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC-cceeeEEEECCccCCCCCC-------CceEEEEeccCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1136)
..+++||||++.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++|++|++.
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999876 4568999999987644322 367999999974
Q ss_pred --CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccc
Q 001154 220 --QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1136)
Q Consensus 220 --~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt 297 (1136)
+-|-+||.+.|.-..+.++... ..+...++.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 4566899988876555443221 01123458889999999987654
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
+.+...|||||||||.||+||+.+|++|++||||++||+.++.+|.+.|+++.++. ++.++.++|+..-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~-g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQREL-GMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHc-CcEEEEEcCCHHHHHHhcCe
Confidence 56788999999999999999999999999999999999999999999999998764 67777899999999999999
Q ss_pred EEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccch
Q 001154 378 VILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1136)
Q Consensus 378 vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (1136)
|+||.+|++++.|+.+++..- +.+||.. . +
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~---------------------------------p~hpYT~---~-L------------- 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN---------------------------------PQHPYTR---G-L------------- 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc---------------------------------cCCcccH---H-H-------------
Confidence 999999999999999988531 1112210 0 0
Q ss_pred hHhhcCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccc
Q 001154 458 SEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 537 (1136)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~ 537 (1136)
+.
T Consensus 255 ---l~--------------------------------------------------------------------------- 256 (539)
T COG1123 255 ---LA--------------------------------------------------------------------------- 256 (539)
T ss_pred ---Hh---------------------------------------------------------------------------
Confidence 00
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHH
Q 001154 538 GLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVV 617 (1136)
Q Consensus 538 ~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~ 617 (1136)
..|.....+.
T Consensus 257 ---------------------------a~p~~~~~~~------------------------------------------- 266 (539)
T COG1123 257 ---------------------------AVPRLGDEKI------------------------------------------- 266 (539)
T ss_pred ---------------------------hCCCcccccc-------------------------------------------
Confidence 0000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHh
Q 001154 618 RFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVN 697 (1136)
Q Consensus 618 ~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~n 697 (1136)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhh
Q 001154 698 EFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDR 777 (1136)
Q Consensus 698 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 777 (1136)
.+. +
T Consensus 267 -----~~~---~-------------------------------------------------------------------- 270 (539)
T COG1123 267 -----IRL---P-------------------------------------------------------------------- 270 (539)
T ss_pred -----ccc---c--------------------------------------------------------------------
Confidence 000 0
Q ss_pred hhcCcchhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcE
Q 001154 778 RRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVL 857 (1136)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~ 857 (1136)
. .. . .. ...-++.+|++-.+.....+. ....+...+++||||++++||+
T Consensus 271 ----------~------~~--~----~~-------~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~ 319 (539)
T COG1123 271 ----------R------RG--P----LR-------AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGET 319 (539)
T ss_pred ----------c------cc--c----cc-------cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCE
Confidence 0 00 0 00 000011122211111100000 0001346789999999999999
Q ss_pred EEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC--C---hhcccceEEEeccCC--CCCCCCcHHHHHHHHhhhc
Q 001154 858 TALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK--R---QETFARISGYCEQND--IHSPGLTVLESLLFSAWLR 930 (1136)
Q Consensus 858 ~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~--~~~~~ltv~e~l~~~~~lr 930 (1136)
+||||+||||||||.++|+|+.+ +.+|.|.++|.+. . ....++.+-+++|++ .+.|.+||.+.+.-.....
T Consensus 320 lglVGeSGsGKSTlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~ 397 (539)
T COG1123 320 LGLVGESGSGKSTLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIH 397 (539)
T ss_pred EEEECCCCCCHHHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhh
Confidence 99999999999999999999987 4689999999762 1 123455677788875 5779999999997655443
Q ss_pred CCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHH
Q 001154 931 LPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMR 1009 (1136)
Q Consensus 931 ~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~ 1009 (1136)
... ...+.++++.++++.++|.. ..+++ +.+||||||||++|||||+.+|++|++|||||.||+..++.|.+
T Consensus 398 ~~~--~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~Vln 470 (539)
T COG1123 398 GGG--SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLN 470 (539)
T ss_pred ccc--chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHH
Confidence 322 24556678999999999985 33433 46899999999999999999999999999999999999999999
Q ss_pred HHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1010 TVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1010 ~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|+++.++ |.|.|+||||... +...|||++||. .|+++..||.
T Consensus 471 Ll~~lq~e~g~t~lfISHDl~v-V~~i~drv~vm~-~G~iVE~G~~ 514 (539)
T COG1123 471 LLKDLQEELGLTYLFISHDLAV-VRYIADRVAVMY-DGRIVEEGPT 514 (539)
T ss_pred HHHHHHHHhCCEEEEEeCCHHH-HHhhCceEEEEE-CCeEEEeCCH
Confidence 99999765 9999999999864 677899999998 5899999975
No 16
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.8e-65 Score=683.83 Aligned_cols=210 Identities=20% Similarity=0.235 Sum_probs=175.1
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEEc
Confidence 5788888877632 12369999999999999999999999999999999999876 5689999999987
Q ss_pred Ch---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 001154 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1136)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1136)
+. ..+|+.++||||++.++.+ |++|||.... +.+ ++.++++++.+++.+. .|..++..
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~- 1418 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG- 1418 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC-
Confidence 54 5678899999999999976 9999995211 111 2346778888877543 24444443
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
+.+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....+|+|++|+ +
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld-~ 1494 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLD-K 1494 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999864 5899999999965 567899999998 5
Q ss_pred cEEEEeCCC
Q 001154 1046 GELIYAGPL 1054 (1136)
Q Consensus 1046 G~~~~~g~~ 1054 (1136)
|+++..|+.
T Consensus 1495 G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 GEVAEFGAP 1503 (1522)
T ss_pred CEEEEECCH
Confidence 899999985
No 17
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=9.7e-65 Score=669.19 Aligned_cols=216 Identities=20% Similarity=0.308 Sum_probs=176.1
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc-------------
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------------- 882 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------------- 882 (1136)
.+.|+||+|.++.. ++.++|+|+||+|+||+++||+||||||||||+++|.|...+.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 58888988877421 2346999999999999999999999999999999999976531
Q ss_pred ---------------------------------------eeEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCcHH
Q 001154 883 ---------------------------------------IIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVL 920 (1136)
Q Consensus 883 ---------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ltv~ 920 (1136)
+.+|+|++||.++++ ..+++.+|||+|++.+|. .|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHH
Confidence 148999999998753 567889999999999985 6999
Q ss_pred HHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 921 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
||+.|+. + +.+. +.++++++..++.+ -.|+.+|.. +..||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999862 1 2222 33666777666544 335666643 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCEEEEEecC---cE-EEEeCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRG---GE-LIYAGPL 1054 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~-~~g~tii~~~H~~~~~~~~~~d~~~~l~~g---G~-~~~~g~~ 1054 (1136)
||||+||+.+.+.|++.|+++. .+++|+|+|+|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 36899999999975 57889999999872 66 5578874
No 18
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-65 Score=621.30 Aligned_cols=461 Identities=22% Similarity=0.322 Sum_probs=345.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
+.+|+|+|++|++|++++|+|||||||||||++|+|.+++. +.+|+|.++|.++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 36999999999999999999999999999999999998751 249999999998754321 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.|+......+. .+ . .....+++++++.+||++..+..++
T Consensus 97 ~tv~e~l~~~~~~~~~~~-~~-----------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-MD-----------------Y-------------DAMYLRAQKLLAQLKLDINPATPVG--- 142 (506)
T ss_pred CcHHHHhhhcccccccCC-cC-----------------H-------------HHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999988643210000 00 0 0012247788999999877776654
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++. +++|+.++|+..++..+||+|++|++
T Consensus 143 --~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 143 --NLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAH--GIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 59999999999999999999999999999999999999999999998653 45667788999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcC
Q 001154 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1136)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1136)
|++++.|+.+++.. .+ ..+
T Consensus 219 G~i~~~~~~~~~~~---------------~~-----------------------------~~~----------------- 237 (506)
T PRK13549 219 GRHIGTRPAAGMTE---------------DD-----------------------------IIT----------------- 237 (506)
T ss_pred CEEeeecccccCCH---------------HH-----------------------------HHH-----------------
Confidence 99998886432100 00 000
Q ss_pred cccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHH
Q 001154 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1136)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 543 (1136)
. +.... .
T Consensus 238 -------------------------------~----------------------------~~~~~-----~--------- 244 (506)
T PRK13549 238 -------------------------------M----------------------------MVGRE-----L--------- 244 (506)
T ss_pred -------------------------------H----------------------------hhCcC-----c---------
Confidence 0 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHH
Q 001154 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1136)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1136)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCc
Q 001154 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1136)
Q Consensus 624 l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 703 (1136)
.. ..|
T Consensus 245 ----------------------------------------------~~-~~~---------------------------- 249 (506)
T PRK13549 245 ----------------------------------------------TA-LYP---------------------------- 249 (506)
T ss_pred ----------------------------------------------cc-ccc----------------------------
Confidence 00 000
Q ss_pred ccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001154 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1136)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1136)
.
T Consensus 250 ------~------------------------------------------------------------------------- 250 (506)
T PRK13549 250 ------R------------------------------------------------------------------------- 250 (506)
T ss_pred ------c-------------------------------------------------------------------------
Confidence 0
Q ss_pred hhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEcc
Q 001154 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1136)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1136)
. .. . .. ...+.++|+++.++. .+++.+|+||||+|++||++||+||
T Consensus 251 ----~------~~--~----~~--------~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~G~ 296 (506)
T PRK13549 251 ----E------PH--T----IG--------EVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIAGL 296 (506)
T ss_pred ----c------cc--C----CC--------CceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEeCC
Confidence 0 00 0 00 001233333322210 0234589999999999999999999
Q ss_pred CCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCC---CCCCCCcHHHHHHHHhhhcCC--Cc
Q 001154 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLP--SE 934 (1136)
Q Consensus 864 nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~ltv~e~l~~~~~lr~~--~~ 934 (1136)
||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|++ .+++.+|+.||+.+....... ..
T Consensus 297 NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 375 (506)
T PRK13549 297 VGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSR 375 (506)
T ss_pred CCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcc
Confidence 999999999999998652 258999999987532 12345689999985 467889999999875321110 00
Q ss_pred ccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 001154 935 IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRN 1013 (1136)
Q Consensus 935 ~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1013 (1136)
......++.++++++.+++. +..+..+ ..|||||||||+|||||+.+|+||||||||+|||+.++..+++.|++
T Consensus 376 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~ 450 (506)
T PRK13549 376 IDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQ 450 (506)
T ss_pred cChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHH
Confidence 12233445688999999995 4555543 47999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCc
Q 001154 1014 IVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1136)
Q Consensus 1014 l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1136)
++++|+|||++|||++ ++.+.||++++|.+ |+++..|+..+.
T Consensus 451 l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 492 (506)
T PRK13549 451 LVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHNL 492 (506)
T ss_pred HHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccccC
Confidence 9888999999999986 57788999999985 789988876544
No 19
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-65 Score=618.70 Aligned_cols=458 Identities=20% Similarity=0.299 Sum_probs=343.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 36999999999999999999999999999999999998876 9999999988754322 2469999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.++...... .+.. .. . + ..+...+++++++.+||.+..++.++
T Consensus 95 ~tv~e~l~~~~~~~~~--~~~~-~~----------~-~-------------~~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTKK--VCGV-NI----------I-D-------------WREMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhccccccc--cccc-cc----------c-C-------------HHHHHHHHHHHHHHcCCCCCcccchh---
Confidence 9999999875321000 0000 00 0 0 00012347888999999887776664
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++..+||+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE--GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 59999999999999999999999999999999999999999999998753 45666788999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcC
Q 001154 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1136)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1136)
|++++.|+++++.. .+ ..+.
T Consensus 221 G~i~~~g~~~~~~~---------------~~-----------------------------~~~~---------------- 240 (510)
T PRK09700 221 GSSVCSGMVSDVSN---------------DD-----------------------------IVRL---------------- 240 (510)
T ss_pred CEEeeecchhhCCH---------------HH-----------------------------HHHH----------------
Confidence 99999886543210 00 0000
Q ss_pred cccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHH
Q 001154 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1136)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 543 (1136)
+.... .
T Consensus 241 ------------------------------------------------------------~~~~~-----~--------- 246 (510)
T PRK09700 241 ------------------------------------------------------------MVGRE-----L--------- 246 (510)
T ss_pred ------------------------------------------------------------hcCCC-----c---------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHH
Q 001154 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1136)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1136)
.
T Consensus 247 ---------------------------------------------------------------------~---------- 247 (510)
T PRK09700 247 ---------------------------------------------------------------------Q---------- 247 (510)
T ss_pred ---------------------------------------------------------------------c----------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCc
Q 001154 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1136)
Q Consensus 624 l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 703 (1136)
+ .+
T Consensus 248 ----------------------------------------------~---------------------------~~---- 250 (510)
T PRK09700 248 ----------------------------------------------N---------------------------RF---- 250 (510)
T ss_pred ----------------------------------------------c---------------------------cc----
Confidence 0 00
Q ss_pred ccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001154 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1136)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1136)
. . .
T Consensus 251 -~----~--------------~---------------------------------------------------------- 253 (510)
T PRK09700 251 -N----A--------------M---------------------------------------------------------- 253 (510)
T ss_pred -c----c--------------c----------------------------------------------------------
Confidence 0 0 0
Q ss_pred hhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEcc
Q 001154 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1136)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1136)
.+ ... . +. .+..+.++|++.. +. .+|+|+||+|++||++||+||
T Consensus 254 ----~~-----~~~-~----~~-------~~~~l~~~~l~~~-------------~~--~~l~~isl~i~~Ge~~~l~G~ 297 (510)
T PRK09700 254 ----KE-----NVS-N----LA-------HETVFEVRNVTSR-------------DR--KKVRDISFSVCRGEILGFAGL 297 (510)
T ss_pred ----cc-----ccc-c----CC-------CCcEEEEeCcccc-------------CC--CcccceeEEEcCCcEEEEECC
Confidence 00 000 0 00 0001334444321 11 379999999999999999999
Q ss_pred CCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccC---CCCCCCCcHHHHHHHHhhhc---CCC
Q 001154 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQN---DIHSPGLTVLESLLFSAWLR---LPS 933 (1136)
Q Consensus 864 nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~~ltv~e~l~~~~~lr---~~~ 933 (1136)
||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|+ ..+++.+||+||+.+....+ ...
T Consensus 298 NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 375 (510)
T PRK09700 298 VGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKG 375 (510)
T ss_pred CCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccc
Confidence 99999999999999876 468999999986532 1234578999998 45788999999998753211 000
Q ss_pred --c-ccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHH
Q 001154 934 --E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMR 1009 (1136)
Q Consensus 934 --~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~ 1009 (1136)
. ......++.++++++.+++. +..+..+ ..|||||||||+|||+|+.+|+||||||||+|||+.++..+++
T Consensus 376 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~ 450 (510)
T PRK09700 376 AMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYK 450 (510)
T ss_pred cccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHH
Confidence 0 01222335578899999996 5666543 4799999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1010 TVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1010 ~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
.|++++++|.|||++|||+. .+.+.||++++|++ |+++..++.
T Consensus 451 ~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 451 VMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999878999999999986 57788999999985 788888765
No 20
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.6e-65 Score=615.92 Aligned_cols=451 Identities=20% Similarity=0.307 Sum_probs=343.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC----CCceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1136)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999876 999999998875322 13569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.|+.........++ . .....+++++++.+||.+..|..++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~~---~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRID---W---------------------------KKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccccCccC---H---------------------------HHHHHHHHHHHHHcCCCCCccCchh---
Confidence 999999988643210000000 0 0012247788999999887776655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++.. +++|+.++|+.+++..+||+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQ--GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 59999999999999999999999999999999999999999999998653 55677788999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcC
Q 001154 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1136)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1136)
|+++..|+.+++.. ....+.+
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHh---------------
Confidence 99998775432100 0000000
Q ss_pred cccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHH
Q 001154 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1136)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 543 (1136)
+...
T Consensus 238 -------------------------------------------------------------~~~~--------------- 241 (501)
T PRK10762 238 -------------------------------------------------------------VGRK--------------- 241 (501)
T ss_pred -------------------------------------------------------------cCCC---------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHH
Q 001154 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1136)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1136)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCc
Q 001154 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1136)
Q Consensus 624 l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 703 (1136)
..
T Consensus 242 --------------------------------------------------~~---------------------------- 243 (501)
T PRK10762 242 --------------------------------------------------LE---------------------------- 243 (501)
T ss_pred --------------------------------------------------cc----------------------------
Confidence 00
Q ss_pred ccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001154 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1136)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1136)
...+.
T Consensus 244 --~~~~~------------------------------------------------------------------------- 248 (501)
T PRK10762 244 --DQYPR------------------------------------------------------------------------- 248 (501)
T ss_pred --ccccc-------------------------------------------------------------------------
Confidence 00000
Q ss_pred hhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEcc
Q 001154 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1136)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1136)
. .. . + .+..+.++|++ ..+|+|+||+|++||++||+||
T Consensus 249 ----~------~~--~----~--------~~~~l~~~~l~------------------~~~l~~vsl~i~~Ge~~~liG~ 286 (501)
T PRK10762 249 ----L------DK--A----P--------GEVRLKVDNLS------------------GPGVNDVSFTLRKGEILGVSGL 286 (501)
T ss_pred ----c------cc--C----C--------CCcEEEEeCcc------------------cCCcccceEEEcCCcEEEEecC
Confidence 0 00 0 0 00013333332 1258899999999999999999
Q ss_pred CCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCC---CCCCCCcHHHHHHHHhhhcCC---C
Q 001154 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRLP---S 933 (1136)
Q Consensus 864 nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~ltv~e~l~~~~~lr~~---~ 933 (1136)
||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++ .+++.+|+.|++.+....... .
T Consensus 287 NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 364 (501)
T PRK10762 287 MGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGG 364 (501)
T ss_pred CCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhccccc
Confidence 99999999999999876 468999999987532 12345699999995 577889999999875311100 0
Q ss_pred cccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 001154 934 EIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1136)
Q Consensus 934 ~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1136)
.....+.++.++++++.+++. +..+..+ ..|||||||||+|||||+.+|+||||||||+|||+.++..+.+.|+
T Consensus 365 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 439 (501)
T PRK10762 365 SLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLIN 439 (501)
T ss_pred ccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHH
Confidence 012223345678899999994 5555543 4799999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCc
Q 001154 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1136)
Q Consensus 1013 ~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1136)
+++++|.|||++|||++ .+.+.||++++|++ |+++..|+....
T Consensus 440 ~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 482 (501)
T PRK10762 440 QFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQA 482 (501)
T ss_pred HHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEeccccC
Confidence 99878999999999986 57788999999984 789988877543
No 21
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-64 Score=625.37 Aligned_cols=488 Identities=20% Similarity=0.249 Sum_probs=348.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCC----------CCC-------CCce
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK----------EFV-------PPRT 210 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~----------~~~-------~~~~ 210 (1136)
.++|+||||++++|++++|+|||||||||||++|+|.++|. +|+|.++|..+. ... ..+.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999876 899999986431 100 1246
Q ss_pred EEEEeccC--CCCCCCCHHHHHHHhhhhc-CCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHH
Q 001154 211 SAYVSQQD--WQVAEMTVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMK 287 (1136)
Q Consensus 211 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~ 287 (1136)
++||+|++ .+++.+||.||+.++.+.. +.. + .+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS-R---------------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 99999997 5788899999999875432 110 0 001234788899
Q ss_pred HhCCcc---cccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEE
Q 001154 288 ILGLDT---CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISL 364 (1136)
Q Consensus 288 ~lgL~~---~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~ 364 (1136)
.+||++ ..+.. +..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++.. +++||.+
T Consensus 152 ~~gL~~~~~~~~~~-----~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSRY-----PHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHhCC-----CccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 24444 45699999999999999999999999999999999999999999999987643 4567778
Q ss_pred ecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHH
Q 001154 365 LQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKF 444 (1136)
Q Consensus 365 ~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 444 (1136)
+|+..++.++||+|++|++|++++.|+++++.. -|.+....+++..+
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~~~------------------------- 272 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLAAV------------------------- 272 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhhcc-------------------------
Confidence 999999999999999999999999998765421 00000000000000
Q ss_pred HHHHHhCccccchhHhhcCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh
Q 001154 445 AEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVF 524 (1136)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f 524 (1136)
+
T Consensus 273 -------------------~------------------------------------------------------------ 273 (623)
T PRK10261 273 -------------------P------------------------------------------------------------ 273 (623)
T ss_pred -------------------C------------------------------------------------------------
Confidence 0
Q ss_pred cccCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhh
Q 001154 525 FRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVA 604 (1136)
Q Consensus 525 ~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~ 604 (1136)
... . . .+ +. .|
T Consensus 274 -~~~---~-~-~~-----------------------------------~~-----------------~~----------- 284 (623)
T PRK10261 274 -QLG---A-M-KG-----------------------------------LD-----------------YP----------- 284 (623)
T ss_pred -ccc---c-c-cc-----------------------------------cc-----------------CC-----------
Confidence 000 0 0 00 00 00
Q ss_pred eeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhh
Q 001154 605 VTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWV 684 (1136)
Q Consensus 605 i~Y~~~g~~~~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~i 684 (1136)
...+.
T Consensus 285 -------------------------------------------------------------------~~~~~-------- 289 (623)
T PRK10261 285 -------------------------------------------------------------------RRFPL-------- 289 (623)
T ss_pred -------------------------------------------------------------------ccccc--------
Confidence 00000
Q ss_pred CHHHHHHHHHHHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 001154 685 SPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQ 764 (1136)
Q Consensus 685 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~ 764 (1136)
. ....+. ...
T Consensus 290 ---------------~---~~~~~~--------------------------------------------------~~~-- 299 (623)
T PRK10261 290 ---------------I---SLEHPA--------------------------------------------------KQE-- 299 (623)
T ss_pred ---------------c---cccccc--------------------------------------------------ccC--
Confidence 0 000000 000
Q ss_pred cccchhhhhhHhhhhcCcchhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEE
Q 001154 765 AVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQL 844 (1136)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (1136)
. . . . .. . .+. + ..-+..+|+++.++..... .....+...+
T Consensus 300 ---~--------------~-~--~------~~--~---~~~-~------~~~L~~~~l~~~y~~~~~~--~~~~~~~~~~ 339 (623)
T PRK10261 300 ---P--------------P-I--E------QD--T---VVD-G------EPILQVRNLVTRFPLRSGL--LNRVTREVHA 339 (623)
T ss_pred ---c--------------c-c--c------cc--c---ccC-C------CceEEEeeeEEEEcCCCcc--ccccCCceEE
Confidence 0 0 0 0 00 0 000 0 0124555655544210000 0000013579
Q ss_pred EeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCC--CCCCC
Q 001154 845 LVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHSPG 916 (1136)
Q Consensus 845 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~~~ 916 (1136)
|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++ .+++.
T Consensus 340 l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~ 417 (623)
T PRK10261 340 VEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPR 417 (623)
T ss_pred EeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCC
Confidence 999999999999999999999999999999999876 468999999986532 12456799999997 57889
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
+||.|++.+....+.. ....+.++.+.++++.++|. ...+..+ .+|||||||||+|||||+.+|+|||||||
T Consensus 418 ~tv~~~l~~~~~~~~~--~~~~~~~~~~~~~L~~~gL~~~~~~~~~-----~~LSgGqrQRv~iAraL~~~p~llllDEP 490 (623)
T PRK10261 418 QTVGDSIMEPLRVHGL--LPGKAAAARVAWLLERVGLLPEHAWRYP-----HEFSGGQRQRICIARALALNPKVIIADEA 490 (623)
T ss_pred CCHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999876433211 12233456788999999995 4555443 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|+|||+.++..++++|++++++ |.|||++|||++ .+...+|++++|.+ |++++.|+..
T Consensus 491 ts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 491 VSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 9999999999999999999765 999999999986 46778999999985 7999988753
No 22
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.6e-64 Score=613.47 Aligned_cols=464 Identities=21% Similarity=0.293 Sum_probs=341.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCCCC-------CceEEEEeccC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQD 218 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 218 (1136)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.+++. .+.+|+|.++|.++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999998752 1248999999998754321 24799999996
Q ss_pred C--CCCCCCHHHHHHHhhhhc-CCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc--
Q 001154 219 W--QVAEMTVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-- 293 (1136)
Q Consensus 219 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~-- 293 (1136)
. +++.+||+|++.+..... +.. + .....+++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR-R---------------------------------EAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHCCCCChH
Confidence 4 567789999987643211 100 0 001234788899999975
Q ss_pred -cccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHH
Q 001154 294 -CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAY 372 (1136)
Q Consensus 294 -~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~ 372 (1136)
..+..+ ..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++.. +.+||.++|+..++.
T Consensus 148 ~~~~~~~-----~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYP-----HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQEL-NMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhCC-----cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhc-CCeEEEEcCcHHHHH
Confidence 245544 4699999999999999999999999999999999999999999999987543 456667889999999
Q ss_pred hhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCc
Q 001154 373 ELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYH 452 (1136)
Q Consensus 373 ~~~D~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (1136)
.+||+|++|++|++++.|+.+++... |.. ...
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~---------------------------------~~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH---------------------------------PYT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC---------------------------------HHH-------
Confidence 99999999999999999876544210 000 000
Q ss_pred cccchhHhhcCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 001154 453 TGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHK 532 (1136)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~ 532 (1136)
+.+ +...
T Consensus 254 -----------------------------------------~~~----------------------------~~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QKL----------------------------LNSE---- 260 (529)
T ss_pred -----------------------------------------HHH----------------------------HHhC----
Confidence 000 0000
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccc
Q 001154 533 TIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGY 612 (1136)
Q Consensus 533 ~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~ 612 (1136)
|
T Consensus 261 ------------------------------------------------------------~------------------- 261 (529)
T PRK15134 261 ------------------------------------------------------------P------------------- 261 (529)
T ss_pred ------------------------------------------------------------c-------------------
Confidence 0
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHH
Q 001154 613 DPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQN 692 (1136)
Q Consensus 613 ~~~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~ 692 (1136)
.
T Consensus 262 ----------------------------------------------------------~--------------------- 262 (529)
T PRK15134 262 ----------------------------------------------------------S--------------------- 262 (529)
T ss_pred ----------------------------------------------------------c---------------------
Confidence 0
Q ss_pred HHHHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhh
Q 001154 693 AASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKEL 772 (1136)
Q Consensus 693 al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~ 772 (1136)
. . +. .
T Consensus 263 --------~---~---~~--------------------------------------------------~----------- 267 (529)
T PRK15134 263 --------G---D---PV--------------------------------------------------P----------- 267 (529)
T ss_pred --------c---c---cc--------------------------------------------------c-----------
Confidence 0 0 00 0
Q ss_pred hhHhhhhcCcchhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEE
Q 001154 773 QERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAF 852 (1136)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i 852 (1136)
. . . . .. ..+.++|+++.++...+. .+...+++.+|+||||+|
T Consensus 268 ---------------~------~---~----~-~~-------~~l~~~~l~~~~~~~~~~--~~~~~~~~~il~~isl~i 309 (529)
T PRK15134 268 ---------------L------P---E----P-AS-------PLLDVEQLQVAFPIRKGI--LKRTVDHNVVVKNISFTL 309 (529)
T ss_pred ---------------c------C---C----C-CC-------CcccccCcEEEeecCccc--cccccccceeeecceeEE
Confidence 0 0 0 0 00 002222333222100000 000002356999999999
Q ss_pred ECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh------cccceEEEeccCC--CCCCCCcHHHHHH
Q 001154 853 RPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQND--IHSPGLTVLESLL 924 (1136)
Q Consensus 853 ~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~~~~~ltv~e~l~ 924 (1136)
++||++||+||||||||||+++|+|..+ .+|+|+++|.++... .+++.+||++|++ .+++.+||.||+.
T Consensus 310 ~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~ 386 (529)
T PRK15134 310 RPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIE 386 (529)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHH
Confidence 9999999999999999999999999863 479999999865321 1345689999996 4778899999998
Q ss_pred HHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 001154 925 FSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARA 1003 (1136)
Q Consensus 925 ~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~ 1003 (1136)
+....+.. .....+.++.++++++.+++. ...+..+ ..|||||||||+|||||+.+|+||||||||+|||+.+
T Consensus 387 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~ 460 (529)
T PRK15134 387 EGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTV 460 (529)
T ss_pred HHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHH
Confidence 86433211 112233445678999999996 3555433 5799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1004 AAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1004 ~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+..+++.|++++++ |+|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 461 ~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 461 QAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 99999999999865 899999999976 46778999999985 789988864
No 23
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.9e-64 Score=609.46 Aligned_cols=454 Identities=20% Similarity=0.274 Sum_probs=341.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999998876 9999999988754321 2469999999989999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.|..... . ....+++++++.+||++..+..++
T Consensus 101 ~tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (510)
T PRK15439 101 LSVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSAG--- 139 (510)
T ss_pred CcHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCChh---
Confidence 99999998853100 0 001236788999999887776654
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||+|++|++
T Consensus 140 --~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 140 --SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQ--GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 59999999999999999999999999999999999999999999998753 45677788999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcC
Q 001154 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1136)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1136)
|++++.|+.+++... +.+ +.+.
T Consensus 216 G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~-------------- 237 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------DII-----------------------------QAIT-------------- 237 (510)
T ss_pred CEEEEecChHHcCHH---------------HHH-----------------------------HHHh--------------
Confidence 999999876543110 000 0000
Q ss_pred cccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHH
Q 001154 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1136)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 543 (1136)
.... ......
T Consensus 238 --------------------------------------------------------------~~~~-~~~~~~------- 247 (510)
T PRK15439 238 --------------------------------------------------------------PAAR-EKSLSA------- 247 (510)
T ss_pred --------------------------------------------------------------Cccc-cccccc-------
Confidence 0000 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHH
Q 001154 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1136)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1136)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCc
Q 001154 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1136)
Q Consensus 624 l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 703 (1136)
...
T Consensus 248 --------------------------------------------------~~~--------------------------- 250 (510)
T PRK15439 248 --------------------------------------------------SQK--------------------------- 250 (510)
T ss_pred --------------------------------------------------ccc---------------------------
Confidence 000
Q ss_pred ccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001154 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1136)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1136)
.. ..+
T Consensus 251 ~~-----------------~~~---------------------------------------------------------- 255 (510)
T PRK15439 251 LW-----------------LEL---------------------------------------------------------- 255 (510)
T ss_pred cc-----------------ccc----------------------------------------------------------
Confidence 00 000
Q ss_pred hhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEcc
Q 001154 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1136)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1136)
+. ... . . +. + +.-+..+|++. .+|+||||+|++|+++||+||
T Consensus 256 -----~~----~~~-~--~-~~-~------~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~ 297 (510)
T PRK15439 256 -----PG----NRR-Q--Q-AA-G------APVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGV 297 (510)
T ss_pred -----cc----ccc-c--c-CC-C------CceEEEeCCCC------------------CCccceeEEEcCCcEEEEECC
Confidence 00 000 0 0 00 0 00133334321 147899999999999999999
Q ss_pred CCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCC---CCCCCCcHHHHHHHHhhhcCCCccc
Q 001154 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLFSAWLRLPSEIE 936 (1136)
Q Consensus 864 nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~ltv~e~l~~~~~lr~~~~~~ 936 (1136)
||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+......
T Consensus 298 NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~ 375 (510)
T PRK15439 298 VGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIK 375 (510)
T ss_pred CCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccC
Confidence 99999999999999876 4589999999865321 1245689999984 4778899999986421111110001
Q ss_pred HHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH
Q 001154 937 LETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIV 1015 (1136)
Q Consensus 937 ~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~ 1015 (1136)
....++.++++++.+++. +..+..+ ..|||||||||+|||||+.+|+||||||||+|||+.++..+++.|++++
T Consensus 376 ~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~ 450 (510)
T PRK15439 376 PARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIA 450 (510)
T ss_pred hHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHH
Confidence 122345678899999996 5556543 4799999999999999999999999999999999999999999999998
Q ss_pred hCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 1016 NTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 1016 ~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
++|.|||++|||++ .+.+.||++++|+ +|++++.|..+.
T Consensus 451 ~~g~tiIivsHd~~-~i~~~~d~i~~l~-~G~i~~~~~~~~ 489 (510)
T PRK15439 451 AQNVAVLFISSDLE-EIEQMADRVLVMH-QGEISGALTGAA 489 (510)
T ss_pred hCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEEcccc
Confidence 78999999999987 5778899999998 579998886654
No 24
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=8.3e-64 Score=607.02 Aligned_cols=460 Identities=20% Similarity=0.301 Sum_probs=341.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +.+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999998651 238999999988754321 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccc-cccccCc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA-DTLVGDE 302 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~-dt~vg~~ 302 (1136)
+||+||+.++......+...+ . .....+++++++.+||.+.. ++.+
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMA------Y------------------------NAMYLRAKNLLRELQLDADNVTRPV--- 139 (500)
T ss_pred CcHHHHHHhhccccccccccC------H------------------------HHHHHHHHHHHHHcCCCCCcccCch---
Confidence 999999988643210000000 0 00122477889999997654 3434
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||+|++|+
T Consensus 140 --~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tviiitHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 140 --GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAH--GVACVYISHKLNEVKAVCDTICVIR 215 (500)
T ss_pred --hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 469999999999999999999999999999999999999999999998753 5567778899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhc
Q 001154 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1136)
+|++++.|+.+++.. ...
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~------------------ 233 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDI------------------ 233 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHH------------------
Confidence 999987664321000 000
Q ss_pred CcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHH
Q 001154 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1136)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g 542 (1136)
. .. +...
T Consensus 234 -----------------------------~-~~----------------------------~~~~--------------- 240 (500)
T TIGR02633 234 -----------------------------I-TM----------------------------MVGR--------------- 240 (500)
T ss_pred -----------------------------H-HH----------------------------HhCc---------------
Confidence 0 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHH
Q 001154 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1136)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 622 (1136)
+
T Consensus 241 --------------------------------------------------~----------------------------- 241 (500)
T TIGR02633 241 --------------------------------------------------E----------------------------- 241 (500)
T ss_pred --------------------------------------------------c-----------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCC
Q 001154 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1136)
Q Consensus 623 ~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 702 (1136)
.+
T Consensus 242 ---------------------------------------------------~~--------------------------- 243 (500)
T TIGR02633 242 ---------------------------------------------------IT--------------------------- 243 (500)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred cccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCc
Q 001154 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1136)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1136)
. .. + .
T Consensus 244 ------~---------------~~--------------------------------~---------~------------- 248 (500)
T TIGR02633 244 ------S---------------LY--------------------------------P---------H------------- 248 (500)
T ss_pred ------c---------------cc--------------------------------c---------c-------------
Confidence 0 00 0 0
Q ss_pred chhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEc
Q 001154 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1136)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G 862 (1136)
. . . +.. ...+..+|+++.+.. .++..+|+|+||+|++||++||+|
T Consensus 249 -----~------~---~----~~~-------~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l~G 293 (500)
T TIGR02633 249 -----E------P---H----EIG-------DVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGVAG 293 (500)
T ss_pred -----c------c---c----CCC-------CceEEEeCCcccccc----------cccccccccceeEEeCCcEEEEeC
Confidence 0 0 0 000 001333444322100 013458999999999999999999
Q ss_pred cCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCC---CCCCCCcHHHHHHHHhh--hcCCC
Q 001154 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAW--LRLPS 933 (1136)
Q Consensus 863 ~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~ltv~e~l~~~~~--lr~~~ 933 (1136)
|||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|+. .+++.+||+|++.+... .....
T Consensus 294 ~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~ 372 (500)
T TIGR02633 294 LVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKM 372 (500)
T ss_pred CCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCC
Confidence 9999999999999998652 247999999987632 22356789999995 57889999999987532 11000
Q ss_pred cccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 001154 934 EIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1136)
Q Consensus 934 ~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1136)
.......++.++++++.+++.+ ..+..+ ..|||||||||+|||+|+.+|+||||||||+|||+.++..+++.|+
T Consensus 373 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 447 (500)
T TIGR02633 373 RIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLIN 447 (500)
T ss_pred cCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHH
Confidence 1122333456788999999863 445443 4799999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 1013 ~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+++++|.|||++|||++ ++.+.||++++|.+ |+++..++..
T Consensus 448 ~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 448 QLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred HHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99888999999999986 57788999999985 7888877653
No 25
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=9.8e-64 Score=608.83 Aligned_cols=445 Identities=22% Similarity=0.277 Sum_probs=337.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhh--CCCcceeeEEEECC-----------------------ccC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNG-----------------------HGF 202 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l--~~~~~~~G~I~~~G-----------------------~~~ 202 (1136)
+.+|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999986 454 89999973 211
Q ss_pred C-------CC------CCCceEEEEecc-CCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHH
Q 001154 203 K-------EF------VPPRTSAYVSQQ-DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFM 268 (1136)
Q Consensus 203 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~ 268 (1136)
. .. ..++.++|++|+ +.+++.+||+||+.|.....+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~--------------------------- 142 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEG--------------------------- 142 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCH---------------------------
Confidence 0 00 013568999997 677888999999988643221100
Q ss_pred HHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHH
Q 001154 269 KSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKY 348 (1136)
Q Consensus 269 ~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~ 348 (1136)
.+...+++++++.+||++..+..+ ..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.
T Consensus 143 -------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 143 -------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred -------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 001234788999999987766554 46999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCccccccc
Q 001154 349 LKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQY 428 (1136)
Q Consensus 349 l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~ 428 (1136)
|+++++.. +++|++++|+...+.++||+|++|++|++++.|+++++.+.+..
T Consensus 211 l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~--------------------------- 262 (520)
T TIGR03269 211 LEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME--------------------------- 262 (520)
T ss_pred HHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh---------------------------
Confidence 99986543 45677788999999999999999999999988765432110000
Q ss_pred ccCCCCCCCCCChhHHHHHHHhCccccchhHhhcCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHH
Q 001154 429 WSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVF 508 (1136)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~ 508 (1136)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHH
Q 001154 509 KFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSW 588 (1136)
Q Consensus 509 ~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~ 588 (1136)
.
T Consensus 263 ---------------------------~---------------------------------------------------- 263 (520)
T TIGR03269 263 ---------------------------G---------------------------------------------------- 263 (520)
T ss_pred ---------------------------h----------------------------------------------------
Confidence 0
Q ss_pred HHhhhHHHHhhhHhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhcc
Q 001154 589 ALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFI 668 (1136)
Q Consensus 589 ~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~ 668 (1136)
.
T Consensus 264 ---~---------------------------------------------------------------------------- 264 (520)
T TIGR03269 264 ---V---------------------------------------------------------------------------- 264 (520)
T ss_pred ---c----------------------------------------------------------------------------
Confidence 0
Q ss_pred ccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHH
Q 001154 669 ISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNA 748 (1136)
Q Consensus 669 i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~ 748 (1136)
. .+.
T Consensus 265 -~--~~~------------------------------------------------------------------------- 268 (520)
T TIGR03269 265 -S--EVE------------------------------------------------------------------------- 268 (520)
T ss_pred -h--hhc-------------------------------------------------------------------------
Confidence 0 000
Q ss_pred HHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcchhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeec
Q 001154 749 LFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDV 828 (1136)
Q Consensus 749 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (1136)
. . . . . . .. ...+.++|+++.++.
T Consensus 269 -------------~--~--~-----------~-------~------~--------~~--------~~~l~~~~l~~~~~~ 291 (520)
T TIGR03269 269 -------------K--E--C-----------E-------V------E--------VG--------EPIIKVRNVSKRYIS 291 (520)
T ss_pred -------------c--c--c-----------c-------c------C--------CC--------CceEEEeccEEEecc
Confidence 0 0 0 0 0 0 00 001334444443310
Q ss_pred cccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEc-Ccc---CCh------h
Q 001154 829 PVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYIS-GYP---KRQ------E 898 (1136)
Q Consensus 829 ~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~---~~~------~ 898 (1136)
. ..+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++ |.+ +.. .
T Consensus 292 ~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~~~ 361 (520)
T TIGR03269 292 V--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDGRG 361 (520)
T ss_pred C--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhhHH
Confidence 0 0123569999999999999999999999999999999999876 468999996 532 111 1
Q ss_pred cccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-----cccccccCCCCCCCCHHH
Q 001154 899 TFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-----LSGALIGLPGINGLSTEQ 973 (1136)
Q Consensus 899 ~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-----~~~~~~~~~~~~~LSgGq 973 (1136)
..++.+||++|++.+++.+||.|++.+...+. ......++.+.++++.+++.+ ..+.. +..|||||
T Consensus 362 ~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq 432 (520)
T TIGR03269 362 RAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGE 432 (520)
T ss_pred HHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHH
Confidence 23456899999988889999999998753221 122223456788999999965 23433 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 974 RKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 974 rqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
||||+|||||+.+|+||||||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.+|++++|++ |+++..|
T Consensus 433 ~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g 510 (520)
T TIGR03269 433 RHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIG 510 (520)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999764 899999999986 47778999999984 7888887
Q ss_pred CC
Q 001154 1053 PL 1054 (1136)
Q Consensus 1053 ~~ 1054 (1136)
+.
T Consensus 511 ~~ 512 (520)
T TIGR03269 511 DP 512 (520)
T ss_pred CH
Confidence 64
No 26
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-63 Score=605.55 Aligned_cols=453 Identities=20% Similarity=0.294 Sum_probs=340.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC----CCceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999998776 999999998875322 23579999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.++......+. .+ . .+...+++.+++.+||++..+..+
T Consensus 94 ~tv~~~l~~~~~~~~~~~-~~----------------~--------------~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-VN----------------R--------------RLLNYEAREQLEHLGVDIDPDTPL---- 138 (501)
T ss_pred CCHHHHHHhcccccccCC-CC----------------H--------------HHHHHHHHHHHHHcCCCCCcCCch----
Confidence 999999988532100000 00 0 001234778899999987666555
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++..+||+|++|++
T Consensus 139 -~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 139 -KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAE--GRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998653 45677788999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhcC
Q 001154 384 GQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELAV 463 (1136)
Q Consensus 384 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1136)
|+++..++.... . +..+..+.
T Consensus 216 G~i~~~~~~~~~-----------------------~--------------------~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-----------------------V--------------------DRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-----------------------C--------------------CHHHHHHH----------------
Confidence 999865421000 0 00000000
Q ss_pred cccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHHH
Q 001154 464 PFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLGA 543 (1136)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 543 (1136)
+....
T Consensus 237 ------------------------------------------------------------~~~~~--------------- 241 (501)
T PRK11288 237 ------------------------------------------------------------MVGRE--------------- 241 (501)
T ss_pred ------------------------------------------------------------hcCCC---------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHHH
Q 001154 544 LYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQL 623 (1136)
Q Consensus 544 lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~ 623 (1136)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCCc
Q 001154 624 LLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGHS 703 (1136)
Q Consensus 624 l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 703 (1136)
... .
T Consensus 242 --------------------------------------------------~~~--------------------------~ 245 (501)
T PRK11288 242 --------------------------------------------------IGD--------------------------I 245 (501)
T ss_pred --------------------------------------------------ccc--------------------------c
Confidence 000 0
Q ss_pred ccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCcc
Q 001154 704 WDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGEN 783 (1136)
Q Consensus 704 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1136)
+. .
T Consensus 246 ~~------------------------------------------------------~----------------------- 248 (501)
T PRK11288 246 YG------------------------------------------------------Y----------------------- 248 (501)
T ss_pred cc------------------------------------------------------c-----------------------
Confidence 00 0
Q ss_pred hhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEcc
Q 001154 784 VVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGV 863 (1136)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~ 863 (1136)
. .. . . .+..+.++|+++ ..+++|+||+|++||++||+||
T Consensus 249 ----~------~~--~----~--------~~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~iiG~ 287 (501)
T PRK11288 249 ----R------PR--P----L--------GEVRLRLDGLKG-----------------PGLREPISFSVRAGEIVGLFGL 287 (501)
T ss_pred ----c------cc--C----C--------CCcEEEEecccc-----------------CCcccceeEEEeCCcEEEEEcC
Confidence 0 00 0 0 001233334321 1378999999999999999999
Q ss_pred CCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCC---CCCCCCcHHHHHHHHhhhcC-CCc-
Q 001154 864 SGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRL-PSE- 934 (1136)
Q Consensus 864 nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~ltv~e~l~~~~~lr~-~~~- 934 (1136)
||||||||+++|+|..+ +.+|+|.++|+++.. ...++.++|++|++ .+++.+|+.|++.+...... +..
T Consensus 288 NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~ 365 (501)
T PRK11288 288 VGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGC 365 (501)
T ss_pred CCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhccccc
Confidence 99999999999999876 468999999986532 12345789999985 47888999999987532110 000
Q ss_pred -ccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 001154 935 -IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVR 1012 (1136)
Q Consensus 935 -~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1012 (1136)
......++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||||||||+|||+.++..++++|+
T Consensus 366 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 440 (501)
T PRK11288 366 LINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIY 440 (501)
T ss_pred ccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHH
Confidence 01222335678899999984 5556543 4799999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCch
Q 001154 1013 NIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKS 1058 (1136)
Q Consensus 1013 ~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~ 1058 (1136)
+++++|.|||++|||++ .+.+.+|++++|. +|++++.|..++..
T Consensus 441 ~l~~~g~tviivsHd~~-~~~~~~d~i~~l~-~g~i~~~~~~~~~~ 484 (501)
T PRK11288 441 ELAAQGVAVLFVSSDLP-EVLGVADRIVVMR-EGRIAGELAREQAT 484 (501)
T ss_pred HHHhCCCEEEEECCCHH-HHHhhCCEEEEEE-CCEEEEEEccccCC
Confidence 99888999999999986 5778899999998 57899998876543
No 27
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=8.9e-63 Score=655.89 Aligned_cols=210 Identities=21% Similarity=0.259 Sum_probs=175.1
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.|||.++
T Consensus 1308 ~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~di 1374 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGREI 1374 (1560)
T ss_pred eEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEc
Confidence 5778888776631 22459999999999999999999999999999999999876 5689999999987
Q ss_pred Ch---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------cccccCCC
Q 001154 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1136)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~~~~~ 965 (1136)
.. ..+++.+|||||++.++.+ |++|||... .+.+ ++.++++++.+++.+.. |..++..
T Consensus 1375 ~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~- 1442 (1560)
T PTZ00243 1375 GAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG- 1442 (1560)
T ss_pred ccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC-
Confidence 53 5678899999999999976 999999531 1111 24578888888886542 4445443
Q ss_pred CCCCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 001154 966 INGLSTEQRKRLTIAVELVAN-PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~-p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~ 1044 (1136)
+.+||||||||+||||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|+
T Consensus 1443 G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd- 1518 (1560)
T PTZ00243 1443 GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD- 1518 (1560)
T ss_pred cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE-
Confidence 357999999999999999996 89999999999999999999999999864 5899999999964 678899999998
Q ss_pred CcEEEEeCCC
Q 001154 1045 GGELIYAGPL 1054 (1136)
Q Consensus 1045 gG~~~~~g~~ 1054 (1136)
+|+++..|+.
T Consensus 1519 ~G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 HGAVAEMGSP 1528 (1560)
T ss_pred CCEEEEECCH
Confidence 5899999975
No 28
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.6e-62 Score=651.51 Aligned_cols=209 Identities=20% Similarity=0.266 Sum_probs=174.7
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|+|... .+|+|.|||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 5788888877632 23579999999999999999999999999999999999864 479999999987
Q ss_pred Ch---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 001154 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1136)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1136)
.. ..+++.++||||++.++++ |++|||.... .. .++.++++++.+++.+. .|..++. +
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e-~ 1350 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD-G 1350 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCcccccccccc-C
Confidence 53 4578899999999999976 9999995321 11 23457888888888543 2444443 3
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
+.+||||||||+||||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+|+|+++ ....||+|++|++
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~- 1426 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG- 1426 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999864 5899999999964 5677999999985
Q ss_pred cEEEEeCCC
Q 001154 1046 GELIYAGPL 1054 (1136)
Q Consensus 1046 G~~~~~g~~ 1054 (1136)
|+++..|++
T Consensus 1427 G~ivE~g~p 1435 (1490)
T TIGR01271 1427 SSVKQYDSI 1435 (1490)
T ss_pred CEEEEeCCH
Confidence 799998875
No 29
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-63 Score=597.33 Aligned_cols=450 Identities=18% Similarity=0.265 Sum_probs=337.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC----CCceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1136)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999998876 999999998875432 13569999999988999
Q ss_pred CCHHHHHHHhhh-hcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 224 MTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 224 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
+||+||+.++.. ..+.. .+ . .+...+++.+++.+||++..++.++
T Consensus 88 ~tv~~~l~~~~~~~~~~~--~~---~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 133 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF--VD---Q---------------------------DKMYRDTKAIFDELDIDIDPRAKVA-- 133 (491)
T ss_pred CCHHHHhhcccccccccc--cC---H---------------------------HHHHHHHHHHHHHcCCCCCccCchh--
Confidence 999999987531 11000 00 0 0011247788999999877776554
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.+|+.++|+.+++..+||+|++|+
T Consensus 134 ---~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 134 ---TLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKER--GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred ---hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 69999999999999999999999999999999999999999999998653 4566668899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhc
Q 001154 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1136)
+|+++..|+.+++.. .+..+.
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHH---------------
Confidence 999998776432100 000000
Q ss_pred CcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHH
Q 001154 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1136)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g 542 (1136)
+....
T Consensus 230 -------------------------------------------------------------~~~~~-------------- 234 (491)
T PRK10982 230 -------------------------------------------------------------MVGRS-------------- 234 (491)
T ss_pred -------------------------------------------------------------HhCCC--------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHH
Q 001154 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1136)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 622 (1136)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCC
Q 001154 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1136)
Q Consensus 623 ~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 702 (1136)
+.
T Consensus 235 ---------------------------------------------------~~--------------------------- 236 (491)
T PRK10982 235 ---------------------------------------------------LT--------------------------- 236 (491)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred cccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCc
Q 001154 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1136)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1136)
. .
T Consensus 237 --~------------------~---------------------------------------------------------- 238 (491)
T PRK10982 237 --Q------------------R---------------------------------------------------------- 238 (491)
T ss_pred --c------------------c----------------------------------------------------------
Confidence 0 0
Q ss_pred chhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEc
Q 001154 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1136)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G 862 (1136)
.+. . .. . + .+..+.++|+++. ...+|+||||++++||++||+|
T Consensus 239 -----~~~--~-~~--~----~--------~~~~i~~~~l~~~---------------~~~~l~~vsl~i~~Ge~~~l~G 281 (491)
T PRK10982 239 -----FPD--K-EN--K----P--------GEVILEVRNLTSL---------------RQPSIRDVSFDLHKGEILGIAG 281 (491)
T ss_pred -----ccc--c-cC--C----C--------CCcEEEEeCcccc---------------cCcccceeeEEEeCCcEEEEec
Confidence 000 0 00 0 0 0012344454432 1248999999999999999999
Q ss_pred cCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCC---CCCCCCcHHHHHHHHhh--hcCCC
Q 001154 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQND---IHSPGLTVLESLLFSAW--LRLPS 933 (1136)
Q Consensus 863 ~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~ltv~e~l~~~~~--lr~~~ 933 (1136)
|||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+. .+++.+|+.+|..+... .....
T Consensus 282 ~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (491)
T PRK10982 282 LVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKV 359 (491)
T ss_pred CCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccc
Confidence 999999999999999876 4689999999775421 2345689999985 36788888877433210 00000
Q ss_pred c-ccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 001154 934 E-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTV 1011 (1136)
Q Consensus 934 ~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l 1011 (1136)
. ......++.+.++++.+++. +..+.. +.+|||||||||+|||+|+.+|+||||||||+|||+.++..+++.|
T Consensus 360 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l 434 (491)
T PRK10982 360 GLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLI 434 (491)
T ss_pred cccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHH
Confidence 1 11223345677888888885 344443 3579999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 1012 RNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 1012 ~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+++.++|.|||++|||++ ++.+.||++++|.+ |+++..++..
T Consensus 435 ~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 435 AELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred HHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 999888999999999987 47788999999985 7888777554
No 30
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.8e-61 Score=583.49 Aligned_cols=446 Identities=19% Similarity=0.268 Sum_probs=324.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCC--C--
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQ--V-- 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~--~-- 221 (1136)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 5999999999999999999999999999999999998876 999999997654322 12458999998532 1
Q ss_pred ----CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccc
Q 001154 222 ----AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1136)
Q Consensus 222 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt 297 (1136)
..+||+|++.+.. ....+++.+++.+||++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1467777764310 001236788999999887776
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
.++ .|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||+
T Consensus 132 ~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS--GITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHhhCCE
Confidence 654 59999999999999999999999999999999999999999999998753 45666688999999999999
Q ss_pred EEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccch
Q 001154 378 VILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNL 457 (1136)
Q Consensus 378 vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (1136)
|++|++|++++.|+++++..- +.+..+. .
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~~~~~-----------------------------~------- 233 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALVAQLA-----------------------------H------- 233 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhhhhhh-----------------------------h-------
Confidence 999999999998876543100 0000000 0
Q ss_pred hHhhcCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccc
Q 001154 458 SEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDG 537 (1136)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~ 537 (1136)
. .....
T Consensus 234 ------------------------------------~-------------------------------------~~~~~- 239 (490)
T PRK10938 234 ------------------------------------S-------------------------------------EQLEG- 239 (490)
T ss_pred ------------------------------------h-------------------------------------hccCc-
Confidence 0 00000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHH
Q 001154 538 GLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVV 617 (1136)
Q Consensus 538 ~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~ 617 (1136)
.
T Consensus 240 ------------------------------------------------------~------------------------- 240 (490)
T PRK10938 240 ------------------------------------------------------V------------------------- 240 (490)
T ss_pred ------------------------------------------------------c-------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHh
Q 001154 618 RFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVN 697 (1136)
Q Consensus 618 ~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~n 697 (1136)
..|
T Consensus 241 -------------------------------------------------------~~~---------------------- 243 (490)
T PRK10938 241 -------------------------------------------------------QLP---------------------- 243 (490)
T ss_pred -------------------------------------------------------ccC----------------------
Confidence 000
Q ss_pred hhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhh
Q 001154 698 EFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDR 777 (1136)
Q Consensus 698 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 777 (1136)
.. ..
T Consensus 244 ------------~~--------------------------------------------------------~~-------- 247 (490)
T PRK10938 244 ------------EP--------------------------------------------------------DE-------- 247 (490)
T ss_pred ------------cc--------------------------------------------------------cc--------
Confidence 00 00
Q ss_pred hhcCcchhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcE
Q 001154 778 RRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVL 857 (1136)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~ 857 (1136)
.. .+ .. . +. ....+.++|+++.+ +++.+|+|+||+|++||+
T Consensus 248 -----~~---~~-----~~--~----~~-------~~~~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~ 288 (490)
T PRK10938 248 -----PS---AR-----HA--L----PA-------NEPRIVLNNGVVSY-------------NDRPILHNLSWQVNPGEH 288 (490)
T ss_pred -----cc---cc-----cc--c----CC-------CCceEEEeceEEEE-------------CCeeEEeeceEEEcCCCE
Confidence 00 00 00 0 00 00124455554433 345699999999999999
Q ss_pred EEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCCCCCC--CCcHHHHHHHHhhh--
Q 001154 858 TALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP--GLTVLESLLFSAWL-- 929 (1136)
Q Consensus 858 ~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~--~ltv~e~l~~~~~l-- 929 (1136)
+||+||||||||||+++|+|..+. ..+|+|.++|.+... ...++.+||++|++.+++ ..++.+++.+....
T Consensus 289 ~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~ 367 (490)
T PRK10938 289 WQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSI 367 (490)
T ss_pred EEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhcccccc
Confidence 999999999999999999996531 147999999976421 123567999999876543 34676666543210
Q ss_pred cCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHH
Q 001154 930 RLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVM 1008 (1136)
Q Consensus 930 r~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~ 1008 (1136)
....... ...++.++++++.+++.+ ..+..+ ..|||||||||+||+||+.+|+||||||||+|||+.++..++
T Consensus 368 ~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~ 441 (490)
T PRK10938 368 GIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVR 441 (490)
T ss_pred ccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHH
Confidence 1101111 223456789999999976 666543 479999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCC-CEEEEEecCCcHHHHH-hcCEEEEEecCcEEEEe
Q 001154 1009 RTVRNIVNTG-RTIVCTIHQPSIDIFE-SFDELLFMKRGGELIYA 1051 (1136)
Q Consensus 1009 ~~l~~l~~~g-~tii~~~H~~~~~~~~-~~d~~~~l~~gG~~~~~ 1051 (1136)
+.|++++++| .|||++||+++ ++.+ .+|++++|++ |++++.
T Consensus 442 ~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 442 RFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 9999998765 47999999976 3555 4799999985 666654
No 31
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3e-60 Score=514.47 Aligned_cols=471 Identities=22% Similarity=0.308 Sum_probs=359.2
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCC--CcceeeEEEECCccCCCCCC-------CceEEEEec
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEFVP-------PRTSAYVSQ 216 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~--~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q 216 (1136)
....++++|||.|++||.++|+|.||||||-..+.+.|+++. ....+|+|.|+|.++-.... ...|+.++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 446799999999999999999999999999999999999876 23558999999998754432 147999999
Q ss_pred cC--CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccc
Q 001154 217 QD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 294 (1136)
Q Consensus 217 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~ 294 (1136)
+| .+-|-.|+..-|.-..+++.. +.....+.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------------------------------~~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------------------------------LSRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------------------------------ccHHHHHHHHHHHHHHcCCCch
Confidence 98 356667777777655544321 1112234568889999999876
Q ss_pred ccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhh
Q 001154 295 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 374 (1136)
Q Consensus 295 ~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~ 374 (1136)
...+ +.+...|||||||||.||.||+.+|++|+-||||++||.....+|.++|+++..+++ ..++.|+|+..-+..+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~g-Ma~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELG-MAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhC-cEEEEEeccHHHHHHh
Confidence 5443 457788999999999999999999999999999999999999999999999988764 5566699999999999
Q ss_pred cCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccc
Q 001154 375 FDDVILLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTG 454 (1136)
Q Consensus 375 ~D~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (1136)
+|+|+||.+|+++++|+.+.+.. .|. .||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~Pq-------------------------HpYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQ-------------------------HPYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCC-------------------------ChHH-----------------
Confidence 99999999999999998766521 111 1110
Q ss_pred cchhHhhcCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 001154 455 KNLSEELAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTI 534 (1136)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~ 534 (1136)
|..+ .
T Consensus 255 ---------------------------------------r~Ll----------------------------~-------- 259 (534)
T COG4172 255 ---------------------------------------RKLL----------------------------A-------- 259 (534)
T ss_pred ---------------------------------------HHHH----------------------------h--------
Confidence 0000 0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccc
Q 001154 535 DDGGLYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDP 614 (1136)
Q Consensus 535 ~~~~~~~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~ 614 (1136)
.-|
T Consensus 260 --------------------------------------------------------aeP--------------------- 262 (534)
T COG4172 260 --------------------------------------------------------AEP--------------------- 262 (534)
T ss_pred --------------------------------------------------------cCC---------------------
Confidence 000
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHH
Q 001154 615 NVVRFSRQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAA 694 (1136)
Q Consensus 615 ~~~~f~~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al 694 (1136)
T Consensus 263 -------------------------------------------------------------------------------- 262 (534)
T COG4172 263 -------------------------------------------------------------------------------- 262 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcCCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhh
Q 001154 695 SVNEFLGHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQE 774 (1136)
Q Consensus 695 ~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 774 (1136)
.+.
T Consensus 263 --------------~g~--------------------------------------------------------------- 265 (534)
T COG4172 263 --------------SGD--------------------------------------------------------------- 265 (534)
T ss_pred --------------CCC---------------------------------------------------------------
Confidence 000
Q ss_pred HhhhhcCcchhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEEC
Q 001154 775 RDRRRKGENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRP 854 (1136)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~ 854 (1136)
. . ..+. -.+.-+..+++...++.+..+-. -..+...++++||+++++
T Consensus 266 ---------------------~--~--p~~~------~~~~ll~~~~v~v~f~i~~g~~~--r~~~~~~AVd~isl~L~~ 312 (534)
T COG4172 266 ---------------------P--P--PLPE------DAPVLLEVEDLRVWFPIKGGFLR--RTVDHLRAVDGISLTLRR 312 (534)
T ss_pred ---------------------C--C--CCCC------CCCceEEecceEEEEecCCcccc--ccchheEEeccceeEecC
Confidence 0 0 0000 00011111222111111110000 011346789999999999
Q ss_pred CcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCC--CCCCCCcHHHHHHHH
Q 001154 855 GVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHSPGLTVLESLLFS 926 (1136)
Q Consensus 855 Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~~~ltv~e~l~~~ 926 (1136)
||.+||||.||||||||-.+|.++.. .+|.|.++|.++.. ...++.+-.|+||| .+.|.+||.+-+.-+
T Consensus 313 gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EG 389 (534)
T COG4172 313 GQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEG 389 (534)
T ss_pred CCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhh
Confidence 99999999999999999999999876 35999999998753 24567889999997 467999999998877
Q ss_pred hhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Q 001154 927 AWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAI 1006 (1136)
Q Consensus 927 ~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~ 1006 (1136)
...+.| ..+..++++++.++|+.+||.+-.-.. .++++|||||||++|||||+.+|++++||||||+||-.-+..
T Consensus 390 L~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~R----YPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQ 464 (534)
T COG4172 390 LRVHEP-KLSAAERDQRVIEALEEVGLDPATRNR----YPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQ 464 (534)
T ss_pred hhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhc----CCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHH
Confidence 666654 456788889999999999997643221 246899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1007 VMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1007 i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|.++|+++.+ .|.+-++|+||... +-..||+++||+ +|+||..||.
T Consensus 465 vv~LLr~LQ~k~~LsYLFISHDL~V-vrAl~~~viVm~-~GkiVE~G~~ 511 (534)
T COG4172 465 VLDLLRDLQQKHGLSYLFISHDLAV-VRALCHRVIVMR-DGKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHHHhCCeEEEEeccHHH-HHHhhceEEEEe-CCEEeeeCCH
Confidence 9999999975 59999999999763 667799999998 5899999986
No 32
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.9e-59 Score=572.22 Aligned_cols=191 Identities=20% Similarity=0.266 Sum_probs=155.5
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCC-CCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~-~~~~~lt 918 (1136)
+++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.+++. ..+||++|+. .+++.+|
T Consensus 335 ~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~t 404 (556)
T PRK11819 335 GDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKT 404 (556)
T ss_pred CCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--------eEEEEEeCchhhcCCCCC
Confidence 45679999999999999999999999999999999999876 46899998542 1489999986 6778899
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|+|++.+....+.. ... ....+++++.+++.+ ..+..+ ..|||||||||+||++|+.+|++|||||||+
T Consensus 405 v~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 474 (556)
T PRK11819 405 VWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGERNRLHLAKTLKQGGNVLLLDEPTN 474 (556)
T ss_pred HHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 99999876432211 111 122456888888863 344433 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-EeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~~ 1054 (1136)
|||+.++..+++.|+++ .| |||++||+++ .+...||++++|++||++. +.|+.
T Consensus 475 ~LD~~~~~~l~~~l~~~--~~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g~~ 528 (556)
T PRK11819 475 DLDVETLRALEEALLEF--PG-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEGNF 528 (556)
T ss_pred CCCHHHHHHHHHHHHhC--CC-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecCCH
Confidence 99999999999999986 24 8999999976 4677899999998767776 55543
No 33
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.3e-58 Score=566.37 Aligned_cols=190 Identities=19% Similarity=0.257 Sum_probs=154.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCC-CCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~-~~~~~lt 918 (1136)
+++.+|+||||+|++|+++||+||||||||||+++|+|... +.+|+|.+++. ..+||++|++ .+++.+|
T Consensus 333 ~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~~~t 402 (552)
T TIGR03719 333 GDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET--------VKLAYVDQSRDALDPNKT 402 (552)
T ss_pred CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--------eEEEEEeCCccccCCCCc
Confidence 44679999999999999999999999999999999999876 46899998542 1589999986 4778899
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
++|++.+...... .... ...+.++++.+++.+ ..+..+ ..|||||||||+|||+|+.+|++|||||||+
T Consensus 403 v~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe~qrv~la~al~~~p~lllLDEPt~ 472 (552)
T TIGR03719 403 VWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGERNRVHLAKTLKSGGNVLLLDEPTN 472 (552)
T ss_pred HHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Confidence 9999987642211 1111 123457888888863 344433 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-EeCC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGP 1053 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~ 1053 (1136)
|||+.++..+++.|+++. .|||++|||++ .+...+|++++|++||+++ +.|+
T Consensus 473 ~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g~ 525 (552)
T TIGR03719 473 DLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEGN 525 (552)
T ss_pred CCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCCC
Confidence 999999999999999872 48999999976 4667899999998767776 5554
No 34
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-58 Score=564.75 Aligned_cols=188 Identities=19% Similarity=0.262 Sum_probs=155.2
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCC--CCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI--HSPG 916 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~--~~~~ 916 (1136)
++++.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|. +.+||++|++. +.+.
T Consensus 329 ~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~--------~~i~~~~q~~~~~~~~~ 398 (530)
T PRK15064 329 FDNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN--------ANIGYYAQDHAYDFEND 398 (530)
T ss_pred eCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--------eEEEEEcccccccCCCC
Confidence 345679999999999999999999999999999999999876 46899999873 45899999864 4567
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
+|++|++.+.. ... ..++.++++++.+++. +..+..+ ..||||||||++||++|+.+|+|||||||
T Consensus 399 ~t~~~~~~~~~---~~~-----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEP 465 (530)
T PRK15064 399 LTLFDWMSQWR---QEG-----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGGEKGRMLFGKLMMQKPNVLVMDEP 465 (530)
T ss_pred CcHHHHHHHhc---cCC-----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 89999986421 111 1124567889999984 4555443 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-EeCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~~ 1054 (1136)
|+|||+.++..+++.|+++ +.|||++|||++ .+...+|++++|++ |+++ +.|+.
T Consensus 466 t~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~g~~ 520 (530)
T PRK15064 466 TNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFSGTY 520 (530)
T ss_pred CCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcCCCH
Confidence 9999999999999999886 459999999986 46778999999986 5666 77753
No 35
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-56 Score=551.25 Aligned_cols=186 Identities=22% Similarity=0.350 Sum_probs=151.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCC--CCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND--IHSPGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~--~~~~~l 917 (1136)
+++.+|+|+||+|++|+++||+|||||||||||++|+|... +.+|+|.+++. ..+||++|+. .+.+..
T Consensus 323 ~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~--------~~igy~~Q~~~~~l~~~~ 392 (638)
T PRK10636 323 GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG--------IKLGYFAQHQLEFLRADE 392 (638)
T ss_pred CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--------EEEEEecCcchhhCCccc
Confidence 45679999999999999999999999999999999999876 46899998742 2589999974 345667
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
|+.+++.- .. + ......+.++++.+++.. ..+..+ ..|||||||||+||++|+.+|+||||||||
T Consensus 393 ~~~~~~~~---~~-~-----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgGekqRl~La~~l~~~p~lLlLDEPt 458 (638)
T PRK10636 393 SPLQHLAR---LA-P-----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGGEKARLVLALIVWQRPNLLLLDEPT 458 (638)
T ss_pred hHHHHHHH---hC-c-----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 78776531 11 1 112345778899998853 444443 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-EeCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~~ 1054 (1136)
+|||+.+...+.+.|+++ +.|||++|||+. .+...||++++|.+ |+++ |.|+.
T Consensus 459 ~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~g~~ 512 (638)
T PRK10636 459 NHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFDGDL 512 (638)
T ss_pred CCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcCCCH
Confidence 999999999999999986 349999999976 46778999999985 6776 77765
No 36
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.9e-57 Score=549.08 Aligned_cols=197 Identities=23% Similarity=0.234 Sum_probs=161.5
Q ss_pred EEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHHHH
Q 001154 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESL 923 (1136)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e~l 923 (1136)
.|+++||+|++||++||+||||||||||+++|+|..+ +.+|+|.++ ..+||++|+..+.+.+||+|++
T Consensus 354 ~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~----------~~i~y~~Q~~~~~~~~tv~e~l 421 (590)
T PRK13409 354 SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE----------LKISYKPQYIKPDYDGTVEDLL 421 (590)
T ss_pred EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----------eeEEEecccccCCCCCcHHHHH
Confidence 4899999999999999999999999999999999876 468999886 1489999998888899999999
Q ss_pred HHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 001154 924 LFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARA 1003 (1136)
Q Consensus 924 ~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~ 1003 (1136)
.+..... .. ...++++++.+++.+..+..+ ..|||||||||+||++|+.+|+||||||||+|||+.+
T Consensus 422 ~~~~~~~-----~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~ 488 (590)
T PRK13409 422 RSITDDL-----GS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQ 488 (590)
T ss_pred HHHhhhc-----Ch---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHH
Confidence 8742111 11 124678999999987766654 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCc---hhHHHHHHHhc
Q 001154 1004 AAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK---SCELIKYFEAV 1068 (1136)
Q Consensus 1004 ~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~---~~~~~~~~~~~ 1068 (1136)
+..+++.|++++++ |.|||++|||+. .+...+|++++|+ | ++...|..... ...+-.+++.+
T Consensus 489 ~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 489 RLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHASGPMDMREGMNRFLKEL 554 (590)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeecCCchhHHHHHHHHHHHc
Confidence 99999999999764 899999999976 4667899999996 4 77766654322 12234455555
No 37
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.1e-55 Score=545.12 Aligned_cols=191 Identities=22% Similarity=0.292 Sum_probs=153.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCC-CCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND-IHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~-~~~~~lt 918 (1136)
+++.+|+|+||+|++|+++||+|||||||||||++|+|..+ +.+|+|.+ |.+. .+||++|+. .+++.+|
T Consensus 330 ~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~-------~i~y~~q~~~~l~~~~t 399 (635)
T PRK11147 330 DGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL-------EVAYFDQHRAELDPEKT 399 (635)
T ss_pred CCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc-------EEEEEeCcccccCCCCC
Confidence 45679999999999999999999999999999999999876 46899998 5321 489999975 5788999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|.|++.+..... ... .....+.++++.+++. +..+..+ ..|||||||||+||++|+.+|++|||||||+
T Consensus 400 v~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqRl~la~al~~~p~lLlLDEPt~ 469 (635)
T PRK11147 400 VMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGERNRLLLARLFLKPSNLLILDEPTN 469 (635)
T ss_pred HHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 999998753211 001 1123467788888875 3344433 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe-cCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-RGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~-~gG~~~~~g~~ 1054 (1136)
|||+.+...+.+.|+++ +.|||++|||.. .+...||++++|. +|.-+.|.|+.
T Consensus 470 ~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g~y 523 (635)
T PRK11147 470 DLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVGGY 523 (635)
T ss_pred CCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccCCH
Confidence 99999999999999875 459999999976 4667899999997 55444566654
No 38
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-55 Score=505.26 Aligned_cols=454 Identities=24% Similarity=0.368 Sum_probs=348.4
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCC
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQV 221 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 221 (1136)
...++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.++|.+..-..+ ..-|+.|.|+..++
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 3457999999999999999999999999999999999999887 9999999998764443 25689999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
|+|||.|||.++....... -.+ +..+...+...+|+.+|+....++.||+
T Consensus 96 p~LsVaeNifLgre~~~~~---g~i---------------------------d~~~m~~~A~~~l~~lg~~~~~~~~v~~ 145 (500)
T COG1129 96 PNLSVAENIFLGREPTRRF---GLI---------------------------DRKAMRRRARELLARLGLDIDPDTLVGD 145 (500)
T ss_pred CCccHHHHhhcccccccCC---Ccc---------------------------CHHHHHHHHHHHHHHcCCCCChhhhhhh
Confidence 9999999998764432210 000 0111234578899999997558888875
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
||+||||-|.||||+..++++++||||||+|+...+..+++.++++.. .+..+|.++|..+|++++||+|.||
T Consensus 146 -----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 146 -----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIADRITVL 218 (500)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999999975 4777888999999999999999999
Q ss_pred cCCeEEEecCh-hhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHh
Q 001154 382 SEGQIVYQGPR-VSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEE 460 (1136)
Q Consensus 382 ~~G~iv~~G~~-~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1136)
.+|+.+..++. .+. +.++..+
T Consensus 219 RDG~~v~~~~~~~~~--------------------------------------------~~~~lv~-------------- 240 (500)
T COG1129 219 RDGRVVGTRPTAAET--------------------------------------------SEDELVR-------------- 240 (500)
T ss_pred eCCEEeeecccccCC--------------------------------------------CHHHHHH--------------
Confidence 99999876652 111 0000000
Q ss_pred hcCcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhh
Q 001154 461 LAVPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLY 540 (1136)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~ 540 (1136)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHH
Q 001154 541 LGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFS 620 (1136)
Q Consensus 541 ~g~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~ 620 (1136)
.|+|-.
T Consensus 241 -------------------------------------------------------------------~MvGr~------- 246 (500)
T COG1129 241 -------------------------------------------------------------------LMVGRE------- 246 (500)
T ss_pred -------------------------------------------------------------------HhhCcc-------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhc
Q 001154 621 RQLLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFL 700 (1136)
Q Consensus 621 ~~~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~ 700 (1136)
T Consensus 247 -------------------------------------------------------------------------------- 246 (500)
T COG1129 247 -------------------------------------------------------------------------------- 246 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhc
Q 001154 701 GHSWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRK 780 (1136)
Q Consensus 701 ~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1136)
.. ..
T Consensus 247 ---~~------------------~~------------------------------------------------------- 250 (500)
T COG1129 247 ---LE------------------DL------------------------------------------------------- 250 (500)
T ss_pred ---hh------------------hh-------------------------------------------------------
Confidence 00 00
Q ss_pred CcchhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEE
Q 001154 781 GENVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTAL 860 (1136)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al 860 (1136)
.+. .. .. . ..+..++.++++. ...++||||++++||++||
T Consensus 251 -------~~~-~~-~~--------~------~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GEIlGi 290 (500)
T COG1129 251 -------FPE-PP-EE--------G------IGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGEILGI 290 (500)
T ss_pred -------ccc-cc-cc--------C------CCCcEEEEecCCC-----------------CCceeCceeEEeCCcEEEE
Confidence 000 00 00 0 0011122222211 1146699999999999999
Q ss_pred EccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccC---CCCCCCCcHHHHHHHHhhhcCC-
Q 001154 861 VGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQN---DIHSPGLTVLESLLFSAWLRLP- 932 (1136)
Q Consensus 861 ~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---~~~~~~ltv~e~l~~~~~lr~~- 932 (1136)
-|-=|||+|-|+++|.|..+ ..+|+|.++|+++.. ...+..++|||.| ..+++.+++.+|+.++...+..
T Consensus 291 aGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~ 368 (500)
T COG1129 291 AGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSR 368 (500)
T ss_pred eccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhcc
Confidence 99999999999999999655 458999999997643 2355679999987 5678899999999887322211
Q ss_pred C-cccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 001154 933 S-EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTV 1011 (1136)
Q Consensus 933 ~-~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l 1011 (1136)
. -++....++.+++..+.+++.--.-. ..+..||||++|||.|||.|..+|+||||||||.|+|.-+++.|.++|
T Consensus 369 ~~~i~~~~e~~~~~~~~~~l~Ik~~s~~----~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li 444 (500)
T COG1129 369 RGLIDRRKERALAERYIRRLRIKTPSPE----QPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLI 444 (500)
T ss_pred ccccChHHHHHHHHHHHHhcCcccCCcc----chhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHH
Confidence 1 24455566778888988887532211 124589999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 1012 RNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 1012 ~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
++++++|.+||++|-+.. ++...||||+||. +|+++..-+.+
T Consensus 445 ~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~-~Gri~~e~~~~ 486 (500)
T COG1129 445 RELAAEGKAILMISSELP-ELLGLSDRILVMR-EGRIVGELDRE 486 (500)
T ss_pred HHHHHCCCEEEEEeCChH-HHHhhCCEEEEEE-CCEEEEEeccc
Confidence 999999999999999986 7899999999998 57887644443
No 39
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.5e-53 Score=525.72 Aligned_cols=186 Identities=22% Similarity=0.316 Sum_probs=146.7
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHH
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e 921 (1136)
..+|+|+||+|++|+++||+|||||||||||++|+|..+ +.+|+|.+++. ..+||++|+.. ..+++.+
T Consensus 522 ~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~--------~~igyv~Q~~~--~~l~~~~ 589 (718)
T PLN03073 522 PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK--------VRMAVFSQHHV--DGLDLSS 589 (718)
T ss_pred CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--------eeEEEEecccc--ccCCcch
Confidence 469999999999999999999999999999999999876 46899998752 35899999752 3456666
Q ss_pred HHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 001154 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1136)
Q Consensus 922 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1136)
+..+......+ ... .+.+.++++.+++.+ ..+.. +..|||||||||+|||+|+.+|++|||||||+|||
T Consensus 590 ~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqkqRvaLAraL~~~p~lLLLDEPT~~LD 659 (718)
T PLN03073 590 NPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLD 659 (718)
T ss_pred hHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 54322111111 111 234678899999863 44433 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE-EeCCC
Q 001154 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI-YAGPL 1054 (1136)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~-~~g~~ 1054 (1136)
+.+...+++.|++. . .|||++|||+. .+...||++++|.+ |+++ +.|+.
T Consensus 660 ~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~~ 709 (718)
T PLN03073 660 LDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGTF 709 (718)
T ss_pred HHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCCH
Confidence 99999998888764 3 49999999976 46678999999985 6777 66653
No 40
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.7e-52 Score=495.95 Aligned_cols=220 Identities=26% Similarity=0.295 Sum_probs=172.4
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCH
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 226 (1136)
.+++++|+|+.+.+|+.++|+|+|||||||||++|+|.+.|+ +|+|...+ .-.++|++|++...+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccH
Confidence 457999999999999999999999999999999999999876 99998764 2369999999998889999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCc---hhHHHH-HHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDE---DLDIFM-KSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---d~~~~~-~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
.+.+.-+... .++...+..... ...+++ ..+.+. ....++++..+.++..+|..||++.. ++.++
T Consensus 84 ~~~v~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~-- 152 (530)
T COG0488 84 LDYVIEGFGE-----LRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS-- 152 (530)
T ss_pred HHHHHhhhHH-----HHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh--
Confidence 9999765321 112221111111 111111 111111 11234567778899999999999887 66665
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
.||||||.||+||+||+.+|++|+|||||++||..+..++-+.|++. .+ ++|+++|+...+-+.|++|+-++
T Consensus 153 ---~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 153 ---SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred ---hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEec
Confidence 59999999999999999999999999999999999999999999853 34 66779999999999999999999
Q ss_pred CCeEE-EecChhhHH
Q 001154 383 EGQIV-YQGPRVSVL 396 (1136)
Q Consensus 383 ~G~iv-~~G~~~~~~ 396 (1136)
.|++. |.|..+...
T Consensus 225 ~g~l~~y~Gny~~~~ 239 (530)
T COG0488 225 RGKLTPYKGNYSSYL 239 (530)
T ss_pred CCceeEecCCHHHHH
Confidence 99875 677665443
No 41
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.3e-50 Score=455.17 Aligned_cols=458 Identities=21% Similarity=0.314 Sum_probs=352.6
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVA 222 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 222 (1136)
...+++|||+++++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|++..-..| +.-||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 567999999999999999999999999999999999999987 9999999998765444 246899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
++||.|||..+..-.. +.+. +..+...+++++.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~-~~~~------------------------------~~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSK-GGLI------------------------------DRRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCcccc-cccc------------------------------CHHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 9999999988754210 0000 0111234588999999999988888876
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
||-||||||.|-++|+.+|++|+|||||+-|-|....++++.|++++.. +.+||.++|-..|+.++||++.+|.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~--G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAE--GKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHHHhhCeeEEEe
Confidence 9999999999999999999999999999999999999999999999863 5667779999999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhcCcccccccccCCCCCCCCCChhHHHHHHHhCccccchhHhhc
Q 001154 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVTSKKDQEQYWSNPYLPYRYISPGKFAEAFHSYHTGKNLSEELA 462 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (1136)
.|+++-.-++ .. + .+..++++.
T Consensus 215 ~Gkvvgt~~~----------------~~-------------~--------------~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP----------------VA-------------E--------------TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC----------------CC-------------C--------------CCHHHHHHH---------------
Confidence 9998643210 00 0 000000000
Q ss_pred CcccccCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhHH
Q 001154 463 VPFDRRFNHPAALSTSKYGEKRSELLKTSFNWQLLLMKRNSFIYVFKFIQLLIVALITMTVFFRTTMHHKTIDDGGLYLG 542 (1136)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g 542 (1136)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccccchhhHHHHHHHHhhhHHHHhhhHhhheeeeeccccccHHHHHHH
Q 001154 543 ALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTIPSWALSIPTSLIESGFWVAVTYYVIGYDPNVVRFSRQ 622 (1136)
Q Consensus 543 ~lf~~l~~~~~~~~~~~~~~~~~~~v~~k~r~~~~y~~~ay~l~~~~~~lP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 622 (1136)
|+|-.
T Consensus 237 ------------------------------------------------------------------MvG~~--------- 241 (501)
T COG3845 237 ------------------------------------------------------------------MVGRE--------- 241 (501)
T ss_pred ------------------------------------------------------------------hcCCc---------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHhhccccCCCcchhHHHHHhhCHHHHHHHHHHHhhhcCC
Q 001154 623 LLLYFFLHQMSIGLFRVIGSLGRNMIVANTFGSFAMLVVMALGGFIISRDSIPKWWIWGFWVSPLMYAQNAASVNEFLGH 702 (1136)
Q Consensus 623 ~l~~~l~~~~~~~l~~~i~~~~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 702 (1136)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T COG3845 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCchhHHHhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccchhhhhhHhhhhcCc
Q 001154 703 SWDKKAGNSNFSLGEAILRQRSLFPESYWYWIGVGAMLGYTLLFNALFTFFLSYLNPLGKQQAVVSKKELQERDRRRKGE 782 (1136)
Q Consensus 703 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (1136)
+. ..
T Consensus 242 ----------------v~-----------------------------------------------~~------------- 245 (501)
T COG3845 242 ----------------VV-----------------------------------------------LR------------- 245 (501)
T ss_pred ----------------cc-----------------------------------------------cc-------------
Confidence 00 00
Q ss_pred chhHHhhhhhhccccccCcccccCCcccccccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEc
Q 001154 783 NVVIELREYLQRSSSLNGKYFKQKGMVLPFQPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVG 862 (1136)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G 862 (1136)
.+. .. ...| +..+..++++...+ .+...+++|||++++||++||.|
T Consensus 246 -----~~~----~~-------~~pg------~~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvGIAG 291 (501)
T COG3845 246 -----VVK----PP-------STPG------EVVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVGIAG 291 (501)
T ss_pred -----ccc----CC-------CCCC------CeEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEEEEe
Confidence 000 00 0000 11233444432211 22467889999999999999999
Q ss_pred cCCCChhHHHhcccCCCCCceeEEEEEEcCccC----Ch-hcccceEEEeccCC---CCCCCCcHHHHHHHHhhhcC---
Q 001154 863 VSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK----RQ-ETFARISGYCEQND---IHSPGLTVLESLLFSAWLRL--- 931 (1136)
Q Consensus 863 ~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~----~~-~~~~~~~gyv~Q~~---~~~~~ltv~e~l~~~~~lr~--- 931 (1136)
..|-|-+.|+.+|+|..+ +.+|+|.++|.++ .. ...+..+||||.+. .+.+.+|+.||+.+...-+.
T Consensus 292 V~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~ 369 (501)
T COG3845 292 VAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFS 369 (501)
T ss_pred cCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccc
Confidence 999999999999999875 3459999999986 22 22345689999985 46789999999987643211
Q ss_pred -CCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH
Q 001154 932 -PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRT 1010 (1136)
Q Consensus 932 -~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1010 (1136)
..-......++...++++.++....... .....||||++||+-+||+|..+|++|++.+||-|||..+.+.|.+.
T Consensus 370 ~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~ 445 (501)
T COG3845 370 RGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHER 445 (501)
T ss_pred cccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHH
Confidence 1124455667788899999888632211 12457999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 1011 VRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 1011 l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
|.+.++.|+.|++++-+.+ ++++.+|||.||. +|+++...+..+
T Consensus 446 l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~-~Gri~~~~~~~~ 489 (501)
T COG3845 446 LLELRDAGKAVLLISEDLD-EILELSDRIAVIY-EGRIVGIVPPEE 489 (501)
T ss_pred HHHHHhcCCEEEEEehhHH-HHHHhhheeeeee-CCceeccccccc
Confidence 9999999999999999997 7999999999998 579987777653
No 42
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.7e-52 Score=504.01 Aligned_cols=263 Identities=44% Similarity=0.773 Sum_probs=243.9
Q ss_pred ccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc-eeEEEEEEc
Q 001154 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYIS 891 (1136)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~ 891 (1136)
.+..+.|+++++..+.+.. ..+++|+|||+.++|||++||||||||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3567888888877643211 4589999999999999999999999999999999999998764 689999999
Q ss_pred CccCChhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 001154 892 GYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLST 971 (1136)
Q Consensus 892 g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSg 971 (1136)
|++.....+++.+|||+|+|.++|++||+|++.|+|.+|+|.+.+.++++++|+++++.++|.+++|.++|.+..+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988889999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 001154 972 EQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1136)
Q Consensus 972 Gqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1051 (1136)
||||||+||.+|+.+|+||||||||||||+.++..++++|++++++|+|||||+|||+.++++.||++++|.+ |+++|.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 699999
Q ss_pred CCCCCchhHHHHHHHhcCCCCCCCCCCCccceeeeecCC
Q 001154 1052 GPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSP 1090 (1136)
Q Consensus 1052 g~~~~~~~~~~~~~~~~~g~~~~~~~~npa~~~l~~~~~ 1090 (1136)
|+. .++.+||+.+ |. +||+++|||||.+|+++.
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~ 285 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSV 285 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHcc
Confidence 996 6889999998 76 599999999999999884
No 43
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.1e-46 Score=464.54 Aligned_cols=270 Identities=35% Similarity=0.589 Sum_probs=234.6
Q ss_pred cceeeeecceeeeeccc----------------cccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccC
Q 001154 814 PLSMAFGNINYFVDVPV----------------ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAG 877 (1136)
Q Consensus 814 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g 877 (1136)
+.++.|.++.|.++... ..++..+.++++.+|+|||+++++||++||+|||||||||||++|+|
T Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG 116 (659)
T PLN03211 37 PITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAG 116 (659)
T ss_pred ceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 56788999999876432 12233445567889999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccc
Q 001154 878 RKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS 957 (1136)
Q Consensus 878 ~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~ 957 (1136)
+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|.+.++.+.....+++++.++++++.++|.+++
T Consensus 117 ~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 195 (659)
T PLN03211 117 RIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCE 195 (659)
T ss_pred CCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhc
Confidence 876444689999999876433 3456899999999999999999999988777654445555667789999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcC
Q 001154 958 GALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFD 1037 (1136)
Q Consensus 958 ~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d 1037 (1136)
|+.++....++||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.||
T Consensus 196 ~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D 275 (659)
T PLN03211 196 NTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFD 275 (659)
T ss_pred CceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Confidence 98888766789999999999999999999999999999999999999999999999988899999999999866889999
Q ss_pred EEEEEecCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCCCCccceeeeecCCc
Q 001154 1038 ELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPGYNPAAWMLEVTSPV 1091 (1136)
Q Consensus 1038 ~~~~l~~gG~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~npa~~~l~~~~~~ 1091 (1136)
++++|+ +|+++|.|+. +++++||+++ |. +||+++|||||++|+++..
T Consensus 276 ~iilL~-~G~iv~~G~~----~~~~~~f~~~-G~-~~P~~~NpADf~ldv~~~~ 322 (659)
T PLN03211 276 SVLVLS-EGRCLFFGKG----SDAMAYFESV-GF-SPSFPMNPADFLLDLANGV 322 (659)
T ss_pred eEEEec-CCcEEEECCH----HHHHHHHHHC-CC-CCCCCCCHHHHHHHHcCcc
Confidence 999998 5799999985 6899999998 65 6999999999999998753
No 44
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-46 Score=378.76 Aligned_cols=213 Identities=27% Similarity=0.383 Sum_probs=187.6
Q ss_pred cccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCC----hhcccceEEE
Q 001154 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGY 906 (1136)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~gy 906 (1136)
++++..+.++..++|+|||++|++||+++|+|||||||||||+||.++.. +.+|+|.++|.++. -...|+.+|+
T Consensus 4 ~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGm 81 (240)
T COG1126 4 EIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGM 81 (240)
T ss_pred EEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCe
Confidence 34555666789999999999999999999999999999999999999887 56999999997543 2457888999
Q ss_pred eccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 001154 907 CEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1136)
Q Consensus 907 v~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~ 986 (1136)
|+|+..+||++||.||+.++...- ...++++.++...++|+.+||.+.+|.+. .+|||||||||+|||||+.+
T Consensus 82 VFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGGQqQRVAIARALaM~ 154 (240)
T COG1126 82 VFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMD 154 (240)
T ss_pred ecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcHHHHHHHHHHHHcCC
Confidence 999999999999999999875322 23456677778889999999999888763 58999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+++++|||||+|||+...++.+.+++++++|.|.||+||++.+ .-+.+||+++|+ +|+++..|++
T Consensus 155 P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g~p 220 (240)
T COG1126 155 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEGPP 220 (240)
T ss_pred CCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEecCH
Confidence 99999999999999999999999999999999999999999874 667899999998 5889988865
No 45
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=4.8e-46 Score=459.72 Aligned_cols=270 Identities=38% Similarity=0.648 Sum_probs=237.1
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc-eeEEEEEEcCccCChhcccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3577999999999999999999999999999999999987643 358999999998766667888999999999999999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPG-INGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~-~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|+||+.|++.++.+.....+++++.++++++.++|.+++|+.+|.++ .++|||||||||+||+||+.+|+||||||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999988877666667777889999999999999999998653 46899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCchhHHHHHHHhcCCCCCCCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFEAVEGVPKIRPG 1077 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 1077 (1136)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.|+. +++.+||+++ |. +||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~-~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GH-PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CC-CCCCC
Confidence 9999999999999999988899999999999878999999999998 5899999996 5789999998 65 79999
Q ss_pred CCccceeeeecCCccccccC-----CcHHHHhccChHHHHHHhh
Q 001154 1078 YNPAAWMLEVTSPVEESRLG-----VDFAEIYRRSNLFQYVHVL 1116 (1136)
Q Consensus 1078 ~npa~~~l~~~~~~~~~~~~-----~~~~~~~~~s~~~~~~~~~ 1116 (1136)
.|||||++|+++...+.+.. .++.+.|+.|+.+++..+.
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 312 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVN 312 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHH
Confidence 99999999998754332111 3567788888777665443
No 46
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2.1e-43 Score=397.38 Aligned_cols=202 Identities=20% Similarity=0.268 Sum_probs=154.3
Q ss_pred ceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCcc
Q 001154 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1136)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1136)
..+.++|+.+.++ ++..++++++|.+.+++.+|+||||||||||||+++.|... +..|.|.-.-+.
T Consensus 388 pvi~~~nv~F~y~------------~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYS------------DNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCC------------CcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--cccccccccccc
Confidence 3456667665442 22368899999999999999999999999999999999876 457776543321
Q ss_pred CChhcccceEEEeccC--CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 001154 895 KRQETFARISGYCEQN--DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 972 (1136)
Q Consensus 895 ~~~~~~~~~~gyv~Q~--~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgG 972 (1136)
++++..|+ +.+.-..++.|+++=. .+ ...+.+.+..++..+||....... ..++||+|
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~~----~~----~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~G 513 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMPK----FP----DEKELEEMRSILGRFGLTGDAQVV----PMSQLSDG 513 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHHh----cc----ccchHHHHHHHHHHhCCCcccccc----chhhcccc
Confidence 23344443 2333455677766421 11 123445678899999998544432 24689999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 973 qrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
||+||.+|+.++..|.||+|||||+|||..+...+.++|.+. ..+||+++||..+ +-..++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999998874 5689999999864 778899999999988889999
Q ss_pred CC
Q 001154 1053 PL 1054 (1136)
Q Consensus 1053 ~~ 1054 (1136)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 75
No 47
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-43 Score=358.90 Aligned_cols=221 Identities=27% Similarity=0.382 Sum_probs=187.9
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC----CCCceEEEEeccCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----VPPRTSAYVSQQDWQVA 222 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 222 (1136)
+..+|+|||++|++||+++|+|||||||||||++|.|+-.++ +|+|.++|.++... ..++.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 457999999999999999999999999999999999988776 99999999765322 23578999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
++||.||+..+...-. .....+++.+..++|+.+||.+.+|...
T Consensus 91 HlTvleNv~lap~~v~---------------------------------~~~k~eA~~~A~~lL~~VGL~~ka~~yP--- 134 (240)
T COG1126 91 HLTVLENVTLAPVKVK---------------------------------KLSKAEAREKALELLEKVGLADKADAYP--- 134 (240)
T ss_pred cchHHHHHHhhhHHHc---------------------------------CCCHHHHHHHHHHHHHHcCchhhhhhCc---
Confidence 9999999988643211 0111223445788999999999988654
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
..|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++. +.|.+.++|....+.+.+|||+.|+
T Consensus 135 --~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~VadrviFmd 210 (240)
T COG1126 135 --AQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVADRVIFMD 210 (240)
T ss_pred --cccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhheEEEee
Confidence 579999999999999999999999999999999999999999999999974 5666668899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHh
Q 001154 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQE 418 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~ 418 (1136)
+|+++..|+++++ |..|.+....+|+..
T Consensus 211 ~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 211 QGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred CCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999998876 456766667777754
No 48
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3e-43 Score=362.39 Aligned_cols=230 Identities=25% Similarity=0.351 Sum_probs=195.8
Q ss_pred cccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceE
Q 001154 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARIS 904 (1136)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~ 904 (1136)
++++..+.++++.+++||+++|++||+++||||||+||||||++|.|..+ +.+|+|.++|.++.+ ...++++
T Consensus 10 ~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i~~ls~~~~~~ir~r~ 87 (263)
T COG1127 10 EVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDIPQLSEEELYEIRKRM 87 (263)
T ss_pred EEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcchhccCHHHHHHHHhhe
Confidence 33444555688999999999999999999999999999999999999887 569999999988642 2457789
Q ss_pred EEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHH
Q 001154 905 GYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVEL 983 (1136)
Q Consensus 905 gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL 983 (1136)
|+++|+-.+|..+||+||+.|.. |...+.+.+..++.+..-++++||... .+.. +.+||||++||++|||||
T Consensus 88 GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsELSGGM~KRvaLARAi 160 (263)
T COG1127 88 GVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSELSGGMRKRVALARAI 160 (263)
T ss_pred eEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chhhcchHHHHHHHHHHH
Confidence 99999999999999999999864 333456667777888888999999876 4443 358999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCch----
Q 001154 984 VANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKS---- 1058 (1136)
Q Consensus 984 ~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~---- 1058 (1136)
+.+|+|||+||||+||||.++..+-++|+++.++ |.|+|++|||.+ .++..+|++++|.+ |+++..|+..+..
T Consensus 161 aldPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gkv~~~Gt~~el~~sd~ 238 (263)
T COG1127 161 ALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GKVIAEGTPEELLASDD 238 (263)
T ss_pred hcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CEEEEeCCHHHHHhCCC
Confidence 9999999999999999999999999999999876 999999999987 68899999999985 7999999975421
Q ss_pred hHHHHHHHhcCCC
Q 001154 1059 CELIKYFEAVEGV 1071 (1136)
Q Consensus 1059 ~~~~~~~~~~~g~ 1071 (1136)
.-+.+||....+-
T Consensus 239 P~v~qf~~G~~~g 251 (263)
T COG1127 239 PWVRQFFNGIRDG 251 (263)
T ss_pred HHHHHHhcCCCCC
Confidence 1256788765543
No 49
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.6e-43 Score=374.80 Aligned_cols=214 Identities=27% Similarity=0.401 Sum_probs=185.2
Q ss_pred ccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccC
Q 001154 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQN 910 (1136)
Q Consensus 834 ~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~ 910 (1136)
+.+..|+++.+|+|+||++++|++++|+|||||||||||++|+|..+ +.+|+|.++|+++.. +.+++.+||+||.
T Consensus 7 ~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~ 84 (258)
T COG1120 7 NLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIASLSPKELAKKLAYVPQS 84 (258)
T ss_pred EEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchhhcCHHHHhhhEEEeccC
Confidence 33444578899999999999999999999999999999999999877 468999999998643 5678899999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 001154 911 DIHSPGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1136)
......+||+|.+.++..-+.. .....+++++.++++|+.+++.+++++.+ .+||||||||+.|||||+++|+|
T Consensus 85 ~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGGerQrv~iArALaQ~~~i 159 (258)
T COG1120 85 PSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGGERQRVLIARALAQETPI 159 (258)
T ss_pred CCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChhHHHHHHHHHHHhcCCCE
Confidence 9888899999999987432211 11223445567999999999999999875 47999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 990 VFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
|+||||||+||...+..+++.++++++ +|.|||+++||++. .+..||++++|+ +|++++.|++.+
T Consensus 160 LLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk-~G~i~a~G~p~e 225 (258)
T COG1120 160 LLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLK-DGKIVAQGTPEE 225 (258)
T ss_pred EEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEE-CCeEEeecCcch
Confidence 999999999999999999999999984 59999999999984 788999999998 589999998754
No 50
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-43 Score=372.78 Aligned_cols=204 Identities=25% Similarity=0.364 Sum_probs=183.5
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCCCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 914 (1136)
...+|+|||++|++||++||+|+||||||||++|+.++.. |.+|+|.++|.++.. ...|+.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 4689999999999999999999999999999999999887 569999999976532 34678899999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
...||.||+.|...+.. .++++.++++.++++.+||.+.++.+. .+|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999877653 567888899999999999998888753 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
|||+|||.+.+.|.+.|+++.++ |.|||++||+++. +-+.|||+.||+ .|+++..|+..+
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~-~G~lvE~G~v~~ 228 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLD-QGRLVEEGTVSE 228 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEee-CCEEEEeccHHH
Confidence 99999999999999999999754 9999999999764 667899999998 589999998743
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=367.58 Aligned_cols=208 Identities=26% Similarity=0.421 Sum_probs=177.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCC--CCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI--HSPGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~--~~~~l 917 (1136)
++.++|+||||+|++|+++||+||||||||||+++|+|..+ +.+|+|.+.|.+.....-+..+|||||... ....+
T Consensus 15 ~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~ 92 (254)
T COG1121 15 GNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPI 92 (254)
T ss_pred CCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccccccccCCeEEEcCcccccCCCCCc
Confidence 43369999999999999999999999999999999999776 568999999998765444578999999542 22347
Q ss_pred cHHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 918 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
||+|-+..+...+.. .....+++++.++++|+.+|+.+++++.++ +|||||+||+.|||||+++|++|+|||||
T Consensus 93 tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGGQ~QRV~lARAL~~~p~lllLDEP~ 167 (254)
T COG1121 93 TVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGGQKQRVLLARALAQNPDLLLLDEPF 167 (254)
T ss_pred CHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcHHHHHHHHHHHhccCCCEEEecCCc
Confidence 999999886433221 011223446789999999999999998875 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCc
Q 001154 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1136)
+|+|+.++..++++|++++++|+||++++||++ .+.+.||++++|+ +++++.|+..+.
T Consensus 168 ~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G~~~~~ 225 (254)
T COG1121 168 TGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASGPPEEV 225 (254)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEeccChhhc
Confidence 999999999999999999988999999999998 5889999999996 589999998653
No 52
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-42 Score=387.10 Aligned_cols=209 Identities=32% Similarity=0.448 Sum_probs=185.3
Q ss_pred ccccccC-ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccC
Q 001154 834 QEGVLED-RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQN 910 (1136)
Q Consensus 834 ~~~~~~~-~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~ 910 (1136)
+.++.++ ++.+|+||||+|++||++||+|||||||||||++|+|... +.+|+|.++|.+... ...++.+||++|+
T Consensus 9 ~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~~~~~~~~~~igy~~~~ 86 (293)
T COG1131 9 NLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVVKEPAKVRRRIGYVPQE 86 (293)
T ss_pred ceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCccCHHHHHhheEEEccC
Confidence 3444567 5899999999999999999999999999999999999887 468999999987654 4567889999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
+.+++.+||+|+|.|.+.++.+.. ...++.++++++.++|.+..+..+ ++||+||||||+||+||+++|++|
T Consensus 87 ~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~kqrl~ia~aL~~~P~ll 158 (293)
T COG1131 87 PSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGMKQRLSIALALLHDPELL 158 (293)
T ss_pred CCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999886542 345567899999999998554443 589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTG-RTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g-~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||||+||||.++..+++.|++++++| +||+++||+++ ++...||++++|+ +|++++.|+.
T Consensus 159 iLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~-~G~~~~~g~~ 221 (293)
T COG1131 159 ILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILN-DGKIIAEGTP 221 (293)
T ss_pred EECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEe-CCEEEEeCCH
Confidence 9999999999999999999999999887 89999999987 6778899999998 5899999975
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-43 Score=359.67 Aligned_cols=211 Identities=25% Similarity=0.343 Sum_probs=187.5
Q ss_pred cccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEecc
Q 001154 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQ 909 (1136)
Q Consensus 833 ~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q 909 (1136)
++.++.++++.+++|+|++|++||+++++|||||||||+|++|.++.. +.+|+|+|||.++.. ...||.+|||-|
T Consensus 5 ~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYviQ 82 (309)
T COG1125 5 ENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVIQ 82 (309)
T ss_pred eeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhhh
Confidence 344455678899999999999999999999999999999999999887 579999999998754 467899999999
Q ss_pred CCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 001154 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1136)
Q Consensus 910 ~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1136)
.-.+||++||.||+.+-..+. ..++++.+++++|+|++++|.+ +++++ +++|||||+|||.+||||+++|
T Consensus 83 qigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 83 QIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred hcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCC
Confidence 999999999999998876554 4567778889999999999975 56654 3689999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+||+||||+++|||.++..+++.++++.++ |+|||++|||.+ +.+..+||+++|+ +|+++..+++.
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P~ 221 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTPD 221 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCHH
Confidence 999999999999999999999999999765 999999999987 7899999999998 57888877754
No 54
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-42 Score=360.84 Aligned_cols=196 Identities=26% Similarity=0.374 Sum_probs=174.2
Q ss_pred cccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCC
Q 001154 837 VLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 837 ~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ 916 (1136)
+.++...+|+|||++|.+||+++|+|||||||||||++|+|..+ +.+|+|.++|.++. .....+|||+|++.++|-
T Consensus 11 ~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW 86 (248)
T COG1116 11 KSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPVT--GPGPDIGYVFQEDALLPW 86 (248)
T ss_pred EEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCcccC--CCCCCEEEEeccCcccch
Confidence 33456889999999999999999999999999999999999987 56899999998862 234568999999999999
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
+||+||+.|+...+. ....+..+.++++++.+||.+..+... ++|||||||||+|||||+.+|+||+||||+
T Consensus 87 ~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQRVaiARAL~~~P~lLLlDEPF 158 (248)
T COG1116 87 LTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQRVAIARALATRPKLLLLDEPF 158 (248)
T ss_pred hhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999999876653 344556678999999999999988763 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 997 SGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
++||+.++..+++.|.++.+ .++|||++|||.+ +....+|||++|.++
T Consensus 159 gALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 159 GALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred chhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999875 5899999999987 677889999999864
No 55
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-42 Score=364.19 Aligned_cols=224 Identities=27% Similarity=0.384 Sum_probs=194.2
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCC
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDW 219 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~ 219 (1136)
...++|+|||+.|++|++++|+|+||||||||++++.++-.|+ +|+|.++|.++.... .++.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3568999999999999999999999999999999999998877 999999998876653 2578999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 299 (1136)
++...||.||++|..+..+... .+.+.++.++|+.+||++.+|...
T Consensus 94 LLssrTV~~NvA~PLeiag~~k----------------------------------~ei~~RV~elLelVgL~dk~~~yP 139 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVPK----------------------------------AEIKQRVAELLELVGLSDKADRYP 139 (339)
T ss_pred ccccchHHhhhhhhHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhccCc
Confidence 9999999999999887765321 122457999999999998887654
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
.+|||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++.+++ +.||+.++|-++-+.+.||||.
T Consensus 140 -----~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 140 -----AQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred -----hhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 5799999999999999999999999999999999999999999999999876 4566668899999999999999
Q ss_pred EEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhhc
Q 001154 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEVT 420 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~ 420 (1136)
+|++|++++.|+..++ |..|.+.-.-+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999998887 34566655566666544
No 56
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-42 Score=352.63 Aligned_cols=210 Identities=26% Similarity=0.371 Sum_probs=184.8
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 223 (1136)
.+.+++|+|++|++||+++++|||||||||+||+|.+++.|+ +|+|.+||.++.+.. .+|.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 456999999999999999999999999999999999999887 999999999987764 46899999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||.|||.+...+.+-.. ++.+.+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 999999998766554221 1234569999999999752 122456
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
...|||||+|||.+||||+.+|+|++||||+++|||-++.++.+.++++.+.+++| ||.++|+.+|++.++|||++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kT-ivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKT-IVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCE-EEEEecCHHHHHhhhceEEEecC
Confidence 67899999999999999999999999999999999999999999999998877554 55688999999999999999999
Q ss_pred CeEEEecChhhHHH
Q 001154 384 GQIVYQGPRVSVLD 397 (1136)
Q Consensus 384 G~iv~~G~~~~~~~ 397 (1136)
|+++..+++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999874
No 57
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-42 Score=352.97 Aligned_cols=217 Identities=27% Similarity=0.364 Sum_probs=183.4
Q ss_pred cccccc-CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEE
Q 001154 834 QEGVLE-DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGY 906 (1136)
Q Consensus 834 ~~~~~~-~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy 906 (1136)
++.+.+ +++++|+|||+.|++||++||+|||||||||||++|.|... +.+|+|.++|..+.. ..+++.+||
T Consensus 8 nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i~~~~~k~lr~~r~~iGm 85 (258)
T COG3638 8 NLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQITKLKGKELRKLRRDIGM 85 (258)
T ss_pred eeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccchhccchHHHHHHHHhcee
Confidence 333444 67899999999999999999999999999999999999766 568999999976432 346788999
Q ss_pred eccCCCCCCCCcHHHHHHHHhhhcCC-----CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHH
Q 001154 907 CEQNDIHSPGLTVLESLLFSAWLRLP-----SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAV 981 (1136)
Q Consensus 907 v~Q~~~~~~~ltv~e~l~~~~~lr~~-----~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~ 981 (1136)
++|++.+.+.+||.+|++.+..-+.+ -....++.+..+-++++.+|+.+.+-... ..|||||+|||+|||
T Consensus 86 IfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra-----~~LSGGQQQRVaIAR 160 (258)
T COG3638 86 IFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA-----STLSGGQQQRVAIAR 160 (258)
T ss_pred EeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh-----ccCCcchhHHHHHHH
Confidence 99999999999999999876422211 12333455667788999999988776654 479999999999999
Q ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCchh
Q 001154 982 ELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSC 1059 (1136)
Q Consensus 982 aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~ 1059 (1136)
||+.+|+||+.|||+++|||.+++.||+.|+++++ .|.|||++.|+.++ ..++|||++-|+ .|+++|+||..+...
T Consensus 161 aL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~-~G~ivfDg~~~el~~ 237 (258)
T COG3638 161 ALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK-AGRIVFDGPASELTD 237 (258)
T ss_pred HHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec-CCcEEEeCChhhhhH
Confidence 99999999999999999999999999999999975 59999999999875 668899999998 589999999865433
No 58
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-42 Score=343.45 Aligned_cols=207 Identities=26% Similarity=0.356 Sum_probs=185.9
Q ss_pred cccCceE-EEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCC--hhcccceEEEeccCCCC
Q 001154 837 VLEDRLQ-LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR--QETFARISGYCEQNDIH 913 (1136)
Q Consensus 837 ~~~~~~~-~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~--~~~~~~~~gyv~Q~~~~ 913 (1136)
+.++.++ +++||||+++.||++||+|+|||||||+|++|+++.. |.+|.|+++|.+.. +...++.+|.++.+..+
T Consensus 9 K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~gl 86 (245)
T COG4555 9 KSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGL 86 (245)
T ss_pred hhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcCh
Confidence 3344443 8999999999999999999999999999999999887 56999999998753 34578899999988889
Q ss_pred CCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 914 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
+..+|++|||.|.+.+.. ....+.+++++++.+.++|.++.|+.++ +||.|+||||+|||||+++|++++||
T Consensus 87 Y~RlT~rEnl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlD 158 (245)
T COG4555 87 YARLTARENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLD 158 (245)
T ss_pred hhhhhHHHHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEc
Confidence 999999999999998763 4456677889999999999999999875 79999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|||||||..+.+.+.+.++++.+.|++||++||.++ ++.+.||+++++++ |++++.|...
T Consensus 159 EP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 159 EPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred CCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999999999888999999999986 67789999999985 7999999864
No 59
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=361.12 Aligned_cols=210 Identities=29% Similarity=0.420 Sum_probs=187.5
Q ss_pred ccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCc---cCCh-hcccceEEEeccCC
Q 001154 836 GVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY---PKRQ-ETFARISGYCEQND 911 (1136)
Q Consensus 836 ~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~ 911 (1136)
.+..+...+++|||++|+.||++||+|||||||||||++|||+.+ +..|.|.+||. +... ....|.+|||+|+.
T Consensus 9 ~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~Y 86 (345)
T COG1118 9 KKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHY 86 (345)
T ss_pred hhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEech
Confidence 344567789999999999999999999999999999999999988 56999999998 4433 34567899999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+|+.|||.+|+.|+...+ ....+..+.+.+++++|++++|.++++.+. .+|||||||||++||||+.+|++|+
T Consensus 87 ALF~HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGGQrQRVALARALA~eP~vLL 160 (345)
T COG1118 87 ALFPHMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGGQRQRVALARALAVEPKVLL 160 (345)
T ss_pred hhcccchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChHHHHHHHHHHHhhcCCCeEe
Confidence 9999999999999998766 233456677889999999999999998763 5899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||||+++||+.-+..+.+.|+++.++ |.|+|++|||+. ++.+.+||+++|++ |+|+..||..
T Consensus 161 LDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 161 LDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred ecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 99999999999999999999999876 999999999986 79999999999985 7999888864
No 60
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-41 Score=375.95 Aligned_cols=217 Identities=29% Similarity=0.420 Sum_probs=193.7
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCHHH
Q 001154 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRE 228 (1136)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 228 (1136)
+|+|+|++|++||+++|+|||||||||||++|||+..++ +|+|.++|.++++..+ +|.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 999999999999999999999999999999999999887 9999999999998766 489999999999999999999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 001154 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1136)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LS 308 (1136)
||.|+.+.++... .+.+.+++++.+.|+|++..|... ++||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~P-----~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRKP-----LQLS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9999988765321 112456999999999999988654 5799
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001154 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1136)
Q Consensus 309 GGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 388 (1136)
|||||||++||||+.+|++++||||+|.||+..+.++...++++.+.++ +|+|.++|+..|+..++|+|++|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~-~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLG-TTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcC-CcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999999877664 556668899999999999999999999999
Q ss_pred ecChhhHHHHHHhcCCCCCCCCChHHHHH
Q 001154 389 QGPRVSVLDFFASMGFSCPKRKNVADFLQ 417 (1136)
Q Consensus 389 ~G~~~~~~~~F~~~Gf~cp~~~~~adfl~ 417 (1136)
.|++.++ |..|.+.-+|.|+-
T Consensus 215 ~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred cCChHHH--------hhCccchhhhhhcC
Confidence 9999998 44677777777764
No 61
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.2e-41 Score=376.21 Aligned_cols=212 Identities=32% Similarity=0.472 Sum_probs=185.7
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC--CCCceEEEEeccCCCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 224 (1136)
.+.+|+|||+.|++|++++|+|||||||||||++|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 357999999999999999999999999999999999999886 99999999887642 3457899999999999999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||+|||.|.+++.+.... ....+++++++.+||++.+++. +
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~~-----~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANKK-----V 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCcc-----h
Confidence 999999999888754310 0123589999999999855444 4
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
++||+||||||+||.||+++|++|||||||+|||+.++.++++.|+++++. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999999875 4467777889999999999999999999
Q ss_pred eEEEecChhhHHHHHHh
Q 001154 385 QIVYQGPRVSVLDFFAS 401 (1136)
Q Consensus 385 ~iv~~G~~~~~~~~F~~ 401 (1136)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999887766543
No 62
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-41 Score=358.10 Aligned_cols=223 Identities=30% Similarity=0.450 Sum_probs=188.4
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCc---cCCCCC-CCceEEEEeccCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH---GFKEFV-PPRTSAYVSQQDWQVA 222 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~---~~~~~~-~~~~~~yv~Q~d~~~~ 222 (1136)
...+++|||+.|+.||+++|+|||||||||||++|||+..|+ +|.|.+||. +.+... ..|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 356899999999999999999999999999999999999887 999999999 555533 3488999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
+|||.+||.|+.+++... | +..+.+.++.++|+.+.|++.++.
T Consensus 91 HmtVa~NIAFGl~~~~~~-------------------p-------------~~~~~r~rv~elL~lvqL~~la~r----- 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKER-------------------P-------------SEAEIRARVEELLRLVQLEGLADR----- 133 (345)
T ss_pred cchHHhhhhhcccccccC-------------------C-------------ChhhHHHHHHHHHHHhcccchhhc-----
Confidence 999999999998776211 0 011224568899999999887664
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
+..+|||||||||++||||+..|++|+||||+++||...+..+-+.|+++....+.|+ +.++|+..|++++||+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~tt-vfVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTT-VFVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceE-EEEeCCHHHHHhhcceEEEec
Confidence 5678999999999999999999999999999999999999999999999887665555 458899999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHh
Q 001154 383 EGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQE 418 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~ 418 (1136)
+|+|...||++++. ..|...-++.|+-+
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999984 34554444555433
No 63
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.5e-41 Score=351.62 Aligned_cols=193 Identities=30% Similarity=0.456 Sum_probs=167.0
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~ 914 (1136)
..+|++||++|++||++||||||||||||||++|.|... +.+|.|.++|.++.. ..+++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 689999999999999999999999999999999999887 468999999976532 12355799999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSG-ALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~-~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
|.+||+||+.+...+.... ....++.++++++.++|.+..+ .. +.+|||||||||+|||||+.+|+|||.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999876554322 2245667889999999986655 33 3589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGG 1046 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG 1046 (1136)
|||.+||+.+...|+++++++.++ |+|||++|||+ .+...|||++.|.+|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999765 99999999996 4778999999998653
No 64
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.2e-41 Score=373.12 Aligned_cols=212 Identities=27% Similarity=0.368 Sum_probs=188.8
Q ss_pred cccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCC
Q 001154 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQND 911 (1136)
Q Consensus 833 ~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~ 911 (1136)
++..+.+++..+|+|||++|++||.++|+|||||||||||++|||+.. +.+|+|.|+|.+++. ....|.+|+|+|+.
T Consensus 7 ~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~y 84 (338)
T COG3839 7 KNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNY 84 (338)
T ss_pred eeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCc
Confidence 344445565559999999999999999999999999999999999987 579999999998866 34568899999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.++|++||+||+.|+..++. .++++.+++++++.+.|++.++.++.. .+|||||||||+|||||+++|++++
T Consensus 85 ALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQrQRVAlaRAlVr~P~v~L 156 (338)
T COG3839 85 ALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQRQRVALARALVRKPKVFL 156 (338)
T ss_pred cccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhHHHHHHHHHHhcCCCEEE
Confidence 99999999999999987663 456777889999999999999998763 5899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
||||.|+||+..+..+...|+++.++ |.|+|.+|||. .+....+|++++|+ +|++...|++.+
T Consensus 157 ~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq-~EAmtladri~Vm~-~G~i~Q~g~p~e 220 (338)
T COG3839 157 LDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQ-VEAMTLADRIVVMN-DGRIQQVGTPLE 220 (338)
T ss_pred ecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCH-HHHHhhCCEEEEEe-CCeeeecCChHH
Confidence 99999999999999999999998765 99999999997 48889999999998 689999997643
No 65
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-41 Score=375.92 Aligned_cols=223 Identities=31% Similarity=0.436 Sum_probs=197.3
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 225 (1136)
...+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|.++....+ +|.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 467999999999999999999999999999999999999887 9999999999988765 588999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.|+.+.+.... + .+.+.+++++|+.++|++.++..+ .
T Consensus 94 V~~NVafGLk~~~~~~-------------------~--------------~~i~~rv~e~L~lV~L~~~~~R~p-----~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK-------------------K--------------AEIKARVEEALELVGLEGFADRKP-----H 135 (352)
T ss_pred HHHHhhhhhhhcCCCC-------------------H--------------HHHHHHHHHHHHHcCchhhhhhCh-----h
Confidence 9999999987432111 0 112346999999999999877654 5
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||+|||+|||||+.+|++||||||.|+||..-+.++...|+++.+.. +.+.|.++|+..|+..++|+|++|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 699999999999999999999999999999999999999999999998877 5556668999999999999999999999
Q ss_pred EEEecChhhHHHHHHhcCCCCCCCCChHHHHHhh
Q 001154 386 IVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV 419 (1136)
Q Consensus 386 iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v 419 (1136)
|...|+++++ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4578888888988754
No 66
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=352.68 Aligned_cols=207 Identities=28% Similarity=0.421 Sum_probs=176.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEecc---CCCCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQ---DWQVAEMT 225 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~---d~~~~~lT 225 (1136)
++|+|||+.+++|++++|+||||||||||+|+|.|++.|. +|+|.++|.+......+..+|||||. |+-|| +|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 4999999999999999999999999999999999999887 99999999988776666789999995 56566 79
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+|.+..+..-+. ..+. ....+....++++|+.+||.+.+|..+|+
T Consensus 94 V~d~V~~g~~~~~--g~~~----------------------------~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK--GWFR----------------------------RLNKKDKEKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc--cccc----------------------------cccHHHHHHHHHHHHHcCchhhhCCcccc----
Confidence 9999987632110 0000 00111234699999999999999988875
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
|||||+|||-|||||+.+|++|+|||||+|+|+.++..|++.|+++.++ +.+|++++|+...+.++||+|+.|+ ++
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln-~~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLN-RH 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEc-Ce
Confidence 9999999999999999999999999999999999999999999999875 5666679999999999999999995 57
Q ss_pred EEEecChhhHHH
Q 001154 386 IVYQGPRVSVLD 397 (1136)
Q Consensus 386 iv~~G~~~~~~~ 397 (1136)
+++.|+++++.+
T Consensus 216 ~~~~G~~~~~~~ 227 (254)
T COG1121 216 LIASGPPEEVLT 227 (254)
T ss_pred eEeccChhhccC
Confidence 899999988753
No 67
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.4e-40 Score=341.04 Aligned_cols=210 Identities=24% Similarity=0.345 Sum_probs=179.6
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC------CceEEEEeccCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQ 220 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~ 220 (1136)
.+.|++|||++|++||+++|+|||||||||||+.|.|++.|+ +|+|.+.|.++..... ++.+|+++|+-.+
T Consensus 20 ~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gAL 96 (263)
T COG1127 20 DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGAL 96 (263)
T ss_pred CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeecccc
Confidence 457999999999999999999999999999999999999987 9999999998865532 4679999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
|..+||+||+.|..+-... .|+.. .+..+..-|+..||... ++
T Consensus 97 FssltV~eNVafplre~~~-------------------lp~~~--------------i~~lv~~KL~~VGL~~~----~~ 139 (263)
T COG1127 97 FSSLTVFENVAFPLREHTK-------------------LPESL--------------IRELVLMKLELVGLRGA----AA 139 (263)
T ss_pred ccccchhHhhheehHhhcc-------------------CCHHH--------------HHHHHHHHHHhcCCChh----hh
Confidence 9999999999997553211 11111 12235556788999865 22
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+.+...||||++||+++|||++.+|+++|+||||+||||.++..+.++++++.+.++. |+++++|+.++++..+|+|++
T Consensus 140 ~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~-T~i~VTHDl~s~~~i~Drv~~ 218 (263)
T COG1127 140 DLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGL-TVIMVTHDLDSLLTIADRVAV 218 (263)
T ss_pred hhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCC-EEEEEECChHHHHhhhceEEE
Confidence 3566679999999999999999999999999999999999999999999999888754 455588999999999999999
Q ss_pred EcCCeEEEecChhhHHH
Q 001154 381 LSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~~ 397 (1136)
|.+|+|+..|+++++.+
T Consensus 219 L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 219 LADGKVIAEGTPEELLA 235 (263)
T ss_pred EeCCEEEEeCCHHHHHh
Confidence 99999999999999864
No 68
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-41 Score=374.51 Aligned_cols=214 Identities=26% Similarity=0.379 Sum_probs=190.0
Q ss_pred ccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccC
Q 001154 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQN 910 (1136)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~ 910 (1136)
+++.++.+++..+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++.. ...+|.+|+|+|+
T Consensus 8 i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~ 85 (352)
T COG3842 8 IRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDITDVPPEKRPIGMVFQS 85 (352)
T ss_pred EEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhhcccceeecC
Confidence 3444556678899999999999999999999999999999999999987 569999999998765 3457889999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
..+||+|||.||+.|+..++. ....++.++++++++++++|.+++++.. .+|||||||||+|||||+.+|++|
T Consensus 86 YALFPHltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQqQRVALARAL~~~P~vL 158 (352)
T COG3842 86 YALFPHMTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQQRVALARALVPEPKVL 158 (352)
T ss_pred cccCCCCcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHHHHHHHHHHhhcCcchh
Confidence 999999999999999976442 2345667789999999999999888754 589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
+||||.|+||..-+..+...++++.+ .|.|.|++|||.. +.+.++|||.+|+ .|+++..|++.+
T Consensus 159 LLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~-~G~I~Q~gtP~e 223 (352)
T COG3842 159 LLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMN-DGRIEQVGTPEE 223 (352)
T ss_pred hhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEcc-CCceeecCCHHH
Confidence 99999999999999999999999975 4999999999976 7889999999998 589999998743
No 69
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-41 Score=338.02 Aligned_cols=207 Identities=26% Similarity=0.347 Sum_probs=179.0
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCC---CCceeEEEEEEcCccCCh-----hcccceEEEeccC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQN 910 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~ 910 (1136)
|+.+++|+|||+.|++++++||+|||||||||||++|.++. ++-..+|+|.++|+++.. ..+|+.+|.|+|.
T Consensus 17 Yg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQk 96 (253)
T COG1117 17 YGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQK 96 (253)
T ss_pred ECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccC
Confidence 46789999999999999999999999999999999999853 344678999999987633 3578999999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 001154 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1136)
|.-|| +|++||+.|+.++....+ ++.++.|++.|+...|.+- +|.+... ..+|||||+|||||||||+.+|+|
T Consensus 97 PnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a~~LSGGQQQRLcIARalAv~PeV 170 (253)
T COG1117 97 PNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--ALGLSGGQQQRLCIARALAVKPEV 170 (253)
T ss_pred CCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--ccCCChhHHHHHHHHHHHhcCCcE
Confidence 99999 899999999988775433 6677889999998888653 4444322 347999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+||||||+|||.+...|.++|.+|+ +.-|||++||.+. ...+..|+..++.. |+++++|+.
T Consensus 171 lLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~LvE~g~T 232 (253)
T COG1117 171 LLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GELVEFGPT 232 (253)
T ss_pred EEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cEEEEEcCH
Confidence 99999999999999999999999997 5799999999986 57788999999985 799999986
No 70
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.2e-40 Score=356.92 Aligned_cols=211 Identities=33% Similarity=0.465 Sum_probs=181.1
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 223 (1136)
++.||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .+.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 357999999999999999999999999999999999999886 9999999999877653 4789999999888889
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+|.+.++..-.. + . ......+....++..|+.+|+.+.++..+.
T Consensus 91 ~tV~d~V~~GR~p~~-~-~----------------------------~~~~~~~D~~~v~~aL~~~~~~~la~r~~~--- 137 (258)
T COG1120 91 LTVYELVLLGRYPHL-G-L----------------------------FGRPSKEDEEIVEEALELLGLEHLADRPVD--- 137 (258)
T ss_pred cEEeehHhhcCCccc-c-c----------------------------ccCCCHhHHHHHHHHHHHhCcHHHhcCccc---
Confidence 999999988633110 0 0 000011112358899999999999988765
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
.|||||||||.|||||+.+|++|+||||||+||...+.++++.+++++++. +.++|+++|+.+.+..+||++++|.+
T Consensus 138 --~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk~ 214 (258)
T COG1120 138 --ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLKD 214 (258)
T ss_pred --ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 599999999999999999999999999999999999999999999999764 45566688999999999999999999
Q ss_pred CeEEEecChhhHH
Q 001154 384 GQIVYQGPRVSVL 396 (1136)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1136)
|+++++|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999988775
No 71
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-40 Score=331.76 Aligned_cols=207 Identities=28% Similarity=0.341 Sum_probs=184.0
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC--CCceEEEEeccCCCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 224 (1136)
..++++||||.++.|++++|+|||||||||+|++|++++.|+ +|+|+++|.+..... .++.+|.++.+..++..|
T Consensus 14 ~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~Rl 90 (245)
T COG4555 14 KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARL 90 (245)
T ss_pred HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhh
Confidence 345899999999999999999999999999999999999987 999999999875443 368899999888889999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
|++|||.|.+++.+.. ..+.+.+++++.+.|+|..|.|+.+|+
T Consensus 91 T~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~~--- 133 (245)
T COG4555 91 TARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVGE--- 133 (245)
T ss_pred hHHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHhh---
Confidence 9999999988775432 122345689999999999999999984
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
+|-|+||||+|||||+.+|++++|||||||||..++..+.+.++++... +.+|+..+|..+|+..+||+|++|++|
T Consensus 134 --~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~e--gr~viFSSH~m~EvealCDrvivlh~G 209 (245)
T COG4555 134 --FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNE--GRAVIFSSHIMQEVEALCDRVIVLHKG 209 (245)
T ss_pred --hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcC--CcEEEEecccHHHHHHhhheEEEEecC
Confidence 9999999999999999999999999999999999999999999988643 566777889999999999999999999
Q ss_pred eEEEecChhhHHH
Q 001154 385 QIVYQGPRVSVLD 397 (1136)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1136)
++++.|+.+.+..
T Consensus 210 evv~~gs~~~l~~ 222 (245)
T COG4555 210 EVVLEGSIEALDA 222 (245)
T ss_pred cEEEcCCHHHHHH
Confidence 9999999987754
No 72
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-40 Score=344.52 Aligned_cols=192 Identities=24% Similarity=0.356 Sum_probs=170.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1136)
..+|+|+|++|.+||+++|+|||||||||||++|+|+..|+ +|+|.++|.++ ..+...++||+|++.++|=+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHH
Confidence 57999999999999999999999999999999999999887 99999999887 34667899999999999999999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 001154 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1136)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~L 307 (1136)
||+.|+....+... .+...+++.+|+.+||.+..|.. ...|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~~~-----P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFEDKY-----PHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhhcC-----cccc
Confidence 99999887664211 01123588999999999988754 4679
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 308 SGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+.. +.||+.++|+.+|+..++|||++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999999999999999999988765 466667899999999999999999983
No 73
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.9e-39 Score=367.22 Aligned_cols=204 Identities=28% Similarity=0.394 Sum_probs=178.2
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~ 916 (1136)
+++..+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+|||+|++.+++.
T Consensus 17 ~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~ 94 (306)
T PRK13537 17 YGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPD 94 (306)
T ss_pred ECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEecccchHHHHhcEEEEeccCcCCCC
Confidence 455789999999999999999999999999999999999876 468999999998643 2356789999999999999
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
+|++||+.|.+.++. ....+..+.++++++.+++.+..+..+ ++||+|||||++||+||+.+|++|||||||
T Consensus 95 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~aL~~~P~lllLDEPt 166 (306)
T PRK13537 95 FTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGMKRRLTLARALVNDPDVLVLDEPT 166 (306)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 999999998765542 223334456789999999988777654 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 167 ~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 222 (306)
T PRK13537 167 TGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGAP 222 (306)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999877999999999986 57788999999985 799999985
No 74
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.8e-40 Score=324.75 Aligned_cols=199 Identities=27% Similarity=0.363 Sum_probs=174.1
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1136)
.++|+||||.|++||++-|+|||||||||||++|.+... +..|+|.++|+++.. ...+|.||+|+|+.-+.+
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~ 92 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP 92 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecccccccccchhhheeeeEeeeccccc
Confidence 569999999999999999999999999999999999776 568999999998643 235789999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
..||+||+.|...... .+..+.++++.++++.+||.+.++.. +.+||||||||++||||++.+|++|+.|||
T Consensus 93 ~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LSGGEQQRvaIARAiV~~P~vLlADEP 164 (223)
T COG2884 93 DRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLSGGEQQRVAIARAIVNQPAVLLADEP 164 (223)
T ss_pred cchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccCchHHHHHHHHHHHccCCCeEeecCC
Confidence 9999999999876653 34566778899999999998887765 258999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCEEEEEecCcEEEEeCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGP 1053 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~-~d~~~~l~~gG~~~~~g~ 1053 (1136)
|.+|||..+..||+++.++...|.|||+.|||.+ +... -.+++.|. .|+++....
T Consensus 165 TGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~--lv~~~~~rvl~l~-~Grl~~d~~ 220 (223)
T COG2884 165 TGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLE--LVNRMRHRVLALE-DGRLVRDES 220 (223)
T ss_pred CCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHH--HHHhccCcEEEEe-CCEEEeccc
Confidence 9999999999999999999889999999999954 4444 46778887 578887654
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-40 Score=331.47 Aligned_cols=221 Identities=25% Similarity=0.376 Sum_probs=181.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC--CCcceeeEEEECCccCCCCC-----CCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1136)
+.+|+|||+.|+++++||++|||||||||||++|....+ +..+++|+|.|+|+++.+.. .++.+|+|+|.|..
T Consensus 20 ~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnP 99 (253)
T COG1117 20 KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNP 99 (253)
T ss_pred hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCC
Confidence 469999999999999999999999999999999987643 35678999999999876542 36899999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLV 299 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~v 299 (1136)
|| +|++||+.|+.+.+|... +.+ +.+++..|+.-+|- ...|.+
T Consensus 100 Fp-~SIydNVayG~r~~g~~~--~~l--------------------------------deiVe~sLk~AaLWdEVKDrL- 143 (253)
T COG1117 100 FP-MSIYDNVAYGLRLHGIKD--KEL--------------------------------DEIVESSLKKAALWDEVKDRL- 143 (253)
T ss_pred CC-chHHHHHHHhHHhhccch--HHH--------------------------------HHHHHHHHHHhHhHHHhHHHh-
Confidence 99 999999999998876543 111 12344455555552 223332
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
++...+|||||+||++|||||+-+|+|||||||||+|||.++..|-+++.++.+ .-||++++|.+..+.+..|+..
T Consensus 144 -~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~ta 219 (253)
T COG1117 144 -HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTA 219 (253)
T ss_pred -hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhh
Confidence 123457999999999999999999999999999999999999999999999874 4566668999999999999999
Q ss_pred EEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHH
Q 001154 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 416 (1136)
.+..|+++++|+.+++ |.-|.++.+.||+
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999887 4457766666665
No 76
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-39 Score=333.04 Aligned_cols=216 Identities=25% Similarity=0.340 Sum_probs=181.0
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQ 220 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~ 220 (1136)
++++|+|||+.|++||+++|+|||||||||||++|.|+.+++ +|+|.+||.++.... .++.+||++|+..+
T Consensus 16 ~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 16 GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 457999999999999999999999999999999999988876 999999998776543 24689999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
.+.+||.+|+..+..-+ .+.+ ....+..+. +.+..+-+.|+.+|+.+.+-+..+
T Consensus 93 v~r~sv~~NVl~grl~~--~s~~---------~slfglfsk---------------~dk~~Al~aLervgi~~~A~qra~ 146 (258)
T COG3638 93 VPRLSVLENVLLGRLGY--TSTW---------RSLFGLFSK---------------EDKAQALDALERVGILDKAYQRAS 146 (258)
T ss_pred ccccHHHHHHHhhhccc--chHH---------HHHhCCCCH---------------HHHHHHHHHHHHcCcHHHHHHHhc
Confidence 99999999998864321 1111 111222222 223456778999999998887765
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
.|||||+|||+|||||+.+|++++-|||++.||+.++.++++.|++++...|.|+ ++.+|..+-+.++||||+-
T Consensus 147 -----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tv-i~nLH~vdlA~~Y~~Riig 220 (258)
T COG3638 147 -----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITV-IVNLHQVDLAKKYADRIIG 220 (258)
T ss_pred -----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEE-EEEechHHHHHHHHhhheE
Confidence 5999999999999999999999999999999999999999999999998755554 4566888999999999999
Q ss_pred EcCCeEEEecChhhHHH
Q 001154 381 LSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~~ 397 (1136)
|.+|+|+|.||++++.+
T Consensus 221 l~~G~ivfDg~~~el~~ 237 (258)
T COG3638 221 LKAGRIVFDGPASELTD 237 (258)
T ss_pred ecCCcEEEeCChhhhhH
Confidence 99999999999988654
No 77
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.7e-40 Score=327.34 Aligned_cols=214 Identities=21% Similarity=0.319 Sum_probs=187.9
Q ss_pred ccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEe
Q 001154 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYC 907 (1136)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv 907 (1136)
.++..+.+++++++++||+.|++||++||+|||||||||.+.++.|... +.+|.|.+||.+++.. ..+.-+||+
T Consensus 7 a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYL 84 (243)
T COG1137 7 AENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYL 84 (243)
T ss_pred ehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccc
Confidence 3455667889999999999999999999999999999999999999877 5689999999987643 233468999
Q ss_pred ccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 001154 908 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1136)
Q Consensus 908 ~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1136)
||++..|-.+||+||++.....+.. +....+++..++++++.+++.++++... ..||||||+|+.|||||+.+|
T Consensus 85 pQE~SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P 158 (243)
T COG1137 85 PQEASIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANP 158 (243)
T ss_pred cccchHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCC
Confidence 9999999999999999876655532 2233456667889999999999998753 379999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+.++||||++|+||-+...|+++++.|+++|..|++|-|... +....|||.+++.+ |++...|.+.
T Consensus 159 ~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 159 KFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred CEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 999999999999999999999999999999999999999987 78999999999985 7999999864
No 78
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.3e-39 Score=364.65 Aligned_cols=202 Identities=26% Similarity=0.323 Sum_probs=176.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh------cccceEEEeccCCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSP 915 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~ 915 (1136)
..+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+..+++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~ 95 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccc
Confidence 579999999999999999999999999999999999877 4689999999876431 23668999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
..||+||+.|...... .+..+.++++.++++.++|.+..+... .+|||||||||+|||||+.+|++|+||||
T Consensus 96 ~~tv~eni~~~~~~~~---~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LSgGqkQRV~IARAL~~~P~iLLlDEP 167 (343)
T TIGR02314 96 SRTVFGNVALPLELDN---TPKDEIKRKVTELLALVGLGDKHDSYP-----SNLSGGQKQRVAIARALASNPKVLLCDEA 167 (343)
T ss_pred cCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 9999999998754331 234455667889999999988877653 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|+ +|+++..|+..
T Consensus 168 ts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~-~G~iv~~g~~~ 226 (343)
T TIGR02314 168 TSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVIS-NGELIEQGTVS 226 (343)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999999765 999999999976 4668899999998 58999998853
No 79
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-38 Score=349.09 Aligned_cols=204 Identities=26% Similarity=0.373 Sum_probs=173.1
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIH 913 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~ 913 (1136)
++..+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~ 88 (235)
T cd03261 11 GGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGAL 88 (235)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccChhhHHHHhcceEEEccCccc
Confidence 44679999999999999999999999999999999999876 468999999987542 2345679999999999
Q ss_pred CCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 914 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
++.+||+||+.+...... .....+..+.+.++++.+++.+..+..+ ..|||||||||+|||||+.+|+|||||
T Consensus 89 ~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllD 161 (235)
T cd03261 89 FDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYD 161 (235)
T ss_pred CCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEec
Confidence 999999999988643221 1223344556788999999987666543 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+|||+.++..+++.|+++++ .|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 162 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 162 EPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 99999999999999999999976 4899999999986 46778999999985 789988874
No 80
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-39 Score=367.46 Aligned_cols=204 Identities=25% Similarity=0.360 Sum_probs=178.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+++.+|+|+||++++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|++|
T Consensus 15 ~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~t 92 (356)
T PRK11650 15 GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMS 92 (356)
T ss_pred CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCC
Confidence 34679999999999999999999999999999999999877 568999999987643 223578999999999999999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
|+||+.|....+. ....+..+.++++++.++|.++.+... .+|||||||||+|||||+.+|+||+||||||+
T Consensus 93 v~eNi~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvalARAL~~~P~llLLDEP~s~ 164 (356)
T PRK11650 93 VRENMAYGLKIRG---MPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQRVAMGRAIVREPAVFLFDEPLSN 164 (356)
T ss_pred HHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999999764331 234445567899999999988877654 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||+.++..+.+.|+++.++ |.|+|++|||+. ++...+|++++|+ +|+++..|+..
T Consensus 165 LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~-~G~i~~~g~~~ 220 (356)
T PRK11650 165 LDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMN-GGVAEQIGTPV 220 (356)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEECCHH
Confidence 9999999999999998765 999999999986 6888999999997 58999999864
No 81
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.3e-38 Score=363.94 Aligned_cols=209 Identities=25% Similarity=0.343 Sum_probs=179.6
Q ss_pred ccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCC
Q 001154 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQND 911 (1136)
Q Consensus 834 ~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~ 911 (1136)
+.++.++++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++
T Consensus 46 nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~~~~~~~~~~~~ig~v~q~~ 123 (340)
T PRK13536 46 GVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVPVPARARLARARIGVVPQFD 123 (340)
T ss_pred EEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEECCcchHHHhccEEEEeCCc
Confidence 33344466789999999999999999999999999999999999877 468999999987643 23567899999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++.+|++|++.|.+.++. ....+..+.++++++.++|.+..+..+ .+||+|||||++||+||+.+|++||
T Consensus 124 ~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~kqrv~lA~aL~~~P~lLi 195 (340)
T PRK13536 124 NLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGMKRRLTLARALINDPQLLI 195 (340)
T ss_pred cCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999987654432 222334456778999999988777665 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 196 LDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 256 (340)
T PRK13536 196 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGRP 256 (340)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 99999999999999999999999878999999999986 57788999999985 799999985
No 82
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.9e-39 Score=335.96 Aligned_cols=196 Identities=26% Similarity=0.418 Sum_probs=166.8
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-------CceEEEEeccCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1136)
..++|+++|+.|++||+++|+|||||||||||++|+|+..|+ +|.|.++|.++..... ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 378999999999999999999999999999999999998886 9999999988775532 357999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccc-cc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD-TL 298 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~d-t~ 298 (1136)
++|.+||+||+..++...+.... .....++.+++.+||.+..+ ..
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~ 139 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKK 139 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCC
Confidence 99999999999987665543211 01234788899999987655 43
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+ ..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++.. +++|++++|+. ++...|||+
T Consensus 140 p-----~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~-g~tii~VTHd~-~lA~~~dr~ 212 (226)
T COG1136 140 P-----SELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKER-GKTIIMVTHDP-ELAKYADRV 212 (226)
T ss_pred c-----hhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhc-CCEEEEEcCCH-HHHHhCCEE
Confidence 4 4699999999999999999999999999999999999999999999998764 45555566664 677899999
Q ss_pred EEEcCCeE
Q 001154 379 ILLSEGQI 386 (1136)
Q Consensus 379 ilL~~G~i 386 (1136)
+.|.+|++
T Consensus 213 i~l~dG~~ 220 (226)
T COG1136 213 IELKDGKI 220 (226)
T ss_pred EEEeCCee
Confidence 99999994
No 83
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.2e-38 Score=365.95 Aligned_cols=205 Identities=26% Similarity=0.383 Sum_probs=179.7
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCCCCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~l 917 (1136)
+++..+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+|||+|+..++|++
T Consensus 14 ~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~ 91 (353)
T TIGR03265 14 FGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNL 91 (353)
T ss_pred eCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCC
Confidence 345679999999999999999999999999999999999877 568999999987643 22457799999999999999
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
||+||+.|+...+ ..+..+.++.++++++.++|.++.+... .+|||||||||+|||||+.+|++|+||||||
T Consensus 92 tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~QRvaLARaL~~~P~llLLDEP~s 163 (353)
T TIGR03265 92 TVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQQRVALARALATSPGLLLLDEPLS 163 (353)
T ss_pred cHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999999986543 2334455678899999999998887653 5899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|+..
T Consensus 164 ~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~~~ 220 (353)
T TIGR03265 164 ALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGTPQ 220 (353)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 99999999999999998764 999999999986 67889999999985 7999999863
No 84
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.9e-38 Score=360.19 Aligned_cols=206 Identities=22% Similarity=0.335 Sum_probs=177.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC------CceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1136)
+++|+|||++|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 56999999999999999999999999999999999999876 9999999998865432 46799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||+||+.|+....+... .+...++.++++.+||.+..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998654332110 001234788999999998877655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..|||||||||+|||||+.+|++|+|||||||||+.++..+++.|+++.+..+ .+|+.++|..+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999976544 55666889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988773
No 85
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=364.52 Aligned_cols=204 Identities=25% Similarity=0.400 Sum_probs=179.2
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh-cccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lt 918 (1136)
++..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... ..+|.+|||+|+..++|++|
T Consensus 17 ~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~t 94 (351)
T PRK11432 17 GSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMS 94 (351)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCC
Confidence 45679999999999999999999999999999999999887 5689999999876532 23578999999999999999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
|+||+.|+...+. ....+.++.++++++.+++.++.+... ..|||||||||+|||||+.+|++|+|||||||
T Consensus 95 v~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~ 166 (351)
T PRK11432 95 LGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQQRVALARALILKPKVLLFDEPLSN 166 (351)
T ss_pred HHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCccc
Confidence 9999999865442 234555678899999999988877653 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||+.++..+.+.|+++.++ |.|+|++|||++ ++.+.+|++++|++ |+++..|+..
T Consensus 167 LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~~~ 222 (351)
T PRK11432 167 LDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGSPQ 222 (351)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999764 999999999986 67888999999985 7999999863
No 86
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.6e-38 Score=360.07 Aligned_cols=203 Identities=27% Similarity=0.382 Sum_probs=176.5
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1136)
+++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++.+++.+
T Consensus 4 ~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 81 (302)
T TIGR01188 4 GDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDL 81 (302)
T ss_pred CCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCC
Confidence 45679999999999999999999999999999999999876 468999999987643 23456799999999999999
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
||+||+.+.+.++. ......++.++++++.+++.+..+..+ ..|||||||||+||+||+.+|++|||||||+
T Consensus 82 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 82 TGRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99999998765442 223334556889999999987777654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999877999999999986 57778999999984 799999875
No 87
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.3e-38 Score=364.08 Aligned_cols=204 Identities=27% Similarity=0.343 Sum_probs=178.3
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeE--EEEEEcCccCCh-hcccceEEEeccCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIE--GDIYISGYPKRQ-ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~ 916 (1136)
++..+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.++.. ...++.+|||+|++.++|.
T Consensus 16 ~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~ 93 (362)
T TIGR03258 16 GANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPH 93 (362)
T ss_pred CCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCEECCCCCHHHCCEEEEECCcccCCC
Confidence 45679999999999999999999999999999999999877 457 999999987643 2245679999999999999
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
+||+||+.|....+ .....+.++.++++++.++|.+..+... .+|||||||||+|||||+.+|++|+|||||
T Consensus 94 ~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvaLARAL~~~P~llLLDEP~ 165 (362)
T TIGR03258 94 LKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGGMQQRIAIARAIAIEPDVLLLDEPL 165 (362)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 99999999986543 2334455667899999999998887654 489999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNT--GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~--g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+|||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|+ +|+++..|+..
T Consensus 166 s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~-~G~i~~~g~~~ 224 (362)
T TIGR03258 166 SALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMK-DGRLAAHGEPQ 224 (362)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 999999999999999999875 899999999986 5788899999998 47999999863
No 88
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-39 Score=331.87 Aligned_cols=200 Identities=27% Similarity=0.373 Sum_probs=168.6
Q ss_pred EEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCCC--CCCC
Q 001154 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDI--HSPG 916 (1136)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~--~~~~ 916 (1136)
.+|+||||+|.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.... .+.+.+.+|+|++. +.|.
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~ 98 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPR 98 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCcccCccccchhhccceeEEecCCccccCcc
Confidence 49999999999999999999999999999999999887 4689999999875432 46788999999974 5688
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.||.+.|.=.... ...+..+ +++.++++.+||.+- .++. +.+||||||||+||||||+.+|++|+||||
T Consensus 99 ~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~eLSGGQ~QRiaIARAL~~~PklLIlDEp 168 (252)
T COG1124 99 RTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHELSGGQRQRIAIARALIPEPKLLILDEP 168 (252)
T ss_pred hhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chhcChhHHHHHHHHHHhccCCCEEEecCc
Confidence 9999988654332 1222222 338899999999653 3322 368999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
||+||+..++.|++++.++.+ .+.|.|++|||.+. +...|||++||++ |+++..++.+.
T Consensus 169 tSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ivE~~~~~~ 228 (252)
T COG1124 169 TSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQIVEIGPTEE 228 (252)
T ss_pred hhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-CeEEEeechhh
Confidence 999999999999999999976 48899999999874 7778999999985 79999998643
No 89
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-38 Score=340.62 Aligned_cols=201 Identities=30% Similarity=0.428 Sum_probs=169.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh-cccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 11 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t 88 (213)
T cd03259 11 GSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLT 88 (213)
T ss_pred CCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCc
Confidence 44679999999999999999999999999999999999876 4689999999876431 23457999999998888999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
++||+.+...... ......++.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+|
T Consensus 89 v~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~ 160 (213)
T cd03259 89 VAENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSA 160 (213)
T ss_pred HHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999987643321 122334456788999999987666543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 999 LDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
||+.++..+++.|+++++ .|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 161 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 161 LDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999876 4999999999976 46788999999985 6887654
No 90
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.8e-38 Score=361.85 Aligned_cols=208 Identities=27% Similarity=0.387 Sum_probs=178.3
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCCCCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~l 917 (1136)
+++..+|+|+||+|++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|.+
T Consensus 12 ~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~ 89 (353)
T PRK10851 12 FGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHM 89 (353)
T ss_pred eCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHCCEEEEecCcccCCCC
Confidence 345679999999999999999999999999999999999876 468999999987643 22346799999999999999
Q ss_pred cHHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 918 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
||+||+.|....+.. ......+.++.++++++.++|.+..+... .+|||||||||+|||||+.+|++|+|||||
T Consensus 90 tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~QRvalArAL~~~P~llLLDEP~ 164 (353)
T PRK10851 90 TVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQKQRVALARALAVEPQILLLDEPF 164 (353)
T ss_pred cHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999987543211 11233445667899999999988777653 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |++++.|+..
T Consensus 165 s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~~~ 222 (353)
T PRK10851 165 GALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGTPD 222 (353)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 999999999999999999765 899999999986 57888999999984 7999998753
No 91
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.5e-38 Score=360.40 Aligned_cols=205 Identities=23% Similarity=0.310 Sum_probs=178.2
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcc----cceEEEeccCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETF----ARISGYCEQND 911 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~----~~~~gyv~Q~~ 911 (1136)
++++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+ ++.+|||+|++
T Consensus 3 ~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 3 TGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred cCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 356779999999999999999999999999999999999887 568999999988653 222 56899999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.++|.+||+||+.|...+. .....+..+.+.++++.++|.+..+... ..|||||||||+|||||+.+|+|||
T Consensus 81 ~l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLL 152 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILL 152 (363)
T ss_pred cCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999876543 2334455677899999999987776653 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|||||++||+.++..+++.++++.++ |+|||++||+++ ++...+|++++|+ +|+++..|+..
T Consensus 153 lDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~-~G~iv~~g~~~ 215 (363)
T TIGR01186 153 MDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMK-AGEIVQVGTPD 215 (363)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEeeCCHH
Confidence 99999999999999999999999754 999999999976 5778899999997 57999998753
No 92
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-38 Score=362.55 Aligned_cols=206 Identities=27% Similarity=0.366 Sum_probs=178.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1136)
+.+|+|+|+++++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 35999999999999999999999999999999999998876 9999999998865433 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.|+.+..+... .+...+++++++.+||++..+..+ +.
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMPK----------------------------------AEIEERVAEAARILELEPLLDRKP-----RE 134 (356)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hh
Confidence 999999765322100 011234788999999998877655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+|||||+.+|++|+||||||+||+.++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999987644 45666688999999999999999999999
Q ss_pred EEecChhhHH
Q 001154 387 VYQGPRVSVL 396 (1136)
Q Consensus 387 v~~G~~~~~~ 396 (1136)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999998874
No 93
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.3e-38 Score=356.73 Aligned_cols=204 Identities=26% Similarity=0.364 Sum_probs=174.4
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~ 916 (1136)
+++..+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++.+++.
T Consensus 14 ~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (303)
T TIGR01288 14 YGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPVPSRARLARVAIGVVPQFDNLDPE 91 (303)
T ss_pred eCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcccHHHHhhcEEEEeccccCCcC
Confidence 345679999999999999999999999999999999999876 468999999987532 2346679999999999999
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
+|++||+.+.+..+. .......+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++|||||||
T Consensus 92 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt 163 (303)
T TIGR01288 92 FTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGMKRRLTLARALINDPQLLILDEPT 163 (303)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 999999987544321 222333456778899999987766654 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|+ +|++++.|+.
T Consensus 164 ~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 219 (303)
T TIGR01288 164 TGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLE-SGRKIAEGRP 219 (303)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 999999999999999999878999999999986 5777899999998 4799999875
No 94
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-38 Score=339.69 Aligned_cols=200 Identities=28% Similarity=0.427 Sum_probs=171.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHH
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e 921 (1136)
+.+|+|+||+|++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.. .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 579999999999999999999999999999999999876 468999999987642 3567999999998888899999
Q ss_pred HHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 001154 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1136)
Q Consensus 922 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~ 1001 (1136)
|+.+....+. .......+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|||||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988654332 222334456788999999987666543 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEec-CcEEEEeCCC
Q 001154 1002 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 1054 (1136)
Q Consensus 1002 ~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~-gG~~~~~g~~ 1054 (1136)
.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ +|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 46778999999985 4899887764
No 95
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-38 Score=328.68 Aligned_cols=216 Identities=28% Similarity=0.387 Sum_probs=186.7
Q ss_pred ccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEe
Q 001154 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYC 907 (1136)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv 907 (1136)
.++.++.+++..+++||||++++||++||+||||||||||+|+|+|..+ +.+|+|.++|.++... ..+..++..
T Consensus 7 v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RT 84 (250)
T COG0411 7 VRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIART 84 (250)
T ss_pred eccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceee
Confidence 4555667789999999999999999999999999999999999999877 5689999999987542 234568889
Q ss_pred ccCCCCCCCCcHHHHHHHHhhhc--------CCCc-ccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHH
Q 001154 908 EQNDIHSPGLTVLESLLFSAWLR--------LPSE-IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLT 978 (1136)
Q Consensus 908 ~Q~~~~~~~ltv~e~l~~~~~lr--------~~~~-~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ 978 (1136)
+|...+|+++||.||++.++..+ .+.. ....+..+...++++.++|.+.++...+ +||+||||||.
T Consensus 85 FQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LE 159 (250)
T COG0411 85 FQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLE 159 (250)
T ss_pred cccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHH
Confidence 99999999999999998875432 1111 1234556778899999999999998764 79999999999
Q ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 979 IAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 979 ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
|||||+.+|++|+||||.+||.+.....+.+.|+++.+ .|.||++|-||++. ++..|||++||.. |+++..|++.+
T Consensus 160 IArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~e 236 (250)
T COG0411 160 IARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPEE 236 (250)
T ss_pred HHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHHH
Confidence 99999999999999999999999999999999999987 47999999999985 8899999999984 89999998743
No 96
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-38 Score=360.26 Aligned_cols=206 Identities=25% Similarity=0.373 Sum_probs=179.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1136)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+++ +|+|.++|.++....+ +|.++||+|+..+||++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999876 9999999998865544 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.|+.+.++... .+...+++++++.+||.+..+..+ +.
T Consensus 96 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~~-----~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRYV-----DQ 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999999865432110 011235788999999988776554 56
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987654 45566688999999999999999999999
Q ss_pred EEecChhhHH
Q 001154 387 VYQGPRVSVL 396 (1136)
Q Consensus 387 v~~G~~~~~~ 396 (1136)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999998873
No 97
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=5.3e-36 Score=394.65 Aligned_cols=201 Identities=26% Similarity=0.375 Sum_probs=175.9
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCCc
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
++.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|+++.. ...++.+|||+|++.+++.+|
T Consensus 942 ~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LT 1019 (2272)
T TIGR01257 942 GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLT 1019 (2272)
T ss_pred CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCC
Confidence 4679999999999999999999999999999999999876 468999999988643 234677999999999999999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
|+|++.|.+.++. ....+.++.++++++.++|.+..+..+ ++|||||||||+||+||+.+|+||||||||+|
T Consensus 1020 V~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGGqKQRLsLArALi~~PkVLLLDEPTSG 1091 (2272)
T TIGR01257 1020 VAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSG 1091 (2272)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcC
Confidence 9999999876553 222344566889999999988777654 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||+.+++.+++.|++++ +|+|||++||+++ ++...+|++++|++ |++++.|+.
T Consensus 1092 LDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~Gs~ 1144 (2272)
T TIGR01257 1092 VDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSGTP 1144 (2272)
T ss_pred CCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999985 6999999999976 56678999999985 799998874
No 98
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-38 Score=338.76 Aligned_cols=201 Identities=26% Similarity=0.376 Sum_probs=177.9
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCC----hhcccceEEEeccCCCC-CCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR----QETFARISGYCEQNDIH-SPG 916 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~~~~-~~~ 916 (1136)
..+|+|+|++|++||.++|+|+||||||||+++|+|... +.+|.|.++|.+.. ...+++.+|||+|++.. +..
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~ 94 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFG 94 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeeccchhhHHHhhcceEEEEECccccccc
Confidence 589999999999999999999999999999999999877 46899999998855 35678899999999754 356
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
-||.|.+.|+.... ..+.++.+++++++++.+++.++.++.. ..|||||||||+||.+|+.+|++|+|||||
T Consensus 95 ~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----~~LSGGqkqRvaIA~vLa~~P~iliLDEPt 166 (235)
T COG1122 95 PTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRPP-----FNLSGGQKQRVAIAGVLAMGPEILLLDEPT 166 (235)
T ss_pred CcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCCc-----cccCCcceeeHHhhHHHHcCCCEEEEcCCC
Confidence 79999999986533 3455567889999999999999877643 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||+.+++.+++.++++.++ |.|||++|||.+ .+.+.+|++++|++ |++++.|++
T Consensus 167 a~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~~g~p 223 (235)
T COG1122 167 AGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILADGDP 223 (235)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEeecCCH
Confidence 999999999999999999876 799999999987 47788999999985 799999974
No 99
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-38 Score=337.30 Aligned_cols=200 Identities=24% Similarity=0.441 Sum_probs=170.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcH
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..++.++|++|++.+++.+|+
T Consensus 11 ~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv 87 (210)
T cd03269 11 GRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKV 87 (210)
T ss_pred CCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcH
Confidence 44679999999999999999999999999999999999876 468999999987643 345679999999999999999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+||+.+....+. .......+.++++++.+++.+..+... .+||||||||++||++|+.+|++|+|||||+||
T Consensus 88 ~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~~lllDEP~~~L 159 (210)
T cd03269 88 IDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKVQFIAAVIHDPELLILDEPFSGL 159 (210)
T ss_pred HHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 999987654432 222334456788999999977665543 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
|+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 160 D~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 160 DPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 999999999999998777899999999976 46678999999985 7887654
No 100
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.2e-37 Score=352.66 Aligned_cols=206 Identities=29% Similarity=0.378 Sum_probs=178.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC--CCceEEEEeccCCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1136)
..+|+|||++|++|++++|+||||||||||+++|+|.+.|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999876 999999999875432 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.|.++..+... .+...+++.+++.+||.+.+++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999998655432110 0012246788999999988888765
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
+|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++. +++|+.++|..+++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~--g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLAR--GKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 59999999999999999999999999999999999999999999998642 5667778899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001154 386 IVYQGPRVSVLD 397 (1136)
Q Consensus 386 iv~~G~~~~~~~ 397 (1136)
+++.|+++++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999988754
No 101
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-38 Score=339.54 Aligned_cols=204 Identities=27% Similarity=0.364 Sum_probs=173.2
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~ 916 (1136)
++++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 10 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 87 (220)
T cd03265 10 YGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDE 87 (220)
T ss_pred ECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCcChHHHhhcEEEecCCcccccc
Confidence 345679999999999999999999999999999999999876 468999999986532 2345679999999999999
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
+|++|++.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++|+|||||
T Consensus 88 ~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEPt 159 (220)
T cd03265 88 LTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEPT 159 (220)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999988654332 222334456789999999987666543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||+.++..+.+.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 160 ~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 160 IGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999876 899999999986 56778999999984 789888764
No 102
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6e-38 Score=360.23 Aligned_cols=206 Identities=25% Similarity=0.404 Sum_probs=178.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1136)
+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.++||+|+..+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999998876 9999999998865433 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.|+.+.++... .+...+++++++.+||++..|..+ ..
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~L~~~~~~~~-----~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMGR----------------------------------AEVAERVAELLDLVGLPGSERKYP-----GQ 134 (353)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCCchhhCCh-----hh
Confidence 999999765322110 001235889999999998887654 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+|||||+.+|++||||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987654 45566688999999999999999999999
Q ss_pred EEecChhhHH
Q 001154 387 VYQGPRVSVL 396 (1136)
Q Consensus 387 v~~G~~~~~~ 396 (1136)
++.|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (353)
T TIGR03265 214 EQVGTPQEIY 223 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 103
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6.2e-38 Score=361.74 Aligned_cols=204 Identities=24% Similarity=0.349 Sum_probs=177.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
++..+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+|||+|++.++|.+|
T Consensus 25 ~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~lt 102 (375)
T PRK09452 25 DGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMT 102 (375)
T ss_pred CCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHCCEEEEecCcccCCCCC
Confidence 44679999999999999999999999999999999999877 468999999987643 223577999999999999999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
|+||+.|+...+. .+..+.++.++++++.+++.++.+... .+|||||||||+|||||+.+|++|||||||||
T Consensus 103 v~eNi~~~l~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~ 174 (375)
T PRK09452 103 VFENVAFGLRMQK---TPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQQRVAIARAVVNKPKVLLLDESLSA 174 (375)
T ss_pred HHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCc
Confidence 9999999754332 233444567889999999988877654 48999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||+.++..+.+.|+++.++ |.|+|++|||+. ++...+|++++|+ +|+++..|+..
T Consensus 175 LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~-~G~i~~~g~~~ 230 (375)
T PRK09452 175 LDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMR-DGRIEQDGTPR 230 (375)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999764 999999999986 6788899999998 58999998753
No 104
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6e-38 Score=360.65 Aligned_cols=207 Identities=25% Similarity=0.347 Sum_probs=179.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCccee--eEEEECCccCCCCCC-CceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVS--GKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 224 (1136)
..+|+|+|++|++|++++|+|||||||||||++|+|++.|+ + |+|.++|.++....+ ++.++||+|+..+++.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35999999999999999999999999999999999998876 7 999999998765433 46799999999999999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||+|||.|+.+..+... .+...+++++++.+||++..|+.+
T Consensus 95 tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~----- 135 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP----- 135 (362)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----
Confidence 99999999765432110 011234788999999998887665
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 136 ~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 136 AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999876543566777889999999999999999999
Q ss_pred eEEEecChhhHH
Q 001154 385 QIVYQGPRVSVL 396 (1136)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1136)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999998874
No 105
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-38 Score=325.32 Aligned_cols=205 Identities=25% Similarity=0.307 Sum_probs=176.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC----CCceEEEEeccC--CCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQD--WQVA 222 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 222 (1136)
++|+|||++|.+||.++|+|+||||||||.++|+|+..|+ +|+|+++|.+..... ..+.+-+|+||+ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999886 999999998765542 357899999997 4678
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
..||++.|.-+.+..+.. +.+.++.++|+.+||+...- ++
T Consensus 98 ~~tv~~~l~Epl~~~~~~------------------------------------~~~~~i~~~L~~VgL~~~~l----~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLS------------------------------------KSQQRIAELLDQVGLPPSFL----DR 137 (252)
T ss_pred chhHHHHHhhhhccCCcc------------------------------------HHHHHHHHHHHHcCCCHHHH----hc
Confidence 899999997655432211 11234788999999986432 24
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
....|||||||||+|||||..+|++|++|||||+||++...+|++.|.++.+.. +.+.+.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~-~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKER-GLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhc-CceEEEEeCcHHHHHHHhhheeeee
Confidence 456799999999999999999999999999999999999999999999998764 5667779999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 001154 383 EGQIVYQGPRVSVLD 397 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1136)
+|++++.++.+++..
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998864
No 106
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.1e-38 Score=339.53 Aligned_cols=194 Identities=25% Similarity=0.324 Sum_probs=165.6
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1136)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 469999999999999999999999999999999999876 468999999987532 124567999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.+||+||+.+....+. .......+.++++++.+++.+..+... .+||||||||++|||||+.+|++||||||
T Consensus 94 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP 165 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLSGGEQQRVAIARAIVHKPPLLLADEP 165 (216)
T ss_pred cccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999988654332 122334456789999999987766543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
|+|||+.++..+.+.|++++++|+|||++||+++ .+...+|++++|.+ |+
T Consensus 166 t~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 166 TGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999998777999999999976 46678999999985 54
No 107
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.3e-38 Score=357.81 Aligned_cols=206 Identities=22% Similarity=0.302 Sum_probs=178.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-------CceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1136)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++....+ ++.++||+|++.+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 46999999999999999999999999999999999999876 9999999998875443 5689999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++++||+||+.|+.+..+... .+...++.++++.+||++..++.++
T Consensus 83 ~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p~ 128 (363)
T TIGR01186 83 FPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYPD 128 (363)
T ss_pred CCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCChh
Confidence 999999999999765432110 0012347888999999887776554
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
.|||||||||+|||||+.+|++|||||||+|||+.++.++.+.++++.+.. +.+|+.++|+..++..++|+|++
T Consensus 129 -----~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~-~~Tii~vTHd~~ea~~~~drI~v 202 (363)
T TIGR01186 129 -----ELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATL-QKTIVFITHDLDEAIRIGDRIVI 202 (363)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 599999999999999999999999999999999999999999999886543 45566688999999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 001154 381 LSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1136)
|.+|+++..|+++++.
T Consensus 203 l~~G~iv~~g~~~ei~ 218 (363)
T TIGR01186 203 MKAGEIVQVGTPDEIL 218 (363)
T ss_pred EeCCEEEeeCCHHHHH
Confidence 9999999999998875
No 108
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.9e-38 Score=310.49 Aligned_cols=200 Identities=26% Similarity=0.378 Sum_probs=177.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1136)
..+|+|||+.|++||++-|+||||||||||||.|.+...|+ +|+|.+||+++.... .+|.||+|+|+..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 56999999999999999999999999999999999998886 999999999986543 258999999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+..||.||++|+.+..|... .+.+.++.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC---
Confidence 99999999999988765432 11245689999999999988754
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
...|||||+|||+||||++.+|++|+-||||-.||+..+.+|++.+.++.+. +|+|++.+|+..-+..+-.+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~--GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRL--GTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhc--CcEEEEEeccHHHHHhccCcEEEE
Confidence 3479999999999999999999999999999999999999999999998753 678888889999998999999999
Q ss_pred cCCeEEEecC
Q 001154 382 SEGQIVYQGP 391 (1136)
Q Consensus 382 ~~G~iv~~G~ 391 (1136)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 109
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=9.5e-38 Score=353.36 Aligned_cols=204 Identities=26% Similarity=0.373 Sum_probs=176.7
Q ss_pred ccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCC
Q 001154 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSP 915 (1136)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~ 915 (1136)
.++++.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.+... ...++.+||++|++.+++
T Consensus 11 ~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~ 88 (301)
T TIGR03522 11 LYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYL 88 (301)
T ss_pred EECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccChHHHHhceEEecCCCCCCC
Confidence 3455789999999999999999999999999999999999876 568999999987643 234567999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.+|+.||+.|.+.++. ....+..+.++++++.+++.+..+..+ +.||+|||||++||+||+.+|++||||||
T Consensus 89 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lliLDEP 160 (301)
T TIGR03522 89 DMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYRQRVGLAQALIHDPKVLILDEP 160 (301)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999998765542 222334456789999999988877654 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|+ +|++++.|+.
T Consensus 161 t~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~-~G~i~~~g~~ 216 (301)
T TIGR03522 161 TTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIIN-KGKIVADKKL 216 (301)
T ss_pred cccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999864 799999999986 5778899999998 5899999885
No 110
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.3e-37 Score=341.18 Aligned_cols=206 Identities=29% Similarity=0.389 Sum_probs=172.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c-ccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~ 915 (1136)
++..+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.+++
T Consensus 11 ~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~ 88 (236)
T cd03219 11 GGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFP 88 (236)
T ss_pred CCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEeccccccc
Confidence 44579999999999999999999999999999999999876 4689999999876431 1 2356899999999999
Q ss_pred CCcHHHHHHHHhhhcCCCc-------ccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 001154 916 GLTVLESLLFSAWLRLPSE-------IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~-------~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1136)
.+||+||+.+....+.... .......+.++++++.+++.+..+..+ ..||||||||++|||||+.+|+
T Consensus 89 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~ 163 (236)
T cd03219 89 ELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA-----GELSYGQQRRLEIARALATDPK 163 (236)
T ss_pred CCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999988654321110 012334456788999999977666543 4799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 164 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 164 LLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 99999999999999999999999999778999999999986 46678999999985 789888864
No 111
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.1e-37 Score=359.53 Aligned_cols=218 Identities=27% Similarity=0.373 Sum_probs=184.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1136)
.++|+|+|+++++|++++|+|||||||||||++|+|+++++ +|+|.++|.++....+ +|.++||+|++.+||++||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999876 9999999998865433 4779999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+|||.|+.+.++... .+...+++++++.+||.+..+..+ ..
T Consensus 104 ~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQ 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999764322110 001234788999999998877655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+|||||+.+|++|+||||++|||..++.++.+.|+++.+.. ++++|.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999988754 45666688999999999999999999999
Q ss_pred EEecChhhHHHHHHhcCCCCCCCCChHHHH
Q 001154 387 VYQGPRVSVLDFFASMGFSCPKRKNVADFL 416 (1136)
Q Consensus 387 v~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 416 (1136)
+..|+++++. ..|...-+|+|+
T Consensus 224 ~~~g~~~~i~--------~~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIY--------EEPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHH--------hCcccHHHHHhc
Confidence 9999998873 245544555554
No 112
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.2e-37 Score=340.61 Aligned_cols=204 Identities=24% Similarity=0.338 Sum_probs=172.9
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c-ccceEEEeccCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHS 914 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~ 914 (1136)
++++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.++
T Consensus 10 ~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 87 (232)
T cd03218 10 YGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIF 87 (232)
T ss_pred eCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCcccc
Confidence 345679999999999999999999999999999999999876 4689999999875321 2 235689999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+|++||+.+....+. .......+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||
T Consensus 88 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDE 159 (232)
T cd03218 88 RKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGERRRVEIARALATNPKFLLLDE 159 (232)
T ss_pred ccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999987643322 122334456788999999977666543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 160 Pt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 217 (232)
T cd03218 160 PFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIY-EGKVLAEGTP 217 (232)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEEeCH
Confidence 99999999999999999999877999999999986 5788899999998 5789888875
No 113
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=9.4e-38 Score=361.96 Aligned_cols=209 Identities=28% Similarity=0.361 Sum_probs=177.8
Q ss_pred ccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCC
Q 001154 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~ 914 (1136)
.++++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 12 ~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~ 89 (402)
T PRK09536 12 EFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVEALSARAASRRVASVPQDTSLS 89 (402)
T ss_pred EECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcCcCCHHHHhcceEEEccCCCCC
Confidence 3456789999999999999999999999999999999999876 468999999987643 34567899999999998
Q ss_pred CCCcHHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 915 PGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
+.+||+|++.++...+.. ........++.++++++.+++.+..+..+ .+||||||||+.|||||+++|+|||||
T Consensus 90 ~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSgGerQRv~IArAL~~~P~iLLLD 164 (402)
T PRK09536 90 FEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSGGERQRVLLARALAQATPVLLLD 164 (402)
T ss_pred CCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 999999999875421110 00012334567899999999988877654 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|+ +|++++.|+..
T Consensus 165 EPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~-~G~iv~~G~~~ 224 (402)
T PRK09536 165 EPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLA-DGRVRAAGPPA 224 (402)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEecCHH
Confidence 999999999999999999999877999999999987 5778899999998 57999999864
No 114
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.3e-38 Score=309.81 Aligned_cols=196 Identities=28% Similarity=0.359 Sum_probs=172.3
Q ss_pred eeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCCCCCCCCcHHHHHHH
Q 001154 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLESLLF 925 (1136)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~ltv~e~l~~ 925 (1136)
..+++|.+||++||+|||||||||||++|+|... +.+|+|.|||.+... ....|-++.++|+..+|..+||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 5677899999999999999999999999999887 568999999998654 3456778999999999999999999987
Q ss_pred HhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 001154 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1136)
Q Consensus 926 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1005 (1136)
+..-.+ .-..+.++.++.++..+||.++.+++. .+|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~L---kL~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL---KLNAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc---ccCHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643211 112455677899999999999888764 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1006 IVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1006 ~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
++..++.++++ ++.|++++||+|+ +....+|+++++++ |+|.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999975 5999999999998 78999999999985 899999986
No 115
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.3e-37 Score=335.65 Aligned_cols=201 Identities=27% Similarity=0.389 Sum_probs=169.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh-cccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++..|
T Consensus 11 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (213)
T cd03301 11 GNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMT 88 (213)
T ss_pred CCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCC
Confidence 44579999999999999999999999999999999999876 4689999999876432 22457999999998888999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
++||+.+....+. ....+.++.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+|
T Consensus 89 v~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~ 160 (213)
T cd03301 89 VYDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSN 160 (213)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999987643321 223334456788999999987666543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|.+ |++++.|
T Consensus 161 LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 161 LDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 9999999999999999764 899999999976 46778999999985 7888765
No 116
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=359.72 Aligned_cols=204 Identities=25% Similarity=0.356 Sum_probs=177.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
++..+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...+|.+|||+|++.++|++|
T Consensus 30 ~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~lt 107 (377)
T PRK11607 30 DGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMT 107 (377)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCC
Confidence 44679999999999999999999999999999999999877 568999999987643 234678999999999999999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
|.||+.|....+. ....+.++.++++++.+++.+..+... .+|||||||||+|||||+.+|++|+|||||++
T Consensus 108 v~eNi~~~l~~~~---~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~ 179 (377)
T PRK11607 108 VEQNIAFGLKQDK---LPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQRQRVALARSLAKRPKLLLLDEPMGA 179 (377)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999999754332 234455667899999999988777653 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 999 LDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||+.++..+.+.|+++.+ .|.|+|++|||++ ++...+|++++|+ +|+++..|+..
T Consensus 180 LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~-~G~i~~~g~~~ 235 (377)
T PRK11607 180 LDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMN-RGKFVQIGEPE 235 (377)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEe-CCEEEEEcCHH
Confidence 999999999999998865 4999999999986 6788999999998 57999999853
No 117
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=360.64 Aligned_cols=205 Identities=27% Similarity=0.382 Sum_probs=176.6
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCCCCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~l 917 (1136)
++++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+
T Consensus 13 ~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~ 90 (369)
T PRK11000 13 YGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHL 90 (369)
T ss_pred eCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCCCCHhHCCEEEEeCCcccCCCC
Confidence 345679999999999999999999999999999999999876 468999999987643 12346799999999999999
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
||+||+.|....+. ....+.++.++++++.+++.+..+... .+|||||||||+|||||+.+|++|||||||+
T Consensus 91 tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~QRvaLAraL~~~P~lLLLDEPts 162 (369)
T PRK11000 91 SVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQRVAIGRTLVAEPSVFLLDEPLS 162 (369)
T ss_pred CHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 99999998764332 223444567889999999987776654 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|||+.++..+.+.|+++.++ |.|||++|||++ ++...+|++++|+ +|+++..|+..
T Consensus 163 ~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~-~G~i~~~g~~~ 219 (369)
T PRK11000 163 NLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLD-AGRVAQVGKPL 219 (369)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 99999999999999998764 999999999986 5778899999998 47999998753
No 118
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-38 Score=323.23 Aligned_cols=212 Identities=25% Similarity=0.372 Sum_probs=191.6
Q ss_pred cccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccC
Q 001154 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQN 910 (1136)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~ 910 (1136)
++.++++.++++.+++||||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+++.. .+.+|||.|.+
T Consensus 4 ~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEE 80 (300)
T COG4152 4 EIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEE 80 (300)
T ss_pred EEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhh
Confidence 44556677889999999999999999999999999999999999999887 5699999999987654 35578999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
..+++.+||.|.|.|.|.++. ++.++.+..+..+|+.+++.......+ .+||-|++|++.+-.+++++|+++
T Consensus 81 RGLy~k~tv~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLl 152 (300)
T COG4152 81 RGLYPKMTVEDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELL 152 (300)
T ss_pred hccCccCcHHHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEE
Confidence 999999999999999998874 556777788899999999998877665 579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+||||+|||||.+.+.+.+.+.+++++|.|||+++|+++ .+.+.||++++|++ |+.|..|+..
T Consensus 153 ILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 153 ILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred EecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 999999999999999999999999999999999999987 68899999999985 7888889864
No 119
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=357.18 Aligned_cols=203 Identities=26% Similarity=0.333 Sum_probs=174.4
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh------cccceEEEeccCCCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHS 914 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~ 914 (1136)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... .+++.+||++|++.++
T Consensus 17 ~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 17 TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 4679999999999999999999999999999999999876 4689999999876431 2356799999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+||+||+.+....+. ....+.++.++++++.+++.+..+... .+||||||||++|||||+.+|+||||||
T Consensus 95 ~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qRv~lAraL~~~p~iLlLDE 166 (343)
T PRK11153 95 SSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALASNPKVLLCDE 166 (343)
T ss_pred CCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 99999999998754332 223344567889999999987766543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|+ +|++++.|+..
T Consensus 167 Pts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~-~G~i~~~g~~~ 226 (343)
T PRK11153 167 ATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVID-AGRLVEQGTVS 226 (343)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 99999999999999999999764 899999999986 4677899999998 57999988753
No 120
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.1e-37 Score=337.40 Aligned_cols=198 Identities=28% Similarity=0.428 Sum_probs=169.9
Q ss_pred EEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCCcHH
Q 001154 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTVL 920 (1136)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~ltv~ 920 (1136)
.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++.+||+
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 69999999999999999999999999999999999876 468999999987643 23456799999999989999999
Q ss_pred HHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 001154 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1136)
Q Consensus 921 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1136)
||+.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 99987654332 223344567789999999987666543 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
+.++..+.+.|+++.++|+|||++||+++ ++...+|++++|++ |++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999999777999999999976 56778999999985 7887653
No 121
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-37 Score=340.31 Aligned_cols=206 Identities=28% Similarity=0.377 Sum_probs=171.8
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh-cccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lt 918 (1136)
++..+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 13 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t 90 (239)
T cd03296 13 GDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDATDVPVQERNVGFVFQHYALFRHMT 90 (239)
T ss_pred CCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCccccceEEEecCCcccCCCC
Confidence 44679999999999999999999999999999999999876 4689999999876432 22456999999999888999
Q ss_pred HHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 919 VLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 919 v~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|+||+.+....+.. .........+.++++++.+++.+..+..+ ..||+|||||++|||||+.+|++|+|||||+
T Consensus 91 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP~~ 165 (239)
T cd03296 91 VFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEPFG 165 (239)
T ss_pred HHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999886533211 00112233456788999999977666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 166 ~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 221 (239)
T cd03296 166 ALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMN-KGRIEQVGTP 221 (239)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEecCH
Confidence 99999999999999999765 899999999986 4677899999997 4789988874
No 122
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.3e-37 Score=334.32 Aligned_cols=197 Identities=27% Similarity=0.414 Sum_probs=168.3
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
++..+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|
T Consensus 11 ~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (208)
T cd03268 11 GKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLT 88 (208)
T ss_pred CCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCc
Confidence 44679999999999999999999999999999999999876 468999999987543 234567999999998889999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
++||+.+....+. . .++.++++++.+++.+..+... ..|||||||||+|||+|+.+|++|+|||||+|
T Consensus 89 v~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~ 156 (208)
T cd03268 89 ARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNG 156 (208)
T ss_pred HHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccc
Confidence 9999987653321 1 1345778899999987666543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
||+.++..+++.|++++++|+|||++||++. .+.+.+|++++|++ |++++.|
T Consensus 157 LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 157 LDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999998777999999999976 46678999999985 7887654
No 123
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.9e-38 Score=334.40 Aligned_cols=192 Identities=28% Similarity=0.387 Sum_probs=162.8
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCC-CCCCCcHH
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDI-HSPGLTVL 920 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~ltv~ 920 (1136)
+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.....++.+||++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 579999999999999999999999999999999999876 468999999987654445667999999974 33467999
Q ss_pred HHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 001154 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLD 1000 (1136)
Q Consensus 921 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD 1000 (1136)
||+.+...... ...+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKELD-------AGNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhcC-------ccHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 99987543221 11245788999999987766543 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 001154 1001 ARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1136)
Q Consensus 1001 ~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1049 (1136)
+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999986 46678999999985 6653
No 124
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-38 Score=322.49 Aligned_cols=212 Identities=26% Similarity=0.365 Sum_probs=176.3
Q ss_pred ccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEe
Q 001154 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYC 907 (1136)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv 907 (1136)
+++....|++.++|++|||++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.+++. ...++-++||
T Consensus 6 v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit~~p~~~r~r~Gi~~V 83 (237)
T COG0410 6 VENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDITGLPPHERARLGIAYV 83 (237)
T ss_pred EEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecCCCCHHHHHhCCeEeC
Confidence 3444556788999999999999999999999999999999999999877 458999999998754 3456679999
Q ss_pred ccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcC-CCccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 001154 908 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1136)
Q Consensus 908 ~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~ 986 (1136)
||....||.+||+|||..++..+... ......++++.+++- |.+..+... ..|||||||.|+|||||+.+
T Consensus 84 PegR~iF~~LTVeENL~~g~~~~~~~----~~~~~~~e~v~~lFP~Lker~~~~a-----G~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 84 PEGRRIFPRLTVEENLLLGAYARRDK----EAQERDLEEVYELFPRLKERRNQRA-----GTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred cccccchhhCcHHHHHhhhhhccccc----ccccccHHHHHHHChhHHHHhcCcc-----cCCChHHHHHHHHHHHHhcC
Confidence 99999999999999999876544221 111122567777664 444444443 37999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
|++|+|||||.||-|.-.+.|.++|++++++ |.||+++-+... ...+.+||.++|. .|++++.|+..+
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle-~Griv~~G~~~e 223 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLE-NGRIVLSGTAAE 223 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEe-CCEEEEecCHHH
Confidence 9999999999999999999999999999865 789999999876 4778899999998 589999998643
No 125
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-37 Score=332.95 Aligned_cols=207 Identities=27% Similarity=0.384 Sum_probs=180.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCC----CCCCCceEEEEeccC-CCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFK----EFVPPRTSAYVSQQD-WQVA 222 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 222 (1136)
..+|+|+|+.|++|+.++|+||||||||||+++|+|++.|. +|+|.++|.+.. ....++.+|||+|++ .++.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999886 899999999865 223468899999996 5677
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
.-||.|.++|+.+..+.... +...+++.+++.+||.+.++..
T Consensus 94 ~~tV~~evafg~~n~g~~~~----------------------------------e~~~rv~~~l~~vgl~~~~~r~---- 135 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPRE----------------------------------EIEERVAEALELVGLEELLDRP---- 135 (235)
T ss_pred cCcHHHHHhhchhhcCCCHH----------------------------------HHHHHHHHHHHHcCchhhccCC----
Confidence 78999999998876654210 1234689999999999987754
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
+..|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++... ++.++|.++|+.+.+..++|++++|+
T Consensus 136 -p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 136 -PFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred -ccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 4569999999999999999999999999999999999999999999999865 35566778999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 001154 383 EGQIVYQGPRVSVLD 397 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1136)
+|+++++|++.++..
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877643
No 126
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.6e-37 Score=338.34 Aligned_cols=204 Identities=25% Similarity=0.316 Sum_probs=169.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCC-----CCceeEEEEEEcCccCCh-----hcccceEEEecc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK-----TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQ 909 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~-----~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q 909 (1136)
+++.+|+|+||+|++||++||+||||||||||+++|+|.. + +.+|+|.++|.++.. ..+++.+||++|
T Consensus 11 ~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q 88 (227)
T cd03260 11 GDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQ 88 (227)
T ss_pred CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEec
Confidence 4457999999999999999999999999999999999986 4 568999999987532 234567999999
Q ss_pred CCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 001154 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1136)
Q Consensus 910 ~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1136)
++.++ .+||+||+.+....+.. ......++.++++++.+++.+..+.... +.+||||||||++|||||+.+|++
T Consensus 89 ~~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~l 162 (227)
T cd03260 89 KPNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEV 162 (227)
T ss_pred Cchhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCE
Confidence 98887 79999999886543311 1112234567889999999766554320 257999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+|||||+|||+.++..+++.|++++++ +|||++||+++ .+.+.+|++++|.+ |++++.|+.
T Consensus 163 lllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 224 (227)
T cd03260 163 LLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLVEFGPT 224 (227)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEecCc
Confidence 9999999999999999999999999776 99999999976 46678999999984 799988875
No 127
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=8.7e-38 Score=306.83 Aligned_cols=201 Identities=25% Similarity=0.369 Sum_probs=173.4
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCHHHHHH
Q 001154 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTVRETLD 231 (1136)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1136)
.+++.|++||+++|+|||||||||||+.|||...|. +|+|.+||.+.....+ +|-++.++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478899999999999999999999999999999876 9999999999876655 588999999999999999999998
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhh
Q 001154 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1136)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1136)
++.. ++-+.. .....+++.++...||..+.+.+.+ .|||||
T Consensus 94 LGl~---P~LkL~-------------------------------a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKLN-------------------------------AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCC---cccccC-------------------------------HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 8642 111100 0113358899999999999887665 599999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecC
Q 001154 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1136)
Q Consensus 312 kkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~ 391 (1136)
||||++||+|+.+-+||+||||+|+||+.-+.++...+.+++.+.+.|+++ ++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999998876555554 6677789999999999999999999999
Q ss_pred hhhHH
Q 001154 392 RVSVL 396 (1136)
Q Consensus 392 ~~~~~ 396 (1136)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 87764
No 128
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.6e-38 Score=368.02 Aligned_cols=213 Identities=26% Similarity=0.431 Sum_probs=175.5
Q ss_pred CCCcceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCC
Q 001154 143 GNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW 219 (1136)
Q Consensus 143 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~ 219 (1136)
..+++.+||+|+|++|+|||.+||+||||+||||+.+.|...+.|. +|+|++||+|+.+..+ ++.+|+|.|+|.
T Consensus 476 P~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPv 552 (716)
T KOG0058|consen 476 PTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPV 552 (716)
T ss_pred CCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccce
Confidence 3456678999999999999999999999999999999999999887 9999999999988765 588999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 299 (1136)
+|.. ||+|||.|+.. ....+.+..+++ .++ ..+. +.++++.+||.|
T Consensus 553 LFs~-sI~eNI~YG~~----~~t~e~i~~AAk---~AN-----------------------ah~F---I~~~p~gY~T~V 598 (716)
T KOG0058|consen 553 LFSG-SIRENIAYGLD----NATDEEIEAAAK---MAN-----------------------AHEF---ITNFPDGYNTVV 598 (716)
T ss_pred eecc-cHHHHHhcCCC----CCCHHHHHHHHH---HhC-----------------------hHHH---HHhCcccccccc
Confidence 8775 99999999754 111122221111 111 0122 346899999999
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
|+++. .||||||||++|||||+.+|+||+|||.||+||+.+...+.+.|.+..+ + .||++|.|.. .+.+.+|+|+
T Consensus 599 GEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~-rTVlvIAHRL-STV~~Ad~Iv 673 (716)
T KOG0058|consen 599 GEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--G-RTVLVIAHRL-STVRHADQIV 673 (716)
T ss_pred CCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--C-CeEEEEehhh-hHhhhccEEE
Confidence 98655 6999999999999999999999999999999999999999999987754 3 4455566655 5668899999
Q ss_pred EEcCCeEEEecChhhHHH
Q 001154 380 LLSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~~ 397 (1136)
++++|++++.|+++++++
T Consensus 674 vi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 674 VIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEcCCeEEecccHHHHhh
Confidence 999999999999999874
No 129
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.3e-37 Score=348.89 Aligned_cols=186 Identities=22% Similarity=0.216 Sum_probs=138.6
Q ss_pred EEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHHH
Q 001154 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLES 922 (1136)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e~ 922 (1136)
+++.+++..+..-...+++|+||+||||+++++.|... +..|.+.+.+ +.+++|-.|...-+-.+.|-+-
T Consensus 378 ~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~--------r~ri~~f~Qhhvd~l~~~v~~v 447 (582)
T KOG0062|consen 378 QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP--------RLRIKYFAQHHVDFLDKNVNAV 447 (582)
T ss_pred hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc--------cceecchhHhhhhHHHHHhHHH
Confidence 67889999999999999999999999999999998655 3567766654 4568999997654444444332
Q ss_pred HHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 001154 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1136)
Q Consensus 923 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~ 1002 (1136)
- +-...+ |. . .++.+++-+..+||..-. ... .+.+||||||-||++|.....+|.+|+|||||+.||..
T Consensus 448 d-~~~~~~-pG-~----~~ee~r~hl~~~Gl~g~l---a~~-si~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~d 516 (582)
T KOG0062|consen 448 D-FMEKSF-PG-K----TEEEIRRHLGSFGLSGEL---ALQ-SIASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRD 516 (582)
T ss_pred H-HHHHhC-CC-C----CHHHHHHHHHhcCCCchh---hhc-cccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHH
Confidence 2 222222 11 1 123356677777876422 111 24689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 001154 1003 AAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1136)
Q Consensus 1003 ~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1053 (1136)
+-..+.++|+++ +..|||||||.++ +-..|+.+.+.++|...-..|.
T Consensus 517 sl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 517 SLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred HHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeecc
Confidence 999999999875 5689999999764 6677999999986543334444
No 130
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.5e-38 Score=381.91 Aligned_cols=256 Identities=29% Similarity=0.424 Sum_probs=200.4
Q ss_pred hHhhHHHHHHHhhcccCChHHHHHHHHHHHHhcCCCCC--CcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHH
Q 001154 61 VQEQRLVLDRLVNAVEDDPERFFDRMRKRCEAVDLELP--KIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQL 138 (1136)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 138 (1136)
.++-+...+|+.++.+.++|.-.. +.....| .=+++|+|+++.=.
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~-------~~~~~~~~~~g~I~~~nvsf~y~-------------------------- 482 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGD-------KTLIHLPKLQGEIEFENVSFRYG-------------------------- 482 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccc-------cccccccccCceEEEEEEEEEeC--------------------------
Confidence 456788888999998888873111 1112233 34799999985521
Q ss_pred hHhcCCCcceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEe
Q 001154 139 RIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVS 215 (1136)
Q Consensus 139 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~ 215 (1136)
. .+..+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+++.+... ++.++||+
T Consensus 483 -----~-~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~ 553 (709)
T COG2274 483 -----P-DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVL 553 (709)
T ss_pred -----C-CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEc
Confidence 1 2236999999999999999999999999999999999999887 9999999999887754 68999999
Q ss_pred ccCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccc
Q 001154 216 QQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1136)
Q Consensus 216 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~ 295 (1136)
|++.+|. .||+||+.++.. ....+.+.++++. .+. -+. +..|+..+
T Consensus 554 Q~~~Lf~-gSI~eNi~l~~p----~~~~e~i~~A~~~---------------------ag~-----~~f---I~~lP~gy 599 (709)
T COG2274 554 QDPFLFS-GSIRENIALGNP----EATDEEIIEAAQL---------------------AGA-----HEF---IENLPMGY 599 (709)
T ss_pred ccchhhc-CcHHHHHhcCCC----CCCHHHHHHHHHH---------------------hCc-----HHH---HHhccccc
Confidence 9998655 699999988532 1122222222211 110 111 34588999
Q ss_pred cccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhc
Q 001154 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1136)
Q Consensus 296 dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~ 375 (1136)
||.||+ +..+||||||||++|||||+.+|+||+||||||+||+.+...|.+.|.++.+ ++|+|++. |. ..+...|
T Consensus 600 ~t~v~E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~Ia-HR-l~ti~~a 674 (709)
T COG2274 600 DTPVGE-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIA-HR-LSTIRSA 674 (709)
T ss_pred cccccc-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEE-cc-chHhhhc
Confidence 999996 5568999999999999999999999999999999999999999999998864 45665544 43 3578899
Q ss_pred CeEEEEcCCeEEEecChhhHHH
Q 001154 376 DDVILLSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 376 D~vilL~~G~iv~~G~~~~~~~ 397 (1136)
|+|++|++|+++.+|+.+++++
T Consensus 675 drIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 675 DRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred cEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999976
No 131
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.8e-37 Score=335.77 Aligned_cols=193 Identities=31% Similarity=0.449 Sum_probs=164.1
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh------c-ccceEEEeccCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------T-FARISGYCEQNDIHS 914 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~~~~~ 914 (1136)
+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 579999999999999999999999999999999999876 4689999999875421 1 245799999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+|++||+.+....+. ......++.++++++.+++.+..+..+ ..||||||||++|||||+.+|+||||||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998754432 122334456788999999987666543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
||+|||+.++..+.+.|+++++ .|+|||++||+++. + +.+|++++|++ |+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRD-GK 217 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeC-Cc
Confidence 9999999999999999999976 59999999999763 4 48999999985 44
No 132
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-37 Score=338.07 Aligned_cols=200 Identities=27% Similarity=0.341 Sum_probs=171.1
Q ss_pred EEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh------cccceEEEeccCCCCCCC
Q 001154 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~~ 916 (1136)
.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 79999999999999999999999999999999999876 4689999999876421 235679999999999999
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
+|++||+.+....+. .......+.++++++.+++.+..+... ..||||||||++|||||+.+|++|+|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999988654332 222334456788999999987666543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVME-KGEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999998765 899999999976 4667899999997 5799988864
No 133
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-37 Score=340.17 Aligned_cols=204 Identities=28% Similarity=0.377 Sum_probs=169.6
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1136)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 579999999999999999999999999999999999876 468999999987542 234567999999999999
Q ss_pred CCcHHHHHHHHhhhc-----CCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 916 GLTVLESLLFSAWLR-----LPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr-----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+||+||+.+..... ...........+.+.++++.+++.+..+... ..||||||||++|||||+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA-----DQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998753210 0001111233456788899999976655533 579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||||+|||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|.+ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999999764 899999999987 46678999999984 789988875
No 134
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-37 Score=335.04 Aligned_cols=200 Identities=28% Similarity=0.401 Sum_probs=168.7
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhc------c-cceEEEeccCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQET------F-ARISGYCEQNDIHS 914 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~------~-~~~~gyv~Q~~~~~ 914 (1136)
..+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... + ++.+||++|++.++
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~ 99 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLL 99 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccC
Confidence 579999999999999999999999999999999999876 46899999998764311 2 25699999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+|++||+.+....+. ....+.++.++++++.+++.+..+... ..||||||||++|||||+.+|+||||||
T Consensus 100 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDE 171 (233)
T PRK11629 100 PDFTALENVAMPLLIGK---KKPAEINSRALEMLAAVGLEHRANHRP-----SELSGGERQRVAIARALVNNPRLVLADE 171 (233)
T ss_pred CCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999988654321 122334456889999999987666543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||+|||+.++..+.+.|+++++ +|+|||++||+++ ..+.+|++++|. +|+++..+++
T Consensus 172 Pt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~--~~~~~~~~~~l~-~G~i~~~~~~ 229 (233)
T PRK11629 172 PTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ--LAKRMSRQLEMR-DGRLTAELSL 229 (233)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhhCEEEEEE-CCEEEEEecc
Confidence 9999999999999999999875 5899999999975 344568999997 5799988875
No 135
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-37 Score=343.30 Aligned_cols=209 Identities=23% Similarity=0.269 Sum_probs=175.9
Q ss_pred ccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c----ccceEEE
Q 001154 834 QEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T----FARISGY 906 (1136)
Q Consensus 834 ~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gy 906 (1136)
+..+.+++..+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.+||
T Consensus 29 ~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~ 106 (269)
T cd03294 29 EILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISM 106 (269)
T ss_pred hhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEE
Confidence 44555677889999999999999999999999999999999999876 4689999999875421 1 2357999
Q ss_pred eccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 001154 907 CEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1136)
Q Consensus 907 v~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~ 986 (1136)
++|++.+++.+|++||+.+...... .......+.++++++.+++.+..+..+ ..||||||||++|||||+.+
T Consensus 107 v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~ 178 (269)
T cd03294 107 VFQSFALLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVD 178 (269)
T ss_pred EecCcccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcC
Confidence 9999999989999999988643321 122334456788999999987766554 47999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+||||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 179 p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 245 (269)
T cd03294 179 PDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMK-DGRLVQVGTP 245 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999999998754 899999999976 4677899999997 5789988874
No 136
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.5e-37 Score=337.59 Aligned_cols=204 Identities=25% Similarity=0.370 Sum_probs=172.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-----hcccceEEEeccCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~ 914 (1136)
+++.+|+|+||++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.++
T Consensus 12 ~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 89 (240)
T PRK09493 12 GPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLF 89 (240)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccC
Confidence 44679999999999999999999999999999999999876 468999999987642 23456799999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+||+||+.+...... .....+..+.+.++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||
T Consensus 90 ~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDE 162 (240)
T PRK09493 90 PHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSGGQQQRVAIARALAVKPKLMLFDE 162 (240)
T ss_pred CCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 89999999987542111 1223334556789999999977666543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 163 P~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 220 (240)
T PRK09493 163 PTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFID-KGRIAEDGDP 220 (240)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeeCCH
Confidence 99999999999999999998777999999999986 4667799999998 4799998875
No 137
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-37 Score=345.71 Aligned_cols=201 Identities=24% Similarity=0.345 Sum_probs=169.9
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-----hcccceEEEeccCCC-CCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 915 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 915 (1136)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+|||+|++. .+.
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 97 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLF 97 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECCCcCccHHHHhhceEEEecCchhccc
Confidence 469999999999999999999999999999999999876 468999999987643 234678999999863 334
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC--ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT--SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~--~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
..||+||+.|..... ....++..+.++++++.++|. +..+.. +..||||||||++|||||+.+|++||||
T Consensus 98 ~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~LSgGq~qrv~iAraL~~~P~llllD 169 (287)
T PRK13637 98 EETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFELSGGQKRRVAIAGVVAMEPKILILD 169 (287)
T ss_pred cccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 579999999865432 233444556788999999996 445543 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 170 EPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~i~~~g~~ 229 (287)
T PRK13637 170 EPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GKCELQGTP 229 (287)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999765 999999999976 46678999999985 799999875
No 138
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4.6e-37 Score=352.96 Aligned_cols=210 Identities=27% Similarity=0.384 Sum_probs=178.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1136)
+++|+|+|++|++||+++|+|||||||||||++|+|.++++ +|+|+++|+++....+ ++.++||+|++.+++.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999998876 9999999998765433 3679999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.|+.+......... ..+...+++++++.+||++..|..+ ..
T Consensus 92 ~eni~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRERPN------------------------------AAAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhcccccCCC------------------------------HHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999754321000000 0011235788999999988777655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEEL-KFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 45666788999999999999999999999
Q ss_pred EEecChhhHH
Q 001154 387 VYQGPRVSVL 396 (1136)
Q Consensus 387 v~~G~~~~~~ 396 (1136)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 139
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.1e-37 Score=349.61 Aligned_cols=206 Identities=27% Similarity=0.387 Sum_probs=177.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC--CCceEEEEeccCCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1136)
+++|+|+|+.|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999876 999999998775321 2356999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.|.++..+... .....+++++++.+||.+..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998655432110 0012247789999999988877664
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++. +++|+.++|..+++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE--GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 59999999999999999999999999999999999999999999998753 4567778899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001154 386 IVYQGPRVSVLD 397 (1136)
Q Consensus 386 iv~~G~~~~~~~ 397 (1136)
+++.|+.+++..
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988754
No 140
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.8e-37 Score=333.72 Aligned_cols=200 Identities=30% Similarity=0.448 Sum_probs=170.4
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCCcH
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++.+|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 579999999999999999999999999999999999876 468999999987642 2345679999999998889999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+||+.+....+. .......+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654332 122333456788999999977666543 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+.++..+.+.|+++++ ++|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999865 699999999986 46678999999985 789888764
No 141
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-37 Score=339.04 Aligned_cols=202 Identities=26% Similarity=0.349 Sum_probs=171.0
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcH
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+.+||++|++.+++.+|+
T Consensus 12 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv 87 (255)
T PRK11248 12 GGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNV 87 (255)
T ss_pred CCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcH
Confidence 44679999999999999999999999999999999999876 468999999987643 23458999999988888999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+||+.+....+. ....+..+.+.++++.+++.+..+... ..||||||||++|||||+.+|++|||||||+||
T Consensus 88 ~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lllLDEPt~~L 159 (255)
T PRK11248 88 QDNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQRVGIARALAANPQLLLLDEPFGAL 159 (255)
T ss_pred HHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 999987643321 223334456889999999977665433 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEec-CcEEEEeCCC
Q 001154 1000 DARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKR-GGELIYAGPL 1054 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~-gG~~~~~g~~ 1054 (1136)
|+.++..+.+.|+++++ .|+|||++||+++ .+...+|++++|++ +|+++..++.
T Consensus 160 D~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 160 DAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999854 5899999999986 57788999999985 5899887764
No 142
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-37 Score=335.46 Aligned_cols=206 Identities=25% Similarity=0.355 Sum_probs=172.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1136)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999998876 999999998875432 245799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||+||+.++......... .+...+++.+++.+||.+..++.++
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 135 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLSE---------------------------------EEIREIVLEKLEAVGLRGAEDLYPA- 135 (235)
T ss_pred CCCcHHHHHHHHHhhccCCCH---------------------------------HHHHHHHHHHHHHcCCchhhcCChh-
Confidence 999999999886432100000 0012246778999999877666554
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..+||+|++|
T Consensus 136 ----~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 136 ----ELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcCEEEEE
Confidence 699999999999999999999999999999999999999999999987532 456666889999999999999999
Q ss_pred cCCeEEEecChhhH
Q 001154 382 SEGQIVYQGPRVSV 395 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1136)
++|++++.|+.+++
T Consensus 211 ~~G~i~~~g~~~~~ 224 (235)
T cd03261 211 YDGKIVAEGTPEEL 224 (235)
T ss_pred ECCeEEEecCHHHH
Confidence 99999999988765
No 143
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.9e-37 Score=334.16 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=167.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c-ccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .++.++|++|++.+++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (222)
T cd03224 11 GKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFP 88 (222)
T ss_pred CCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCC
Confidence 45679999999999999999999999999999999999876 4689999999875421 1 2456999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHc-CCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
.+|++||+.+....+. .......+.++++.+ ++.+..+.. +..||||||||++|||||+.+|++|+|||
T Consensus 89 ~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDE 158 (222)
T cd03224 89 ELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDE 158 (222)
T ss_pred CCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 9999999988654321 112234456777777 455544443 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||+|||+.++..+++.|++++++|+|||++||+++ ++...+|++++|+ .|+++..|+.
T Consensus 159 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 216 (222)
T cd03224 159 PSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLE-RGRVVLEGTA 216 (222)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEee-CCeEEEeCCH
Confidence 99999999999999999999777899999999976 4678899999998 4799888764
No 144
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.4e-37 Score=332.65 Aligned_cols=194 Identities=26% Similarity=0.342 Sum_probs=164.9
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCCCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 914 (1136)
+..+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.++
T Consensus 14 ~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 14 GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 3579999999999999999999999999999999999876 468999999987642 12456799999999988
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+|++||+.+....+. ......++.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||
T Consensus 92 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~lllLDE 163 (214)
T TIGR02673 92 PDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLSGGEQQRVAIARAIVNSPPLLLADE 163 (214)
T ss_pred cCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999988654321 122334456788999999976655443 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
||+|||+.++..+.+.|+++.++|+|||++||+++ ++...+|++++|++|
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 164 PTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999998777999999999986 566779999999853
No 145
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-37 Score=350.38 Aligned_cols=206 Identities=24% Similarity=0.368 Sum_probs=176.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC------CceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 221 (1136)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999876 9999999998765321 35799999999989
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||+||+.|.....+... .+...+++++++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998654322100 001224778899999988777655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999987643 456667889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988774
No 146
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-37 Score=354.70 Aligned_cols=206 Identities=21% Similarity=0.301 Sum_probs=178.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1136)
..+|+|+|+.+++|++++|+|||||||||||++|+|+..++ +|+|.++|.++....+ +|.++||+|++.+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35999999999999999999999999999999999999876 9999999998765433 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
.||+.|+.+..+... .+...+++++++.+||.+..+..+ ..
T Consensus 109 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~~-----~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRKP-----HQ 149 (377)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999999765332110 011234788999999988776654 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+|||||+.+|++|||||||++||..++.++.+.|+++.+..+ .+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999998876544 5666688999999999999999999999
Q ss_pred EEecChhhHH
Q 001154 387 VYQGPRVSVL 396 (1136)
Q Consensus 387 v~~G~~~~~~ 396 (1136)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 147
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-37 Score=337.35 Aligned_cols=201 Identities=28% Similarity=0.405 Sum_probs=171.0
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCc
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 569999999999999999999999999999999999876 468999999987542 234567999999999999999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS--LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~--~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
++||+.+...++. .......+.+.++++.+++.. ..+.. +..||||||||++|||||+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999987654331 222334456788999999975 44443 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999764 899999999986 46788999999984 789888874
No 148
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.8e-37 Score=338.94 Aligned_cols=204 Identities=27% Similarity=0.378 Sum_probs=171.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-----------hcccceEEEec
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----------ETFARISGYCE 908 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----------~~~~~~~gyv~ 908 (1136)
+++.+|+|+||+|++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~ 91 (250)
T PRK11264 14 HGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVF 91 (250)
T ss_pred CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccccccchhhHHHHhhhhEEEEe
Confidence 44579999999999999999999999999999999999876 468999999986532 22456799999
Q ss_pred cCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 001154 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1136)
Q Consensus 909 Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1136)
|++.+++..|++||+.+...... ........+.++++++.+++.+..+.. +..||||||||++|||||+.+|+
T Consensus 92 q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~Gq~qrv~la~al~~~p~ 164 (250)
T PRK11264 92 QNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY-----PRRLSGGQQQRVAIARALAMRPE 164 (250)
T ss_pred cCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----hhhCChHHHHHHHHHHHHhcCCC
Confidence 99999989999999987532111 122233445678899999997765543 35799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||||||+|||+.++..+++.|+++.++|.|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 165 lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 228 (250)
T PRK11264 165 VILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ-GRIVEQGPA 228 (250)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999877999999999976 46678999999985 789988874
No 149
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-37 Score=322.06 Aligned_cols=221 Identities=23% Similarity=0.354 Sum_probs=187.5
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCC----ceEEEEeccCCCC
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQV 221 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 221 (1136)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|.+++...++ .-++..+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3467999999999999999999999999999999999999987 99999999999877653 4578899999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
++|||.||+..++..+.. +.......+. .....+...+...+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~~~~-------------------~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGRPRA-------------------RKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhccccc-------------------hhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999988664421 0000000000 000112244688999999999999998875
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+. ++.+|+.+-|+.+-++.+||||++|
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~-~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDR-GGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhc-CCcEEEEEEeccHHHhhhccEEEec
Confidence 9999999999999999999999999999999999999999999999864 4577888999999999999999999
Q ss_pred cCCeEEEecChhhHHH
Q 001154 382 SEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~~ 397 (1136)
+.|+++..|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999863
No 150
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.2e-36 Score=330.98 Aligned_cols=206 Identities=38% Similarity=0.705 Sum_probs=171.0
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC-CceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcH
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT-GGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~-~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
.+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+.+|+|.++|.++....+++.++|++|++.+++.+|+
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv 98 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTV 98 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcH
Confidence 3679999999999999999999999999999999999764 123689999999877554567789999999999999999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHH-HHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEE-VMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~-~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
+||+.|......+...........+++ .++.+++.+..+..+ ..||+|||||++|||+|+.+|++|+|||||+|
T Consensus 99 ~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~illlDEP~~g 173 (226)
T cd03234 99 RETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGERRRVSIAVQLLWDPKVLILDEPTSG 173 (226)
T ss_pred HHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcC
Confidence 999998754332221112222233455 788888876665433 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 174 LD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 174 LDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999998777999999999974367889999999985 7888765
No 151
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-37 Score=316.28 Aligned_cols=205 Identities=26% Similarity=0.387 Sum_probs=172.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
.++|+|||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.+++...+ ++-++||||....|+.
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 67999999999999999999999999999999999998875 9999999999987765 3578999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhC-CcccccccccCc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-LDTCADTLVGDE 302 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lg-L~~~~dt~vg~~ 302 (1136)
|||.|||..++........ . ...++.+.+.|= |....+..-|
T Consensus 93 LTVeENL~~g~~~~~~~~~-----------------~------------------~~~~e~v~~lFP~Lker~~~~aG-- 135 (237)
T COG0410 93 LTVEENLLLGAYARRDKEA-----------------Q------------------ERDLEEVYELFPRLKERRNQRAG-- 135 (237)
T ss_pred CcHHHHHhhhhhccccccc-----------------c------------------cccHHHHHHHChhHHHHhcCccc--
Confidence 9999999986543211000 0 000334444442 4444555554
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
.|||||+|-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+.. +.+|+.+.|+...+.+++|+.++|.
T Consensus 136 ---~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~-g~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 136 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEG-GMTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ---CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcC-CcEEEEEeccHHHHHHhhCEEEEEe
Confidence 599999999999999999999999999999999999999999999998653 4678889999999999999999999
Q ss_pred CCeEEEecChhhHH
Q 001154 383 EGQIVYQGPRVSVL 396 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1136)
+|++++.|+.+++.
T Consensus 212 ~Griv~~G~~~eL~ 225 (237)
T COG0410 212 NGRIVLSGTAAELL 225 (237)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 152
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=8.6e-37 Score=340.59 Aligned_cols=204 Identities=19% Similarity=0.298 Sum_probs=171.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh------cccceEEEeccCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQNDIH 913 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~ 913 (1136)
+++.+|+||||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 95 (269)
T PRK11831 18 GNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGAL 95 (269)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccChhhHHHHhhcEEEEeccccc
Confidence 45679999999999999999999999999999999999876 4689999999875421 235679999999989
Q ss_pred CCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 914 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
++.+|+.||+.+...... .......++.+.++++.+++.+..+..+ ..||||||||++|||||+.+|++||||
T Consensus 96 ~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLD 168 (269)
T PRK11831 96 FTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SELSGGMARRAALARAIALEPDLIMFD 168 (269)
T ss_pred CCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 999999999987543211 1122333456778899999987666543 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+|||+.++..+.+.|+++.++ |+|||++||++. ++.+.+|++++|+ +|++++.|+.
T Consensus 169 EPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 228 (269)
T PRK11831 169 EPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVA-DKKIVAHGSA 228 (269)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999998765 899999999976 4677899999997 5799998875
No 153
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.6e-37 Score=331.34 Aligned_cols=201 Identities=27% Similarity=0.434 Sum_probs=164.2
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCC--CCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~l 917 (1136)
++..+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++. ..++.++|++|++.+. +.+
T Consensus 10 ~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~ 85 (213)
T cd03235 10 GGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPI 85 (213)
T ss_pred CCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCC
Confidence 44679999999999999999999999999999999999876 46899999998653 3456799999998763 347
Q ss_pred cHHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 918 TVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
|++||+.+....+.. .........+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||
T Consensus 86 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt 160 (213)
T cd03235 86 SVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPF 160 (213)
T ss_pred cHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 999999875432110 00111233456788999999976665543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 161 AGVDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 999999999999999999777999999999976 46678999999974 4 55544
No 154
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.2e-37 Score=330.68 Aligned_cols=194 Identities=27% Similarity=0.357 Sum_probs=165.3
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1136)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 569999999999999999999999999999999999876 468999999987542 124567999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.+|++||+.+....+. ....+..+.++++++.+++.+..+... .+||+|||||++|||||+.+|++|+||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988654332 223334456788999999977665543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
|+|||+.++..+.+.|+++.++|+|||++||+++ .+.+.+|++++|++ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999998777999999999976 46667999999985 54
No 155
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.2e-37 Score=338.69 Aligned_cols=206 Identities=27% Similarity=0.338 Sum_probs=169.9
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCCCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~ 914 (1136)
++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.++
T Consensus 14 ~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 14 GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 4579999999999999999999999999999999999876 468999999987532 12456799999999899
Q ss_pred CCCcHHHHHHHHhhhcC-----CCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 001154 915 PGLTVLESLLFSAWLRL-----PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~-----~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1136)
+.+|++||+.+...... .........++.+.++++.+++....+... ..||||||||++|||||+.+|++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~l 166 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA-----DQLSGGQQQRVAIARALAQQPDL 166 (243)
T ss_pred ccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999976421100 000111233456788999999976665543 57999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 990 VFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|.+ |++++.|+..
T Consensus 167 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 231 (243)
T TIGR02315 167 ILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAPS 231 (243)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCHH
Confidence 9999999999999999999999998754 899999999986 46678999999985 7898888753
No 156
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-37 Score=353.34 Aligned_cols=206 Identities=25% Similarity=0.388 Sum_probs=176.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1136)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 36999999999999999999999999999999999999876 9999999998765432 4679999999999999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.|+.+..+... .+...+++++++.+||++..++.+ ..
T Consensus 93 ~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KA 133 (369)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hh
Confidence 999998754322100 001234788899999988777655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 45666688999999999999999999999
Q ss_pred EEecChhhHH
Q 001154 387 VYQGPRVSVL 396 (1136)
Q Consensus 387 v~~G~~~~~~ 396 (1136)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999988774
No 157
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.1e-36 Score=348.15 Aligned_cols=206 Identities=28% Similarity=0.372 Sum_probs=177.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC--CCceEEEEeccCCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1136)
+.+|+|||++|++|++++|+||||||||||+++|+|.+.|+ +|+|.++|.++.... .++.+||++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999876 999999999875432 3467999999999899999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.|.....+... .+...+++.+++.+||++.+++.++
T Consensus 131 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----
Confidence 9999987544332100 0011236778899999988887765
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
+|||||||||+||+||+.+|++|+|||||+|||+.++.++++.|+++... +++|+.++|..+++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~--g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR--GKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 59999999999999999999999999999999999999999999998752 5567778899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001154 386 IVYQGPRVSVLD 397 (1136)
Q Consensus 386 iv~~G~~~~~~~ 397 (1136)
+++.|+.+++..
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999988764
No 158
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-37 Score=329.48 Aligned_cols=199 Identities=33% Similarity=0.488 Sum_probs=167.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1136)
++..+|+|+||++++| ++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 87 (211)
T cd03264 11 GKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNF 87 (211)
T ss_pred CCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccC
Confidence 4457999999999999 999999999999999999999876 468999999987543 23456799999999999999
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|+.||+.+....+. ....+..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 88 tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~ 159 (211)
T cd03264 88 TVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRRRVGIAQALVGDPSILIVDEPTA 159 (211)
T ss_pred CHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999988654432 122333456788999999987666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
|||+.++..+.+.|+++++ +.|||++||+++ .+.+.+|++++|++ |++++.|
T Consensus 160 ~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 160 GLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred cCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 9999999999999999875 699999999976 46677999999985 7887654
No 159
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6e-37 Score=329.98 Aligned_cols=193 Identities=28% Similarity=0.393 Sum_probs=162.0
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCC-CCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1136)
+.+|+|+||+|++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 679999999999999999999999999999999999876 468999999986532 234567999999974 35678
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|++||+.+....+. .......+.++++++.+++.+..+... ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENLG---LPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987543221 122333456788999999976655543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
|||+.++..+++.|++++++|+|||++||+++ ++...+|++++|.+|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999976 466679999999853
No 160
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-37 Score=309.37 Aligned_cols=207 Identities=26% Similarity=0.397 Sum_probs=176.8
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1136)
.++.+|++||++++|||++||+|||||||||||+.|+|... +.+|++.++|.+... ....+..+..||+..+...
T Consensus 12 ~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFp 89 (259)
T COG4559 12 AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFP 89 (259)
T ss_pred ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChhhCCHHHHHHHhhhcccCcccccc
Confidence 56889999999999999999999999999999999999876 458999999998654 4456777999999888778
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhh------CCCEE
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA------NPSIV 990 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~------~p~il 990 (1136)
.||+|-+.++..-... .-...+..+.++++|...++..++.... ..|||||||||.+||.|+. ++++|
T Consensus 90 Ftv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGEqQRVqlARvLaQl~~~v~~~r~L 163 (259)
T COG4559 90 FTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGEQQRVQLARVLAQLWPPVPSGRWL 163 (259)
T ss_pred eEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchHHHHHHHHHHHHHccCCCCCCceE
Confidence 8999999987532211 1112244566889999999999887654 4799999999999999975 34689
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
|||||||.||...+..++++.|+++++|..|+++-||.+. ...++|++++|. +|+++..|++.+
T Consensus 164 ~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~-~Grv~a~g~p~~ 227 (259)
T COG4559 164 FLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLH-QGRVIASGSPQD 227 (259)
T ss_pred EecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeee-CCeEeecCCHHH
Confidence 9999999999999999999999999999999999999985 678899999998 589999998754
No 161
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.3e-36 Score=332.91 Aligned_cols=202 Identities=27% Similarity=0.414 Sum_probs=169.3
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1136)
+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ....+.++|++|++.+++.+
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~ 89 (236)
T TIGR03864 12 GARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDL 89 (236)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccC
Confidence 45679999999999999999999999999999999999876 468999999987532 12235799999999888899
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|++||+.+....+. .......+.++++++.+++.+..+... ..||||||||++|||||+.+|+||+|||||+
T Consensus 90 t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~~ 161 (236)
T TIGR03864 90 SVRQNLRYHAALHG---LSRAEARERIAALLARLGLAERADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPTV 161 (236)
T ss_pred cHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987654331 222334456788999999977665543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+.+.|+++++ +|+|||++||+++. + +.+|++++|++ |++++.|+.
T Consensus 162 ~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~~ 216 (236)
T TIGR03864 162 GLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGAA 216 (236)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCCH
Confidence 9999999999999999875 58999999999863 4 45999999984 788888764
No 162
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=7.3e-36 Score=365.36 Aligned_cols=214 Identities=27% Similarity=0.416 Sum_probs=175.2
Q ss_pred ccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcC
Q 001154 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1136)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 892 (1136)
-+..+.++|++|.++. .+..+|+|+|++|+|||.+||+|+||||||||+|+|+|+.. +.+|+|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECC
Confidence 3457889999887742 33479999999999999999999999999999999999877 5799999999
Q ss_pred ccCC---hhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-------ccccccc
Q 001154 893 YPKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-------LSGALIG 962 (1136)
Q Consensus 893 ~~~~---~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-------~~~~~~~ 962 (1136)
+++. ...+|+.+|||+|++.++. -|++||+.++. | +.+. +.+.++++..+..+ -.++.++
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~----p-~~~~----e~i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN----P-EATD----EEIIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC----C-CCCH----HHHHHHHHHhCcHHHHHhcccccccccc
Confidence 9864 4668999999999998885 49999998753 2 2221 22333344333322 2234444
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEE
Q 001154 963 LPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1136)
Q Consensus 963 ~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l 1042 (1136)
.. +.+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.++. +|+|+|+++|+++ .++.+|+++||
T Consensus 605 E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl 680 (709)
T COG2274 605 EG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVL 680 (709)
T ss_pred cC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEc
Confidence 43 45799999999999999999999999999999999999999999999975 5899999999975 67899999999
Q ss_pred ecCcEEEEeCCC
Q 001154 1043 KRGGELIYAGPL 1054 (1136)
Q Consensus 1043 ~~gG~~~~~g~~ 1054 (1136)
+ +|+++..|+.
T Consensus 681 ~-~Gkiv~~gs~ 691 (709)
T COG2274 681 D-QGKIVEQGSH 691 (709)
T ss_pred c-CCceeccCCH
Confidence 8 5899999985
No 163
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=9.7e-37 Score=330.91 Aligned_cols=197 Identities=26% Similarity=0.323 Sum_probs=166.4
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---h---cccceEEEeccCCCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---E---TFARISGYCEQNDIHS 914 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~~~~~~gyv~Q~~~~~ 914 (1136)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. . .+++.++|++|++.++
T Consensus 14 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 14 GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 3579999999999999999999999999999999999876 468999999987532 1 2456799999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+|++||+.+....+. ....+..+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||
T Consensus 92 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 163 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAG---ASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLSGGEQQRVGIARAVVNKPAVLLADE 163 (222)
T ss_pred ccccHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 89999999988654331 223334456788999999877665543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1049 (1136)
||+|||+.++..+.+.|+++.++|.|||++||+++ ++...+|++++|++ |+++
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 164 PTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 99999999999999999998777899999999986 46677899999985 6654
No 164
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.9e-38 Score=311.67 Aligned_cols=209 Identities=20% Similarity=0.350 Sum_probs=181.1
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCC----ceEEEEeccCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPP----RTSAYVSQQDWQVA 222 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 222 (1136)
++++++|||+.+++||+++|+|||||||||.+.++.|+..++ +|+|.++|.+++..... .-+||+||++..|-
T Consensus 16 kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 16 KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 357999999999999999999999999999999999999987 99999999999877643 35899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
.+||+|||.-..+.+....+ . .+.+.+.+.+|+.|+|.++++..-
T Consensus 93 ~LtV~dNi~~vlE~~~~d~~--------~------------------------~~~~~~l~~LL~ef~i~hlr~~~a--- 137 (243)
T COG1137 93 KLTVEDNIMAVLEIREKDLK--------K------------------------AERKEELDALLEEFHITHLRDSKA--- 137 (243)
T ss_pred cCcHHHHHHHHHhhhhcchh--------H------------------------HHHHHHHHHHHHHhchHHHhcCcc---
Confidence 99999999876554321100 0 011334789999999999998754
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
-.||||||+|+-|||||+.+|+.++||||++|+||-+..+|.+.++.+... +.-|++.-|+..|+..+|||.++++
T Consensus 138 --~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~r--giGvLITDHNVREtL~i~dRaYIi~ 213 (243)
T COG1137 138 --YSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDR--GIGVLITDHNVRETLDICDRAYIIS 213 (243)
T ss_pred --cccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhC--CceEEEccccHHHHHhhhheEEEEe
Confidence 369999999999999999999999999999999999999999999999763 5556667899999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 001154 383 EGQIVYQGPRVSVLD 397 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1136)
+|++..+|+++++.+
T Consensus 214 ~G~vla~G~p~ei~~ 228 (243)
T COG1137 214 DGKVLAEGSPEEIVN 228 (243)
T ss_pred cCeEEecCCHHHHhc
Confidence 999999999998753
No 165
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=334.88 Aligned_cols=204 Identities=25% Similarity=0.360 Sum_probs=172.1
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T PRK10895 14 KGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFR 91 (241)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHHhCeEEeccCCcccc
Confidence 45679999999999999999999999999999999999876 468999999987642 123567999999998888
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.+|++||+.+....+. .....+.+..++++++.+++.+..+... ..||||||||++|||||+.+|++|+||||
T Consensus 92 ~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 164 (241)
T PRK10895 92 RLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGGERRRVEIARALAANPKFILLDEP 164 (241)
T ss_pred cCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 8999999987543221 1222334456788999999876655433 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+|||+.++..+.+.++.++++|.|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 221 (241)
T PRK10895 165 FAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVS-QGHLIAHGTP 221 (241)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEe-CCeEEeeCCH
Confidence 9999999999999999998777999999999975 5778899999997 4789988875
No 166
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=340.44 Aligned_cols=201 Identities=25% Similarity=0.324 Sum_probs=170.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCC-CCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1136)
..+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 469999999999999999999999999999999999876 468999999987643 234567999999863 44568
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
||.||+.|..... ........+.+.++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 96 tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~ 167 (274)
T PRK13647 96 TVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMA 167 (274)
T ss_pred cHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 9999998864322 2233344456789999999987766543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 168 ~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 222 (274)
T PRK13647 168 YLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLK-EGRVLAEGDK 222 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999877999999999976 4667899999997 5799998875
No 167
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=343.17 Aligned_cols=201 Identities=25% Similarity=0.321 Sum_probs=169.0
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccCCC-C
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 913 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~-~ 913 (1136)
..+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|+++.. ..+++.+|||+|++. .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQ 97 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhh
Confidence 469999999999999999999999999999999999876 468999999987631 234567999999862 2
Q ss_pred CCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 914 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
+...||+||+.|+.... .....+..+.++++++.++|. ...+.. +..|||||||||+|||||+.+|++|||
T Consensus 98 l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~lAraL~~~P~llll 169 (290)
T PRK13634 98 LFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PFELSGGQMRRVAIAGVLAMEPEVLVL 169 (290)
T ss_pred hhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33579999999875332 123344446788999999996 555543 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 170 DEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~-~G~i~~~g~~ 230 (290)
T PRK13634 170 DEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMH-KGTVFLQGTP 230 (290)
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999764 999999999986 5778899999998 5899999875
No 168
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=344.03 Aligned_cols=202 Identities=25% Similarity=0.335 Sum_probs=169.5
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCC-------------------------
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR------------------------- 896 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~------------------------- 896 (1136)
..+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|+++|.+..
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKI 97 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceeccccccccccccccccccccccccccc
Confidence 359999999999999999999999999999999999876 45799999986531
Q ss_pred --hhcccceEEEeccCC-CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHH
Q 001154 897 --QETFARISGYCEQND-IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTE 972 (1136)
Q Consensus 897 --~~~~~~~~gyv~Q~~-~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgG 972 (1136)
....++.+|||+|++ ..+...||+||+.|+.... ....++..+.+.++++.++|. +..+.. +..||||
T Consensus 98 ~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgG 169 (305)
T PRK13651 98 KKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYIELVGLDESYLQRS-----PFELSGG 169 (305)
T ss_pred chHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hhhCCHH
Confidence 123467799999985 3344579999999865432 233445556788999999996 566554 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 973 qrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
||||++||++|+.+|++|||||||+|||+.++..+++.|+++++.|.|||++||+++ .+.+.+|++++|++ |++++.|
T Consensus 170 qkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~-~~~~~adrv~vl~~-G~i~~~g 247 (305)
T PRK13651 170 QKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLD-NVLEWTKRTIFFKD-GKIIKDG 247 (305)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999976 47788999999975 7999998
Q ss_pred CCC
Q 001154 1053 PLG 1055 (1136)
Q Consensus 1053 ~~~ 1055 (1136)
+..
T Consensus 248 ~~~ 250 (305)
T PRK13651 248 DTY 250 (305)
T ss_pred CHH
Confidence 753
No 169
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2e-36 Score=328.66 Aligned_cols=199 Identities=25% Similarity=0.376 Sum_probs=170.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcH
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|+
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~ 87 (223)
T TIGR03740 11 GKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTA 87 (223)
T ss_pred CCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCH
Confidence 44679999999999999999999999999999999999876 56899999998764322 2578999999988888999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+||+.+....+. .. ...+.++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||+||
T Consensus 88 ~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~L 155 (223)
T TIGR03740 88 RENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGL 155 (223)
T ss_pred HHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCC
Confidence 999987654331 11 234678899999987666543 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|++ |++++.|+..
T Consensus 156 D~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 156 DPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 999999999999999777999999999986 46788999999984 7999998864
No 170
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.8e-37 Score=328.88 Aligned_cols=197 Identities=26% Similarity=0.370 Sum_probs=166.2
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-----hcccceEEEeccCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~ 914 (1136)
++..+|+++||++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.++
T Consensus 11 ~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (213)
T cd03262 11 GDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLF 88 (213)
T ss_pred CCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccC
Confidence 44679999999999999999999999999999999999876 468999999987631 23467899999999999
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+|++||+.+...... .....+..+.++++++.+++.+..+..+ ..||+|||||++||+||+.+|++|+|||
T Consensus 89 ~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDE 161 (213)
T cd03262 89 PHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMNPKVMLFDE 161 (213)
T ss_pred CCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999987542111 1222334456788999999977665543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+
T Consensus 162 P~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 162 PTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred CccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999877999999999976 46678999999985 44
No 171
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-36 Score=331.44 Aligned_cols=200 Identities=25% Similarity=0.309 Sum_probs=162.7
Q ss_pred EEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCC--CCC
Q 001154 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--IHS 914 (1136)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~ 914 (1136)
.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++ .+.
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999876 468999999987643 23456899999998 466
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
+.+|++||+.+......+. .........++++++.+++. ...+.. +..||||||||++|||||+.+|+||+||
T Consensus 97 ~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 7899999998764433211 11111122235788888884 444443 3479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
|||+|||+.++..+.+.|++++++ |+|||++||+++ .+...+|++++|++ |+++..|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-GKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-CEEEecC
Confidence 999999999999999999999765 899999999976 46668999999984 7887654
No 172
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=335.10 Aligned_cols=203 Identities=22% Similarity=0.315 Sum_probs=171.0
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----------------hcccce
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARI 903 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~ 903 (1136)
+++.+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (257)
T PRK10619 16 GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTR 93 (257)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccccccccccccccchHHHHHhhc
Confidence 34679999999999999999999999999999999999876 468999999976531 234567
Q ss_pred EEEeccCCCCCCCCcHHHHHHHHhh-hcCCCcccHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCCHHHHHHHHHHH
Q 001154 904 SGYCEQNDIHSPGLTVLESLLFSAW-LRLPSEIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAV 981 (1136)
Q Consensus 904 ~gyv~Q~~~~~~~ltv~e~l~~~~~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-~~~~~~~~~~~LSgGqrqrl~ia~ 981 (1136)
++|++|++.+++.+|++||+.+... .. ........+.+.++++.+++.+.. +.. +..||||||||++|||
T Consensus 94 i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~G~~qrv~lar 165 (257)
T PRK10619 94 LTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQGKY-----PVHLSGGQQQRVSIAR 165 (257)
T ss_pred eEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHH
Confidence 9999999999999999999987532 21 122334456678899999997653 432 3579999999999999
Q ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 982 ELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 982 aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+...||++++|++ |++++.|+.
T Consensus 166 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 166 ALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSHVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999877999999999976 46667999999985 789988874
No 173
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.9e-36 Score=328.50 Aligned_cols=195 Identities=27% Similarity=0.395 Sum_probs=163.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c---cc-ceEEEeccCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T---FA-RISGYCEQNDIHS 914 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~---~~-~~~gyv~Q~~~~~ 914 (1136)
+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... . ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 579999999999999999999999999999999999876 4689999999875321 1 22 5699999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+|++||+.+....+. ....+..+.+.++++.+++.+..+... ..||||||||++|||+|+.+|+||||||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999988654331 122233456788999999977666543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEE
Q 001154 995 PTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELI 1049 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~ 1049 (1136)
||+|||+.++..+.+.|+++++ .|+|||++||+++ .+ +.+|++++|++ |+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEec
Confidence 9999999999999999999975 4899999999976 34 55899999985 6654
No 174
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-37 Score=364.07 Aligned_cols=216 Identities=25% Similarity=0.426 Sum_probs=179.1
Q ss_pred cceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCc
Q 001154 814 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 893 (1136)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 893 (1136)
.-.+.|+||++.++.. ++.++|+|+||+|+|||.+|||||||+||||+.++|-.... |.+|+|.+||+
T Consensus 463 ~G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCe
Confidence 3468999999988653 46789999999999999999999999999999999998766 67999999999
Q ss_pred cCCh---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHH-----HHHHHHHHHcCCCccccccccCCC
Q 001154 894 PKRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQR-----AFVEEVMELVELTSLSGALIGLPG 965 (1136)
Q Consensus 894 ~~~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~-----~~v~~~l~~l~l~~~~~~~~~~~~ 965 (1136)
|+++ ..+++.+|+|.|+|.+|.. |++||+.|+.. +.+.++.. +.+.+.+. ++.+-.|+.+|..|
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs~-sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~--~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFSG-SIRENIAYGLD-----NATDEEIEAAAKMANAHEFIT--NFPDGYNTVVGEKG 602 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeecc-cHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHH--hCccccccccCCcc
Confidence 9754 5578899999999999965 99999999753 22222221 11222222 34455677787655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
..||||||||++|||||++||.||||||+||+||+++...|+++|.++. +++|||+|+|+.+ ..+.+|+|+|+++
T Consensus 603 -~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~-~~rTVlvIAHRLS--TV~~Ad~Ivvi~~- 677 (716)
T KOG0058|consen 603 -SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLM-QGRTVLVIAHRLS--TVRHADQIVVIDK- 677 (716)
T ss_pred -ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhh-cCCeEEEEehhhh--HhhhccEEEEEcC-
Confidence 4799999999999999999999999999999999999999999999876 4699999999965 6789999999985
Q ss_pred cEEEEeCCC
Q 001154 1046 GELIYAGPL 1054 (1136)
Q Consensus 1046 G~~~~~g~~ 1054 (1136)
|+++..|..
T Consensus 678 G~V~E~G~h 686 (716)
T KOG0058|consen 678 GRVVEMGTH 686 (716)
T ss_pred CeEEecccH
Confidence 899999964
No 175
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-35 Score=339.22 Aligned_cols=214 Identities=28% Similarity=0.480 Sum_probs=177.7
Q ss_pred ccceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcC
Q 001154 813 QPLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG 892 (1136)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 892 (1136)
.+..+..+|+++.++ +++++++|+|+++++|+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 345555667776653 23389999999999999999999999999999999999887 4689999999
Q ss_pred ccCC---hhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccc------cccC
Q 001154 893 YPKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA------LIGL 963 (1136)
Q Consensus 893 ~~~~---~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~------~~~~ 963 (1136)
.+.. ...+++.++||+|++.++++ |++||+.++. + +. .++.+.++++..++.+..+. .+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~----~-~~----s~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLAR----P-DA----SDEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccC----C-cC----CHHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 46788999999999999875 9999998752 1 11 23446778888887765543 3443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 001154 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1136)
Q Consensus 964 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~ 1043 (1136)
+..+|||||+|||++||||+.+++++++||||++||.++.+.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 3568999999999999999999999999999999999999999999999875 699999999964 567889999997
Q ss_pred cCcEEEEeCCCC
Q 001154 1044 RGGELIYAGPLG 1055 (1136)
Q Consensus 1044 ~gG~~~~~g~~~ 1055 (1136)
+|+++..|...
T Consensus 529 -~G~l~~~g~~~ 539 (559)
T COG4988 529 -NGRLVEQGTHE 539 (559)
T ss_pred -CCceeccCCHH
Confidence 58999998753
No 176
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=335.78 Aligned_cols=207 Identities=23% Similarity=0.257 Sum_probs=170.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c-ccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~ 915 (1136)
++..+|+|+||++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.++... . .+..++|++|++.+++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (255)
T PRK11300 16 GGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFR 93 (255)
T ss_pred CCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEECCCCCHHHHHhcCeEEeccCcccCC
Confidence 45679999999999999999999999999999999999876 4689999999876431 1 2345899999999999
Q ss_pred CCcHHHHHHHHhhhcCC----------C--cccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHH
Q 001154 916 GLTVLESLLFSAWLRLP----------S--EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVEL 983 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~----------~--~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL 983 (1136)
.+|++||+.+....... . .....+..+.++++++.+++.+..+... ..||||||||++||+||
T Consensus 94 ~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al 168 (255)
T PRK11300 94 EMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQA-----GNLAYGQQRRLEIARCM 168 (255)
T ss_pred CCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCCh-----hhCCHHHHHHHHHHHHH
Confidence 99999999885421100 0 0011123345778889999877666543 47999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 984 VANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 984 ~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+..
T Consensus 169 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~~ 239 (255)
T PRK11300 169 VTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDRIYVVN-QGTPLANGTPE 239 (255)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEecCCHH
Confidence 9999999999999999999999999999999765 899999999976 5678899999998 47999988753
No 177
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=334.66 Aligned_cols=195 Identities=22% Similarity=0.313 Sum_probs=166.8
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcH
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+++.+||
T Consensus 23 ~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~l~~~~tv 98 (257)
T PRK11247 23 GERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPLA--EAREDTRLMFQDARLLPWKKV 98 (257)
T ss_pred CCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEHH--HhhCceEEEecCccCCCCCcH
Confidence 34579999999999999999999999999999999999876 46899999997643 345679999999988888999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+||+.+.. + . ..+..+.++++.+++.+..+... ..||||||||++|||+|+.+|++|||||||+||
T Consensus 99 ~enl~~~~--~---~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkqrl~laraL~~~p~lllLDEPt~~L 164 (257)
T PRK11247 99 IDNVGLGL--K---G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQRVALARALIHRPGLLLLDEPLGAL 164 (257)
T ss_pred HHHHHhcc--c---c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 99998742 1 0 11345778999999987665543 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1000 DARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+.++..+.+.|+++.+ .|+|||++||+++ .+...+|++++|.+ |++++.|+.
T Consensus 165 D~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 165 DALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999865 5899999999976 46678999999985 789888765
No 178
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=340.53 Aligned_cols=201 Identities=25% Similarity=0.316 Sum_probs=169.1
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccCCC-C
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDI-H 913 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~-~ 913 (1136)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQ 97 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhceEEEEeChhhh
Confidence 469999999999999999999999999999999999877 468999999987532 234567999999863 2
Q ss_pred CCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 914 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
+..+|+.||+.|....+. ....+..+.++++++.+++. +..+..+ ..||||||||++|||||+.+|++|||
T Consensus 98 ~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lLlL 169 (287)
T PRK13641 98 LFENTVLKDVEFGPKNFG---FSEDEAKEKALKWLKKVGLSEDLISKSP-----FELSGGQMRRVAIAGVMAYEPEILCL 169 (287)
T ss_pred hccchHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 335799999987643321 22344455688999999996 5655543 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||+|||+.++..+.+.|+++.++|.|||++||+++ .+.+.||++++|++ |++++.|+.
T Consensus 170 DEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 229 (287)
T PRK13641 170 DEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GKLIKHASP 229 (287)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999777999999999976 47788999999985 799998875
No 179
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.5e-36 Score=333.03 Aligned_cols=204 Identities=27% Similarity=0.342 Sum_probs=169.0
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
++..+|+|+||+|++||++||+|+||||||||+++|+|..++. +.+|+|.++|.++.. ...++.+||++|++
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 91 (247)
T TIGR00972 12 GEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKP 91 (247)
T ss_pred CCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCc
Confidence 4457999999999999999999999999999999999987531 128999999987642 23456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC----ccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT----SLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~----~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1136)
.+++ .|++||+.+....+. .....+..+.++++++.+++. +..+.. +..||||||||++|||||+.+|
T Consensus 92 ~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p 163 (247)
T TIGR00972 92 NPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS-----ALGLSGGQQQRLCIARALAVEP 163 (247)
T ss_pred ccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC-----cccCCHHHHHHHHHHHHHhcCC
Confidence 8888 999999988654331 112233445678899999997 444432 3579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (247)
T TIGR00972 164 EVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD-GELVEYGPT 227 (247)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999876 589999999976 46778999999985 789888874
No 180
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-36 Score=326.36 Aligned_cols=200 Identities=31% Similarity=0.433 Sum_probs=168.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-CCceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 226 (1136)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999998776 999999998875432 24579999999888889999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.++....+... ......++.+++.+||++..++.++ .
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (213)
T cd03259 90 AENIAFGLKLRGVPK----------------------------------AEIRARVRELLELVGLEGLLNRYPH-----E 130 (213)
T ss_pred HHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 999987643211000 0011236778999999877776554 5
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987532 45666788999999999999999999999
Q ss_pred EEec
Q 001154 387 VYQG 390 (1136)
Q Consensus 387 v~~G 390 (1136)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 181
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=340.67 Aligned_cols=200 Identities=22% Similarity=0.344 Sum_probs=168.6
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccCC--C
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~--~ 912 (1136)
+.+|+||||+|++||++||+||||||||||+++|+|... +..|+|.++|.++.. ..+++.+|||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQ 97 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhheEEEecChHhc
Confidence 469999999999999999999999999999999999876 468999999987632 23567899999986 3
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
+++ .|+.||+.|..... .....+..+.+.++++.++|. +..+.. +..||||||||++|||||+.+|+||+
T Consensus 98 l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LSgGq~qrv~laraL~~~p~ill 168 (286)
T PRK13646 98 LFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----PFQMSGGQMRKIAIVSILAMNPDIIV 168 (286)
T ss_pred cch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 444 59999999864332 123344456788999999996 555543 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 169 lDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~-~G~i~~~g~~ 230 (286)
T PRK13646 169 LDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMK-EGSIVSQTSP 230 (286)
T ss_pred EECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999975 4999999999976 4667899999998 5799999875
No 182
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=339.24 Aligned_cols=203 Identities=26% Similarity=0.354 Sum_probs=171.0
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCC-----hhcccceEEEeccCCC-CC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR-----QETFARISGYCEQNDI-HS 914 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~~~-~~ 914 (1136)
++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++. ...+++.+||++|++. .+
T Consensus 18 ~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 18 GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 3569999999999999999999999999999999999876 46899999998763 1235677999999874 23
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
...|++||+.+..... ..+..+..+.++++++.++|.+..+... ..||||||||++|||||+.+|+||+|||
T Consensus 96 ~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrl~laraL~~~p~lLilDE 167 (283)
T PRK13636 96 FSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCLSFGQKKRVAIAGVLVMEPKVLVLDE 167 (283)
T ss_pred ccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4579999998864322 1233444566889999999987766543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||+|||+.++..+++.|++++++ |+|||++||+++ ++...||++++|++ |++++.|+..
T Consensus 168 Pt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i~~~g~~~ 227 (283)
T PRK13636 168 PTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRVILQGNPK 227 (283)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999765 999999999976 46668999999985 7999999863
No 183
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=339.92 Aligned_cols=201 Identities=27% Similarity=0.359 Sum_probs=169.7
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccCC--C
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~--~ 912 (1136)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|+++|.++.. ..+++.+|||+|++ .
T Consensus 19 ~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 19 SRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 359999999999999999999999999999999999876 468999999987631 23567899999986 4
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
+++ .||.|++.|..... ..+..+.++.+.++++.++|. ...+.. +..||||||||++|||+|+.+|+|||
T Consensus 97 l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~~LSgGqkqrvaiA~aL~~~p~ill 167 (288)
T PRK13643 97 LFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PFELSGGQMRRVAIAGILAMEPEVLV 167 (288)
T ss_pred ccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 444 69999999875432 123344556788999999995 354443 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|+ +|++++.|+..
T Consensus 168 LDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~-~G~i~~~g~~~ 229 (288)
T PRK13643 168 LDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLE-KGHIISCGTPS 229 (288)
T ss_pred EECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 99999999999999999999999877999999999976 4667899999998 58999999753
No 184
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=349.82 Aligned_cols=204 Identities=24% Similarity=0.298 Sum_probs=174.6
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c----ccceEEEeccCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T----FARISGYCEQND 911 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~ 911 (1136)
++...+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++... . .++.+||++|++
T Consensus 38 ~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~ 115 (400)
T PRK10070 38 TGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSF 115 (400)
T ss_pred cCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCC
Confidence 355678999999999999999999999999999999999876 4689999999876421 1 235799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++.+||+||+.|....+. ....+..+.+.++++.++|.+..+... ..|||||||||+|||||+.+|+|||
T Consensus 116 ~l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLL 187 (400)
T PRK10070 116 ALMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILL 187 (400)
T ss_pred cCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999998764432 223344566889999999987776543 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 188 LDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 188 MDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred EECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 9999999999999999999999875 5899999999986 57788999999984 799988875
No 185
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=343.40 Aligned_cols=218 Identities=22% Similarity=0.317 Sum_probs=176.7
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.++|+++.++.. ......+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 36777777665310 0012469999999999999999999999999999999999876 4689999999765
Q ss_pred Ch-------------------hcccceEEEeccCC--CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC
Q 001154 896 RQ-------------------ETFARISGYCEQND--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT 954 (1136)
Q Consensus 896 ~~-------------------~~~~~~~gyv~Q~~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~ 954 (1136)
.. ..+++.+|||+|++ .+++ .|++||+.|+.... .....+..+.+.++++.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23467899999986 3554 59999998864322 123344455678899999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHH
Q 001154 955 -SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIF 1033 (1136)
Q Consensus 955 -~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~ 1033 (1136)
...+.. +.+||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++|+|||++||+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455443 3579999999999999999999999999999999999999999999998777999999999976 466
Q ss_pred HhcCEEEEEecCcEEEEeCCC
Q 001154 1034 ESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1034 ~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999985 799999975
No 186
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-36 Score=327.19 Aligned_cols=204 Identities=29% Similarity=0.375 Sum_probs=172.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC--CCCceEEEEeccCCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 225 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999998776 99999999876432 12357999999998899999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.+.....+... .+...+++.+++.+||++..++.++
T Consensus 90 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 130 (220)
T cd03265 90 GWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLVK----- 130 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCChh-----
Confidence 9999988643321100 0012247788999999887776654
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++..++|++++|.+|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEF-GMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 599999999999999999999999999999999999999999999987532 4566778899999999999999999999
Q ss_pred EEEecChhh
Q 001154 386 IVYQGPRVS 394 (1136)
Q Consensus 386 iv~~G~~~~ 394 (1136)
++..|+.++
T Consensus 210 i~~~~~~~~ 218 (220)
T cd03265 210 IIAEGTPEE 218 (220)
T ss_pred EEEeCChHH
Confidence 999988765
No 187
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=338.31 Aligned_cols=218 Identities=27% Similarity=0.393 Sum_probs=177.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-----CCceEEEEeccCC-CC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 221 (1136)
+++|+|||++|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999876 999999999876432 2467999999863 34
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc--ccccccc
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD--TCADTLV 299 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~--~~~dt~v 299 (1136)
..+||+||+.|.....+.. + .+...+++++++.+||. +..|+.
T Consensus 97 ~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~- 141 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS-E---------------------------------EEIENRVKRAMNIVGLDYEDYKDKS- 141 (287)
T ss_pred ccccHHHHHHhHHHHCCCC-H---------------------------------HHHHHHHHHHHHHcCCCchhhccCC-
Confidence 4689999998864322110 0 01123478899999997 455554
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
++.||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+++|+.++|+..++..+||+|+
T Consensus 142 ----~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 142 ----PFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999998764 35667778899999999999999
Q ss_pred EEcCCeEEEecChhhHHH---HHHhcCCCCCC
Q 001154 380 LLSEGQIVYQGPRVSVLD---FFASMGFSCPK 408 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~ 408 (1136)
+|++|++++.|+.+++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23344555544
No 188
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=331.05 Aligned_cols=203 Identities=26% Similarity=0.347 Sum_probs=170.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCC---------hhcccceEEEeccC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---------QETFARISGYCEQN 910 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---------~~~~~~~~gyv~Q~ 910 (1136)
+++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++. ....++.++|++|+
T Consensus 13 ~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 90 (242)
T PRK11124 13 GAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQ 90 (242)
T ss_pred CCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecccccccchhhHHHHHhheEEEecC
Confidence 44579999999999999999999999999999999999876 46899999998642 12345679999999
Q ss_pred CCCCCCCcHHHHHHHH-hhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 001154 911 DIHSPGLTVLESLLFS-AWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~-~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1136)
+.+++.+|+.||+.+. ..... ....+..+.+.++++.+++....+... ..||||||||++|||||+.+|++
T Consensus 91 ~~~~~~~tv~e~i~~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~l 162 (242)
T PRK11124 91 YNLWPHLTVQQNLIEAPCRVLG---LSKDQALARAEKLLERLRLKPYADRFP-----LHLSGGQQQRVAIARALMMEPQV 162 (242)
T ss_pred ccccCCCcHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999753 22211 122333456788999999977666543 47999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 163 lilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 225 (242)
T PRK11124 163 LLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYME-NGHIVEQGDA 225 (242)
T ss_pred EEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999998777999999999986 4667799999998 4799988875
No 189
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-36 Score=336.14 Aligned_cols=224 Identities=27% Similarity=0.363 Sum_probs=180.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-------CCCceEEEEeccC-CC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQD-WQ 220 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 220 (1136)
.+|+|||++|++|++++|+||||||||||+++|+|.++|. +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999876 99999999987421 1245799999986 23
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLV 299 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~v 299 (1136)
+...||.||+.|+....+... .+...++.++++.+||. ...++.
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~- 141 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEKS- 141 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccCC-
Confidence 445799999998754322100 00122477889999996 345544
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+. +.+|+.++|+..++.++||+|+
T Consensus 142 ----~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~--g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 142 ----PFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQS--GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ----cccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHHHHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999988652 5567778899999999999999
Q ss_pred EEcCCeEEEecChhhHH---HHHHhcCCCCCCCCChHHHH
Q 001154 380 LLSEGQIVYQGPRVSVL---DFFASMGFSCPKRKNVADFL 416 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~---~~F~~~Gf~cp~~~~~adfl 416 (1136)
+|++|+++++|+++++. +++...|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999998874 34556677776654444433
No 190
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.6e-36 Score=341.05 Aligned_cols=206 Identities=29% Similarity=0.382 Sum_probs=174.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC--CCceEEEEeccCCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1136)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 35999999999999999999999999999999999998876 999999998764321 2467999999998899999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.+.....+... .....+++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh-----
Confidence 9999987543221100 0001236678899999988877664
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR--GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC--CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 59999999999999999999999999999999999999999999998653 5567778899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001154 386 IVYQGPRVSVLD 397 (1136)
Q Consensus 386 iv~~G~~~~~~~ 397 (1136)
+++.|+.+++..
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988753
No 191
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-36 Score=342.75 Aligned_cols=229 Identities=25% Similarity=0.394 Sum_probs=185.7
Q ss_pred cCCCCCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeeeeceeEEEeCCeEEEEEcCCCC
Q 001154 93 VDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPPSS 172 (1136)
Q Consensus 93 ~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 172 (1136)
..+..|.=.|+|+|++.+-. ++++||+++||+|+.|+-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 45666777899999886531 234599999999999999999999999
Q ss_pred ChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHH
Q 001154 173 GKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITEL 249 (1136)
Q Consensus 173 GKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 249 (1136)
||||+|++|.+.++ + +|+|.+||.++.+... ++.||||||+..+|.+ ||.+||.++.. ...++.+.+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn~----sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGNP----SASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCCC----CcCHHHHHHH
Confidence 99999999999987 4 9999999999877653 6789999999987765 99999998632 2233444444
Q ss_pred HHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeE
Q 001154 250 ARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLF 329 (1136)
Q Consensus 250 ~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vll 329 (1136)
|++. ++ -| + ...|++.++|.||+++. -|||||||||++|||++.+|+|++
T Consensus 461 ~k~a---~~-----------------------hd-~--i~~l~~GY~T~VGerG~-~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRA---GL-----------------------HD-V--ISRLPDGYQTLVGERGL-MLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHc---Cc-----------------------HH-H--HHhccccchhhHhhccc-ccccchHHHHHHHHHHhcCCCeEE
Confidence 5432 11 11 1 23478899999998765 599999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHH
Q 001154 330 MDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 330 lDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 397 (1136)
+|||||+||+.|..+|++.+.... ++.|+|.+.|.. .+..-||+|++|++|++...|+.++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~---~~rTvI~IvH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVM---SGRTVIMIVHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhc---CCCeEEEEEecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999999732 344455566665 4567799999999999999999999975
No 192
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-36 Score=334.03 Aligned_cols=207 Identities=23% Similarity=0.320 Sum_probs=174.5
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-------CceEEEEeccCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1136)
.+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 356999999999999999999999999999999999999876 9999999988754321 346999999998
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 299 (1136)
+++.+||+||+.+.....+... ......++++++.+||.+..++.+
T Consensus 113 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 158 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKYP 158 (269)
T ss_pred cCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCc
Confidence 8989999999988643321100 001123678899999988777766
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
+ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+++
T Consensus 159 ~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiii~tH~~~~~~~~~d~v~ 232 (269)
T cd03294 159 D-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAEL-QKTIVFITHDLDEALRLGDRIA 232 (269)
T ss_pred c-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEE
Confidence 4 599999999999999999999999999999999999999999999987543 4566668888999999999999
Q ss_pred EEcCCeEEEecChhhHH
Q 001154 380 LLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~ 396 (1136)
+|++|++++.|+.+++.
T Consensus 233 ~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 233 IMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999987764
No 193
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=330.95 Aligned_cols=202 Identities=21% Similarity=0.317 Sum_probs=167.8
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+++||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++
T Consensus 16 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (237)
T PRK11614 16 GKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFS 93 (237)
T ss_pred CCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEecCCCCHHHHHHhCEEEeccCcccCC
Confidence 34579999999999999999999999999999999999876 4689999999876431 24567999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHc-CCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELV-ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l-~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
.+||.||+.+..... . .....+.++++++.+ ++.+..+.. +..||+|||||++|||+|+.+|+||+|||
T Consensus 94 ~~tv~~~l~~~~~~~---~--~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~illlDE 163 (237)
T PRK11614 94 RMTVEENLAMGGFFA---E--RDQFQERIKWVYELFPRLHERRIQR-----AGTMSGGEQQMLAIGRALMSQPRLLLLDE 163 (237)
T ss_pred CCcHHHHHHHhhhcc---C--hhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 899999998754221 1 122233456677776 465444432 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 222 (237)
T PRK11614 164 PSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVLEDTGD 222 (237)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEeeCCHH
Confidence 99999999999999999998877999999999976 57788999999985 7999998753
No 194
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.5e-36 Score=332.10 Aligned_cols=204 Identities=25% Similarity=0.330 Sum_probs=171.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----------------hcccce
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----------------ETFARI 903 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~ 903 (1136)
++..+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++.. ..+++.
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (252)
T TIGR03005 11 GILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNK 88 (252)
T ss_pred CCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccccccchhHHHHHhhC
Confidence 34579999999999999999999999999999999999876 468999999986532 134567
Q ss_pred EEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHH
Q 001154 904 SGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVEL 983 (1136)
Q Consensus 904 ~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL 983 (1136)
++|++|++.+++..|+.||+.+...... ........+.++++++.+++.+..+... ..||||||||++|||||
T Consensus 89 i~~v~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral 161 (252)
T TIGR03005 89 IGMVFQSFNLFPHKTVLDNVTEAPVLVL--GMARAEAEKRAMELLDMVGLADKADHMP-----AQLSGGQQQRVAIARAL 161 (252)
T ss_pred eEEEecCcccCCCCcHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCChhHhhcCh-----hhcCHHHHHHHHHHHHH
Confidence 9999999999999999999987532111 1223334456788999999977666543 57999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 984 VANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 984 ~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|++ |++++.|+.
T Consensus 162 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 162 AMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFDK-GRIVEQGKP 231 (252)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999999998764 899999999986 46678999999985 799988874
No 195
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.7e-36 Score=330.40 Aligned_cols=209 Identities=21% Similarity=0.281 Sum_probs=168.0
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---cc-cceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---TF-ARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~-~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+|+||+|++||+++|+||||||||||+++|+|.....+.+|+|.++|.++... .. +..++|++|++.+++
T Consensus 11 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (243)
T TIGR01978 11 EDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIP 90 (243)
T ss_pred CCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccC
Confidence 45679999999999999999999999999999999999841114689999999875431 22 334899999999999
Q ss_pred CCcHHHHHHHHhhhcCCC----cccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 916 GLTVLESLLFSAWLRLPS----EIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~----~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+|++|++.+........ .....+..+.+.++++.+++. ...+..+. ..||||||||++|||+|+.+|++|
T Consensus 91 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~ll 166 (243)
T TIGR01978 91 GVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLA 166 (243)
T ss_pred CcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998754322110 012223345678899999986 34444321 249999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~-~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||||+|||+.++..+.+.|+++.++|+|||++||+++ .+... +|++++|+ +|++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~-~G~i~~~g~~ 229 (243)
T TIGR01978 167 ILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLL-DGRIVKSGDV 229 (243)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEe-CCEEEEecCH
Confidence 999999999999999999999999777999999999976 35555 79999997 5799988874
No 196
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-36 Score=331.15 Aligned_cols=207 Identities=27% Similarity=0.310 Sum_probs=167.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC---ceeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|.++.. ..+++.+||++|++
T Consensus 23 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 102 (258)
T PRK14268 23 GEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKP 102 (258)
T ss_pred CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCC
Confidence 345799999999999999999999999999999999998653 1368999999987532 23456799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++ +|++||+.|....+. .......+.++++++.+++.+....... ..+..|||||||||+|||||+.+|+|||
T Consensus 103 ~~~~-~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgG~~qrv~laral~~~p~lll 177 (258)
T PRK14268 103 NPFP-MSIYDNVAYGPRIHG---ANKKDLDGVVENALRSAALWDETSDRLK-SPALSLSGGQQQRLCIARTLAVKPKIIL 177 (258)
T ss_pred ccCc-ccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcchhhhhc-CChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 8887 899999988653321 2223334567889998888432111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+++.|+++.+ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 178 lDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 237 (258)
T PRK14268 178 FDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL-MGELIEFGQT 237 (258)
T ss_pred EeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999864 899999999976 4667899999997 5799998874
No 197
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-36 Score=333.14 Aligned_cols=203 Identities=27% Similarity=0.398 Sum_probs=170.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1136)
+++.+|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++.
T Consensus 13 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (258)
T PRK13548 13 GGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFP 90 (258)
T ss_pred CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcccCCHHHhhhheEEEccCCcCCCC
Confidence 45679999999999999999999999999999999999876 468999999986532 2345679999999888888
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHh------hCCCEE
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV------ANPSIV 990 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~------~~p~il 990 (1136)
+|++||+.+...... ......++.++++++.+++.+..+..+ ..||||||||++||+||+ .+|++|
T Consensus 91 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe~qrv~la~al~~~~~~~~~p~ll 162 (258)
T PRK13548 91 FTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGEQQRVQLARVLAQLWEPDGPPRWL 162 (258)
T ss_pred CCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhcccccCCCCCEE
Confidence 999999987542211 112233456788999999987666543 479999999999999999 599999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIV-NTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~-~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||||+|||+.++..+.+.|+++. ++|.|||++||+++ .+...+|++++|.+ |++++.|+.
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 225 (258)
T PRK13548 163 LLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-GRLVADGTP 225 (258)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-CEEEeeCCH
Confidence 9999999999999999999999987 57999999999976 46678999999985 789888875
No 198
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.5e-36 Score=345.25 Aligned_cols=205 Identities=22% Similarity=0.309 Sum_probs=175.7
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCc----cCCh---hc---c-cceEEEe
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY----PKRQ---ET---F-ARISGYC 907 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~gyv 907 (1136)
++...+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|+++|. ++.. .. + ++.+|||
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 466789999999999999999999999999999999999876 46899999996 2211 11 2 2579999
Q ss_pred ccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 001154 908 EQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1136)
Q Consensus 908 ~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1136)
+|++.++|.+||+||+.|+...+. ....+.++.++++++.++|.+..+... .+||||||||++|||||+.+|
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g---~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQG---MPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999998754432 233455567889999999988777654 479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+||||||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+.+|++++|++ |+++..|+..
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999999999999764 999999999986 57788999999984 7999998864
No 199
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.9e-36 Score=329.90 Aligned_cols=205 Identities=24% Similarity=0.341 Sum_probs=170.2
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++
T Consensus 13 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (242)
T TIGR03411 13 DGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFE 90 (242)
T ss_pred CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCC
Confidence 44679999999999999999999999999999999999876 4689999999875421 12356999999999999
Q ss_pred CCcHHHHHHHHhhhcCC--C---cccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 916 GLTVLESLLFSAWLRLP--S---EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~--~---~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+|++||+.+....... . .......++.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|
T Consensus 91 ~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrv~laral~~~p~~l 165 (242)
T TIGR03411 91 NLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----GLLSHGQKQWLEIGMLLMQDPKLL 165 (242)
T ss_pred CCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999875421100 0 0112234456889999999987666543 479999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+++..|+.
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~~~~~~~~ 226 (242)
T TIGR03411 166 LLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GSVLAEGSL 226 (242)
T ss_pred EecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEeeCCH
Confidence 99999999999999999999999865 799999999976 46678999999985 789888874
No 200
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-36 Score=324.18 Aligned_cols=194 Identities=27% Similarity=0.376 Sum_probs=163.0
Q ss_pred eeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh-cccceEEEeccCCCCCCCCcHHHHHHH
Q 001154 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLESLLF 925 (1136)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~ltv~e~l~~ 925 (1136)
|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 4689999999876431 234679999999999999999999987
Q ss_pred HhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 001154 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1136)
Q Consensus 926 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1005 (1136)
....+.. . ....++.++++++.+++.+..+..+ .+||+|||||++|||||+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~~--~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGLK--L-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred ccccccC--c-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 5322111 1 1233456788999999987666543 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 1006 IVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 1006 ~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
.+++.|+++++ .|+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999875 4999999999976 46677999999985 7877643
No 201
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-36 Score=330.80 Aligned_cols=210 Identities=24% Similarity=0.286 Sum_probs=169.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh---hcccceEEEeccCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ---ETFARISGYCEQNDIH 913 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~ 913 (1136)
++..+|+|+||+|++||++||+||||||||||+++|+|...+. +.+|+|.++|.++.. ..+++.+||++|++.+
T Consensus 14 ~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~ 93 (250)
T PRK14247 14 GQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNP 93 (250)
T ss_pred CCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCcc
Confidence 4457999999999999999999999999999999999986531 368999999987632 3455679999999988
Q ss_pred CCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 914 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
++.+|+.||+.+....+... ....+..+.++++++.+++.+...... ...+.+||||||||++|||||+.+|+||+||
T Consensus 94 ~~~~tv~enl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgG~~qrv~laral~~~p~lllLD 171 (250)
T PRK14247 94 IPNLSIFENVALGLKLNRLV-KSKKELQERVRWALEKAQLWDEVKDRL-DAPAGKLSGGQQQRLCIARALAFQPEVLLAD 171 (250)
T ss_pred CCCCcHHHHHHHHHHhcccc-CCHHHHHHHHHHHHHHcCCCcchhhhh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 88999999998864322110 122334456788999999854211111 1123579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+|||+.++..+.+.|+++. +|+|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 172 EP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 229 (250)
T PRK14247 172 EPTANLDPENTAKIESLFLELK-KDMTIVLVTHFPQ-QAARISDYVAFLY-KGQIVEWGPT 229 (250)
T ss_pred CCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhcCEEEEEE-CCeEEEECCH
Confidence 9999999999999999999985 4899999999986 4667899999998 5789988875
No 202
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-36 Score=336.58 Aligned_cols=200 Identities=25% Similarity=0.328 Sum_probs=170.8
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCC-CCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1136)
..+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 459999999999999999999999999999999999876 468999999987642 234567999999973 66778
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
||+||+.|..... ....++..+.++++++.++|.+..+... ..||||||||++|||||+.+|+||+|||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~ 169 (279)
T PRK13650 98 TVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSGGQKQRVAIAGAVAMRPKIIILDEATS 169 (279)
T ss_pred cHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcc
Confidence 9999998864322 2234445567889999999987766543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+++.|++++++ |+|||++||+++ .+ ..+|++++|. +|+++..|+.
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~-~G~i~~~g~~ 224 (279)
T PRK13650 170 MLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMK-NGQVESTSTP 224 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999865 999999999976 34 6799999997 5799988875
No 203
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.1e-36 Score=341.70 Aligned_cols=205 Identities=22% Similarity=0.270 Sum_probs=172.2
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCC--C
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--I 912 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~ 912 (1136)
...+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++||+|++ .
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 3679999999999999999999999999999999999876 468999999987642 12456799999997 5
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
++|.+|+.|++.+......+ .....+.++.+.++++.+++. ...+.. +.+||||||||++|||||+.+|++||
T Consensus 111 l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p~~LSgG~~QRv~iArAL~~~P~lli 184 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----PHEFSGGQCQRIGIARALILEPKLII 184 (331)
T ss_pred cCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 78899999999876433211 123445566788999999994 344443 35899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|. .|+++..|+..
T Consensus 185 lDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~-~G~ive~g~~~ 247 (331)
T PRK15079 185 CDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMY-LGHAVELGTYD 247 (331)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 99999999999999999999999764 999999999976 4667899999998 47999999753
No 204
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.6e-36 Score=328.23 Aligned_cols=214 Identities=26% Similarity=0.370 Sum_probs=173.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 46999999999999999999999999999999999998776 9999999988765432 2469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.+.....+.....+ .. . ... .......++++++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~~~~----~~------~-~~~-------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 90 LTVLENVMVAAQARTGSGLLL----AR------A-RRE-------------EREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCHHHHHHHHHhhcccccccc----cc------c-ccc-------------HHHHHHHHHHHHHHcCccchhhCCh----
Confidence 999999988654321100000 00 0 000 0011234788899999987766655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.+++|++++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999999875 3 45666788999999999999999999
Q ss_pred CeEEEecChhhH
Q 001154 384 GQIVYQGPRVSV 395 (1136)
Q Consensus 384 G~iv~~G~~~~~ 395 (1136)
|++++.|+++++
T Consensus 219 G~i~~~~~~~~~ 230 (236)
T cd03219 219 GRVIAEGTPDEV 230 (236)
T ss_pred CEEEeecCHHHh
Confidence 999999988765
No 205
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-36 Score=328.14 Aligned_cols=209 Identities=29% Similarity=0.394 Sum_probs=172.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 46999999999999999999999999999999999998775 9999999988754322 3579999999988889999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.|+....+...+.+ . ......++.+++.+||.+..++.+ ..
T Consensus 92 ~e~l~~~~~~~~~~~~~~-----------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERPP-----------------E-------------AEIRAKVHELLKLVQLDWLADRYP-----AQ 136 (239)
T ss_pred HHHHhhhhhhccccccCC-----------------H-------------HHHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 999988643221100000 0 001123678899999987666655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDEL-HVTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 99999999999999999999999999999999999999999999987533 45566678888899999999999999999
Q ss_pred EEecChhhH
Q 001154 387 VYQGPRVSV 395 (1136)
Q Consensus 387 v~~G~~~~~ 395 (1136)
++.|+.+++
T Consensus 216 ~~~~~~~~~ 224 (239)
T cd03296 216 EQVGTPDEV 224 (239)
T ss_pred EEecCHHHH
Confidence 999988765
No 206
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=332.87 Aligned_cols=208 Identities=25% Similarity=0.381 Sum_probs=172.0
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSP 915 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~ 915 (1136)
++++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|+..+++
T Consensus 12 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (255)
T PRK11231 12 YGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPE 89 (255)
T ss_pred ECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhHHCCHHHHhhheEEecccCCCCC
Confidence 345679999999999999999999999999999999999866 468999999986532 234567999999988888
Q ss_pred CCcHHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 916 GLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
.+|+.||+.+....... .........+.++++++.+++.+..+... ..||||||||++|||||+.+|++|||||
T Consensus 90 ~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 164 (255)
T PRK11231 90 GITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGGQRQRAFLAMVLAQDTPVVLLDE 164 (255)
T ss_pred CccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 89999999875211000 00111223456788999999977666543 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 165 P~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 223 (255)
T PRK11231 165 PTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQGTPE 223 (255)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEcCHH
Confidence 99999999999999999998777999999999986 57788999999985 7898888754
No 207
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=333.25 Aligned_cols=205 Identities=23% Similarity=0.320 Sum_probs=171.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCC-CCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1136)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++||+|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35999999999999999999999999999999999999876 999999999875432 2357999999973 6778
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+|||.|+....+... .+...+++++++.+||++..+..+
T Consensus 97 ~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13650 97 ATVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP---- 138 (279)
T ss_pred ccHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 899999988643221100 001224788899999987776655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++ ..+|+|++|++
T Consensus 139 -~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 139 -ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDY-QMTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999987643 45666677888887 58999999999
Q ss_pred CeEEEecChhhHH
Q 001154 384 GQIVYQGPRVSVL 396 (1136)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1136)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (279)
T PRK13650 216 GQVESTSTPRELF 228 (279)
T ss_pred CEEEEECCHHHHH
Confidence 9999999988764
No 208
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-36 Score=334.36 Aligned_cols=207 Identities=29% Similarity=0.409 Sum_probs=170.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1136)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.
T Consensus 22 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (265)
T PRK10575 22 PGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEG 99 (265)
T ss_pred CCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEehhhCCHHHHhhheEEeccCCCCCCC
Confidence 44679999999999999999999999999999999999876 468999999986532 3345679999999888889
Q ss_pred CcHHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 917 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
+|+.||+.+....... .........+.++++++.+++.+..+..+ ..||||||||++|||||+.+|+|||||||
T Consensus 100 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~lllLDEP 174 (265)
T PRK10575 100 MTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSGGERQRAWIAMLVAQDSRCLLLDEP 174 (265)
T ss_pred ccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999875321100 00111223456788999999977666543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|+|||+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|. +|+++..|+..
T Consensus 175 t~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~-~G~i~~~~~~~ 233 (265)
T PRK10575 175 TSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALR-GGEMIAQGTPA 233 (265)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEecCHH
Confidence 9999999999999999999764 899999999976 4678899999998 57899888753
No 209
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=335.06 Aligned_cols=201 Identities=24% Similarity=0.332 Sum_probs=170.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCCC-CCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDI-HSPG 916 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~-~~~~ 916 (1136)
..+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .+..
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 469999999999999999999999999999999999876 468999999987642 234567999999975 3567
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
.|++||+.|..... .....+..+.++++++.+++.+..+... ..||+|||||++|||||+.+|+||||||||
T Consensus 93 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt 164 (274)
T PRK13644 93 RTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSGGQGQCVALAGILTMEPECLIFDEVT 164 (274)
T ss_pred chHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998765322 1233444566888999999987766543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+|||+.++..+++.|++++++|+|||++||+++ ++ +.+|++++|++ |++++.|+..
T Consensus 165 ~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~g~~~ 220 (274)
T PRK13644 165 SMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLEGEPE 220 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999877999999999976 34 67999999985 7899998753
No 210
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.8e-36 Score=324.65 Aligned_cols=195 Identities=25% Similarity=0.383 Sum_probs=162.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-------CCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 220 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999998876 999999998875432 13579999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++.+||+||+.++....+... ......++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999988654321100 001124678899999987766655
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++. +||++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEA-GTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHh-hhcEEEE
Confidence 4699999999999999999999999999999999999999999999987532 455666778888876 9999999
Q ss_pred EcCCeE
Q 001154 381 LSEGQI 386 (1136)
Q Consensus 381 L~~G~i 386 (1136)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 211
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-36 Score=331.04 Aligned_cols=210 Identities=25% Similarity=0.270 Sum_probs=169.0
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCC-----hhcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~~ 911 (1136)
++..+|+|+||+|++||++||+||||||||||+++|+|..++. +.+|+|.++|.++. ...+++.++|++|++
T Consensus 15 ~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 94 (253)
T PRK14267 15 GSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYP 94 (253)
T ss_pred CCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCC
Confidence 3457999999999999999999999999999999999986532 35899999998763 123456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++.+|+.||+.+....+.. ........+.++++++.+++......... ..+..||||||||++|||||+.+|++|+
T Consensus 95 ~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lll 172 (253)
T PRK14267 95 NPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLN-DYPSNLSGGQRQRLVIARALAMKPKILL 172 (253)
T ss_pred ccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhc-cChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999876533211 01223334567888898887532111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++++ ++|||++||+++ .+...+|++++|++ |++++.|+.
T Consensus 173 lDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (253)
T PRK14267 173 MDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-GKLIEVGPT 232 (253)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999864 799999999976 46778999999984 799988875
No 212
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.8e-36 Score=326.70 Aligned_cols=204 Identities=21% Similarity=0.342 Sum_probs=172.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999998876 9999999987654321 2469999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.+.....+... ......++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 131 (232)
T cd03218 90 LTVEENILAVLEIRGLSK----------------------------------KEREEKLEELLEEFHITHLRKSKA---- 131 (232)
T ss_pred CcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh----
Confidence 999999987543221100 001224678899999987776655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++.+++|+|++|++
T Consensus 132 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 132 -SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDR--GIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999988752 45667788888899999999999999
Q ss_pred CeEEEecChhhH
Q 001154 384 GQIVYQGPRVSV 395 (1136)
Q Consensus 384 G~iv~~G~~~~~ 395 (1136)
|++++.|+.+++
T Consensus 209 G~i~~~~~~~~~ 220 (232)
T cd03218 209 GKVLAEGTPEEI 220 (232)
T ss_pred CeEEEEeCHHHh
Confidence 999999988765
No 213
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-36 Score=323.46 Aligned_cols=200 Identities=30% Similarity=0.389 Sum_probs=168.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1136)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999998775 9999999987753 346799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 001154 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1136)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~L 307 (1136)
||+.++....+... ......++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99988643321100 001124678899999987766655 469
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 001154 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1136)
Q Consensus 308 SGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~--~G~ 385 (1136)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRET-GKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999886533 4566668888889999999999999 799
Q ss_pred EEEecCh
Q 001154 386 IVYQGPR 392 (1136)
Q Consensus 386 iv~~G~~ 392 (1136)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988764
No 214
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-36 Score=335.39 Aligned_cols=200 Identities=28% Similarity=0.331 Sum_probs=170.3
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCC-CCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1136)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 469999999999999999999999999999999999876 468999999987643 234567999999973 66678
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
||.||+.+..... .....+..+.++++++.++|.+..+... ..||||||||++|||||+.+|+||||||||+
T Consensus 98 tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt~ 169 (279)
T PRK13635 98 TVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGGQKQRVAIAGVLALQPDIIILDEATS 169 (279)
T ss_pred cHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998865332 1233444566889999999987766553 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+++.|+++.++ |+|||++||+++. + +.+|++++|. +|++++.|+.
T Consensus 170 gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i~~l~-~G~i~~~g~~ 224 (279)
T PRK13635 170 MLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRVIVMN-KGEILEEGTP 224 (279)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999875 8999999999763 4 4699999998 5799999875
No 215
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-36 Score=327.13 Aligned_cols=204 Identities=25% Similarity=0.369 Sum_probs=172.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC------CceEEEEeccCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP------PRTSAYVSQQDWQVA 222 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 222 (1136)
++|+|+|++|++|++++|+|||||||||||++|+|.+++. +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999876 9999999998754321 357999999999899
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
.+||+||+.+.....+... ......++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999988643221100 000123678899999987776654
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINREL-GLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999986532 4566668888889999999999999
Q ss_pred CCeEEEecChhhH
Q 001154 383 EGQIVYQGPRVSV 395 (1136)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1136)
+|++++.|+.+++
T Consensus 216 ~G~i~~~~~~~~~ 228 (233)
T cd03258 216 KGEVVEEGTVEEV 228 (233)
T ss_pred CCEEEEecCHHHH
Confidence 9999999987765
No 216
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-36 Score=299.37 Aligned_cols=201 Identities=28% Similarity=0.395 Sum_probs=177.1
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHH
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e 921 (1136)
..+|+|+|++|.+||.++++||||||||||||+++|..+ +..|+|.+||.++....- .-|.|+|++.++|-+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 458999999999999999999999999999999999987 568999999998754321 2389999999999999999
Q ss_pred HHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 001154 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1136)
Q Consensus 922 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~ 1001 (1136)
|+.|+..++. +.+.++.+.+.+.+..++|.+..++.+ .+||||||||+.|||||+.+|++|+||||.+.||.
T Consensus 94 NvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 9999988874 567888889999999999999887664 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecC-cEEEEeCCCC
Q 001154 1002 RAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG-GELIYAGPLG 1055 (1136)
Q Consensus 1002 ~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~g-G~~~~~g~~~ 1055 (1136)
-+++.++++|-++.+ +|+.+++|||+.+ +..-.+++++||+.| |+|+..-|++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 999999999988864 6999999999976 455567999999843 6888776653
No 217
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=323.78 Aligned_cols=201 Identities=20% Similarity=0.309 Sum_probs=167.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-------CceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1136)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|+++|.++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999998775 9999999998765432 2569999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++.+||+||+.+.....+... .+.+.+++++++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999988643221100 001224778899999987766654
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
..||||||||++||+|++.+|++|+|||||+|||+.++..+.+.|+++++. ++++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 469999999999999999999999999999999999999999999988653 24566667788888766 589999
Q ss_pred EcCCeEEEecCh
Q 001154 381 LSEGQIVYQGPR 392 (1136)
Q Consensus 381 L~~G~iv~~G~~ 392 (1136)
|.+|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 218
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.4e-36 Score=326.99 Aligned_cols=202 Identities=27% Similarity=0.337 Sum_probs=166.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+|+||++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++
T Consensus 11 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (230)
T TIGR03410 11 GQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFP 88 (230)
T ss_pred CCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccC
Confidence 45679999999999999999999999999999999999876 4689999999875421 12457999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcC-CCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVE-LTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~-l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
.+|++||+.+....+.. . ..+..+++++.++ +.+..+.. +..||||||||++|||+|+.+|++|+|||
T Consensus 89 ~~tv~~~l~~~~~~~~~---~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDE 157 (230)
T TIGR03410 89 RLTVEENLLTGLAALPR---R---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDE 157 (230)
T ss_pred CCcHHHHHHHHHHhcCc---c---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999876433211 1 1233566777776 44444443 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
||+|||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|. +|+++..|+...
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~-~g~i~~~~~~~~ 218 (230)
T TIGR03410 158 PTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVME-RGRVVASGAGDE 218 (230)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCHHH
Confidence 99999999999999999998764 899999999976 4666799999998 579999888643
No 219
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.6e-36 Score=338.91 Aligned_cols=205 Identities=26% Similarity=0.379 Sum_probs=176.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC--CCceEEEEeccCCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 225 (1136)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999998876 999999998875422 2357999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|.|||.|.++..+... .+...+++.+++.+||++..++.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999988655432110 0012247789999999988877664
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||||||+||+||+++|++|+|||||+|||+.++.++++.|++++. + ++|+.++|..+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--D-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998853 3 667778899999999999999999999
Q ss_pred EEEecChhhHHH
Q 001154 386 IVYQGPRVSVLD 397 (1136)
Q Consensus 386 iv~~G~~~~~~~ 397 (1136)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999988754
No 220
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-36 Score=334.87 Aligned_cols=203 Identities=25% Similarity=0.335 Sum_probs=168.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-----hcccceEEEeccCCCC-
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIH- 913 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~- 913 (1136)
+++.+|+|+||+|.+||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++..
T Consensus 12 ~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 89 (271)
T PRK13638 12 QDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQ 89 (271)
T ss_pred CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcccccCCHHHHHhheEEEeeChhhc
Confidence 44569999999999999999999999999999999999876 468999999987631 2345679999998753
Q ss_pred CCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 914 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
....|+.||+.+....+ .....+..+.++++++.+++.+..+..+ ..||||||||++|||+|+.+|+|||||
T Consensus 90 ~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~laraL~~~p~lllLD 161 (271)
T PRK13638 90 IFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLSHGQKKRVAIAGALVLQARYLLLD 161 (271)
T ss_pred cccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCCHHHHHHHHHHHHHHcCCCEEEEe
Confidence 34568999998764332 1223333456788999999977666543 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+|||+.++..+.+.|+++.++|.|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 162 EPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (271)
T PRK13638 162 EPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILTHGAP 220 (271)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999777999999999976 46678999999985 799998874
No 221
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.6e-36 Score=321.92 Aligned_cols=199 Identities=31% Similarity=0.403 Sum_probs=168.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-CCceEEEEeccCCCCCCCCHH
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVR 227 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~ 227 (1136)
++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 5999999999999999999999999999999999998776 999999998875432 235799999999888899999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 001154 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1136)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~L 307 (1136)
||+.+.....+... .+....++.+++.+||++..+..++ .|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKPK-----QL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCChh-----hC
Confidence 99988643321100 0012246788999999887776654 59
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001154 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1136)
Q Consensus 308 SGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 387 (1136)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999987543 455666788889999999999999999999
Q ss_pred Eec
Q 001154 388 YQG 390 (1136)
Q Consensus 388 ~~G 390 (1136)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 222
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-35 Score=324.02 Aligned_cols=196 Identities=27% Similarity=0.381 Sum_probs=164.6
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c---c-cceEEEeccCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T---F-ARISGYCEQNDIHS 914 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~---~-~~~~gyv~Q~~~~~ 914 (1136)
..+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . . ++.++|++|++.++
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 369999999999999999999999999999999999876 4689999999875421 1 1 35799999999998
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+|+.||+.+....+. .......+.+.++++.+++.+..+..+ ..||+|||||++|||||+.+|++|||||
T Consensus 101 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrl~la~al~~~p~llllDE 172 (228)
T PRK10584 101 PTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQLSGGEQQRVALARAFNGRPDVLFADE 172 (228)
T ss_pred CCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999999987643321 122334566788999999977665543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1050 (1136)
||+|||+.++..+.+.|++++++ |.|||++||+++ .+ +.+|++++|++ |+++.
T Consensus 173 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~i~~ 226 (228)
T PRK10584 173 PTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQLQE 226 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEe
Confidence 99999999999999999998754 899999999976 34 56999999985 67764
No 223
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=6.8e-36 Score=320.61 Aligned_cols=191 Identities=24% Similarity=0.360 Sum_probs=162.1
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCC---h----hcccceEEEeccCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR---Q----ETFARISGYCEQNDI 912 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~ 912 (1136)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++. . ...++.++|++|++.
T Consensus 9 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~ 86 (206)
T TIGR03608 9 GDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFA 86 (206)
T ss_pred CCEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchh
Confidence 45679999999999999999999999999999999999876 46899999998742 1 124567999999999
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
+++.+|++||+.+....+. .......+.++++++.+++.+..+..+ .+||+|||||++|||||+.+|++|+|
T Consensus 87 ~~~~~t~~e~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llll 158 (206)
T TIGR03608 87 LIENETVEENLDLGLKYKK---LSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILA 158 (206)
T ss_pred hccCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 9989999999988654321 223334556788999999977766543 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEE
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l 1042 (1136)
||||+|||+.++..+.+.|+++.++|.|||++||++. ..+.+|++++|
T Consensus 159 DEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 159 DEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred eCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 9999999999999999999998777999999999975 34679998875
No 224
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-36 Score=335.03 Aligned_cols=200 Identities=27% Similarity=0.351 Sum_probs=166.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccCC--C
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQND--I 912 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~--~ 912 (1136)
+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++ .
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 469999999999999999999999999999999999876 468999999987532 23456799999986 3
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
+++ .|++||+.|...... ....+..+.++++++.+++.. ..+.. +..||||||||++|||||+.+|++||
T Consensus 98 ~~~-~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lll 168 (280)
T PRK13649 98 LFE-ETVLKDVAFGPQNFG---VSQEEAEALAREKLALVGISESLFEKN-----PFELSGGQMRRVAIAGILAMEPKILV 168 (280)
T ss_pred hcc-ccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 444 699999987643221 223334456788899999863 44443 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 229 (280)
T PRK13649 169 LDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLE-KGKLVLSGKP 229 (280)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999999777999999999976 4667899999998 4789888875
No 225
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=330.19 Aligned_cols=206 Identities=22% Similarity=0.288 Sum_probs=169.3
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCC-----hhcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-----QETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~~ 911 (1136)
++..+|+|+||+|++||++||+||||||||||+++|+|..++. +.+|+|.++|.++. ...+++.+||++|++
T Consensus 15 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 94 (258)
T PRK14241 15 GSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRP 94 (258)
T ss_pred CCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccc
Confidence 4457999999999999999999999999999999999986532 25899999998753 123456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1136)
.+++.+|++||+.+....+. .......++.++++++.+++.+ ..+. .+.+|||||||||+|||||+.+|
T Consensus 95 ~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~G~~qrv~laral~~~p 167 (258)
T PRK14241 95 NPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDK-----PGGGLSGGQQQRLCIARAIAVEP 167 (258)
T ss_pred ccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhC-----CcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999987654321 1122334456788899998842 2222 23579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec-----CcEEEEeCCC
Q 001154 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR-----GGELIYAGPL 1054 (1136)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~-----gG~~~~~g~~ 1054 (1136)
++|+|||||+|||+.++..+.+.|++++ +++|||++||+++ ++.+.+|++++|++ .|++++.|+.
T Consensus 168 ~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tviivsH~~~-~~~~~~d~i~~l~~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 168 DVLLMDEPCSALDPISTLAIEDLINELK-QDYTIVIVTHNMQ-QAARVSDQTAFFNLEATGKPGRLVEIDDT 237 (258)
T ss_pred CEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhCCEEEEEecccCCCCceEEecCCH
Confidence 9999999999999999999999999986 4789999999976 46788999999972 5899998875
No 226
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-36 Score=333.93 Aligned_cols=201 Identities=25% Similarity=0.358 Sum_probs=170.0
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCC-CCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1136)
..+|+||||++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++. .+...
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 459999999999999999999999999999999999876 568999999987642 234567899999963 33467
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
||.||+.+..... ........+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|||||||+
T Consensus 95 tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrl~laraL~~~p~llilDEPt~ 166 (277)
T PRK13652 95 TVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTA 166 (277)
T ss_pred cHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998764322 2233344456789999999987666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 167 gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~g~~ 222 (277)
T PRK13652 167 GLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAYGTV 222 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEECCH
Confidence 99999999999999999765 899999999986 56788999999985 799999875
No 227
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-36 Score=302.23 Aligned_cols=206 Identities=28% Similarity=0.468 Sum_probs=174.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1136)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||.+++.+.+ .+.-+..||+..+-+..|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 5999999999999999999999999999999999999887 9999999999988754 256689999987766789
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+|.+.++..-.+.+.. |. +..+.++.+|...++.+.+.. ..+
T Consensus 92 v~eVV~mGr~p~~~g~~-----------------~~---------------e~~~i~~~ala~~d~~~la~R-----~y~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGRE-----------------PE---------------EDERIAAQALAATDLSGLAGR-----DYR 134 (259)
T ss_pred HHHHHHhcccccccCCC-----------------ch---------------hhHHHHHHHHHHcChhhhhcc-----chh
Confidence 99999997654322211 10 112347788888888887654 345
Q ss_pred CCChhhhhHHHHHHHHhC------CCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 306 GISGGQKKRLTTGELLVG------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~------~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
.|||||||||.+||.|+. ++++||||||||+||..-...+++..|++++. +..|+.++|+.+-+..++|+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhheee
Confidence 799999999999999974 44699999999999999999999999999985 3566778899999999999999
Q ss_pred EEcCCeEEEecChhhHH
Q 001154 380 LLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~ 396 (1136)
+|++||++..|++++++
T Consensus 213 ll~~Grv~a~g~p~~vl 229 (259)
T COG4559 213 LLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeCCeEeecCCHHHhc
Confidence 99999999999998886
No 228
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4e-36 Score=324.79 Aligned_cols=195 Identities=25% Similarity=0.364 Sum_probs=164.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1136)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999998776 999999998775432 235799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||+||+.+.....+... .....+++++++.+||++..++.+
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 136 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP-- 136 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 99999999988654321100 001224678899999987776655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. +++|+.++|+.+++..+||++++|
T Consensus 137 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 137 ---MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRR--GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999988653 456667889999999999999999
Q ss_pred cCCeE
Q 001154 382 SEGQI 386 (1136)
Q Consensus 382 ~~G~i 386 (1136)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 229
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.9e-36 Score=332.41 Aligned_cols=209 Identities=28% Similarity=0.390 Sum_probs=171.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc-eeEEEEEEcCccCCh--------hcccceEEEeccC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQ--------ETFARISGYCEQN 910 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~--------~~~~~~~gyv~Q~ 910 (1136)
++..+|+|+||++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.++.. ...++.++|++|+
T Consensus 15 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~ 94 (262)
T PRK09984 15 NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQ 94 (262)
T ss_pred CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccc
Confidence 4567999999999999999999999999999999999987542 236999999986532 2235578999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCC-----cccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 001154 911 DIHSPGLTVLESLLFSAWLRLPS-----EIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~~-----~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~ 985 (1136)
+.+++.+|++||+.+......+. ..........++++++.+++.+..+... ..||+|||||++|||||+.
T Consensus 95 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~ 169 (262)
T PRK09984 95 FNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV-----STLSGGQQQRVAIARALMQ 169 (262)
T ss_pred cccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc-----cccCHHHHHHHHHHHHHhc
Confidence 99999999999998753210000 0111233456789999999977666543 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 986 ~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+|+||+|||||+|||+.++..+++.|+++++ .|.|||++||+++ .+.+.+|++++|.+ |++++.|+..
T Consensus 170 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 170 QAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIVALRQ-GHVFYDGSSQ 238 (262)
T ss_pred CCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999999999999975 4899999999986 46788999999984 7899988764
No 230
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-36 Score=336.50 Aligned_cols=206 Identities=23% Similarity=0.309 Sum_probs=170.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-------CCCceEEEEeccCC-
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDW- 219 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 219 (1136)
.++|+|||++|++||+++|+||||||||||+++|+|.+.|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35999999999999999999999999999999999998876 99999999987531 12357999999862
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-cccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 298 (1136)
.+...||+||+.|+....+... .+...+++.+++.+||. ...++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 3445799999998643321100 00122478899999997 455654
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++... +++|+.++|+.+++.+++|+|
T Consensus 143 ~-----~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~-g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 P-----FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEK-GLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 4 4699999999999999999999999999999999999999999999987543 456777889999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 001154 379 ILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1136)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIF 234 (290)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999988764
No 231
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=8.3e-36 Score=322.82 Aligned_cols=198 Identities=28% Similarity=0.435 Sum_probs=166.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC--CCCceEEEEeccCCCCCCCCH
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 226 (1136)
++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999998876 99999999887532 124579999999988898999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.+.....+... ......++++++.+||++..+..+ ..
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 999987543221100 001224778899999987777655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
||||||||++||+|++.+|++|+|||||+|||+.++..+.+.|+++... +.+|+.++|+..++..++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRAL--GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998642 45666688888999999999999999999
Q ss_pred EEec
Q 001154 387 VYQG 390 (1136)
Q Consensus 387 v~~G 390 (1136)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8754
No 232
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-36 Score=332.98 Aligned_cols=207 Identities=24% Similarity=0.346 Sum_probs=171.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1136)
++..+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++.
T Consensus 18 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~ 95 (265)
T PRK10253 18 GKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGD 95 (265)
T ss_pred CCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCC
Confidence 44679999999999999999999999999999999999876 468999999987532 2345679999999998888
Q ss_pred CcHHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 917 LTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.|++||+.+......+ .....+...+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+||||
T Consensus 96 ~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEP 170 (265)
T PRK10253 96 ITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSGGQRQRAWIAMVLAQETAIMLLDEP 170 (265)
T ss_pred CcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCChHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 9999999875211100 00011223456788999999987666543 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|+|||+.++..+.+.|+++.++ |.|||++||++. ++.+.+|++++|. +|++++.|+..
T Consensus 171 t~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 229 (265)
T PRK10253 171 TTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALR-EGKIVAQGAPK 229 (265)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCHH
Confidence 9999999999999999999764 899999999986 5778899999998 57899988753
No 233
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-36 Score=292.56 Aligned_cols=200 Identities=30% Similarity=0.401 Sum_probs=171.5
Q ss_pred ccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccC
Q 001154 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQN 910 (1136)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~ 910 (1136)
..+...+|++|++.|++||.+||+|||||||||||-+|+|+.. +.+|+|.+.|++... .-..+.+|+|+|.
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQS 96 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQS 96 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEe
Confidence 4467889999999999999999999999999999999999887 468999999998643 1245679999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
..+.|++|..||+.....++.... ........+.++.+||.+-.+.+ +.+|||||+|||+||||++..|+||
T Consensus 97 F~Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vL 168 (228)
T COG4181 97 FHLIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVL 168 (228)
T ss_pred eeccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEE
Confidence 999999999999998887775322 22334567889999998766554 2589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEE
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIY 1050 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~ 1050 (1136)
|.||||-+||..+...|.+++-.+.. .|.|.|++||||. +...|||++-|.. |+++.
T Consensus 169 fADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 169 FADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred eccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 99999999999999999999988864 5999999999986 5678999999985 67763
No 234
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-36 Score=330.20 Aligned_cols=203 Identities=23% Similarity=0.273 Sum_probs=165.9
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh-----hcccceEEEeccCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1136)
+..+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.+||++|++.
T Consensus 19 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 98 (254)
T PRK14273 19 DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPN 98 (254)
T ss_pred CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccc
Confidence 456999999999999999999999999999999999986532 248999999987531 234667999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1136)
+++ +||+||+.+....+.. ......++.++++++.+++.+ ..+. .+..||||||||++|||+|+.+|+
T Consensus 99 ~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LSgG~~qrv~laral~~~p~ 170 (254)
T PRK14273 99 PFL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNT-----NALSLSGGQQQRLCIARTLAIEPN 170 (254)
T ss_pred ccc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhC-----CcccCCHHHHHHHHHHHHHHcCCC
Confidence 774 8999999886533211 122233456788888888732 2232 235899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||||||+|||+.++..+++.|++++ ++.|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 171 lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 233 (254)
T PRK14273 171 VILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL-NGCIEEESST 233 (254)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999999985 4799999999986 4677899999998 5799988874
No 235
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.3e-35 Score=318.19 Aligned_cols=210 Identities=19% Similarity=0.289 Sum_probs=154.8
Q ss_pred cceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCc
Q 001154 814 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 893 (1136)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 893 (1136)
|..+-.++++|-++ +.++++++++|-|.--..+|||||||.||||||++|.|... +..|+..-|
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKn-- 647 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKN-- 647 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhcc--
Confidence 44455566655442 56789999999999999999999999999999999999876 346664322
Q ss_pred cCChhcccceEEEeccCCC--CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCH
Q 001154 894 PKRQETFARISGYCEQNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLST 971 (1136)
Q Consensus 894 ~~~~~~~~~~~gyv~Q~~~--~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSg 971 (1136)
.+-.||+..|... +-..-|.-|.|.-. + .++.+ .....+-.+||..-++++- +..|||
T Consensus 648 ------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~--F----Nlpyq----~ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 648 ------HRLRIGWFDQHANEALNGEETPVEYLQRK--F----NLPYQ----EARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred ------ceeeeechhhhhHHhhccccCHHHHHHHh--c----CCChH----HHHHHhhhhhhhhccceEe----eeecCC
Confidence 2345788888643 33445666665311 1 12222 2346777888887777642 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 001154 972 EQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1136)
Q Consensus 972 Gqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1051 (1136)
||+-||++|---+..|+||||||||++||.++...+-++|++. ...||+++||..+ +.+.-+.+.|+.+.|.-...
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eId 783 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEID 783 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhcc
Confidence 9999999999999999999999999999999999999999885 4689999999774 66666788888776655566
Q ss_pred CCCCCchhHHHH
Q 001154 1052 GPLGSKSCELIK 1063 (1136)
Q Consensus 1052 g~~~~~~~~~~~ 1063 (1136)
|...+...++++
T Consensus 784 GdFeDYkkEVLd 795 (807)
T KOG0066|consen 784 GDFEDYKKEVLD 795 (807)
T ss_pred ccHHHHHHHHHH
Confidence 766544444443
No 236
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=344.52 Aligned_cols=206 Identities=20% Similarity=0.281 Sum_probs=175.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-------CceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1136)
..+|+|+|++|++|++++|+|||||||||||++|+|+++|. +|+|.++|.++..... ++.++||+|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 46899999999999999999999999999999999999876 9999999998765432 2479999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++.+||+||+.|.....+... .+...+++++++.+||++..++.+
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc-
Confidence 999999999998754332110 001124778899999987776655
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++..++|+|++
T Consensus 163 ----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 163 ----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEEE
Confidence 4699999999999999999999999999999999999999999999986543 45666688999999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 001154 381 LSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1136)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999988764
No 237
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8.2e-36 Score=330.66 Aligned_cols=207 Identities=28% Similarity=0.381 Sum_probs=171.1
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1136)
++..+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.
T Consensus 12 ~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (256)
T TIGR03873 12 GGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVP 89 (256)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcccCCHHHHhhheEEecccCccCCC
Confidence 45679999999999999999999999999999999999876 468999999987532 2345568999999877788
Q ss_pred CcHHHHHHHHhh-hcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 917 LTVLESLLFSAW-LRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 917 ltv~e~l~~~~~-lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
+|++||+.+... .+........+..+.+.++++.+++.+..+..+ ..||+|||||++|||||+.+|++++||||
T Consensus 90 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 164 (256)
T TIGR03873 90 LTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGGERQRVHVARALAQEPKLLLLDEP 164 (256)
T ss_pred CCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 999999987521 100000111223356788999999977666543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|+|||+.++..+++.|+++.++|.|||++||+++ .+.+.+|++++|++ |+++..|+..
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (256)
T TIGR03873 165 TNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAGPPR 222 (256)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEecCHH
Confidence 9999999999999999999777899999999987 56788999999985 7899888753
No 238
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=327.63 Aligned_cols=208 Identities=23% Similarity=0.297 Sum_probs=166.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCC---CCceeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||++++||++||+||||||||||+++|+|.. ++.+.+|+|.++|.++.. ..+++.++|++|++
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 93 (250)
T PRK14245 14 GDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRP 93 (250)
T ss_pred CCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCC
Confidence 4467999999999999999999999999999999999962 221247999999987642 23456799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++ .|+.||+.+....+.. .......+.++++++.+++.+....... ..+..||||||||++|||||+.+|++|+
T Consensus 94 ~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lll 169 (250)
T PRK14245 94 NPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAFALSGGQQQRLCIARAMAVSPSVLL 169 (250)
T ss_pred ccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8876 5999999876443311 1122234567888999988542211111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 170 LDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~-~G~~~~~~~~ 229 (250)
T PRK14245 170 MDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFY-MGEMVEYDDT 229 (250)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEE-CCEEEEECCH
Confidence 999999999999999999999985 5899999999986 4678899999998 4799999875
No 239
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.1e-36 Score=323.79 Aligned_cols=203 Identities=29% Similarity=0.419 Sum_probs=171.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC--CCCceEEEEeccCCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 225 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999998776 99999999886532 12456999999998888999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.+..+..+... ......++++++.+||.+..++.++
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRAR----- 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChhh-----
Confidence 9999988644322100 0001236778999999887776654
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ + ++|+.++|+.+++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998864 3 567778888889999999999999999
Q ss_pred EEEecChhhH
Q 001154 386 IVYQGPRVSV 395 (1136)
Q Consensus 386 iv~~G~~~~~ 395 (1136)
+++.|+.+++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999987653
No 240
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.5e-35 Score=324.30 Aligned_cols=202 Identities=28% Similarity=0.409 Sum_probs=168.5
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEec-cCCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCE-QNDIHSP 915 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~ 915 (1136)
++.+.+|+|+||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |.+.+++
T Consensus 31 ~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 31 YREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 456789999999999999999999999999999999999876 468999999986432 23456799997 5567778
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.+|++|++.+...++. ....+..+.++++++.+++.+..+..+ ..||+|||||++||++|+.+|++|+||||
T Consensus 109 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 180 (236)
T cd03267 109 DLPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEP 180 (236)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 8999999987654332 222334456778899999987666543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
|+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 181 t~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 181 TIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999998764 899999999986 46778999999984 7887654
No 241
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-36 Score=320.90 Aligned_cols=198 Identities=25% Similarity=0.377 Sum_probs=167.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1136)
+.+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 46999999999999999999999999999999999998776 9999999987653 2346799999999888899999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 001154 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1136)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~L 307 (1136)
||+.+.....+... ......++++++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99987543321100 001124678899999987777655 469
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001154 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1136)
Q Consensus 308 SGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 387 (1136)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +.+|+.++|+..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA--GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999988653 456677889999999999999999999998
Q ss_pred Eec
Q 001154 388 YQG 390 (1136)
Q Consensus 388 ~~G 390 (1136)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 242
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=8.1e-36 Score=325.06 Aligned_cols=198 Identities=26% Similarity=0.354 Sum_probs=165.1
Q ss_pred EeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHHHHH
Q 001154 845 LVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLL 924 (1136)
Q Consensus 845 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e~l~ 924 (1136)
|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.... ...+|++|++.+++.+|+.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 469999999999999999999999999999999876 46899999998764322 12489999999999999999998
Q ss_pred HHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 001154 925 FSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAA 1004 (1136)
Q Consensus 925 ~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~ 1004 (1136)
+......+ .....+..+.+.++++.+++.+..+..+ ..||||||||++|||+|+.+|++|||||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 1223344456788999999987666543 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1005 AIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1005 ~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 46788999999985 788877753
No 243
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=8.6e-36 Score=324.70 Aligned_cols=203 Identities=24% Similarity=0.329 Sum_probs=168.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhh-----CCCcceeeEEEECCccCCCCC-----CCceEEEEeccC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL-----GHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQD 218 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d 218 (1136)
++|+|+|++|++|++++|+|||||||||||++|+|.+ ++. +|+|.++|.++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 5999999999999999999999999999999999998 554 999999998865432 245799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccc
Q 001154 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1136)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~ 298 (1136)
.++ .+||+||+.++....+.... .....+++++++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhcc
Confidence 877 79999999886443211000 00122467889999998766554
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+. ...|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.++||++
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEE
Confidence 30 357999999999999999999999999999999999999999999999865 2 56777889999999999999
Q ss_pred EEEcCCeEEEecChhh
Q 001154 379 ILLSEGQIVYQGPRVS 394 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~ 394 (1136)
++|++|++++.|+.++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998754
No 244
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.5e-36 Score=345.01 Aligned_cols=200 Identities=30% Similarity=0.438 Sum_probs=166.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1136)
++++|+|++++||+.++|+|+||||||||+++|+|+++++ +|+|.+||.+..+.. +++.++||+|++.+|+ .|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6999999999999999999999999999999999999886 999999999987765 4689999999998666 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCC------cccccccc
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL------DTCADTLV 299 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL------~~~~dt~v 299 (1136)
+||||.++..- .. ++.+.++++.-|| +...||.+
T Consensus 411 ireNi~l~~~~----~s------------------------------------~e~i~~al~~a~l~~~v~~p~GLdt~i 450 (559)
T COG4988 411 IRENILLARPD----AS------------------------------------DEEIIAALDQAGLLEFVPKPDGLDTVI 450 (559)
T ss_pred HHHHhhccCCc----CC------------------------------------HHHHHHHHHHhcHHHhhcCCCcccchh
Confidence 99999986321 00 0113333333333 45779999
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
|+ ..++|||||+|||++|||++.+++++++||||++||.+|.+.|.+.|.++++ ++|+++ ++|.. +...-+|+|+
T Consensus 451 ge-~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itHrl-~~~~~~D~I~ 525 (559)
T COG4988 451 GE-GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITHRL-EDAADADRIV 525 (559)
T ss_pred cc-CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEcCh-HHHhcCCEEE
Confidence 96 5678999999999999999999999999999999999999999999999886 345544 55544 4456679999
Q ss_pred EEcCCeEEEecChhhHHH
Q 001154 380 LLSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~~ 397 (1136)
+|++|++++.|.++++.+
T Consensus 526 vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 526 VLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EecCCceeccCCHHHHhh
Confidence 999999999999998853
No 245
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-36 Score=315.26 Aligned_cols=173 Identities=61% Similarity=0.993 Sum_probs=151.3
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHH
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e 921 (1136)
+.+|+|+||++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++. ..+++.++|++|++.+++.+|++|
T Consensus 20 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~-~~~~~~i~~~~q~~~~~~~~tv~~ 98 (192)
T cd03232 20 RQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD-KNFQRSTGYVEQQDVHSPNLTVRE 98 (192)
T ss_pred eEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH-HHhhhceEEecccCccccCCcHHH
Confidence 5799999999999999999999999999999999997432246899999998764 345667999999998899999999
Q ss_pred HHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 001154 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1136)
Q Consensus 922 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~ 1001 (1136)
|+.+...+ + .||||||||++|||||+.+|++|+|||||+|||+
T Consensus 99 ~l~~~~~~-------------------~------------------~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~ 141 (192)
T cd03232 99 ALRFSALL-------------------R------------------GLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDS 141 (192)
T ss_pred HHHHHHHH-------------------h------------------cCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCH
Confidence 99864210 0 4999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 1002 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 1002 ~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
.++..+++.|+++++.|+|||++||+++.++.+.+|++++|+++|++++.|
T Consensus 142 ~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 142 QAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999877799999999998633567899999998548998865
No 246
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.1e-35 Score=322.88 Aligned_cols=202 Identities=26% Similarity=0.409 Sum_probs=168.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999998876 9999999988754332 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHh-CCcccccccccCc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-GLDTCADTLVGDE 302 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~l-gL~~~~dt~vg~~ 302 (1136)
+||+||+.+.....+ . . +....++.+++.+ +|++..++.+
T Consensus 90 ~t~~~~l~~~~~~~~--~--~--------------------------------~~~~~~~~~l~~~~~l~~~~~~~~--- 130 (222)
T cd03224 90 LTVEENLLLGAYARR--R--A--------------------------------KRKARLERVYELFPRLKERRKQLA--- 130 (222)
T ss_pred CcHHHHHHHHhhhcC--c--h--------------------------------hHHHHHHHHHHHHHhhhhhhhCch---
Confidence 999999988643221 0 0 0011245566676 4666566544
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
+.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|++++. .+++|+.++|+..++.+++|+|++|+
T Consensus 131 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 131 --GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEEEEee
Confidence 46999999999999999999999999999999999999999999999865 24566678899999999999999999
Q ss_pred CCeEEEecChhhH
Q 001154 383 EGQIVYQGPRVSV 395 (1136)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1136)
+|++++.|+.+++
T Consensus 207 ~G~i~~~~~~~~~ 219 (222)
T cd03224 207 RGRVVLEGTAAEL 219 (222)
T ss_pred CCeEEEeCCHHHH
Confidence 9999999987765
No 247
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.1e-35 Score=328.09 Aligned_cols=207 Identities=20% Similarity=0.331 Sum_probs=172.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1136)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35999999999999999999999999999999999998776 999999998775432 135699999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||.||+.+....... .+ . ......+..+++.+||.+..++.++
T Consensus 97 ~~~tv~enl~~~~~~~~~---~~------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~- 142 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---LP------A------------------------PLLHSTVMMKLEAVGLRGAAKLMPS- 142 (269)
T ss_pred CCCCHHHHHHHHHHHccC---CC------H------------------------HHHHHHHHHHHHHcCChhhhhCChh-
Confidence 999999999875321100 00 0 0011236778899999887776654
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+.+++.+++|++++|
T Consensus 143 ----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 143 ----ELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEE
Confidence 59999999999999999999999999999999999999999999998653 2456666889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999987763
No 248
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=326.77 Aligned_cols=210 Identities=22% Similarity=0.303 Sum_probs=168.3
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC-ceeEEEEEEcCccCCh---hcccceEEEeccCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-GIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~ 914 (1136)
++++.+|+|+||++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.++.. ..+++.++|++|++.++
T Consensus 12 ~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~ 91 (246)
T PRK14269 12 YGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVF 91 (246)
T ss_pred ECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCccc
Confidence 3456799999999999999999999999999999999997531 2468999999987643 23466799999998888
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+ .|++||+.+....+.... .....++.++++++.+++.+....... ..+..||||||||++|||||+.+|+||+|||
T Consensus 92 ~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllLDE 168 (246)
T PRK14269 92 V-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGGQQQRLCIARALAIKPKLLLLDE 168 (246)
T ss_pred c-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 7 699999988654331100 112334557789999998532111111 1235799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 169 P~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 225 (246)
T PRK14269 169 PTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFH-LGELIEFGES 225 (246)
T ss_pred CcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEE-CCEEEEECCH
Confidence 9999999999999999999864 899999999976 4677899999998 5799988874
No 249
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.5e-35 Score=336.21 Aligned_cols=213 Identities=21% Similarity=0.259 Sum_probs=175.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-------CceEEEEeccC--
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQD-- 218 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d-- 218 (1136)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++....+|+|.++|.++..... .+.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999987642348999999998765431 24799999997
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccc
Q 001154 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1136)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~ 298 (1136)
.+.+.+||.+++.+.......... .+...++.++|+.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~~---------------------------------~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMSK---------------------------------AEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCCH---------------------------------HHHHHHHHHHHHHcCCCChHHH-
Confidence 678999999999775432210000 0012246778999999764322
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+ +.....|||||||||+||+||+.+|++|++||||+|||..++.+|.+.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF-NTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEECCHHHHHHhCCEE
Confidence 2 34567899999999999999999999999999999999999999999999987643 567777899999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 001154 379 ILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1136)
++|++|++++.|+.+++.
T Consensus 233 ~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998875
No 250
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-35 Score=315.02 Aligned_cols=196 Identities=31% Similarity=0.580 Sum_probs=161.4
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc-eeEEEEEEcCcc
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYP 894 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 894 (1136)
.++|+|++|.++.+ .+++.+|+|+||+|++||++||+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 46788998887432 13567999999999999999999999999999999999986532 568999999987
Q ss_pred CCh--hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHH
Q 001154 895 KRQ--ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTE 972 (1136)
Q Consensus 895 ~~~--~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgG 972 (1136)
+.. ...++.++|++|++.+++.+||+||+.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 235667999999999999999999998653210 1221 2479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEe
Q 001154 973 QRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYA 1051 (1136)
Q Consensus 973 qrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~ 1051 (1136)
||||++|||||+.+|++|||||||+|||+.+++.+++.|+++.++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 677777666543357788999999985 788765
Q ss_pred C
Q 001154 1052 G 1052 (1136)
Q Consensus 1052 g 1052 (1136)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 251
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=334.78 Aligned_cols=205 Identities=25% Similarity=0.358 Sum_probs=169.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC----------------------
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF---------------------- 205 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~---------------------- 205 (1136)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999876 89999998754210
Q ss_pred -----CCCceEEEEeccC-CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchh
Q 001154 206 -----VPPRTSAYVSQQD-WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTS 279 (1136)
Q Consensus 206 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~ 279 (1136)
..++.+|||+|++ ..+...||+|||.|+....+... .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 1135799999985 34556899999998654322100 0012
Q ss_pred HHHHHHHHHhCCc-ccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCC
Q 001154 280 LVVEYIMKILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDG 358 (1136)
Q Consensus 280 ~~~~~vl~~lgL~-~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~ 358 (1136)
.+++++++.+||+ +..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3478889999996 5566544 56999999999999999999999999999999999999999999999874 2 5
Q ss_pred eEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHH
Q 001154 359 TTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 359 t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~ 396 (1136)
++|+.++|+.+++.+++|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 56777889999999999999999999999999988864
No 252
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=326.37 Aligned_cols=213 Identities=27% Similarity=0.395 Sum_probs=172.4
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1136)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999998775 999999998875432 135799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||+||+.++..... .... ...+... .....+++.+++.+||.+..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~~~---------~~~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--STWR---------SLFGLFP---------------KEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hhhh---------hhcccCc---------------HHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999987532110 0000 0000000 001234677899999987666544
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..++|++++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999987533 456666889999999999999999
Q ss_pred cCCeEEEecChhhH
Q 001154 382 SEGQIVYQGPRVSV 395 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1136)
++|++++.|+.+++
T Consensus 219 ~~G~i~~~~~~~~~ 232 (241)
T cd03256 219 KDGRIVFDGPPAEL 232 (241)
T ss_pred ECCEEEeecCHHHh
Confidence 99999999998775
No 253
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.6e-35 Score=340.79 Aligned_cols=208 Identities=23% Similarity=0.289 Sum_probs=176.0
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCc----cCCCCCC-------CceEEEE
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGH----GFKEFVP-------PRTSAYV 214 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~----~~~~~~~-------~~~~~yv 214 (1136)
....+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 3467999999999999999999999999999999999999876 999999996 3322211 2479999
Q ss_pred eccCCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccc
Q 001154 215 SQQDWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTC 294 (1136)
Q Consensus 215 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~ 294 (1136)
+|++.+++.+||+||+.|+....+... .+...+++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999998754332110 0012347888999999887
Q ss_pred ccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhh
Q 001154 295 ADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL 374 (1136)
Q Consensus 295 ~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~ 374 (1136)
.|..++ .|||||||||+|||||+.+|+||+|||||+|||+.++.++.+.|+++.+.. +++|+.++|+.+++.++
T Consensus 158 ~~~~~~-----~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKPG-----ELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHh
Confidence 776654 599999999999999999999999999999999999999999999987643 45666688999999999
Q ss_pred cCeEEEEcCCeEEEecChhhHH
Q 001154 375 FDDVILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 375 ~D~vilL~~G~iv~~G~~~~~~ 396 (1136)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999988874
No 254
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=336.95 Aligned_cols=207 Identities=18% Similarity=0.254 Sum_probs=169.1
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC-c-eeEEEEEEcCccCCh---hc----ccceEEEeccCC-
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-G-IIEGDIYISGYPKRQ---ET----FARISGYCEQND- 911 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~~- 911 (1136)
..+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.++.. .. +++.++|++|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 5799999999999999999999999999999999997642 1 468999999987642 11 224699999997
Q ss_pred -CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 912 -IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 912 -~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+.|.+|+.+++........ .....+.++.+.++++.++|.+..+..-. .+.+|||||||||+|||||+.+|+||
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~--~p~~LSgGq~QRv~iArAL~~~P~ll 175 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDV--YPHQLSGGMSQRVMIAMAIACRPKLL 175 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhC--CchhCCHHHHHHHHHHHHHHhCCCEE
Confidence 47888999988866543221 12334456678899999999753221111 23589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+||||+|||+.++..+++.|+++.+ .|.|||++|||++ .+.+.+|++++|. +|+++..|+.
T Consensus 176 ilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~-~G~ive~g~~ 238 (326)
T PRK11022 176 IADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMY-AGQVVETGKA 238 (326)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999999999976 5999999999976 4667899999998 5899999975
No 255
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=334.74 Aligned_cols=216 Identities=22% Similarity=0.383 Sum_probs=174.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-------------------CCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------------------VPP 208 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-------------------~~~ 208 (1136)
.++|+|||++|++|++++|+||||||||||+++|+|+++|. +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999876 99999999876432 124
Q ss_pred ceEEEEeccC--CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHH
Q 001154 209 RTSAYVSQQD--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIM 286 (1136)
Q Consensus 209 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl 286 (1136)
+.++||+|++ .+++ .||+||+.|+....+.. . .+...++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHH
Confidence 6799999986 4454 59999998864321110 0 00122467889
Q ss_pred HHhCCc-ccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEe
Q 001154 287 KILGLD-TCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLL 365 (1136)
Q Consensus 287 ~~lgL~-~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~ 365 (1136)
+.+||+ ...++. +..|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++... +++|++++
T Consensus 161 ~~~gL~~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~--g~Tiiivt 233 (320)
T PRK13631 161 NKMGLDDSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKAN--NKTVFVIT 233 (320)
T ss_pred HHcCCChhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEe
Confidence 999996 444443 4579999999999999999999999999999999999999999999988642 55677788
Q ss_pred cChhHHHhhcCeEEEEcCCeEEEecChhhHH---HHHHhcCCCCCC
Q 001154 366 QPAPEAYELFDDVILLSEGQIVYQGPRVSVL---DFFASMGFSCPK 408 (1136)
Q Consensus 366 q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~---~~F~~~Gf~cp~ 408 (1136)
|+.+++..++|+|++|++|++++.|+++++. ..+...|+.+|.
T Consensus 234 Hd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 234 HTMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 9999999999999999999999999998764 234445555544
No 256
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=361.51 Aligned_cols=211 Identities=22% Similarity=0.327 Sum_probs=176.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+||||+|++||++||+||||||||||+++|+|..++++.+|+|.++|.++... ..++.+||++|++.+++
T Consensus 16 ~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 95 (506)
T PRK13549 16 GGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVK 95 (506)
T ss_pred CCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC
Confidence 45679999999999999999999999999999999999876433689999999876432 13456999999998889
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.+||+||+.+....+...........+.++++++.+++.+..+..+ .+||||||||++|||||+.+|+|||||||
T Consensus 96 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEP 170 (506)
T PRK13549 96 ELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGLGQQQLVEIAKALNKQARLLILDEP 170 (506)
T ss_pred CCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999988653321111122334456889999999987766544 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCc
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1136)
|+|||+.++..+++.|++++++|.|||++||+++ .+.+.+|++++|++ |++++.|+..+.
T Consensus 171 t~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 230 (506)
T PRK13549 171 TASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGTRPAAGM 230 (506)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeeecccccC
Confidence 9999999999999999999878999999999976 46678999999984 799999887553
No 257
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.4e-35 Score=342.52 Aligned_cols=194 Identities=27% Similarity=0.399 Sum_probs=167.7
Q ss_pred eeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccCCCCCCCCcH
Q 001154 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 9999999999999999999999999999999876 468999999987532 1245679999999999999999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+||+.|+.... ...+.++.++++++.++|.+..+... ..|||||||||+|||||+.+|++|||||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998864321 11233456789999999987777653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999765 899999999986 57778999999985 799998875
No 258
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=337.06 Aligned_cols=204 Identities=25% Similarity=0.282 Sum_probs=171.3
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCC--C
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--I 912 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~ 912 (1136)
...+|+||||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.+|||+|++ .
T Consensus 27 ~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 27 LVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred ceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 3579999999999999999999999999999999999876 468999999987642 13456799999997 5
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
+.|.+|+.+++.+...... .....+.++.+.++++.++|.+ ..+.. +.+||||||||++|||||+.+|+|||
T Consensus 105 l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p~~LSgGq~QRv~iArAL~~~P~lLi 177 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----PHMFSGGQRQRIAIARALMLDPDVVV 177 (327)
T ss_pred cCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----CccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 7889999999876543321 1233445567889999999963 44443 35899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+||||++||..++..|+++|+++.++ |.|||+||||++ .+.+.+|++++|. .|++++.|+..
T Consensus 178 lDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~-~G~ive~g~~~ 240 (327)
T PRK11308 178 ADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMY-LGRCVEKGTKE 240 (327)
T ss_pred EECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 99999999999999999999999764 999999999976 3556899999998 57999999753
No 259
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=322.77 Aligned_cols=203 Identities=27% Similarity=0.390 Sum_probs=172.1
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh-cccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+.+.+|+|+|++++||++++|+|+||||||||+++|+|..+ +..|+|.++|.++... ..++.+||++|++.+++.+|
T Consensus 11 ~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (232)
T cd03300 11 GGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLT 88 (232)
T ss_pred CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcceEEEecccccCCCCc
Confidence 44579999999999999999999999999999999999876 4689999999876431 23467999999999988999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
++||+.+....+. .......+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||+|
T Consensus 89 ~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~g 160 (232)
T cd03300 89 VFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQRVAIARALVNEPKVLLLDEPLGA 160 (232)
T ss_pred HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999987654332 122333456788999999987766543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 161 LD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 161 LDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 9999999999999998764 899999999976 46788999999985 788888763
No 260
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.6e-35 Score=329.80 Aligned_cols=203 Identities=24% Similarity=0.335 Sum_probs=168.8
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh------cccceEEEeccCC--C
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE------TFARISGYCEQND--I 912 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~ 912 (1136)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... .+++.+||++|++ .
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 4679999999999999999999999999999999999876 4689999999876421 2356799999996 4
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
+.+.+|++||+.+...... .......++.+.++++.+++. ...+... ..||||||||++|||||+.+|++||
T Consensus 101 ~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~~LSgGe~qrv~laral~~~p~ill 173 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKLP-----RQLSGGQLQRINIARALAVKPKLIV 173 (265)
T ss_pred cCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 6678999999976542111 122233445678899999995 4555433 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++.++ |+|||++||+++ .+.+.+|++++|+ +|++++.|+.
T Consensus 174 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 235 (265)
T TIGR02769 174 LDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMD-KGQIVEECDV 235 (265)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEe-CCEEEEECCH
Confidence 99999999999999999999998764 899999999976 4667899999998 5799999875
No 261
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=325.34 Aligned_cols=206 Identities=28% Similarity=0.390 Sum_probs=171.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1136)
..+|+|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999998776 999999998775432 235789999999989999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc--cccccccCc
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT--CADTLVGDE 302 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~--~~dt~vg~~ 302 (1136)
||+||+.+.....+... ......+.++++.+||.+ ..++.
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~~---- 132 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADRY---- 132 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhcC----
Confidence 99999988643221100 001223678899999985 44544
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|+
T Consensus 133 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 133 -PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQEL-GKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 45699999999999999999999999999999999999999999999987532 4566668888889999999999999
Q ss_pred CCeEEEecChhhHH
Q 001154 383 EGQIVYQGPRVSVL 396 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1136)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999887653
No 262
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=330.99 Aligned_cols=202 Identities=28% Similarity=0.354 Sum_probs=169.4
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-----hcccceEEEeccCCC-CCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HSP 915 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~~ 915 (1136)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 469999999999999999999999999999999999876 468999999987631 124567999999863 334
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
..||.||+.+..... .....+..+.+.++++.+++.+..+... ..||||||||++|||||+.+|++|+||||
T Consensus 93 ~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEP 164 (275)
T PRK13639 93 APTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLSGGQKKRVAIAGILAMKPEIIVLDEP 164 (275)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 579999998764321 1223344456788999999987776653 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|+|||+.++..+++.|+++.++|.|||++||+++ .+.+.||++++|++ |++++.|+..
T Consensus 165 t~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (275)
T PRK13639 165 TSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIKEGTPK 222 (275)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999777999999999976 46678999999985 7999988753
No 263
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=326.96 Aligned_cols=219 Identities=26% Similarity=0.356 Sum_probs=172.3
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC---CceeEEEEEEcC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISG 892 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~g 892 (1136)
.+.++|+++.+ +++.+|+|+||+|++||++||+||||||||||+++|+|... +.+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~-------------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFY-------------GDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEE-------------CCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 45666665544 34569999999999999999999999999999999999742 113589999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 001154 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1136)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1136)
.++.. ..+++.+||++|++.+++ .|++||+.+....+.. .......+.++++++.+++.+....... ..+.
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 148 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLH-ESAL 148 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87632 234567999999988887 5999999886533211 1122334567788888888542111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
.|||||||||+|||||+.+|+||||||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|.+ |+
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-GK 225 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 4799999999976 46678999999985 78
Q ss_pred EEEeCCC
Q 001154 1048 LIYAGPL 1054 (1136)
Q Consensus 1048 ~~~~g~~ 1054 (1136)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14242 226 LIEVGPT 232 (253)
T ss_pred EEEeCCH
Confidence 9888864
No 264
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=329.74 Aligned_cols=203 Identities=28% Similarity=0.305 Sum_probs=170.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCC-CCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW-QVAEM 224 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 224 (1136)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5999999999999999999999999999999999998876 9999999988754321 356999999963 45678
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||+||+.|+....+... .....+++++++.+||.+..++.+.
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~---- 137 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPPY---- 137 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCChh----
Confidence 99999988643221100 0012247788999999877776654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++.. +.+|+.++|+.+++.++||+|++|++|
T Consensus 138 -~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 138 -HLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ--GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 69999999999999999999999999999999999999999999998753 456677889999999999999999999
Q ss_pred eEEEecChhhH
Q 001154 385 QIVYQGPRVSV 395 (1136)
Q Consensus 385 ~iv~~G~~~~~ 395 (1136)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 265
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2e-35 Score=323.58 Aligned_cols=203 Identities=30% Similarity=0.405 Sum_probs=172.3
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh-cccceEEEeccCCCCCCCCc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+++.+|+|+|+++.+||++||+||||||||||+++|+|..+ +..|+|.++|.++... ..++.++|++|++.+++..|
T Consensus 11 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (237)
T TIGR00968 11 GSFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLT 88 (237)
T ss_pred CCeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCc
Confidence 44679999999999999999999999999999999999876 4689999999876432 23467999999999998999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
+.||+.+....+. .......+.++++++.+++.+..+... ..||+||+||++|||+|+.+|++++|||||+|
T Consensus 89 ~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~ 160 (237)
T TIGR00968 89 VRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGA 160 (237)
T ss_pred HHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999987654331 122233456788999999977666543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 999 LDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 161 LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 215 (237)
T TIGR00968 161 LDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMS-NGKIEQIGSP 215 (237)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEE-CCEEEEecCH
Confidence 9999999999999998765 899999999976 4677899999998 5789988875
No 266
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-35 Score=326.76 Aligned_cols=215 Identities=23% Similarity=0.310 Sum_probs=173.1
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC--C-ceeEEEEEEcC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISG 892 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 892 (1136)
.+.++|+++.+ ++..+|+|+||+|++||++||+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 13 ~l~~~~l~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g 79 (260)
T PRK10744 13 KIQVRNLNFYY-------------GKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDG 79 (260)
T ss_pred eEEEEEEEEEe-------------CCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECC
Confidence 45666666544 33569999999999999999999999999999999999754 1 13689999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc----cccccccC
Q 001154 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGL 963 (1136)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~ 963 (1136)
.++.. ..+++.++|++|++.+++ .|++||+.+...... ........+.++++++.+++.. ..+.
T Consensus 80 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 152 (260)
T PRK10744 80 ENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQ---- 152 (260)
T ss_pred EEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhc----
Confidence 87631 234667999999988877 899999987643221 1223334456788999998743 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 001154 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1136)
Q Consensus 964 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~ 1043 (1136)
.+..||||||||++|||||+.+|+||||||||+|||+.++..+.+.|+++. ++.|||++||+++ .+.+.+|++++|+
T Consensus 153 -~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~ 229 (260)
T PRK10744 153 -SGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFMY 229 (260)
T ss_pred -CCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 235799999999999999999999999999999999999999999999985 4789999999976 4667899999998
Q ss_pred cCcEEEEeCCC
Q 001154 1044 RGGELIYAGPL 1054 (1136)
Q Consensus 1044 ~gG~~~~~g~~ 1054 (1136)
+ |+++..|+.
T Consensus 230 ~-G~i~~~g~~ 239 (260)
T PRK10744 230 L-GELIEFGNT 239 (260)
T ss_pred C-CEEEEeCCH
Confidence 4 799988874
No 267
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-36 Score=318.68 Aligned_cols=204 Identities=24% Similarity=0.307 Sum_probs=183.3
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccCCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIH 913 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~ 913 (1136)
...-++|+|++|+.||++.|||-||||||||+++|.++.. +..|+|+++|.++.. ..+++.++.|+|+..+
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaL 117 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFAL 117 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcc
Confidence 3456789999999999999999999999999999999877 579999999987532 1245679999999999
Q ss_pred CCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 914 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
+|+.||.||+.|+..++ .++.+++++++.++++.+||.++.+.+. ++|||||||||.|||||+.+|+||+||
T Consensus 118 lPhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMD 189 (386)
T COG4175 118 LPHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMD 189 (386)
T ss_pred ccchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEec
Confidence 99999999999998776 4667888899999999999999998764 589999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
||+|+|||--+..+++.|.++.++ ++|||++|||.+ +.++.-|||.+|+ +|+++..|.+.+
T Consensus 190 EaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 190 EAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred CchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 999999999999999999998654 899999999997 7889999999997 689999998754
No 268
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.9e-35 Score=318.65 Aligned_cols=198 Identities=24% Similarity=0.303 Sum_probs=166.2
Q ss_pred EEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-hcccceEEEeccCCCCCCCCcHHHH
Q 001154 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-ETFARISGYCEQNDIHSPGLTVLES 922 (1136)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~ltv~e~ 922 (1136)
.++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3569999999999999999999999999999999876 468999999987643 2345679999999999999999999
Q ss_pred HHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 001154 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1136)
Q Consensus 923 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~ 1002 (1136)
+.+...... .. ....+..++++++.+++.+..+... ..||+|||||++|||+|+.+|++|+|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KL-NAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Cc-cHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 986532111 11 1123455788999999977666543 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 001154 1003 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1136)
Q Consensus 1003 ~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1053 (1136)
++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|. +|+++..|+
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~-~g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVS-QGKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEE-CCeEEEecC
Confidence 999999999998764 899999999976 4667899999997 579988774
No 269
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.4e-35 Score=318.50 Aligned_cols=195 Identities=25% Similarity=0.408 Sum_probs=165.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-CCCceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-VPPRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 226 (1136)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999998776 99999999876532 123579999999988999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.+.....+. ...+++++++.+||++..++.++ .
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVK-----G 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHh-----h
Confidence 9999875432110 01236778899999877766554 5
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ . +.+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998875 3 45566678999999999999999999999
Q ss_pred EEec
Q 001154 387 VYQG 390 (1136)
Q Consensus 387 v~~G 390 (1136)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 270
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-35 Score=318.50 Aligned_cols=192 Identities=30% Similarity=0.349 Sum_probs=161.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCC-CCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDW-QVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 226 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999998876 9999999987654333467999999974 3456899
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.+.....+ ....+++++++.+||.+..++.++ .
T Consensus 90 ~e~l~~~~~~~~--------------------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (205)
T cd03226 90 REELLLGLKELD--------------------------------------AGNEQAETVLKDLDLYALKERHPL-----S 126 (205)
T ss_pred HHHHhhhhhhcC--------------------------------------ccHHHHHHHHHHcCCchhcCCCch-----h
Confidence 999987532110 001236788999999887776654 6
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++++. +.+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQ--GKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 45566688888999999999999999997
Q ss_pred E
Q 001154 387 V 387 (1136)
Q Consensus 387 v 387 (1136)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 271
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=319.20 Aligned_cols=198 Identities=26% Similarity=0.364 Sum_probs=165.2
Q ss_pred ccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccC
Q 001154 838 LEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQN 910 (1136)
Q Consensus 838 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~ 910 (1136)
.++++.+ |+||+|++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+
T Consensus 9 ~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~ 83 (214)
T cd03297 9 RLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQ 83 (214)
T ss_pred ecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecC
Confidence 3455555 99999999 9999999999999999999999876 468999999987531 1245679999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
+.+++.+|++||+.+..... .....++.++++++.+++.+..+... ..||||||||++||+||+.+|++|
T Consensus 84 ~~~~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~ll 153 (214)
T cd03297 84 YALFPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELL 153 (214)
T ss_pred CccCCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 99998999999998764321 12233456788999999976655433 479999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
+|||||+|||+.+++.+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 154 LLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999999999999765 899999999976 46678999999984 7887654
No 272
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.3e-35 Score=326.85 Aligned_cols=213 Identities=23% Similarity=0.330 Sum_probs=171.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1136)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 35999999999999999999999999999999999998776 999999998875432 245699999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||+||+.++..... ..+... .+.. ......+++++++.+||.+..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~~~---------~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 143 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWRSL---------LGRF---------------SEEDKERALSALERVGLADKAYQRA-- 143 (243)
T ss_pred ccccHHHHHhhcccccc--cchhhh---------hccc---------------cHHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 99999999987532110 000000 0000 0011234778899999987666544
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.++||++++|
T Consensus 144 ---~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 144 ---DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEE
Confidence 4699999999999999999999999999999999999999999999986533 456666888899999999999999
Q ss_pred cCCeEEEecChhhH
Q 001154 382 SEGQIVYQGPRVSV 395 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1136)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999988764
No 273
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=330.81 Aligned_cols=205 Identities=20% Similarity=0.281 Sum_probs=170.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-------CCceEEEEeccC--
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQD-- 218 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-- 218 (1136)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999876 999999999875421 245799999986
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccc
Q 001154 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADT 297 (1136)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt 297 (1136)
.+++ .||.||+.|+....+... .+...+++++++.+||. ...++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhC
Confidence 3444 699999988643211100 00122477889999996 55665
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
.+ +.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++... .+++|+.++|+.+++.+++|+
T Consensus 142 ~~-----~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dr 215 (286)
T PRK13646 142 SP-----FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADE 215 (286)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCE
Confidence 43 569999999999999999999999999999999999999999999998653 356777788999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 001154 378 VILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1136)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 274
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=324.15 Aligned_cols=209 Identities=21% Similarity=0.298 Sum_probs=168.5
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC--Cc-eeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
++..+|+|+||+|++||++||+|+||||||||+++|+|..+ +. +.+|+|.++|.++.. ..+++.++|++|++
T Consensus 15 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 94 (252)
T PRK14256 15 GKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKP 94 (252)
T ss_pred CCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCC
Confidence 34579999999999999999999999999999999999854 21 257999999987632 23567799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++.+|++||+.+....+. .....+..+.++++++.+++......... ..+..||+|||||++|||||+.+|++|+
T Consensus 95 ~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrl~laral~~~p~lll 171 (252)
T PRK14256 95 NPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAMELSGGQQQRLCIARTIAVKPEVIL 171 (252)
T ss_pred CCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999987543221 11222334567888888888542111111 1245799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.||++++|. +|+++..|+.
T Consensus 172 lDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 231 (252)
T PRK14256 172 MDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY-MGDLVECGET 231 (252)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999875 689999999976 4668899999997 5799998875
No 275
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-36 Score=317.92 Aligned_cols=222 Identities=23% Similarity=0.328 Sum_probs=193.8
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-------CceEEEEeccCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1136)
...-++|+|++|+.||++.|||-||||||||+++|.++..|+ +|+|.++|.++..... ++.+++|+|+-.
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 355789999999999999999999999999999999999886 9999999998765532 467999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 299 (1136)
++|..||.||..|+.+.+|.+.. +.+.+..+.|+..||+..++..+
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCc
Confidence 99999999999999998876531 11335788999999999888665
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
..||||+||||.|||||+.+|+||+||||+|+|||--+.++.+.|.++...+++| |+.++|+.+|++.+.|||.
T Consensus 163 -----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KT-IvFitHDLdEAlriG~rIa 236 (386)
T COG4175 163 -----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKT-IVFITHDLDEALRIGDRIA 236 (386)
T ss_pred -----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCe-EEEEecCHHHHHhccceEE
Confidence 4699999999999999999999999999999999999999999999888777555 5568999999999999999
Q ss_pred EEcCCeEEEecChhhHHHHHHhcCCCCCCCCChHHHHHhh
Q 001154 380 LLSEGQIVYQGPRVSVLDFFASMGFSCPKRKNVADFLQEV 419 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v 419 (1136)
+|.+|+|+..|++++++. .|.+.-+++|...+
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 45555566777654
No 276
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-35 Score=314.26 Aligned_cols=183 Identities=46% Similarity=0.768 Sum_probs=156.0
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC--CCCceEEEEeccCCCCCC
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~ 223 (1136)
.++.+|+|+|+.+++|++++|+|||||||||||++|+|.+++..+.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 345799999999999999999999999999999999999873223499999999987543 234679999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.++.+.. . +..
T Consensus 98 ~tv~~~l~~~~~~~---------------------------------------------------------~-----~~~ 115 (202)
T cd03233 98 LTVRETLDFALRCK---------------------------------------------------------G-----NEF 115 (202)
T ss_pred CcHHHHHhhhhhhc---------------------------------------------------------c-----ccc
Confidence 99999998742210 1 123
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
...||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++.+..+.+++++++|+.+++.+++|++++|++
T Consensus 116 ~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~ 195 (202)
T cd03233 116 VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE 195 (202)
T ss_pred hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC
Confidence 34699999999999999999999999999999999999999999999987644456777778888899999999999999
Q ss_pred CeEEEec
Q 001154 384 GQIVYQG 390 (1136)
Q Consensus 384 G~iv~~G 390 (1136)
|++++.|
T Consensus 196 G~i~~~g 202 (202)
T cd03233 196 GRQIYYG 202 (202)
T ss_pred CEEEecC
Confidence 9998765
No 277
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=329.17 Aligned_cols=215 Identities=25% Similarity=0.357 Sum_probs=175.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCC-CCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1136)
++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .++.++|++|++. .++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 5999999999999999999999999999999999999876 999999999876432 2357999999973 57778
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||.|||.++....+... .+...+++++++.+||.+..++.++
T Consensus 98 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~---- 139 (279)
T PRK13635 98 TVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREPH---- 139 (279)
T ss_pred cHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCcc----
Confidence 99999988643221100 0012347888999999887776654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++... +++|+.++|+.+++. .+|+|++|++|
T Consensus 140 -~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~-~~tilivsH~~~~~~-~~d~i~~l~~G 216 (279)
T PRK13635 140 -RLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQK-GITVLSITHDLDEAA-QADRVIVMNKG 216 (279)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHH-cCCEEEEEECC
Confidence 699999999999999999999999999999999999999999999987642 456666778888876 59999999999
Q ss_pred eEEEecChhhHHH---HHHhcCCCCC
Q 001154 385 QIVYQGPRVSVLD---FFASMGFSCP 407 (1136)
Q Consensus 385 ~iv~~G~~~~~~~---~F~~~Gf~cp 407 (1136)
++++.|+.+++.. .+...|+.+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 217 EILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred EEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 9999999887653 3334454443
No 278
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=329.42 Aligned_cols=210 Identities=25% Similarity=0.393 Sum_probs=170.2
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc------eeEEEEEEcCccCCh---hcccceEEEecc
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------IIEGDIYISGYPKRQ---ETFARISGYCEQ 909 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q 909 (1136)
++++.+|+|+||+|++||++||+||||||||||+++|+|..++. ..+|+|.++|.+... ..+++.++|++|
T Consensus 11 ~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q 90 (272)
T PRK13547 11 RRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQ 90 (272)
T ss_pred ECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecc
Confidence 34567999999999999999999999999999999999986531 127999999987532 234566899999
Q ss_pred CCCCCCCCcHHHHHHHHhhhcC-CCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHh----
Q 001154 910 NDIHSPGLTVLESLLFSAWLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELV---- 984 (1136)
Q Consensus 910 ~~~~~~~ltv~e~l~~~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~---- 984 (1136)
++..++.+|++||+.+....+. .......+..+.++++++.+++....+... ..|||||||||+|||+|+
T Consensus 91 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~~~ 165 (272)
T PRK13547 91 AAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV-----TTLSGGELARVQFARVLAQLWP 165 (272)
T ss_pred cCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcccc
Confidence 9876667999999987532111 001111233456788999999987665433 579999999999999999
Q ss_pred -----hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 985 -----ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 985 -----~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.+|++++|++ |++++.|+..
T Consensus 166 ~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 166 PHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred ccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEEecCHH
Confidence 599999999999999999999999999998765 899999999986 46678999999984 7999988753
No 279
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=327.96 Aligned_cols=220 Identities=23% Similarity=0.281 Sum_probs=173.8
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC---ceeEEEEEEcC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1136)
.+.++|+++.+ ++..+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~-------------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFY-------------GEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEE-------------CCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 46666766544 345799999999999999999999999999999999997642 13689999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 001154 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1136)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1136)
.++.. ..+++.+||++|++.+++. |+.||+.|....+.. ........+.++++++.+++.+....... ..+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87632 2345679999999888875 999999886543311 01122334567889999998542111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+...+|++++|+ +|+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~-~G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH-LGN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999865 789999999976 4667899999998 479
Q ss_pred EEEeCCC
Q 001154 1048 LIYAGPL 1054 (1136)
Q Consensus 1048 ~~~~g~~ 1054 (1136)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9988864
No 280
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=325.36 Aligned_cols=198 Identities=25% Similarity=0.351 Sum_probs=165.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1136)
++..+|+|+||+|.+||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 14 ~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~- 90 (241)
T PRK14250 14 FGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE- 90 (241)
T ss_pred CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcChHHhhhcEEEEecCchhch-
Confidence 34579999999999999999999999999999999999876 468999999987532 234567999999988876
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.|++||+.+....+ . .....+.++++.+++. +..+.. +..||||||||++|||||+.+|++|+||||
T Consensus 91 ~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEP 158 (241)
T PRK14250 91 GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSGGEAQRVSIARTLANNPEVLLLDEP 158 (241)
T ss_pred hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 69999998653221 1 1123567889999986 444443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (241)
T PRK14250 159 TSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVEYAKT 216 (241)
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEeCCH
Confidence 9999999999999999998764 999999999976 46678999999985 788888765
No 281
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=333.71 Aligned_cols=200 Identities=21% Similarity=0.297 Sum_probs=165.1
Q ss_pred EEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCC--------hhcccceEEEeccCCCC-
Q 001154 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR--------QETFARISGYCEQNDIH- 913 (1136)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~--------~~~~~~~~gyv~Q~~~~- 913 (1136)
.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++. ...+++.+||++|++..
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~ 102 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQ 102 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEccccccccccHHHHhccEEEEEeCcchh
Confidence 59999999999999999999999999999999999876 46899999998752 12345679999999742
Q ss_pred CCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 914 SPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 914 ~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
....|++||+.|..... ........+.+.++++.+++. +..+.. +..||||||||++|||||+.+|++|||
T Consensus 103 ~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlL 174 (289)
T PRK13645 103 LFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS-----PFELSGGQKRRVALAGIIAMDGNTLVL 174 (289)
T ss_pred hhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 22469999998864322 122333345677889999884 455543 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 175 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 235 (289)
T PRK13645 175 DEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE-GKVISIGSP 235 (289)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999876 4899999999976 46788999999984 789988874
No 282
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-35 Score=322.12 Aligned_cols=199 Identities=27% Similarity=0.379 Sum_probs=169.5
Q ss_pred EEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh-cccceEEEeccCCCCCCCCcHHHH
Q 001154 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLES 922 (1136)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~ltv~e~ 922 (1136)
+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|+++|.++... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999876 4689999999876431 234679999999999989999999
Q ss_pred HHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 001154 923 LLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDAR 1002 (1136)
Q Consensus 923 l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~ 1002 (1136)
+.+..... ........+.+.++++.+++.+..+..+ ..||+|||||++|||||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1222334456778999999987766543 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1003 AAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1003 ~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
++..+.+.|++++.+ |+|||++||++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998764 999999999976 46778999999985 789888874
No 283
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=6.2e-34 Score=357.09 Aligned_cols=123 Identities=25% Similarity=0.369 Sum_probs=100.8
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CEEE
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANP---SIVF 991 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p---~ill 991 (1136)
.+|+.|++.|...+. . .....+.++.++|... .+.. ...||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378888888754332 1 1123577888888753 3433 2479999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe-----cCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~-----~gG~~~~~g~~ 1054 (1136)
|||||+|||+.....+++.|+++.++|.|||+++|+++ ..+.+|+++.|. +||++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 446799999994 47999999975
No 284
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.6e-35 Score=335.87 Aligned_cols=209 Identities=20% Similarity=0.248 Sum_probs=174.5
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccC--
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD-- 218 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d-- 218 (1136)
...+|+|||++|++||+++|+|+||||||||+++|+|++.+. +|+|.++|.++.... .++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 357999999999999999999999999999999999999875 999999999876542 245799999997
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccc
Q 001154 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADT 297 (1136)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt 297 (1136)
.+++.+||.||+.+..+....... . .+...+++++++.+||. ...++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~~~--------~------------------------~~~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPKLS--------R------------------------QEVKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCC--------H------------------------HHHHHHHHHHHHHcCCChHHhcC
Confidence 578899999999886433210000 0 00123467889999994 34454
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
. ...|||||||||+||+||+.+|++|++||||+|||..++.+|.+.|+++.+.. +++++.++|+...+.+++|+
T Consensus 158 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-~~til~iTHdl~~~~~~~dr 231 (331)
T PRK15079 158 Y-----PHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREM-GLSLIFIAHDLAVVKHISDR 231 (331)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCE
Confidence 4 45799999999999999999999999999999999999999999999987643 56677789999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 001154 378 VILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1136)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999988774
No 285
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.8e-35 Score=335.82 Aligned_cols=209 Identities=21% Similarity=0.257 Sum_probs=170.9
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc-eeEEEEEEcCccCCh---hc---c-cceEEEeccCC-
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-IIEGDIYISGYPKRQ---ET---F-ARISGYCEQND- 911 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~---~~---~-~~~~gyv~Q~~- 911 (1136)
...+|+||||+|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.++.. .. + ++.++||+|++
T Consensus 28 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 107 (330)
T PRK09473 28 DVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPM 107 (330)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCch
Confidence 467999999999999999999999999999999999987531 238999999987642 11 2 24799999997
Q ss_pred -CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 912 -IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 912 -~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+.|.+|+.+++.+...... .....+..+.+.++++.++|.+..+..- ..+.+||||||||++|||||+.+|+||
T Consensus 108 ~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~--~~p~~LSgG~~QRv~IArAL~~~P~ll 183 (330)
T PRK09473 108 TSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMK--MYPHEFSGGMRQRVMIAMALLCRPKLL 183 (330)
T ss_pred hhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhc--CCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 67889999999876543332 1233445567888999999865332211 124689999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|+||||+|||+.++..+++.|+++.++ |.|||+||||++ .+.+.+|++++|. +|++++.|+..
T Consensus 184 ilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~-~G~ive~g~~~ 247 (330)
T PRK09473 184 IADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMY-AGRTMEYGNAR 247 (330)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 999999999999999999999999765 999999999976 4667899999997 58999999853
No 286
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.6e-35 Score=341.64 Aligned_cols=209 Identities=27% Similarity=0.420 Sum_probs=176.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1136)
+++|+|+|+.|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999876 999999998876533 246799999999888999
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||+||+.++..... + .+.. . ......+++++++.+||.+..++.+
T Consensus 93 tv~e~v~~~~~~~~-~-~~~~-------------~---------------~~~~~~~v~~~le~vgl~~~~~~~~----- 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR-S-RFDT-------------W---------------TETDRAAVERAMERTGVAQFADRPV----- 137 (402)
T ss_pred CHHHHHHhccchhc-c-cccC-------------C---------------CHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999988532110 0 0000 0 0011235788999999988777655
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
+.|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|+.++|+.+++.++||++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999975 3 456777889999999999999999999
Q ss_pred eEEEecChhhHH
Q 001154 385 QIVYQGPRVSVL 396 (1136)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1136)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998764
No 287
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=340.46 Aligned_cols=191 Identities=24% Similarity=0.366 Sum_probs=166.4
Q ss_pred eeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------hcccceEEEeccCCCCCCCCcH
Q 001154 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-------ETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 468999999987532 1245679999999999999999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+||+.|... ....+.++++++.+++.+..+... .+||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987531 112345788999999987776643 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 1000 DARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+..
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHH
Confidence 999999999999999765 899999999986 57788999999984 7999988753
No 288
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.9e-35 Score=323.25 Aligned_cols=205 Identities=20% Similarity=0.327 Sum_probs=171.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-----CCceEEEEeccCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQVA 222 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 222 (1136)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 35999999999999999999999999999999999998776 999999998875421 2457999999998888
Q ss_pred CCCHHHHHHHhhhh-cCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 223 EMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
.+||+||+.|+... .+... ......+.++++.+||++..+..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGASK----------------------------------EEAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChHHHhcCh--
Confidence 99999999875321 11000 001224678899999987666554
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
+.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++++. +++++.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEE--GMTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999988643 456666888899999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999987763
No 289
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=329.34 Aligned_cols=201 Identities=24% Similarity=0.341 Sum_probs=169.2
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCC-CCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPG 916 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~ 916 (1136)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++. .++.
T Consensus 21 ~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 21 ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 3569999999999999999999999999999999999876 468999999987643 235677999999974 5677
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
+|++||+.+..... .....+....++++++.+++.+..+... ..||||||||++|||||+.+|++|+|||||
T Consensus 99 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~lllLDEP~ 170 (271)
T PRK13632 99 ATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSGGQKQRVAIASVLALNPEIIIFDEST 170 (271)
T ss_pred ccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998764322 1223334456788999999987766543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||+.++..+++.|++++++ ++|||++||+++. + ..+|++++|.+ |+++..|+.
T Consensus 171 ~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~~g~~ 226 (271)
T PRK13632 171 SMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIAQGKP 226 (271)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999998766 5999999999863 4 57999999984 789888875
No 290
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.3e-35 Score=328.68 Aligned_cols=202 Identities=21% Similarity=0.307 Sum_probs=167.8
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCC--CCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI--HSPG 916 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~--~~~~ 916 (1136)
..+|+|+||+|++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.++|++|++. +++.
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 103 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNPR 103 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCchhhHhccEEEEecCchhhcCcc
Confidence 469999999999999999999999999999999999876 468999999987642 123456999999875 5678
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
+|+.+++.+....+. ........+.++++++.+++. ...+.. +..||+|||||++||+||+.+|+|||||||
T Consensus 104 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLDEP 176 (267)
T PRK15112 104 QRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLAPGQKQRLGLARALILRPKVIIADEA 176 (267)
T ss_pred hhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcCHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 899999987654331 122233445678899999994 444443 247999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|+ +|++++.|+.
T Consensus 177 t~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 234 (267)
T PRK15112 177 LASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMH-QGEVVERGST 234 (267)
T ss_pred cccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEecCCH
Confidence 9999999999999999999764 899999999986 4667799999998 5789888764
No 291
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=330.81 Aligned_cols=201 Identities=24% Similarity=0.298 Sum_probs=169.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCCC-CCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDI-HSPG 916 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~-~~~~ 916 (1136)
+.+|+||||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++. .+..
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVA 100 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeccccccHHHHhhheEEEecChhhhhcc
Confidence 469999999999999999999999999999999999876 468999999987643 234678999999974 2334
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
.|+.|++.|..... .....+.++.++++++.++|.+..+..+ ..||+|||||++|||+|+.+|++|||||||
T Consensus 101 ~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 172 (280)
T PRK13633 101 TIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSGGQKQRVAIAGILAMRPECIIFDEPT 172 (280)
T ss_pred ccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 69999998875432 1223444567889999999987776654 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+|||+.++..+.+.|+++++ .|+|||++||+++. + ..+|++++|++ |++++.|+..
T Consensus 173 ~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~-~~~d~v~~l~~-G~i~~~g~~~ 229 (280)
T PRK13633 173 AMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-A-VEADRIIVMDS-GKVVMEGTPK 229 (280)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-H-hcCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999976 49999999999873 4 45999999985 7999988753
No 292
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-35 Score=324.68 Aligned_cols=220 Identities=21% Similarity=0.262 Sum_probs=175.2
Q ss_pred ceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC---ceeEEEEEEc
Q 001154 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYIS 891 (1136)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 891 (1136)
..+.++|+++.+ +++.+|+|+||++++||++||+||||||||||+++|+|...+ .+.+|+|.++
T Consensus 19 ~~l~~~nl~~~~-------------~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (267)
T PRK14237 19 IALSTKDLHVYY-------------GKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYR 85 (267)
T ss_pred eEEEEeeEEEEE-------------CCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEEC
Confidence 346667776544 346799999999999999999999999999999999997642 1468999999
Q ss_pred CccCCh-----hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCC
Q 001154 892 GYPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGI 966 (1136)
Q Consensus 892 g~~~~~-----~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~ 966 (1136)
|.++.. ...++.+||++|++.+++ .|++||+.+...... ........+.+.++++.+++.+..+.... ..+
T Consensus 86 g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 161 (267)
T PRK14237 86 GIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAG--VKDKKVLDEIVETSLKQAALWDQVKDDLH-KSA 161 (267)
T ss_pred CEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCchhhhhhc-CCc
Confidence 987632 234567999999988877 599999987643221 11223344567888999888532211111 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCc
Q 001154 967 NGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGG 1046 (1136)
Q Consensus 967 ~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG 1046 (1136)
..||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|+ +|
T Consensus 162 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~-~G 238 (267)
T PRK14237 162 LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFY-LG 238 (267)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEE-CC
Confidence 5899999999999999999999999999999999999999999999985 4799999999986 5778899999997 57
Q ss_pred EEEEeCCC
Q 001154 1047 ELIYAGPL 1054 (1136)
Q Consensus 1047 ~~~~~g~~ 1054 (1136)
++++.|+.
T Consensus 239 ~i~~~g~~ 246 (267)
T PRK14237 239 DLIEYDKT 246 (267)
T ss_pred EEEEeCCH
Confidence 99998875
No 293
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.3e-35 Score=320.97 Aligned_cols=205 Identities=34% Similarity=0.516 Sum_probs=164.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1136)
+++|+|+|++|++||+++|+||||||||||+++|+|.+++..+.+|+|.++|.++.....++.++|++|++.+++.+||+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 99 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVR 99 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcHH
Confidence 56999999999999999999999999999999999998721123999999998775433457799999999989999999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHH-HHHHhCCcccccccccCccCCC
Q 001154 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEY-IMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
||+.|+........... . .....++. .++.+++.+..++.+ +.
T Consensus 100 enl~~~~~~~~~~~~~~---~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 143 (226)
T cd03234 100 ETLTYTAILRLPRKSSD---A----------------------------IRKKRVEDVLLRDLALTRIGGNLV-----KG 143 (226)
T ss_pred HHHHHHHHhhcccccch---H----------------------------HHHHHHHHHHHHhhcchhhhcccc-----cC
Confidence 99998654322110000 0 00112344 788888876665544 56
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecCh-hHHHhhcCeEEEEcCCe
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPA-PEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~-~~~~~~~D~vilL~~G~ 385 (1136)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. +.|+++ ++|.. .++.+++|++++|++|+
T Consensus 144 LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~tiii-~sh~~~~~~~~~~d~i~~l~~G~ 221 (226)
T cd03234 144 ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NRIVIL-TIHQPRSDLFRLFDRILLLSSGE 221 (226)
T ss_pred cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEE-EecCCCHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999988653 445544 55555 68999999999999999
Q ss_pred EEEec
Q 001154 386 IVYQG 390 (1136)
Q Consensus 386 iv~~G 390 (1136)
+++.|
T Consensus 222 i~~~g 226 (226)
T cd03234 222 IVYSG 226 (226)
T ss_pred EEecC
Confidence 99875
No 294
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-35 Score=332.67 Aligned_cols=213 Identities=19% Similarity=0.232 Sum_probs=172.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCc-ceeeEEEECCccCCCCCC-------CceEEEEeccC-
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP-------PRTSAYVSQQD- 218 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 218 (1136)
..+|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... .+.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999986421 348999999998765431 23699999997
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccc
Q 001154 219 -WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1136)
Q Consensus 219 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt 297 (1136)
.+.|.+||.+++....+...... ..+...+++++|+.+||++..+.
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHCCCCChHHH
Confidence 47889999999876543211000 00112347889999999752111
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
-+.....|||||||||+||+||+.+|++|++||||+|||+.++.++++.|+++.+.. +.+++.++|+...+.+++|+
T Consensus 147 --l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~-g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 147 --LDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKE-NMALVLITHDLALVAEAAHK 223 (326)
T ss_pred --HhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCE
Confidence 123456799999999999999999999999999999999999999999999987643 45677789999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 001154 378 VILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1136)
|++|++|++++.|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998875
No 295
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-35 Score=335.83 Aligned_cols=210 Identities=16% Similarity=0.210 Sum_probs=167.9
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC--ceeEEEEEEcCccCCh---hc----ccceEEEeccCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQ---ET----FARISGYCEQND 911 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~~~~---~~----~~~~~gyv~Q~~ 911 (1136)
...+|+||||+|++||++||+|+||||||||+++|+|...+ .+.+|+|.++|.++.. .. +++.++||+|++
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~ 98 (330)
T PRK15093 19 WVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEP 98 (330)
T ss_pred CEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCc
Confidence 46799999999999999999999999999999999998642 2468999999987532 11 234699999997
Q ss_pred C--CCCCCcHHHHHHHHhhhcCCCc---ccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 001154 912 I--HSPGLTVLESLLFSAWLRLPSE---IELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1136)
Q Consensus 912 ~--~~~~ltv~e~l~~~~~lr~~~~---~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~ 986 (1136)
. +.|.+||.+++.+......... ....+.++.+.++++.++|.+..+.... .+.+|||||||||+|||||+.+
T Consensus 99 ~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~--~p~~LSgG~~QRv~iArAL~~~ 176 (330)
T PRK15093 99 QSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS--FPYELTEGECQKVMIAIALANQ 176 (330)
T ss_pred chhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC--CchhCCHHHHHHHHHHHHHHCC
Confidence 5 5688999999976422110000 0112334567899999999753321111 2358999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+||||||||+|||+.++..++++|+++.++ |.|||+||||++ .+.+.+|++++|. +|++++.|+.
T Consensus 177 P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~vm~-~G~ive~g~~ 243 (330)
T PRK15093 177 PRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINVLY-CGQTVETAPS 243 (330)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999999999864 999999999976 4667899999998 5899999975
No 296
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=328.52 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=169.1
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCC-CCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1136)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. +++..
T Consensus 22 ~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 22 SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 358999999999999999999999999999999999876 468999999987642 245667999999974 67788
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|+.+|+.|..... ........+.++++++.+++.+..+... ..||+|||||++|||||+.+|++|||||||+
T Consensus 100 ~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~lllLDEPt~ 171 (269)
T PRK13648 100 IVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSGGQKQRVAIAGVLALNPSVIILDEATS 171 (269)
T ss_pred cHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998864322 1223334456788999999987666543 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
|||+.++..+++.|++++++ |+|||++||+++ ++. .+|++++|+ +|++++.|+..
T Consensus 172 ~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~-~G~i~~~g~~~ 227 (269)
T PRK13648 172 MLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMN-KGTVYKEGTPT 227 (269)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEE-CCEEEEecCHH
Confidence 99999999999999998764 899999999986 354 499999998 47999988753
No 297
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.3e-35 Score=318.23 Aligned_cols=201 Identities=28% Similarity=0.353 Sum_probs=163.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccC--CC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--WQ 220 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 220 (1136)
++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999998776 999999999875432 245799999998 45
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLV 299 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~v 299 (1136)
++.+||+||+.+.....+.... + + ......+.+++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~-~--------~-----------------------~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK-K--------E-----------------------ARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH-H--------H-----------------------HHHHHHHHHHHHCCCChhHhhCCc
Confidence 6789999999876433211000 0 0 0011135678889985 4555544
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..++|+|+
T Consensus 144 -----~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 -----HELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEEL-GLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEE
Confidence 4699999999999999999999999999999999999999999999987532 4566668888889999999999
Q ss_pred EEcCCeEEEec
Q 001154 380 LLSEGQIVYQG 390 (1136)
Q Consensus 380 lL~~G~iv~~G 390 (1136)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 298
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=318.46 Aligned_cols=170 Identities=25% Similarity=0.302 Sum_probs=133.2
Q ss_pred eEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHHHHHHHh
Q 001154 848 VTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLESLLFSA 927 (1136)
Q Consensus 848 vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~ 927 (1136)
=.++|+.||+++++||||-||||+.++|+|... +.+|. .. .-.++|=||--.-....||.+.|.-..
T Consensus 360 ~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~ 426 (591)
T COG1245 360 EEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAI 426 (591)
T ss_pred cCCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhh
Confidence 346788999999999999999999999999776 34665 11 124678888644445679999775332
Q ss_pred hhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHH
Q 001154 928 WLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIV 1007 (1136)
Q Consensus 928 ~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i 1007 (1136)
.-+... .-...++++-|.|.++.+..+ .+|||||.|||+||.+|.++.++.+||||++.||.+.+..+
T Consensus 427 ~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~v 494 (591)
T COG1245 427 RSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIV 494 (591)
T ss_pred hhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHH
Confidence 211111 123467888889988888765 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEe
Q 001154 1008 MRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1136)
Q Consensus 1008 ~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~ 1043 (1136)
-++||++.. .++|.+++-||..+ +--..|+++|..
T Consensus 495 akvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 495 AKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999975 58999999999753 333468888875
No 299
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-35 Score=327.78 Aligned_cols=218 Identities=22% Similarity=0.270 Sum_probs=171.6
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC---ceeEEEEEEcC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1136)
.+.++|+++.+ ++..+|+|+||+|++||++||+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~-------------~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISY-------------GTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEE-------------CCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 46666665544 345799999999999999999999999999999999997542 13689999999
Q ss_pred ccCC-----hhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 001154 893 YPKR-----QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1136)
Q Consensus 893 ~~~~-----~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1136)
.++. ...+++.++|++|++.+++ .|++||+.+.+..+. .. ....+.++++++.+++........ ...+.
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 153 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKL-NESGY 153 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhh-CCCcc
Confidence 8753 2234567999999998887 499999988654331 11 122345677888887642111111 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec---
Q 001154 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR--- 1044 (1136)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~--- 1044 (1136)
.||+|||||++|||||+.+|++|||||||+|||+.++..+++.|++++ +++|||++||+++ ++.+.+|++++|++
T Consensus 154 ~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~i~~l~~~~~ 231 (269)
T PRK14259 154 SLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK-KNFTIVIVTHNMQ-QAVRVSDMTAFFNAEEV 231 (269)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhcCEEEEEecccc
Confidence 799999999999999999999999999999999999999999999985 4799999999986 57788999999985
Q ss_pred -------CcEEEEeCCC
Q 001154 1045 -------GGELIYAGPL 1054 (1136)
Q Consensus 1045 -------gG~~~~~g~~ 1054 (1136)
+|++++.|+.
T Consensus 232 ~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 232 EGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccceEEEeCCH
Confidence 3678888875
No 300
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5.7e-35 Score=316.96 Aligned_cols=196 Identities=20% Similarity=0.332 Sum_probs=161.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-------CceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999998876 9999999988754322 1469999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++.+||+||+.+......... .+....+.++++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999988543211000 001123677899999987666654
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++.. +.+|+.++|+..++. .+|++++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL-NTSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHh-hcCEEEE
Confidence 4699999999999999999999999999999999999999999999987543 345566778777775 4799999
Q ss_pred EcCCeEE
Q 001154 381 LSEGQIV 387 (1136)
Q Consensus 381 L~~G~iv 387 (1136)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999975
No 301
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.3e-35 Score=320.26 Aligned_cols=206 Identities=25% Similarity=0.386 Sum_probs=170.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC--CceEEEEeccCCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP--PRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 225 (1136)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999998876 9999999987754321 257999999988888999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.+.....+... ......++++++.+||++..++.++
T Consensus 91 ~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----
Confidence 9999987543221000 0011236778899999877776654
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++++.++|..+++.. +|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~-~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIEA-DDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHhh-CCEEEEEeCCe
Confidence 599999999999999999999999999999999999999999999987533 4556667788888864 99999999999
Q ss_pred EEEecChhhHHH
Q 001154 386 IVYQGPRVSVLD 397 (1136)
Q Consensus 386 iv~~G~~~~~~~ 397 (1136)
+++.|+.+++..
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999998877643
No 302
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.3e-35 Score=365.71 Aligned_cols=206 Identities=26% Similarity=0.400 Sum_probs=165.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1136)
++|+|+|++|+||+.++|+||||||||||+++|+|.+ |. +|+|.+||.++.+... ++.++||+|++++|. .|
T Consensus 364 ~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~T 438 (588)
T PRK11174 364 TLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-GT 438 (588)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-cC
Confidence 5999999999999999999999999999999999998 65 8999999999877653 578999999999776 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+|||.++.. ....+.+.++++. . ..++.+ -.|++..||.||+. ..
T Consensus 439 I~eNI~~g~~----~~~~eei~~al~~------------------a---------~l~~~i--~~lp~G~dT~vge~-G~ 484 (588)
T PRK11174 439 LRDNVLLGNP----DASDEQLQQALEN------------------A---------WVSEFL--PLLPQGLDTPIGDQ-AA 484 (588)
T ss_pred HHHHhhcCCC----CCCHHHHHHHHHH------------------h---------CHHHHH--HhcccccccccccC-CC
Confidence 9999988521 1111111111110 0 012222 23667889999976 45
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
+||||||||++||||++.+|+||+||||||+||+.++..|.+.|+++.+ ++|+|+ ++|.. +....||+|++|++|+
T Consensus 485 ~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIi-ItHrl-~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 485 GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLM-VTHQL-EDLAQWDQIWVMQDGQ 560 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEE-EecCh-HHHHhCCEEEEEeCCe
Confidence 7999999999999999999999999999999999999999999988743 455555 55554 4567799999999999
Q ss_pred EEEecChhhHHH
Q 001154 386 IVYQGPRVSVLD 397 (1136)
Q Consensus 386 iv~~G~~~~~~~ 397 (1136)
++..|+.+++.+
T Consensus 561 i~e~G~~~eL~~ 572 (588)
T PRK11174 561 IVQQGDYAELSQ 572 (588)
T ss_pred EeecCCHHHHHh
Confidence 999999998864
No 303
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=4.4e-35 Score=323.92 Aligned_cols=205 Identities=21% Similarity=0.313 Sum_probs=170.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-----------CCCceEEEEecc
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----------VPPRTSAYVSQQ 217 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-----------~~~~~~~yv~Q~ 217 (1136)
.+|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++... ..++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5999999999999999999999999999999999998775 99999999876532 123579999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccc
Q 001154 218 DWQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADT 297 (1136)
Q Consensus 218 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt 297 (1136)
+.+++.+||+||+.++..... +.. . ......++.+++.+||++..|+
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~-~~~-----~---------------------------~~~~~~~~~~l~~~gl~~~~~~ 140 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVK-GEP-----K---------------------------EEATARARELLAKVGLAGKETS 140 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhc-CCC-----H---------------------------HHHHHHHHHHHHHcCCcchhhC
Confidence 988989999999987532110 000 0 0012236778899999877665
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
.+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++... +.+|+.++|+.+++.+++|+
T Consensus 141 ~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tvi~~tH~~~~~~~~~d~ 213 (250)
T PRK11264 141 YP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQE--KRTMVIVTHEMSFARDVADR 213 (250)
T ss_pred Ch-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHhcCE
Confidence 54 469999999999999999999999999999999999999999999988653 45566688999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 001154 378 VILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1136)
+++|++|++++.|+.+++.
T Consensus 214 i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 214 AIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999987763
No 304
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=329.58 Aligned_cols=202 Identities=23% Similarity=0.300 Sum_probs=168.9
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCce-eEEEEEEcCccCCh---hcccceEEEeccCCC-CCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGI-IEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPG 916 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~ 916 (1136)
..+|+||||+|++||++||+||||||||||+++|+|..++.. ..|+|.++|.++.. ...++.+||++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 469999999999999999999999999999999999865321 13999999987643 234567999999974 5677
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
.||+||+.|....+ ....++..+.++++++.++|.+..+... ..||+|||||++||+||+.+|++|+|||||
T Consensus 100 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~G~~qrv~laral~~~P~llllDEPt 171 (282)
T PRK13640 100 ATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLSGGQKQRVAIAGILAVEPKIIILDEST 171 (282)
T ss_pred CCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCc
Confidence 89999998764322 1233444566888999999987766543 589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 997 SGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||+.++..+++.|++++++ |+|||++||+++. + +.+|++++|+ +|++++.|+.
T Consensus 172 ~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~-~G~i~~~g~~ 227 (282)
T PRK13640 172 SMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLD-DGKLLAQGSP 227 (282)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999764 9999999999763 4 5799999998 5799998875
No 305
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3.4e-35 Score=311.51 Aligned_cols=171 Identities=54% Similarity=0.916 Sum_probs=151.5
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCC--CCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcH
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRK--TGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.++.....++.++|++|++.+++.+|+
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t~ 99 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLTV 99 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCEeCchHhhhheEEEccCcccCCCCCcH
Confidence 56999999999999999999999999999999999987 5 5689999999987654556789999999988899999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+||+.+...++ .||+|||||++|||||+.+|++|+|||||+||
T Consensus 100 ~~~i~~~~~~~-------------------------------------~LS~G~~qrv~laral~~~p~illlDEP~~~L 142 (194)
T cd03213 100 RETLMFAAKLR-------------------------------------GLSGGERKRVSIALELVSNPSLLFLDEPTSGL 142 (194)
T ss_pred HHHHHHHHHhc-------------------------------------cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCC
Confidence 99997642100 49999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
|+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 143 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 143 DSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 999999999999998777999999999986457778999999985 7887654
No 306
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=323.44 Aligned_cols=207 Identities=23% Similarity=0.284 Sum_probs=166.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.++.. ...++.+||++|++
T Consensus 15 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 94 (251)
T PRK14270 15 GEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKP 94 (251)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCC
Confidence 3457999999999999999999999999999999999975421 258999999987632 23456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+++ .|++||+.|....... .......+.++++++.+++.+ +.+.. . ..+..||+|||||++|||+|+.+|+||
T Consensus 95 ~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~-~~~~~LS~G~~qrv~laral~~~p~ll 169 (251)
T PRK14270 95 NPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDL-K-KSALKLSGGQQQRLCIARTIAVKPDVI 169 (251)
T ss_pred CcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHh-h-CCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 8887 8999999876533211 112233456778899988742 11111 1 123579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 170 llDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 230 (251)
T PRK14270 170 LMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL-MGDLIEFNKT 230 (251)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE-CCeEEEeCCH
Confidence 99999999999999999999999875 689999999976 5678899999997 5789998875
No 307
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-35 Score=317.21 Aligned_cols=196 Identities=29% Similarity=0.447 Sum_probs=166.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC--CCceEEEEeccCCCCCCCCH
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--PPRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 226 (1136)
++|+|+|+++++| +++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 6999999999999 99999999999999999999998876 999999998765422 24579999999998999999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.+.....+... .+....++.+++.+||++..++.++ .
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKIG-----S 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCchh-----h
Confidence 999987543321100 0012236788999999887776654 5
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ + ++++.++|+.+++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998864 3 5677788999999999999999999999
Q ss_pred EEec
Q 001154 387 VYQG 390 (1136)
Q Consensus 387 v~~G 390 (1136)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 308
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=323.46 Aligned_cols=209 Identities=21% Similarity=0.296 Sum_probs=166.8
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC--c-eeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|.++.. ..+++.++|++|++
T Consensus 16 ~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 95 (251)
T PRK14244 16 GSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKP 95 (251)
T ss_pred CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCc
Confidence 346799999999999999999999999999999999997541 1 358999999987532 13466799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++. |++||+.+....+.. .......++.++++++.+++.+....... ..+..||||||||++|||+|+.+|+|||
T Consensus 96 ~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lll 172 (251)
T PRK14244 96 NPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLK-DSAFELSGGQQQRLCIARAIAVKPTMLL 172 (251)
T ss_pred ccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhh-cChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88875 999999876433211 11122334567888999998642111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 173 lDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 173 MDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999985 4899999999976 46678999999985 799988864
No 309
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=321.09 Aligned_cols=196 Identities=24% Similarity=0.313 Sum_probs=165.6
Q ss_pred eeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh-cccceEEEeccCCCCCCCCcHHHHHHH
Q 001154 847 NVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE-TFARISGYCEQNDIHSPGLTVLESLLF 925 (1136)
Q Consensus 847 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~ltv~e~l~~ 925 (1136)
||||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999876 4689999999875432 124579999999999999999999987
Q ss_pred HhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 001154 926 SAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAA 1005 (1136)
Q Consensus 926 ~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~ 1005 (1136)
...... .. ....++.++++++.+++.+..+... ..||||||||++|||||+.+|++|+|||||+|||+.++.
T Consensus 95 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPGL--KL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred cccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 532111 11 1233456888999999987766654 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1006 IVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1006 ~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
.+.+.|+++.++ |+|||++||++. ++.+.+|++++|.+ |++++.|+.
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999998754 899999999976 46678999999984 799998875
No 310
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=324.46 Aligned_cols=208 Identities=23% Similarity=0.290 Sum_probs=166.5
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC--Cc-eeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||+|++||++||+|+||||||||+++|+|... +. +.+|+|.++|.++.. ...++.+||++|++
T Consensus 23 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 102 (259)
T PRK14274 23 GQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKG 102 (259)
T ss_pred CCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCC
Confidence 34579999999999999999999999999999999999754 21 147999999987632 23456799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++. |++||+.|....+.. ....+..+.++++++.+++.+....... ..+.+||||||||++|||+|+.+|+|||
T Consensus 103 ~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~LS~Gq~qrv~laral~~~p~lll 178 (259)
T PRK14274 103 NPFPQ-SIFDNVAYGPRIHGT--KNKKKLQEIVEKSLKDVALWDEVKDRLH-TQALSLSGGQQQRLCIARALATNPDVLL 178 (259)
T ss_pred ccccc-CHHHHHHhHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88875 999999876433211 1223334557788888887532111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 179 lDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 238 (259)
T PRK14274 179 MDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY-MGELVECNDT 238 (259)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999864 799999999986 4677899999997 5899998875
No 311
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=330.35 Aligned_cols=207 Identities=20% Similarity=0.228 Sum_probs=174.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccC--C
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 219 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 219 (1136)
+.+|+|||++|++||+++|+|+||||||||+++|+|.+.+. +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999998775 899999999876542 245799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc-ccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTL 298 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~-~~dt~ 298 (1136)
+.+.+||.+++.+..+......+ .+...++.++|+.+||+. .+++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLSA---------------------------------AERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCCH---------------------------------HHHHHHHHHHHHHCCCChHHhcCC
Confidence 78889999999775433210000 001234788999999963 55554
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
...|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+.. +++++.++|+...+..++|+|
T Consensus 152 -----p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 -----PHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQEL-GLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred -----CccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999987643 566777899999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 001154 379 ILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1136)
++|++|++++.|+.+++.
T Consensus 226 ~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999998875
No 312
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-35 Score=325.77 Aligned_cols=205 Identities=26% Similarity=0.358 Sum_probs=169.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCC-CCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999998876 999999999875432 2457999999974 5778
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.+.....+... .+...+++++++.+||.+..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 999999987543211000 001224778899999988777655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++. ++++|+.++|..+++. .+|++++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998753 3355666677777774 7999999999
Q ss_pred CeEEEecChhhHH
Q 001154 384 GQIVYQGPRVSVL 396 (1136)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1136)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999887654
No 313
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.7e-35 Score=356.13 Aligned_cols=210 Identities=26% Similarity=0.353 Sum_probs=175.5
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHS 914 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~ 914 (1136)
++++.+|+|+||+|.+||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|++.++
T Consensus 14 ~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (501)
T PRK10762 14 FPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLI 91 (501)
T ss_pred eCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHhCCEEEEEcchhcc
Confidence 345679999999999999999999999999999999999876 4689999999875321 1245699999999899
Q ss_pred CCCcHHHHHHHHhhhcCC-CcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 915 PGLTVLESLLFSAWLRLP-SEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~-~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
+.+||+|++.|....+.. ......+.++.++++++.+++.+..+..+ ..||||||||++|||||+.+|++||||
T Consensus 92 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLD 166 (501)
T PRK10762 92 PQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSIGEQQMVEIAKVLSFESKVIIMD 166 (501)
T ss_pred CCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999886432210 11122334456789999999987766544 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCc
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1136)
|||+|||+.++..+++.|+++++.|.|||++|||++ ++...||++++|++ |+++..|+..+.
T Consensus 167 EPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~~ 228 (501)
T PRK10762 167 EPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAEREVADL 228 (501)
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEecCcCcC
Confidence 999999999999999999999877999999999986 46778999999984 799998887653
No 314
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=6.9e-35 Score=319.04 Aligned_cols=202 Identities=25% Similarity=0.315 Sum_probs=167.2
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC--CCCceEEEEe-ccCCCCC
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF--VPPRTSAYVS-QQDWQVA 222 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~ 222 (1136)
..+++|+|+|+.|++|++++|+|||||||||||++|+|.++|. +|+|.++|.+.... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 3457999999999999999999999999999999999998876 99999999865332 2245799998 5566778
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
.+||+|++.+.....+... .+....++.+++.+||++..|+.++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-- 152 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVR-- 152 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChh--
Confidence 8999999988543321100 0011236778899999988887664
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|.
T Consensus 153 ---~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 153 ---QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRER-GTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHHhCCEEEEEe
Confidence 599999999999999999999999999999999999999999999987543 4566668888889999999999999
Q ss_pred CCeEEEec
Q 001154 383 EGQIVYQG 390 (1136)
Q Consensus 383 ~G~iv~~G 390 (1136)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 315
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-35 Score=315.26 Aligned_cols=215 Identities=22% Similarity=0.310 Sum_probs=179.3
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC-C-CcceeeEEEECCccCCCCCC-------CceEEEEecc
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG-H-HLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQ 217 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 217 (1136)
...+++||||.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.|+|.++-.... .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 3 34568999999997654432 3579999999
Q ss_pred C--CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccc
Q 001154 218 D--WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCA 295 (1136)
Q Consensus 218 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~ 295 (1136)
+ .+-|.+||.+.+.-..+.+.... ...+...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 6 57888999998865544321100 0011234578899999998642
Q ss_pred cccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhc
Q 001154 296 DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELF 375 (1136)
Q Consensus 296 dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~ 375 (1136)
. +-+.+...|||||||||.||.||+.+|++|+.||||++||..++.+|++.|+++.++ .+++++.++|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e-~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQRE-KGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhc
Confidence 1 234667789999999999999999999999999999999999999999999999875 4677888999999999999
Q ss_pred CeEEEEcCCeEEEecChhhHH
Q 001154 376 DDVILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 376 D~vilL~~G~iv~~G~~~~~~ 396 (1136)
|+|+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999998874
No 316
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=4.5e-35 Score=319.44 Aligned_cols=201 Identities=25% Similarity=0.324 Sum_probs=165.0
Q ss_pred EEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc--eeEEEEEEcCccCChhcc-cceEEEeccCCC--CCCCCc
Q 001154 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG--IIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPGLT 918 (1136)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lt 918 (1136)
+|+|+|+++++|++++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 468999999999999999999999999999999987620 168999999987654322 357999999974 556789
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc---cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS---LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~---~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
+.|++.+....... .....++.++++++.+++.+ ..+.. +..|||||||||+|||||+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999775432211 12333456889999999973 33433 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|+ +|+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMD-DGRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999998764 899999999986 5667899999997 4799988864
No 317
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-35 Score=291.13 Aligned_cols=206 Identities=25% Similarity=0.345 Sum_probs=178.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1136)
..+|+|+|+.|.+|+.++++||||||||||||++||...|. .|+|.+||.+++-. ...-|.|+|++.++|=+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 56999999999999999999999999999999999999886 99999999987642 33459999999999999999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 001154 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1136)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~L 307 (1136)
+|+.|+.++.|..+. .+ ..++.+.+...||+...+.. +-.|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~~~-----i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEHKY-----IWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCcccccccc-----eEee
Confidence 999999998876532 11 22477888999999876654 4579
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC--Ce
Q 001154 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE--GQ 385 (1136)
Q Consensus 308 SGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~--G~ 385 (1136)
||||||||.|||||..+|+.|+||||+.+||+-++.++.+.|-++.+..+ ..++.++|+.+|+.-+++++++|+- |+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tg-k~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETG-KQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhC-CeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 99999999999999999999999999999999999999999998887655 4455688999999999999999985 89
Q ss_pred EEEecChhhHHHH
Q 001154 386 IVYQGPRVSVLDF 398 (1136)
Q Consensus 386 iv~~G~~~~~~~~ 398 (1136)
|+..-+.+-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9988777655444
No 318
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-35 Score=322.70 Aligned_cols=208 Identities=24% Similarity=0.303 Sum_probs=164.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC--C-ceeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||+|++||++||+||||||||||+++|+|... + .+.+|+|.++|.++.. ..+++.++|++|++
T Consensus 16 ~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 95 (252)
T PRK14239 16 NKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQP 95 (252)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCC
Confidence 34579999999999999999999999999999999999732 2 1247999999987632 23456799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++ .|++||+.+....+.. ......++.++++++.+++.+....... ..+..||+|||||++|||||+.+|+|||
T Consensus 96 ~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lll 171 (252)
T PRK14239 96 NPFP-MSIYENVVYGLRLKGI--KDKQVLDEAVEKSLKGASIWDEVKDRLH-DSALGLSGGQQQRVCIARVLATSPKIIL 171 (252)
T ss_pred ccCc-CcHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCchhHHHHHh-cCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8877 8999999876433211 1122234557788888887431111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 172 lDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T PRK14239 172 LDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GDLIEYNDT 231 (252)
T ss_pred EcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999864 699999999976 57788999999984 789998875
No 319
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-35 Score=321.75 Aligned_cols=207 Identities=24% Similarity=0.318 Sum_probs=165.2
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh-----hcccceEEEeccCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1136)
++.+|+|+||+|++||++||+||||||||||+++|+|..++. +.+|+|.++|.++.. ...++.++|++|++.
T Consensus 15 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 94 (250)
T PRK14240 15 DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPN 94 (250)
T ss_pred CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCc
Confidence 457999999999999999999999999999999999964321 258999999987642 234567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
+++ .|++||+.+....+.. ......++.++++++.+++.+....... ..+..||||||||++|||||+.+|++|+|
T Consensus 95 ~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~llll 170 (250)
T PRK14240 95 PFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLK-KSALGLSGGQQQRLCIARALAVEPEVLLM 170 (250)
T ss_pred cCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHh-cCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 887 8999999886533211 1122344567788888877421111111 12357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||+|||+.++..+.+.|+++. +++|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 171 DEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (250)
T PRK14240 171 DEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFLN-GEIVEFGDT 229 (250)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999985 4899999999976 46778999999985 789888864
No 320
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=8.1e-35 Score=315.33 Aligned_cols=195 Identities=28% Similarity=0.418 Sum_probs=165.8
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCCCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQNDIHSP 915 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~~~~ 915 (1136)
..+|+|+||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLG 95 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcC
Confidence 679999999999999999999999999999999999876 468999999987632 134578999999999998
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.+|+.||+.+...... .....+....+.++++.+++.+..+... ..||+|||||++|||+|+.+|++|+||||
T Consensus 96 ~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrv~laral~~~p~illlDEP 168 (220)
T TIGR02982 96 FLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLSGGQKQRVAIARALVHRPKLVLADEP 168 (220)
T ss_pred CCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 8999999988654321 1223344556889999999977666543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEE
Q 001154 996 TSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGEL 1048 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~ 1048 (1136)
|+|||+.++..+.+.|+++.+ .|+|||++||+++ ..+.+|++++|.+ |++
T Consensus 169 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 169 TAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 999999999999999999876 5899999999975 4578999999975 554
No 321
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-35 Score=356.19 Aligned_cols=209 Identities=27% Similarity=0.321 Sum_probs=174.0
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHS 914 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~ 914 (1136)
++++.+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++|.++... ..++.+||++|++.++
T Consensus 15 ~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~ 92 (510)
T PRK09700 15 FGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINYNKLDHKLAAQLGIGIIYQELSVI 92 (510)
T ss_pred cCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEECCCCCHHHHHHCCeEEEeeccccc
Confidence 345679999999999999999999999999999999999876 4689999999876431 1235699999999899
Q ss_pred CCCcHHHHHHHHhhhc----CCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 915 PGLTVLESLLFSAWLR----LPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr----~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
+.+||+||+.+..... ........+.++.++++++.+++.+..+..+ .+|||||||||+|||||+.+|+||
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~ll 167 (510)
T PRK09700 93 DELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----ANLSISHKQMLEIAKTLMLDAKVI 167 (510)
T ss_pred CCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999998753211 1000122334456888999999987666554 479999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
||||||+|||+.++..+++.|++++++|.|||++||+++ .+...+|++++|+ +|++++.|+..+
T Consensus 168 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~-~G~i~~~g~~~~ 231 (510)
T PRK09700 168 IMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMK-DGSSVCSGMVSD 231 (510)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEeeecchhh
Confidence 999999999999999999999999878999999999976 4667899999998 579999987654
No 322
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=9.9e-35 Score=315.06 Aligned_cols=200 Identities=24% Similarity=0.329 Sum_probs=163.6
Q ss_pred ccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCC
Q 001154 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQND 911 (1136)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~ 911 (1136)
+.+.++.++++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+..
T Consensus 25 ~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~ 93 (224)
T cd03220 25 ILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGG 93 (224)
T ss_pred hhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccc
Confidence 3445556778899999999999999999999999999999999999876 468999999976421 11123
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+.+.+||+||+.+....+. ......++.++++++.+++.+..+..+ ..||||||||++|||+|+.+|++||
T Consensus 94 ~~~~~~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~lll 165 (224)
T cd03220 94 GFNPELTGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILL 165 (224)
T ss_pred cCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 44577899999987654321 122334456788899999987766544 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|. +|++++.|
T Consensus 166 lDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g 224 (224)
T cd03220 166 IDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLE-KGKIRFDG 224 (224)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEecC
Confidence 99999999999999999999998777899999999976 4667799999997 47887654
No 323
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-36 Score=298.09 Aligned_cols=215 Identities=24% Similarity=0.368 Sum_probs=186.7
Q ss_pred ccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEec
Q 001154 832 LKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCE 908 (1136)
Q Consensus 832 ~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~ 908 (1136)
+++.++.++.+.+|+++|..|++|.+++|+|||||||||||.+++++.. ..+|+|+++|.++.. ..+++.++..-
T Consensus 4 i~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILk 81 (252)
T COG4604 4 IENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILK 81 (252)
T ss_pred ehhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHH
Confidence 4455667788999999999999999999999999999999999998766 568999999988643 45677888899
Q ss_pred cCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 001154 909 QNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1136)
Q Consensus 909 Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1136)
|+......+||+|-+.|+..-.. ......+.+..++++++.++|.++.|+.. .+||||||||.-||+.|+++.+
T Consensus 82 Q~N~i~~rlTV~dLv~FGRfPYS-qGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTd 155 (252)
T COG4604 82 QENHINSRLTVRDLVGFGRFPYS-QGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTD 155 (252)
T ss_pred hhchhhheeEHHHHhhcCCCccc-CCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCc
Confidence 98888889999999999743221 22234566778999999999999999875 4799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
.++||||.++||......+|+.||+++++ |+|||++.||.++ ..-.+|+++-|+ +|+++..|+..+
T Consensus 156 yvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK-~G~vv~~G~~~e 222 (252)
T COG4604 156 YVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALK-NGKVVKQGSPDE 222 (252)
T ss_pred EEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeec-CCEEEecCCHHH
Confidence 99999999999999999999999999876 9999999999875 455679999998 589999999754
No 324
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5.1e-35 Score=315.75 Aligned_cols=194 Identities=27% Similarity=0.397 Sum_probs=162.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1136)
..+|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35999999999999999999999999999999999998775 999999999876432 235799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||+||+.++....+... ...+..++++++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP-- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 89999999988643221100 001224678899999987666655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +++|+.++|..+++..+||++++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 136 ---EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKR--GTTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ---hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhcCEEEEe
Confidence 469999999999999999999999999999999999999999999998642 456666888899999999999999
Q ss_pred cCCe
Q 001154 382 SEGQ 385 (1136)
Q Consensus 382 ~~G~ 385 (1136)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 325
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-35 Score=319.92 Aligned_cols=206 Identities=19% Similarity=0.334 Sum_probs=171.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|+++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999998776 9999999988754322 3569999999988888
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.+..+....... .+....++.+++.+||++..+..+
T Consensus 93 ~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 135 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLSA---------------------------------EQREDRANELMEEFHIEHLRDSMG---- 135 (241)
T ss_pred CcHHHHHhhhhhcccccCH---------------------------------HHHHHHHHHHHHHcCCHHHhhcch----
Confidence 9999999875332110000 001234678899999987665544
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.++.++. . +.+|+.++|+..++.+++|++++|++
T Consensus 136 -~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 136 -QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998864 2 45666677888899999999999999
Q ss_pred CeEEEecChhhHH
Q 001154 384 GQIVYQGPRVSVL 396 (1136)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1136)
|++++.|+.+++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987763
No 326
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-35 Score=336.85 Aligned_cols=195 Identities=25% Similarity=0.405 Sum_probs=169.6
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-------CCCceEEEEeccCCCCCCCC
Q 001154 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1136)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999998876 99999999876431 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.|+.+.. ...+++++++.+||++..+..+ .
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998753100 0123678899999988777655 4
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987643 4566678899999999999999999999
Q ss_pred EEEecChhhHH
Q 001154 386 IVYQGPRVSVL 396 (1136)
Q Consensus 386 iv~~G~~~~~~ 396 (1136)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999998874
No 327
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.8e-35 Score=315.93 Aligned_cols=195 Identities=27% Similarity=0.382 Sum_probs=163.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 35999999999999999999999999999999999998776 999999998875432 235799999999989
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||+||+.+.....+.. . .+....++++++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP--P--------------------------------REIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHhhCCh--
Confidence 9999999998864332110 0 001124678899999988777655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+. +++++.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKA--GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 456666888889999999999999
Q ss_pred cCCeE
Q 001154 382 SEGQI 386 (1136)
Q Consensus 382 ~~G~i 386 (1136)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 328
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=314.68 Aligned_cols=210 Identities=22% Similarity=0.340 Sum_probs=172.1
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC---CceeEEEEEEcCccCC---hh----cccceEEEeccC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGIIEGDIYISGYPKR---QE----TFARISGYCEQN 910 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~g~~~~---~~----~~~~~~gyv~Q~ 910 (1136)
...+++||||++++||++||+|.||||||||.++|+|..+ ....+|+|.++|.++- .+ -+.+.++|++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4689999999999999999999999999999999999765 2356789999998642 22 134579999999
Q ss_pred C--CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 001154 911 D--IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1136)
Q Consensus 911 ~--~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1136)
+ .+.|.+|+.+.+.-....+.... ..++..+.+.++|+.+++.+-....-. .+.+|||||||||.||.||+.+|+
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~--YPhelSGGMrQRV~IAmala~~P~ 173 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKS--YPHELSGGMRQRVMIAMALALNPK 173 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhh--CCcccCCcHHHHHHHHHHHhCCCC
Confidence 6 46788898887765443322110 234456678888898888764333222 246899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 989 IVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+||.||||++||...+++|+++|+++.+ .|.|+|+||||+.. +.+.||||+||. .|++|+.|+..
T Consensus 174 LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMY-aG~iVE~g~~~ 239 (316)
T COG0444 174 LLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMY-AGRIVEEGPVE 239 (316)
T ss_pred EEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEE-CcEEEEeCCHH
Confidence 9999999999999999999999999986 69999999999874 889999999998 58999999864
No 329
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=329.61 Aligned_cols=221 Identities=23% Similarity=0.283 Sum_probs=173.5
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC---ceeEEEEEEcC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1136)
.+.++|+++.+.. +...+|+||||+|++||++||+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 3566666655421 234699999999999999999999999999999999997542 24589999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 001154 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1136)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1136)
.++.. ...++.++||+|++.++. .|++||+.|+...... ...+...+.++++++.++|.+-.+..++. .+.
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~~--~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~~ 224 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNGI--NDRKILEKIVEKSLKSAALWDEVKDDLDK-AGN 224 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcCC--ChHHHHHHHHHHHHHHcCCcchhhhhhhC-Ccc
Confidence 98742 245678999999998875 7999999986432211 11222234467788888874322222332 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
.||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+.+.+ ++|||++||+++ .+.+.+|++++|+ +|+
T Consensus 225 ~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~-~G~ 301 (329)
T PRK14257 225 ALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFY-QGW 301 (329)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999865 799999999976 4666799999998 579
Q ss_pred EEEeCCC
Q 001154 1048 LIYAGPL 1054 (1136)
Q Consensus 1048 ~~~~g~~ 1054 (1136)
++..|+.
T Consensus 302 i~e~g~~ 308 (329)
T PRK14257 302 IEEAGET 308 (329)
T ss_pred EEEeCCH
Confidence 9999876
No 330
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.3e-33 Score=362.68 Aligned_cols=135 Identities=21% Similarity=0.323 Sum_probs=106.0
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELV---ANPS 988 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~---~~p~ 988 (1136)
.+...||.|+|.++..-.........+..+.+ ++++.++|..+ .+... ..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45578999999876531111111123334445 47888898765 45433 479999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe-----cCcEEEEeCCCC
Q 001154 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPLG 1055 (1136)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~-----~gG~~~~~g~~~ 1055 (1136)
+|||||||+|||+.+...+++.|+++++.|.|||+++|+++ ..+.+|++++|. .||+++..|+..
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~--~i~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH--VVKVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHHhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999976 338899999995 368999999763
No 331
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-35 Score=322.80 Aligned_cols=209 Identities=22% Similarity=0.271 Sum_probs=167.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc-e--eEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-I--IEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
++..+|+|+|+++++||++||+|+||||||||+++|+|..++. + .+|+|.++|.++.. ...++.++|++|++
T Consensus 18 ~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 97 (259)
T PRK14260 18 NTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRP 97 (259)
T ss_pred CCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEeccc
Confidence 3457999999999999999999999999999999999976532 2 48999999987532 23456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++ .|++||+.+....+.. ....+..+.++++++.+++.+...... ...+..||+|||||++|||||+.+|++|+
T Consensus 98 ~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~lll 173 (259)
T PRK14260 98 NPFP-MSIYENVAYGVRISAK--LPQADLDEIVESALKGAALWQEVKDKL-NKSALGLSGGQQQRLCIARALAIKPKVLL 173 (259)
T ss_pred ccCC-ccHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHcCCcchhhhHh-cCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8887 8999999876543311 122333456778888888742111111 11235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec----CcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR----GGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~----gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+. .|++++.|+.
T Consensus 174 LDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 174 MDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 9999999999999999999999864 699999999987 57788999999973 4899999875
No 332
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=324.65 Aligned_cols=200 Identities=26% Similarity=0.315 Sum_probs=168.8
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCC-CCCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDI-HSPGL 917 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 917 (1136)
..+|+||||++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++. .++..
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGA 97 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccC
Confidence 459999999999999999999999999999999999876 568999999987643 234677999999974 56778
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
||.||+.+..... .....+..+.++++++.+++.+..+.. +..||||||||++|||||+.+|+||||||||+
T Consensus 98 tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~lAraL~~~p~llllDEPt~ 169 (277)
T PRK13642 98 TVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSGGQKQRVAVAGIIALRPEIIILDESTS 169 (277)
T ss_pred CHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 9999998764322 122333345678999999998776654 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+++.|++++++ |+|||++||+++. + ..+|++++|++ |+++..|+.
T Consensus 170 ~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~~g~~ 224 (277)
T PRK13642 170 MLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIKEAAP 224 (277)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999765 9999999999763 4 46999999985 788888875
No 333
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=321.81 Aligned_cols=208 Identities=22% Similarity=0.249 Sum_probs=169.3
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh-----hcccceEEEeccC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQN 910 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~ 910 (1136)
+++..+|+|+||++++||++||+|+||||||||+++|+|...+. +.+|+|.++|.++.. ..+++.++|++|+
T Consensus 18 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 97 (261)
T PRK14263 18 YGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQ 97 (261)
T ss_pred eCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecC
Confidence 35678999999999999999999999999999999999986531 258999999987532 2345679999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
+.++ .+|+.||+.+....+.. .....+.++++++.+++.+..+.... .....||+|||||++|||||+.+|++|
T Consensus 98 ~~~~-~~tv~enl~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~ll 171 (261)
T PRK14263 98 PNPF-SMSIFDNVAFGLRLNRY----KGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVL 171 (261)
T ss_pred Cccc-cccHHHHHHHHHhhcCc----hHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 8877 59999999887543311 12234567888999888543221111 124579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe-------cCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-------RGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~-------~gG~~~~~g~~ 1054 (1136)
+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|+ ++|+++..|+.
T Consensus 172 llDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 172 LLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 9999999999999999999999985 4799999999986 4678899999996 46899999875
No 334
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.1e-34 Score=319.92 Aligned_cols=206 Identities=23% Similarity=0.365 Sum_probs=169.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. .+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5999999999999999999999999999999999998753 12389999999987542 1245799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc----ccccc
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~dt 297 (1136)
+ +||+||+.+.....+.... ......++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 9999999886433210000 00112367788999997 54554
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
. ++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+..++.+++|+
T Consensus 141 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 S-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 4 356999999999999999999999999999999999999999999998865 3 5666788999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 001154 378 VILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1136)
+++|++|++++.|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987763
No 335
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-35 Score=328.55 Aligned_cols=205 Identities=24% Similarity=0.321 Sum_probs=169.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-------CCceEEEEeccCC-
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDW- 219 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 219 (1136)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999876 999999998774321 1356999999962
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-cccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 298 (1136)
.+..+||.||+.|+....+... .+...+++++++.+||. ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFSE----------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 3446899999988643211100 00122477889999996 455655
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||+|
T Consensus 143 ~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 P-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999999864 2566777889999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 001154 379 ILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1136)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 336
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=320.89 Aligned_cols=200 Identities=27% Similarity=0.382 Sum_probs=167.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1136)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. ..+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999998776 9999999988753 234589999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 001154 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1136)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~L 307 (1136)
||+.+.....+... .....+++++++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQL 129 (255)
T ss_pred HHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 99987543221100 001124778899999987666554 469
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 001154 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS--EGQ 385 (1136)
Q Consensus 308 SGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~--~G~ 385 (1136)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++..+||+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 9999999999999999999999999999999999999999999885433 4566668899999999999999998 599
Q ss_pred EEEecCh
Q 001154 386 IVYQGPR 392 (1136)
Q Consensus 386 iv~~G~~ 392 (1136)
++..++.
T Consensus 209 i~~~~~~ 215 (255)
T PRK11248 209 VVERLPL 215 (255)
T ss_pred EEEEecC
Confidence 9998764
No 337
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-35 Score=320.95 Aligned_cols=208 Identities=24% Similarity=0.264 Sum_probs=165.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCC----hhcccceEEEeccCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR----QETFARISGYCEQNDI 912 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~----~~~~~~~~gyv~Q~~~ 912 (1136)
+++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++. ....++.+||++|++.
T Consensus 14 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~ 93 (249)
T PRK14253 14 GENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPN 93 (249)
T ss_pred CCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCC
Confidence 4467999999999999999999999999999999999976531 35899999998753 1234567999999998
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
+++ .|+.||+.+....... .......+.+.++++.+++.+....... ..+.+||||||||++|||||+.+|+||||
T Consensus 94 ~~~-~tv~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~llll 169 (249)
T PRK14253 94 PFP-MSIYENVAYGLRAQGI--KDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFGLSGGQQQRLCIARTIAMEPDVILM 169 (249)
T ss_pred cCc-ccHHHHHHhHHHhcCC--CchHHHHHHHHHHHHHcCCchhhhHHhh-cCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 887 8999999876432211 1122334556778888877532111111 12357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 170 DEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 228 (249)
T PRK14253 170 DEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GELVEHDDT 228 (249)
T ss_pred eCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999865 699999999986 57778999999985 799988874
No 338
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=319.20 Aligned_cols=206 Identities=23% Similarity=0.303 Sum_probs=166.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 5899999999999999999999999999999999998752 12489999999876421 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc----ccccc
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~dt 297 (1136)
+ +||+||+.|.....+.... ......++.+++.+||. +..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 8999999886432211000 00112366677788873 33454
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
. .+.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++++.++|+..++.+++|+
T Consensus 147 ~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 N-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--S-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCE
Confidence 4 456999999999999999999999999999999999999999999999853 3 5666688899999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 001154 378 VILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 378 vilL~~G~iv~~G~~~~~~ 396 (1136)
+++|++|+++..|+.+++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987764
No 339
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=322.68 Aligned_cols=204 Identities=25% Similarity=0.319 Sum_probs=168.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCC-CCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1136)
.+|+|+|++|++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 5899999999999999999999999999999999998876 999999998875432 2457999999975 68888
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
|+++|+.|.....+.. . ......++.+++.+||.+..++.+
T Consensus 100 ~v~~~~~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVP--Y--------------------------------DEMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhhCCc-----
Confidence 9999998864322110 0 001123677899999987776654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEH-NITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCchHHhc-CCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999886532 4555667777778775 9999999999
Q ss_pred eEEEecChhhHH
Q 001154 385 QIVYQGPRVSVL 396 (1136)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1136)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 340
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8e-35 Score=317.73 Aligned_cols=202 Identities=26% Similarity=0.326 Sum_probs=167.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 36999999999999999999999999999999999999876 9999999988754322 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhC-CcccccccccCc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-LDTCADTLVGDE 302 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lg-L~~~~dt~vg~~ 302 (1136)
+||+||+.++....+.. .....+.+++.++ +.+..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~~--- 129 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGRRG--- 129 (230)
T ss_pred CcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhCCh---
Confidence 99999998764321100 0012355566665 455445544
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
+.||||||||++||+||+.+|++++|||||+|||+.++.++.+.|+++++. .+++++.++|+.+++..++|+|++|+
T Consensus 130 --~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 130 --GDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998753 24566668888999999999999999
Q ss_pred CCeEEEecChhhH
Q 001154 383 EGQIVYQGPRVSV 395 (1136)
Q Consensus 383 ~G~iv~~G~~~~~ 395 (1136)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998765
No 341
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.9e-35 Score=314.27 Aligned_cols=190 Identities=24% Similarity=0.310 Sum_probs=162.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcH
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
+++.+|+++||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.....++.++|++|++.+++.+|+
T Consensus 22 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i~~~~~~~~i~~~~q~~~~~~~~t~ 99 (214)
T PRK13543 22 NEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTATRGDRSRFMAYLGHLPGLKADLST 99 (214)
T ss_pred CCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEccchhhhhceEEeecCcccccCCcH
Confidence 34579999999999999999999999999999999999876 4689999999876543345679999999988888999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+||+.+....+. . ...+.++++++.+++.+..+..+ ..||+|||||++|||+|+.+|++|+|||||+||
T Consensus 100 ~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~L 168 (214)
T PRK13543 100 LENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKKRLALARLWLSPAPLWLLDEPYANL 168 (214)
T ss_pred HHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999987653321 1 12234678889999877666543 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 001154 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~ 1043 (1136)
|+.++..+++.|+++.++|+|||++||+++ ++.+.+|+++++.
T Consensus 169 D~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 169 DLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999998878999999999987 5778899999885
No 342
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=4.9e-35 Score=312.29 Aligned_cols=186 Identities=27% Similarity=0.330 Sum_probs=159.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1136)
+++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (201)
T cd03231 11 DGRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTL 88 (201)
T ss_pred CCceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccccHHhhhheEEeccccccCCCc
Confidence 45679999999999999999999999999999999999876 468999999987532 33566799999999888899
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|++||+.+.... . ..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 89 tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~ 154 (201)
T cd03231 89 SVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPTT 154 (201)
T ss_pred CHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 999999874311 0 2345788999999987666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEE
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l 1042 (1136)
|||+.++..+++.|+++.++|+|||++||++. +....+++++++
T Consensus 155 ~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 155 ALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 99999999999999998777999999999976 577788888776
No 343
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.1e-34 Score=314.00 Aligned_cols=198 Identities=26% Similarity=0.374 Sum_probs=163.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-------CceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 220 (1136)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999998776 9999999988765322 2469999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++.+||.||+.+.....+... .....+++.+++.+||.+..+..++
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 145 (228)
T PRK10584 100 IPTLNALENVELPALLRGESS----------------------------------RQSRNGAKALLEQLGLGKRLDHLPA 145 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCChh
Confidence 899999999987543221000 0012347788999999877666554
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++... +++|+.++|+.+++ +.+|++++
T Consensus 146 -----~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~-~~~d~i~~ 218 (228)
T PRK10584 146 -----QLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREH-GTTLILVTHDLQLA-ARCDRRLR 218 (228)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEE
Confidence 699999999999999999999999999999999999999999999986543 44555577777777 45999999
Q ss_pred EcCCeEEEe
Q 001154 381 LSEGQIVYQ 389 (1136)
Q Consensus 381 L~~G~iv~~ 389 (1136)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999998753
No 344
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-35 Score=326.62 Aligned_cols=206 Identities=26% Similarity=0.352 Sum_probs=171.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-----CCCceEEEEeccCC-CCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDW-QVA 222 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~~ 222 (1136)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|. +|+|.++|+++... ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 5999999999999999999999999999999999998876 99999999887411 12357999999973 345
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
..||+||+.+.....+... .....+++++++.+||.+..++.+
T Consensus 97 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 139 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKPT--- 139 (283)
T ss_pred cccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCCc---
Confidence 6899999988543221100 001224788899999988776654
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..+||++++|+
T Consensus 140 --~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 140 --HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKEL-GLTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999987643 4566668899999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 001154 383 EGQIVYQGPRVSVLD 397 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1136)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999888753
No 345
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.2e-34 Score=321.72 Aligned_cols=203 Identities=26% Similarity=0.305 Sum_probs=164.9
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCcc-----CCh---hc----ccceEEEec
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQ---ET----FARISGYCE 908 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~-----~~~---~~----~~~~~gyv~ 908 (1136)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+ +.. .. .++.+||++
T Consensus 18 ~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 18 PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 4579999999999999999999999999999999999876 468999999986 432 11 244699999
Q ss_pred cCCC--CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 001154 909 QNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1136)
Q Consensus 909 Q~~~--~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~ 985 (1136)
|++. +.+.+|+.||+.+....... .........+.++++.+++.+ ..+.. +..||||||||++|||||+.
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~Gq~qrl~laral~~ 168 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGA--RHYGDIRATAGDWLERVEIDAARIDDL-----PTTFSGGMQQRLQIARNLVT 168 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhcc--CcHHHHHHHHHHHHHHcCCChhHHhCC-----CccCCHHHHHHHHHHHHHhc
Confidence 9974 56778999998764321110 112233456788899999863 44433 35799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 986 ~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|+||||||||+|||+.++..+++.|+++.++ |.|||++||+++ .+...+|++++|++ |++++.|+.
T Consensus 169 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 169 HPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRLLVMKQ-GRVVESGLT 236 (258)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999999998764 899999999976 45567999999985 799998875
No 346
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.6e-35 Score=312.69 Aligned_cols=189 Identities=24% Similarity=0.328 Sum_probs=157.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1136)
+++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+
T Consensus 12 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (204)
T PRK13538 12 DERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTEL 89 (204)
T ss_pred CCEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcccchHHhhhheEEeCCccccCcCC
Confidence 45679999999999999999999999999999999999876 468999999987542 23456789999999888999
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|++||+.+....+.. ...+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++|+|||||+
T Consensus 90 tv~e~l~~~~~~~~~------~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~ 158 (204)
T PRK13538 90 TALENLRFYQRLHGP------GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQRRVALARLWLTRAPLWILDEPFT 158 (204)
T ss_pred cHHHHHHHHHHhcCc------cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 999999876533211 12345788999999987666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEE
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFM 1042 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l 1042 (1136)
|||+.++..+++.|++++++|.|||++||+++ .+.+..+|++++
T Consensus 159 ~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 159 AIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 99999999999999998777899999999976 344433455544
No 347
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=319.62 Aligned_cols=208 Identities=27% Similarity=0.362 Sum_probs=166.5
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
++..+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.++.. ...++.++|++|++
T Consensus 14 ~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~ 93 (250)
T PRK14262 14 GEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKP 93 (250)
T ss_pred CCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCC
Confidence 3457999999999999999999999999999999999975421 258999999987532 23456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++ .|++||+.+....... ......++.++++++.+++.+..+... ...+.+||+|||||++|||||+.+|+||+
T Consensus 94 ~~~~-~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qr~~la~al~~~p~lll 169 (250)
T PRK14262 94 TPFP-MSIYDNVAFGPRIHGV--KSKHKLDRIVEESLKKAALWDEVKSEL-NKPGTRLSGGQQQRLCIARALAVEPEVIL 169 (250)
T ss_pred ccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCchhHHHH-hCChhhcCHHHHHHHHHHHHHhCCCCEEE
Confidence 8887 8999999876433211 112233455778888888754211111 11235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.+|++++|++ |+++..|+.
T Consensus 170 lDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (250)
T PRK14262 170 LDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GELIEYGPT 229 (250)
T ss_pred EeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 9999999999999999999999864 799999999976 46788999999985 789888864
No 348
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.1e-33 Score=353.59 Aligned_cols=208 Identities=28% Similarity=0.391 Sum_probs=174.7
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.++|++|.++. .++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 5788888887631 23569999999999999999999999999999999999877 5689999999986
Q ss_pred C---hhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------cccccCCC
Q 001154 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1136)
Q Consensus 896 ~---~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~~~~~ 965 (1136)
+ ...+++.+|||+|++.++++ |++||+.++. + .+ ++.++++++..++.+.. |+.++..
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~- 585 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMSG-SIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG- 585 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCcc-cHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC-
Confidence 5 35678899999999998865 9999998742 1 11 23467778888776533 3445443
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
..+||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++ ++|+|++||+++ ..+.+|++++|+ +
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~-~ 659 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLD-A 659 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEE-C
Confidence 3579999999999999999999999999999999999999999999886 689999999975 567899999998 4
Q ss_pred cEEEEeCCC
Q 001154 1046 GELIYAGPL 1054 (1136)
Q Consensus 1046 G~~~~~g~~ 1054 (1136)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 899999984
No 349
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=321.27 Aligned_cols=209 Identities=22% Similarity=0.252 Sum_probs=168.0
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh-----hcccceEEEeccCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1136)
+..+|+|+||++++||++||+|+||||||||+++|+|..++. ...|+|.++|.++.. ..+++.++|++|++.
T Consensus 19 ~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~ 98 (261)
T PRK14258 19 TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPN 98 (261)
T ss_pred CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCc
Confidence 446999999999999999999999999999999999986531 137999999987531 234567999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
+++ .|++||+.+....... ....+..+.+.++++.+++.+..+.... ..+..||||||||++|||+|+.+|+||+|
T Consensus 99 l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgGq~qrv~laral~~~p~vllL 174 (261)
T PRK14258 99 LFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIH-KSALDLSGGQQQRLCIARALAVKPKVLLM 174 (261)
T ss_pred cCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 887 8999999876432211 1222334567888999988542211111 12357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecC----cEEEEeCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRG----GELIYAGPL 1054 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~g----G~~~~~g~~ 1054 (1136)
||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++.+.+|++++|++| |++++.|+.
T Consensus 175 DEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 240 (261)
T PRK14258 175 DEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNENRIGQLVEFGLT 240 (261)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCCCcCceEEEeCCH
Confidence 999999999999999999999865 4899999999986 577889999999853 899999875
No 350
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=320.19 Aligned_cols=205 Identities=26% Similarity=0.316 Sum_probs=165.3
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCce---eEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGI---IEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||+|++||++||+||||||||||+++|+|..++.+ .+|+|.++|.++.. ..+++.+||++|++
T Consensus 15 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 94 (252)
T PRK14272 15 GDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKP 94 (252)
T ss_pred CCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccC
Confidence 45679999999999999999999999999999999999865322 37999999987632 23456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1136)
.+++.+|+.||+.+....... ...+...+.++++++.+++.. ..+. .+..||||||||++|||+|+.+|
T Consensus 95 ~~~~~~t~~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~~~~LS~G~~qrv~laral~~~p 167 (252)
T PRK14272 95 NPFPTMSVFDNVVAGLKLAGI--RDRDHLMEVAERSLRGAALWDEVKDRLKT-----PATGLSGGQQQRLCIARALAVEP 167 (252)
T ss_pred ccCcCCCHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCcchhhhhhhcC-----CcccCCHHHHHHHHHHHHHhcCC
Confidence 999999999999875432211 112223345566666666532 2222 23579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+||+|||||+|||+.++..+.+.|++++ +++|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 168 ~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 231 (252)
T PRK14272 168 EILLMDEPTSALDPASTARIEDLMTDLK-KVTTIIIVTHNMH-QAARVSDTTSFFLV-GDLVEHGPT 231 (252)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999999986 4799999999986 46678999999985 789988874
No 351
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=328.68 Aligned_cols=211 Identities=21% Similarity=0.284 Sum_probs=171.4
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCC-----CCCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1136)
..+|+|+|++|++|++++|+|||||||||||++|+|...+. .+.+|+|.++|.++... ..++.++||+|++++
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35999999999999999999999999999999999987531 13489999999987532 235679999999997
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
+. .||+|||.|+....+... .+ ..+..+..+++.++|.+..++.++
T Consensus 175 ~~-~ti~eNi~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGIND-RK--------------------------------ILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred CC-CcHHHHHHhHHHhcCCCh-HH--------------------------------HHHHHHHHHHHHcCCcchhhhhhh
Confidence 75 799999998643221100 00 001225667778887655555665
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
. ...+|||||||||+|||||+.+|+||+|||||+|||+.+...+.+.|+++.+ +.++++++|....+.+++|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEE
Confidence 4 4568999999999999999999999999999999999999999999998764 35677788999999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 001154 381 LSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1136)
|++|+++..|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998874
No 352
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=320.12 Aligned_cols=208 Identities=23% Similarity=0.280 Sum_probs=165.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||+|.+|+++||+||||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.++|++|++
T Consensus 15 ~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 94 (251)
T PRK14249 15 HKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQP 94 (251)
T ss_pred CCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCC
Confidence 3457999999999999999999999999999999999986531 236999999987532 23467799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++. |++||+.+....+... ..+...+.++++++.+++.+....... ..+..||+|||||++|||||+.+|++|+
T Consensus 95 ~~~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lll 170 (251)
T PRK14249 95 NPFPK-SIFDNVAFGPRMLGTT--AQSRLDEVVEKSLRQAALWDEVKDNLH-KSGLALSGGQQQRLCIARVLAIEPEVIL 170 (251)
T ss_pred ccCcC-cHHHHHhhHHHhcCCC--hhhHHHHHHHHHHHHhCCchhhhhHhh-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88875 9999998865433111 112223456777888776532111111 1245799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++. +++|||++||+++ .+.+.+|++++|. +|++++.|+.
T Consensus 171 LDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 230 (251)
T PRK14249 171 MDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLL-TGDLVEYGRT 230 (251)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEe-CCeEEEeCCH
Confidence 999999999999999999999984 5899999999976 4677889999997 5789888875
No 353
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-35 Score=320.58 Aligned_cols=194 Identities=23% Similarity=0.282 Sum_probs=165.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHHH
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRE 228 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 228 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5999999999999999999999999999999999998876 9999999976532 2467999999998888899999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 001154 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1136)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LS 308 (1136)
|+.+.... . ....++.+++.+||.+..+..+ ..||
T Consensus 101 nl~~~~~~-----~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LS 135 (257)
T PRK11247 101 NVGLGLKG-----Q-----------------------------------WRDAALQALAAVGLADRANEWP-----AALS 135 (257)
T ss_pred HHHhcccc-----h-----------------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCC
Confidence 99874210 0 0113667888999987666554 4699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001154 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1136)
Q Consensus 309 GGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 388 (1136)
|||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQH-GFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999886543 4556668898889999999999999999999
Q ss_pred ecChh
Q 001154 389 QGPRV 393 (1136)
Q Consensus 389 ~G~~~ 393 (1136)
.|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88753
No 354
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-35 Score=362.45 Aligned_cols=214 Identities=26% Similarity=0.393 Sum_probs=176.6
Q ss_pred cCCCcceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccC
Q 001154 142 RGNRSKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQD 218 (1136)
Q Consensus 142 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 218 (1136)
+..+++.+||+|+|+++++|+.+||+|||||||||...+|-..++|. +|.|.++|+++++... ++.+|.|+|+|
T Consensus 997 YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP 1073 (1228)
T KOG0055|consen 997 YPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEP 1073 (1228)
T ss_pred CCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCc
Confidence 34567789999999999999999999999999999999999999876 9999999999988764 57899999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccc
Q 001154 219 WQVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1136)
Q Consensus 219 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~ 298 (1136)
.+|. .|+||||.|+... ...+.+.++++. +++ .+. +.+|++.+||.
T Consensus 1074 ~LF~-~TIrENI~YG~~~----vs~~eIi~Aak~---ANa-----------------------H~F---I~sLP~GyDT~ 1119 (1228)
T KOG0055|consen 1074 VLFN-GTIRENIAYGSEE----VSEEEIIEAAKL---ANA-----------------------HNF---ISSLPQGYDTR 1119 (1228)
T ss_pred hhhc-ccHHHHHhccCCC----CCHHHHHHHHHH---hhh-----------------------HHH---HhcCcCcccCc
Confidence 9776 5999999997211 111222222211 110 111 45799999999
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
||+++. +||||||||++||||++.||+||||||.||+||+.+.+-+.+.|.+... ++|+|++.|. ..+..-+|.|
T Consensus 1120 vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~--gRT~IvIAHR--LSTIqnaD~I 1194 (1228)
T KOG0055|consen 1120 VGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAME--GRTTIVIAHR--LSTIQNADVI 1194 (1228)
T ss_pred cCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc--CCcEEEEecc--hhhhhcCCEE
Confidence 998665 6999999999999999999999999999999999999999999998753 5677764433 3467889999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 001154 379 ILLSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~~ 397 (1136)
+|+++|+|+++|++++++.
T Consensus 1195 ~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1195 AVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEECCEEEecccHHHHHh
Confidence 9999999999999999975
No 355
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=324.40 Aligned_cols=203 Identities=25% Similarity=0.358 Sum_probs=169.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC----CCceEEEEeccCC-CCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDW-QVAE 223 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~~ 223 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++. .+..
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 4999999999999999999999999999999999998775 999999999875432 1357999999975 4677
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||.||+.|.....+... .+....++++++.+||.+..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLPP----------------------------------IEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 899999988643221100 001224778899999988777655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999864 255666678888887 56999999999
Q ss_pred CeEEEecChhhHH
Q 001154 384 GQIVYQGPRVSVL 396 (1136)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1136)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 356
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.5e-34 Score=318.13 Aligned_cols=211 Identities=24% Similarity=0.356 Sum_probs=172.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999998876 9999999987754321 3469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.++..... ..+..+.. .. ......+++++++.+||++..++.++
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~-----------~~-------------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFF-----------RL-------------SAEEKDRIEEVLETIGLADEADRLAG--- 142 (242)
T ss_pred CCHHHHHHHhhhccc--cccccccc-----------cc-------------HHHHHHHHHHHHHHcCCchhhcCChh---
Confidence 999999988543110 00000000 00 00112347889999999877766554
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++.++||+|++|++
T Consensus 143 --~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 143 --LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 3 4666688999999999999999999
Q ss_pred CeEEEecChhhH
Q 001154 384 GQIVYQGPRVSV 395 (1136)
Q Consensus 384 G~iv~~G~~~~~ 395 (1136)
|++++.|+.+++
T Consensus 218 g~~~~~~~~~~~ 229 (242)
T TIGR03411 218 GSVLAEGSLDQV 229 (242)
T ss_pred CeEEeeCCHHHH
Confidence 999999987765
No 357
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.1e-34 Score=365.14 Aligned_cols=205 Identities=27% Similarity=0.363 Sum_probs=164.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1136)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|.+||+++.+... ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 46999999999999999999999999999999999999886 9999999999887653 578999999998776 5
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
|++|||.++.. ...+.+.++++. .+ .++.+ -.|++..||.+|+. .
T Consensus 542 TI~eNi~~~~~-----~~~e~i~~al~~---a~------------------------l~~~i--~~lp~G~dt~ige~-G 586 (686)
T TIGR03797 542 SIFENIAGGAP-----LTLDEAWEAARM---AG------------------------LAEDI--RAMPMGMHTVISEG-G 586 (686)
T ss_pred cHHHHHhcCCC-----CCHHHHHHHHHH---cC------------------------cHHHH--HhccccccccccCC-C
Confidence 99999988522 011111111110 00 11111 13567889999975 4
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
.+||||||||++||||++.+|++|+||||||+||+.+..+|.+.|+++ ++|+|+ ++|.. +..+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCEEEEEECC
Confidence 689999999999999999999999999999999999999999999864 345544 55655 455679999999999
Q ss_pred eEEEecChhhHHH
Q 001154 385 QIVYQGPRVSVLD 397 (1136)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1136)
+++..|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998863
No 358
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=320.71 Aligned_cols=219 Identities=25% Similarity=0.308 Sum_probs=173.1
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC---ceeEEEEEEcC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISG 892 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 892 (1136)
.+.++|+++.+ +++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFY-------------GDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEE-------------CCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 45666766554 345799999999999999999999999999999999998542 13689999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 001154 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1136)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1136)
.++.. ..+++.++|++|++.+++. |++||+.+....... ......++.++++++.+++.+....... ..+.
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 167 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGI--NNRRVLDEAVERSLRGAALWDEVKDRLH-ENAF 167 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCChhHHHHhh-CCcc
Confidence 87642 2346789999999888876 999999876433211 1122234557788888888531111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
.||+|||||++|||||+.+|+||||||||+|||+.++..+++.|+++++ +.|||++||+++ ++.+.+|++++|++ |+
T Consensus 168 ~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 244 (272)
T PRK14236 168 GLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-GK 244 (272)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 799999999976 46778999999984 79
Q ss_pred EEEeCCC
Q 001154 1048 LIYAGPL 1054 (1136)
Q Consensus 1048 ~~~~g~~ 1054 (1136)
++..|+.
T Consensus 245 i~~~g~~ 251 (272)
T PRK14236 245 LVEYGDT 251 (272)
T ss_pred EEecCCH
Confidence 9988874
No 359
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-35 Score=334.12 Aligned_cols=211 Identities=23% Similarity=0.391 Sum_probs=171.6
Q ss_pred cceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCc
Q 001154 814 PLSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGY 893 (1136)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 893 (1136)
+.++.|+|+++++. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|+|||.
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 34588898887763 34569999999999999999999999999999999998765 4799999998
Q ss_pred cCC---hhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------ccccccC
Q 001154 894 PKR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGL 963 (1136)
Q Consensus 894 ~~~---~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~ 963 (1136)
+++ .+.+|+.||||||+..++. -||.+|+.|+. .+.+. +.+-++.+..++.+. ..+.+|.
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~----eeV~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASD----EEVVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCH----HHHHHHHHHcCcHHHHHhccccchhhHhh
Confidence 864 4568899999999888874 59999999863 12222 223444455555432 2233554
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 001154 964 PGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1136)
Q Consensus 964 ~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~ 1043 (1136)
.| ..|||||||||+||||++.+|+|+++|||||.||.++.+.+++.+.+. ..|+|+|++.|+. +..+.||+|++|+
T Consensus 484 rG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~ 559 (591)
T KOG0057|consen 484 RG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLD 559 (591)
T ss_pred cc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEE
Confidence 43 459999999999999999999999999999999999999999999983 4699999999995 4788999999998
Q ss_pred cCcEEEEeCCC
Q 001154 1044 RGGELIYAGPL 1054 (1136)
Q Consensus 1044 ~gG~~~~~g~~ 1054 (1136)
+ |++...|+.
T Consensus 560 n-G~v~e~gth 569 (591)
T KOG0057|consen 560 N-GTVKEYGTH 569 (591)
T ss_pred C-CeeEEeccH
Confidence 5 788888875
No 360
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.3e-34 Score=320.63 Aligned_cols=201 Identities=22% Similarity=0.254 Sum_probs=164.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC--ceeEEEEEEcCccCChhcc-cceEEEeccCCC--CCCC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GIIEGDIYISGYPKRQETF-ARISGYCEQNDI--HSPG 916 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~ 916 (1136)
+.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|.++..... ++.++|++|++. +.+.
T Consensus 16 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~ 95 (254)
T PRK10418 16 QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPL 95 (254)
T ss_pred cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCcc
Confidence 3689999999999999999999999999999999998763 1168999999987643322 357999999974 4466
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc---ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL---SGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMD 993 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~---~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLD 993 (1136)
.|+.+++.+.+..... .. ..+.++++++.+++.+. .+.. +..||+|||||++|||||+.+|+|||||
T Consensus 96 ~~~~~~~~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~Gq~qrv~laral~~~p~lLlLD 165 (254)
T PRK10418 96 HTMHTHARETCLALGK---PA--DDATLTAALEAVGLENAARVLKLY-----PFEMSGGMLQRMMIALALLCEAPFIIAD 165 (254)
T ss_pred ccHHHHHHHHHHHcCC---Ch--HHHHHHHHHHHcCCCChhhhhhcC-----CcccCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7999988764322211 11 22567889999998752 3332 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 166 EPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 225 (254)
T PRK10418 166 EPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMS-HGRIVEQGDV 225 (254)
T ss_pred CCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999998764 899999999976 4667899999997 5799988875
No 361
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=320.50 Aligned_cols=208 Identities=23% Similarity=0.311 Sum_probs=167.8
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC---ceeEEEEEEcCccCCh----hcccceEEEeccCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ----ETFARISGYCEQNDI 912 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~ 912 (1136)
+++.+|+|+||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|.++.. ...++.++|++|++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~ 111 (276)
T PRK14271 32 AGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPN 111 (276)
T ss_pred CCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCc
Confidence 456799999999999999999999999999999999997652 1368999999987532 234667999999988
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
+++ .|++||+.+...... .....+....+.++++.+++....+.... ..+..||||||||++|||+|+.+|+||+|
T Consensus 112 l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~LSgGq~qrl~LAral~~~p~lllL 187 (276)
T PRK14271 112 PFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFRLSGGQQQLLCLARTLAVNPEVLLL 187 (276)
T ss_pred cCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 887 799999987543221 11223334456778888888643211111 12457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 188 DEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i~~~g~~ 246 (276)
T PRK14271 188 DEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRLVEEGPT 246 (276)
T ss_pred cCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999875 589999999976 46788999999985 799998875
No 362
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.2e-34 Score=316.11 Aligned_cols=207 Identities=21% Similarity=0.266 Sum_probs=167.9
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC-cceeeEEEECCccCCCCCC-CceEEEEeccCC--CCCCCC
Q 001154 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-PRTSAYVSQQDW--QVAEMT 225 (1136)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~-~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~lT 225 (1136)
+|+|+|+++++|++++|+||||||||||+++|+|.++|. .+.+|+|.++|+++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 579999999999999999999999999999999998761 0139999999988754332 257999999974 456789
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc---cccccccCc
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT---CADTLVGDE 302 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~---~~dt~vg~~ 302 (1136)
+.|++.+.....+... .....+++++++.+||++ ..+..
T Consensus 81 ~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 122 (230)
T TIGR02770 81 MGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPEEVLKKY---- 122 (230)
T ss_pred HHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchHHHHhCC----
Confidence 9999977533211000 001224778899999973 33443
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
+..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++++. .+++|+.++|..+++..++|++++|+
T Consensus 123 -~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 123 -PFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred -hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4569999999999999999999999999999999999999999999988653 24566678899999999999999999
Q ss_pred CCeEEEecChhhHH
Q 001154 383 EGQIVYQGPRVSVL 396 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1136)
+|+++..|+.+++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999987764
No 363
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-35 Score=318.62 Aligned_cols=203 Identities=26% Similarity=0.396 Sum_probs=167.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC----CCceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 223 (1136)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999998876 999999998875543 23569999999988998
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHh-CCcccccccccCc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL-GLDTCADTLVGDE 302 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~l-gL~~~~dt~vg~~ 302 (1136)
+||+||+.++.... .. + + ....++.+++.+ +|.+..++.+
T Consensus 95 ~tv~~~l~~~~~~~--~~--~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~--- 135 (237)
T PRK11614 95 MTVEENLAMGGFFA--ER--D---Q-----------------------------FQERIKWVYELFPRLHERRIQRA--- 135 (237)
T ss_pred CcHHHHHHHhhhcc--Ch--h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCch---
Confidence 99999998753211 00 0 0 011244556666 4655445433
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++.+++|++++|+
T Consensus 136 --~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 136 --GTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQ--GMTIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCcHHHHHhhCCEEEEEe
Confidence 469999999999999999999999999999999999999999999998653 4556667889999999999999999
Q ss_pred CCeEEEecChhhHH
Q 001154 383 EGQIVYQGPRVSVL 396 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1136)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999987763
No 364
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.5e-34 Score=333.91 Aligned_cols=199 Identities=27% Similarity=0.457 Sum_probs=170.1
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-------CCCceEEEEeccCCCCCCCC
Q 001154 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1136)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999998876 99999999887432 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.|+.+... . .+...+++++++.+||++..++.+ .
T Consensus 92 v~enl~~~~~~~~--~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------------------------------SERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------------------------------hHHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999988643110 0 001224778899999988777655 4
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999987643 4556668899999999999999999999
Q ss_pred EEEecChhhHH
Q 001154 386 IVYQGPRVSVL 396 (1136)
Q Consensus 386 iv~~G~~~~~~ 396 (1136)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988764
No 365
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.8e-34 Score=313.33 Aligned_cols=197 Identities=26% Similarity=0.367 Sum_probs=167.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVR 227 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 227 (1136)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999998776 999999998765322 35799999999888889999
Q ss_pred HHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCC
Q 001154 228 ETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGI 307 (1136)
Q Consensus 228 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~L 307 (1136)
||+.+.....+. ....+..+++.+||++..|..+ ..|
T Consensus 89 ~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGKKKA-----KQF 125 (223)
T ss_pred HHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHhhhH-----hhC
Confidence 999875432110 0113667888999987766654 469
Q ss_pred ChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001154 308 SGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIV 387 (1136)
Q Consensus 308 SGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv 387 (1136)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+. +.+|+.++|+..++.+++|++++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQ--GITVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 999999999999999999999999999999999999999999998642 455666788888999999999999999999
Q ss_pred EecChh
Q 001154 388 YQGPRV 393 (1136)
Q Consensus 388 ~~G~~~ 393 (1136)
+.|+..
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999764
No 366
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-35 Score=288.02 Aligned_cols=213 Identities=23% Similarity=0.327 Sum_probs=179.4
Q ss_pred cccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-------------
Q 001154 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------------- 897 (1136)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------------- 897 (1136)
++.+..+.++...+|++||++.+.|+++.|+|.|||||||+|+||.-+.+ +..|.|.++|..++.
T Consensus 8 ~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~ 85 (256)
T COG4598 8 EVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADK 85 (256)
T ss_pred ehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCH
Confidence 34455567788999999999999999999999999999999999987766 568999999965310
Q ss_pred ---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHH
Q 001154 898 ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQR 974 (1136)
Q Consensus 898 ---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqr 974 (1136)
...+...|+|+|+..++..+||.||+.-... +. ...++.+..++.+..+..+|+.+.++.+. ..|||||+
T Consensus 86 ~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPv-hV-Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQ 158 (256)
T COG4598 86 RQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPV-HV-LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQ 158 (256)
T ss_pred HHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcch-Hh-hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHH
Confidence 1234568999999999999999999974322 11 12445666777888999999988887653 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 975 KRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 975 qrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||++|||||+.+|+++++|||||+|||+-.-++.+.+++|+++|+|.+++||.+.+ .-+...++++|.+ |.+...||+
T Consensus 159 QR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P 236 (256)
T COG4598 159 QRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPP 236 (256)
T ss_pred HHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCCh
Confidence 99999999999999999999999999999999999999999999999999999764 4556789999985 799999987
No 367
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=324.30 Aligned_cols=207 Identities=23% Similarity=0.328 Sum_probs=164.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC--C-ceeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
++..+|+|+||+|++||++||+||||||||||+++|+|... + .+.+|+|.++|.++.. ..+++.+||++|++
T Consensus 50 ~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 129 (286)
T PRK14275 50 GEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKP 129 (286)
T ss_pred CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCC
Confidence 34569999999999999999999999999999999999642 1 1268999999987532 13456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+++. |+.||+.+....+... .....++.+.++++.+++.+ +.+.. ...+..||||||||++|||||+.+|++|
T Consensus 130 ~l~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~--~~~~~~LSgGq~qrv~LAraL~~~p~ll 204 (286)
T PRK14275 130 NPFPK-SIFDNIAYGPRLHGIN--DKKQLEEIVEKSLRKAALWDEVSDRL--DKNALGLSGGQQQRLCVARTLAVEPEIL 204 (286)
T ss_pred CCCcc-CHHHHHHhHHHhcCCC--cHHHHHHHHHHHHHHhCCccchhhHh--hCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 88875 9999999864332111 12223455778888888742 11111 1123579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++ |+++..|+.
T Consensus 205 lLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~~-G~i~~~g~~ 265 (286)
T PRK14275 205 LLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFYE-GVLVEHAPT 265 (286)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999864 689999999986 46678999999984 799988874
No 368
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=334.06 Aligned_cols=227 Identities=26% Similarity=0.374 Sum_probs=192.2
Q ss_pred cccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEE
Q 001154 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGY 906 (1136)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy 906 (1136)
++++.++.++..++|+||||++++||++||||.||||||||+|+|+|..+ +.+|+|.++|.+... .....-|+.
T Consensus 10 ~~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~~ 87 (500)
T COG1129 10 ELRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIAT 87 (500)
T ss_pred eeecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcEE
Confidence 34555667788899999999999999999999999999999999999877 579999999987642 234567899
Q ss_pred eccCCCCCCCCcHHHHHHHHhhhcC-CCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 001154 907 CEQNDIHSPGLTVLESLLFSAWLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1136)
Q Consensus 907 v~Q~~~~~~~ltv~e~l~~~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~ 985 (1136)
|.|+..+.|++||.||+.++...+. ..-++.....+...++|+.+++....+..+ ..||.||||.|.|||||..
T Consensus 88 V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v-----~~LsiaqrQ~VeIArAl~~ 162 (500)
T COG1129 88 VHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLV-----GDLSIAQRQMVEIARALSF 162 (500)
T ss_pred EeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhh-----hhCCHHHHHHHHHHHHHhc
Confidence 9999999999999999987754433 123456667778889999999863355554 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC-CCC-chhHHHH
Q 001154 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP-LGS-KSCELIK 1063 (1136)
Q Consensus 986 ~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~-~~~-~~~~~~~ 1063 (1136)
+++||+||||||.|+......+.+.+++++++|.+||+|||.++ ++++.|||+.||.+ |+++...+ .++ ...++++
T Consensus 163 ~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv~ 240 (500)
T COG1129 163 DARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELVR 240 (500)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHHH
Confidence 99999999999999999999999999999999999999999997 89999999999985 78888888 344 3445666
Q ss_pred HHH
Q 001154 1064 YFE 1066 (1136)
Q Consensus 1064 ~~~ 1066 (1136)
..-
T Consensus 241 ~Mv 243 (500)
T COG1129 241 LMV 243 (500)
T ss_pred Hhh
Confidence 554
No 369
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=319.88 Aligned_cols=206 Identities=29% Similarity=0.464 Sum_probs=171.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1136)
..+|+|+|++|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999998776 999999998765432 235689999998877889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||+||+.+.....+... ......++.+++.+||.+..++.++
T Consensus 92 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 133 (258)
T PRK13548 92 TVEEVVAMGRAPHGLSR----------------------------------AEDDALVAAALAQVDLAHLAGRDYP---- 133 (258)
T ss_pred CHHHHHHhhhcccCCCc----------------------------------HHHHHHHHHHHHHcCCHhHhcCCcc----
Confidence 99999988532111000 0011236788999999877676554
Q ss_pred CCCChhhhhHHHHHHHHh------CCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 305 KGISGGQKKRLTTGELLV------GPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~------~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
.|||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|
T Consensus 134 -~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 134 -QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred -cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEE
Confidence 69999999999999999 5999999999999999999999999999987333 456666889999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 001154 379 ILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1136)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999887654
No 370
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.3e-34 Score=314.38 Aligned_cols=196 Identities=22% Similarity=0.322 Sum_probs=164.4
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 221 (1136)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 36999999999999999999999999999999999998776 999999998775432 235799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||+||+.+.....+... .+....++.+++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP-- 135 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc--
Confidence 89999999988643321100 000123667888999987666554
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. +++++.++|+.+++..++|+|++|
T Consensus 136 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 136 ---IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV--GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 456777889999999999999999
Q ss_pred cCCeEE
Q 001154 382 SEGQIV 387 (1136)
Q Consensus 382 ~~G~iv 387 (1136)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 371
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.8e-34 Score=321.42 Aligned_cols=207 Identities=23% Similarity=0.311 Sum_probs=170.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC------CCceEEEEeccC--C
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV------PPRTSAYVSQQD--W 219 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 219 (1136)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|+++|.++.... .++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 56999999999999999999999999999999999998876 999999998875432 235699999996 4
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-cccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 298 (1136)
+++.+||+||+.+....... .. ......+++++++.+||. ...+..
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~------------------~~---------------~~~~~~~~~~~l~~~gl~~~~~~~~ 147 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTS------------------LD---------------ESEQKARIAELLDMVGLRSEDADKL 147 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcC------------------CC---------------HHHHHHHHHHHHHHcCCChhhhhCC
Confidence 56789999999765321100 00 000123467889999996 555554
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+...+.+++|++
T Consensus 148 ~-----~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~i 221 (265)
T TIGR02769 148 P-----RQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQRV 221 (265)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhcEE
Confidence 4 4699999999999999999999999999999999999999999999987532 456677889999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 001154 379 ILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1136)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 222 AVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEeCCEEEEECCHHHHc
Confidence 999999999999988764
No 372
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=322.76 Aligned_cols=203 Identities=22% Similarity=0.284 Sum_probs=163.9
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC--C-ceeEEEEEEcCccCCh-----hcccceEEEeccCCC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI 912 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~ 912 (1136)
+..+|+|+||+|++||++||+|+||||||||+++|+|... + .+.+|+|.++|.++.. ..+++.+||++|++.
T Consensus 33 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 112 (268)
T PRK14248 33 EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPN 112 (268)
T ss_pred CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCc
Confidence 4579999999999999999999999999999999999642 1 1368999999987632 134567999999998
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANPS 988 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ 988 (1136)
+++. |++||+.+...... .......++.++++++.+++.. ..+. .+..||||||||++|||||+.+|+
T Consensus 113 ~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LSgGq~qrl~laral~~~p~ 184 (268)
T PRK14248 113 PFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHS-----SALSLSGGQQQRLCIARTLAMKPA 184 (268)
T ss_pred cCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhc-----CcccCCHHHHHHHHHHHHHhCCCC
Confidence 8875 99999987643221 1112223445677888888742 2222 235799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 989 IVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 989 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 185 lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 247 (268)
T PRK14248 185 VLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL-NGDLVEYDQT 247 (268)
T ss_pred EEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999999864 689999999976 4678899999998 4799998874
No 373
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=320.68 Aligned_cols=205 Identities=22% Similarity=0.272 Sum_probs=169.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC----------------CCCceE
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF----------------VPPRTS 211 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 211 (1136)
+++|+|+|+.|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 46999999999999999999999999999999999998775 89999999876421 113579
Q ss_pred EEEeccCCCCCCCCHHHHHHHhhh-hcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhC
Q 001154 212 AYVSQQDWQVAEMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 290 (1136)
Q Consensus 212 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lg 290 (1136)
+|++|++.+++.+||+||+.++.. ..+.. . .....++.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~-------~---------------------------~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS-------K---------------------------QEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC-------H---------------------------HHHHHHHHHHHHHcC
Confidence 999999998999999999987431 11100 0 001224678899999
Q ss_pred Ccccc-cccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChh
Q 001154 291 LDTCA-DTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP 369 (1136)
Q Consensus 291 L~~~~-dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~ 369 (1136)
|.+.. +. ....||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.+|+.++|+..
T Consensus 141 l~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~--g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEE--GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHH
Confidence 97653 43 34579999999999999999999999999999999999999999999998652 556666889999
Q ss_pred HHHhhcCeEEEEcCCeEEEecChhhHH
Q 001154 370 EAYELFDDVILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 370 ~~~~~~D~vilL~~G~iv~~G~~~~~~ 396 (1136)
++..+||+|++|++|++++.|+.+++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999987763
No 374
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.5e-34 Score=351.29 Aligned_cols=211 Identities=22% Similarity=0.362 Sum_probs=173.5
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh----cccceEEEeccCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE----TFARISGYCEQNDIHS 914 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~ 914 (1136)
++++.+|+||||++++||++||+||||||||||+++|+|..++++.+|+|.++|.++... ..++.+||++|++.++
T Consensus 11 ~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (500)
T TIGR02633 11 FGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLV 90 (500)
T ss_pred eCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccC
Confidence 345679999999999999999999999999999999999876323589999999876431 1245699999999889
Q ss_pred CCCcHHHHHHHHhhhcCCC-cccHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 915 PGLTVLESLLFSAWLRLPS-EIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~-~~~~~~~~~~v~~~l~~l~l~~~~-~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
+.+||.||+.+....+... ........+.++++++.+++.+.. +.. +..|||||||||+|||||+.+|+||||
T Consensus 91 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~iA~al~~~p~lllL 165 (500)
T TIGR02633 91 PELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYGGGQQQLVEIAKALNKQARLLIL 165 (500)
T ss_pred CCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 9999999998864322110 112233445678899999987643 232 347999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
||||+|||+.++..+.+.|++++++|.|||++||+++ .+.+.||++++|++ |++++.|+...
T Consensus 166 DEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (500)
T TIGR02633 166 DEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVATKDMST 227 (500)
T ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEeeecCccc
Confidence 9999999999999999999999878999999999976 46678999999985 78988887654
No 375
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.1e-34 Score=352.20 Aligned_cols=201 Identities=22% Similarity=0.328 Sum_probs=171.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c-ccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+|+||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.++... . .++.+||++|++.+++
T Consensus 22 ~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 99 (510)
T PRK15439 22 SGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFP 99 (510)
T ss_pred CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEeccCccCC
Confidence 44579999999999999999999999999999999999876 4689999999875421 1 2346899999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.+||+||+.|.... ....++.++++++.+++.+..+..+ ..|||||||||+|||||+.+|+|||||||
T Consensus 100 ~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~aL~~~p~lllLDEP 167 (510)
T PRK15439 100 NLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSA-----GSLEVADRQIVEILRGLMRDSRILILDEP 167 (510)
T ss_pred CCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 99999999875311 1223456788999999987666544 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
|+|||+.++..+++.|++++++|.|||++||+++ .+...||++++|.+ |++++.|+...
T Consensus 168 t~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 226 (510)
T PRK15439 168 TASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALSGKTAD 226 (510)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecChHH
Confidence 9999999999999999999878999999999976 46778999999985 78999988654
No 376
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=322.20 Aligned_cols=207 Identities=26% Similarity=0.349 Sum_probs=169.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCC-CCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1136)
++|+|+|++|++|++++|+||||||||||+++|+|.+.|....+|+|+++|.++.... .++.++|++|++. .++.+
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 5999999999999999999999999999999999999875222499999999875432 2357999999974 57789
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||+|||.|..+..+... .+...+++.+++.+||.+..++.+
T Consensus 101 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVPR----------------------------------PEMIKIVRDVLADVGMLDYIDSEP----- 141 (282)
T ss_pred CHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 99999987543221100 001234778899999987766654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++ ..||++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKN-NLTVISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999999999987543 45566677887777 579999999999
Q ss_pred eEEEecChhhHH
Q 001154 385 QIVYQGPRVSVL 396 (1136)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1136)
++++.|+++++.
T Consensus 220 ~i~~~g~~~~~~ 231 (282)
T PRK13640 220 KLLAQGSPVEIF 231 (282)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 377
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=316.28 Aligned_cols=209 Identities=24% Similarity=0.309 Sum_probs=166.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC--CCcceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++ +..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 59999999999999999999999999999999999864 1112489999999887531 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+ .||+||+.|+....+.... + .....++.+++.+||.+...+.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK-A--------------------------------YLAERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 5999999886432211000 0 00123667788888854221222 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
...+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tvii~tH~~~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--R-YTIIIVTHNMQQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CeEEEEEecHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998843 3 56666889999999999999999
Q ss_pred cCCeEEEecChhhH
Q 001154 382 SEGQIVYQGPRVSV 395 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1136)
++|++++.|+.+++
T Consensus 222 ~~G~i~~~g~~~~~ 235 (253)
T PRK14242 222 YMGKLIEVGPTEQI 235 (253)
T ss_pred ECCEEEEeCCHHHH
Confidence 99999999988765
No 378
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.4e-34 Score=315.23 Aligned_cols=201 Identities=26% Similarity=0.317 Sum_probs=166.0
Q ss_pred eeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCCHHHHH
Q 001154 151 LDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMTVRETL 230 (1136)
Q Consensus 151 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 230 (1136)
|+|+|++|++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999998776 9999999988754322 248999999889999999999
Q ss_pred HHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChh
Q 001154 231 DFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGG 310 (1136)
Q Consensus 231 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGG 310 (1136)
.+......... + . .....+++++++.+||++..++.++ .||||
T Consensus 76 ~~~~~~~~~~~--~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDL--S------K------------------------SERRAIVEEHIALVGLTEAADKRPG-----QLSGG 118 (230)
T ss_pred HHHHHhcccCC--C------H------------------------HHHHHHHHHHHHHcCCHHHHcCChh-----hCCHH
Confidence 87532100000 0 0 0012236788999999877776554 69999
Q ss_pred hhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEec
Q 001154 311 QKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 390 (1136)
Q Consensus 311 qkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G 390 (1136)
|||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +.+|+.++|+..++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999887543 456666888999999999999999999999988
Q ss_pred Chhh
Q 001154 391 PRVS 394 (1136)
Q Consensus 391 ~~~~ 394 (1136)
+..+
T Consensus 198 ~~~~ 201 (230)
T TIGR01184 198 QILE 201 (230)
T ss_pred Ccee
Confidence 6543
No 379
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.6e-34 Score=319.65 Aligned_cols=206 Identities=23% Similarity=0.320 Sum_probs=171.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC----------------CCceE
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----------------PPRTS 211 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~----------------~~~~~ 211 (1136)
.++|+|+|++|++|++++|+|||||||||||++|+|.+.|. +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 36999999999999999999999999999999999998776 999999998764321 24579
Q ss_pred EEEeccCCCCCCCCHHHHHHHhhhh-cCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhC
Q 001154 212 AYVSQQDWQVAEMTVRETLDFAGQC-QGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG 290 (1136)
Q Consensus 212 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lg 290 (1136)
+|++|++.+++.+||.||+.++... .+.. . ......++++++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~--------------------~--------------~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA--------------------R--------------AEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC--------------------H--------------HHHHHHHHHHHHHcC
Confidence 9999999889999999999875321 1000 0 001123677899999
Q ss_pred CcccccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhH
Q 001154 291 LDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPE 370 (1136)
Q Consensus 291 L~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~ 370 (1136)
|++..+..+ ..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++++.++|+.++
T Consensus 136 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHMP-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHH
Confidence 987766544 469999999999999999999999999999999999999999999988753 25667778899999
Q ss_pred HHhhcCeEEEEcCCeEEEecChhhHH
Q 001154 371 AYELFDDVILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 371 ~~~~~D~vilL~~G~iv~~G~~~~~~ 396 (1136)
+..++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999887663
No 380
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=323.23 Aligned_cols=202 Identities=23% Similarity=0.298 Sum_probs=164.0
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC---ceeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
++..+|+|+||+|++||++||+||||||||||+++|+|...+ .+.+|+|.++|.++.. ..+++.++|++|++
T Consensus 50 ~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~~~~~~~i~~v~q~~ 129 (285)
T PRK14254 50 GDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDPVALRRRIGMVFQKP 129 (285)
T ss_pred CCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccchHhhhccEEEEecCC
Confidence 345799999999999999999999999999999999998642 1358999999987532 23467899999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1136)
.+++. |+.||+.+....+. ... ...+.++++++.+++.. ..+. .+..||||||||++|||||+.+|
T Consensus 130 ~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~-----~~~~LSgGe~qrv~LAraL~~~p 199 (285)
T PRK14254 130 NPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDS-----SGLDLSGGQQQRLCIARAIAPDP 199 (285)
T ss_pred ccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhC-----CcccCCHHHHHHHHHHHHHHcCC
Confidence 88875 99999987654331 111 23456788899988853 2232 23589999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEE-EecCcEEEEeCCC
Q 001154 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLF-MKRGGELIYAGPL 1054 (1136)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~-l~~gG~~~~~g~~ 1054 (1136)
+||||||||+|||+.++..+.+.|+++++ ++|||++||+++ .+...+|++++ |+ +|+++..|+.
T Consensus 200 ~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l~-~G~i~~~g~~ 264 (285)
T PRK14254 200 EVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFLT-GGELVEFDDT 264 (285)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEee-CCEEEEeCCH
Confidence 99999999999999999999999999975 489999999976 46677999764 56 5899988874
No 381
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-34 Score=312.09 Aligned_cols=194 Identities=31% Similarity=0.447 Sum_probs=160.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCC-CCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999998776 999999998775432 2357899999974 4677
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.+.....+... ......++++++.+||++..++.+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999987543211000 001123677889999987666654
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++..+||+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 469999999999999999999999999999999999999999999998753 45677788999999999999999999
Q ss_pred Ce
Q 001154 384 GQ 385 (1136)
Q Consensus 384 G~ 385 (1136)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 382
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=302.11 Aligned_cols=158 Identities=29% Similarity=0.450 Sum_probs=142.4
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCCc
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
...+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (173)
T cd03230 12 KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLT 89 (173)
T ss_pred CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCc
Confidence 3469999999999999999999999999999999999876 468999999987543 234567999999998888899
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
+.||+. ||+|||||++|||||+.+|++|+|||||+|
T Consensus 90 v~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~ 125 (173)
T cd03230 90 VRENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSG 125 (173)
T ss_pred HHHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccC
Confidence 999873 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
||+.++..+.+.|++++++|.|||++||+++ .+.+.+|++++|++|
T Consensus 126 LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 126 LDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999877999999999976 466789999999864
No 383
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=318.43 Aligned_cols=204 Identities=25% Similarity=0.336 Sum_probs=164.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC--c-eeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+.+.+|+|+|++|++||++||+|+||||||||+++|+|..++ . +.+|+|.++|.++.. ...++.++|++|++
T Consensus 15 ~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~ 94 (251)
T PRK14251 15 GNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQP 94 (251)
T ss_pred CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCC
Confidence 345799999999999999999999999999999999997641 1 358999999987532 23456799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVANP 987 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p 987 (1136)
.+++ .|++||+.+....+.. ......++.++++++.+++.. ..+. .+.+||||||||++|||||+.+|
T Consensus 95 ~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~~LS~Gq~qr~~laral~~~p 166 (251)
T PRK14251 95 TPFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDR-----NAQAFSGGQQQRICIARALAVRP 166 (251)
T ss_pred ccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhcc-----ChhhCCHHHHHHHHHHHHHhcCC
Confidence 8776 7999999875432211 112223345778888888842 2222 23579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 988 SIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 988 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 167 ~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 230 (251)
T PRK14251 167 KVVLLDEPTSALDPISSSEIEETLMELK-HQYTFIMVTHNLQ-QAGRISDQTAFLM-NGDLIEAGPT 230 (251)
T ss_pred CEEEecCCCccCCHHHHHHHHHHHHHHH-cCCeEEEEECCHH-HHHhhcCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999999985 4799999999976 4677899999998 4789888864
No 384
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=322.64 Aligned_cols=205 Identities=21% Similarity=0.300 Sum_probs=167.4
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-------CCceEEEEeccCC-
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-------PPRTSAYVSQQDW- 219 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 219 (1136)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999998876 999999998875421 2356999999962
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc-ccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTL 298 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~-~~dt~ 298 (1136)
.+...||+||+.|.....+... .+....++.+++.+||.. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3334799999987543221100 001123677888999963 44544
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|++
T Consensus 143 ~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 P-----FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQS--GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeccHHHHHHhCCEE
Confidence 4 469999999999999999999999999999999999999999999998652 456666888888999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 001154 379 ILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1136)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988763
No 385
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=350.21 Aligned_cols=210 Identities=24% Similarity=0.320 Sum_probs=174.5
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCCCCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~ 914 (1136)
++++.+|+||||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.++
T Consensus 8 ~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 85 (491)
T PRK10982 8 FPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLV 85 (491)
T ss_pred eCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccc
Confidence 345679999999999999999999999999999999999876 468999999987642 12356799999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+.+||+||+.+.............+..+.++++++.+++....+..+ .+|||||||||+|||||+.+|+||||||
T Consensus 86 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDE 160 (491)
T PRK10982 86 LQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDE 160 (491)
T ss_pred cCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 99999999987532110100122333456888999999977666543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCc
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSK 1057 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~ 1057 (1136)
||+|||+.++..+++.|++++++|.|||++||+++ ++...||++++|++ |+++..|+....
T Consensus 161 Pt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~~ 221 (491)
T PRK10982 161 PTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAGL 221 (491)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhhC
Confidence 99999999999999999999878999999999976 46778999999984 799999886543
No 386
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=318.59 Aligned_cols=208 Identities=25% Similarity=0.286 Sum_probs=165.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||++++||++||+||||||||||+++|+|..... +.+|+|.++|.++.. ...++.++|++|++
T Consensus 17 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 96 (253)
T PRK14261 17 GEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRP 96 (253)
T ss_pred CCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCC
Confidence 3457999999999999999999999999999999999974321 247999999987642 23456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++. ||+||+.|....+.. ......++.+.++++.+++.+....... ..+..||+|||||++|||+|+.+|++++
T Consensus 97 ~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~lll 172 (253)
T PRK14261 97 NPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLH-DSALSLSGGQQQRLCIARTLAVNPEVIL 172 (253)
T ss_pred ccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhh-cChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88875 999999987543321 1122334567788888877431111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++.+ ++|||++||++. .+.+.+|++++|++ |+++..|+.
T Consensus 173 LDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 232 (253)
T PRK14261 173 MDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GKLIEFDKT 232 (253)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CEEEEcCCH
Confidence 9999999999999999999999865 689999999976 46678999999985 789988875
No 387
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=326.89 Aligned_cols=217 Identities=16% Similarity=0.199 Sum_probs=171.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC-cceeeEEEECCccCCCCCC-------CceEEEEeccCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH-LQVSGKITYNGHGFKEFVP-------PRTSAYVSQQDW 219 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 219 (1136)
..+|+|||++|++||+++|+|+||||||||+++|+|++++. ...+|+|.|+|.++..... .+.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 56999999999999999999999999999999999998642 1348999999998765332 246999999975
Q ss_pred --CCCCCCHHHHHHHhhhhcCC-CCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccc
Q 001154 220 --QVAEMTVRETLDFAGQCQGV-GSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCAD 296 (1136)
Q Consensus 220 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~d 296 (1136)
+.+.+||.+++.+....... +..+ ... .+...++.++|+.+||.+..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~~-------------~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QRF-------------GWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------ccH-------------HHHHHHHHHHHHHCCCCChHH
Confidence 57889999999763221100 0000 000 001234778999999975321
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 001154 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1136)
Q Consensus 297 t~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1136)
. -+.....|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+.. +.+++.++|+...+.+++|
T Consensus 151 ~--~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 A--MRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN-NTTILLISHDLQMLSQWAD 227 (330)
T ss_pred H--HhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCC
Confidence 1 123445799999999999999999999999999999999999999999999987643 4567778999999999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 001154 377 DVILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~ 396 (1136)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999988764
No 388
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.1e-34 Score=320.94 Aligned_cols=205 Identities=25% Similarity=0.342 Sum_probs=169.3
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh------hcccceEEEeccCC--C
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ------ETFARISGYCEQND--I 912 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~ 912 (1136)
++.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.. ...++.+||++|++ .
T Consensus 24 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 24 HQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred ceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 3679999999999999999999999999999999999876 468999999987532 12456799999997 3
Q ss_pred CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 913 HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 913 ~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
+.+..|+.|++.+..... ...........++++++.+++. ...+.. +..||+|||||++|||||+.+|+|||
T Consensus 102 ~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~Ge~qrl~laral~~~p~lll 174 (268)
T PRK10419 102 VNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PPQLSGGQLQRVCLARALAVEPKLLI 174 (268)
T ss_pred cCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----CccCChHHHHHHHHHHHHhcCCCEEE
Confidence 567789999987643211 1122334445688999999986 455543 34799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
|||||+|||+.++..+.+.|++++++ |.|||++||+++ .+.+.+|++++|. +|++++.|+..+
T Consensus 175 LDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~~ 238 (268)
T PRK10419 175 LDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMD-NGQIVETQPVGD 238 (268)
T ss_pred EeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEE-CCEEeeeCChhh
Confidence 99999999999999999999998764 899999999976 4667899999997 579999988644
No 389
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-34 Score=310.82 Aligned_cols=195 Identities=24% Similarity=0.330 Sum_probs=163.8
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-CCceEEEEeccCCCCCCCCHHHHHH
Q 001154 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRETLD 231 (1136)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1136)
|+|+.+++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999998776 999999998875432 2357999999999899999999998
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhh
Q 001154 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1136)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1136)
++........ ...+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGLKLT----------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred cccccccCcc----------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7532110000 001224778899999987777655 4699999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEec
Q 001154 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQG 390 (1136)
Q Consensus 312 kkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G 390 (1136)
|||++||+||+.+|++++|||||+|||..++..+.+.|+++++.. +.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999986533 456666889999999999999999999998754
No 390
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=323.55 Aligned_cols=205 Identities=23% Similarity=0.327 Sum_probs=170.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC----CCceEEEEeccCC-CCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV----PPRTSAYVSQQDW-QVA 222 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 222 (1136)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++++ +|+|+++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999876 999999999875421 2467999999974 344
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
..||.|++.|+....+... .....+++++++.+||+...++.++
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~-- 143 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAPH-- 143 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCcc--
Confidence 5799999988643221100 0012247889999999887777654
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.. +|++++|+
T Consensus 144 ---~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 144 ---LLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKY-GITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ---cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecChHHHhc-CCEEEEEE
Confidence 699999999999999999999999999999999999999999999987543 4556667788888865 99999999
Q ss_pred CCeEEEecChhhHH
Q 001154 383 EGQIVYQGPRVSVL 396 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1136)
+|++++.|+.+++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988875
No 391
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.1e-34 Score=306.93 Aligned_cols=179 Identities=25% Similarity=0.316 Sum_probs=149.8
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-----hcccceEEEeccCCC-CC
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDI-HS 914 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~ 914 (1136)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 4569999999999999999999999999999999999876 468999999987531 134567999999973 23
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
...|++||+.+..... .....+..+.++++++.+++.+..+..+ ..||+|||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998864322 1222334456788999999987666543 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCc
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPS 1029 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~ 1029 (1136)
||+|||+.++..+.+.|++++++|+|||++||+++
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999975
No 392
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=318.28 Aligned_cols=221 Identities=20% Similarity=0.256 Sum_probs=173.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 223 (1136)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999998876 9999999988754321 2358999999999999
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
+||+||+.++....... +...... +. +. .+ ....+....++.+++.+||.+..++.+
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~------~~-~~--~~-------~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 151 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLL------KT-PA--FR-------RAESEALDRAATWLERVGLLEHANRQA---- 151 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhc------cc-cc--cc-------cchhHHHHHHHHHHHhCChhhhhhCCh----
Confidence 99999999854211000 0000000 00 00 00 000011234677899999987666655
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|++++|++
T Consensus 152 -~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 152 -GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEH-NVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999986532 45666788999999999999999999
Q ss_pred CeEEEecChhhHH
Q 001154 384 GQIVYQGPRVSVL 396 (1136)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1136)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999987653
No 393
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.4e-34 Score=315.56 Aligned_cols=213 Identities=22% Similarity=0.278 Sum_probs=169.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhh--CCCcceeeEEEECCccCCCCCC----CceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNGHGFKEFVP----PRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 221 (1136)
..+|+|+|+.|++|++++|+|||||||||||++|+|.+ +|. +|+|.++|.++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999985 344 9999999987754322 23489999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc-ccccccc
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT-CADTLVG 300 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~-~~dt~vg 300 (1136)
+.+|++|++.+.......... .... ...+...+++.+++.+||+. ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARG------------------EEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccc------------------cccc---------cHHHHHHHHHHHHHHcCCchhhcccccc
Confidence 999999999875432110000 0000 00011234788999999973 5555443
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhh-cCeEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYEL-FDDVI 379 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~-~D~vi 379 (1136)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+++|+.++|+.+++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcCCeEE
Confidence 24999999999999999999999999999999999999999999999864 245666688888899888 89999
Q ss_pred EEcCCeEEEecChhhHH
Q 001154 380 LLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~ 396 (1136)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999987543
No 394
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=316.85 Aligned_cols=209 Identities=24% Similarity=0.306 Sum_probs=170.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCCC---CCceEEEEeccCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVA 222 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 222 (1136)
..+|+|+|++|++|++++|+||||||||||+++|+|.+++. .+.+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35999999999999999999999999999999999998642 135999999998875432 2457999999998889
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc----ccccc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT----CADTL 298 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~dt~ 298 (1136)
.+||+||+.++.+..+.... . .+....+.++++.+||.+ ..++
T Consensus 96 ~~tv~enl~~~~~~~~~~~~------------------~--------------~~~~~~~~~~l~~~~l~~~~~~~~~~- 142 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS------------------K--------------KELQERVRWALEKAQLWDEVKDRLDA- 142 (250)
T ss_pred CCcHHHHHHHHHHhccccCC------------------H--------------HHHHHHHHHHHHHcCCCcchhhhhcC-
Confidence 99999999886432210000 0 001223677888999864 2343
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+..++.+++|++
T Consensus 143 ----~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i 215 (250)
T PRK14247 143 ----PAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQQAARISDYV 215 (250)
T ss_pred ----CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEE
Confidence 3457999999999999999999999999999999999999999999998853 356677888888999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 001154 379 ILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1136)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999987763
No 395
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=322.39 Aligned_cols=205 Identities=24% Similarity=0.361 Sum_probs=171.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCC-CCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAEM 224 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 224 (1136)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... ..+.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4999999999999999999999999999999999998876 999999998775422 2356899999963 34568
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||.||+.+.....+... .....+++++++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 99999987543221100 001224778899999988777665
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+.||+|++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETY-GMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999987642 466677889999999999999999999
Q ss_pred eEEEecChhhHH
Q 001154 385 QIVYQGPRVSVL 396 (1136)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1136)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999988774
No 396
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.1e-34 Score=315.27 Aligned_cols=198 Identities=22% Similarity=0.336 Sum_probs=160.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPG 916 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 916 (1136)
+++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 18 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~- 94 (225)
T PRK10247 18 GDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDISTLKPEIYRQQVSYCAQTPTLFG- 94 (225)
T ss_pred CCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEcCcCCHHHHHhccEEEeccccccc-
Confidence 34579999999999999999999999999999999999866 468999999986532 234567999999988876
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.|++||+.+....+.. . ...+.++++++.+++. ...+.. +..||+|||||++|||||+.+|++|+||||
T Consensus 95 ~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 164 (225)
T PRK10247 95 DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKN-----IAELSGGEKQRISLIRNLQFMPKVLLLDEI 164 (225)
T ss_pred ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 4999999875433211 1 1124567899999985 344443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 996 TSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
|+|||+.++..+.+.|+++.+ .|.|||++||+++. + +.+|++++|.+.+..+..|
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~~~ 220 (225)
T PRK10247 165 TSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQEA 220 (225)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHhhh
Confidence 999999999999999999875 48999999999763 4 5699999996444334333
No 397
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=350.39 Aligned_cols=205 Identities=27% Similarity=0.342 Sum_probs=170.8
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++
T Consensus 15 ~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~ 92 (501)
T PRK11288 15 PGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEMRFASTTAALAAGVAIIYQELHLVP 92 (501)
T ss_pred CCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHhCCEEEEEechhccC
Confidence 45679999999999999999999999999999999999876 468999999987532 224567999999998999
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEP 995 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEP 995 (1136)
.+||.||+.+....+........+.++.++++++.+++.+..+..+ ..||||||||++|||+|+.+|+|||||||
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDEP 167 (501)
T PRK11288 93 EMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSIGQRQMVEIAKALARNARVIAFDEP 167 (501)
T ss_pred CCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 9999999988532111111122334456888999999976655443 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC
Q 001154 996 TSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP 1053 (1136)
Q Consensus 996 TsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~ 1053 (1136)
|+|||+.++..+++.|++++++|+|||++||+++ .+...||++++|++ |+++..++
T Consensus 168 t~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~ 223 (501)
T PRK11288 168 TSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATFD 223 (501)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecC
Confidence 9999999999999999999878999999999986 46678999999985 78877664
No 398
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=318.77 Aligned_cols=204 Identities=21% Similarity=0.300 Sum_probs=166.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 5999999999999999999999999999999999988641 12499999999876432 1245699999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc----ccccc
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCADT 297 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~dt 297 (1136)
+ +||+||+.|..+..+... + .....++++++.+|+. +..++
T Consensus 106 ~-~tv~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 150 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGANK--K--------------------------------DLDGVVENALRSAALWDETSDRLKS 150 (258)
T ss_pred c-ccHHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCCcchhhhhcC
Confidence 7 899999988643221100 0 0012367788888884 33344
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
. .+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|+
T Consensus 151 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~-~tiiivsH~~~~~~~~~d~ 222 (258)
T PRK14268 151 P-----ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--D-YTIVIVTHNMQQAARISDY 222 (258)
T ss_pred C-----hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHHhCCE
Confidence 3 456999999999999999999999999999999999999999999998853 3 5666788999999999999
Q ss_pred EEEEcCCeEEEecChhhH
Q 001154 378 VILLSEGQIVYQGPRVSV 395 (1136)
Q Consensus 378 vilL~~G~iv~~G~~~~~ 395 (1136)
|++|++|++++.|+.+++
T Consensus 223 i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 223 TGFFLMGELIEFGQTRQI 240 (258)
T ss_pred EEEEECCEEEEeCCHHHH
Confidence 999999999999998776
No 399
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=320.58 Aligned_cols=204 Identities=27% Similarity=0.373 Sum_probs=169.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-----CCceEEEEeccCC-CCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QVA 222 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 222 (1136)
.+|+|+|++|++||+++|+||||||||||+++|+|.+++. +|+|+++|.++.... .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5999999999999999999999999999999999998876 999999998874211 2357999999963 344
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
.+||.||+.|.....+.. + .+...++..+++.+||.+..++.++
T Consensus 93 ~~tv~e~i~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~-- 136 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLS-K---------------------------------EEVEKRVKEALKAVGMEGFENKPPH-- 136 (275)
T ss_pred cccHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCchhhcCChh--
Confidence 579999998753211100 0 0011246788999999887777654
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
.||||||||++||+||+.+|++++|||||+|||+.++.++.+.|+++++. +++|+.++|+..++.++||++++|+
T Consensus 137 ---~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~--~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 137 ---HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE--GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC--CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 59999999999999999999999999999999999999999999998753 5667778899999999999999999
Q ss_pred CCeEEEecChhhHH
Q 001154 383 EGQIVYQGPRVSVL 396 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1136)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988874
No 400
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=317.08 Aligned_cols=208 Identities=22% Similarity=0.291 Sum_probs=163.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC--C-ceeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||+|.+||++||+|+||||||||+++|+|... + .+.+|+|.++|.++.. ...++.+||++|++
T Consensus 16 ~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 95 (252)
T PRK14255 16 GKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQP 95 (252)
T ss_pred CCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCC
Confidence 34679999999999999999999999999999999999743 1 1248999999987632 23456799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++ .|++||+.+....+... .....++.+.+.++.+++........ ...+..||+|||||++|||+|+.+|++|+
T Consensus 96 ~~~~-~tv~~nl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~i~~~~-~~~~~~LS~Gq~qrv~laral~~~p~lll 171 (252)
T PRK14255 96 NPFP-FSIYENVIYGLRLAGVK--DKAVLDEAVETSLKQAAIWDEVKDHL-HESALSLSGGQQQRVCIARVLAVKPDVIL 171 (252)
T ss_pred ccCC-CcHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHHcCCccchhhHH-hcCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8887 69999998764333211 11222344567777777642111111 11235899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 172 lDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 231 (252)
T PRK14255 172 LDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL-TGNLIEFADT 231 (252)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999865 589999999986 4677899999998 5789888864
No 401
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-34 Score=312.58 Aligned_cols=200 Identities=28% Similarity=0.407 Sum_probs=161.4
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCC--CCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQV--AEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 225 (1136)
.++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++. ..++.++|++|++.+. ..+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999998876 999999998654 2345799999997653 3489
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.+....... .+.. .. .....+++.+++.+||++..++.++
T Consensus 87 v~e~l~~~~~~~~~--~~~~--------------~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 131 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR--------------LS--------------KADKAKVDEALERVGLSELADRQIG----- 131 (213)
T ss_pred HHHHHHhccccccc--cccC--------------CC--------------HHHHHHHHHHHHHcCCHHHHhCCcc-----
Confidence 99999885321100 0000 00 0012247788999999876666554
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++++.++|+.+++.+++|++++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999999875 2 456777889999999999999999886
Q ss_pred EEEec
Q 001154 386 IVYQG 390 (1136)
Q Consensus 386 iv~~G 390 (1136)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 402
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.9e-34 Score=316.75 Aligned_cols=210 Identities=24% Similarity=0.335 Sum_probs=165.7
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccc-eEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFAR-ISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~-~~gyv~Q~~~~~~ 915 (1136)
+++.+|+||||++++||++||+|+||||||||+++|+|.....+.+|+|.++|.++.. ...++ .++|++|++.+++
T Consensus 18 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~q~~~~~~ 97 (252)
T CHL00131 18 NENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHLGIFLAFQYPIEIP 97 (252)
T ss_pred CCEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhheeeEEEEeccccccc
Confidence 3457999999999999999999999999999999999972112468999999987643 12222 4789999999999
Q ss_pred CCcHHHHHHHHhhhcCC----CcccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 916 GLTVLESLLFSAWLRLP----SEIELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~----~~~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+|+.+++.+....... .+....+..+.+.++++.+++. ...+.... ..||||||||++|||||+.+|+||
T Consensus 98 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LSgG~~qrv~la~al~~~p~ll 173 (252)
T CHL00131 98 GVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN----EGFSGGEKKRNEILQMALLDSELA 173 (252)
T ss_pred cccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----cCCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999998765321110 0111222335577888988886 34443321 249999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCEEEEEecCcEEEEeCCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~-~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+|||||+|||+.++..+.+.|++++++|+|||++||+++. +... +|++++|. +|++++.|+..
T Consensus 174 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~-~G~i~~~~~~~ 237 (252)
T CHL00131 174 ILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQ-NGKIIKTGDAE 237 (252)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEe-CCEEEEecChh
Confidence 9999999999999999999999988779999999999763 4444 79999997 58999998753
No 403
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=317.57 Aligned_cols=203 Identities=26% Similarity=0.309 Sum_probs=168.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCC------C---CCCceEEEEeccCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE------F---VPPRTSAYVSQQDW 219 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~------~---~~~~~~~yv~Q~d~ 219 (1136)
.+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999998776 9999999987521 0 12356999999998
Q ss_pred CCCCCCHHHHHHHh-hhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccc
Q 001154 220 QVAEMTVRETLDFA-GQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTL 298 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~ 298 (1136)
+++.+||.||+.+. ....+... .+....++.+++.+||+...++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 89999999999752 11111000 00112467889999998776665
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+ +.|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++... +++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~--~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAET--GITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhcCEE
Confidence 4 469999999999999999999999999999999999999999999988642 456667888889999999999
Q ss_pred EEEcCCeEEEecChhhH
Q 001154 379 ILLSEGQIVYQGPRVSV 395 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~ 395 (1136)
++|.+|++++.|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999987654
No 404
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=357.23 Aligned_cols=209 Identities=22% Similarity=0.369 Sum_probs=165.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1136)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 36999999999999999999999999999999999999886 9999999999876543 467999999998776 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
|++|||.++..- ....+.+.+++ +.. -.++.++ .|++..||.+|+. .
T Consensus 432 Ti~~Ni~~~~~~---~~~~~~i~~al------------------~~~---------~l~~~i~--~lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYARTE---QYSREQIEEAA------------------RMA---------YAMDFIN--KMDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCCC---CCCHHHHHHHH------------------HHh---------CcHHHHH--hcccccCceeCCC-C
Confidence 999999875210 00001111111 000 0112222 2667789999975 4
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
..||||||||++|||||+.+|++|+||||||+||+.++..+.+.|+++.. ++|+|+ ++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~-VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLV-IAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEE-Eecch-HHHHhCCEEEEEECC
Confidence 67999999999999999999999999999999999999999999998743 345554 55555 456789999999999
Q ss_pred eEEEecChhhHHH
Q 001154 385 QIVYQGPRVSVLD 397 (1136)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1136)
+++..|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999988864
No 405
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=322.04 Aligned_cols=206 Identities=24% Similarity=0.406 Sum_probs=164.8
Q ss_pred ceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCC--CCCc
Q 001154 841 RLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLT 918 (1136)
Q Consensus 841 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lt 918 (1136)
++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.....++.++|++|++.+. ...+
T Consensus 19 ~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~i~~v~q~~~~~~~~~~~ 96 (272)
T PRK15056 19 GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPTRQALQKNLVAYVPQSEEVDWSFPVL 96 (272)
T ss_pred CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEhHHhhccceEEEeccccccccCCCcc
Confidence 3579999999999999999999999999999999999876 46899999998764332334699999997652 2347
Q ss_pred HHHHHHHHhhhcC-CCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 919 VLESLLFSAWLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 919 v~e~l~~~~~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
+++++.+...... ..........+.++++++.+++.+..+..+ ..||||||||++|||||+.+|+||+|||||+
T Consensus 97 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG~~qrv~laraL~~~p~llllDEPt~ 171 (272)
T PRK15056 97 VEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGGQKKRVFLARAIAQQGQVILLDEPFT 171 (272)
T ss_pred hhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 8888865321100 000111223445778899999987766543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGS 1056 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~ 1056 (1136)
|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|+++++ + |++++.|+..+
T Consensus 172 ~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g~~~~ 227 (272)
T PRK15056 172 GVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASGPTET 227 (272)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHHh
Confidence 99999999999999999877999999999976 467889998766 4 79999887643
No 406
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-34 Score=315.71 Aligned_cols=211 Identities=22% Similarity=0.279 Sum_probs=169.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCC-----CCCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.+.+. .+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35999999999999999999999999999999999998642 13599999999887532 124579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++ .||+||+.++....+.... ......+.++++.+||.+..++..
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKDK---------------------------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 77 6999999886432111000 001123667888888864322222
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+...+.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.++||++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--N-YTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhcCEEEE
Confidence 234567999999999999999999999999999999999999999999998853 3 5666688888899999999999
Q ss_pred EcCCeEEEecChhhHH
Q 001154 381 LSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1136)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 407
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-34 Score=315.87 Aligned_cols=210 Identities=20% Similarity=0.252 Sum_probs=166.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC--CCcceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
++|+|+|++|++|++++|+|||||||||||++|+|.+. |..+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 59999999999999999999999999999999999986 2123589999999887421 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+ .||+||+.+.......... .....+++++++.+||........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLSR---------------------------------AEMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCCH---------------------------------HHHHHHHHHHHHHcCCChhhHHHH-h
Confidence 7 8999999876432110000 001123677888888743111111 1
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
.....||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.. + ++|+.++|+..++.+++|++++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--D-YTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCCEEEEE
Confidence 23457999999999999999999999999999999999999999999998853 3 56667888888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|+++..|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987764
No 408
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=320.36 Aligned_cols=204 Identities=26% Similarity=0.346 Sum_probs=168.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-----CCceEEEEeccCC-CCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDW-QVA 222 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 222 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 15 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 15 PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 5999999999999999999999999999999999999876 999999999874211 1356999999974 345
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
..|+.||+.+.....+... .+....++.+++.+||.+..++.+
T Consensus 92 ~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI--- 134 (271)
T ss_pred cccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc---
Confidence 5689999987543221100 001123677899999987776655
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++.. +++|+.++|+..++.+++|++++|+
T Consensus 135 --~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~--g~tii~vtH~~~~~~~~~d~i~~l~ 210 (271)
T PRK13638 135 --QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQ--GNHVIISSHDIDLIYEISDAVYVLR 210 (271)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998753 4566678899999999999999999
Q ss_pred CCeEEEecChhhHH
Q 001154 383 EGQIVYQGPRVSVL 396 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1136)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (271)
T PRK13638 211 QGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999987764
No 409
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=9.4e-33 Score=345.86 Aligned_cols=123 Identities=23% Similarity=0.342 Sum_probs=97.3
Q ss_pred CCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCEEE
Q 001154 916 GLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVA---NPSIVF 991 (1136)
Q Consensus 916 ~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~---~p~ill 991 (1136)
.+||.|.+.|...+. . .....++++.++|... .+.. ...|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~------i~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---S------ISRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---c------hhHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 456666666643321 0 0123567888888643 3332 35799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe-----cCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK-----RGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~-----~gG~~~~~g~~ 1054 (1136)
|||||+|||+.....+++.|+++.++|.|||+++|++. ..+.+|++++|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 446799999994 57999999875
No 410
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-34 Score=311.85 Aligned_cols=206 Identities=26% Similarity=0.347 Sum_probs=173.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-CCceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 226 (1136)
+++++|+|++++||++++|+||||||||||+++|+|.+++. +|+|+++|+++.... .++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999876 899999999876432 24679999999988889999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.+.....+... ......++.+++.+||++..++.+ ..
T Consensus 90 ~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (232)
T cd03300 90 FENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQ 130 (232)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999987643321100 001224678899999987777655 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|++++... +.+|+.++|...++.+++|++++|.+|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~-~~tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKEL-GITFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987533 45566677888899999999999999999
Q ss_pred EEecChhhHH
Q 001154 387 VYQGPRVSVL 396 (1136)
Q Consensus 387 v~~G~~~~~~ 396 (1136)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999876653
No 411
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.9e-34 Score=355.57 Aligned_cols=208 Identities=27% Similarity=0.386 Sum_probs=170.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1136)
+++|+|+|+.++|||.++|+||||||||||++.|.|.+++. +|+|.+||.++.+... ++.++||+|++.+|. .
T Consensus 342 ~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~ 417 (567)
T COG1132 342 KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-G 417 (567)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-c
Confidence 46999999999999999999999999999999999999886 9999999999887653 578999999999887 7
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||+|||.++..- ...+.+.++++.. ...+.+. .|++++||.||+ ..
T Consensus 418 TI~~NI~~g~~~----at~eei~~a~k~a---------------------------~~~d~I~--~lp~g~dt~vge-~G 463 (567)
T COG1132 418 TIRENIALGRPD----ATDEEIEEALKLA---------------------------NAHEFIA--NLPDGYDTIVGE-RG 463 (567)
T ss_pred cHHHHHhcCCCC----CCHHHHHHHHHHh---------------------------ChHHHHH--hCcccccceecC-CC
Confidence 999999986321 0111122222110 0222222 357789999995 44
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
.+||||||||++||||++.+|++|+||||||+||+.+...|.+.++++.+ ++|+++ +.|..+.+.+ +|+|++|++|
T Consensus 464 ~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~ii-IaHRlsti~~-aD~IiVl~~G 539 (567)
T COG1132 464 VNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLI-IAHRLSTIKN-ADRIIVLDNG 539 (567)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEE-EeccHhHHHh-CCEEEEEECC
Confidence 57999999999999999999999999999999999999999999997653 456666 6676665555 9999999999
Q ss_pred eEEEecChhhHHH
Q 001154 385 QIVYQGPRVSVLD 397 (1136)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1136)
++++.|++++++.
T Consensus 540 ~i~e~G~h~eLl~ 552 (567)
T COG1132 540 RIVERGTHEELLA 552 (567)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 412
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=315.02 Aligned_cols=200 Identities=25% Similarity=0.376 Sum_probs=167.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5999999999999999999999999999999999998776 999999998765432 2457999999987776 69
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccccccCccC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGDEML 304 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~vg~~~~ 304 (1136)
|+||+.+.....+ . ...+++.+++.+||+ +..++. .
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATRD-----V 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhCC-----c
Confidence 9999977432110 0 011356788889996 444543 4
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
..|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKM-NLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhC-CCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 5699999999999999999999999999999999999999999999886533 456666889999999999999999999
Q ss_pred eEEEecChhhHH
Q 001154 385 QIVYQGPRVSVL 396 (1136)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1136)
+++..|+.+++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999887763
No 413
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-34 Score=318.16 Aligned_cols=205 Identities=20% Similarity=0.287 Sum_probs=169.7
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCC-CCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDW-QVAE 223 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 223 (1136)
..+|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|+++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999876 999999998875422 2467999999974 6778
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
.||.|||.++....+.. + . ....+++.+++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------~------------------------~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------E------------------------EMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------H------------------------HHHHHHHHHHHHCCCHhHhhCCc----
Confidence 89999998754321110 0 0 00124678899999987766654
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKY-QLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999887532 455666888888886 6999999999
Q ss_pred CeEEEecChhhHH
Q 001154 384 GQIVYQGPRVSVL 396 (1136)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1136)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 414
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-34 Score=312.30 Aligned_cols=204 Identities=27% Similarity=0.414 Sum_probs=171.8
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-CCceEEEEeccCCCCCCCCHHH
Q 001154 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRE 228 (1136)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 228 (1136)
+|+|+|++|+||++++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++.+||.|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999998876 999999998876532 2457999999998899999999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 001154 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1136)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LS 308 (1136)
|+.++....+... . .....+.++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~--------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK--------------------K--------------EIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH--------------------H--------------HHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9987643221000 0 00123667888999987777665 4699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001154 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1136)
Q Consensus 309 GGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 388 (1136)
|||||||+||+|++.+|++++|||||+|||+.++.++.+.|++++... +++++.++|..+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999986533 4556667788889999999999999999999
Q ss_pred ecChhhHH
Q 001154 389 QGPRVSVL 396 (1136)
Q Consensus 389 ~G~~~~~~ 396 (1136)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99887664
No 415
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.7e-34 Score=315.55 Aligned_cols=197 Identities=25% Similarity=0.383 Sum_probs=166.4
Q ss_pred EEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCcHH
Q 001154 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTVL 920 (1136)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ltv~ 920 (1136)
+|+|+||++++||++||+|+||||||||+++|+|..+ .+|+|.++|.++.. ..+++.+||++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7899999999999999999999999999999999864 27999999987642 23345689999998888889999
Q ss_pred HHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 001154 921 ESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVA-------NPSIVFMD 993 (1136)
Q Consensus 921 e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~-------~p~illLD 993 (1136)
||+.+....+ .......+.++++++.+++.+..+... ..||+|||||++||+||+. +|++|+||
T Consensus 88 ~nl~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPDK----TRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCccC----CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 9998753211 112233456788999999976665543 4799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 994 EPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 994 EPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+|||+.++..+++.|++++++|.|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLK-QGKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 999999999999999999999777999999999976 4778899999998 4799988875
No 416
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.1e-34 Score=318.29 Aligned_cols=196 Identities=26% Similarity=0.415 Sum_probs=154.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCc
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.+||++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 469999999999999999999999999999999999876 468999999986532 334667999999987764 69
Q ss_pred HHHHHHHHhhhcCCCcccHHHHH-----HHHHHHHHHc--CCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 919 VLESLLFSAWLRLPSEIELETQR-----AFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
|.||+.+... . ....... ...++.++.+ ++....+. .+.+|||||||||+|||||+.+|++|+
T Consensus 92 v~~nl~~~~~--~---~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP--G---MSMERVIEAAKLAGAHDFISELPEGYDTIVGE-----QGAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC--C---CCHHHHHHHHHHcCcHHHHHhCcccccchhhc-----CCCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999987431 0 1111100 0112233332 22222222 235899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|++++ +|+|||++||+++ .+ +.+|++++|.+ |++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999986 4899999999986 34 56999999984 799998874
No 417
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=320.31 Aligned_cols=216 Identities=22% Similarity=0.302 Sum_probs=173.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC--------CCceEEEEeccCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV--------PPRTSAYVSQQDW 219 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~--------~~~~~~yv~Q~d~ 219 (1136)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 35999999999999999999999999999999999998775334699999998764321 1356899999998
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLV 299 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~v 299 (1136)
+++.+||+||+.+...... . . ... ..+.. ..+...+++++++.+||++..|..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-~------~~~--~~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-F------WRT--CFSWF---------------TREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-c------hhh--hcccc---------------cHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 8999999999987532100 0 0 000 00000 0011235788999999987777655
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
+ .|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++..++|+|+
T Consensus 151 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 S-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred c-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4 599999999999999999999999999999999999999999999987543 4667778899999999999999
Q ss_pred EEcCCeEEEecChhhH
Q 001154 380 LLSEGQIVYQGPRVSV 395 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~ 395 (1136)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999987664
No 418
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=319.64 Aligned_cols=209 Identities=27% Similarity=0.367 Sum_probs=171.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1136)
+++|+|+|+++++|++++|+||||||||||+++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999998775 999999998764332 235699999998888899
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||.||+.+...... .. . +. .. ......++.+++.+||++..++.++
T Consensus 101 tv~e~l~~~~~~~~-~~-~-------------~~-~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 146 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA-L-------------GR-FG--------------AADREKVEEAISLVGLKPLAHRLVD---- 146 (265)
T ss_pred cHHHHHHhCccccc-cc-c-------------cC-CC--------------HHHHHHHHHHHHHcCCHHHhcCCcc----
Confidence 99999987532100 00 0 00 00 0012246788999999876676654
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++.+++|+|++|++|
T Consensus 147 -~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 147 -SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 599999999999999999999999999999999999999999999987533 456666888999999999999999999
Q ss_pred eEEEecChhhH
Q 001154 385 QIVYQGPRVSV 395 (1136)
Q Consensus 385 ~iv~~G~~~~~ 395 (1136)
++++.|+.+++
T Consensus 225 ~i~~~~~~~~~ 235 (265)
T PRK10575 225 EMIAQGTPAEL 235 (265)
T ss_pred eEEEecCHHHh
Confidence 99999988765
No 419
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=319.54 Aligned_cols=218 Identities=22% Similarity=0.268 Sum_probs=170.3
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISG 892 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 892 (1136)
.+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~-------------~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFY-------------GGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEe-------------CCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 45666665543 3457999999999999999999999999999999999975321 2489999999
Q ss_pred ccCCh-----hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCC
Q 001154 893 YPKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGIN 967 (1136)
Q Consensus 893 ~~~~~-----~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~ 967 (1136)
.++.. ..+++.++|++|++.+++. |+.||+.+....+. .. ...++.++++++.+++......... ..+.
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 160 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLK-EKGT 160 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhc-CCcc
Confidence 87532 2345679999999888764 99999987643221 11 1122345677777776421111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe----
Q 001154 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK---- 1043 (1136)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~---- 1043 (1136)
.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 161 ~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~~ 238 (274)
T PRK14265 161 ALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEID 238 (274)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999864 799999999986 5778899999997
Q ss_pred ----cCcEEEEeCCC
Q 001154 1044 ----RGGELIYAGPL 1054 (1136)
Q Consensus 1044 ----~gG~~~~~g~~ 1054 (1136)
+.|++++.|+.
T Consensus 239 ~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 239 EYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccCceEEEeCCH
Confidence 25899999986
No 420
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.9e-34 Score=353.93 Aligned_cols=199 Identities=24% Similarity=0.311 Sum_probs=165.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1136)
++|+|+|++++||+.++|+|+||||||||+++|+|+++|. +|+|.+||.++++... ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999887 9999999999876543 5789999999998875 9
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhC-------Cccccccc
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILG-------LDTCADTL 298 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lg-------L~~~~dt~ 298 (1136)
++|||.++.. ...+. ++.+++..| |++..||.
T Consensus 431 i~~NI~~~~~-----~~d~~------------------------------------i~~a~~~~gl~~~i~~lp~Gldt~ 469 (592)
T PRK10790 431 FLANVTLGRD-----ISEEQ------------------------------------VWQALETVQLAELARSLPDGLYTP 469 (592)
T ss_pred HHHHHHhCCC-----CCHHH------------------------------------HHHHHHHcCcHHHHHhcccccccc
Confidence 9999988521 00011 222222222 56678999
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+|+. ..+||||||||++|||||+.+|+|++||||||+||+.+...|.+.|+++.. ++|+|+ ++|.. +....||+|
T Consensus 470 i~e~-g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIi-vtHr~-~~l~~~D~i 544 (592)
T PRK10790 470 LGEQ-GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVV-IAHRL-STIVEADTI 544 (592)
T ss_pred ccCC-CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEE-Eecch-HHHHhCCEE
Confidence 9974 457999999999999999999999999999999999999999999998753 455555 44544 456679999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 001154 379 ILLSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~~ 397 (1136)
++|++|+++..|+++++.+
T Consensus 545 i~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 545 LVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred EEEECCEEEEEcCHHHHHh
Confidence 9999999999999998863
No 421
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=319.09 Aligned_cols=209 Identities=24% Similarity=0.372 Sum_probs=172.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1136)
..+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 36999999999999999999999999999999999998776 9999999987754321 35699999999888889
Q ss_pred CHHHHHHHhhhhc-CCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCcc
Q 001154 225 TVRETLDFAGQCQ-GVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEM 303 (1136)
Q Consensus 225 TV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~ 303 (1136)
||+||+.+...-. ...... + +.....++.+++.+||++..++.+
T Consensus 97 tv~~~~~~~~~~~~~~~~~~----------------~---------------~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (265)
T PRK10253 97 TVQELVARGRYPHQPLFTRW----------------R---------------KEDEEAVTKAMQATGITHLADQSV---- 141 (265)
T ss_pred cHHHHHHhCcccccccccCC----------------C---------------HHHHHHHHHHHHHcCCHHHhcCCc----
Confidence 9999998752100 000000 0 001224678899999987666654
Q ss_pred CCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001154 304 LKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSE 383 (1136)
Q Consensus 304 ~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~ 383 (1136)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|++++|++
T Consensus 142 -~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~ 219 (265)
T PRK10253 142 -DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALRE 219 (265)
T ss_pred -ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999987532 45666788999999999999999999
Q ss_pred CeEEEecChhhHH
Q 001154 384 GQIVYQGPRVSVL 396 (1136)
Q Consensus 384 G~iv~~G~~~~~~ 396 (1136)
|++++.|+.+++.
T Consensus 220 G~i~~~g~~~~~~ 232 (265)
T PRK10253 220 GKIVAQGAPKEIV 232 (265)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999987764
No 422
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.7e-34 Score=309.60 Aligned_cols=188 Identities=28% Similarity=0.348 Sum_probs=157.0
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCc
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+++..+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+.....+++.++|++|++.+++.+|
T Consensus 12 ~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~t 89 (207)
T PRK13539 12 RGGRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALT 89 (207)
T ss_pred ECCeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCc
Confidence 345679999999999999999999999999999999999876 468999999986532225667899999988888999
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSG 998 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsg 998 (1136)
++||+.+....+. .. .+.++++++.+++.+..+... ..||||||||++|||||+.+|++|||||||+|
T Consensus 90 v~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~ 157 (207)
T PRK13539 90 VAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRRVALARLLVSNRPIWILDEPTAA 157 (207)
T ss_pred HHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999987543321 11 134688999999976655433 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 001154 999 LDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1136)
Q Consensus 999 LD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~ 1043 (1136)
||+.++..+++.|++++++|+|||++||++. .... |+++.+.
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~--~~~~-~~~~~~~ 199 (207)
T PRK13539 158 LDAAAVALFAELIRAHLAQGGIVIAATHIPL--GLPG-ARELDLG 199 (207)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeCCch--hhcc-CcEEeec
Confidence 9999999999999998778999999999975 3333 8887764
No 423
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8.9e-33 Score=349.16 Aligned_cols=210 Identities=22% Similarity=0.404 Sum_probs=173.4
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.++|++|.++ .++.+|+|+|++|+||+.+||+|+||||||||+++|+|... +.+|+|++||.++
T Consensus 473 ~I~~~~vsf~y~------------~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYG------------YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcC------------CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEEH
Confidence 578888887763 12469999999999999999999999999999999999877 5689999999876
Q ss_pred C---hhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 001154 896 R---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1136)
Q Consensus 896 ~---~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1136)
+ ...+++.+|||+|++.+++. |++||+.++.. + +.+ ++.++++++..++.+. .|+.++..
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~---~-~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~- 608 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK---E-NVS----QDEIWAACEIAEIKDDIENMPLGYQTELSEE- 608 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC---C-CCC----HHHHHHHHHHhCCHHHHHhcccccCcEecCC-
Confidence 4 35678899999999998865 99999987521 1 122 2335667776666442 24445543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
+.+||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++ +|+|+|++||+++ ..+.+|++++|++
T Consensus 609 G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 609 GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999985 5899999999975 5678999999985
Q ss_pred cEEEEeCCC
Q 001154 1046 GELIYAGPL 1054 (1136)
Q Consensus 1046 G~~~~~g~~ 1054 (1136)
|+++..|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 799999874
No 424
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-34 Score=311.81 Aligned_cols=201 Identities=22% Similarity=0.379 Sum_probs=169.0
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-CCceEEEEeccCCCCCCCCHHHHHH
Q 001154 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRETLD 231 (1136)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E~l~ 231 (1136)
|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.+++.+||.||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999998876 999999998875432 2357999999998899999999998
Q ss_pred HhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhh
Q 001154 232 FAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQ 311 (1136)
Q Consensus 232 f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGq 311 (1136)
+.... ... .. .....+++++++.+||++..++.+. .|||||
T Consensus 94 ~~~~~-~~~--~~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--LN-------------------------------AAQREKLHAIARQMGIEDLLARLPG-----QLSGGQ 134 (232)
T ss_pred ccccc-ccC--CC-------------------------------HHHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHH
Confidence 75321 000 00 0012247788999999887777654 699999
Q ss_pred hhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecC
Q 001154 312 KKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGP 391 (1136)
Q Consensus 312 kkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~ 391 (1136)
||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++.+++|++++|.+|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999886533 4556668888999999999999999999999999
Q ss_pred hhhHH
Q 001154 392 RVSVL 396 (1136)
Q Consensus 392 ~~~~~ 396 (1136)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 87764
No 425
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=319.40 Aligned_cols=217 Identities=23% Similarity=0.261 Sum_probs=168.8
Q ss_pred eeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC--C-ceeEEEEEEcCc
Q 001154 817 MAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGY 893 (1136)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~ 893 (1136)
+.++|+++.+ ++..+|+|+||+|++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|.
T Consensus 25 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~ 91 (271)
T PRK14238 25 FDTQNLNLWY-------------GEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQ 91 (271)
T ss_pred EEEeeeEEEE-------------CCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCE
Confidence 5666666544 33469999999999999999999999999999999999754 1 136899999998
Q ss_pred cCCh-----hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCC
Q 001154 894 PKRQ-----ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGIN 967 (1136)
Q Consensus 894 ~~~~-----~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~ 967 (1136)
++.. ..+++.+||++|++.+++ .|++||+.+....+.. ......++.+.++++.+++.. +.+.. . ..+.
T Consensus 92 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~l~~~~-~-~~~~ 166 (271)
T PRK14238 92 NIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHGI--KDKKTLDEIVEKSLRGAAIWDELKDRL-H-DNAY 166 (271)
T ss_pred EcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchHHHHH-h-cCcc
Confidence 7632 234667999999988877 4999999876432211 111222344567777665421 21111 1 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 968 GLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 968 ~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
.||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 167 ~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~~-G~ 243 (271)
T PRK14238 167 GLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFLN-GY 243 (271)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 799999999976 46678999999985 78
Q ss_pred EEEeCCC
Q 001154 1048 LIYAGPL 1054 (1136)
Q Consensus 1048 ~~~~g~~ 1054 (1136)
+++.|+.
T Consensus 244 i~~~g~~ 250 (271)
T PRK14238 244 VNEYDDT 250 (271)
T ss_pred EEEeCCH
Confidence 9988874
No 426
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2e-34 Score=323.27 Aligned_cols=236 Identities=27% Similarity=0.390 Sum_probs=187.6
Q ss_pred HhcCCCCCCcEEEEeeeEEEEEEecCCCCCCChhhHHHHHHHHHHHHHhHhcCCCcceeeeeceeEEEeCCeEEEEEcCC
Q 001154 91 EAVDLELPKIEVRFQNLTVESFVHLGSRALPTIPNFIFNMTEALLRQLRIYRGNRSKLTILDDLSGIIRPSRLTLLLGPP 170 (1136)
Q Consensus 91 ~~~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~ 170 (1136)
+++.++-|+-.+..|++++- | ...++++|+|+||.+.+|+-++|+|||
T Consensus 324 ~~m~LP~P~g~L~Ve~l~~~----------P----------------------Pg~~~pil~~isF~l~~G~~lgIIGPS 371 (580)
T COG4618 324 ERMPLPAPQGALSVERLTAA----------P----------------------PGQKKPILKGISFALQAGEALGIIGPS 371 (580)
T ss_pred CCCCCCCCCceeeEeeeeec----------C----------------------CCCCCcceecceeEecCCceEEEECCC
Confidence 35666777778888888851 1 112357999999999999999999999
Q ss_pred CCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCCCHHHHHHHhhhhcCCCCchhhhH
Q 001154 171 SSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTVRETLDFAGQCQGVGSKYDMIT 247 (1136)
Q Consensus 171 GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~ 247 (1136)
|||||||.++|.|...|. +|.|.++|.+++.... -+.+||.||+--+|+ .||.|||. |+.. ....+.+.
T Consensus 372 gSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf~~-~~d~~kIi 443 (580)
T COG4618 372 GSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RFGE-EADPEKVI 443 (580)
T ss_pred CccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hccc-cCCHHHHH
Confidence 999999999999998775 9999999999887654 478999999988777 49999994 3221 11112222
Q ss_pred HHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCChhhhhHHHHHHHHhCCCcE
Q 001154 248 ELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGISGGQKKRLTTGELLVGPARV 327 (1136)
Q Consensus 248 ~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~v 327 (1136)
++++. .+ +.++ ++.|++.+||.||+. ..+||||||||+++||||+++|.+
T Consensus 444 eAA~l---------------------Ag------vHel--Il~lP~GYdT~iG~~-G~~LSgGQRQRIaLARAlYG~P~l 493 (580)
T COG4618 444 EAARL---------------------AG------VHEL--ILRLPQGYDTRIGEG-GATLSGGQRQRIALARALYGDPFL 493 (580)
T ss_pred HHHHH---------------------cC------hHHH--HHhCcCCccCccCCC-CCCCCchHHHHHHHHHHHcCCCcE
Confidence 22211 11 1121 467999999999975 458999999999999999999999
Q ss_pred eEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecChhhHHHHH
Q 001154 328 LFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVYQGPRVSVLDFF 399 (1136)
Q Consensus 328 lllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~F 399 (1136)
++||||-|+||+.....+.+.|.+... .|+++|++. |.+.+...+|+|++|++|++..+|++++++...
T Consensus 494 vVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvvia--HRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 494 VVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVIA--HRPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEEe--cCHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 999999999999999999999998765 355555533 356788999999999999999999999998754
No 427
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.9e-35 Score=317.92 Aligned_cols=200 Identities=27% Similarity=0.384 Sum_probs=155.5
Q ss_pred EEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCcH
Q 001154 843 QLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 843 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|+
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 68999999999999999999999999999999999876 468999999976532 334567999999988776 699
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHc--CCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELV--ELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l--~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
+||+.+..................+++.++.+ ++....+. .+..||+|||||++|||||+.+|++|+|||||+
T Consensus 93 ~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~ 167 (234)
T cd03251 93 AENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGE-----RGVKLSGGQRQRIAIARALLKDPPILILDEATS 167 (234)
T ss_pred HHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeecc-----CCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccc
Confidence 99998753211000000000011223444444 34433332 245799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+.+.|+++. +|.|||++||+++ ++ +.+|++++|.+ |++++.|+.
T Consensus 168 ~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 168 ALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred cCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 999999999999999986 4899999999986 34 45999999985 688888764
No 428
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=318.23 Aligned_cols=207 Identities=21% Similarity=0.255 Sum_probs=163.9
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC--c-eeEEEEEEcCccCC-----hhcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-IIEGDIYISGYPKR-----QETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~~~~-----~~~~~~~~gyv~Q~~ 911 (1136)
++..+|+|+|++|++||++||+|+||||||||+++|+|.... . +.+|+|.++|.++. ...+++.+||++|++
T Consensus 21 ~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 100 (264)
T PRK14243 21 GSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVEVRRRIGMVFQKP 100 (264)
T ss_pred CCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHHHhhhEEEEccCC
Confidence 345799999999999999999999999999999999997431 1 25899999998753 123466799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++ .|+.||+.+....+. .. ....+.+.++++.+++.+..+.... ..+..||||||||++|||||+.+|+|||
T Consensus 101 ~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LSgGq~qrv~laral~~~p~lll 174 (264)
T PRK14243 101 NPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGLSLSGGQQQRLCIARAIAVQPEVIL 174 (264)
T ss_pred cccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8887 499999987643221 11 1223445667777776421111111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec--------CcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR--------GGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~--------gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ .|+++..|+.
T Consensus 175 LDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 175 MDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccccccccCceEEEeCCH
Confidence 9999999999999999999999865 589999999986 57888999999972 4799998875
No 429
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-34 Score=316.06 Aligned_cols=212 Identities=22% Similarity=0.311 Sum_probs=168.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCC--C---CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKE--F---VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~~~ 221 (1136)
++|+|+|+++++|++++|+||||||||||+++|+|.++|. .+.+|+|+++|+++.. . ..++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5999999999999999999999999999999999998752 1348999999988752 1 1235799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+.+||.||+.++....+.....+ .....++++++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSKK--------------------------------ELDERVEWALKKAALWDEVKDRL-N 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCHH--------------------------------HHHHHHHHHHHHcCCccchhhhh-c
Confidence 99999999988643221100000 00123667788888743111111 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
.....|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ + .+|+.++|+.+++..++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999854 3 56667889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 430
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.6e-34 Score=318.25 Aligned_cols=207 Identities=22% Similarity=0.261 Sum_probs=169.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCC--CCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDW--QVA 222 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 222 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999876 9999999988753211 246999999974 567
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-ccccccccC
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTLVGD 301 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~vg~ 301 (1136)
.+||.+++.+..+....... ......++.+++.+||. ...++.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLEP---------------------------------EQREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCChHHHhcCc--
Confidence 88999999875432210000 00112467889999994 5555544
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+.+++..+||++++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 4699999999999999999999999999999999999999999999987532 456666888999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999887764
No 431
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.1e-34 Score=316.70 Aligned_cols=204 Identities=26% Similarity=0.307 Sum_probs=163.5
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCcc-----CCh---h----cccceEEEe
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP-----KRQ---E----TFARISGYC 907 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~-----~~~---~----~~~~~~gyv 907 (1136)
++..+|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+ +.. . ..++.++|+
T Consensus 14 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~ 91 (253)
T TIGR02323 14 GGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGAELELYQLSEAERRRLMRTEWGFV 91 (253)
T ss_pred CCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccccccccccCCHHHHHHhhhcceEEE
Confidence 44568999999999999999999999999999999999876 468999999976 321 1 123568999
Q ss_pred ccCCC--CCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc-cccccccCCCCCCCCHHHHHHHHHHHHHh
Q 001154 908 EQNDI--HSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS-LSGALIGLPGINGLSTEQRKRLTIAVELV 984 (1136)
Q Consensus 908 ~Q~~~--~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~-~~~~~~~~~~~~~LSgGqrqrl~ia~aL~ 984 (1136)
+|++. +.+.+|+.||+.+..... .. .......+.++++++.+++.+ ..+.. +..||||||||++|||||+
T Consensus 92 ~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~-----~~~LSgG~~qrv~laral~ 164 (253)
T TIGR02323 92 HQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL-----PRAFSGGMQQRLQIARNLV 164 (253)
T ss_pred EeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-----chhcCHHHHHHHHHHHHHh
Confidence 99874 445678999986542111 10 011123456788999999863 44443 3579999999999999999
Q ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 985 ANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 985 ~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 165 ~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 165 TRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLLVMQQ-GRVVESGLT 233 (253)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999999999998654 899999999976 46678999999984 799988874
No 432
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=5.7e-34 Score=307.12 Aligned_cols=199 Identities=21% Similarity=0.313 Sum_probs=166.3
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC-CCceEEEEeccCCCCCCCCHHH
Q 001154 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV-PPRTSAYVSQQDWQVAEMTVRE 228 (1136)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 228 (1136)
+++|+|+++++|++++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 457999999999999999999999999999999998876 999999998875432 3467999999999899999999
Q ss_pred HHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCCCC
Q 001154 229 TLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKGIS 308 (1136)
Q Consensus 229 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~LS 308 (1136)
|+.+...... ... .....+++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987432100 000 001224677899999987766655 4699
Q ss_pred hhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001154 309 GGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQIVY 388 (1136)
Q Consensus 309 GGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~iv~ 388 (1136)
||||||++||+|++.+|++++|||||+|||..++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999998653 25666678899999999999999999999998
Q ss_pred ecC
Q 001154 389 QGP 391 (1136)
Q Consensus 389 ~G~ 391 (1136)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 433
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=317.13 Aligned_cols=208 Identities=25% Similarity=0.367 Sum_probs=171.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1136)
.++|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999998775 999999998765432 235699999998888889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||.||+.++..... ..+. ..+ ......++++++.+||++..++.+
T Consensus 92 tv~~~i~~~~~~~~--~~~~-------------~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~----- 136 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLWG-------------RLS---------------AEDNARVNQAMEQTRINHLADRRL----- 136 (255)
T ss_pred cHHHHHHhccchhh--hhcc-------------CCC---------------HHHHHHHHHHHHHcCCHHHHcCCc-----
Confidence 99999988531000 0000 000 001234678899999987777655
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
..|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++... +++|+.++|+..++.+++|++++|++|
T Consensus 137 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~--~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 137 TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQ--GKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 469999999999999999999999999999999999999999999988653 456667889999999999999999999
Q ss_pred eEEEecChhhH
Q 001154 385 QIVYQGPRVSV 395 (1136)
Q Consensus 385 ~iv~~G~~~~~ 395 (1136)
++++.|+.+++
T Consensus 215 ~i~~~~~~~~~ 225 (255)
T PRK11231 215 HVMAQGTPEEV 225 (255)
T ss_pred eEEEEcCHHHh
Confidence 99999988765
No 434
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=314.94 Aligned_cols=209 Identities=25% Similarity=0.303 Sum_probs=165.2
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc----eeEEEEEEcCccCC---hhcccceEEEeccCC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG----IIEGDIYISGYPKR---QETFARISGYCEQND 911 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~----~~~G~i~i~g~~~~---~~~~~~~~gyv~Q~~ 911 (1136)
++++.+|+|+||++.+||++||+|+||||||||+++|+|...+. .+.|++.++|.+.. ...+++.++|++|++
T Consensus 20 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~~~q~~ 99 (257)
T PRK14246 20 INDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGMVFQQP 99 (257)
T ss_pred cCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHhcceEEEccCC
Confidence 35678999999999999999999999999999999999976521 12355555555542 223466799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-GALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+++.+|++||+.+....... ....+.++.++++++.+++.+.. +.... .+..||+|||||++|||||+.+|++|
T Consensus 100 ~~~~~~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~LS~G~~qrl~laral~~~P~ll 175 (257)
T PRK14246 100 NPFPHLSIYDNIAYPLKSHGI--KEKREIKKIVEECLRKVGLWKEVYDRLNS--PASQLSGGQQQRLTIARALALKPKVL 175 (257)
T ss_pred ccCCCCcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCCccchhhhcC--CcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999999999886432211 12233445678899999985421 11111 23579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.+|++++|+ +|+++..|+.
T Consensus 176 llDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~-~g~i~~~g~~ 236 (257)
T PRK14246 176 LMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLY-NGELVEWGSS 236 (257)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 99999999999999999999999864 799999999976 4667899999998 5799988875
No 435
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2e-34 Score=310.87 Aligned_cols=195 Identities=24% Similarity=0.356 Sum_probs=162.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-----CCCceEEEEeccCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQVA 222 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 222 (1136)
..+|+++|++++||++++|+|||||||||||++|+|.+++. +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 35999999999999999999999999999999999998776 99999999876421 12457999999998888
Q ss_pred CCCHHHHHHHhhh-hcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 223 EMTVRETLDFAGQ-CQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 223 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
.+||+||+.++.. .++.. . .+....++.+++.+||++..++.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~------~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 133 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS------K----------------------------AEAEERALELLEKVGLADKADAYP-- 133 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC------H----------------------------HHHHHHHHHHHHHcCCHhHhhhCc--
Confidence 9999999987532 11100 0 001223677889999987766655
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. +++|+.++|+..++.+++|++++|
T Consensus 134 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~--~~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 134 ---AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998752 455666889999999999999999
Q ss_pred cCCeE
Q 001154 382 SEGQI 386 (1136)
Q Consensus 382 ~~G~i 386 (1136)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 436
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.7e-34 Score=313.11 Aligned_cols=195 Identities=27% Similarity=0.436 Sum_probs=158.4
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCc
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+.+|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 469999999999999999999999999999999999876 468999999986532 234567999999988776 69
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcccccccc------CCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIG------LPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~------~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
+.||+.+.... .. ...+.++++.+++.+..+.... ...+..||||||||++|||||+.+|++|+|
T Consensus 94 v~e~l~~~~~~-----~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGAPL-----AD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCCCC-----CC----HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999764211 11 1235567788888765554321 012357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAG 1052 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g 1052 (1136)
||||+|||+.++..+++.|+++++ ++|||++||+++ ..+.+|++++|++ |++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~--~~~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLG-DKTLIIITHRPS--LLDLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH--HHHhCCEEEEEeC-CeEeecC
Confidence 999999999999999999999865 489999999976 3478999999985 6777653
No 437
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=323.12 Aligned_cols=205 Identities=20% Similarity=0.315 Sum_probs=167.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCC----C----CCCceEEEEeccCC-
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKE----F----VPPRTSAYVSQQDW- 219 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~----~----~~~~~~~yv~Q~d~- 219 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5999999999999999999999999999999999998776 9999999987642 1 12457999999974
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-cccccc
Q 001154 220 QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-TCADTL 298 (1136)
Q Consensus 220 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-~~~dt~ 298 (1136)
.+...||+||+.|.....+... ......++.+++.+||+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGENK----------------------------------QEAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhcCC
Confidence 2334699999988543211000 00012367788899995 455554
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+ ..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|..+++.++||++
T Consensus 148 ~-----~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 P-----FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred h-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEE
Confidence 4 4699999999999999999999999999999999999999999999887533 456666889999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 001154 379 ILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~ 396 (1136)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999987763
No 438
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.6e-34 Score=358.31 Aligned_cols=209 Identities=26% Similarity=0.413 Sum_probs=172.8
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.++|+++... +++++|+|+|++|+||+++||+||||||||||+++|+|.. + .+|+|.+||.++
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 588888875431 2357999999999999999999999999999999999987 3 489999999876
Q ss_pred Ch---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 001154 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1136)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1136)
.+ ..+++.++||+|++.++.. |++||+.++. + +.+. +.++++++..++.+. .|+.+|..+
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~----~-~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN----P-DASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC----C-CCCH----HHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 43 5678899999999998865 9999998752 1 2222 345666776666542 345565543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
..||||||||++|||||+++|+||+||||||+||+++.+.|++.|+++. +++|+|++||+++ ..+.+|++++|+ +
T Consensus 484 -~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~-~ 558 (588)
T PRK11174 484 -AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQ-D 558 (588)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEe-C
Confidence 5799999999999999999999999999999999999999999999875 5899999999975 567899999998 5
Q ss_pred cEEEEeCCC
Q 001154 1046 GELIYAGPL 1054 (1136)
Q Consensus 1046 G~~~~~g~~ 1054 (1136)
|+++..|+.
T Consensus 559 G~i~e~G~~ 567 (588)
T PRK11174 559 GQIVQQGDY 567 (588)
T ss_pred CeEeecCCH
Confidence 799998874
No 439
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.3e-34 Score=316.21 Aligned_cols=208 Identities=27% Similarity=0.403 Sum_probs=170.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1136)
..+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 36999999999999999999999999999999999998876 9999999988755322 34689999998778889
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||+||+.++..... . ... .+. .+...++..+++.+||.+..++.++
T Consensus 91 tv~e~l~~~~~~~~-~--------------~~~-~~~--------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (256)
T TIGR03873 91 TVRDVVALGRIPHR-S--------------LWA-GDS--------------PHDAAVVDRALARTELSHLADRDMS---- 136 (256)
T ss_pred CHHHHHHhcchhhh-h--------------hcc-CCC--------------HHHHHHHHHHHHHcCcHhhhcCCcc----
Confidence 99999987421000 0 000 000 0012246788999999876666554
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++... +++|+.++|+.+++.+++|+|++|++|
T Consensus 137 -~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 137 -TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAAT--GVTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 69999999999999999999999999999999999999999999998642 456777889999999999999999999
Q ss_pred eEEEecChhhH
Q 001154 385 QIVYQGPRVSV 395 (1136)
Q Consensus 385 ~iv~~G~~~~~ 395 (1136)
+++..|+.+++
T Consensus 214 ~i~~~g~~~~~ 224 (256)
T TIGR03873 214 RVVAAGPPREV 224 (256)
T ss_pred CEEEecCHHHh
Confidence 99999988765
No 440
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=8e-34 Score=310.95 Aligned_cols=206 Identities=27% Similarity=0.390 Sum_probs=172.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC-CceEEEEeccCCCCCCCCH
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP-PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 226 (1136)
+++|+|+|+++.+|++++|+||||||||||+++|+|.+++. +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999998775 9999999988754332 4579999999988889999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.+.....+... . .....++++++.++|....++.+ +.
T Consensus 90 ~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHPK--A--------------------------------KIKARVEELLELVQLEGLGDRYP-----NQ 130 (237)
T ss_pred HHHHHhHHHhcCCCH--H--------------------------------HHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 999987643221100 0 00123677889999977666654 46
Q ss_pred CChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001154 307 ISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQI 386 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~i 386 (1136)
||||||||++||++|+.+|++++|||||+|||..+...+.+.|++++.. .+.+|+.++|...++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~-~~~tvli~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDE-VHVTTVFVTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999988653 245566677888899999999999999999
Q ss_pred EEecChhhHH
Q 001154 387 VYQGPRVSVL 396 (1136)
Q Consensus 387 v~~G~~~~~~ 396 (1136)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999987764
No 441
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-34 Score=301.37 Aligned_cols=161 Identities=30% Similarity=0.444 Sum_probs=143.4
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh-----hcccceEEEeccCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ-----ETFARISGYCEQNDIHS 914 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~ 914 (1136)
+++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.++
T Consensus 11 ~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (178)
T cd03229 11 GQKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALF 88 (178)
T ss_pred CCeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccC
Confidence 34579999999999999999999999999999999999876 468999999987532 24567899999999888
Q ss_pred CCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 001154 915 PGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDE 994 (1136)
Q Consensus 915 ~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDE 994 (1136)
+..|++|++.+. ||+|||||++|||||+.+|++++|||
T Consensus 89 ~~~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDE 126 (178)
T cd03229 89 PHLTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDE 126 (178)
T ss_pred CCCCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 889999987531 89999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 995 PTSGLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 995 PTsgLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
||+|||+.++..+++.|++++++ |+|||++||++. .+.+.+|++++|++|
T Consensus 127 P~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 127 PTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 99999999999999999999876 899999999976 466689999999854
No 442
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=7.2e-34 Score=313.93 Aligned_cols=209 Identities=24% Similarity=0.306 Sum_probs=161.8
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChh---c-ccceEEEeccCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQE---T-FARISGYCEQNDIHSP 915 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~ 915 (1136)
+++.+|+|+|++|++|+++||+||||||||||+++|+|.....+.+|+|.++|.++... . .++.++|++|++.+++
T Consensus 12 ~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (248)
T PRK09580 12 EDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEIP 91 (248)
T ss_pred CCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhcc
Confidence 44579999999999999999999999999999999999842114689999999875321 1 2346999999998888
Q ss_pred CCcHHHHHHHHhh-hcC--CCc-ccHHHHHHHHHHHHHHcCCC-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 001154 916 GLTVLESLLFSAW-LRL--PSE-IELETQRAFVEEVMELVELT-SLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIV 990 (1136)
Q Consensus 916 ~ltv~e~l~~~~~-lr~--~~~-~~~~~~~~~v~~~l~~l~l~-~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~il 990 (1136)
.+|+.+++.+... ++. ... .......+.++++++.+++. +..+..+ ...||||||||++|||||+.+|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~LS~G~~qrv~laral~~~p~il 167 (248)
T PRK09580 92 GVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NVGFSGGEKKRNDILQMAVLEPELC 167 (248)
T ss_pred chhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 8887766543211 110 000 11122345677888888884 3333322 1269999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHh-cCEEEEEecCcEEEEeCCC
Q 001154 991 FMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFES-FDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 991 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~-~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|||||+|||+.++..+.+.|+++++.|+|||++||+++. +... +|++++|+ +|++++.|+.
T Consensus 168 lLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i~~l~-~g~i~~~g~~ 230 (248)
T PRK09580 168 ILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYVHVLY-QGRIVKSGDF 230 (248)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEEEEEE-CCeEEEeCCH
Confidence 9999999999999999999999998778999999999763 4444 79999997 5789998874
No 443
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.7e-34 Score=363.39 Aligned_cols=206 Identities=23% Similarity=0.338 Sum_probs=164.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1136)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|.+||.++.+.. .++.++||+|++.+|. .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 35999999999999999999999999999999999999886 999999999987654 3578999999998775 5
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
|++|||.++.. ....+.+.++++. .+ .++.++ .|+...||.+|+. .
T Consensus 568 Ti~eNi~l~~~----~~~~~~i~~al~~---~~------------------------l~~~i~--~lp~gl~t~i~e~-G 613 (710)
T TIGR03796 568 TVRDNLTLWDP----TIPDADLVRACKD---AA------------------------IHDVIT--SRPGGYDAELAEG-G 613 (710)
T ss_pred cHHHHhhCCCC----CCCHHHHHHHHHH---hC------------------------CHHHHH--hCcCcccceeccC-C
Confidence 99999987421 1111111111100 00 111121 3667789999975 4
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
.+||||||||++||||++.+|++|+||||||+||+.++.+|.+.|++ .++|+|+ ++|..+ ....+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl~-~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRLS-TIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCHH-HHHhCCEEEEEeCC
Confidence 68999999999999999999999999999999999999999999985 2455555 556554 45669999999999
Q ss_pred eEEEecChhhHHH
Q 001154 385 QIVYQGPRVSVLD 397 (1136)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1136)
+++..|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999864
No 444
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.1e-32 Score=348.65 Aligned_cols=209 Identities=29% Similarity=0.395 Sum_probs=173.3
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.++|++|.++. .++.+|+|+|++|+|||++||+|+||||||||+++|+|... +.+|+|.+||.++
T Consensus 477 ~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 543 (710)
T TIGR03796 477 YVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIPR 543 (710)
T ss_pred eEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEeH
Confidence 5788888887632 23569999999999999999999999999999999999877 5689999999886
Q ss_pred Ch---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------cccccCCC
Q 001154 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLPG 965 (1136)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~~~~~ 965 (1136)
++ ..+++.+|||+|++.++. .|++||+.++. + +.+ ++.++++++..++.+.. |+.++..
T Consensus 544 ~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~- 612 (710)
T TIGR03796 544 EEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG- 612 (710)
T ss_pred HHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC-
Confidence 43 457889999999999886 59999997641 1 122 23456777777765432 3445443
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
+.+||||||||++|||||+++|+||+||||||+||+.+.+.+++.|++ .++|+|++||+++ ....+|++++|+ +
T Consensus 613 G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~-~ 686 (710)
T TIGR03796 613 GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLE-R 686 (710)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEe-C
Confidence 357999999999999999999999999999999999999999999986 4899999999975 567799999998 5
Q ss_pred cEEEEeCCC
Q 001154 1046 GELIYAGPL 1054 (1136)
Q Consensus 1046 G~~~~~g~~ 1054 (1136)
|+++..|+.
T Consensus 687 G~i~~~G~~ 695 (710)
T TIGR03796 687 GKVVQRGTH 695 (710)
T ss_pred CEEEEecCH
Confidence 899999984
No 445
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=313.28 Aligned_cols=212 Identities=20% Similarity=0.261 Sum_probs=169.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC--CCcceeeEEEECCccCCCC-----CCCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1136)
..+|+|+|+.|++|++++|+|||||||||||++|+|.++ |..+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999875 3212489999999887432 124679999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++.+||+||+.+..+..+.... . ....+++++++.+||........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~-------------------~--------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVNR-------------------S--------------EADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCCH-------------------H--------------HHHHHHHHHHHHcCCchhhhHHh-
Confidence 9999999999875432110000 0 00123677888888854211111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+..+..||||||||++||+||+.+|++++|||||+|||+.++.++.+.|+++++ + ++|+.++|..+++.++||++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 123457999999999999999999999999999999999999999999999864 3 5667788899999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 001154 381 LSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1136)
|++|+++..|+.+++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999987763
No 446
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-34 Score=312.35 Aligned_cols=212 Identities=19% Similarity=0.272 Sum_probs=169.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1136)
+.+|+|+|+++++|++++|+||||||||||+++|+|.+++..+.+|+|+++|+++.+.. .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 36999999999999999999999999999999999987532245999999999876432 2457999999988777 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
||+||+.++...++.... . .....+++.+++.+||........ +...
T Consensus 94 tv~eni~~~~~~~~~~~~-------------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN-------------------K-------------DEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC-------------------h-------------HHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999886433211000 0 001223677888999853211111 2344
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+.+++.+++|++++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH---NLSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecCHHHHHhhCcEEEEEECC
Confidence 67999999999999999999999999999999999999999999998753 456677889999999999999999999
Q ss_pred eEEEecChhhHH
Q 001154 385 QIVYQGPRVSVL 396 (1136)
Q Consensus 385 ~iv~~G~~~~~~ 396 (1136)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999987763
No 447
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-35 Score=304.25 Aligned_cols=195 Identities=27% Similarity=0.420 Sum_probs=170.7
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-------CCCceEEEEeccCCCCCCCC
Q 001154 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1136)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+. ..+|.+|||+|+..+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577777776899999999999999999999999987 99999999865332 12589999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+-||.|+.... .....|++...||+.|..+.+. .
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~P-----~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRYP-----G 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhCC-----C
Confidence 999999974321 0112678899999999887654 5
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.|||||||||+|||||++.|++|+||||.+.||-....+|+-+|.++.++.+ .-|+.++|...|+..++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~-IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEIN-IPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcC-CCEEEEecCHHHHHhhhheEEEecCCe
Confidence 6999999999999999999999999999999999999999999999988764 556668999999999999999999999
Q ss_pred EEEecChhhHH
Q 001154 386 IVYQGPRVSVL 396 (1136)
Q Consensus 386 iv~~G~~~~~~ 396 (1136)
+...|+.+++.
T Consensus 207 V~A~g~~e~v~ 217 (352)
T COG4148 207 VKASGPLEEVW 217 (352)
T ss_pred EEecCcHHHHh
Confidence 99999998885
No 448
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-34 Score=314.50 Aligned_cols=208 Identities=25% Similarity=0.317 Sum_probs=166.2
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCC--C-ceeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
+++.+|+|+||+|.+||+++|+||||||||||+++|+|... + .+.+|+|.++|.++.. ...++.++|++|++
T Consensus 14 ~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~ 93 (250)
T PRK14266 14 DDAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVELRKKVGMVFQKP 93 (250)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHHhhheEEEecCC
Confidence 34679999999999999999999999999999999999743 1 1258999999987632 23456799999999
Q ss_pred CCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 912 IHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
.+++. |++||+.+....... .......+.+.++++.+++.+....... ..+..||+|||||++|||||+.+|+||+
T Consensus 94 ~~~~~-t~~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS~Gq~qrv~laral~~~p~lll 169 (250)
T PRK14266 94 NPFPK-SIFDNVAYGLRIHGE--DDEDFIEERVEESLKAAALWDEVKDKLD-KSALGLSGGQQQRLCIARTIAVSPEVIL 169 (250)
T ss_pred ccCcc-hHHHHHHhHHhhcCC--CCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 88875 999999875432211 1122334567788888887532111111 1245799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+.+.|++++ +++|||++||++. ++...+|++++|. +|++++.|+.
T Consensus 170 lDEP~~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~-~~~~~~~~i~~l~-~G~i~~~g~~ 229 (250)
T PRK14266 170 MDEPCSALDPISTTKIEDLIHKLK-EDYTIVIVTHNMQ-QATRVSKYTSFFL-NGEIIESGLT 229 (250)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEECCHH-HHHhhcCEEEEEE-CCeEEEeCCH
Confidence 999999999999999999999985 4899999999986 5778899999997 4799998874
No 449
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.7e-34 Score=305.00 Aligned_cols=185 Identities=25% Similarity=0.305 Sum_probs=154.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1136)
+++.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++.+
T Consensus 11 ~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (198)
T TIGR01189 11 GERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPEL 88 (198)
T ss_pred CCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCC
Confidence 45679999999999999999999999999999999999876 468999999987532 23456789999998888889
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|+.||+.+....+.. + .+.++++++.+++.+..+..+ ..||+|||||++|||||+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~-----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~ 156 (198)
T TIGR01189 89 SALENLHFWAAIHGG-----A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTT 156 (198)
T ss_pred cHHHHHHHHHHHcCC-----c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 999999875433211 1 235678899999987666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEE
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLF 1041 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~ 1041 (1136)
|||+.++..+++.|++++++|.|||++||++. ++ .+++++.
T Consensus 157 ~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~--~~~~~~~ 197 (198)
T TIGR01189 157 ALDKAGVALLAGLLRAHLARGGIVLLTTHQDL-GL--VEARELR 197 (198)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc-cc--cceEEee
Confidence 99999999999999998778999999999975 22 3455543
No 450
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-34 Score=315.64 Aligned_cols=212 Identities=21% Similarity=0.296 Sum_probs=167.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCC-----CCCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1136)
..+|+|+|+.|+||++++|+|||||||||||++|+|.+++. .+.+|+|+++|.++... ..++.++|++|++..
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 35999999999999999999999999999999999998641 12489999999887531 124579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++. ||.||+.|+....+.... . ......++.+++.+||.+......
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~~------------------~--------------~~~~~~~~~~l~~~~l~~~~~~~~- 157 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLARS------------------K--------------AELDEIVETSLRKAGLWEEVKDRL- 157 (267)
T ss_pred CCC-cHHHHHHHHHHhcccccc------------------h--------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 774 999999886433211000 0 000123677888999864211111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+...+.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++..++|++++
T Consensus 158 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v~~ 234 (267)
T PRK14235 158 HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRTAF 234 (267)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEEEE
Confidence 123457999999999999999999999999999999999999999999998854 3 4666688889999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 001154 381 LSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1136)
|++|+++..|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 235 FHLGNLVEVGDTEKMF 250 (267)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999887663
No 451
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=314.45 Aligned_cols=210 Identities=20% Similarity=0.310 Sum_probs=166.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCC--CcceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|.+.+ ..+.+|+|+++|.++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 599999999999999999999999999999999999863 222489999999987421 1235799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+. ||+||+.|.....+.... .+...+++.+++.+||.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 999999876432211000 000123567788888853211111 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
...+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+.+++.+++|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--K-YTIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEEcCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999998853 3 55666788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999988763
No 452
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=311.43 Aligned_cols=205 Identities=20% Similarity=0.284 Sum_probs=167.5
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcH
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
..+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|. +++++|...+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 45689999999999999999999999999999999999876 46899999985 3567777777778999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
.||+.+...... .......+.++++++.+++.+..+... ..||+|||||++||+||+.+|+||||||||+||
T Consensus 103 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCMG---FKRKEIKAMTPKIIEFSELGEFIYQPV-----KKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCCc-----ccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 999987543321 223334455677888888877665533 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCchhHHHHHHH
Q 001154 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFE 1066 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~~~ 1066 (1136)
|+.++..+++.|+++.+.|+|||++||++. .+.+.+|++++|+ +|+++..|+......+...||.
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~~~~~~~~~~~~ 239 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIE-GGKLKDYGELDDVLPKYEAFLN 239 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEE-CCEEEEeCCHHHHHHHhHHHHH
Confidence 999999999999998777999999999976 4667899999997 5799988876433333333443
No 453
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=312.95 Aligned_cols=211 Identities=20% Similarity=0.263 Sum_probs=167.3
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC--CCcceeeEEEECCccCCCCC-----CCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1136)
+++|+|+|+++++|++++|+|||||||||||++|+|... +..+.+|+|.++|.++.... .++.++|++|++.+
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 359999999999999999999999999999999999732 21124899999999875421 23579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++ .||.||+.++.+..+.... + .....++++++.+||.+...+..
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~~--------------------~-------------~~~~~~~~~l~~~~l~~~~~~~~- 140 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKDN--------------------A-------------FIRQRVEETLKGAALWDEVKDKL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH--------------------H-------------HHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 6999999876432211000 0 01123677888899865322222
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+...+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|++++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~v~~ 217 (250)
T PRK14245 141 KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--D-YTIVIVTHNMQQAARVSDKTAF 217 (250)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHhhCCEEEE
Confidence 133457999999999999999999999999999999999999999999999843 3 5666688999999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 001154 381 LSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1136)
|++|++++.|+.+++.
T Consensus 218 l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 218 FYMGEMVEYDDTKKIF 233 (250)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999988774
No 454
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=8.7e-34 Score=319.63 Aligned_cols=250 Identities=24% Similarity=0.330 Sum_probs=203.2
Q ss_pred cccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEE
Q 001154 831 ELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGY 906 (1136)
Q Consensus 831 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gy 906 (1136)
++++.++.++...+++|||++|++||+.||+|.|||||||||++|.|... +.+|+|+++|++..- ...+..||+
T Consensus 6 ~~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~--P~~GeI~v~G~~v~~~sP~dA~~~GIGM 83 (501)
T COG3845 6 EMRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQ--PDSGEIRVDGKEVRIKSPRDAIRLGIGM 83 (501)
T ss_pred EEeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCccc--CCcceEEECCEEeccCCHHHHHHcCCcE
Confidence 34455566778899999999999999999999999999999999999877 579999999997532 345567999
Q ss_pred eccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 001154 907 CEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVAN 986 (1136)
Q Consensus 907 v~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~ 986 (1136)
|.|+..+.+++||.||+..+..-......+.....+.++++.+..||.--.+..++ .||.||||||.|-++|.++
T Consensus 84 VhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~-----dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 84 VHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVA-----DLSVGEQQRVEILKALYRG 158 (501)
T ss_pred EeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceee-----cCCcchhHHHHHHHHHhcC
Confidence 99999999999999999987532222234556677889999999999877777664 7999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCC-CCC-chhHHHHH
Q 001154 987 PSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGP-LGS-KSCELIKY 1064 (1136)
Q Consensus 987 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~-~~~-~~~~~~~~ 1064 (1136)
|++|||||||+-|-|.....+++++++++++|+|||+|||... ++.+.+||+-||.+ |+++-.-+ ..+ ...++.+-
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~-Ev~~iaDrvTVLR~-Gkvvgt~~~~~~~t~~ela~l 236 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLK-EVMAIADRVTVLRR-GKVVGTVDPVAETTEEELAEL 236 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhhCeeEEEeC-CeEEeeecCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999987 79999999999975 77765444 323 33445554
Q ss_pred HHhcC-CCCCCCCCCCccceeeeecC
Q 001154 1065 FEAVE-GVPKIRPGYNPAAWMLEVTS 1089 (1136)
Q Consensus 1065 ~~~~~-g~~~~~~~~npa~~~l~~~~ 1089 (1136)
.-.-. ..+.......|.+++|+|.+
T Consensus 237 MvG~~v~~~~~~~~~~pg~~vL~V~~ 262 (501)
T COG3845 237 MVGREVVLRVVKPPSTPGEVVLEVED 262 (501)
T ss_pred hcCCccccccccCCCCCCCeEEEEee
Confidence 43210 11112355678899999865
No 455
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-34 Score=326.60 Aligned_cols=202 Identities=27% Similarity=0.406 Sum_probs=165.4
Q ss_pred ceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCC
Q 001154 147 KLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAE 223 (1136)
Q Consensus 147 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 223 (1136)
+.++|+|+|+++++||.++|+|++|||||||++.|+|-+++. +|+|++||.++..... +..++.++|... +..
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~h-lF~ 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVH-LFS 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchH-HHH
Confidence 346999999999999999999999999999999999999887 9999999998876654 467899999885 445
Q ss_pred CCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCC-------ccccc
Q 001154 224 MTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL-------DTCAD 296 (1136)
Q Consensus 224 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL-------~~~~d 296 (1136)
.|+|+||.++... . .|+ .+-++++..|| ++..|
T Consensus 426 ~Tlr~NL~lA~~~----A------------------sDE------------------el~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 426 GTLRDNLRLANPD----A------------------SDE------------------ELWAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred HHHHHHHhhcCCC----C------------------CHH------------------HHHHHHHHcCHHHHHHhChhhhh
Confidence 6999999875321 0 001 12333444444 34678
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 001154 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1136)
Q Consensus 297 t~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1136)
|.+|+ ..+.||||||||++|||+|+.++++++|||||.|||+.|..++++.+.+.++ +++++.++|+...+ +.||
T Consensus 466 t~lge-~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~---~kTll~vTHrL~~l-e~~d 540 (573)
T COG4987 466 TWLGE-GGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE---GKTLLMVTHRLRGL-ERMD 540 (573)
T ss_pred chhcc-CCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc---CCeEEEEecccccH-hhcC
Confidence 89986 5668999999999999999999999999999999999999999999987653 44555567776554 6789
Q ss_pred eEEEEcCCeEEEecChhhHHH
Q 001154 377 DVILLSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~~ 397 (1136)
+|++|++|+++.+|.+.+++.
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999998864
No 456
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=312.25 Aligned_cols=207 Identities=20% Similarity=0.313 Sum_probs=167.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCCC-----CCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1136)
+.+|+|+|++|++|++++|+|||||||||||++|+|..++. .+.+|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35999999999999999999999999999999999987642 125899999999875321 24569999999987
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc----ccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT----CAD 296 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~d 296 (1136)
++ +||+||+.|.....+.... .....+++.+++.+||.. ..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHhh
Confidence 77 8999999886433211000 000123567788888742 233
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 001154 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1136)
Q Consensus 297 t~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1136)
. ..+.||||||||++||+|++.+|++++|||||+|||+.++.++.+.|+++.+ + ++|+.++|+..++.+++|
T Consensus 143 ~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d 214 (251)
T PRK14270 143 K-----SALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSD 214 (251)
T ss_pred C-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcC
Confidence 3 3457999999999999999999999999999999999999999999998864 3 456667788889999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 001154 377 DVILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~ 396 (1136)
++++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999988764
No 457
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.9e-34 Score=350.10 Aligned_cols=200 Identities=28% Similarity=0.445 Sum_probs=165.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1136)
++|+|+|++++||+.++|+||||||||||+++|+|.++|. +|+|++||.++.+... ++.++||+|++.+|+ .|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-AT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-cc
Confidence 5999999999999999999999999999999999999886 9999999999877643 467999999998776 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCC------cccccccc
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGL------DTCADTLV 299 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL------~~~~dt~v 299 (1136)
++|||.++.. ... +..+.++++..|+ ++..||.|
T Consensus 430 i~~Ni~~~~~----~~~------------------------------------~~~i~~al~~~~l~~~i~~p~GldT~v 469 (574)
T PRK11160 430 LRDNLLLAAP----NAS------------------------------------DEALIEVLQQVGLEKLLEDDKGLNAWL 469 (574)
T ss_pred HHHHhhcCCC----ccC------------------------------------HHHHHHHHHHcCCHHHHcCccccCchh
Confidence 9999988531 000 0112333333343 56689999
Q ss_pred cCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 300 GDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 300 g~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
|+. .+.||||||||++||||++.+|++|+||||||+||+.++..|.+.|++..+ ++|+|+ ++|..+.+ ..+|+|+
T Consensus 470 ge~-g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~--~~tvii-itHr~~~~-~~~d~i~ 544 (574)
T PRK11160 470 GEG-GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQ--NKTVLM-ITHRLTGL-EQFDRIC 544 (574)
T ss_pred cCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEE-EecChhHH-HhCCEEE
Confidence 975 557999999999999999999999999999999999999999999998753 455555 55555444 5699999
Q ss_pred EEcCCeEEEecChhhHHH
Q 001154 380 LLSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~~~ 397 (1136)
+|++|+++..|+.+++++
T Consensus 545 ~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 545 VMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEeCCeEEEeCCHHHHHh
Confidence 999999999999988864
No 458
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=8.5e-34 Score=357.01 Aligned_cols=206 Identities=24% Similarity=0.374 Sum_probs=161.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1136)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|. +|+|.+||.++.+... ++.++||+|++.+|. .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46999999999999999999999999999999999999886 9999999999876643 568999999998765 6
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
|++|||.++... ...+.+.+++ +... .++.++ .|++..||.+|+. .
T Consensus 570 TIreNI~~g~~~----~~~e~i~~al------------------~~a~---------l~~~i~--~lp~GldT~ige~-G 615 (711)
T TIGR00958 570 SVRENIAYGLTD----TPDEEIMAAA------------------KAAN---------AHDFIM--EFPNGYDTEVGEK-G 615 (711)
T ss_pred CHHHHHhcCCCC----CCHHHHHHHH------------------HHcC---------CHHHHH--hCCCccCCcccCC-C
Confidence 999999885321 0001111111 0000 111122 2566789999975 4
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
.+||||||||++||||++.+|+||+||||||+||+.+...|.+ ... . .+.|++.++|..+ ....+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~-~~~TvIiItHrl~-~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---R-ASRTVLLIAHRLS-TVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---c-CCCeEEEEeccHH-HHHhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999988 221 2 2345555666654 45779999999999
Q ss_pred eEEEecChhhHHH
Q 001154 385 QIVYQGPRVSVLD 397 (1136)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1136)
+++..|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999998864
No 459
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=7.6e-34 Score=358.13 Aligned_cols=208 Identities=25% Similarity=0.397 Sum_probs=166.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 224 (1136)
.++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|.+||.++.+... ++.++||+|++.+|. .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35999999999999999999999999999999999999886 9999999999877643 578999999998776 5
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEML 304 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~ 304 (1136)
|++|||.++.. ....+.+.+++ +... .++.++ .|++..||.+|+. .
T Consensus 554 TI~eNi~~~~~----~~~~~~i~~a~------------------~~~~---------l~~~i~--~lp~gl~T~i~e~-G 599 (694)
T TIGR03375 554 TLRDNIALGAP----YADDEEILRAA------------------ELAG---------VTEFVR--RHPDGLDMQIGER-G 599 (694)
T ss_pred hHHHHHhCCCC----CCCHHHHHHHH------------------HHcC---------hHHHHH--hCcccccceecCC-C
Confidence 99999987521 00011111111 0000 112222 3677889999975 4
Q ss_pred CCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001154 305 KGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEG 384 (1136)
Q Consensus 305 ~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G 384 (1136)
.+||||||||++||||++.+|++++||||||+||+.+...|.+.|+++.+ ++|+|+ ++|..+ ....||+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~ii-ItHrl~-~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTLVL-VTHRTS-LLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEEEE-EecCHH-HHHhCCEEEEEeCC
Confidence 67999999999999999999999999999999999999999999998753 445555 555554 55789999999999
Q ss_pred eEEEecChhhHHH
Q 001154 385 QIVYQGPRVSVLD 397 (1136)
Q Consensus 385 ~iv~~G~~~~~~~ 397 (1136)
++++.|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999998865
No 460
>KOG0059 consensus Lipid exporter ABCA1 and related proteins, ABC superfamily [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1e-32 Score=351.50 Aligned_cols=199 Identities=28% Similarity=0.423 Sum_probs=179.4
Q ss_pred EEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCCCCCCCCcH
Q 001154 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQNDIHSPGLTV 919 (1136)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~~ltv 919 (1136)
+++++|+.|++||+.|+.|+|||||||++++|+|..+ +.+|+++++|+++.. ...++.+|||||+|.+.+.+|.
T Consensus 580 Av~~ls~~V~~gecfgLLG~NGAGKtT~f~mltG~~~--~t~G~a~i~g~~i~~~~~~~~~~~~iGyCPQ~d~l~~~lT~ 657 (885)
T KOG0059|consen 580 AVRGLSFAVPPGECFGLLGVNGAGKTTTFKMLTGETK--PTSGEALIKGHDITVSTDFQQVRKQLGYCPQFDALWEELTG 657 (885)
T ss_pred hhcceEEEecCCceEEEecCCCCCchhhHHHHhCCcc--CCcceEEEecCccccccchhhhhhhcccCCchhhhhhhccH
Confidence 8999999999999999999999999999999999877 568999999988643 2357789999999999999999
Q ss_pred HHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 001154 920 LESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGL 999 (1136)
Q Consensus 920 ~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgL 999 (1136)
+|++.+.+++|. .+..+.++.++++++.++|.+.+++.++ .+|||+||||++|.||+.+|++++|||||+|+
T Consensus 658 rEhL~~~arlrG---~~~~di~~~v~~ll~~~~L~~~~~~~~~-----~ySgG~kRkLs~aialig~p~vi~LDEPstGm 729 (885)
T KOG0059|consen 658 REHLEFYARLRG---LPRSDIGSAIEKLLRLVGLGPYANKQVR-----TYSGGNKRRLSFAIALIGDPSVILLDEPSTGL 729 (885)
T ss_pred HHHHHHHHHHcC---CChhHHHHHHHHHHHHcCChhhhccchh-----hCCCcchhhHHHHHHHhcCCCEEEecCCCCCC
Confidence 999999999885 3344556679999999999999998754 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 1000 DARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 1000 D~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||.+++.++++++++++.|+.||.|||.++ +....|||+.+|.+ |++...|+.
T Consensus 730 DP~arr~lW~ii~~~~k~g~aiiLTSHsMe-E~EaLCtR~aImv~-G~l~ciGs~ 782 (885)
T KOG0059|consen 730 DPKARRHLWDIIARLRKNGKAIILTSHSME-EAEALCTRTAIMVI-GQLRCIGSP 782 (885)
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHHhhhhheeec-CeeEEecCh
Confidence 999999999999999887889999999875 56667999999985 799998986
No 461
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-34 Score=314.53 Aligned_cols=207 Identities=24% Similarity=0.319 Sum_probs=167.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCc--ceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
++|+|+|++|++|++++|+|||||||||||++|+|.+.+.. +.+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 59999999999999999999999999999999999986421 2499999999876421 1245799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc----cccc
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT----CADT 297 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~----~~dt 297 (1136)
+.+||+||+.++....+.... ......++.+++.+||.. ..++
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRLDK 144 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHhhC
Confidence 999999999876432210000 001123677788888842 2333
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCe
Q 001154 298 LVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDD 377 (1136)
Q Consensus 298 ~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~ 377 (1136)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++.+++|+
T Consensus 145 -----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~ 216 (258)
T PRK14241 145 -----PGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQ 216 (258)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCE
Confidence 3457999999999999999999999999999999999999999999998853 3 5666688999999999999
Q ss_pred EEEEc------CCeEEEecChhhHH
Q 001154 378 VILLS------EGQIVYQGPRVSVL 396 (1136)
Q Consensus 378 vilL~------~G~iv~~G~~~~~~ 396 (1136)
|++|+ +|++++.|+.+++.
T Consensus 217 i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 217 TAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEecccCCCCceEEecCCHHHHH
Confidence 99997 79999999987763
No 462
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=320.62 Aligned_cols=210 Identities=24% Similarity=0.316 Sum_probs=164.6
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCC---ceeEEEEEEcCccCCh-----hcccceEEEeccCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GIIEGDIYISGYPKRQ-----ETFARISGYCEQND 911 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~ 911 (1136)
++..+|+++||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++.. ...++.++|++|++
T Consensus 56 ~~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~~~~~~~i~~v~q~~ 135 (305)
T PRK14264 56 GDDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNLVELRKRVGMVFQSP 135 (305)
T ss_pred CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccHHHHhhceEEEccCC
Confidence 345799999999999999999999999999999999997542 2468999999987532 23456799999998
Q ss_pred CCCCCCcHHHHHHHHhhhcCCC---------ccc-HHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHH
Q 001154 912 IHSPGLTVLESLLFSAWLRLPS---------EIE-LETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAV 981 (1136)
Q Consensus 912 ~~~~~ltv~e~l~~~~~lr~~~---------~~~-~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~ 981 (1136)
.+++ .|++||+.+....+... ... ....++.++++++.+++.+....... ..+..||||||||++||+
T Consensus 136 ~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LSgGq~qrv~LAr 213 (305)
T PRK14264 136 NPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLD-DNALGLSGGQQQRLCIAR 213 (305)
T ss_pred cccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhc-CccccCCHHHHHHHHHHH
Confidence 8877 59999998764321100 011 12234567888888887431111111 123589999999999999
Q ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEE-EEecCcEEEEeCCC
Q 001154 982 ELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL-FMKRGGELIYAGPL 1054 (1136)
Q Consensus 982 aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~-~l~~gG~~~~~g~~ 1054 (1136)
||+.+|+||||||||+|||+.++..+++.|+++++ +.|||++||+++ .+.+.+|+++ +|+ +|++++.|+.
T Consensus 214 aL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 214 CLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISDQTAVFLT-GGELVEYDDT 284 (305)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcCEEEEEec-CCEEEEeCCH
Confidence 99999999999999999999999999999999876 589999999986 4677899975 566 5899999875
No 463
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=311.53 Aligned_cols=210 Identities=20% Similarity=0.263 Sum_probs=163.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC--CCcceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
.+|+|+|+++++|++++|+|||||||||||++|+|.+. +..+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 114 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNPF 114 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCccC
Confidence 59999999999999999999999999999999999764 2113489999999887532 1245799999999878
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+. ||+||+.+.....+... .. .....+..+++.+|+........ +
T Consensus 115 ~~-tv~enl~~~~~~~~~~~--~~-------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 159 (268)
T PRK14248 115 PK-SIYNNITHALKYAGERR--KS-------------------------------VLDEIVEESLTKAALWDEVKDRL-H 159 (268)
T ss_pred cc-cHHHHHHHHHHhcCCCc--HH-------------------------------HHHHHHHHHHHHcCCCcchHHHH-h
Confidence 75 99999987533211000 00 00122556677777742110111 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|+|++|
T Consensus 160 ~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v~~l 236 (268)
T PRK14248 160 SSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRTAFF 236 (268)
T ss_pred cCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999999853 3 56667888888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 237 ~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 237 LNGDLVEYDQTEQIF 251 (268)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 464
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.6e-32 Score=346.07 Aligned_cols=211 Identities=28% Similarity=0.471 Sum_probs=175.0
Q ss_pred eeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccC
Q 001154 816 SMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPK 895 (1136)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 895 (1136)
.+.++|++|.++. .++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 463 ~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~l 529 (694)
T TIGR03375 463 EIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVDI 529 (694)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEh
Confidence 5788888887631 23569999999999999999999999999999999999877 5689999999986
Q ss_pred Ch---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------ccccccCCC
Q 001154 896 RQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLPG 965 (1136)
Q Consensus 896 ~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~~ 965 (1136)
.+ ..+++.+|||+|++.++.. |++||+.++. + +.+ ++.++++++..++.+. .|+.++..
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~~-TI~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~- 598 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFYG-TLRDNIALGA----P-YAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGER- 598 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhhh-hHHHHHhCCC----C-CCC----HHHHHHHHHHcChHHHHHhCcccccceecCC-
Confidence 53 4678899999999998865 9999998642 1 122 2345667777766543 24445443
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecC
Q 001154 966 INGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRG 1045 (1136)
Q Consensus 966 ~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~g 1045 (1136)
...||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++. +++|+|++||+++ ..+.+|++++|+ +
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~-~ 674 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMD-N 674 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEe-C
Confidence 35799999999999999999999999999999999999999999999875 5899999999975 567899999998 5
Q ss_pred cEEEEeCCC
Q 001154 1046 GELIYAGPL 1054 (1136)
Q Consensus 1046 G~~~~~g~~ 1054 (1136)
|+++..|+.
T Consensus 675 G~i~e~G~~ 683 (694)
T TIGR03375 675 GRIVADGPK 683 (694)
T ss_pred CEEEeeCCH
Confidence 899999974
No 465
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=329.20 Aligned_cols=203 Identities=19% Similarity=0.289 Sum_probs=164.4
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCCCcHHH
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPGLTVLE 921 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~ltv~e 921 (1136)
+.+|+|+||+|++|+++||+||||||||||+++|+|..+ +.+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~--P~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTM--PNKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 469999999999999999999999999999999999876 4689999999641 1222344567789999
Q ss_pred HHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 001154 922 SLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDA 1001 (1136)
Q Consensus 922 ~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~ 1001 (1136)
++.+...... ....+..+.++++++.+++.+..+..+ ..||||||||++|||||+.+|++|||||||+|||+
T Consensus 105 nL~l~~~~~~---~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMMG---LTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhcC---CCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 9987543321 223334456778999999987766543 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCCCchhHHHHHHH
Q 001154 1002 RAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGSKSCELIKYFE 1066 (1136)
Q Consensus 1002 ~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~~~~~~~~~~~~ 1066 (1136)
.++..+++.|++++++|+|||++||+++ .+.+.||++++|. +|++++.|+..+...+...|++
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~-~GkIv~~G~~~el~~~~~~~~~ 239 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLH-YGQVKEYGDIKEVVDHYDEFLK 239 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCHHHHHhhHHHHHH
Confidence 9999999999998777999999999976 4677899999998 4799999876433223334444
No 466
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.4e-34 Score=319.50 Aligned_cols=196 Identities=21% Similarity=0.295 Sum_probs=162.1
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCc
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
..+|+||||+|++||++||+|+||||||||+++|+|... .+|+|+++|.++.. ..+++.++||+|++.+++. |
T Consensus 17 ~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~~-t 92 (275)
T cd03289 17 NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFSG-T 92 (275)
T ss_pred CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEhhhCCHHHHhhhEEEECCCcccchh-h
Confidence 468999999999999999999999999999999999875 36999999987642 3456789999999998875 9
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccC------CCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGL------PGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~------~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
++||+..... .. .+.++++++.++|.+..+...+. .+...||+|||||++|||||+.+|+||+|
T Consensus 93 v~~nl~~~~~------~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~illl 162 (275)
T cd03289 93 FRKNLDPYGK------WS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLL 162 (275)
T ss_pred HHHHhhhccC------CC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999963211 11 13467788888887655543321 12346999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
||||++||+.+...+++.|+++. .++|||+++|+++ ....+|++++|+ .|++++.|++.
T Consensus 163 DEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~-~G~i~~~g~~~ 221 (275)
T cd03289 163 DEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIE-ENKVRQYDSIQ 221 (275)
T ss_pred ECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEec-CCeEeecCCHH
Confidence 99999999999999999999874 5899999999975 345699999997 47999999864
No 467
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=314.35 Aligned_cols=204 Identities=26% Similarity=0.287 Sum_probs=164.3
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCc---eeEEEEEEcCccCC-------hhcccceEEEecc
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---IIEGDIYISGYPKR-------QETFARISGYCEQ 909 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~~~-------~~~~~~~~gyv~Q 909 (1136)
+++.+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.+.. ...+++.+||++|
T Consensus 27 ~~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q 106 (265)
T PRK14252 27 GGYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEVDPIEVRMRISMVFQ 106 (265)
T ss_pred CCeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccccccCHHHHhccEEEEcc
Confidence 3457999999999999999999999999999999999976521 26899999987542 1234667999999
Q ss_pred CCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCc----cccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 001154 910 NDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTS----LSGALIGLPGINGLSTEQRKRLTIAVELVA 985 (1136)
Q Consensus 910 ~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~----~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~ 985 (1136)
++.+++. |++||+.+....... . .....++.++++++.+++.+ ..+.. +..||+|||||++|||||+.
T Consensus 107 ~~~~~~~-tv~eni~~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~ 178 (265)
T PRK14252 107 KPNPFPK-SIFENVAYGLRIRGV-K-RRSILEERVENALRNAALWDEVKDRLGDL-----AFNLSGGQQQRLCIARALAT 178 (265)
T ss_pred CCcCCcc-hHHHHHHhHHHHcCC-C-hHHHHHHHHHHHHHHcCCchhhhHHHhCC-----cccCCHHHHHHHHHHHHHHc
Confidence 9988876 999999876432211 0 11222345677888887742 22222 35799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 986 NPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 986 ~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+ +|+++..|+.
T Consensus 179 ~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 244 (265)
T PRK14252 179 DPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAYMY-MGELIEFGAT 244 (265)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999999999865 799999999976 4667899999997 5799988874
No 468
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.2e-34 Score=354.97 Aligned_cols=211 Identities=27% Similarity=0.420 Sum_probs=174.6
Q ss_pred ceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCcc
Q 001154 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1136)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1136)
..+.|+|++|.++. ++++|+|+||+++|||++||+||||||||||+++|+|... +.+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEe
Confidence 45888888887631 5689999999999999999999999999999999999876 468999999988
Q ss_pred CCh---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCC-------ccccccccCC
Q 001154 895 KRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELT-------SLSGALIGLP 964 (1136)
Q Consensus 895 ~~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~-------~~~~~~~~~~ 964 (1136)
+++ ..+++.++||+|++.++. -|++||+.++.. +.+. +.++++++..++. +-.|+.+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~-----~at~----eei~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRP-----DATD----EEIEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccceecCC
Confidence 653 567889999999999987 799999988631 1222 2344444444332 2356667643
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 001154 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1136)
Q Consensus 965 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~ 1044 (1136)
+..||||||||++||||++++|+||+||||||+||+.+...|++.++++. +++|+|+++|+++ ....+|+|+||++
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999876 6789999999975 4566999999985
Q ss_pred CcEEEEeCCC
Q 001154 1045 GGELIYAGPL 1054 (1136)
Q Consensus 1045 gG~~~~~g~~ 1054 (1136)
|+++..|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 789999985
No 469
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=311.81 Aligned_cols=210 Identities=22% Similarity=0.323 Sum_probs=166.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC--CCcceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
.+|+|+|++|++|++++|+|||||||||||++|+|... |....+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 59999999999999999999999999999999999853 3222489999999877431 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+ +||+||+.+.....+... + ......++.+++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKD--K-------------------------------QVLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCc--H-------------------------------HHHHHHHHHHHHHcCCchhHHHHH-h
Confidence 7 899999988643221100 0 000123566778888743211111 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
.....|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999998853 3 56667888889999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 470
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.9e-34 Score=304.48 Aligned_cols=184 Identities=22% Similarity=0.287 Sum_probs=155.2
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh--hcccceEEEeccCCCCCCCC
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ--ETFARISGYCEQNDIHSPGL 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~l 917 (1136)
++..+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|+++|.++.. ..+++.++|++|+..+++..
T Consensus 12 ~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 89 (200)
T PRK13540 12 HDQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIKKDLCTYQKQLCFVGHRSGINPYL 89 (200)
T ss_pred CCeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccccCHHHHHhheEEeccccccCcCC
Confidence 44679999999999999999999999999999999999876 468999999987642 34567899999998888899
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
||+||+.+.... .. . ...++++++.+++.+..+... ..||+|||||++|||||+.+|++|+|||||+
T Consensus 90 tv~~~~~~~~~~--~~----~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~~lilDEP~~ 156 (200)
T PRK13540 90 TLRENCLYDIHF--SP----G--AVGITELCRLFSLEHLIDYPC-----GLLSSGQKRQVALLRLWMSKAKLWLLDEPLV 156 (200)
T ss_pred CHHHHHHHHHhc--Cc----c--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 999999876421 11 1 235788999998876555433 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEE
Q 001154 998 GLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL 1040 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~ 1040 (1136)
|||+.++..+.+.|++++++|+|||++||++. ....+|...
T Consensus 157 ~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 157 ALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred ccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 99999999999999998777999999999975 345567543
No 471
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=314.41 Aligned_cols=209 Identities=20% Similarity=0.285 Sum_probs=164.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCc--ceeeEEEECCccCCCC-----CCCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1136)
..+|+|+|++|++|++++|+|||||||||||++|+|.+++.. +.+|+|.++|.++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 359999999999999999999999999999999999876311 2499999999876421 123569999999987
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++ .||+||+.+.+...+.. + + ....++.+++.+++........
T Consensus 106 ~~-~tv~enl~~~~~~~~~~---~---~-----------------------------~~~~~~~~l~~~~l~~~l~~~~- 148 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYT---G---D-----------------------------MDELVERSLRKAAVWDECKDKL- 148 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCc---H---H-----------------------------HHHHHHHHHHHhCCcchhhhhh-
Confidence 87 59999998865432110 0 0 0112455677777642111111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+.....|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ + ++|+.++|+..++..+||++++
T Consensus 149 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~i~~ 225 (269)
T PRK14259 149 NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--N-FTIVIVTHNMQQAVRVSDMTAF 225 (269)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEEEE
Confidence 233457999999999999999999999999999999999999999999998853 3 5667788999999999999999
Q ss_pred EcC-----------CeEEEecChhhHH
Q 001154 381 LSE-----------GQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~-----------G~iv~~G~~~~~~ 396 (1136)
|++ |++++.|+++++.
T Consensus 226 l~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 226 FNAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred EeccccccccccccceEEEeCCHHHHH
Confidence 996 6789999988874
No 472
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.6e-34 Score=314.28 Aligned_cols=196 Identities=28% Similarity=0.397 Sum_probs=154.1
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCc
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
..+|+|+||++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 469999999999999999999999999999999999876 468999999987532 234567999999988776 69
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccc-------cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGA-------LIGLPGINGLSTEQRKRLTIAVELVANPSIVF 991 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~-------~~~~~~~~~LSgGqrqrl~ia~aL~~~p~ill 991 (1136)
++|++.+....+ ... ..++.++..++.+..+. ... ..+..||||||||++||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999998743211 111 11222333333221111 111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 992 MDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 992 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.||++++|.+ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999986 7999999999976 34 57999999985 789988874
No 473
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=5.4e-34 Score=299.33 Aligned_cols=160 Identities=24% Similarity=0.455 Sum_probs=141.9
Q ss_pred EEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh----hcccceEEEeccCC---CCCCC
Q 001154 844 LLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ----ETFARISGYCEQND---IHSPG 916 (1136)
Q Consensus 844 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~ 916 (1136)
+|+++||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 8999999999999999999999999999999999876 468999999987643 23456799999984 57788
Q ss_pred CcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 001154 917 LTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPT 996 (1136)
Q Consensus 917 ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPT 996 (1136)
+|++||+.+... ||+|||||++|||||+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999975310 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcE
Q 001154 997 SGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGE 1047 (1136)
Q Consensus 997 sgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~ 1047 (1136)
+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~-G~ 181 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYE-GR 181 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecC-Cc
Confidence 999999999999999998777999999999976 57778999999985 44
No 474
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-34 Score=312.65 Aligned_cols=197 Identities=26% Similarity=0.380 Sum_probs=155.5
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCCh---hcccceEEEeccCCCCCCCCc
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQ---ETFARISGYCEQNDIHSPGLT 918 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lt 918 (1136)
+.+|+|+||++++|++++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++. |
T Consensus 16 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~-t 92 (229)
T cd03254 16 KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSG-T 92 (229)
T ss_pred CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhh-H
Confidence 459999999999999999999999999999999999876 468999999986532 2356679999999887775 9
Q ss_pred HHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccc------cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 001154 919 VLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALI------GLPGINGLSTEQRKRLTIAVELVANPSIVFM 992 (1136)
Q Consensus 919 v~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~------~~~~~~~LSgGqrqrl~ia~aL~~~p~illL 992 (1136)
++||+.+.... .. ...+++.++.+++.+..+... ....+..||+|||||++||++|+.+|++|+|
T Consensus 93 v~~~~~~~~~~-----~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llll 163 (229)
T cd03254 93 IMENIRLGRPN-----AT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILIL 163 (229)
T ss_pred HHHHHhccCCC-----CC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999764211 11 112334444444433222110 0112458999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 993 DEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 993 DEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
||||+|||+.++..+++.|+++. +|+|||++||+++. + +.+|++++|.+ |++++.|+.
T Consensus 164 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~i~~l~~-g~~~~~~~~ 221 (229)
T cd03254 164 DEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLST-I-KNADKILVLDD-GKIIEEGTH 221 (229)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCEEEEEeC-CeEEEeCCH
Confidence 99999999999999999999985 58999999999763 4 56999999984 788887763
No 475
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2e-33 Score=311.14 Aligned_cols=206 Identities=20% Similarity=0.246 Sum_probs=167.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCc-ceeeEEEECCccCCCCCC-CceEEEEeccCC--CCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL-QVSGKITYNGHGFKEFVP-PRTSAYVSQQDW--QVAEM 224 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 224 (1136)
++|+|+|+++++|++++|+||||||||||+++|+|.+++.. +.+|+|.++|.++..... ++.++||+|++. +.+.+
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 48999999999999999999999999999999999987611 149999999988753322 357999999974 44668
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc---cccccccC
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT---CADTLVGD 301 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~---~~dt~vg~ 301 (1136)
|+.+++.+.+...+.. .....+..+++.+||.+ ..++.
T Consensus 97 ~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (254)
T PRK10418 97 TMHTHARETCLALGKP------------------------------------ADDATLTAALEAVGLENAARVLKLY--- 137 (254)
T ss_pred cHHHHHHHHHHHcCCC------------------------------------hHHHHHHHHHHHcCCCChhhhhhcC---
Confidence 9999886643221100 00123677888999975 23443
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
...|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|++++|
T Consensus 138 --~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l 214 (254)
T PRK10418 138 --PFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVM 214 (254)
T ss_pred --CcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEE
Confidence 4569999999999999999999999999999999999999999999998754 3456777889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999987763
No 476
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=311.27 Aligned_cols=212 Identities=21% Similarity=0.290 Sum_probs=168.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC--CCcceeeEEEECCccCCCCC-----CCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEFV-----PPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 220 (1136)
+++|+|+|++|++|++++|+||||||||||+++|+|... +..+.+|+|+++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999875 22135899999998764321 24579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++. ||+||+.+.....+..... ......++.+++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-
Confidence 875 9999998763322110000 001123677888999865322222
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+...+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|+.++|...++.+++|+|++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK---NFTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHhhcCEEEE
Confidence 124467999999999999999999999999999999999999999999998742 45666688889999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 001154 381 LSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1136)
|++|++++.|+.+++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999887663
No 477
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-34 Score=293.88 Aligned_cols=210 Identities=22% Similarity=0.333 Sum_probs=185.8
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCC
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 225 (1136)
.++.+++|+||.++||+|++++|||||||||.+++|.|++.++ +|+|+++|.+++... +..|||.|.+.-+++.+|
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMT 88 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCccCc
Confidence 3567999999999999999999999999999999999999887 999999999886533 346999999999999999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|.|.|.|-++++|.... +....++++|+.+++.......| .
T Consensus 89 v~dql~yla~LkGm~~~----------------------------------e~~~~~~~wLer~~i~~~~~~kI-----k 129 (300)
T COG4152 89 VEDQLKYLAELKGMPKA----------------------------------EIQKKLQAWLERLEIVGKKTKKI-----K 129 (300)
T ss_pred HHHHHHHHHHhcCCcHH----------------------------------HHHHHHHHHHHhccccccccchH-----H
Confidence 99999999999886421 11234788999999987665544 5
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.||-|.+|++.+-.+++.+|++++||||+|||||..++.+-+.+.++.. .+++|+..+|-++.+.++||++++|..|+
T Consensus 130 ~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llmL~kG~ 207 (300)
T COG4152 130 ELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLMLKKGQ 207 (300)
T ss_pred HhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhheecCCc
Confidence 7999999999999999999999999999999999999999999999875 36777778899999999999999999999
Q ss_pred EEEecChhhHHHHHH
Q 001154 386 IVYQGPRVSVLDFFA 400 (1136)
Q Consensus 386 iv~~G~~~~~~~~F~ 400 (1136)
.|.+|+.+++..-|.
T Consensus 208 ~V~~G~v~~ir~~~G 222 (300)
T COG4152 208 TVLYGTVEDIRRSFG 222 (300)
T ss_pred eEEeccHHHHHHhcC
Confidence 999999999987553
No 478
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1e-33 Score=307.80 Aligned_cols=191 Identities=25% Similarity=0.291 Sum_probs=156.2
Q ss_pred eEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEc--Cc--cCCh---hc----ccceEEEeccC
Q 001154 842 LQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYIS--GY--PKRQ---ET----FARISGYCEQN 910 (1136)
Q Consensus 842 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~--g~--~~~~---~~----~~~~~gyv~Q~ 910 (1136)
..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++ |. ++.. .. .++.+||++|+
T Consensus 21 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 98 (224)
T TIGR02324 21 LPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQF 98 (224)
T ss_pred eEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCccchhhcCHHHHHHHHhcceEEEecc
Confidence 579999999999999999999999999999999999876 458999998 42 3221 11 23568999999
Q ss_pred CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 001154 911 DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-SGALIGLPGINGLSTEQRKRLTIAVELVANPSI 989 (1136)
Q Consensus 911 ~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~i 989 (1136)
+.+++.+|++|++.+...... .......+.+.++++.+++.+. .+.. +.+||+|||||++|||||+.+|++
T Consensus 99 ~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~laral~~~p~l 170 (224)
T TIGR02324 99 LRVIPRVSALEVVAEPLLERG---VPREAARARARELLARLNIPERLWHLP-----PATFSGGEQQRVNIARGFIADYPI 170 (224)
T ss_pred cccCCCccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhhCC-----cccCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999987543221 2223334567888999998652 3332 357999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEe
Q 001154 990 VFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMK 1043 (1136)
Q Consensus 990 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~ 1043 (1136)
|+|||||+|||+.++..+.+.|+++.++|+|||++||++. .+...+|+++.+.
T Consensus 171 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 171 LLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 9999999999999999999999999777999999999964 3556799988763
No 479
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.2e-33 Score=311.58 Aligned_cols=206 Identities=25% Similarity=0.349 Sum_probs=167.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCcc-----CCCCCC-------CceEEEEec
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHG-----FKEFVP-------PRTSAYVSQ 216 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~-----~~~~~~-------~~~~~yv~Q 216 (1136)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|. +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 5999999999999999999999999999999999998876 9999999987 544321 346999999
Q ss_pred cCC--CCCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcc-
Q 001154 217 QDW--QVAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDT- 293 (1136)
Q Consensus 217 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~- 293 (1136)
++. +++.+|+.||+.+.....+.. .+ + .....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~------------------~--------------~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGAR-HY------------------G--------------DIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccC-cH------------------H--------------HHHHHHHHHHHHcCCChh
Confidence 973 577789999997642211000 00 0 01223677889999964
Q ss_pred cccccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHh
Q 001154 294 CADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYE 373 (1136)
Q Consensus 294 ~~dt~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~ 373 (1136)
..++.+ ..|||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++.+.. +.+|+.++|+..++.+
T Consensus 144 ~~~~~~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDLP-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVREL-GLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCCC-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHH
Confidence 455544 4699999999999999999999999999999999999999999999886532 5667778899999999
Q ss_pred hcCeEEEEcCCeEEEecChhhHH
Q 001154 374 LFDDVILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 374 ~~D~vilL~~G~iv~~G~~~~~~ 396 (1136)
++|+|++|++|++++.|+.+++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999987763
No 480
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=304.75 Aligned_cols=192 Identities=27% Similarity=0.411 Sum_probs=161.1
Q ss_pred ceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCC-------CCCceEEEEeccCCCCCCCC
Q 001154 153 DLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEF-------VPPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 153 ~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 225 (1136)
|+|+++++ ++++|+|||||||||||++|+|.++|. +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999998876 99999999876421 12357999999998898999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+||+.+..... . . . ....+++.+++.+||++..++.+ .
T Consensus 92 ~~~~l~~~~~~~---~--~------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRK---R--N------R-------------------------EDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhC---C--H------H-------------------------HHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 999998753210 0 0 0 00123677899999987666544 4
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+.+++..++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999987543 4566778899999999999999999999
Q ss_pred EEEec
Q 001154 386 IVYQG 390 (1136)
Q Consensus 386 iv~~G 390 (1136)
++..|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98765
No 481
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=310.07 Aligned_cols=210 Identities=24% Similarity=0.356 Sum_probs=165.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCC--CcceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGH--HLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
++|+|+|++|++||+++|+|||||||||||++|+|.+++ ..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 599999999999999999999999999999999998753 112489999999887531 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+ +||+||+.+.....+.... + .....++++++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-K--------------------------------KLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999886433221000 0 01123566677777643211111 1
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|++++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--D-YTIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEEeCHHHHHhhCCEEEEE
Confidence 23457999999999999999999999999999999999999999999998853 3 45666888888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999887763
No 482
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.3e-33 Score=344.49 Aligned_cols=206 Identities=25% Similarity=0.296 Sum_probs=168.1
Q ss_pred cCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcC-----------------------ccC
Q 001154 839 EDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISG-----------------------YPK 895 (1136)
Q Consensus 839 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g-----------------------~~~ 895 (1136)
++++.+|+|+||++.+||++||+||||||||||+++|+|.....+.+|+|.++| .++
T Consensus 10 ~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 10 FDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred ECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccccccccccccccc
Confidence 345679999999999999999999999999999999999751114689999972 211
Q ss_pred ----------Ch---hcccceEEEeccC-CCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccc
Q 001154 896 ----------RQ---ETFARISGYCEQN-DIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALI 961 (1136)
Q Consensus 896 ----------~~---~~~~~~~gyv~Q~-~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~ 961 (1136)
.. ...++.+||++|+ +.+++.+|++|++.|...... ....+.++++.++++.+++.+..+..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~ 166 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIG---YEGKEAVGRAVDLIEMVQLSHRITHIA 166 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCc
Confidence 00 1234579999997 678888999999988653321 223344567889999999987766543
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCcHHHHHhcCEEE
Q 001154 962 GLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVN-TGRTIVCTIHQPSIDIFESFDELL 1040 (1136)
Q Consensus 962 ~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tii~~~H~~~~~~~~~~d~~~ 1040 (1136)
.+|||||||||+|||||+.+|++|||||||+|||+.++..+++.|+++++ .|.|||++|||++ .+.+.||+++
T Consensus 167 -----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~-~~~~~~d~i~ 240 (520)
T TIGR03269 167 -----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE-VIEDLSDKAI 240 (520)
T ss_pred -----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEE
Confidence 57999999999999999999999999999999999999999999999965 4999999999986 4667899999
Q ss_pred EEecCcEEEEeCCC
Q 001154 1041 FMKRGGELIYAGPL 1054 (1136)
Q Consensus 1041 ~l~~gG~~~~~g~~ 1054 (1136)
+|++ |++++.|+.
T Consensus 241 ~l~~-G~i~~~g~~ 253 (520)
T TIGR03269 241 WLEN-GEIKEEGTP 253 (520)
T ss_pred EEeC-CEEeeecCH
Confidence 9985 788888764
No 483
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-34 Score=319.22 Aligned_cols=210 Identities=24% Similarity=0.385 Sum_probs=171.1
Q ss_pred cceeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCC
Q 001154 146 SKLTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVA 222 (1136)
Q Consensus 146 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 222 (1136)
+.+++|+||||++.||+.+||+||||+||||+|+.|....+-. +|.|+++|+++.... .++.||.||||..+|.
T Consensus 549 p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFN 625 (790)
T KOG0056|consen 549 PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFN 625 (790)
T ss_pred CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeec
Confidence 3457999999999999999999999999999999999988765 999999999986542 3578999999999777
Q ss_pred CCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCc
Q 001154 223 EMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDE 302 (1136)
Q Consensus 223 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~ 302 (1136)
+ |+..||.|+-. +..-+.+.+++ |+. ..-| +++++++.++|+||++
T Consensus 626 d-TI~yNIryak~----~AsneevyaAA------------------kAA--------~IHd---rIl~fPegY~t~VGER 671 (790)
T KOG0056|consen 626 D-TILYNIRYAKP----SASNEEVYAAA------------------KAA--------QIHD---RILQFPEGYNTRVGER 671 (790)
T ss_pred c-eeeeheeecCC----CCChHHHHHHH------------------HHh--------hHHH---HHhcCchhhhhhhhhc
Confidence 5 99999988621 11111111111 110 1112 3678999999999998
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
+.+ |||||||||+|||+++..|.+++|||.||+||..+.++|..+|.+++. ++|+|++.|. .+ +.--+|.|++++
T Consensus 672 GLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvAHR-LS-TivnAD~ILvi~ 746 (790)
T KOG0056|consen 672 GLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVAHR-LS-TIVNADLILVIS 746 (790)
T ss_pred ccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEeee-eh-heecccEEEEEe
Confidence 885 999999999999999999999999999999999999999999999885 5777775543 33 334579999999
Q ss_pred CCeEEEecChhhHHH
Q 001154 383 EGQIVYQGPRVSVLD 397 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~~ 397 (1136)
+|+|++.|..++++.
T Consensus 747 ~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 747 NGRIVERGRHEELLK 761 (790)
T ss_pred CCeEeecCcHHHHHh
Confidence 999999999999874
No 484
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-34 Score=273.36 Aligned_cols=211 Identities=25% Similarity=0.349 Sum_probs=177.1
Q ss_pred cccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCC------h---hcccce
Q 001154 833 KQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKR------Q---ETFARI 903 (1136)
Q Consensus 833 ~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~------~---~~~~~~ 903 (1136)
++.+..|+..++|-||+++...||.+.++||||||||||+++|.-+.. +.+|+..|-|...+ . ...|+.
T Consensus 6 ~~in~~yg~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~fd~s~~~~~k~i~~lr~~ 83 (242)
T COG4161 6 NGINCFYGAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFDFSKTPSDKAIRDLRRN 83 (242)
T ss_pred cccccccccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEecccccccccCccHHHHHHHHHh
Confidence 333444577899999999999999999999999999999999986555 45888888774311 1 246778
Q ss_pred EEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHH
Q 001154 904 SGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVEL 983 (1136)
Q Consensus 904 ~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL 983 (1136)
+|+|+|+..++|.+||.|||.-.. .+. ...++++.+....++++.+.|.+++|+.. -.|||||+|||+|||||
T Consensus 84 vgmvfqqy~lwphltv~enlieap-~kv-~gl~~~qa~~~a~ellkrlrl~~~adr~p-----lhlsggqqqrvaiaral 156 (242)
T COG4161 84 VGMVFQQYNLWPHLTVQENLIEAP-CRV-LGLSKDQALARAEKLLKRLRLKPYADRYP-----LHLSGGQQQRVAIARAL 156 (242)
T ss_pred hhhhhhhhccCchhHHHHHHHhhh-HHH-hCCCHHHHHHHHHHHHHHhccccccccCc-----eecccchhhhHHHHHHH
Confidence 999999999999999999996432 221 13456667778899999999999999753 36999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 984 VANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 984 ~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
+.+|++|++||||+.|||+-...+.++|+++...|.|=|++||..+. .-+.+.+++.|.+ |+++..|+.
T Consensus 157 mmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~v-a~k~as~vvyme~-g~ive~g~a 225 (242)
T COG4161 157 MMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEV-ARKTASRVVYMEN-GHIVEQGDA 225 (242)
T ss_pred hcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhH-HHhhhhheEeeec-CeeEeecch
Confidence 99999999999999999999999999999999999999999998653 4466899999985 899999975
No 485
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-33 Score=311.35 Aligned_cols=187 Identities=24% Similarity=0.356 Sum_probs=157.3
Q ss_pred CceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCCCC--C
Q 001154 840 DRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHSPG--L 917 (1136)
Q Consensus 840 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~--l 917 (1136)
++..+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|. ..++|++|++.+++. .
T Consensus 15 ~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~--------~~i~~v~q~~~~~~~l~~ 84 (251)
T PRK09544 15 GQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK--------LRIGYVPQKLYLDTTLPL 84 (251)
T ss_pred CCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc--------cCEEEeccccccccccCh
Confidence 34579999999999999999999999999999999999876 46899999872 358999999877665 4
Q ss_pred cHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 001154 918 TVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTS 997 (1136)
Q Consensus 918 tv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTs 997 (1136)
|+.+++.+.. ... .+.+.++++.+++.+..+... ..||||||||++||+||+.+|++|+|||||+
T Consensus 85 ~~~~~~~~~~------~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~laral~~~p~lllLDEPt~ 149 (251)
T PRK09544 85 TVNRFLRLRP------GTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGETQRVLLARALLNRPQLLVLDEPTQ 149 (251)
T ss_pred hHHHHHhccc------ccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 7787765321 111 234678899999987766543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCC
Q 001154 998 GLDARAAAIVMRTVRNIVNT-GRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1054 (1136)
Q Consensus 998 gLD~~~~~~i~~~l~~l~~~-g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~ 1054 (1136)
|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|+ + +++..|+.
T Consensus 150 ~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g~~ 204 (251)
T PRK09544 150 GVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSGTP 204 (251)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeCCH
Confidence 99999999999999998765 899999999986 4678899999995 4 68888875
No 486
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.5e-33 Score=313.09 Aligned_cols=198 Identities=25% Similarity=0.279 Sum_probs=161.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 225 (1136)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++ . +|+|.++|.++.... .++.++||+|++.+|+ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 48999999999999999999999999999999999985 3 899999999876542 2467999999999887 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc-------cccccc
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD-------TCADTL 298 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~-------~~~dt~ 298 (1136)
|+||+.+... ...+ .+...++.+||. ...||.
T Consensus 93 v~~nl~~~~~-----~~~~------------------------------------~~~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGK-----WSDE------------------------------------EIWKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccC-----CCHH------------------------------------HHHHHHHHcCCHHHHHhCcccccce
Confidence 9999963211 0000 122333444443 345666
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeE
Q 001154 299 VGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDV 378 (1136)
Q Consensus 299 vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~v 378 (1136)
+++ ....||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|++.. .+++|++++|..+.+.. +|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~---~~~tii~isH~~~~i~~-~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF---ADCTVILSEHRIEAMLE-CQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc---CCCEEEEEECCHHHHHh-CCEE
Confidence 665 456899999999999999999999999999999999999999999999763 24566667888877754 9999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 001154 379 ILLSEGQIVYQGPRVSVLD 397 (1136)
Q Consensus 379 ilL~~G~iv~~G~~~~~~~ 397 (1136)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999864
No 487
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=312.28 Aligned_cols=211 Identities=23% Similarity=0.304 Sum_probs=169.0
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCCC----CCceEEEEeccCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEFV----PPRTSAYVSQQDWQV 221 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 221 (1136)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|. .+.+|+|.++|.++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 46999999999999999999999999999999999998751 124899999998875431 245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+ +||+||+.+......... .. +....+..+++.+||....++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~-------------------~~--------------~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVP-------------------RK--------------EFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCC-------------------HH--------------HHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 899999987532211000 00 00123566788888875332222 1
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
..+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998864 3 56677889999999999999999
Q ss_pred cCCeEEEecChhhHH
Q 001154 382 SEGQIVYQGPRVSVL 396 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~~ 396 (1136)
++|++++.|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988774
No 488
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=310.67 Aligned_cols=209 Identities=22% Similarity=0.291 Sum_probs=166.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCC--cceeeEEEECCccCCCC-----CCCceEEEEeccCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHH--LQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQV 221 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 221 (1136)
++|+|+|+.|++|++++|+||||||||||+++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 5999999999999999999999999999999999997631 13599999999887531 1246799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccC
Q 001154 222 AEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGD 301 (1136)
Q Consensus 222 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~ 301 (1136)
+. ||+||+.+.....+... + + ..+..++++++.+||.....+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~--~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINN--R---R----------------------------VLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCc--H---H----------------------------HHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 99999987643321100 0 0 00123566777888753211111 2
Q ss_pred ccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEE
Q 001154 302 EMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILL 381 (1136)
Q Consensus 302 ~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL 381 (1136)
...+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ + .+++.++|+.+++.+++|++++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999999864 3 45666888899999999999999
Q ss_pred cCCeEEEecChhhH
Q 001154 382 SEGQIVYQGPRVSV 395 (1136)
Q Consensus 382 ~~G~iv~~G~~~~~ 395 (1136)
++|++++.|+.+++
T Consensus 241 ~~G~i~~~g~~~~~ 254 (272)
T PRK14236 241 YMGKLVEYGDTDTL 254 (272)
T ss_pred ECCEEEecCCHHHH
Confidence 99999999988765
No 489
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=353.38 Aligned_cols=213 Identities=26% Similarity=0.361 Sum_probs=175.5
Q ss_pred ceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCcc
Q 001154 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1136)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1136)
..++++|++|.++. .++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEE
Confidence 35888888887631 23569999999999999999999999999999999999877 468999999988
Q ss_pred CCh---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 001154 895 KRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLP 964 (1136)
Q Consensus 895 ~~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~ 964 (1136)
..+ ..+++.++||+|++.+++ -|++||+.++. +.+.+ ++.++++++.+++.+. .|+.++..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 643 456788999999999886 59999998642 11122 2346677777775443 34455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 001154 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1136)
Q Consensus 965 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~ 1044 (1136)
...||||||||++|||||+++|+||+||||||+||+.+...+++.|+++. +++|+|++||+++ ..+.||++++|+
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~- 552 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVE- 552 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEE-
Confidence 35799999999999999999999999999999999999999999999874 5799999999975 567899999998
Q ss_pred CcEEEEeCCC
Q 001154 1045 GGELIYAGPL 1054 (1136)
Q Consensus 1045 gG~~~~~g~~ 1054 (1136)
+|+++..|+.
T Consensus 553 ~g~i~e~g~~ 562 (582)
T PRK11176 553 DGEIVERGTH 562 (582)
T ss_pred CCEEEEeCCH
Confidence 4799999874
No 490
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=9.1e-34 Score=358.18 Aligned_cols=207 Identities=28% Similarity=0.362 Sum_probs=164.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCCC
Q 001154 149 TILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 149 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 225 (1136)
++|+|+|++|+||+.++|+||||||||||+++|+|.++|. +|+|++||.++.+... ++.++||+|++.+|+ .|
T Consensus 488 ~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gT 563 (708)
T TIGR01193 488 NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-GS 563 (708)
T ss_pred cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-HH
Confidence 5999999999999999999999999999999999999886 9999999998876543 578999999998776 59
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
|+|||.++.+. ....+.+.++++. . ..++.++ .|+...||.||+. ..
T Consensus 564 I~eNi~l~~~~---~~~~~~i~~a~~~------------------a---------~l~~~i~--~lp~gldt~i~e~-G~ 610 (708)
T TIGR01193 564 ILENLLLGAKE---NVSQDEIWAACEI------------------A---------EIKDDIE--NMPLGYQTELSEE-GS 610 (708)
T ss_pred HHHHHhccCCC---CCCHHHHHHHHHH------------------h---------CCHHHHH--hcccccCcEecCC-CC
Confidence 99999885211 0001111111110 0 0112221 3667889999974 46
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLSEGQ 385 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~~G~ 385 (1136)
+||||||||++||||++.+|++|+||||||+||+.+...+.+.|+++ .++|+ |.++|..+ +...+|+|++|++|+
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~-IiitHr~~-~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTI-IFVAHRLS-VAKQSDKIIVLDHGK 685 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEE-EEEecchH-HHHcCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999864 24454 44556554 557899999999999
Q ss_pred EEEecChhhHHH
Q 001154 386 IVYQGPRVSVLD 397 (1136)
Q Consensus 386 iv~~G~~~~~~~ 397 (1136)
++..|+++++++
T Consensus 686 i~~~G~~~~L~~ 697 (708)
T TIGR01193 686 IIEQGSHDELLD 697 (708)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 491
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=1.5e-33 Score=305.71 Aligned_cols=194 Identities=25% Similarity=0.357 Sum_probs=158.5
Q ss_pred EEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCccCChhcccceEEEeccCCCCC--CCCcHHHHHHHHh
Q 001154 850 GAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYPKRQETFARISGYCEQNDIHS--PGLTVLESLLFSA 927 (1136)
Q Consensus 850 ~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~ltv~e~l~~~~ 927 (1136)
|+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... .++.++|++|++.++ ..+|+.|++.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIP--PAKGTVKVAGASPGK--GWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccchH--hhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 4688999999999999999999999999876 468999999987532 356799999998664 3479999998753
Q ss_pred hhcC-CCcccHHHHHHHHHHHHHHcCCCccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Q 001154 928 WLRL-PSEIELETQRAFVEEVMELVELTSLSGALIGLPGINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAI 1006 (1136)
Q Consensus 928 ~lr~-~~~~~~~~~~~~v~~~l~~l~l~~~~~~~~~~~~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~ 1006 (1136)
.... .........++.+.++++.+++.+..+..+ .+||+|||||++|||+|+.+|++|+|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPV-----GELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 2110 000011223345788999999987666543 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEecCcEEEEeCCCC
Q 001154 1007 VMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLG 1055 (1136)
Q Consensus 1007 i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~gG~~~~~g~~~ 1055 (1136)
+.+.|+++.++|.|||++||+++ ++.+.+|+++++ + |++++.|+..
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~ 197 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQ 197 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHH
Confidence 99999998877999999999976 477889999998 5 7999988764
No 492
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-33 Score=306.71 Aligned_cols=210 Identities=20% Similarity=0.270 Sum_probs=163.1
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhC--CCcceeeEEEECCccCCCC-----CCCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLG--HHLQVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1136)
+.+|+|+|++|++|++++|+|||||||||||++|+|..+ +....+|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 359999999999999999999999999999999999864 3212489999999876421 124579999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++ .||+||+.+.....+.... +. ....+...++.+|+........
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~l~~~i~~~~- 142 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKDK-AV--------------------------------LDEAVETSLKQAAIWDEVKDHL- 142 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH-HH--------------------------------HHHHHHHHHHHcCCccchhhHH-
Confidence 87 7999999886433221100 00 0112445566666532111111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+..+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++++.++|+..++.+.+|+|++
T Consensus 143 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~ 219 (252)
T PRK14255 143 HESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTAF 219 (252)
T ss_pred hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEEE
Confidence 123457999999999999999999999999999999999999999999999864 3 5666688889999999999999
Q ss_pred EcCCeEEEecChhhH
Q 001154 381 LSEGQIVYQGPRVSV 395 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~ 395 (1136)
|++|+++..|+..++
T Consensus 220 l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 220 FLTGNLIEFADTKQM 234 (252)
T ss_pred EECCEEEEeCCHHHH
Confidence 999999999988765
No 493
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=2.1e-33 Score=309.46 Aligned_cols=200 Identities=27% Similarity=0.400 Sum_probs=167.0
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCCC---CceEEEEeccCCCCCCCCH
Q 001154 150 ILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFVP---PRTSAYVSQQDWQVAEMTV 226 (1136)
Q Consensus 150 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 226 (1136)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999873 2 8999999988754332 2468999999888888999
Q ss_pred HHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCCC
Q 001154 227 RETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLKG 306 (1136)
Q Consensus 227 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~~ 306 (1136)
+||+.+..... . .. ......++++++.+||.+..++.+ +.
T Consensus 87 ~~nl~~~~~~~-~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (248)
T PRK03695 87 FQYLTLHQPDK-T-RT---------------------------------EAVASALNEVAEALGLDDKLGRSV-----NQ 126 (248)
T ss_pred HHHHHhcCccC-C-Cc---------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----cc
Confidence 99998752210 0 00 000224678899999987766654 46
Q ss_pred CChhhhhHHHHHHHHhC-------CCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEE
Q 001154 307 ISGGQKKRLTTGELLVG-------PARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVI 379 (1136)
Q Consensus 307 LSGGqkkRvsia~al~~-------~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vi 379 (1136)
||||||||++||+||+. +|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+..++..++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~--~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQ--GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 67999999999999999999999999998642 4567778899999999999999
Q ss_pred EEcCCeEEEecChhhH
Q 001154 380 LLSEGQIVYQGPRVSV 395 (1136)
Q Consensus 380 lL~~G~iv~~G~~~~~ 395 (1136)
+|++|++++.|+.+++
T Consensus 205 ~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 205 LLKQGKLLASGRRDEV 220 (248)
T ss_pred EEECCEEEEECCHHHH
Confidence 9999999999987765
No 494
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=310.45 Aligned_cols=209 Identities=21% Similarity=0.251 Sum_probs=168.5
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCc--ceeeEEEECCccCCCC-----CCCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1136)
..+|+|+|+.++||++++|+||||||||||+++|+|.++|.. +.+|+|+++|+++... ..++.++|++|++.+
T Consensus 21 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 100 (261)
T PRK14263 21 FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPNP 100 (261)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCcc
Confidence 469999999999999999999999999999999999987511 2489999999987431 124569999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
+ .+|+.||+.++....+.. + .....++++++.+||.+..+...+
T Consensus 101 ~-~~tv~enl~~~~~~~~~~---------------------~--------------~~~~~~~~~l~~~~l~~~i~~~~~ 144 (261)
T PRK14263 101 F-SMSIFDNVAFGLRLNRYK---------------------G--------------DLGDRVKHALQGAALWDEVKDKLK 144 (261)
T ss_pred c-cccHHHHHHHHHhhcCch---------------------H--------------HHHHHHHHHHHHcCCchhhhhhhh
Confidence 6 599999998864322100 0 001236777888888643322222
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
...+.||||||||++|||||+.+|++|+|||||+|||+.++.++.+.|+++.+ +++++.++|+..++.+++|+|++
T Consensus 145 -~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~---~~tii~isH~~~~i~~~~d~v~~ 220 (261)
T PRK14263 145 -VSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK---DYTIALVTHNMQQAIRVADTTAF 220 (261)
T ss_pred -CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCCEEEE
Confidence 34567999999999999999999999999999999999999999999998853 35667788999999999999999
Q ss_pred Ec--------CCeEEEecChhhHH
Q 001154 381 LS--------EGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~--------~G~iv~~G~~~~~~ 396 (1136)
|+ +|++++.|+.+++.
T Consensus 221 l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 221 FSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred EecccccccCCceEEEeCCHHHHH
Confidence 95 89999999988764
No 495
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.7e-34 Score=352.18 Aligned_cols=210 Identities=25% Similarity=0.376 Sum_probs=175.8
Q ss_pred ceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCcc
Q 001154 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1136)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1136)
..++++|++|.++ ++..+|+|+|++++|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~------------~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYR------------DDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeC------------CCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEE
Confidence 3578888888763 12359999999999999999999999999999999999877 468999999987
Q ss_pred CC---hhcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCccc-------cccccCC
Q 001154 895 KR---QETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSLS-------GALIGLP 964 (1136)
Q Consensus 895 ~~---~~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~~-------~~~~~~~ 964 (1136)
+. ...+++.++||+|++.++++ |++||+.++. +.+ ++.++++++.+++.+.. |..++..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 64 34678899999999999986 9999998752 111 23467788888876433 3444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 001154 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1136)
Q Consensus 965 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~ 1044 (1136)
...||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++. +++|+|++||+++ ....+|++++|+
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~-~~~tvIivtHr~~--~l~~~D~ii~l~- 548 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR-EHTTLVVIAHRLS--TIVEADTILVLH- 548 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEE-
Confidence 35799999999999999999999999999999999999999999999875 4799999999975 567799999998
Q ss_pred CcEEEEeCCC
Q 001154 1045 GGELIYAGPL 1054 (1136)
Q Consensus 1045 gG~~~~~g~~ 1054 (1136)
+|+++..|+.
T Consensus 549 ~G~i~~~G~~ 558 (592)
T PRK10790 549 RGQAVEQGTH 558 (592)
T ss_pred CCEEEEEcCH
Confidence 5899999985
No 496
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.2e-32 Score=343.12 Aligned_cols=212 Identities=27% Similarity=0.428 Sum_probs=173.5
Q ss_pred ceeeeecceeeeeccccccccccccCceEEEeeeEEEEECCcEEEEEccCCCChhHHHhcccCCCCCceeEEEEEEcCcc
Q 001154 815 LSMAFGNINYFVDVPVELKQEGVLEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGIIEGDIYISGYP 894 (1136)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 894 (1136)
..++++|++|.++. +++.+|+|+|++++|||++||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEe
Confidence 35788888877631 23469999999999999999999999999999999999876 468999999998
Q ss_pred CCh---hcccceEEEeccCCCCCCCCcHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHcCCCcc-------ccccccCC
Q 001154 895 KRQ---ETFARISGYCEQNDIHSPGLTVLESLLFSAWLRLPSEIELETQRAFVEEVMELVELTSL-------SGALIGLP 964 (1136)
Q Consensus 895 ~~~---~~~~~~~gyv~Q~~~~~~~ltv~e~l~~~~~lr~~~~~~~~~~~~~v~~~l~~l~l~~~-------~~~~~~~~ 964 (1136)
+++ ..+++.+|||+|++.+++ .|++||+.++. + +.+ ++.+.++++..++.+. .|..++..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN----P-GAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC----C-CCC----HHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 653 456788999999988886 59999997632 1 122 2335566666665443 24444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCcHHHHHhcCEEEEEec
Q 001154 965 GINGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKR 1044 (1136)
Q Consensus 965 ~~~~LSgGqrqrl~ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tii~~~H~~~~~~~~~~d~~~~l~~ 1044 (1136)
..+||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++. +++|+|++||+++ ..+.+|++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 45799999999999999999999999999999999999999999999874 6899999999976 4567999999985
Q ss_pred CcEEEEeCCC
Q 001154 1045 GGELIYAGPL 1054 (1136)
Q Consensus 1045 gG~~~~~g~~ 1054 (1136)
|++++.|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 799999974
No 497
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=308.88 Aligned_cols=208 Identities=24% Similarity=0.302 Sum_probs=165.8
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCc--ceeeEEEECCccCCCC-----CCCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1136)
+++|+|+|+.|++|++++|+|||||||||||++|+|.+.|.. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 469999999999999999999999999999999999986531 1489999999887531 124579999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCc----cccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLD----TCAD 296 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~----~~~d 296 (1136)
++.+|+.||+.++....+... .+ .....++.+++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRD-RD--------------------------------HLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCC-HH--------------------------------HHHHHHHHHHHHcCcchhhhhhhc
Confidence 999999999987543221100 00 0011244455555543 2334
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcC
Q 001154 297 TLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFD 376 (1136)
Q Consensus 297 t~vg~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D 376 (1136)
+. ++.||||||||++||+||+.+|++|+|||||+|||..++..+.+.|+++++ + ++++.++|+..++.+++|
T Consensus 144 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 TP-----ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 43 456999999999999999999999999999999999999999999998853 3 566778888999999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 001154 377 DVILLSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 377 ~vilL~~G~iv~~G~~~~~~ 396 (1136)
+|++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 498
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.6e-33 Score=308.88 Aligned_cols=205 Identities=25% Similarity=0.381 Sum_probs=158.9
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCcceeeEEEECCccCCCCC---CCceEEEEeccCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHLQVSGKITYNGHGFKEFV---PPRTSAYVSQQDWQVAEM 224 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 224 (1136)
+.+|+|+|+++++|++++|+|||||||||||++|+|.+++. +|+|.++|.++.... .++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 45999999999999999999999999999999999999876 999999998765322 245799999998766 47
Q ss_pred CHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHh--CCcccccccccCc
Q 001154 225 TVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKIL--GLDTCADTLVGDE 302 (1136)
Q Consensus 225 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~l--gL~~~~dt~vg~~ 302 (1136)
||+||+.+... . ...+.+.+... ......+++.+ |++...+.
T Consensus 91 tv~~nl~~~~~--~--~~~~~~~~~~~---------------------------~~~~~~~l~~l~~~~~~~~~~----- 134 (237)
T cd03252 91 SIRDNIALADP--G--MSMERVIEAAK---------------------------LAGAHDFISELPEGYDTIVGE----- 134 (237)
T ss_pred hHHHHhhccCC--C--CCHHHHHHHHH---------------------------HcCcHHHHHhCcccccchhhc-----
Confidence 99999987432 1 00010000000 00123344444 44433333
Q ss_pred cCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEEEc
Q 001154 303 MLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVILLS 382 (1136)
Q Consensus 303 ~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vilL~ 382 (1136)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+.+++. .+|++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~-~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA--G-RTVIIIAHRLSTVK-NADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC--C-CEEEEEeCCHHHHH-hCCEEEEEE
Confidence 3457999999999999999999999999999999999999999999998852 4 45666777777774 699999999
Q ss_pred CCeEEEecChhhHH
Q 001154 383 EGQIVYQGPRVSVL 396 (1136)
Q Consensus 383 ~G~iv~~G~~~~~~ 396 (1136)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (237)
T cd03252 211 KGRIVEQGSHDELL 224 (237)
T ss_pred CCEEEEEcCHHHHH
Confidence 99999999987764
No 499
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3.8e-33 Score=295.84 Aligned_cols=170 Identities=39% Similarity=0.646 Sum_probs=147.2
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhh--CCCcceeeEEEECCccCCCCCCCceEEEEeccCCCCCCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRL--GHHLQVSGKITYNGHGFKEFVPPRTSAYVSQQDWQVAEMT 225 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l--~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 225 (1136)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ ++. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 46999999999999999999999999999999999998 665 9999999998764334567999999998889999
Q ss_pred HHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCcccccccccCccCC
Q 001154 226 VRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVGDEMLK 305 (1136)
Q Consensus 226 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg~~~~~ 305 (1136)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999763100 0
Q ss_pred CCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChh-HHHhhcCeEEEEcCC
Q 001154 306 GISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAP-EAYELFDDVILLSEG 384 (1136)
Q Consensus 306 ~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~-~~~~~~D~vilL~~G 384 (1136)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++... +.| ++.++|..+ ++.+++|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~-~~t-iii~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADT-GRT-IICSIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCE-EEEEecCchHHHHHhcCEEEEEeCC
Confidence 49999999999999999999999999999999999999999999988653 444 555666654 788999999999999
Q ss_pred eEEEec
Q 001154 385 QIVYQG 390 (1136)
Q Consensus 385 ~iv~~G 390 (1136)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998764
No 500
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=309.14 Aligned_cols=211 Identities=23% Similarity=0.305 Sum_probs=166.6
Q ss_pred eeeeeceeEEEeCCeEEEEEcCCCCChhHHHHHHHhhhCCCc--ceeeEEEECCccCCCC-----CCCceEEEEeccCCC
Q 001154 148 LTILDDLSGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGHHL--QVSGKITYNGHGFKEF-----VPPRTSAYVSQQDWQ 220 (1136)
Q Consensus 148 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~LaG~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 220 (1136)
+.+|+|+|+++++|++++|+||||||||||+++|+|..++.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 98 (253)
T PRK14261 19 KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNP 98 (253)
T ss_pred eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCcc
Confidence 359999999999999999999999999999999999875321 2489999999987542 124569999999987
Q ss_pred CCCCCHHHHHHHhhhhcCCCCchhhhHHHHHHHHHhCCCCCchhHHHHHHhhccCcchhHHHHHHHHHhCCccccccccc
Q 001154 221 VAEMTVRETLDFAGQCQGVGSKYDMITELARREKIAGIKPDEDLDIFMKSFALGGQKTSLVVEYIMKILGLDTCADTLVG 300 (1136)
Q Consensus 221 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~vl~~lgL~~~~dt~vg 300 (1136)
++. ||+||+.|..+..+.... ......+..+++.++|.+...+..
T Consensus 99 ~~~-tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~- 143 (253)
T PRK14261 99 FPK-SIYENVAYGPRIHGEKNK---------------------------------KTLDTIVEKSLKGAALWDEVKDRL- 143 (253)
T ss_pred Ccc-cHHHHHHhhHHhcCCCCH---------------------------------HHHHHHHHHHHHHhcCchhhHHHh-
Confidence 874 999999986443211000 000123566677777743211111
Q ss_pred CccCCCCChhhhhHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEEecChhHHHhhcCeEEE
Q 001154 301 DEMLKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTYQIIKYLKHSTRALDGTTVISLLQPAPEAYELFDDVIL 380 (1136)
Q Consensus 301 ~~~~~~LSGGqkkRvsia~al~~~p~vlllDEptsgLD~~t~~~i~~~l~~~~~~~~~t~ii~~~q~~~~~~~~~D~vil 380 (1136)
+...+.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+.+++.+++|++++
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~ 220 (253)
T PRK14261 144 HDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGF 220 (253)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEE
Confidence 234557999999999999999999999999999999999999999999998864 3 5666688899999999999999
Q ss_pred EcCCeEEEecChhhHH
Q 001154 381 LSEGQIVYQGPRVSVL 396 (1136)
Q Consensus 381 L~~G~iv~~G~~~~~~ 396 (1136)
|++|+++..|+.+++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 221 MYLGKLIEFDKTTQIF 236 (253)
T ss_pred EECCEEEEcCCHHHHH
Confidence 9999999999987763
Done!