BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001155
(1136 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255579679|ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative [Ricinus communis]
Length = 1233
Score = 1617 bits (4188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 815/1167 (69%), Positives = 930/1167 (79%), Gaps = 60/1167 (5%)
Query: 1 MTGQIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQ 60
+T QIQ+F RL S +VEKAWH LS LQIS RNY++PG + P+++++ +V +R +
Sbjct: 69 LTCQIQSFQRLQSPQVEKAWHALSCLQISCRNYLQPGKTGPLKNAN--LLQDVGQRPTFC 126
Query: 61 SSSDGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKASV 120
SSSDG K+SE ++ Q S+ N+ R G++ +N A G GL+ Q++IKAS
Sbjct: 127 SSSDGGKYSECLHVHQNFSESGAKNNKSERYMGNYVPQDNATAAETGNGLQRQSQIKASA 186
Query: 121 VANAHFK-FSDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPK 179
N K FS F +H+ ESAE + IDDD++L IDVDQIVMEH S+CTP
Sbjct: 187 ANNTESKTFSGSFSDHSVYTSHNKESAEASTDFIDDDDLLGNIDVDQIVMEHNQSNCTP- 245
Query: 180 PSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAI 239
P+ S+ PSITP A FAR DE LP ELC CNHG KLGLCPE +H+Q+MKDMLIA+
Sbjct: 246 PN-SKFPSITPTADKHNFARSDEMFLPTELCQNCNHGFKLGLCPEAGNHLQEMKDMLIAV 304
Query: 240 SNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSASTT-RTYQYET 298
SNELLDN+TNLS Q EKLRQ+RLQL+KQIQ LE Y + +ERQKSHFSAST + +QYET
Sbjct: 305 SNELLDNSTNLSSVQIEKLRQDRLQLNKQIQQLESYLRDKERQKSHFSASTANQNFQYET 364
Query: 299 PQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREPFIPKIIK 358
PQ A KIDP+RFD QV+L NES GY +WN+ S+SFSSVDR G+SS P+EREP+IPK ++
Sbjct: 365 PQCAANKIDPMRFDAQVYLRNESGGYESWNTPSISFSSVDRFGISSGPIEREPYIPKFVE 424
Query: 359 VNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTG 418
VNYIEGSND KWSS +FPWT KLEA NKKVFGNHSFRPNQRE+INATMSG DVFVLMPTG
Sbjct: 425 VNYIEGSNDPKWSSTNFPWTTKLEAYNKKVFGNHSFRPNQREVINATMSGFDVFVLMPTG 484
Query: 419 GGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRE 478
GGKSLTYQLPAL+CPGITLVISPLVSLIQDQIMHLLQANI A +LS NMEW EQQEILRE
Sbjct: 485 GGKSLTYQLPALVCPGITLVISPLVSLIQDQIMHLLQANISAAYLSANMEWAEQQEILRE 544
Query: 479 LNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQ 538
L+SDYCKYKLLYVTPEKVAKSDVLLR LESLNAR LLARIVIDEAHCVSQWGHDFRPDY+
Sbjct: 545 LSSDYCKYKLLYVTPEKVAKSDVLLRNLESLNARGLLARIVIDEAHCVSQWGHDFRPDYK 604
Query: 539 GLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW--------- 589
LGILK+KF TPVLALTATATASVKEDVVQALGLV+CIIFRQSFNRPNLW
Sbjct: 605 ELGILKKKFEKTPVLALTATATASVKEDVVQALGLVDCIIFRQSFNRPNLWYSVVPKTKK 664
Query: 590 -------------------------MDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHK 624
MDCEKVAE+LQ ECGHK
Sbjct: 665 CLDDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQ-------------------ECGHK 705
Query: 625 AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 684
AAFYHG++D AQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ
Sbjct: 706 AAFYHGNMDAAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 765
Query: 685 ECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNT 744
ECGRAGRDG RSSCVLYYSYSD+IRVKHMI QG EQSP+TPG+NR N NS R+LE NT
Sbjct: 766 ECGRAGRDGLRSSCVLYYSYSDYIRVKHMIVQGQIEQSPWTPGYNRINNTNSDRILEKNT 825
Query: 745 ENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLV 804
ENLLRMVSYCENDVDCRR+LQL+HFGEKF+S +CKKTCDNCS+IK+ +EKDVT+TAK+LV
Sbjct: 826 ENLLRMVSYCENDVDCRRILQLLHFGEKFNSGNCKKTCDNCSQIKALVEKDVTETAKQLV 885
Query: 805 ELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIED 864
+LVKLTGQQFSSSHILEV+RGSLNQYVKK+RHETLSLHGAGKHL+K EASRILRHLV +D
Sbjct: 886 QLVKLTGQQFSSSHILEVYRGSLNQYVKKYRHETLSLHGAGKHLSKGEASRILRHLVTDD 945
Query: 865 FLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGS 924
FL E+VKKSDVYGSVSS+LKVN+SKA+NL G Q ++LRFPS + ++K SK D TPAKGS
Sbjct: 946 FLQEDVKKSDVYGSVSSILKVNESKAYNLCSGGQTIILRFPSTMKASKPSKFDATPAKGS 1005
Query: 925 LLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQ 984
L SGK SP D+P+Q Q EVDL+LSA LYS+LRMLRTLLVKEAGEGVMAYHIFGNATLQ
Sbjct: 1006 LTSGKQSPPEVDSPAQAQPEVDLHLSAILYSALRMLRTLLVKEAGEGVMAYHIFGNATLQ 1065
Query: 985 HLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGK 1044
HLSKR+PRT+EELLEINGIGKAKVSKYG RLLETIESTIKE+YKTDKN SSSN SNDS K
Sbjct: 1066 HLSKRIPRTKEELLEINGIGKAKVSKYGDRLLETIESTIKEYYKTDKNSSSSNGSNDSVK 1125
Query: 1045 RRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECV-DDLDFDE 1103
RRRD + APN N + DDFTKST RSKKR +K QNK ++ E ++ +C+ DDLDF++
Sbjct: 1126 RRRDASRAPNGNAEEADDFTKSTGRSKKRVAKLQNKDTDIYTSRETNNSQCLDDDLDFED 1185
Query: 1104 YEYVYEMNGSTTKPDQNNGGRVLPRWS 1130
+ +E NGS + +N+ GRVLP WS
Sbjct: 1186 SCHDFETNGSAIEAGKNDAGRVLPSWS 1212
>gi|224070434|ref|XP_002303149.1| predicted protein [Populus trichocarpa]
gi|222840581|gb|EEE78128.1| predicted protein [Populus trichocarpa]
Length = 1194
Score = 1568 bits (4061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/1125 (69%), Positives = 900/1125 (80%), Gaps = 59/1125 (5%)
Query: 5 IQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSSD 64
+QN RL S++VEKAWH LS+LQIS RNYIRPG + PV++ D S NV +R + QSSS+
Sbjct: 70 VQNPQRLQSSQVEKAWHALSTLQISSRNYIRPGQTGPVKNVSEDLSGNVGQRPTFQSSSN 129
Query: 65 GSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKAS--VVA 122
SK+SE + ++ S N +E A+ TG+ ++N +G ++IKAS V
Sbjct: 130 ISKYSEGVYAQKNLSGKN---SEAAKHTGNVIPADNASHVQSGNNQGWPSDIKASSGVNT 186
Query: 123 NAHFKFSDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKPSI 182
N + F NHT + Q E E A+ IDDD+++E+IDVDQIVMEHY ++CTP+P+I
Sbjct: 187 NQSNVLAGSFVNHTVQTCQTKEFVETSADYIDDDDLIESIDVDQIVMEHYQATCTPQPAI 246
Query: 183 SRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAISNE 242
S+ P ITP A + F R +E +PPELCS C+HG KLGLCPE + H+Q+MKDMLIA+SN+
Sbjct: 247 SKFPPITPTADQNSFIRPEEISVPPELCSNCSHGFKLGLCPEAAKHLQEMKDMLIAVSND 306
Query: 243 LLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSAST-TRTYQYETPQP 301
LLDNA LS AQ +KLRQ+RLQL+KQIQ LE Y + EERQKSHFSAST R QYETPQ
Sbjct: 307 LLDNAAELSQAQIDKLRQDRLQLNKQIQQLEKYLRDEERQKSHFSASTLVRNLQYETPQS 366
Query: 302 AVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREPFIPKIIKVNY 361
A KIDP+RFD QVHL N+ GY WN+ SVSFSS+D GVSS P+EREP+IP ++VNY
Sbjct: 367 AACKIDPMRFDAQVHLRNDLNGYEKWNAPSVSFSSIDSFGVSSVPLEREPYIPSFVEVNY 426
Query: 362 IEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGK 421
IEGSND KWSS +FPWTKKLEANNKKVFGNHSFRPNQRE+INATMSG+DVFVLMPTGGGK
Sbjct: 427 IEGSNDPKWSSTNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGK 486
Query: 422 SLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS 481
SLTYQLPAL+CPGITLVISPLVSLIQDQIMHLLQANIPA +LS NMEWTEQQEILREL S
Sbjct: 487 SLTYQLPALVCPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTEQQEILRELCS 546
Query: 482 DYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLG 541
DYCKY+LLYVTPEKVAKSDVLLR LESLN R LLARIVIDEAHCVSQWGHDFRPDY+ LG
Sbjct: 547 DYCKYRLLYVTPEKVAKSDVLLRNLESLNGRGLLARIVIDEAHCVSQWGHDFRPDYKELG 606
Query: 542 ILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW------------ 589
ILK+KF TPVLALTATATASVKEDVVQALGLV+CI+FRQSFNRPNLW
Sbjct: 607 ILKKKFEKTPVLALTATATASVKEDVVQALGLVDCIVFRQSFNRPNLWYSVIPKTKKCLE 666
Query: 590 ----------------------MDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAF 627
MDCEKVAE+LQ ECGHK AF
Sbjct: 667 DIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQ-------------------ECGHKTAF 707
Query: 628 YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 687
YHG++D AQR+FVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG
Sbjct: 708 YHGNMDAAQRSFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 767
Query: 688 RAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENL 747
RAGRDGQRSSCVLYYSYSD+IRVKHMI QG AEQSP+T G R N+ +S R+LE NTENL
Sbjct: 768 RAGRDGQRSSCVLYYSYSDYIRVKHMIIQGQAEQSPWTAGCGRNNMKSSDRILEKNTENL 827
Query: 748 LRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV 807
LRMVSY ENDVDCRRLLQL+HFGEKFD+ +C TCDNCSKIK+ +E+DVT++AK+LVELV
Sbjct: 828 LRMVSYSENDVDCRRLLQLLHFGEKFDAGNCGNTCDNCSKIKTLVERDVTESAKQLVELV 887
Query: 808 KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLM 867
KLTGQ FSSSHILEV+RGSL+Q+VK+HRHE LSLHGAGKHLAK EASRILRHLVIEDFL
Sbjct: 888 KLTGQHFSSSHILEVYRGSLSQFVKRHRHENLSLHGAGKHLAKGEASRILRHLVIEDFLA 947
Query: 868 EEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLS 927
E+VKKSD YGSVSSVLKVN+SKAH L G Q +VLRFPS++ ++K KS+ TPAKGSL+S
Sbjct: 948 EDVKKSDFYGSVSSVLKVNESKAHKLCSGGQRIVLRFPSSVKASKQGKSEATPAKGSLMS 1007
Query: 928 GKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLS 987
GKLSP + +P+QPQ+EVDLNLSAKL+S+LRMLRT L+KEAG+GVMAYHIFGNATLQH+S
Sbjct: 1008 GKLSPPQAGSPAQPQSEVDLNLSAKLFSALRMLRTALLKEAGDGVMAYHIFGNATLQHMS 1067
Query: 988 KRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRR 1047
KR+PRT+EELLEINGIGKAKVSKYG R+LETIESTI+E+ K D+N S SN+S+DS KRRR
Sbjct: 1068 KRIPRTKEELLEINGIGKAKVSKYGDRVLETIESTIREYNKGDRNSSGSNESSDSIKRRR 1127
Query: 1048 DENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDS 1092
D ++A N N ++D+FTKST RSKKR + QNK EV N EP S
Sbjct: 1128 DASKALNGNMEEEDEFTKSTGRSKKRTATRQNKGSEVHNSMEPVS 1172
>gi|297739574|emb|CBI29756.3| unnamed protein product [Vitis vinifera]
Length = 1235
Score = 1504 bits (3895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 790/1173 (67%), Positives = 907/1173 (77%), Gaps = 68/1173 (5%)
Query: 1 MTGQIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQ 60
M QIQ+ RL S +VEKAW LSSL++S RNY +PG P+ + R+ +LQ
Sbjct: 41 MICQIQHIQRLQSLQVEKAWGALSSLKLSSRNYSKPGKMAPLLKDASVEFPRDVRKCNLQ 100
Query: 61 SSSD-GSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKAS 119
SS + +++ E Q + N + +E A C G+ S + AG+ GQNE K S
Sbjct: 101 SSHNTNNQYLEHNLPHQNLGETNSSYSETASCRGNSFRSGSACAENAGRE-GGQNETKPS 159
Query: 120 VVANAHFKF-SDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTP 178
++ N+H + G GQ+ E N DDD+ILE IDVDQIVMEHY S+CTP
Sbjct: 160 MLYNSHIQVVGQSSGTCNVHTGQVKELVGAFPNGTDDDDILEDIDVDQIVMEHYQSTCTP 219
Query: 179 KPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIA 238
+PSIS+LP +TP A+ +ET LP ELCS C+HG KLGLCPE ++H+Q++KDMLI
Sbjct: 220 QPSISKLPPVTPTLSTVNIAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDMLIV 279
Query: 239 ISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQA----EERQKSHFSASTTRTY 294
ISNELLDN +L+ Q EKLRQ+RL L+KQIQ LE + + EER+ S+FSASTT +
Sbjct: 280 ISNELLDN-VDLTSVQVEKLRQDRLYLNKQIQQLEIHLHSVSVDEERKNSNFSASTTTPW 338
Query: 295 -QYETPQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREPFI 353
Q++TP + IDP+RFD QVHL NE Y WN+SSVSFSS+DR GV+ YP+EREP+I
Sbjct: 339 AQFQTPPATAVGIDPMRFDAQVHLRNEPGNYEKWNTSSVSFSSIDRFGVTPYPLEREPYI 398
Query: 354 PKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFV 413
PK+I+VNYIEGS+D+KWSS +FPWTKKLEANNKKVFGNHSFRPNQRE+INATMSG+DVFV
Sbjct: 399 PKLIEVNYIEGSSDKKWSSGNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFV 458
Query: 414 LMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQ 473
LMPTGGGKSLTYQLPALI PGITLVISPLVSLIQDQIMHLLQANIPA +LS +MEW EQQ
Sbjct: 459 LMPTGGGKSLTYQLPALISPGITLVISPLVSLIQDQIMHLLQANIPAAYLSASMEWNEQQ 518
Query: 474 EILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDF 533
EILREL+S CKYKLLY TPEKVAKSDVL+R L++L+ARELL+RIVIDEAHCVSQWGHDF
Sbjct: 519 EILRELSS--CKYKLLYATPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDF 576
Query: 534 RPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW---- 589
RPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW
Sbjct: 577 RPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVL 636
Query: 590 ------------------------------MDCEKVAERLQVGLSYGHFFLLKEFYVVSL 619
+DCEKVAERLQ
Sbjct: 637 PKTRKCLDDIDKFIRENHFDECGIIYCLSRLDCEKVAERLQ------------------- 677
Query: 620 ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSI 679
ECGHKAAFYHGS+DPA+RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSI
Sbjct: 678 ECGHKAAFYHGSMDPARRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSI 737
Query: 680 EGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRV 739
EGYHQECGRAGRDGQRSSCVLYYSYSD+IRVKHMI+QGV EQSP G NR N+A+SGR+
Sbjct: 738 EGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRI 797
Query: 740 LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDT 799
LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC KIKSF+EKDVT+
Sbjct: 798 LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCLKIKSFVEKDVTEI 857
Query: 800 AKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRH 859
AK+LVELVKLT +QFSSSHILEV+RGSL+QYVKKHRHETL LH AGKHLAK EASRILRH
Sbjct: 858 AKQLVELVKLTREQFSSSHILEVYRGSLSQYVKKHRHETLGLHAAGKHLAKGEASRILRH 917
Query: 860 LVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVT 919
LV EDFLME+VKKSD+YGSVSSVLKVN+SK + L G Q ++LRFPS+ S+KLS + T
Sbjct: 918 LVTEDFLMEDVKKSDIYGSVSSVLKVNESKVYKLFSGGQKIILRFPSSAKSSKLSNFEAT 977
Query: 920 PAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFG 979
PAKGSL SGKLSP R +TP+ EVDLNLSAKLYS+LR+LRT+LVKEAGEGVMAYHIFG
Sbjct: 978 PAKGSLTSGKLSPPRIETPAH-LPEVDLNLSAKLYSALRILRTVLVKEAGEGVMAYHIFG 1036
Query: 980 NATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDS 1039
NATLQ +SKR+PRT+EELLE+NGIGKAK+SKYG R+LETIESTIKE+YKTDKN SSSNDS
Sbjct: 1037 NATLQQISKRIPRTKEELLEVNGIGKAKISKYGDRVLETIESTIKEYYKTDKNSSSSNDS 1096
Query: 1040 NDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSY-ECVDD 1098
D+ KRRR+ + +AN +DDDFTKST RS+ RA K NK E N E D Y +C+DD
Sbjct: 1097 TDTIKRRRESAKVLDANP-EDDDFTKSTDRSRGRAMKRHNKGGEANNTRETDYYNQCIDD 1155
Query: 1099 LDFDEYEYV-YEMNGSTTKPDQNNGGRVLPRWS 1130
+ +NGS K D++ R LP WS
Sbjct: 1156 DLDFDDANCDVAINGSAPKVDRDGARRTLPSWS 1188
>gi|225448193|ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis vinifera]
Length = 1224
Score = 1487 bits (3850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 780/1155 (67%), Positives = 895/1155 (77%), Gaps = 68/1155 (5%)
Query: 19 AWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSSD-GSKFSEPMNNRQK 77
AW LSSL++S RNY +PG P+ + R+ +LQSS + +++ E Q
Sbjct: 48 AWGALSSLKLSSRNYSKPGKMAPLLKDASVEFPRDVRKCNLQSSHNTNNQYLEHNLPHQN 107
Query: 78 GSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKASVVANAHFKF-SDGFGNHT 136
+ N + +E A C G+ S + AG+ GQNE K S++ N+H + G
Sbjct: 108 LGETNSSYSETASCRGNSFRSGSACAENAGRE-GGQNETKPSMLYNSHIQVVGQSSGTCN 166
Query: 137 TEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKPSISRLPSITPNAGNDK 196
GQ+ E N DDD+ILE IDVDQIVMEHY S+CTP+PSIS+LP +TP
Sbjct: 167 VHTGQVKELVGAFPNGTDDDDILEDIDVDQIVMEHYQSTCTPQPSISKLPPVTPTLSTVN 226
Query: 197 FARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAISNELLDNATNLSPAQTE 256
A+ +ET LP ELCS C+HG KLGLCPE ++H+Q++KDMLI ISNELLDN +L+ Q E
Sbjct: 227 IAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDMLIVISNELLDN-VDLTSVQVE 285
Query: 257 KLRQERLQLSKQIQLLEGYRQA----EERQKSHFSASTTRTY-QYETPQPAVLKIDPIRF 311
KLRQ+RL L+KQIQ LE + + EER+ S+FSASTT + Q++TP + IDP+RF
Sbjct: 286 KLRQDRLYLNKQIQQLEIHLHSVSVDEERKNSNFSASTTTPWAQFQTPPATAVGIDPMRF 345
Query: 312 DTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWS 371
D QVHL NE Y WN+SSVSFSS+DR GV+ YP+EREP+IPK+I+VNYIEGS+D+KWS
Sbjct: 346 DAQVHLRNEPGNYEKWNTSSVSFSSIDRFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWS 405
Query: 372 SWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI 431
S +FPWTKKLEANNKKVFGNHSFRPNQRE+INATMSG+DVFVLMPTGGGKSLTYQLPALI
Sbjct: 406 SGNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALI 465
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYV 491
PGITLVISPLVSLIQDQIMHLLQANIPA +LS +MEW EQQEILREL+S CKYKLLY
Sbjct: 466 SPGITLVISPLVSLIQDQIMHLLQANIPAAYLSASMEWNEQQEILRELSS--CKYKLLYA 523
Query: 492 TPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 551
TPEKVAKSDVL+R L++L+ARELL+RIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP
Sbjct: 524 TPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 583
Query: 552 VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW---------------------- 589
VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW
Sbjct: 584 VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVLPKTRKCLDDIDKFIRENH 643
Query: 590 ------------MDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQR 637
+DCEKVAERLQ ECGHKAAFYHGS+DPA+R
Sbjct: 644 FDECGIIYCLSRLDCEKVAERLQ-------------------ECGHKAAFYHGSMDPARR 684
Query: 638 AFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSS 697
AFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSS
Sbjct: 685 AFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSS 744
Query: 698 CVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCEND 757
CVLYYSYSD+IRVKHMI+QGV EQSP G NR N+A+SGR+LETNTENLLRMVSYCEND
Sbjct: 745 CVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILETNTENLLRMVSYCEND 804
Query: 758 VDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSS 817
VDCRRLLQLVHFGEKFDSAHCKKTCDNC KIKSF+EKDVT+ AK+LVELVKLT +QFSSS
Sbjct: 805 VDCRRLLQLVHFGEKFDSAHCKKTCDNCLKIKSFVEKDVTEIAKQLVELVKLTREQFSSS 864
Query: 818 HILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYG 877
HILEV+RGSL+QYVKKHRHETL LH AGKHLAK EASRILRHLV EDFLME+VKKSD+YG
Sbjct: 865 HILEVYRGSLSQYVKKHRHETLGLHAAGKHLAKGEASRILRHLVTEDFLMEDVKKSDIYG 924
Query: 878 SVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDT 937
SVSSVLKVN+SK + L G Q ++LRFPS+ S+KLS + TPAKGSL SGKLSP R +T
Sbjct: 925 SVSSVLKVNESKVYKLFSGGQKIILRFPSSAKSSKLSNFEATPAKGSLTSGKLSPPRIET 984
Query: 938 PSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEEL 997
P+ EVDLNLSAKLYS+LR+LRT+LVKEAGEGVMAYHIFGNATLQ +SKR+PRT+EEL
Sbjct: 985 PAH-LPEVDLNLSAKLYSALRILRTVLVKEAGEGVMAYHIFGNATLQQISKRIPRTKEEL 1043
Query: 998 LEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNANK 1057
LE+NGIGKAK+SKYG R+LETIESTIKE+YKTDKN SSSNDS D+ KRRR+ + +AN
Sbjct: 1044 LEVNGIGKAKISKYGDRVLETIESTIKEYYKTDKNSSSSNDSTDTIKRRRESAKVLDANP 1103
Query: 1058 GDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSY-ECVDDLDFDEYEYV-YEMNGSTT 1115
+DDDFTKST RS+ RA K NK E N E D Y +C+DD + +NGS
Sbjct: 1104 -EDDDFTKSTDRSRGRAMKRHNKGGEANNTRETDYYNQCIDDDLDFDDANCDVAINGSAP 1162
Query: 1116 KPDQNNGGRVLPRWS 1130
K D++ R LP WS
Sbjct: 1163 KVDRDGARRTLPSWS 1177
>gi|449457093|ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
gi|449511185|ref|XP_004163888.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
Length = 1269
Score = 1427 bits (3695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/1173 (62%), Positives = 871/1173 (74%), Gaps = 70/1173 (5%)
Query: 1 MTGQIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQ 60
+ Q+QN R+ ++VEKAW+ LS+ QIS R+Y +PG + V+ +D + R S
Sbjct: 124 LACQMQNLQRIQRSQVEKAWNALSNFQISCRHYAKPGNTRQVKDVFSDHPADTGRITS-N 182
Query: 61 SSSDGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKASV 120
S SD + S + S+ + + +P+ + S+N++ + G N +
Sbjct: 183 SLSDANASSHHKKVHRNFSEYSVDTTKPSSFGSNLSASSNIQVMEGQNDVDGNNMARLRT 242
Query: 121 VANAHFKFSDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHY-HSSCTPK 179
+ N+HF+ DG T I + L + +DD+I+E IDVDQIV ++ S+CTP+
Sbjct: 243 INNSHFQRVDGSVIFATNQKNI--CSSFLED--EDDKIIENIDVDQIVEQYQSQSACTPQ 298
Query: 180 PSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAI 239
PS+S+LP ITP D ARQ+E+ P ELC+ C+HG K+ LCPE SSH+Q++KD LI+I
Sbjct: 299 PSVSKLPPITPIIEKDNVARQEESNYPDELCTNCSHGFKIELCPEASSHLQELKDRLISI 358
Query: 240 SNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQA----EERQKSHFSASTT--RT 293
SN+LLDN NLSP Q +KLRQER+ L+KQIQLLE + EER++SH A+T +T
Sbjct: 359 SNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHISLDAVNEERRRSHLFATTVTPKT 418
Query: 294 YQYETPQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREPFI 353
+ +ETP + D + VH E WNS S+ +R G+SS PVEREP+I
Sbjct: 419 FHFETPPGVEFRTDAKLNTSYVHQDFEPRRIEPWNSMGSSYVD-ERFGMSSGPVEREPYI 477
Query: 354 PKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFV 413
PK+I VNYIEGSND+KWSS +F WTK+LEANNKKVFGNHSFRPNQRE+INATMSG+DVFV
Sbjct: 478 PKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGYDVFV 537
Query: 414 LMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQ 473
LMPTGGGKSLTYQLPALICPG+TLVISPLVSLIQDQIMHL+QANI A +LS NMEW+EQQ
Sbjct: 538 LMPTGGGKSLTYQLPALICPGVTLVISPLVSLIQDQIMHLIQANISAAYLSANMEWSEQQ 597
Query: 474 EILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDF 533
EI R+L+SD KYKLLYVTPEKVAKSDVLLR LESLNAR LLARIVIDEAHCVSQWGHDF
Sbjct: 598 EIFRDLSSDCSKYKLLYVTPEKVAKSDVLLRHLESLNARHLLARIVIDEAHCVSQWGHDF 657
Query: 534 RPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW---- 589
RPDYQGLGILKQKFP PVLALTATATASVKEDVVQALGL+NCIIFRQSFNRPNLW
Sbjct: 658 RPDYQGLGILKQKFPKIPVLALTATATASVKEDVVQALGLINCIIFRQSFNRPNLWYSVI 717
Query: 590 ------------------------------MDCEKVAERLQVGLSYGHFFLLKEFYVVSL 619
MDCEKVAERLQ
Sbjct: 718 PKTKKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERLQ------------------- 758
Query: 620 ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSI 679
ECGHKAAFYHGS+DPAQR+F+QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSI
Sbjct: 759 ECGHKAAFYHGSMDPAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSI 818
Query: 680 EGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRV 739
EGYHQECGRAGRDG RSSCVLYYSYSD+IRVKHMISQG EQSP G+NR N+ +SGR+
Sbjct: 819 EGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRI 878
Query: 740 LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDT 799
LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD +CKKTCDNC K + IEKDVTD
Sbjct: 879 LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDI 938
Query: 800 AKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRH 859
+K+LV+LV+ GQQFSS+HILEV+RGSL+Q+VKKHRHE LSLHG GKHL KSEASRIL H
Sbjct: 939 SKQLVDLVRSMGQQFSSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHH 998
Query: 860 LVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVT 919
LVIED L+EEV+KSD+YGSVSS+LKVN++K +L+ G Q + LRFPS+ + KLSK ++T
Sbjct: 999 LVIEDILVEEVRKSDIYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMT 1058
Query: 920 PAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFG 979
PAKGSL+SGK+ P+ DTP+QPQ+EVD+ LSA+LYSSLRMLRT LVKEA +GVMAYHIFG
Sbjct: 1059 PAKGSLVSGKMYPNI-DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFG 1117
Query: 980 NATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDS 1039
NATLQ +S+RVPR++EELL+INGIGKAKVSKYG R+LETIESTIKEFY KNGS+SNDS
Sbjct: 1118 NATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDS 1177
Query: 1040 NDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVDD- 1098
NDSGKRRR N+ + D++D TKS RSKKRA+ QNK V N + P+ + D
Sbjct: 1178 NDSGKRRRGGNKDKDEYL-DENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDS 1236
Query: 1099 -LDFDEYEYVYEMNGSTTKPDQNNGGRVLPRWS 1130
LDFD+ Y D N GRVLP WS
Sbjct: 1237 ELDFDDSHYEIRDLELNNNLDHGNDGRVLPSWS 1269
>gi|356528815|ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1160
Score = 1379 bits (3570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/1056 (68%), Positives = 806/1056 (76%), Gaps = 74/1056 (7%)
Query: 120 VVANAHFKFSDGF-GNHTTEAGQIDESAEVLA--NKIDDDEILETIDVDQIVMEHYHSSC 176
+V N + DG NHT GQI +S+ +A DDD IL IDVDQIV EH S+C
Sbjct: 132 IVNNHSSRGLDGLVNNHTNYTGQIIKSSNCMAVDIDDDDDAILANIDVDQIVEEH-QSTC 190
Query: 177 TPKPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDML 236
TPKPSIS+ P ITP A D FARQ + LPPELC C HG KLG CPE +SH+Q+MKD L
Sbjct: 191 TPKPSISKFPPITPTADKDNFARQGDNVLPPELCLDCIHGYKLGFCPEAASHLQEMKDNL 250
Query: 237 IAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQA----EERQKSHFSASTT- 291
IAISNELLDN NL+ Q KLR +R QL+KQIQ LE Y + EERQKSHFSAST
Sbjct: 251 IAISNELLDNGENLNSTQIAKLRHDRSQLNKQIQQLEKYIHSGNLNEERQKSHFSASTAP 310
Query: 292 -RTYQYETPQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVERE 350
++ YETPQ VL R+DTQ ++ NE+ YG+ S SFS VD + V RE
Sbjct: 311 PTSFVYETPQQTVLCNGSKRYDTQAYMGNET--YGSSFQSLPSFS-VDNCNMPLGSVGRE 367
Query: 351 PFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHD 410
FIPKII+VNYIEGS D++WSS+DFPWTK+LE NNKKVFGNHSFRPNQREIINA+MSG D
Sbjct: 368 AFIPKIIEVNYIEGSGDKRWSSYDFPWTKELEVNNKKVFGNHSFRPNQREIINASMSGCD 427
Query: 411 VFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWT 470
VFVLMPTGGGKSLTYQLPALI PGITLVISPLVSLIQDQIMHLLQANIPA +LS NMEW
Sbjct: 428 VFVLMPTGGGKSLTYQLPALIRPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWA 487
Query: 471 EQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWG 530
EQQEILRELNSDYCKYKLLYVTPEKVA+SD LLR L++L+ RELLARIVIDEAHCVSQWG
Sbjct: 488 EQQEILRELNSDYCKYKLLYVTPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWG 547
Query: 531 HDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW- 589
HDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW
Sbjct: 548 HDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWY 607
Query: 590 ---------------------------------MDCEKVAERLQVGLSYGHFFLLKEFYV 616
MDCEKVAE+LQ
Sbjct: 608 SVVPKTKKCLEDIDKFIRVNHFDECGIIYCLSRMDCEKVAEKLQ---------------- 651
Query: 617 VSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLP 676
ECGHK AFYHGS+DPAQRA VQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLP
Sbjct: 652 ---ECGHKCAFYHGSMDPAQRASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLP 708
Query: 677 KSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANS 736
KSIEGYHQECGRAGRDGQRSSC+LYY+YSD+IRVKHM+SQG EQS T G+NR N+ NS
Sbjct: 709 KSIEGYHQECGRAGRDGQRSSCILYYNYSDYIRVKHMLSQGAIEQSSMTSGYNRSNMINS 768
Query: 737 GRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDV 796
GR+LETNTENL+RMVSYCENDVDCRRLLQL HFGEKF+S+ C+KTCDNC KI SFIEKDV
Sbjct: 769 GRILETNTENLVRMVSYCENDVDCRRLLQLAHFGEKFNSSTCQKTCDNCLKITSFIEKDV 828
Query: 797 TDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRI 856
T+ A +LVELVKLTGQ+FSSSHILEV+RGSL+Q VKKHRHET+SLHGAGKHLAK EASRI
Sbjct: 829 TEIANQLVELVKLTGQRFSSSHILEVYRGSLSQMVKKHRHETVSLHGAGKHLAKGEASRI 888
Query: 857 LRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKS 916
L HLV+EDFL EEVKKSD YGSVSS+LKVN+ K NL G Q ++LRFPS++ ++K KS
Sbjct: 889 LHHLVVEDFLGEEVKKSDFYGSVSSILKVNEPKVRNLFAG-QRIILRFPSSVKASKPGKS 947
Query: 917 DVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYH 976
D TPAKGSL S KL+ + D PS PQ EVD LSAKLY++LR+LR LV EAGEGVM +H
Sbjct: 948 DATPAKGSLTSEKLNVMQIDPPS-PQTEVDHILSAKLYNALRLLRKSLVTEAGEGVMPHH 1006
Query: 977 IFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSS 1036
IFGNATL +SKRVPRT+EELL+INGIGKAKVSKYG +LLETIE T+ E YK D GS S
Sbjct: 1007 IFGNATLLLISKRVPRTKEELLDINGIGKAKVSKYGDQLLETIEKTVNEHYKLDNIGSGS 1066
Query: 1037 NDSNDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYE-C 1095
S DS K+RR N + N DDD TKST RSKKR K QN+ + + E D ++ C
Sbjct: 1067 KGSADSTKKRRVPNGNSDTNVEDDDAPTKSTGRSKKRTVKRQNRKGVIYDSPEEDYFQGC 1126
Query: 1096 VD-DLDFDEYEYVYEMNGSTTKPDQNNGGRVLPRWS 1130
D DLDFD + E++ +N GRVLP+W+
Sbjct: 1127 PDEDLDFD----IIEIDALDQVTCKNTAGRVLPQWT 1158
>gi|356541884|ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1534
Score = 1370 bits (3546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 739/1166 (63%), Positives = 837/1166 (71%), Gaps = 133/1166 (11%)
Query: 14 AEVEKAWHTLSSLQISRRNYIRPGLS--TPVEHSDNDASHNVSRRASLQSSSDGSKFSEP 71
+VEKA SSLQ S RNY++PG + TP H D
Sbjct: 451 VQVEKALAAHSSLQNSSRNYVQPGKTQVTPQLHED------------------------- 485
Query: 72 MNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKASVVANAH-FKFSD 130
R T SFH G G ++ A+ + N H + D
Sbjct: 486 ------------------RRTTSFH-------GGYENGNHRCPDVAATPIVNNHNSRGLD 520
Query: 131 G-FGNHTTEAGQIDESAEVLANKIDDDE-ILETIDVDQIVMEHYHSSCTPKPSISRLPSI 188
G NHT GQI++S+ +A IDDD+ + + IDVDQIV ++ CTPKPSIS+LP I
Sbjct: 521 GSVNNHTNYTGQINKSSNCMAVDIDDDDSLFKNIDVDQIVEDY----CTPKPSISKLPPI 576
Query: 189 TPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAISNELLDNAT 248
TP A D FARQ + LPPELC C HG LG CPE +SH+QDMKD LIAI NELLDN
Sbjct: 577 TPTADKDNFARQGDDVLPPELCLDCVHGYMLGFCPEAASHLQDMKDNLIAIFNELLDNGE 636
Query: 249 NLSPAQTEKLRQERLQLSKQIQLLEGYRQA----EERQKSHFSASTT--RTYQYETPQPA 302
NL+ Q KLR +R QL+KQIQ LE Y + EERQKSHFSAST ++ YETPQ
Sbjct: 637 NLNSTQIAKLRHDRSQLNKQIQQLEKYIHSGNLNEERQKSHFSASTAPPTSFVYETPQQT 696
Query: 303 VLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFS--SVDRLGVSSYPVEREPFIPKIIKVN 360
VL R+DT+ ++ G G + SS S SVD + S V RE FIPKII+VN
Sbjct: 697 VLCNGSKRYDTEAYM-----GNGTYGSSFQSLPPFSVDNCSMPSGSVGREVFIPKIIEVN 751
Query: 361 YIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGG 420
YIEGS D++WSS+DF WTK+LE NNKKVFGNHSFRPNQREIINA+MSG DVFVLMPTGGG
Sbjct: 752 YIEGSGDKRWSSYDFSWTKELEVNNKKVFGNHSFRPNQREIINASMSGCDVFVLMPTGGG 811
Query: 421 KSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELN 480
KSLTYQLPALI PGITLVISPLVSLIQDQIMHLLQANIPA +LS NMEWTEQQ+ILRELN
Sbjct: 812 KSLTYQLPALIHPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTEQQDILRELN 871
Query: 481 SDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL 540
SDYCKYKLLYVTPEKVA+SD LLR L++L+ RELLARIVIDEAHCVSQWGHDFRPDYQGL
Sbjct: 872 SDYCKYKLLYVTPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWGHDFRPDYQGL 931
Query: 541 GILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL------------ 588
GILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL
Sbjct: 932 GILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLRYSVIPKTKKCL 991
Query: 589 ----------------------WMDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAA 626
MDCEKVAE+LQ ECGHK A
Sbjct: 992 EDIDKFIRENHFDECGIVYCLSRMDCEKVAEKLQ-------------------ECGHKCA 1032
Query: 627 FYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQEC 686
FYHGS+DP QRA VQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQEC
Sbjct: 1033 FYHGSMDPVQRASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQEC 1092
Query: 687 GRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTEN 746
GRAGRDGQ SSCVLYY+YSD+IRVKHM+SQG EQS T G+NR N+ NSGR+LETNTEN
Sbjct: 1093 GRAGRDGQHSSCVLYYTYSDYIRVKHMLSQGAIEQSSMTSGYNRSNMINSGRILETNTEN 1152
Query: 747 LLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVEL 806
L+RMVSYCENDVDCRRLLQL HFGEKF+S+ C KTCDNC KI SFIEKDVT+ AK+LVEL
Sbjct: 1153 LVRMVSYCENDVDCRRLLQLAHFGEKFNSSTCLKTCDNCLKITSFIEKDVTEIAKQLVEL 1212
Query: 807 VKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFL 866
VKLTGQ+FSSSHILEV+RGSL+Q VKKHRHE++SLHGAGKHLAK EASRIL HLV+EDFL
Sbjct: 1213 VKLTGQRFSSSHILEVYRGSLSQMVKKHRHESVSLHGAGKHLAKGEASRILHHLVVEDFL 1272
Query: 867 MEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLL 926
EEVKKSD YGSVSS+LKVN+ K HNL G Q ++LRFPS + ++K KSD TPAKGSL
Sbjct: 1273 WEEVKKSDFYGSVSSILKVNEPKIHNLFAG-QRIILRFPSLVKASKPGKSDATPAKGSLT 1331
Query: 927 SGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHL 986
SGKL+ + D PS PQ EVD LSAKLY++LR+LR LV EAG+GVM +HIFGNATL +
Sbjct: 1332 SGKLNVMQIDPPS-PQTEVDDILSAKLYNALRLLRKSLVTEAGDGVMPHHIFGNATLLLI 1390
Query: 987 SKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRR 1046
SKRVPR +EELL+INGIGKAKVSKYG +LLE+IE TI E YK DK S S S+DS K+R
Sbjct: 1391 SKRVPRRKEELLDINGIGKAKVSKYGDQLLESIEKTINEHYKLDKVSSGSKGSSDSTKKR 1450
Query: 1047 RDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYE-CVD-DLDFDEY 1104
R N P+AN DDD TKST RSKKR K QN+ + + E D ++ C D DLDFD
Sbjct: 1451 RLSNGNPDANAEDDDAPTKSTGRSKKRMVKRQNRKAVIYDSPEEDYFQGCPDEDLDFD-- 1508
Query: 1105 EYVYEMNGSTTKPDQNNGGRVLPRWS 1130
+ E++ +N GRVLP+W+
Sbjct: 1509 --IIEIDALDQVTCKNAAGRVLPQWT 1532
>gi|357445423|ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
gi|355482037|gb|AES63240.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
Length = 1156
Score = 1348 bits (3489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/1186 (60%), Positives = 828/1186 (69%), Gaps = 151/1186 (12%)
Query: 4 QIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSS 63
Q QN A+V+KAW LS LQ+S R+Y+ G S V H S Q S
Sbjct: 61 QGQNVQSSQRAQVDKAWSALSRLQLSSRSYVPIGKSVKV----TPQFHENRTTTSFQGSY 116
Query: 64 DGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKASVVAN 123
+ +K + P D A V N
Sbjct: 117 ENNKLNHP-------------------------------DVAA-----------TPTVIN 134
Query: 124 AHFKFSDGF-GNHTTEAGQIDESAEVLANKIDDDEI--LETIDVDQIVMEHYHSSCTPKP 180
+ D NHT GQ +ES + +A+ I+ D+ LE++D+DQIV E Y S+CTP+P
Sbjct: 135 HTSRVVDSLVNNHTKYTGQTNESTKCVADTINIDDDDILESMDLDQIV-EKYQSTCTPQP 193
Query: 181 SISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAIS 240
+S+ P TP A D FA Q +T LPPELC C HG KLG+CPE +SH+Q+ KD LIAIS
Sbjct: 194 PMSKFPPFTPTADKDNFAGQGDTFLPPELCLNCIHGYKLGICPEAASHLQEFKDNLIAIS 253
Query: 241 NELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQA----EERQKSHF--SASTTRTY 294
NEL+DN NLS Q KLRQ+R QL+ QIQ LE Y + EERQKS+F S + ++
Sbjct: 254 NELIDNVENLSSVQIAKLRQDRSQLNNQIQQLEKYIHSSNLEEERQKSNFVTSMAPPTSF 313
Query: 295 QYETPQPAVLKIDPI------RFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVE 348
YETPQ V+ P+ R+D QV++ YG + +S S G+ S PVE
Sbjct: 314 VYETPQRNVISSGPVISSGLNRYDDQVYM-----DYGTYGTSYQS-----SCGMPSGPVE 363
Query: 349 REPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSG 408
REPFIPKII+VNYIEGS D++WSS DF WTK+LE NNKKVFGNHSFRPNQRE+INATMSG
Sbjct: 364 REPFIPKIIEVNYIEGSGDKRWSSRDFSWTKELEVNNKKVFGNHSFRPNQREVINATMSG 423
Query: 409 HDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNME 468
DVFVLMPTGGGKSLTYQLPALI PGITLVISPLVSLIQDQIMHLLQANIPA +LS N+E
Sbjct: 424 CDVFVLMPTGGGKSLTYQLPALINPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANLE 483
Query: 469 WTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQ 528
W EQQEILRELNSDYCKYKLLYVTPEKVA+SDVLLRQLESL+ RELL+RIVIDEAHCVSQ
Sbjct: 484 WAEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLESLHGRELLSRIVIDEAHCVSQ 543
Query: 529 WGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL 588
WGHDFRPDYQGLG+LKQKFPNTPVLALTATATASVKEDVVQALGLVNC++FRQSFNRPNL
Sbjct: 544 WGHDFRPDYQGLGVLKQKFPNTPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNL 603
Query: 589 W----------------------------------MDCEKVAERLQVGLSYGHFFLLKEF 614
W MDCEKVAE+LQ
Sbjct: 604 WYSVVPKTKKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQ-------------- 649
Query: 615 YVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
ECGHK AFYHGS+DP QRA VQ+QWSKDEINIICATVAFGMGINKPDVRFVIHHS
Sbjct: 650 -----ECGHKCAFYHGSMDPDQRAHVQRQWSKDEINIICATVAFGMGINKPDVRFVIHHS 704
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
LPKS+EGYHQECGRAGRDGQRSSC IRVKHM+S G EQS T G++RFN
Sbjct: 705 LPKSVEGYHQECGRAGRDGQRSSC---------IRVKHMLSVGAVEQSNMTSGYSRFNAT 755
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEK 794
NSGR+LETNTENLLRMVSYCENDVDCRRL+QLVHFGEKFDS++C KTCDNC KI SF+EK
Sbjct: 756 NSGRLLETNTENLLRMVSYCENDVDCRRLIQLVHFGEKFDSSNCHKTCDNCVKITSFVEK 815
Query: 795 DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEAS 854
DVT+ AK+LVELVKLTGQ+ S+SHILEV+RGSL+Q VKKHRHET+ LHGAGKHLAK EAS
Sbjct: 816 DVTEIAKQLVELVKLTGQKVSASHILEVYRGSLSQMVKKHRHETVRLHGAGKHLAKGEAS 875
Query: 855 RILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR------FPSAI 908
RIL HLV+EDF+ E VKKSD YGSVSSVLKVN+ K N++ G Q ++LR FPS++
Sbjct: 876 RILHHLVVEDFIAEVVKKSDFYGSVSSVLKVNEQKVRNMLFGGQRIILRFALPIKFPSSV 935
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
++K K D AKGSL S KL+ D P QP+ E+DL+LSAKLY++LRMLRT L +EA
Sbjct: 936 KASKPGKCDSISAKGSLASAKLNLPI-DIPDQPETEIDLDLSAKLYTALRMLRTTLCREA 994
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYK 1028
GEGVMA+HIFGNATLQ +SK++PRT+EELL+INGI K KVSKYG RLLETI TI E+Y
Sbjct: 995 GEGVMAHHIFGNATLQQISKKLPRTKEELLDINGISKTKVSKYGDRLLETIAKTINEYYN 1054
Query: 1029 TDKNGSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHN 1088
TDKN S S S DS KRRR+ N P++N DDD KST RSKKR K Q K E+
Sbjct: 1055 TDKNSSGSKGSVDSAKRRREANRTPDSNGEDDDALIKSTGRSKKRTVKRQIKKAEIYESE 1114
Query: 1089 EPDSYE-CVD-DLDFDEYEYVY--EMNGSTTKPDQNNGGRVLPRWS 1130
E D Y C+D DLD + + V ++ G+ N GRVLP+W+
Sbjct: 1115 EEDYYHGCLDEDLDCIDIDNVVLDKLTGT------NAAGRVLPQWT 1154
>gi|297849458|ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
gi|297338452|gb|EFH68869.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
Length = 1189
Score = 1324 bits (3427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/1176 (60%), Positives = 840/1176 (71%), Gaps = 102/1176 (8%)
Query: 7 NFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQ--SSSD 64
N L ++ KAW LSSL I+ Y+RPG++ P++ + S++ ++++ SS+
Sbjct: 63 NVHTLAHPQISKAWRALSSLSINNA-YLRPGVTPPIDDGGTNGSYSAREGSTVKVISSTG 121
Query: 65 GSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAG-AGKGLRGQNEIKASVVAN 123
GS +S N Q NV+ R SF S D A K G +E++ S +
Sbjct: 122 GSVYSSSRQN-----QNAMNVSGTGRSFHSFPSSVLGADKMIAEKFPLGNDEVRESEPSF 176
Query: 124 AHFK-FSDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKPSI 182
H F N Q ES + +DDD+IL+ IDVDQIVMEHYHS+ TP+PS+
Sbjct: 177 THLNGVEKSFRNSAFPPEQF-ESGKACLGDMDDDDILKNIDVDQIVMEHYHSTSTPQPSV 235
Query: 183 SRLPSITPNAG--NDKFARQDETC-LPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAI 239
S TP A + +R +E C LPPELCS C+HG KLGLCPE S+H++ MKD+L+AI
Sbjct: 236 SNFSLRTPPAPPVDRSASRLEEECYLPPELCSNCSHGIKLGLCPEASTHVEQMKDVLLAI 295
Query: 240 SNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSAST-TRTYQYET 298
SNELLD+A +LSP + E+LRQERLQL KQIQ LE + + +ERQKS FS+ST TRT+QYET
Sbjct: 296 SNELLDDAADLSPYRVEQLRQERLQLKKQIQQLENHIRDKERQKSQFSSSTATRTFQYET 355
Query: 299 PQPAVLKIDPIRFDTQVHLYNESEGYGN-WNSSSVSFSSVDRLGVSSYPVEREPFIPKII 357
P+ K+D + D + HL ++ G+ WN+ S SVDR G+S+ PVEREP++PKII
Sbjct: 356 PKSTNYKMDQPQTDFRAHLSDQGRYAGDSWNTPRDSSFSVDRYGLSTAPVEREPYVPKII 415
Query: 358 KVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPT 417
V Y EGSND+KWSS +FPWT+KLE NNKKVFGNHSFRPNQREIINATMSG DVFVLMPT
Sbjct: 416 DVTYTEGSNDKKWSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPT 475
Query: 418 GGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILR 477
GGGKSLTYQLPALIC GITLVISPLVSLIQDQIM+LLQANIPA LS MEW EQ +I +
Sbjct: 476 GGGKSLTYQLPALICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQ 535
Query: 478 ELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDY 537
ELNS++ KYKLLYVTPEKVAKSD LLR LE+LN+R LLAR VIDEAHCVSQWGHDFRPDY
Sbjct: 536 ELNSEHSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDY 595
Query: 538 QGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW-------- 589
Q LGILKQKFPN PVLALTATATASVKEDVVQALGLVNC++FRQSFNRPNLW
Sbjct: 596 QSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTK 655
Query: 590 --------------------------MDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGH 623
MDCEKV+ERLQ E GH
Sbjct: 656 KCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQ-------------------EFGH 696
Query: 624 KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYH 683
K AFYHGS++P QRAF+Q QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYH
Sbjct: 697 KTAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYH 756
Query: 684 QECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETN 743
QECGRAGRDGQRSSCVLYY Y D+IRVKHMISQG +QSP G+NR VA+ GR+LETN
Sbjct: 757 QECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNR--VASLGRILETN 814
Query: 744 TENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKL 803
TENLLRMVSYCEN+V+CRR LQLVHFGEKFDS +CKKTCDNC +S I+KDVT ++L
Sbjct: 815 TENLLRMVSYCENEVECRRFLQLVHFGEKFDSTNCKKTCDNCCSSQSLIDKDVTLITRQL 874
Query: 804 VELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIE 863
VELVK TG++FSS+HILEV+RGSLNQ VKKHRHETL LHG GKHL+K E SRIL +LV E
Sbjct: 875 VELVKQTGERFSSAHILEVYRGSLNQMVKKHRHETLQLHGVGKHLSKIEVSRILHYLVTE 934
Query: 864 DFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKG 923
D L+E+V+KSD+YGSVSS+LKVN +KA L G Q ++++FPS++ K SK T AKG
Sbjct: 935 DILVEDVRKSDMYGSVSSLLKVNNAKATLLFSGSQTIMMKFPSSVKVLKPSKQGATAAKG 994
Query: 924 SLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATL 983
L S K S T P DLNLSA +Y++LR LRT LVKEA +GVMAYHIF N+TL
Sbjct: 995 PLTSEKQSTLPLTTEDAPPK--DLNLSANMYTALRKLRTALVKEAPDGVMAYHIFINSTL 1052
Query: 984 QHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGS-SSNDSNDS 1042
Q +S+R+PRT+EELLEING+GKAKVSKYG RLLETIE+T+ E+Y T+K S SNDS DS
Sbjct: 1053 QQISRRIPRTKEELLEINGLGKAKVSKYGDRLLETIETTVNEYYGTNKKDSIISNDSPDS 1112
Query: 1043 GKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVD----- 1097
GKRRRDEN +PN +DDDF S ++S K+ + NK+ EV++ ECVD
Sbjct: 1113 GKRRRDENISPNV--AEDDDFEVSPSQSCKKTVR--NKSNEVLHG------ECVDGDRRG 1162
Query: 1098 ----DLDFDEYEYVYEMNGSTTKPDQNNGGRVLPRW 1129
LDFD + + S +P+ GRVLP W
Sbjct: 1163 MVMEKLDFD----FRDEDVSEIRPE----GRVLP-W 1189
>gi|30681987|ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
gi|75329797|sp|Q8L840.1|RQL4A_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4A; AltName:
Full=RecQ-like protein 4A; Short=AtRecQ4A;
Short=AtRecQl4A; AltName: Full=SGS1-like protein;
Short=AtSGS1
gi|21539533|gb|AAM53319.1| DNA helicase isolog [Arabidopsis thaliana]
gi|33589672|gb|AAQ22602.1| At1g10930 [Arabidopsis thaliana]
gi|332190544|gb|AEE28665.1| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
Length = 1188
Score = 1310 bits (3390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/1169 (60%), Positives = 834/1169 (71%), Gaps = 95/1169 (8%)
Query: 7 NFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRR-ASLQSSSDG 65
N L ++ KAW LSSL ++ Y+RPG++ P++ ND+ R A + SS+ G
Sbjct: 69 NVHTLAHPQISKAWRALSSLSVNN-TYLRPGVTPPIDVGTNDSYSARERSTAKVISSTGG 127
Query: 66 SKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDA-GAGKGLRGQNEIKASVVANA 124
S +S N NV+ R SF S D A K RG NEI+ S +
Sbjct: 128 SVYSSTRPNLSA-----MNVSGTGRSFHSFPSSVPGDDKIVAEKFPRGNNEIRESEPSCT 182
Query: 125 HFK-FSDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKPSIS 183
H FGN A Q ES + + +DDD+ILE IDVDQIVMEHYHS+ TP+PS+S
Sbjct: 183 HLNGVEKSFGNSAFPAEQF-ESRKACLDDMDDDDILENIDVDQIVMEHYHSTSTPQPSVS 241
Query: 184 RLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAISNEL 243
TP ++E LPPELCS C+HG KLGLCPE S+H++ MKD+L+AISNEL
Sbjct: 242 NFSLRTPPVDRSASRLEEECNLPPELCSNCSHGIKLGLCPEASTHVEQMKDVLLAISNEL 301
Query: 244 LDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSAST-TRTYQYETPQPA 302
LD+AT+LSP + +LRQERL+L KQIQ LE + + +E QKS F +ST TR +QYETP+
Sbjct: 302 LDDATDLSPDRVGQLRQERLRLKKQIQQLENHIRDKESQKSQFLSSTATRIFQYETPKST 361
Query: 303 VLKIDPIRFDTQVHLYNESE-GYGNWNSSSVSFSSVDRLGVSSYPVEREPFIPKIIKVNY 361
K+D + D + H+ ++ +WN+ S SVDR G+SS PVERE ++PKII V Y
Sbjct: 362 NYKMDQPQTDFRAHVSDQGRYACDSWNTPRDSSFSVDRYGLSSAPVEREQYVPKIIDVTY 421
Query: 362 IEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGK 421
EGSND+KWSS +FPWT+KLE NNKKVFGNHSFRPNQREIINATMSG DVFVLMPTGGGK
Sbjct: 422 TEGSNDKKWSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGK 481
Query: 422 SLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS 481
SLTYQLPALIC GITLVISPLVSLIQDQIM+LLQANIPA LS MEW EQ +I +ELNS
Sbjct: 482 SLTYQLPALICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNS 541
Query: 482 DYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLG 541
++ KYKLLYVTPEKVAKSD LLR LE+LN+R LLAR VIDEAHCVSQWGHDFRPDYQ LG
Sbjct: 542 EHSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLG 601
Query: 542 ILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW------------ 589
ILKQKFPN PVLALTATATASVKEDVVQALGLVNC++FRQSFNRPNLW
Sbjct: 602 ILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLE 661
Query: 590 ----------------------MDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAF 627
MDCEKV+ERLQ E GHKAAF
Sbjct: 662 DIDKFIKENHFDECGIIYCLSRMDCEKVSERLQ-------------------EFGHKAAF 702
Query: 628 YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 687
YHGS++P QRAF+Q QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG
Sbjct: 703 YHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 762
Query: 688 RAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENL 747
RAGRDGQRSSCVLYY Y D+IRVKHMISQG +QSP G+NR VA+SGR+LETNTENL
Sbjct: 763 RAGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNR--VASSGRLLETNTENL 820
Query: 748 LRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV 807
LRMV YCEN+V+CRR LQLVH GEKFDS +CKKTCDNC +S I+KDVT ++LVELV
Sbjct: 821 LRMVRYCENEVECRRFLQLVHLGEKFDSTNCKKTCDNCCSSQSLIDKDVTLITRQLVELV 880
Query: 808 KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLM 867
K TG++FSS+HILEV+RGSLNQ VKKHRHETL HGAGKHL+K E SRIL +LV ED L+
Sbjct: 881 KQTGERFSSAHILEVYRGSLNQMVKKHRHETLQFHGAGKHLSKIEVSRILHYLVTEDILV 940
Query: 868 EEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLS 927
E+V+KSD+YGSVSS+L+VN +KA L G Q +V++FPS++ K SK T AKG L S
Sbjct: 941 EDVRKSDMYGSVSSLLQVNNAKATILFSGSQTIVMKFPSSVKVLKPSKQGATAAKGPLTS 1000
Query: 928 GKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLS 987
K S T P D+NLSA +Y++LR LRT LVKEA +GVMAYHIF N+TLQ +S
Sbjct: 1001 EKQSTLPLTTEDAPPK--DVNLSANMYTALRKLRTALVKEAPDGVMAYHIFINSTLQQIS 1058
Query: 988 KRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGS-SSNDSNDSGKRR 1046
+R+PRT+EELLEING+GKAKVSKYG +LLETIE+T+ E+Y T+K S SNDS DSGKRR
Sbjct: 1059 RRIPRTKEELLEINGLGKAKVSKYGDQLLETIETTVNEYYGTNKKDSIISNDSPDSGKRR 1118
Query: 1047 RDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVD------DLD 1100
RDEN +PN +DDDF S ++S K+ + NK+ EV++ EC+D +LD
Sbjct: 1119 RDENISPNV--AEDDDFEVSPSQSCKKTVR--NKSNEVLHG------ECIDGDRRGMELD 1168
Query: 1101 FDEYEYVYEMNGSTTKPDQNNGGRVLPRW 1129
FD + +GS +P+ GRVLP W
Sbjct: 1169 FD----FKDEDGSEIRPE----GRVLP-W 1188
>gi|11121449|emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana]
Length = 1182
Score = 1310 bits (3389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/1169 (60%), Positives = 834/1169 (71%), Gaps = 95/1169 (8%)
Query: 7 NFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRR-ASLQSSSDG 65
N L ++ KAW LSSL ++ Y+RPG++ P++ ND+ R A + SS+ G
Sbjct: 63 NVHTLAHPQISKAWRALSSLSVNN-TYLRPGVTPPIDVGTNDSYSARERSTAKVISSTGG 121
Query: 66 SKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDA-GAGKGLRGQNEIKASVVANA 124
S +S N NV+ R SF S D A K RG NEI+ S +
Sbjct: 122 SVYSSTRPNLSA-----MNVSGTGRSFHSFPSSVPGDDKIVAEKFPRGNNEIRESEPSCT 176
Query: 125 HFK-FSDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKPSIS 183
H FGN A Q ES + + +DDD+ILE IDVDQIVMEHYHS+ TP+PS+S
Sbjct: 177 HLNGVEKSFGNSAFPAEQF-ESRKACLDDMDDDDILENIDVDQIVMEHYHSTSTPQPSVS 235
Query: 184 RLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAISNEL 243
TP ++E LPPELCS C+HG KLGLCPE S+H++ MKD+L+AISNEL
Sbjct: 236 NFSLRTPPVDRSASRLEEECNLPPELCSNCSHGIKLGLCPEASTHVEQMKDVLLAISNEL 295
Query: 244 LDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSAST-TRTYQYETPQPA 302
LD+AT+LSP + +LRQERL+L KQIQ LE + + +E QKS F +ST TR +QYETP+
Sbjct: 296 LDDATDLSPDRVGQLRQERLRLKKQIQQLENHIRDKESQKSQFLSSTATRIFQYETPKST 355
Query: 303 VLKIDPIRFDTQVHLYNESE-GYGNWNSSSVSFSSVDRLGVSSYPVEREPFIPKIIKVNY 361
K+D + D + H+ ++ +WN+ S SVDR G+SS PVERE ++PKII V Y
Sbjct: 356 NYKMDQPQTDFRAHVSDQGRYACDSWNTPRDSSFSVDRYGLSSAPVEREQYVPKIIDVTY 415
Query: 362 IEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGK 421
EGSND+KWSS +FPWT+KLE NNKKVFGNHSFRPNQREIINATMSG DVFVLMPTGGGK
Sbjct: 416 TEGSNDKKWSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGK 475
Query: 422 SLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS 481
SLTYQLPALIC GITLVISPLVSLIQDQIM+LLQANIPA LS MEW EQ +I +ELNS
Sbjct: 476 SLTYQLPALICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNS 535
Query: 482 DYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLG 541
++ KYKLLYVTPEKVAKSD LLR LE+LN+R LLAR VIDEAHCVSQWGHDFRPDYQ LG
Sbjct: 536 EHSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLG 595
Query: 542 ILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW------------ 589
ILKQKFPN PVLALTATATASVKEDVVQALGLVNC++FRQSFNRPNLW
Sbjct: 596 ILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLE 655
Query: 590 ----------------------MDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAF 627
MDCEKV+ERLQ E GHKAAF
Sbjct: 656 DIDKFIKENHFDECGIIYCLSRMDCEKVSERLQ-------------------EFGHKAAF 696
Query: 628 YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 687
YHGS++P QRAF+Q QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG
Sbjct: 697 YHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 756
Query: 688 RAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENL 747
RAGRDGQRSSCVLYY Y D+IRVKHMISQG +QSP G+NR VA+SGR+LETNTENL
Sbjct: 757 RAGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNR--VASSGRLLETNTENL 814
Query: 748 LRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV 807
LRMV YCEN+V+CRR LQLVH GEKFDS +CKKTCDNC +S I+KDVT ++LVELV
Sbjct: 815 LRMVRYCENEVECRRFLQLVHLGEKFDSTNCKKTCDNCCSSQSLIDKDVTLITRQLVELV 874
Query: 808 KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLM 867
K TG++FSS+HILEV+RGSLNQ VKKHRHETL HGAGKHL+K E SRIL +LV ED L+
Sbjct: 875 KQTGERFSSAHILEVYRGSLNQMVKKHRHETLQFHGAGKHLSKIEVSRILHYLVTEDILV 934
Query: 868 EEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLS 927
E+V+KSD+YGSVSS+L+VN +KA L G Q +V++FPS++ K SK T AKG L S
Sbjct: 935 EDVRKSDMYGSVSSLLQVNNAKATILFSGSQTIVMKFPSSVKVLKPSKQGATAAKGPLTS 994
Query: 928 GKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLS 987
K S T P D+NLSA +Y++LR LRT LVKEA +GVMAYHIF N+TLQ +S
Sbjct: 995 EKQSTLPLTTEDAPPK--DVNLSANMYTALRKLRTALVKEAPDGVMAYHIFINSTLQQIS 1052
Query: 988 KRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGS-SSNDSNDSGKRR 1046
+R+PRT+EELLEING+GKAKVSKYG +LLETIE+T+ E+Y T+K S SNDS DSGKRR
Sbjct: 1053 RRIPRTKEELLEINGLGKAKVSKYGDQLLETIETTVNEYYGTNKKDSIISNDSPDSGKRR 1112
Query: 1047 RDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVD------DLD 1100
RDEN +PN +DDDF S ++S K+ + NK+ EV++ EC+D +LD
Sbjct: 1113 RDENISPNV--AEDDDFEVSPSQSCKKTVR--NKSNEVLHG------ECIDGDRRGMELD 1162
Query: 1101 FDEYEYVYEMNGSTTKPDQNNGGRVLPRW 1129
FD + +GS +P+ GRVLP W
Sbjct: 1163 FD----FKDEDGSEIRPE----GRVLP-W 1182
>gi|334183459|ref|NP_176289.7| RECQ helicase L4B [Arabidopsis thaliana]
gi|75334305|sp|Q9FT70.1|RQL4B_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4B; AltName:
Full=RecQ-like protein 4B; Short=AtRecQ4B;
Short=AtRecQl4B
gi|11121451|emb|CAC14869.1| DNA Helicase [Arabidopsis thaliana]
gi|332195628|gb|AEE33749.1| RECQ helicase L4B [Arabidopsis thaliana]
Length = 1150
Score = 1165 bits (3015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/1095 (57%), Positives = 759/1095 (69%), Gaps = 81/1095 (7%)
Query: 11 LHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSSDGSKFSE 70
L ++EKAW TL +L I+ Y+RPG++ + DND++ S SS+ GS F
Sbjct: 97 LARPQIEKAWCTLINLSINN-TYLRPGITPAI---DNDST-------SRTSSTKGSTFK- 144
Query: 71 PMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLR-------GQNEIKASVVAN 123
+ + GS N E H +VR G K + G N+I V
Sbjct: 145 -VTSNADGSFCAHNHPE--------HSQRSVR--GTAKSIDSFSSSSVGDNKIIIDKVPR 193
Query: 124 AHFKFSDGFG----------NHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYH 173
+++ D ++ + + E EV +ID D+I+E IDVDQI MEH
Sbjct: 194 VNYEVRDSVTVTNGMEMPPIKNSAQLARPVEPREVSLGEIDYDDIMEIIDVDQIAMEHCP 253
Query: 174 SSCTPKPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMK 233
S+CT +PS+S+ I + R++E LPPE+CS C+HG KLGLCPE S+H++ MK
Sbjct: 254 STCTKQPSVSKFVDIFTSR------REEEQGLPPEICSNCSHGIKLGLCPEASTHVEQMK 307
Query: 234 DMLIAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSAST-TR 292
D L+AISNE+LDN +L P E+L Q+RL L KQIQ LE +ER+KS S +
Sbjct: 308 DTLLAISNEILDNTYDLGPDHVEQLHQKRLLLKKQIQQLEILIHNKERKKSQCLVSIPSH 367
Query: 293 TYQYETPQPAVLKIDPIRFDTQVHLYNESEGY-GNWNSSSVSFSSVDRLGVSSYPVEREP 351
QYETPQ L++ + D+ H+ + NWN S +R +SS ERE
Sbjct: 368 NTQYETPQTTNLEVVYGQTDSPTHVKEQGRCVTDNWNMPRDYLVSKERYDISSGSEEREQ 427
Query: 352 FIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDV 411
+ ++I V E SND+KW+S DFPWTK LE NK VFGNHSFRPNQREIINATMSG DV
Sbjct: 428 SVSEVIDVTDTESSNDKKWTSSDFPWTKNLEVYNKLVFGNHSFRPNQREIINATMSGCDV 487
Query: 412 FVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTE 471
FVLMPTGGGKSLTYQLPAL+C GITLVISPLVSLIQDQIM+LLQ NI A LS MEW E
Sbjct: 488 FVLMPTGGGKSLTYQLPALLCAGITLVISPLVSLIQDQIMNLLQTNISAASLSAGMEWAE 547
Query: 472 QQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGH 531
Q EIL+EL+S+ KYKLLYVTPEKVAKS+ LLR LE LN+R LLAR VIDEAHCVSQWGH
Sbjct: 548 QLEILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEILNSRSLLARFVIDEAHCVSQWGH 607
Query: 532 DFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD 591
DFRPDYQGLG+LKQKFPN P+LALTATAT SVKEDVVQALGLVNC++FRQSFNRPNLW
Sbjct: 608 DFRPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYS 667
Query: 592 C----EKVAERLQVGLSYGHFFLLKEFYVVS-LEC----------GHKAAFYHGSIDPAQ 636
K E + + HF Y +S ++C GHKAAFYHGS+DP +
Sbjct: 668 VVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGK 727
Query: 637 RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 696
RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS
Sbjct: 728 RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 787
Query: 697 SCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCEN 756
SCVLYYSY+D+IRVKHMISQG Q G+N A+SGR+LETNTENLLRMVSYCEN
Sbjct: 788 SCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYN--CKASSGRMLETNTENLLRMVSYCEN 845
Query: 757 DVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSS 816
+VDCRR LQLVH GEKFDS +CK TCDNCS K I+KDVT A++LV LVKLTG++FSS
Sbjct: 846 EVDCRRFLQLVHLGEKFDSTNCKNTCDNCSSSKILIDKDVTVIARQLVALVKLTGERFSS 905
Query: 817 SHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVY 876
+HI+E++RGSLNQ VK++R +TL LHGAGKHL KSEASRIL +LV ED L E VKKS++Y
Sbjct: 906 AHIVEIYRGSLNQSVKRNRQDTLHLHGAGKHLTKSEASRILHYLVTEDILAEGVKKSELY 965
Query: 877 GSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRND 936
GSVSS+LKVN+SKA +L+ G Q++ +RFPS I +K SKS PAK L L ++
Sbjct: 966 GSVSSLLKVNRSKAASLLSGGQSITMRFPSTIKVSKQSKSTANPAKVPLKQTTLPMAK-- 1023
Query: 937 TPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEE 996
+ PQ D NLS L ++L+ LRT +VKE+ + VMAYHIFGNATL+ +SKR+PRT+EE
Sbjct: 1024 --AAPQ---DSNLSGILLTALKNLRTDIVKESPDLVMAYHIFGNATLKEISKRLPRTKEE 1078
Query: 997 LLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNAN 1056
LL+ING+GKAKVSKYG RLLETI+STI + YKT SGKRRRDEN PN
Sbjct: 1079 LLDINGLGKAKVSKYGDRLLETIDSTINDHYKTRPG---------SGKRRRDENVNPNVA 1129
Query: 1057 KGDDDDFTKSTARSK 1071
+ DD D++ S + K
Sbjct: 1130 EDDDPDWSASQSHKK 1144
>gi|297837387|ref|XP_002886575.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332416|gb|EFH62834.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1172
Score = 1161 bits (3004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/1103 (57%), Positives = 765/1103 (69%), Gaps = 79/1103 (7%)
Query: 11 LHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRR-ASLQSSSDGSKFS 69
L E+EKAW TL +L I+ Y+RPG++ ++ D S + R + SS+DGS ++
Sbjct: 113 LARPEIEKAWCTLINLSINN-TYLRPGITPAIDDGSTDRSSSTKRSTVKVTSSADGSFYA 171
Query: 70 EPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAG-----AGKGLRGQNEIKASVVANA 124
+N + SQ + R T S + G GK R +E++ SV
Sbjct: 172 ---HNHPEHSQRSL------RGTAKSFDSFSSSSVGDNNITIGKVPRVNDEVRDSVTG-- 220
Query: 125 HFKFSDGFG----NHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKP 180
K+++G ++ ++ E E +ID D+I+E I+VDQIVM+H S C +P
Sbjct: 221 -CKYTNGMEMPPIKNSAHLVRLVEPREASLGEIDYDDIMEIIEVDQIVMDHCPSRCPKQP 279
Query: 181 SISRLPSITPNAGNDKFA--RQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIA 238
S+S+ D FA R++E L PELCS C+HG KLGLCPE S+H++ MKD L+A
Sbjct: 280 SVSKFV--------DTFASRREEEQGLFPELCSNCSHGIKLGLCPEASTHVEQMKDTLLA 331
Query: 239 ISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSAST-TRTYQYE 297
ISNE LDN +L P E+LRQ+RL L KQIQ LE Q +ER+KS ST + QYE
Sbjct: 332 ISNEFLDNTYDLGPDHVEQLRQKRLLLKKQIQQLEILIQNKERKKSECLVSTPSHNIQYE 391
Query: 298 TPQPAVLKIDPIRFDTQVH----LYNESEG---YGNWNSSSVSFSSVDRLGVSSYPVERE 350
TPQ + + D+ L +EG NWN S +R +SS VERE
Sbjct: 392 TPQTTNHVVVYTQTDSPDKSCGGLCPATEGRYVTDNWNMPRDYLVSKERYDISSGSVERE 451
Query: 351 PFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHD 410
+ ++I V E SND+KW+S DFPWTK LE NK VFGNHSFRPNQREIINATMSG D
Sbjct: 452 QSVSEVIDVTDTESSNDKKWASRDFPWTKNLEVYNKIVFGNHSFRPNQREIINATMSGCD 511
Query: 411 VFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWT 470
VFVLMPTGGGKSLTYQLPAL+C GITLVISPLVSLIQDQIM+LLQ NI A LS MEW
Sbjct: 512 VFVLMPTGGGKSLTYQLPALLCAGITLVISPLVSLIQDQIMNLLQTNISAASLSAGMEWA 571
Query: 471 EQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWG 530
EQ EIL+EL+S+ KYKLLYVTPEKVAKS+ L+R LE LN+R LLAR VIDEAHCVSQWG
Sbjct: 572 EQLEILQELSSENSKYKLLYVTPEKVAKSESLIRHLEILNSRSLLARFVIDEAHCVSQWG 631
Query: 531 HDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM 590
HDFRPDYQGLG+LKQKFPN P+LALTATAT SVKEDVVQALGLVNC++FRQSFNRPNLW
Sbjct: 632 HDFRPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWY 691
Query: 591 DC----EKVAERLQVGLSYGHFFLLKEFYVVS-LEC----------GHKAAFYHGSIDPA 635
K E + + HF Y +S ++C GHKAAFYHGS+DP
Sbjct: 692 SVVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEMLRAFGHKAAFYHGSMDPG 751
Query: 636 QRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 695
+RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR
Sbjct: 752 KRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 811
Query: 696 SSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCE 755
SSCVLYYSY+D+IRVKHMISQG Q G+N A+SGR+LETNTENLLRMVSYCE
Sbjct: 812 SSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYN--CKASSGRMLETNTENLLRMVSYCE 869
Query: 756 NDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFS 815
N+VDCRR LQLVH GEKFDS +CKKTCDNCS K I+KDVT A++LVELVKLTG++FS
Sbjct: 870 NEVDCRRFLQLVHLGEKFDSTNCKKTCDNCSSSKILIDKDVTVIARQLVELVKLTGERFS 929
Query: 816 SSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDV 875
S+HI+E++RGSLNQ VK++R ETL LHGAGKHL KSEASRIL +LV ED L E V+KSD+
Sbjct: 930 SAHIVEIYRGSLNQSVKRNRQETLHLHGAGKHLTKSEASRILHYLVTEDILAEGVRKSDL 989
Query: 876 YGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRN 935
YGSVSS+LKVN+SKA +L+ G Q++ +RFPS I ++K SKS + K+ +
Sbjct: 990 YGSVSSLLKVNRSKAASLLSGGQSITMRFPSTIKASKPSKS----------TAKVPLKQT 1039
Query: 936 DTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEE 995
P D NL L ++L+ LR+ +VKE+ +GVMAYHIFG ATL+ +SKR+PRT+E
Sbjct: 1040 TLPMAKAAPQDSNLPHILLTALKKLRSDIVKESSDGVMAYHIFGKATLEQISKRLPRTKE 1099
Query: 996 ELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNA 1055
ELL+ING+GKAKVSKYG RLLETI STI + YKT SGKRRRDEN PN
Sbjct: 1100 ELLDINGLGKAKVSKYGDRLLETIYSTINDHYKTGPG---------SGKRRRDENICPNV 1150
Query: 1056 NKGDDDDFTKSTARSKKRASKSQ 1078
DD D+T S +S K+A K++
Sbjct: 1151 ADDDDPDWTAS--QSHKKAVKNK 1171
>gi|218194880|gb|EEC77307.1| hypothetical protein OsI_15961 [Oryza sativa Indica Group]
Length = 2505
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/1168 (52%), Positives = 775/1168 (66%), Gaps = 92/1168 (7%)
Query: 4 QIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSS 63
+IQ RL + +EKAW +L + Q++R+NY+RPGLS V+ D+D +H SS
Sbjct: 1382 RIQGLERLQAPSIEKAWRSLRNTQVARKNYLRPGLSGKVKDCDSDHAHTYG----TSSSY 1437
Query: 64 DGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLR---GQNEIKASV 120
+ +K NR + E +G+ +++ AG R + ++A
Sbjct: 1438 NVNKMDSVSRNRNPTQESMHQTTE----SGTMEKNSSHLPAGTKSCTRTYLNNHVVQADT 1493
Query: 121 VANAHFKFSDGFGNHTTEAGQIDESAE-VLANKIDDDEILETIDVDQIVMEHYHSSCTPK 179
+ + + A ID + + +D+DE+L +IDVD+IVMEHY ++ TP+
Sbjct: 1494 ITTTNQSLARTGPELFKTAPFIDNMCDDAKLDAMDEDELLASIDVDRIVMEHYQATNTPR 1553
Query: 180 PSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAI 239
S S+ P N F DE LP EL +C+HG KL CPE SH+ +MKD L+AI
Sbjct: 1554 GS-SKSPLEKCN-----FNGFDENNLPQELSIMCDHGSKLAFCPEAKSHLLEMKDNLLAI 1607
Query: 240 SNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYR----QAEERQKSHFSASTTRTYQ 295
S+EL+D LSP Q++ L Q+R L KQI+LL Y Q EERQ+SH ASTT +Q
Sbjct: 1608 SHELIDG--QLSPQQSDDLHQKRALLKKQIELLGEYTARLTQDEERQQSHSMASTT-AHQ 1664
Query: 296 YETPQPAVLKIDPIR----FDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREP 351
P ++L ++ F + ++ NE G SS +S +D L + V+R+
Sbjct: 1665 GHHPT-SILSSSFVKDTNIFQSPIYTRNEP-GESGLCFSSAPYSYMDGLSMPLPSVQRD- 1721
Query: 352 FIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDV 411
+ P+ I ++Y EGS D++WSS F WTK+LEANNK+VFGN SFRPNQREIINATMSG+DV
Sbjct: 1722 YTPRAIDISYTEGSGDKQWSSTHFAWTKELEANNKRVFGNRSFRPNQREIINATMSGNDV 1781
Query: 412 FVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTE 471
FVLMPTGGGKSLTYQLPALIC G+TLV+SPLVSLIQDQIMHLLQANI A +LS +MEW+E
Sbjct: 1782 FVLMPTGGGKSLTYQLPALICNGVTLVVSPLVSLIQDQIMHLLQANISAAYLSASMEWSE 1841
Query: 472 QQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGH 531
QQEILREL S C YKLLYVTPEK+AKSD LLRQLE+L +R L+RIVIDEAHCVSQWGH
Sbjct: 1842 QQEILRELMSPTCTYKLLYVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGH 1901
Query: 532 DFRPDY-----QGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRP 586
DFRPDY Q LGILKQKFP TPVLALTATATASVKEDVVQ LGL NCIIFRQSFNRP
Sbjct: 1902 DFRPDYQFFIHQHLGILKQKFPQTPVLALTATATASVKEDVVQVLGLANCIIFRQSFNRP 1961
Query: 587 NL----WMDCEKVAERLQVGLSYGHFFLLKEFYVVS-LEC----------GHKAAFYHGS 631
NL W +K E + + H Y +S ++C GHKA+ YHGS
Sbjct: 1962 NLRYFVWPKTKKCLEDIHNFIHANHNKECGIIYCLSRMDCEKVAAKLREYGHKASHYHGS 2021
Query: 632 IDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGR 691
+DP RA +QKQWSKD INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGR
Sbjct: 2022 MDPEDRANIQKQWSKDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGR 2081
Query: 692 DGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMV 751
D Q SSCVL+Y+YSD+IR+KHM++QG AEQ P ++ + LET+ ENLLRMV
Sbjct: 2082 DSQLSSCVLFYNYSDYIRLKHMVTQGFAEQGTSAPRGG----SSQEQALETHKENLLRMV 2137
Query: 752 SYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTG 811
SYCENDVDCRRLLQL+HFGE F+ + C KTCDNC K ++EKDVT+ A++LV+LV +T
Sbjct: 2138 SYCENDVDCRRLLQLIHFGEMFNPSCCAKTCDNCLKELRWVEKDVTNIARQLVDLVMMTK 2197
Query: 812 QQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
Q +S++HILEV+RGS+NQ VKKHRH+TLSLHGAGKHLAK EA+RILRHLVIE+ L+E+VK
Sbjct: 2198 QTYSTTHILEVYRGSVNQNVKKHRHDTLSLHGAGKHLAKGEAARILRHLVIEEILIEDVK 2257
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
KS+ YGSVSSVLK N K+ +L+ G+ NVVL+FP+ + K+ D +
Sbjct: 2258 KSENYGSVSSVLKTNHKKSGDLLSGKHNVVLKFPTPEKAPKMGVLDESSV---------- 2307
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVP 991
P N T Q Q VD +L+A+LY +L+ LRT ++ E + ++AYHIF N TL+ +S RVP
Sbjct: 2308 PRINKTNQQSQ--VDGSLAAELYEALQCLRTQIMDENPQ-LLAYHIFKNETLKEISNRVP 2364
Query: 992 RTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSS--SNDSNDSGKRRRD- 1048
RT+EEL+EINGIGK K++KYG R+L TIE + + + SS SN+ +++ K+RR
Sbjct: 2365 RTKEELVEINGIGKNKLNKYGDRVLATIEDFLARYPNATRKTSSGGSNEHSEAVKKRRGF 2424
Query: 1049 --ENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVD-----DLDF 1101
N + N DDF + T +SKKRA+K++ + D+ V DL+
Sbjct: 2425 SVTNTSTNC-----DDFEERTVQSKKRAAKTRTR------QEISDAASIVQDVRYIDLEL 2473
Query: 1102 DEYEYVYEMNGSTTKPDQNNGGRVLPRW 1129
D E V E+ S KP + GRVLP W
Sbjct: 2474 DGCEQVNEVPYSVQKPMAS--GRVLPAW 2499
>gi|222628902|gb|EEE61034.1| hypothetical protein OsJ_14872 [Oryza sativa Japonica Group]
Length = 2486
Score = 1079 bits (2790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/1168 (51%), Positives = 774/1168 (66%), Gaps = 92/1168 (7%)
Query: 4 QIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSS 63
+IQ RL + +EKAW +L + Q++R+NY+RPGLS V+ D+D +H SS
Sbjct: 1363 RIQGLERLQAPSIEKAWRSLRNTQVARKNYLRPGLSGKVKDCDSDHAHTYG----TSSSY 1418
Query: 64 DGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLR---GQNEIKASV 120
+ +K NR + E +G+ +++ AG R + ++A
Sbjct: 1419 NVNKMDSVSRNRNPTQESMHQTTE----SGTMEKNSSHLPAGTKSCTRTYLNNHVVQADT 1474
Query: 121 VANAHFKFSDGFGNHTTEAGQIDESAE-VLANKIDDDEILETIDVDQIVMEHYHSSCTPK 179
+ + + A ID + + +D+DE+L +IDVD+IVMEHY ++ TP+
Sbjct: 1475 ITTTNQSLARTGPELFKTAPFIDNMCDDAKLDAMDEDELLASIDVDRIVMEHYQATNTPR 1534
Query: 180 PSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAI 239
S S+ P N F DE LP EL +C+HG KL CPE SH+ +MKD L+AI
Sbjct: 1535 GS-SKSPLEKCN-----FNGFDENNLPQELSIMCDHGSKLAFCPEAKSHLLEMKDNLLAI 1588
Query: 240 SNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYR----QAEERQKSHFSASTTRTYQ 295
S+EL+D LSP Q++ L Q+R L KQI+LL Y Q EERQ+SH ASTT +Q
Sbjct: 1589 SHELIDG--QLSPQQSDDLHQKRALLKKQIELLGEYTARLTQDEERQQSHSMASTT-AHQ 1645
Query: 296 YETPQPAVLKIDPIR----FDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREP 351
P ++L ++ F + ++ NE G SS +S +D L + V+R+
Sbjct: 1646 GHHPT-SILSSSFVKDTNIFQSPIYTRNEP-GESGLCFSSAPYSYMDGLSMPLPSVQRD- 1702
Query: 352 FIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDV 411
+ P+ I ++Y EGS D++WSS F WTK+LEANNK+VFGN SFRPNQREIINATMSG+DV
Sbjct: 1703 YTPRAIDISYTEGSGDKQWSSTHFAWTKELEANNKRVFGNRSFRPNQREIINATMSGNDV 1762
Query: 412 FVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTE 471
FVLMPTGGGKSLTYQLPALIC G+TLV+SPLVSLIQDQIMHLLQANI A +LS +MEW+E
Sbjct: 1763 FVLMPTGGGKSLTYQLPALICNGVTLVVSPLVSLIQDQIMHLLQANISAAYLSASMEWSE 1822
Query: 472 QQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGH 531
QQEILREL S C YKLLYVTPEK+AKSD LLRQLE+L +R L+RIVIDEAHCVSQWGH
Sbjct: 1823 QQEILRELMSPTCTYKLLYVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGH 1882
Query: 532 DFRPDY-----QGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRP 586
DFRPDY Q LGILKQKFP TPVLALTATATASVKEDVVQ LGL NCIIFRQSFNRP
Sbjct: 1883 DFRPDYQFFIHQHLGILKQKFPQTPVLALTATATASVKEDVVQVLGLANCIIFRQSFNRP 1942
Query: 587 NL----WMDCEKVAERLQVGLSYGHFFLLKEFYVVS-LEC----------GHKAAFYHGS 631
NL W +K E + + H Y +S ++C GH A+ YHGS
Sbjct: 1943 NLRYFVWPKTKKCLEDIHNFIHANHNKECGIIYCLSRMDCEKVAAKLREYGHTASHYHGS 2002
Query: 632 IDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGR 691
+DP RA +QKQWSKD INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGR
Sbjct: 2003 MDPEDRANIQKQWSKDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGR 2062
Query: 692 DGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMV 751
D Q S+CVL+Y+YSD+IR+KHM++QG AEQ P ++ + LET+ ENLLRMV
Sbjct: 2063 DSQLSTCVLFYNYSDYIRLKHMVTQGFAEQGTSAPRGG----SSQEQALETHKENLLRMV 2118
Query: 752 SYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTG 811
SYCENDVDCRRLLQL+HFGE F+ + C KTCDNC K ++EKDVT+ A++LV+LV +T
Sbjct: 2119 SYCENDVDCRRLLQLIHFGEMFNPSCCAKTCDNCLKELRWVEKDVTNIARQLVDLVMMTK 2178
Query: 812 QQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
Q +S++HILEV+RGS+NQ VKKHRH+TLSLHGAGKHLAK EA+RILRHLVIE+ L+E+VK
Sbjct: 2179 QTYSTTHILEVYRGSVNQNVKKHRHDTLSLHGAGKHLAKGEAARILRHLVIEEILIEDVK 2238
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
KS+ YGSVSSVLK N K+ +L+ G+ NVVL+FP+ + K+ D +
Sbjct: 2239 KSENYGSVSSVLKTNHKKSGDLLSGKHNVVLKFPTPEKAPKMGVLDESSV---------- 2288
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVP 991
P N T Q Q VD +L+A+LY +L+ LRT ++ E + ++AYHIF N TL+ +S R+P
Sbjct: 2289 PRINKTNQQSQ--VDGSLAAELYEALQCLRTQIMDENPQ-LLAYHIFKNETLKEISNRMP 2345
Query: 992 RTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSS--SNDSNDSGKRRRD- 1048
RT+EEL+EINGIGK K++KYG R+L TIE + + + SS SN+ +++ K+RR
Sbjct: 2346 RTKEELVEINGIGKNKLNKYGDRVLATIEDFLARYPNATRKTSSGGSNEHSEAVKKRRGF 2405
Query: 1049 --ENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVD-----DLDF 1101
N + N DDF + T +SKKRA+K++ + D+ V DL+
Sbjct: 2406 SVTNTSTNC-----DDFEERTVQSKKRAAKTRTR------QEISDAASIVQDVRYIDLEL 2454
Query: 1102 DEYEYVYEMNGSTTKPDQNNGGRVLPRW 1129
D E V E+ S KP + GRVLP W
Sbjct: 2455 DGCEQVNEVPYSVQKPVAS--GRVLPAW 2480
>gi|357167600|ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Brachypodium
distachyon]
Length = 1126
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/1020 (54%), Positives = 670/1020 (65%), Gaps = 136/1020 (13%)
Query: 157 EILETIDVDQIVMEHYHSSCTPKPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHG 216
EI+ +IDVD+IVMEHY ++ T + ++ TP+ DE LP EL IC HG
Sbjct: 174 EIMASIDVDRIVMEHYEATNTHR-GLASWQMSTPSGNKCNLTGLDENSLPQELSEICIHG 232
Query: 217 CKLGLCPETSSHIQDMKDMLIAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGY- 275
CKL CPE H+Q+MKD ++AI +EL+D + LSP +E LR++R L KQ +LLE Y
Sbjct: 233 CKLAFCPEAKYHVQEMKDQMLAICSELIDGSGELSPQDSEALRKQRAHLKKQTKLLEDYM 292
Query: 276 ---RQAEERQKSHFSASTTRTYQYETPQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSV 332
Q +ERQ+SH A+ ++ + P+ T S Y N
Sbjct: 293 ARSTQDDERQRSHSMATASQGHH-----------PPMTPST-------SRDYTRTN---- 330
Query: 333 SFSSVDRLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNH 392
I +NY EGS D+KWSS DFPWTK+LEA+NK+VFGNH
Sbjct: 331 ------------------------IDINYTEGSGDKKWSSKDFPWTKELEAHNKRVFGNH 366
Query: 393 SFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMH 452
SFRPNQREIINATM G DVFVLMPTGGGKSLTYQLPALI GITLV+ PLVSLIQDQIMH
Sbjct: 367 SFRPNQREIINATMYGSDVFVLMPTGGGKSLTYQLPALIDEGITLVVCPLVSLIQDQIMH 426
Query: 453 LLQANIPATFLSGNMEWTEQQEILRELN--SDYCKYKLLYVTPEKVAKSDVLLRQLESLN 510
L QANIPA LS N+EWTEQQ ILR+L S C YKLLYVTPEK+AKSD LLRQLE L
Sbjct: 427 LAQANIPAICLSANVEWTEQQRILRDLMSPSSTCTYKLLYVTPEKIAKSDALLRQLEILY 486
Query: 511 ARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQA 570
+R L+RIVIDEAHCVSQWGHDFRPDYQ LG+LKQKFP TPVLALTATATASVKEDVVQA
Sbjct: 487 SRGHLSRIVIDEAHCVSQWGHDFRPDYQHLGLLKQKFPETPVLALTATATASVKEDVVQA 546
Query: 571 LGLVNCIIFRQSFNRPNL----------------------------------WMDCEKVA 596
LGL NC++FRQSFNRPNL MDCEKVA
Sbjct: 547 LGLANCVVFRQSFNRPNLRYIVMPKTKKCLEDIDNFIRASHHKECGIIYCLSRMDCEKVA 606
Query: 597 ERLQVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATV 656
+L+ E GHKA+ YHGS+DP R +Q+QWS+D+INIICATV
Sbjct: 607 AKLR-------------------EYGHKASHYHGSMDPLDRTEIQRQWSRDKINIICATV 647
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY+YSD+IRVKHMI+Q
Sbjct: 648 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYSDYIRVKHMITQ 707
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
GV EQ P ++++ + LET+ ENLL MVSYCENDVDCRRLLQL+HFGE FD +
Sbjct: 708 GVVEQETSMPRGG--SLSSHRQALETHKENLLCMVSYCENDVDCRRLLQLIHFGETFDPS 765
Query: 777 HCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
C KTCDNC K +IEKDVT A++LVELV +T S+SHILEVFRGS+NQ VKK+RH
Sbjct: 766 CCAKTCDNCMKEMRWIEKDVTTIARQLVELVMMTRPACSTSHILEVFRGSVNQNVKKNRH 825
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+TLSLHG GK+LAK EASR+LRHLV E L+E+VKKSD YG VSSVLKVNQ K L G
Sbjct: 826 DTLSLHGGGKNLAKGEASRVLRHLVTEGILIEDVKKSDTYGLVSSVLKVNQMKVGGLRSG 885
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKL----SPSRNDTPSQPQNEVDLNLSAK 952
+VL+FP+ + + L GKL +P N T +Q Q+EVD N+S+
Sbjct: 886 NHTIVLKFPT---------------REAPLMGKLDESSTPQINKT-AQRQSEVDENISSL 929
Query: 953 LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
L+ +L+ LR+ + E+ G +HIF N TL+ +S RVPRT+EELLEINGIGK K++KYG
Sbjct: 930 LFETLKCLRS-QIAESTAGCGVHHIFKNETLKEISSRVPRTKEELLEINGIGKVKLNKYG 988
Query: 1013 VRLLETIESTIKEF--YKTDKNGSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKSTARS 1070
+L TIE + F + S SN+ N++ K+RR + A NA+ G D F + T +S
Sbjct: 989 DSVLATIEDFLSHFPNASKRSSSSGSNEQNEAPKKRRGLS-ATNAS-GKCDGFEERTVQS 1046
Query: 1071 KKRASKSQNKTVEVINHNEPDSYECVDDLDFDEYEYV-YEMNGSTTKPDQNNGGRVLPRW 1129
KK A+K++N + + DLD D E V E+ S +P ++ RVLP+W
Sbjct: 1047 KKCAAKTKNTKQGISDAASMVQDVRYIDLDLDGCEDVDDELCSSAQQPVASS--RVLPKW 1104
>gi|38345369|emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japonica Group]
Length = 1164
Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/1168 (49%), Positives = 748/1168 (64%), Gaps = 107/1168 (9%)
Query: 4 QIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSS 63
+IQ RL + +EKAW +L + Q++R+NY+RPGLS V+ D+D +H SS
Sbjct: 56 RIQGLERLQAPSIEKAWRSLRNTQVARKNYLRPGLSGKVKDCDSDHAHTYG----TSSSY 111
Query: 64 DGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLR---GQNEIKASV 120
+ +K NR + E +G+ +++ AG R + ++A
Sbjct: 112 NVNKMDSVSRNRNPTQESMHQTTE----SGTMEKNSSHLPAGTKSCTRTYLNNHVVQADT 167
Query: 121 VANAHFKFSDGFGNHTTEAGQIDESAE-VLANKIDDDEILETIDVDQIVMEHYHSSCTPK 179
+ + + A ID + + +D+DE+L +IDVD+IVMEHY ++ TP+
Sbjct: 168 ITTTNQSLARTGPELFKTAPFIDNMCDDAKLDAMDEDELLASIDVDRIVMEHYQATNTPR 227
Query: 180 PSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAI 239
S S+ P N F DE LP EL +C+HG KL CPE SH+ +MKD L+AI
Sbjct: 228 GS-SKSPLEKCN-----FNGFDENNLPQELSIMCDHGSKLAFCPEAKSHLLEMKDNLLAI 281
Query: 240 SNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYR----QAEERQKSHFSASTTRTYQ 295
S+EL+D LSP Q++ L Q+R L KQI+LL Y Q EERQ+SH ASTT +Q
Sbjct: 282 SHELIDG--QLSPQQSDDLHQKRALLKKQIELLGEYTARLTQDEERQQSHSMASTT-AHQ 338
Query: 296 YETPQPAVLKIDPIR----FDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREP 351
P ++L ++ F + ++ NE G SS +S +D L + V+R+
Sbjct: 339 GHHPT-SILSSSFVKDTNIFQSPIYTRNEP-GESGLCFSSAPYSYMDGLSMPLPSVQRD- 395
Query: 352 FIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDV 411
+ P+ I ++Y EGS D++WSS F WTK+LEANNK+VFGN SFRPNQREIINATMSG+DV
Sbjct: 396 YTPRAIDISYTEGSGDKQWSSTHFAWTKELEANNKRVFGNRSFRPNQREIINATMSGNDV 455
Query: 412 FVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTE 471
FVLMPTGGGKSLTYQ + I V + + + ++ +ANI A +LS +MEW+E
Sbjct: 456 FVLMPTGGGKSLTYQSQNV---SIFEVGTGIKRVGRND---WRKANISAAYLSASMEWSE 509
Query: 472 QQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGH 531
QQEILREL S C YKLLYVTPEK+AKSD LLRQLE+L +R L+RIVIDEAHCVSQWGH
Sbjct: 510 QQEILRELMSPTCTYKLLYVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGH 569
Query: 532 DFRPDYQ-----GLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRP 586
DFRPDYQ LGILKQKFP TPVLALTATATASVKEDVVQ LGL NCIIFRQSFNRP
Sbjct: 570 DFRPDYQFFIHQHLGILKQKFPQTPVLALTATATASVKEDVVQVLGLANCIIFRQSFNRP 629
Query: 587 NL----WMDCEKVAERLQVGLSYGHFFLLKEFYVVS-LEC----------GHKAAFYHGS 631
NL W +K E + + H Y +S ++C GH A+ YHGS
Sbjct: 630 NLRYFVWPKTKKCLEDIHNFIHANHNKECGIIYCLSRMDCEKVAAKLREYGHTASHYHGS 689
Query: 632 IDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGR 691
+DP RA +QKQWSKD INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGR
Sbjct: 690 MDPEDRANIQKQWSKDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGR 749
Query: 692 DGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMV 751
D Q S+CVL+Y+YSD+IR+KHM++QG AEQ P ++ + LET+ ENLLRMV
Sbjct: 750 DSQLSTCVLFYNYSDYIRLKHMVTQGFAEQGTSAPRGG----SSQEQALETHKENLLRMV 805
Query: 752 SYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTG 811
SYCENDVDCRRLLQL+HFGE F+ + C KTCDNC K ++EKDVT+ A++LV+LV +T
Sbjct: 806 SYCENDVDCRRLLQLIHFGEMFNPSCCAKTCDNCLKELRWVEKDVTNIARQLVDLVMMTK 865
Query: 812 QQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
Q +S++HILEV+RGS+NQ VKKHRH+TLSLHGAGKHLAK EA+RILRHLVIE+ L+E+VK
Sbjct: 866 QTYSTTHILEVYRGSVNQNVKKHRHDTLSLHGAGKHLAKGEAARILRHLVIEEILIEDVK 925
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
KS+ YGSVSSVLK + + RFP+ + K+ D +
Sbjct: 926 KSENYGSVSSVLKFKT---------YEKIYQRFPTPEKAPKMGVLDESSV---------- 966
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVP 991
P N T Q Q VD +L+A+LY +L+ LRT ++ E + ++AYHIF N TL+ +S R+P
Sbjct: 967 PRINKTNQQSQ--VDGSLAAELYEALQCLRTQIMDENPQ-LLAYHIFKNETLKEISNRMP 1023
Query: 992 RTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSS--SNDSNDSGKRRRD- 1048
RT+EEL+EINGIGK K++KYG R+L TIE + + + SS SN+ +++ K+RR
Sbjct: 1024 RTKEELVEINGIGKNKLNKYGDRVLATIEDFLARYPNATRKTSSGGSNEHSEAVKKRRGF 1083
Query: 1049 --ENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVD-----DLDF 1101
N + N DDF + T +SKKRA+K+ +T + I+ D+ V DL+
Sbjct: 1084 SVTNTSTNC-----DDFEERTVQSKKRAAKT--RTRQEIS----DAASIVQDVRYIDLEL 1132
Query: 1102 DEYEYVYEMNGSTTKPDQNNGGRVLPRW 1129
D E V E+ S KP + GRVLP W
Sbjct: 1133 DGCEQVNEVPYSVQKPVAS--GRVLPAW 1158
>gi|242063976|ref|XP_002453277.1| hypothetical protein SORBIDRAFT_04g003070 [Sorghum bicolor]
gi|241933108|gb|EES06253.1| hypothetical protein SORBIDRAFT_04g003070 [Sorghum bicolor]
Length = 1154
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/1186 (46%), Positives = 710/1186 (59%), Gaps = 172/1186 (14%)
Query: 4 QIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSS 63
+IQ R H+ +EKAW +L + Q +R++Y+RPGLS V+ D D H R + S
Sbjct: 58 KIQGSERFHAPLIEKAWRSLCNTQAARKSYLRPGLSAKVK--DCDRGHA---RTCGEGSY 112
Query: 64 DGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNV--RDAGAGKGLRGQNEIKASVV 121
+ +K + NR +V ++ T L NN + G +R +++ V
Sbjct: 113 NTNKMATVSGNRMP------SVESTSQPTERISLQNNSSHQPVGISSSMRS---YQSNHV 163
Query: 122 ANAHFKFSDGFGNHTTEAGQIDESAEVLANKID-------DDEILETIDVDQIVMEHYHS 174
A + ++ + T+A + +SA V N DD+IL +IDVD+IVMEHY +
Sbjct: 164 AQEDTRATNQYNFARTDAA-LHQSAPVADNMCTYDNYDAMDDDILASIDVDRIVMEHYQA 222
Query: 175 SCTPKPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKD 234
TP+ S + TP F DE LP EL +C+H CKL C E +H+Q+MKD
Sbjct: 223 --TPRGSSHNMS--TPPGNKCSFNGMDEANLPRELSELCSHQCKLAFCREAMTHLQEMKD 278
Query: 235 MLIAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYR----QAEERQKSHFSAST 290
L+A++NELLD+ L+P +++L Q RL L K +QLLE + Q EERQ SH AST
Sbjct: 279 ELLAVANELLDDDGELNPQHSQELHQRRLHLKKLVQLLEDHMTRSAQDEERQISHSMAST 338
Query: 291 TRTYQYETPQP--AVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVE 348
T Q+ P + D RF +QV++ N + SS +S D L V
Sbjct: 339 KATQQHLPPMTPGSTFITDSNRFQSQVYIGNGPRD-SDLCYSSAPYSCSDNLSTPLNSVW 397
Query: 349 REPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSG 408
+ + PK+I +NY EGS D+KWSS +FPWTK LEA N+ FGN SFRPNQREIINATMSG
Sbjct: 398 KS-YTPKVIDINYTEGSGDRKWSSTNFPWTKDLEAKNRNKFGNRSFRPNQREIINATMSG 456
Query: 409 HDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNME 468
+DVFVLMPTGGGKSLTYQLPALI G+TLV+ PLVSLIQDQIMHL QANIPAT+LSGN++
Sbjct: 457 YDVFVLMPTGGGKSLTYQLPALISVGLTLVVCPLVSLIQDQIMHLSQANIPATYLSGNLD 516
Query: 469 WTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQ 528
W+EQQEI+R+L S C+YKLLYVTPEK+A+S L L L+++ L+RIVIDEAHCVSQ
Sbjct: 517 WSEQQEIMRDLKS--CRYKLLYVTPEKIARSGALSGLLRDLDSQGHLSRIVIDEAHCVSQ 574
Query: 529 WGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL 588
WGHDFRPDY+ LG+LKQ FP TPVLALTATATA VKEDVVQAL L NCI+F+QSFNRPNL
Sbjct: 575 WGHDFRPDYKELGVLKQNFPKTPVLALTATATARVKEDVVQALALENCIVFKQSFNRPNL 634
Query: 589 WM----DCEKVAERLQVGLSYGHFFLLKEFYVVS-----------LECGHKAAFYHGSID 633
+K E + + + H+ Y +S ECGH A YHGS+D
Sbjct: 635 RYYLRPKTKKCVEDIDMFIRENHYKECGIIYCLSRMDCEKVSEKLRECGHTVAHYHGSMD 694
Query: 634 PAQRAFVQKQWSKDEINIICATVAFGM-------------------------GINKPDVR 668
P R +Q+ WSKD+INIICAT+AFGM GINKPDVR
Sbjct: 695 PVNRTRIQEDWSKDKINIICATIAFGMGNLIFQTPVYVTSIIGCSILIGQTVGINKPDVR 754
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FVIHHSLPKSIEGYHQECGRAGRDGQ SSC+LYY YSD+
Sbjct: 755 FVIHHSLPKSIEGYHQECGRAGRDGQPSSCLLYYQYSDY--------------------- 793
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
VSYCENDVDCRRLLQL+HFGE+FD + C KTCDNC K
Sbjct: 794 ----------------------VSYCENDVDCRRLLQLIHFGERFDPSLCAKTCDNCLKE 831
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
++EKDVT+ A++LV+LV +TG SS+HILEV+RGS++Q VKK RH+ L LHGAGKHL
Sbjct: 832 SGWVEKDVTNIARQLVDLVTMTGHSNSSTHILEVYRGSVSQNVKKQRHDALPLHGAGKHL 891
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
AK EA+RI+RHLV E+ L+E+VKKSD+ FP+
Sbjct: 892 AKGEAARIMRHLVTEEILIEDVKKSDM----------------------------FPAPG 923
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
++K+ D + L P N T Q Q+EVD L++ LY +L LR +++E
Sbjct: 924 KASKMGNLDTS----------LFPQINKTVQQ-QSEVDEKLASILYEALLTLRRQIMEEC 972
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYK 1028
EG AYHIF TL+ +S RVPRT+EELL+INGIGK K+ KYG R+L TIE + +
Sbjct: 973 SEGCHAYHIFKTDTLKEMSIRVPRTKEELLDINGIGKTKLKKYGDRVLATIEDFLSKHPN 1032
Query: 1029 TDKN--GSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKT-VEVI 1085
+N GS + +++ K+RR + + G DDDF + T +SKKRA+K++ + +
Sbjct: 1033 PRRNISGSGGKEHSEAAKKRRGSTASSAVSCG-DDDFEEPTGQSKKRAAKTRTVSDAASM 1091
Query: 1086 NHNEPDSYECVD-DLDFDEYEYVYEMNGSTTKPDQNNGGRVLPRWS 1130
H C+D DLD E V +++ + P GRVLP+W+
Sbjct: 1092 VHGA----RCIDADLDGPE---VVDVDEHCSVPKPVASGRVLPKWA 1130
>gi|12323338|gb|AAG51646.1|AC018908_12 putative DNA helicase; 33057-26178 [Arabidopsis thaliana]
Length = 1031
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/939 (55%), Positives = 619/939 (65%), Gaps = 110/939 (11%)
Query: 11 LHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSSDGSKFSE 70
L ++EKAW TL +L I+ Y+RPG++ + DND++ S SS+ GS F
Sbjct: 17 LARPQIEKAWCTLINLSINN-TYLRPGITPAI---DNDST-------SRTSSTKGSTFK- 64
Query: 71 PMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLR-------GQNEIKASVVAN 123
+ + GS N E H +VR G K + G N+I V
Sbjct: 65 -VTSNADGSFCAHNHPE--------HSQRSVR--GTAKSIDSFSSSSVGDNKIIIDKVPR 113
Query: 124 AHFKFSDGFG----------NHTTEAGQIDESAEVLANKIDDDEILE------------- 160
+++ D ++ + + E EV +ID D+I+E
Sbjct: 114 VNYEVRDSVTVTNGMEMPPIKNSAQLARPVEPREVSLGEIDYDDIMENRLTSTCANFGAQ 173
Query: 161 TIDVDQIVMEHYHSSCTPKPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKL- 219
IDVDQI MEH S+CT +PS+S+ I + R++E LPPE+CS C+HG KL
Sbjct: 174 IIDVDQIAMEHCPSTCTKQPSVSKFVDIFTSR------REEEQGLPPEICSNCSHGIKLL 227
Query: 220 -----------------GLCPETSSHIQDMKDMLIAISNELLDNATNLSPAQTEKLRQER 262
GLCPE S+H++ MKD L+AISNE+LDN +L P E+L Q+R
Sbjct: 228 HKPIGFLMLFALISTQLGLCPEASTHVEQMKDTLLAISNEILDNTYDLGPDHVEQLHQKR 287
Query: 263 LQLSKQIQLLEGYRQAEERQKSHFSAST-TRTYQYETPQPAVLKIDPIRFDTQVHLYNES 321
L L KQIQ LE +ER+KS S + QYETPQ L++ + D+ H+ +
Sbjct: 288 LLLKKQIQQLEILIHNKERKKSQCLVSIPSHNTQYETPQTTNLEVVYGQTDSPTHVKEQG 347
Query: 322 EGY-GNWNSSSVSFSSVDRLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWSSWDFPWTKK 380
NWN S +R +SS ERE + ++I V E SND+KW+S DFPWTK
Sbjct: 348 RCVTDNWNMPRDYLVSKERYDISSGSEEREQSVSEVIDVTDTESSNDKKWTSSDFPWTKN 407
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE NK VFGNHSFRPNQREIINATMSG DVF LPAL+C GITLVIS
Sbjct: 408 LEVYNKLVFGNHSFRPNQREIINATMSGCDVF--------------LPALLCAGITLVIS 453
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PLVSLIQDQIM+LLQ NI A LS MEW EQ EIL+EL+S+ KYKLLYVTPEKVAKS+
Sbjct: 454 PLVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSE 513
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
LLR LE LN+R LLAR VIDEAHCVSQWGHDFRPDYQGLG+LKQKFPN P+LALTATAT
Sbjct: 514 SLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATAT 573
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----EKVAERLQVGLSYGHFFLLKEFYV 616
SVKEDVVQALGLVNC++FRQSFNRPNLW K E + + HF Y
Sbjct: 574 TSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGIIYC 633
Query: 617 VS-LEC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKP 665
+S ++C GHKAAFYHGS+DP +RAFVQKQWSKDEINIICATVAFGMGINKP
Sbjct: 634 LSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKP 693
Query: 666 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFT 725
DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSY+D+IRVKHMISQG Q
Sbjct: 694 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMK 753
Query: 726 PGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC 785
G+N A+SGR+LETNTENLLRMVSYCEN+VDCRR LQLVH GEKFDS +CK TCDNC
Sbjct: 754 MGYN--CKASSGRMLETNTENLLRMVSYCENEVDCRRFLQLVHLGEKFDSTNCKNTCDNC 811
Query: 786 SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
S K I+KDVT A++LV LVKLTG++FSS+HI+E++RGSLNQ VK++R +TL LHGAG
Sbjct: 812 SSSKILIDKDVTVIARQLVALVKLTGERFSSAHIVEIYRGSLNQSVKRNRQDTLHLHGAG 871
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLK 884
KHL KSEASRIL +LV ED L E VKKS++YGSVSS+LK
Sbjct: 872 KHLTKSEASRILHYLVTEDILAEGVKKSELYGSVSSLLK 910
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 91/124 (73%), Gaps = 9/124 (7%)
Query: 948 NLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAK 1007
NLS L ++L+ LRT +VKE+ + VMAYHIFGNATL+ +SKR+PRT+EELL+ING+GKAK
Sbjct: 911 NLSGILLTALKNLRTDIVKESPDLVMAYHIFGNATLKEISKRLPRTKEELLDINGLGKAK 970
Query: 1008 VSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKST 1067
VSKYG RLLETI+STI + YKT SGKRRRDEN PN + DD D++ S
Sbjct: 971 VSKYGDRLLETIDSTINDHYKTRPG---------SGKRRRDENVNPNVAEDDDPDWSASQ 1021
Query: 1068 ARSK 1071
+ K
Sbjct: 1022 SHKK 1025
>gi|1931649|gb|AAB65484.1| DNA helicase isolog; 74946-78841 [Arabidopsis thaliana]
Length = 665
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/690 (65%), Positives = 513/690 (74%), Gaps = 97/690 (14%)
Query: 232 MKDMLIAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSAST- 290
MKD+L+AISNELLD+AT+LSP + +LRQERL+L KQIQ LE + + +E QKS F +ST
Sbjct: 1 MKDVLLAISNELLDDATDLSPDRVGQLRQERLRLKKQIQQLENHIRDKESQKSQFLSSTA 60
Query: 291 TRTYQYETPQPAVLKIDPIRFDTQVHLYNESE-GYGNWNSSSVSFSSVDRLGVSSYPVER 349
TR +QYETP+ K+D + D + H+ ++ +WN+ S SVDR
Sbjct: 61 TRIFQYETPKSTNYKMDQPQTDFRAHVSDQGRYACDSWNTPRDSSFSVDRY--------- 111
Query: 350 EPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGH 409
++ NNKKVFGNHSFRPNQREIINATMSG
Sbjct: 112 -------------------------------VQVNNKKVFGNHSFRPNQREIINATMSGS 140
Query: 410 DVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEW 469
DVFVLMPTGGGKSLTYQLPALIC GITLVISPLVSLIQDQIM+LLQANIPA LS MEW
Sbjct: 141 DVFVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEW 200
Query: 470 TEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQW 529
EQ +I +ELNS++ KYKLLYVTPEKVAKSD LLR LE+LN+R LLAR VIDEAHCVSQW
Sbjct: 201 AEQLKIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQW 260
Query: 530 GHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW 589
GHDFRPDYQ LGILKQKFPN PVLALTATATASVKEDVVQALGLVNC++FRQSFNRPNLW
Sbjct: 261 GHDFRPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLW 320
Query: 590 ----------------------------------MDCEKVAERLQVGLSYGHFFLLKEFY 615
MDCEKV+ERLQ
Sbjct: 321 YSVVPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQ--------------- 365
Query: 616 VVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 675
E GHKAAFYHGS++P QRAF+Q QWSKDEINIICATVAFGMGINKPDVRFVIHHSL
Sbjct: 366 ----EFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 421
Query: 676 PKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVAN 735
PKSIEGYHQECGRAGRDGQRSSCVLYY Y D+IRVKHMISQG +QSP G+NR VA+
Sbjct: 422 PKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNR--VAS 479
Query: 736 SGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKD 795
SGR+LETNTENLLRMV YCEN+V+CRR LQLVH GEKFDS +CKKTCDNC +S I+KD
Sbjct: 480 SGRLLETNTENLLRMVRYCENEVECRRFLQLVHLGEKFDSTNCKKTCDNCCSSQSLIDKD 539
Query: 796 VTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASR 855
VT ++LVELVK TG++FSS+HILEV+RGSLNQ VKKHRHETL HGAGKHL+K E SR
Sbjct: 540 VTLITRQLVELVKQTGERFSSAHILEVYRGSLNQMVKKHRHETLQFHGAGKHLSKIEVSR 599
Query: 856 ILRHLVIEDFLMEEVKKSDVYGSVSSVLKV 885
IL +LV ED L+E+V+KSD+YGSVSS+L+V
Sbjct: 600 ILHYLVTEDILVEDVRKSDMYGSVSSLLQV 629
>gi|302772997|ref|XP_002969916.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
gi|300162427|gb|EFJ29040.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
Length = 703
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/713 (56%), Positives = 515/713 (72%), Gaps = 25/713 (3%)
Query: 358 KVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPT 417
+VNY+EG+ND++WS DFPW+ L+ANN++ FGN SFRPNQ EIINATMSGHDVFVLMPT
Sbjct: 1 EVNYVEGANDRQWSRSDFPWSMDLKANNRRYFGNKSFRPNQHEIINATMSGHDVFVLMPT 60
Query: 418 GGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILR 477
GGGKSLTYQLPA+ CPG+TLV+ PLVSLI DQIMHL QA+I A LS N+E+ EQ++IL+
Sbjct: 61 GGGKSLTYQLPAICCPGVTLVVCPLVSLIMDQIMHLSQASIRAEHLSSNLEYEEQRQILQ 120
Query: 478 ELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDY 537
+LN D+C+Y+LLYVTPEK+A+SD LLR LE+L+ R LLARIVIDEAHCVSQWGHDFRPDY
Sbjct: 121 QLNFDHCEYRLLYVTPEKIARSDNLLRNLENLHRRRLLARIVIDEAHCVSQWGHDFRPDY 180
Query: 538 QGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----E 593
Q LGILKQKFP+ P++ALTATAT VKEDVVQALGL CIIFRQ+FNRPNL +
Sbjct: 181 QNLGILKQKFPDVPLMALTATATMRVKEDVVQALGLCKCIIFRQTFNRPNLRYSVVPKTK 240
Query: 594 KVAERLQVGLSYGHFFLLKEFYVVS-LEC----------GHKAAFYHGSIDPAQRAFVQK 642
KV E + + + Y S ++C GHK FYH S+DP +R VQ+
Sbjct: 241 KVYEEIDAFIKENYPHESGIIYCFSKMDCERVCEQLRKTGHKIGFYHASMDPQERNRVQR 300
Query: 643 QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY 702
WSKDEINIICATVAFGMGINKPDVRFVIHHS+PKSIEGYHQE GRAGRD +SC+LYY
Sbjct: 301 MWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQESGRAGRDNLPASCILYY 360
Query: 703 SYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRR 762
SYSD++RVKH++SQG +Q+ N + AN L+TN +NL RM +YCEN+VDCRR
Sbjct: 361 SYSDYVRVKHLLSQGAVDQTSTGRSWNNSDTANQ---LKTNFDNLQRMGAYCENEVDCRR 417
Query: 763 LLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEV 822
LQL HFGEKFDSA CK TCDNCSK SF+E+D+T ++LV+L+ GQ F+ SH+++V
Sbjct: 418 SLQLGHFGEKFDSASCKSTCDNCSKAVSFVEEDMTPVCQQLVQLINGLGQSFTMSHVIDV 477
Query: 823 FRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV 882
FRGS++Q VK H LHGAGK L KS RIL LV ++ L E + KSD +GS+SS+
Sbjct: 478 FRGSMSQQVKNANHHLQELHGAGKSLNKSVVERILHRLVFDEVLKENINKSDTFGSISSI 537
Query: 883 LKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQ 942
LKVN KA L G +V++FP+ + K ++ V+ K L + KLS + S
Sbjct: 538 LKVNDYKARELFDGVCKIVMKFPAVKKADKPERTPVSTKKAPLAT-KLSDPEDGLSSSSS 596
Query: 943 NEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEING 1002
+S ++YS+L+ LRT ++ E G ++ YHI GN L +SKR+P+T +ELLEING
Sbjct: 597 VSP--AISMEVYSALQKLRTEIMNEIGGNLLPYHIMGNGELHQISKRLPKTVDELLEING 654
Query: 1003 IGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNA 1055
IGK K +KYG R+LE ++ ++E +DK + + ++ KR+RD AP++
Sbjct: 655 IGKVKSNKYGARILEVVDQVVREHSSSDKTRNKVSAAS-MPKRQRD---APDS 703
>gi|302799268|ref|XP_002981393.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
gi|300150933|gb|EFJ17581.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
Length = 703
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/732 (55%), Positives = 514/732 (70%), Gaps = 63/732 (8%)
Query: 358 KVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPT 417
+VNY+EG+ND++WS DFPW+ L+ANN++ FGN SFRPNQ EIINATMSGHDVFVLMPT
Sbjct: 1 EVNYVEGANDRQWSRSDFPWSMDLKANNRRYFGNKSFRPNQHEIINATMSGHDVFVLMPT 60
Query: 418 GGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILR 477
GGGKSLTYQLPA+ CPG+TLV+ PLVSLI DQIMHL QA+I A LS N+E+ EQ++IL+
Sbjct: 61 GGGKSLTYQLPAICCPGVTLVVCPLVSLIMDQIMHLSQASIRAEHLSSNLEYEEQRQILQ 120
Query: 478 ELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDY 537
+LN D+C+Y+LLYVTPEK+A+SD LLR LE+L+ R LLARIVIDEAHCVSQWGHDFRPDY
Sbjct: 121 QLNFDHCEYRLLYVTPEKIARSDNLLRNLENLHRRRLLARIVIDEAHCVSQWGHDFRPDY 180
Query: 538 QGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW-------- 589
Q LGILKQKF + P++ALTATAT VKEDVVQALGL CIIFRQ+FNRPNL
Sbjct: 181 QNLGILKQKFSDVPLMALTATATMRVKEDVVQALGLCKCIIFRQTFNRPNLRYSVVPKTK 240
Query: 590 --------------------------MDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGH 623
MDCE+V E+L+ + GH
Sbjct: 241 KVYEEIDAFIKENYPRESGIIYCFSKMDCERVCEQLR-------------------KTGH 281
Query: 624 KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYH 683
K FYH S+DP +R VQ+ WSKDEINIICATVAFGMGINKPDVRFVIHHS+PKSIEGYH
Sbjct: 282 KIGFYHASMDPQERNRVQRMWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEGYH 341
Query: 684 QECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETN 743
QE GRAGRD +SC+LYYSYSD++RVKH++SQG +Q+ N + AN ++TN
Sbjct: 342 QESGRAGRDNLPASCILYYSYSDYVRVKHLLSQGAVDQTSTGRSWNNSDTANQ---MKTN 398
Query: 744 TENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKL 803
+NL RM +YCEN+VDCRR LQL HFGEKFDSA CK TCDNCSK SF+E+D+T ++L
Sbjct: 399 FDNLQRMGAYCENEVDCRRSLQLGHFGEKFDSASCKSTCDNCSKAVSFVEEDMTPVCQQL 458
Query: 804 VELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIE 863
V+L+ GQ F+ SH+++VFRGS++Q VK H LHGAGK L KS RIL LV +
Sbjct: 459 VQLINGLGQSFTMSHVIDVFRGSMSQQVKNANHHLQELHGAGKSLNKSVVERILHRLVFD 518
Query: 864 DFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKG 923
+ L E + KSD +GS+SS+LKVN KA L G ++++FP+A + K ++ V+ K
Sbjct: 519 EVLKENINKSDTFGSISSILKVNDYKARELFDGVCKIMMKFPAAKKADKPERTPVSTKKA 578
Query: 924 SLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATL 983
L + KLS + S +S ++YS+L+ LRT ++ E G ++ YHI GN L
Sbjct: 579 PLAT-KLSDPEDGLSSSSSVSP--AISMEVYSALQKLRTEIMNEIGGNLLPYHIMGNGEL 635
Query: 984 QHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSG 1043
+SKR+P+T +ELLEINGIGK K +KYG R+LE ++ ++E +DK + + ++
Sbjct: 636 HQISKRLPKTVDELLEINGIGKVKSNKYGARILEVVDQVVREHSSSDKTRNKVSAAS-MP 694
Query: 1044 KRRRDENEAPNA 1055
KR+RD AP++
Sbjct: 695 KRQRD---APDS 703
>gi|224070440|ref|XP_002303150.1| predicted protein [Populus trichocarpa]
gi|222840582|gb|EEE78129.1| predicted protein [Populus trichocarpa]
Length = 464
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/432 (76%), Positives = 379/432 (87%)
Query: 661 GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAE 720
GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD+IRVKHMI QG AE
Sbjct: 11 GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMIIQGQAE 70
Query: 721 QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKK 780
QSP+T G R N+ +S R+LE NTENLLRMVSY ENDVDCRRLLQL+HFGEKFD+ +C
Sbjct: 71 QSPWTAGCGRNNMKSSDRILEKNTENLLRMVSYSENDVDCRRLLQLLHFGEKFDAGNCGN 130
Query: 781 TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
TCDNCSKIK+ +E+DVT++AK+LVELVKLTGQ FSSSHILEV+RGSL+Q+VK+HRHE LS
Sbjct: 131 TCDNCSKIKTLVERDVTESAKQLVELVKLTGQHFSSSHILEVYRGSLSQFVKRHRHENLS 190
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
LHGAGKHLAK EASRILRHLVIEDFL E+VKKSD YGSVSSVLKVN+SKAH L G Q +
Sbjct: 191 LHGAGKHLAKGEASRILRHLVIEDFLAEDVKKSDFYGSVSSVLKVNESKAHKLCSGGQRI 250
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
VLRFPS++ ++K KS+ TPAKGSL+SGKLSP + +P+QPQ+EVDLNLSAKL+S+LRML
Sbjct: 251 VLRFPSSVKASKQGKSEATPAKGSLMSGKLSPPQAGSPAQPQSEVDLNLSAKLFSALRML 310
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
RT L+KEAG+GVMAYHIFGNATLQH+SKR+PRT+EELLEINGIGKAKVSKYG R+LETIE
Sbjct: 311 RTALLKEAGDGVMAYHIFGNATLQHMSKRIPRTKEELLEINGIGKAKVSKYGDRVLETIE 370
Query: 1021 STIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNK 1080
STI+E+ K D+N S SN+S+DS KRRRD ++A N N ++D+FTKST RSKKR + QNK
Sbjct: 371 STIREYNKGDRNSSGSNESSDSIKRRRDASKALNGNMEEEDEFTKSTGRSKKRTATRQNK 430
Query: 1081 TVEVINHNEPDS 1092
EV N EP S
Sbjct: 431 GSEVHNSMEPVS 442
>gi|168052509|ref|XP_001778692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669907|gb|EDQ56485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 521
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/542 (58%), Positives = 386/542 (71%), Gaps = 59/542 (10%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
++ NNKK FGN SFR NQREIINATMSG DVFVLMPTGGGKSLTYQLPA+ G+TLV+S
Sbjct: 2 MQVNNKKFFGNKSFRLNQREIINATMSGRDVFVLMPTGGGKSLTYQLPAICSAGVTLVVS 61
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PLVSLI DQIMHL +ANIPA +LSG MEW EQ EILR L++ YKLLYVTPEK+A+SD
Sbjct: 62 PLVSLIMDQIMHLSEANIPAAYLSGTMEWQEQNEILRNLDAGV--YKLLYVTPEKIARSD 119
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L + L SL + LLARIV+DEAHCVSQWGHDFRPDYQ LG+ K++FP+ P++ALTATAT
Sbjct: 120 RLSQHLTSLYDQRLLARIVVDEAHCVSQWGHDFRPDYQNLGVFKERFPDVPLIALTATAT 179
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWM------------------------------ 590
SVKEDVV+AL L CIIFRQ+FNRPNL
Sbjct: 180 LSVKEDVVRALKLTRCIIFRQTFNRPNLRYEVLPKSKKCLEDIDKFIRERHPNESGIIYC 239
Query: 591 ----DCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSK 646
DCEKV E+L+ E GHK AFYHG +DP +R++VQ+ WSK
Sbjct: 240 LSRSDCEKVTEKLR-------------------EFGHKVAFYHGQMDPDERSYVQRMWSK 280
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
DE+NIICATVAFGMGINKPDVRFVIHHSLPKS+EGYHQE GRAGRD +SC+LYY+Y+D
Sbjct: 281 DEVNIICATVAFGMGINKPDVRFVIHHSLPKSLEGYHQESGRAGRDNLPASCILYYTYAD 340
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
IR+KHM++QG AE N S + L TN +NL RM+ YC+ND+DCRR LQL
Sbjct: 341 SIRLKHMLTQGAAELGSTGSSFRNHNTVTSNQ-LSTNLDNLNRMIGYCQNDIDCRRSLQL 399
Query: 767 VHFGE-KFDSAHCKKTCDNCSKI--KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVF 823
HFGE FD + CK TCDNC+++ +E+DV++TA++LV+LV GQ+ S +HI++VF
Sbjct: 400 AHFGEMDFDVSSCKGTCDNCARMGNSGSVEEDVSETARQLVQLVGAMGQRSSMTHIVDVF 459
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVL 883
RGSLNQ VKK H+ L LHGAGK K+E RI++ L+ + E+V KSD YG +SS++
Sbjct: 460 RGSLNQQVKKMGHDQLDLHGAGKKFTKTEVERIMQQLLTGNIFREDVNKSDYYGGLSSII 519
Query: 884 KV 885
KV
Sbjct: 520 KV 521
>gi|413935533|gb|AFW70084.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
Length = 750
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 342/707 (48%), Positives = 435/707 (61%), Gaps = 89/707 (12%)
Query: 4 QIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSS 63
+IQ RL + +EKAW +L + Q + ++Y+RPGLS D R ++
Sbjct: 58 KIQGPERLQAPLIEKAWRSLCNTQAACKSYLRPGLSAKARDCD---------RGHARTYG 108
Query: 64 DGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNV--RDAGAGKGLRG-QNE--IKA 118
+GS + M+ G++I ++ + + L NN + G +R QN ++
Sbjct: 109 EGSYNTNKMST-VPGNRI-LSMESTGQPSERVSLQNNSSHQTVGICSSMRSHQNNHVVQE 166
Query: 119 SVVANAHFKFSDGFGNHTTEAGQIDESAEVLA--NKID--DDEILETIDVDQIVMEHYHS 174
+ A + F+ T A +A+ + +K D DD+IL TIDVDQIVMEHY +
Sbjct: 167 DMRATNQYNFA-----RTNAALHQSMAADNMCSYDKFDAMDDDILATIDVDQIVMEHYQA 221
Query: 175 SCTPKPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKD 234
+ P+ S S S TP DE LP EL +CNH CKL C E +H+Q+MKD
Sbjct: 222 TNAPRGSASHNMS-TPPGNKCSVNGMDEANLPRELSELCNHQCKLAFCREAMTHLQEMKD 280
Query: 235 MLIAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYR----QAEERQKSHFSAST 290
L+A++NELLD+ L+P +++L + RL L K +QLLE + Q EERQ SH AST
Sbjct: 281 ELLAVANELLDDDGELNPQHSQELHKRRLHLKKLVQLLEDHMTRSAQDEERQISHSMAST 340
Query: 291 TRTYQYETPQP--AVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVE 348
T T Q+ P + +D RF +QV++ N + S +S D L V
Sbjct: 341 TSTQQHLPPMTPGSTFTMDSNRFQSQVYVGNGPRD-SDLCYSPAPYSCSDNLSTPLNSVW 399
Query: 349 REPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSG 408
+ + PK+I +NY EGS D+KWSS +FPWTK+LEA N+ FGNHSFRPNQREIINATMSG
Sbjct: 400 KS-YTPKVIDINYTEGSGDRKWSSTNFPWTKELEAKNRNKFGNHSFRPNQREIINATMSG 458
Query: 409 HDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNME 468
HDVFVLMPTGGGKSLTYQLPALI G+TLV+ PLVSLIQDQIMHL QANIPAT+LSGN++
Sbjct: 459 HDVFVLMPTGGGKSLTYQLPALISSGLTLVVCPLVSLIQDQIMHLSQANIPATYLSGNLD 518
Query: 469 WTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQ 528
W+EQQEI+++L S C+YKLLYVTPEK+AKS L R L++LN++ L+RIVIDEAHCVSQ
Sbjct: 519 WSEQQEIMKDLMS--CRYKLLYVTPEKIAKSGALSRLLDNLNSQGHLSRIVIDEAHCVSQ 576
Query: 529 WGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL 588
WGHDFRPDY+ LG+LKQ FP TPVLALTATATA VKEDVVQAL L NCI+F+QSFNR NL
Sbjct: 577 WGHDFRPDYKSLGVLKQNFPKTPVLALTATATARVKEDVVQALALENCIVFKQSFNRANL 636
Query: 589 ----------------------------------WMDCEKVAERLQVGLSYGHFFLLKEF 614
MDCEKVAE+L+
Sbjct: 637 RYYLRPKTKKCVEDIDLFIRTNHSKECGIIYCLSRMDCEKVAEKLR-------------- 682
Query: 615 YVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
+CGHK + YHGS+DP R +QK WSKD+INIICATVAFGMG
Sbjct: 683 -----DCGHKVSHYHGSMDPMDRTHIQKLWSKDKINIICATVAFGMG 724
>gi|357445429|ref|XP_003592992.1| ATP-dependent DNA helicase Q1, partial [Medicago truncatula]
gi|355482040|gb|AES63243.1| ATP-dependent DNA helicase Q1, partial [Medicago truncatula]
Length = 556
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/550 (55%), Positives = 359/550 (65%), Gaps = 72/550 (13%)
Query: 4 QIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSS 63
Q QN A+V+KAW LS LQ+S R+Y+ G S V H S Q S
Sbjct: 44 QGQNVQSSQRAQVDKAWSALSRLQLSSRSYVPIGKSVKV----TPQFHENRTTTSFQGSY 99
Query: 64 DGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKASVVAN 123
+ +K + P D A V N
Sbjct: 100 ENNKLNHP-------------------------------DVAA-----------TPTVIN 117
Query: 124 AHFKFSDGF-GNHTTEAGQIDESAEVLANKIDDDEI--LETIDVDQIVMEHYHSSCTPKP 180
+ D NHT GQ +ES + +A+ I+ D+ LE++D+DQIV E Y S+CTP+P
Sbjct: 118 HTSRVVDSLVNNHTKYTGQTNESTKCVADTINIDDDDILESMDLDQIV-EKYQSTCTPQP 176
Query: 181 SISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAIS 240
+S+ P TP A D FA Q +T LPPELC C HG KLG+CPE +SH+Q+ KD LIAIS
Sbjct: 177 PMSKFPPFTPTADKDNFAGQGDTFLPPELCLNCIHGYKLGICPEAASHLQEFKDNLIAIS 236
Query: 241 NELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQA----EERQKSHF--SASTTRTY 294
NEL+DN NLS Q KLRQ+R QL+ QIQ LE Y + EERQKS+F S + ++
Sbjct: 237 NELIDNVENLSSVQIAKLRQDRSQLNNQIQQLEKYIHSSNLEEERQKSNFVTSMAPPTSF 296
Query: 295 QYETPQPAVLKIDPI------RFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVE 348
YETPQ V+ P+ R+D QV++ YG + +S S G+ S PVE
Sbjct: 297 VYETPQRNVISSGPVISSGLNRYDDQVYM-----DYGTYGTSYQS-----SCGMPSGPVE 346
Query: 349 REPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSG 408
REPFIPKII+VNYIEGS D++WSS DF WTK+LE NNKKVFGNHSFRPNQRE+INATMSG
Sbjct: 347 REPFIPKIIEVNYIEGSGDKRWSSRDFSWTKELEVNNKKVFGNHSFRPNQREVINATMSG 406
Query: 409 HDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNME 468
DVFVLMPTGGGKSLTYQLPALI PGITLVISPLVSLIQDQIMHLLQANI A +LS N+E
Sbjct: 407 CDVFVLMPTGGGKSLTYQLPALINPGITLVISPLVSLIQDQIMHLLQANITAAYLSANLE 466
Query: 469 WTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQ 528
W EQQEILRELNSDYCKYKLLYVTPEKV +SDVLLRQLESL+ RELL+RIVIDEAHCVSQ
Sbjct: 467 WAEQQEILRELNSDYCKYKLLYVTPEKVGRSDVLLRQLESLHGRELLSRIVIDEAHCVSQ 526
Query: 529 WGHDFRPDYQ 538
WGHDFRPDYQ
Sbjct: 527 WGHDFRPDYQ 536
>gi|384253210|gb|EIE26685.1| ATP-dependent DNA helicase, partial [Coccomyxa subellipsoidea
C-169]
Length = 513
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/543 (47%), Positives = 336/543 (61%), Gaps = 68/543 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L N+ FGN SFRPNQ E INAT+ G+D FVLMPTGGGKSL YQLPAL+ G+T+VIS
Sbjct: 1 LAIANEDFFGNASFRPNQLEAINATIKGNDCFVLMPTGGGKSLCYQLPALLTNGVTVVIS 60
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PLVSLIQDQ+ HL QA I +LSG ++ + + I++ L ++L+VTPEKVA+SD
Sbjct: 61 PLVSLIQDQVFHLQQAGIACGYLSGTQDYEDSRSIMQRLQQTPPDIRVLFVTPEKVARSD 120
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L+R L+ L++R LL R+ +DEAHCVSQWGHDFRPDY+GL + K+++P P+LALTATAT
Sbjct: 121 YLMRTLDVLHSRRLLDRVAVDEAHCVSQWGHDFRPDYKGLSVFKRRYPMVPLLALTATAT 180
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWM------------------------------ 590
V+ DVVQ L L +C++FR SFNR NL
Sbjct: 181 PRVQHDVVQQLSLKHCVVFRSSFNRQNLRYGKFDDAIKEMEDRIARNFCHHGRVQCGIVY 240
Query: 591 -----DCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWS 645
DCEKVA LQ S G F YH ++ +R VQ W+
Sbjct: 241 CLSRNDCEKVAAELQ-EYSRGCVF-----------------HYHAALTQQEREEVQANWT 282
Query: 646 KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYS 705
D + II AT+AFGMGINKPDVRFV+H S+PKS+EGYHQE GR GRDG+ ++C+LYYSY+
Sbjct: 283 HDRMQIIVATIAFGMGINKPDVRFVMHFSVPKSLEGYHQETGRGGRDGKVATCILYYSYA 342
Query: 706 DFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
D +R++HM+ Q EQ+ +P L+ N ++L M++YCE V+CRR +
Sbjct: 343 DAVRMRHMLKQSAEEQNT-SPAQ-----------LQCNMDSLNHMIAYCEEQVECRRSVL 390
Query: 766 LVHFGEKFDSAHCKKTCDNCSKI--KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVF 823
L HFGE FD C TCD C+ + F ++D+T A +V LV+ Q S SH+++VF
Sbjct: 391 LAHFGESFDVKRCHGTCDVCASRNGQEFEQRDLTAEALAVVRLVRAVKQHGSLSHVVDVF 450
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD-VYGSVSSV 882
RG+ + VK H L HGAGK L+K+EA R+LR +V+ L EE ++D YG V S
Sbjct: 451 RGANTKAVKDRGHAQLPDHGAGKALSKNEALRLLRKMVVVGVLSEETFRADNQYGGVMSH 510
Query: 883 LKV 885
L V
Sbjct: 511 LSV 513
>gi|328865354|gb|EGG13740.1| hypothetical protein DFA_11501 [Dictyostelium fasciculatum]
Length = 1329
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/664 (40%), Positives = 389/664 (58%), Gaps = 61/664 (9%)
Query: 362 IEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGK 421
I+ +++ K+S+ FPWT + N ++FGN SFR NQ EIINA M G+DVFVLMPTGGGK
Sbjct: 594 IQETDNSKFSA-KFPWTDEARRINSELFGNASFRHNQLEIINAAMDGNDVFVLMPTGGGK 652
Query: 422 SLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS 481
SL YQ+PA + G+T++ISPL+SLIQDQ+ L A L+ + E++EI ++ S
Sbjct: 653 SLCYQIPAYMNQGLTVIISPLISLIQDQVTFLKGMGYMARSLTSATDADEKREIYADIKS 712
Query: 482 DYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLG 541
+ KLLY+TPE++ + ++ +L +R++ AR++IDEAHCVSQWGHDFRPDY+ L
Sbjct: 713 TDPQTKLLYLTPERIVQDQGMMGIFSNLYSRQMFARVIIDEAHCVSQWGHDFRPDYKELS 772
Query: 542 ILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQ 600
+LK FP P+LALTATAT VK DV+ LG+ + + F+QSFNRPNL + +K E ++
Sbjct: 773 VLKSNFPRLPILALTATATERVKADVIANLGMRSSVCFKQSFNRPNLTFAVMKKTKEVIE 832
Query: 601 VGLSYGHFFLLKEFYVVS---LECGHKAA-FYHGSIDPAQRAFVQKQWSKDEINIICATV 656
S+ +K+ Y S + C ++ FYHGS+D R VQ++W++D + IIC+T+
Sbjct: 833 SIASF-----IKKTYPKSSGIVYCLRLSSDFYHGSMDAGDRQRVQERWTRDRVKIICSTI 887
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGINKPDVRFVIHHSLPK++EGY+QE GRAGRDG+ S C+LYY+Y D R + ++
Sbjct: 888 AFGMGINKPDVRFVIHHSLPKTLEGYYQESGRAGRDGKPSHCLLYYAYKDKFRYELLM-- 945
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
Q TP N+ ENL R+V+YCEN +DCRR LQL + GE F+
Sbjct: 946 ----QESNTPKENK--------------ENLGRVVAYCENSIDCRRKLQLSYLGEDFNPK 987
Query: 777 HCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+C KTCDNC + +VTD A L ++V Q+ S + +L++F+GS + + +
Sbjct: 988 NCLKTCDNCMSSSAVSLTNVTDDAINLAKIVMAVKQE-SLTMVLDIFKGSRRKELLTKNY 1046
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ + HG+GK + K A R+LR L++ L E V ++ YGS S V +K + L+ G
Sbjct: 1047 QDIEGHGSGKKIDKETADRLLRELIVRGVLREIVTRNPKYGS-SIVHYAVGAKVNELLRG 1105
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSS 956
+ L+F + S T + Q D +K +
Sbjct: 1106 SMTINLQF----------------------RAERSIDFETTAKKQQANAD----SKFRNF 1139
Query: 957 LRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
L +R +V + + YHI L+ L P T E+L ++N + ++ + G +
Sbjct: 1140 LLSVRQHIVDQTSD--FPYHILSEDGLEQLVTVKPSTLEQLKQVNFFTQRRIERLGKAFI 1197
Query: 1017 ETIE 1020
I+
Sbjct: 1198 SAIQ 1201
>gi|66802111|ref|XP_629849.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|60463228|gb|EAL61421.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 1259
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 284/679 (41%), Positives = 399/679 (58%), Gaps = 66/679 (9%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
+FPW++K+ N+ +FG H FR NQREIIN+T+ G+D FVLMPTGGGKSL YQ+PAL
Sbjct: 507 NFPWSQKIIDINRSMFGFHVFRENQREIINSTLEGNDTFVLMPTGGGKSLCYQIPALYQK 566
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
G+T+VISPL+SLI DQ+ L PA LS + ++ +++ S+ K +LLY+TP
Sbjct: 567 GLTIVISPLISLINDQVEFLETLGYPAAALSSAVSSDAAIDVYKDIRSNSPKIRLLYLTP 626
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E+V KSD L+ L +L+ + L +RIVIDEAHCVSQWGHDFRPDY+ L IL++KFP P+L
Sbjct: 627 ERVVKSDSLIEILANLDQKGLFSRIVIDEAHCVSQWGHDFRPDYKELSILRRKFPKVPIL 686
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY-------- 605
ALTATAT V+ DV+ L + N + F+QSFNRPNL K +++ +S
Sbjct: 687 ALTATATERVRNDVIYNLSMRNPVCFKQSFNRPNLIYQVLKKTKQVVDDMSKFIHSTYPD 746
Query: 606 --GHFFLLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAF 658
G + + ++ ++ E AA YH ++ +RA VQ W K I +I AT+AF
Sbjct: 747 KSGIVYCISKYDCENVAKRLRELKISAAHYHAGLENDERAKVQANWQKGRIKVIVATIAF 806
Query: 659 GMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGV 718
GMGINK DVRFVIHHS+PKS+EGY+QE GRAGRDG S C+LY+S++D +R +I
Sbjct: 807 GMGINKADVRFVIHHSVPKSLEGYYQESGRAGRDGGISHCLLYFSWADKLRNDLLI---- 862
Query: 719 AEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC 778
Q+ FT G +S ET ++L +MV+YCEN+ DCRR LQL +FGE F+ + C
Sbjct: 863 --QNSFTSGQ-----GSSHNTRETR-DSLNKMVNYCENETDCRRQLQLAYFGENFEKSGC 914
Query: 779 KKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV--KKHRH 836
KKTCDNC KDVT+ +K LV+ +K G +S+ I+++F+GS + V K +
Sbjct: 915 KKTCDNCISTLETTRKDVTEESKNLVKTIKALGSD-TSNLIIDIFKGSKGKKVLEKCAQS 973
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+LHG GK+ K E RIL H ++ D +++E + YG S L V S A NL+
Sbjct: 974 GITNLHGIGKNWQKHEIERIL-HQLLRDNILKETISQNPYGGTYSHLSVG-SYADNLLRN 1031
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQ-------PQNEV---- 945
++NV L F S TPAK ++ + K S + P N V
Sbjct: 1032 QKNVTLSFRS------------TPAKKTVSAAKKKKSSKNNEDDEEEEDEVPTNFVIIQN 1079
Query: 946 -----DLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEI 1000
D NL A+L LR L+ E + +IF T+ + + P+T +EL +
Sbjct: 1080 KTTKTDANLVARL-EKLRQDLALI-----ENIQETYIFSRDTIDDILRVKPKTIKELKGL 1133
Query: 1001 NGIGKAKVSKYGVRLLETI 1019
G+ K+ +YG +++ I
Sbjct: 1134 TGLPSQKIDRYGKSIIQAI 1152
>gi|355336772|gb|AER57871.1| ATP-dependent DNA helicase RecQ family protein [Acytostelium
subglobosum]
Length = 1147
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 282/673 (41%), Positives = 398/673 (59%), Gaps = 60/673 (8%)
Query: 366 NDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTY 425
N KW+ + WT ++E N+ VFGN S+R NQ EIINA MSGHDVFVLMPTGGGKSL Y
Sbjct: 464 NATKWAG-KYSWTDEVERINRTVFGNRSWRKNQVEIINACMSGHDVFVLMPTGGGKSLCY 522
Query: 426 QLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK 485
Q+PA+ G+T++ISPL+SLIQDQ+M L PA L+G + +I R+L
Sbjct: 523 QIPAMCNEGVTIIISPLISLIQDQVMLLQTLAYPAAALTGTTSSEDVTQIYRDLRQTPPT 582
Query: 486 YKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQ 545
KLLY+TPEKV +S ++ +LN LLAR VIDEAHCVSQWGHDFRP+Y+ L +LK
Sbjct: 583 LKLLYLTPEKVVQSPAIMDLFRNLNNNGLLARAVIDEAHCVSQWGHDFRPNYKELKLLKT 642
Query: 546 KFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL--QVGL 603
+FP+ P+LALTATAT VK+DV+ L + N I F+QSFNRPNL K ++++ +
Sbjct: 643 EFPSLPILALTATATERVKKDVIFNLHMKNPITFKQSFNRPNLQYAVVKKSKKIVDDIAE 702
Query: 604 SYGHFFLLKEFYVVSL---EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
F+ K V + +C G +A FYH +++P +R Q+ W++D I
Sbjct: 703 FINKFYPGKSGIVYCISRNDCVTVASELRKKGLRANFYHANMEPDERQRTQESWTRDRIK 762
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
II +T+AFGMGINKPDVRFVIHHSLPKS+EGY+QE GRAGRDG S C+LYYS+ D R
Sbjct: 763 IIVSTIAFGMGINKPDVRFVIHHSLPKSLEGYYQESGRAGRDGNLSHCILYYSFGDKFRQ 822
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
+ +I + ++ + N ENL R+V YCEN VDCRR LQL + G
Sbjct: 823 EVLIKN---------------STGSTHASIRENMENLNRIVGYCENPVDCRRKLQLQYLG 867
Query: 771 E-KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQ 829
E FD CKKTCDNC +DVT+ A+ L+++V+ + + I ++++GS N+
Sbjct: 868 EDSFDKEMCKKTCDNCLSTDPITRRDVTEDARTLLKIVQQAKDEPIGT-IKDIYKGSKNK 926
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSK 889
+ + ++ L HGAGK E RIL +++ D L E++ ++ Y ++S + KV ++
Sbjct: 927 RMIERKYVDLPQHGAGKSADPHEVDRILHQMILMDILEEDI-IANAYRTISHI-KVG-TR 983
Query: 890 AHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPS--RNDTPSQPQNEVDL 947
A L+ G + +V+ F N++K KG + L+ S N TP+
Sbjct: 984 ARGLMSGAEKIVMEFR---NNSK--------TKGKTVMEDLTKSVVVNKTPAD------- 1025
Query: 948 NLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAK 1007
+ KL L +R+ L +E + YHI N ++ L+ P+TE EL +I+ +
Sbjct: 1026 --TEKLKQYLYDVRSALGEE--HKLETYHIIPNTSIDELAVSKPQTEAELEKISYFTSIR 1081
Query: 1008 VSKYGVRLLETIE 1020
+ KYG L+ I+
Sbjct: 1082 IQKYGAAFLKAIK 1094
>gi|328725542|ref|XP_001947924.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 287/691 (41%), Positives = 397/691 (57%), Gaps = 75/691 (10%)
Query: 369 KWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLP 428
++S ++P +++L + FG H+FRPNQ E INA + GHD FVLMPTGGGKSL YQLP
Sbjct: 430 EFSKTNYPHSRELFTVFRSTFGLHNFRPNQLETINAALLGHDCFVLMPTGGGKSLCYQLP 489
Query: 429 ALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKL 488
A+I G+TLVISPL SL+ DQ L +IP L GNM+ E+ I +L K+
Sbjct: 490 AVISKGVTLVISPLKSLVIDQTEKLKSLDIPTAHLLGNMKPEEENIIFTKLCMSEPGLKM 549
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPEK+A S L + L +L+ R LAR+VIDEAHCVS WGHDFRPDY+ LG ++K+P
Sbjct: 550 LYVTPEKIAASMKLGQILNNLHCRGKLARLVIDEAHCVSHWGHDFRPDYKRLGEFRKKYP 609
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHF 608
+ P++ALTATAT V+EDV+ L + +F SFNRPNL KV +
Sbjct: 610 DVPIMALTATATTRVREDVLHQLQISGTKLFLSSFNRPNLLY---KVVPKKGKSAMAEIA 666
Query: 609 FLLKEFY------VVSL---EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEI 649
L+KE Y V L EC G KA YH + +R VQ +W +++
Sbjct: 667 NLIKEKYKNQSGIVYCLSRKECDNTATYMCNEGIKAISYHAGLSDPKRNDVQMKWITNKV 726
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
N++CAT+AFGMGI+KPDVR+V H+SLPKSIEGY+QE GRAGRDG+ S C LYYSY D R
Sbjct: 727 NLVCATIAFGMGIDKPDVRYVFHYSLPKSIEGYYQESGRAGRDGKTSHCFLYYSYQDMHR 786
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
++ +I + + + + + +NL R+VSYCEN DCRR LQL +F
Sbjct: 787 IRKLI---------------ELDDSGNHESKKVHMQNLFRIVSYCENKADCRRTLQLNYF 831
Query: 770 GEKFDSAHC----KKTCDNCSKIKSFIEKDVTDTAKKLVELVK-LTG-------QQFSSS 817
GE FD C + CDNC +F DVT+ + ++V+ +K + G F+
Sbjct: 832 GETFDDNKCISNKETACDNCQNKSAFKYIDVTEDSIEIVKTIKEICGSGGGSWNNNFTLI 891
Query: 818 HILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYG 877
HI+++F+GS NQ +K H H+ LSLHG GK + +A R++ LV+E +L EE+ S V
Sbjct: 892 HIIDIFKGSSNQKIKTHNHDKLSLHGRGKQWDRFDAERLMHKLVLEGYLREEMVASKV-D 950
Query: 878 SVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDT 937
+++ ++V +A LI R ++ L+ SA + KL+ T +K S
Sbjct: 951 IINAFVRVG-PEADKLI--RGSIKLKLASA-SKNKLNIE--TTSKNS------------- 991
Query: 938 PSQPQNEVDLNLSAKLYSSLR-MLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEE 996
+ P N V + K Y +L + R L A V + +Q +S +P TEEE
Sbjct: 992 -NTPVNTVLKEIQEKCYENLMDVCRGL---AASLNVNTNAVMTIQAIQEMSHSLPETEEE 1047
Query: 997 LLEINGIGKAKVSKYGVRLLE-TIESTIKEF 1026
+L+I G+ KA KYG +LLE T E+ +F
Sbjct: 1048 MLKIVGVTKANFEKYGRQLLEITQEAAANKF 1078
>gi|328697674|ref|XP_001952385.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 287/691 (41%), Positives = 397/691 (57%), Gaps = 75/691 (10%)
Query: 369 KWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLP 428
++S ++P +++L + FG H+FRPNQ E INA + GHD FVLMPTGGGKSL YQLP
Sbjct: 430 EFSKTNYPHSRELFTVFRSTFGLHNFRPNQLETINAALLGHDCFVLMPTGGGKSLCYQLP 489
Query: 429 ALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKL 488
A+I G+TLVISPL SL+ DQ L +IP L GNM+ E+ I +L K+
Sbjct: 490 AVISKGVTLVISPLKSLVIDQTEKLKSLDIPTAHLLGNMKPEEENIIFTKLCMSEPGLKM 549
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPEK+A S L + L +L+ R LAR+VIDEAHCVS WGHDFRPDY+ LG ++K+P
Sbjct: 550 LYVTPEKIAASMKLGQILNNLHCRGKLARLVIDEAHCVSHWGHDFRPDYKRLGEFRKKYP 609
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHF 608
+ P++ALTATAT V+EDV+ L + +F SFNRPNL KV +
Sbjct: 610 DVPIMALTATATTRVREDVLHQLQISGTKLFLSSFNRPNLLY---KVVPKKGKSAMAEIA 666
Query: 609 FLLKEFY------VVSL---EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEI 649
L+KE Y V L EC G KA YH + +R VQ +W +++
Sbjct: 667 NLIKEKYKNQSGIVYCLSRKECDNTATYMCNEGIKAISYHAGLSDPKRNDVQMKWITNKV 726
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
N++CAT+AFGMGI+KPDVR+V H+SLPKSIEGY+QE GRAGRDG+ S C LYYSY D R
Sbjct: 727 NLVCATIAFGMGIDKPDVRYVFHYSLPKSIEGYYQESGRAGRDGKTSHCFLYYSYQDMHR 786
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
++ +I + + + + + +NL R+VSYCEN DCRR LQL +F
Sbjct: 787 IRKLI---------------ELDDSGNHESKKVHMQNLFRIVSYCENKADCRRTLQLNYF 831
Query: 770 GEKFDSAHC----KKTCDNCSKIKSFIEKDVTDTAKKLVELVK-LTG-------QQFSSS 817
GE FD C + CDNC +F DVT+ + ++V+ +K + G F+
Sbjct: 832 GETFDDNKCISNKETACDNCQNKSAFKYIDVTEDSIEIVKTIKEICGSGGGSWNNNFTLI 891
Query: 818 HILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYG 877
HI+++F+GS NQ +K H H+ LSLHG GK + +A R++ LV+E +L EE+ S V
Sbjct: 892 HIIDIFKGSSNQKIKTHNHDKLSLHGRGKQWDRFDAERLMHKLVLEGYLREEMVASKV-D 950
Query: 878 SVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDT 937
+++ ++V +A LI R ++ L+ SA + KL+ T +K S
Sbjct: 951 IINAFVRVG-PEADKLI--RGSIKLKLASA-SKNKLNIE--TTSKNS------------- 991
Query: 938 PSQPQNEVDLNLSAKLYSSLR-MLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEE 996
+ P N V + K Y +L + R L A V + +Q +S +P TEEE
Sbjct: 992 -NTPVNTVLKEIQEKCYENLMDVCRGL---AASLNVNTNAVMTIQAIQEMSHSLPETEEE 1047
Query: 997 LLEINGIGKAKVSKYGVRLLE-TIESTIKEF 1026
+L+I G+ KA KYG +LLE T E+ +F
Sbjct: 1048 MLKIVGVTKANFEKYGRQLLEITQEAAANKF 1078
>gi|307103815|gb|EFN52072.1| hypothetical protein CHLNCDRAFT_36987 [Chlorella variabilis]
Length = 589
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/557 (44%), Positives = 352/557 (63%), Gaps = 43/557 (7%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+W F W+ +L N++ FGN FR NQ I+N+T+S DVFVLMPTGGGKSL YQL
Sbjct: 19 HRWRQETFAWSDELRVRNREAFGNRDFRHNQLGIMNSTLSNKDVFVLMPTGGGKSLCYQL 78
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PAL+ G+T+V+SPLVSLIQDQ+ HL IPA F+ G+M+W +Q ++ ++
Sbjct: 79 PALLSKGVTIVVSPLVSLIQDQVHHLTVLGIPAAFVGGSMDWKQQARPADFFSAVLRCWQ 138
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
+L++TPEK++ S L L+SL+ R LLAR+VIDEAHCVSQWGHDFR DY L + KQ+F
Sbjct: 139 VLFITPEKLSASGKLQSTLDSLHRRGLLARVVIDEAHCVSQWGHDFRKDYTRLSLFKQRF 198
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK-----VAERLQVG 602
P+ P+LALTATAT V+ DVV LG+ C++F+ SFNRPNL + + V E ++
Sbjct: 199 PSVPLLALTATATERVQHDVVAQLGINRCLVFKNSFNRPNLRYEVRRKKKGCVDEMAELI 258
Query: 603 LSYGHFFLLKEFYVVSL---ECGHKA-------------AFYHGSIDPAQRAFVQKQWSK 646
L FL K V L EC A YH S+ P +R VQ +W+
Sbjct: 259 LQN---FLKKCGIVYCLSRAECERVADDLEAKLADAIYPLHYHASLLPEEREAVQAEWTN 315
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQEC-GRAGRDGQRSSCVLYYSYS 705
++ II AT+AFGMGINK DVRFV+H+SLPKS+EGY Q GRAGRDG+++SC+LYY+Y
Sbjct: 316 GDVPIIVATIAFGMGINKCDVRFVLHYSLPKSLEGYLQASGGRAGRDGRKASCILYYTYG 375
Query: 706 DFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
D + +HMI E + P + +N E+L MV+YCE V+CRR+L
Sbjct: 376 DAAKSRHMIRTSAQENN--APDEQ----------IRSNMESLNAMVNYCEEQVECRRVLM 423
Query: 766 LVHFGE-KFDSAHCKKTCDNCSKI--KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEV 822
L HFGE F A C TCDNC+ +S ++ DV++ AKK+VE+++ G S SH+++V
Sbjct: 424 LSHFGEGSFTRAQCNGTCDNCNATAGQSLVQTDVSEAAKKVVEVIRCIGSA-SLSHVVDV 482
Query: 823 FRGSLNQYVKKHRHETLSLHGAGKHLAK--SEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
FRG+ V+K H ++++HG GK + EA R++R +V++ L+E+ + +++ +V
Sbjct: 483 FRGNNTVGVRKMGHGSVAVHGIGKAFCRNNGEAERLVRRMVVQGILLEQTHRPEMHLAVV 542
Query: 881 SVLKVNQSKAHNLIIGR 897
S L VN+ A +L+ G+
Sbjct: 543 STLAVNEMAAASLLSGQ 559
>gi|326431575|gb|EGD77145.1| RecQ5 [Salpingoeca sp. ATCC 50818]
Length = 1451
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 268/683 (39%), Positives = 376/683 (55%), Gaps = 75/683 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ G FRPNQ E NA ++G D F+LMPTGGGKSL YQLPAL G+T VISPL+SL
Sbjct: 713 KRQLGLRKFRPNQLEACNAALTGRDCFILMPTGGGKSLCYQLPALTKKGVTFVISPLISL 772
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
IQDQ+ L Q NI A L + Q +I R L KL+YVTPE++A S L +
Sbjct: 773 IQDQVSALRQNNIRALCLLSTQDQKTQSQIHRTLCMKDVLCKLIYVTPERIAASHRLKQT 832
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+++L R LL+R VIDEAHCVSQWGHDFRPDY+ L L++ FP P++ALTATAT VK
Sbjct: 833 MQNLYTRGLLSRFVIDEAHCVSQWGHDFRPDYKRLSCLREWFPTVPMMALTATATKRVKR 892
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE----------------RLQVGLSYGHFF 609
D++ L + N ++F QSFNRPNL+ + K + R + G+ Y
Sbjct: 893 DILMNLKMTNALVFEQSFNRPNLFYEVRKKSSYKKCVEEIGKEIRTRFRNKCGIVY--CL 950
Query: 610 LLKEFYVVSL---ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
KE VS + GHK+ FYH +DPA R Q QW ++NI+CAT+AFGMGI+KPD
Sbjct: 951 SRKECETVSQALNQSGHKSLFYHAGMDPADREAYQDQWQSGKVNIMCATIAFGMGIDKPD 1010
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM----ISQGVAEQS 722
VRFV H SLPKS+EGY+QE GRAGRDG+ + CVLYY+Y D + KHM I +G EQ
Sbjct: 1011 VRFVFHFSLPKSMEGYYQEAGRAGRDGKPAVCVLYYNYGD--KAKHMRLIDIGEGSYEQK 1068
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
E + NL ++V YCEN DCRR+ QL +FGE FD C+ C
Sbjct: 1069 ------------------EQHRSNLNQVVQYCENFQDCRRVQQLAYFGEDFDKRDCRNNC 1110
Query: 783 DNCSKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
D C + F ++DVTD A L + K L + +++VFRG+ V + +++++
Sbjct: 1111 DVCKSRRVFEQRDVTDAALNLTSIAKELARDNVTLIMVVDVFRGANTARVHRSGYDSVAQ 1170
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+G AK +A R+ R LV+++ L +E + +G++ S + + +A++L+ GR +V
Sbjct: 1171 FASGSKFAKHDAERLARKLVMDNVL-QESHQVTPHGAIVSYVTPGR-RAYDLLSGRMSV- 1227
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEV---DLNLSAKLYSSLR 958
KLS ++GK NDT + + V ++ KL +L
Sbjct: 1228 ----------KLS-----------MAGKKRRDNNDTNAGDADGVTSESERITEKLKEALI 1266
Query: 959 MLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLET 1018
LR + E V IF + + +++ P + E G+ AK+ YG R ++T
Sbjct: 1267 TLRKTIAAEQHCSVKT--IFTDLQIMKMAEERPLSLTAFGECEGVTDAKLKAYGRRFVDT 1324
Query: 1019 IESTIKEFYKTDKNGSSSNDSND 1041
+ + + T K+ S D
Sbjct: 1325 VLEHAQAWQSTGKDAGRSTHFKD 1347
>gi|413935535|gb|AFW70086.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
Length = 613
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 263/550 (47%), Positives = 346/550 (62%), Gaps = 36/550 (6%)
Query: 4 QIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSS 63
+IQ RL + +EKAW +L + Q + ++Y+RPGLS D R ++
Sbjct: 73 KIQGPERLQAPLIEKAWRSLCNTQAACKSYLRPGLSAKARDCD---------RGHARTYG 123
Query: 64 DGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNV--RDAGAGKGLRG-QNE--IKA 118
+GS + M+ G++I ++ + + L NN + G +R QN ++
Sbjct: 124 EGSYNTNKMST-VPGNRI-LSMESTGQPSERVSLQNNSSHQTVGICSSMRSHQNNHVVQE 181
Query: 119 SVVANAHFKFSDGFGNHTTEAGQIDESAEVLA--NKID--DDEILETIDVDQIVMEHYHS 174
+ A + F+ T A +A+ + +K D DD+IL TIDVDQIVMEHY +
Sbjct: 182 DMRATNQYNFA-----RTNAALHQSMAADNMCSYDKFDAMDDDILATIDVDQIVMEHYQA 236
Query: 175 SCTPKPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKD 234
+ P+ S S S TP DE LP EL +CNH CKL C E +H+Q+MKD
Sbjct: 237 TNAPRGSASHNMS-TPPGNKCSVNGMDEANLPRELSELCNHQCKLAFCREAMTHLQEMKD 295
Query: 235 MLIAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYR----QAEERQKSHFSAST 290
L+A++NELLD+ L+P +++L + RL L K +QLLE + Q EERQ SH AST
Sbjct: 296 ELLAVANELLDDDGELNPQHSQELHKRRLHLKKLVQLLEDHMTRSAQDEERQISHSMAST 355
Query: 291 TRTYQYETPQP--AVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVE 348
T T Q+ P + +D RF +QV++ N + S +S D L V
Sbjct: 356 TSTQQHLPPMTPGSTFTMDSNRFQSQVYVGNGPRD-SDLCYSPAPYSCSDNLSTPLNSVW 414
Query: 349 REPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSG 408
+ + PK+I +NY EGS D+KWSS +FPWTK+LEA N+ FGNHSFRPNQREIINATMSG
Sbjct: 415 KS-YTPKVIDINYTEGSGDRKWSSTNFPWTKELEAKNRNKFGNHSFRPNQREIINATMSG 473
Query: 409 HDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNME 468
HDVFVLMPTGGGKSLTYQLPALI G+TLV+ PLVSLIQDQIMHL QANIPAT+LSGN++
Sbjct: 474 HDVFVLMPTGGGKSLTYQLPALISSGLTLVVCPLVSLIQDQIMHLSQANIPATYLSGNLD 533
Query: 469 WTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQ 528
W+EQQEI+++L S C+YKLLYVTPEK+AKS L R L++LN++ L+RIVIDEAHCVSQ
Sbjct: 534 WSEQQEIMKDLMS--CRYKLLYVTPEKIAKSGALSRLLDNLNSQGHLSRIVIDEAHCVSQ 591
Query: 529 WGHDFRPDYQ 538
WGHDFRPDY+
Sbjct: 592 WGHDFRPDYK 601
>gi|213408509|ref|XP_002175025.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
gi|212003072|gb|EEB08732.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
Length = 1283
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 269/721 (37%), Positives = 398/721 (55%), Gaps = 79/721 (10%)
Query: 362 IEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGK 421
I ND + S +PW+++L + F FR NQ E IN T++G DVFVLMPTGGGK
Sbjct: 451 IPSPNDPQMS---YPWSRELMHTLRTKFQLKGFRKNQIEAINGTLAGKDVFVLMPTGGGK 507
Query: 422 SLTYQLPALI----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILR 477
SL YQLPA++ G+TLVISPL+SL+QDQ+ HL + NIPA LSG E+++++
Sbjct: 508 SLCYQLPAVMETGNSRGVTLVISPLLSLMQDQLEHLRKLNIPALPLSGEQPSDERKQVIS 567
Query: 478 ELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDY 537
L + + KLLYVTPE +A + + R LESL R+LLARIVIDEAHCVS WGHDFRPDY
Sbjct: 568 FLMAKKVQVKLLYVTPEGLASNGAISRVLESLYTRKLLARIVIDEAHCVSHWGHDFRPDY 627
Query: 538 QGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC---EK 594
+ LGIL+ K+ PV+ALTATA VK+DV+ L + NCI + SFNRPNL+ + +
Sbjct: 628 KQLGILRDKYRGVPVMALTATANEIVKKDVITTLRMENCIEMKSSFNRPNLYYEIKPKKD 687
Query: 595 VAERLQVGLSYGHFFLLKEFYVVSL------------ECGHKAAFYHGSIDPAQRAFVQK 642
V + +S G Y +S E G KA YH +D A+R +Q
Sbjct: 688 VFAEMHRFISNGRLDQSGIIYCLSRTSCEQVAAKLRNEYGLKAWHYHAGLDKAERQRIQS 747
Query: 643 QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY 702
W +I AT+AFGMG++K DVR+VIHHS PKS+EGY+QE GRAGRDG+ + C+++Y
Sbjct: 748 SWQAGIYKVIVATIAFGMGVDKGDVRYVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFY 807
Query: 703 SYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRR 762
SY D I + +I+ G + E + L +++ +CEN DCRR
Sbjct: 808 SYKDSITFQKLITSGEGD----------------AETKERQRQMLRQVIQFCENKSDCRR 851
Query: 763 LLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEV 822
L +FGE FD A C + CD C + ++++KD++ A K + L+K + + ++++
Sbjct: 852 KQILSYFGESFDKALCNRGCDICCEGATYVKKDMSSYAIKAIGLLKRISGKTTLLQLMDI 911
Query: 823 FRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSS- 881
FRGS + + ++ + + G GK L + + R+ LV E ME V +++ G VS+
Sbjct: 912 FRGSRSARIVENGWDRIEGAGDGKTLNRGDTERLFHQLVAEGVFMERV-EANRRGFVSAY 970
Query: 882 VLKVNQSKAHNLIIGRQNVVLRFPSAINSTK-----LSKSDVTP---------AKGSLLS 927
V+ Q+ + ++ GRQ V+L S L++S+ P K S +S
Sbjct: 971 VIPGRQATVNAVLQGRQKVILEIKETSTSNSAPARTLTRSNSFPLRPLQRQVVEKQSTMS 1030
Query: 928 ------GKLSPSRNDT---PSQPQNEVDL-------NLSA-------KLYSSLRMLRTLL 964
++ S+ T P QP + ++L N++A + + L+ LR+ L
Sbjct: 1031 TFVHTADEIYDSQLPTTAPPMQPPSRINLDQLSMQQNMTAYEIDVMNRCLAELKQLRSNL 1090
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
+ A V + F + L ++ ++PR EL I+GI + + + G + L+ IE I
Sbjct: 1091 M--ALNDVRVSYYFTDTMLVDMAMKLPRNISELTNIHGIQRDRAERVGPQFLKVIEKYIA 1148
Query: 1025 E 1025
E
Sbjct: 1149 E 1149
>gi|328707887|ref|XP_001947908.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1128
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/683 (38%), Positives = 384/683 (56%), Gaps = 67/683 (9%)
Query: 369 KWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLP 428
+++ D+ ++ +L A KK FG FRPNQ E INA + GH+ F+LMPTGGGKSL YQLP
Sbjct: 374 EFTKIDYSFSWELLAVFKKTFGLRHFRPNQFEAINAALLGHNCFILMPTGGGKSLCYQLP 433
Query: 429 ALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKL 488
A+I GIT+VISPL SLI DQ L +IPA L ++ E+ I EL KL
Sbjct: 434 AVILKGITVVISPLKSLIIDQTQKLKSLDIPAAHLLSSITPDEENTIYSELWGADPGLKL 493
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPEKVA S+ L++ L +L+ R LLARIVIDEAHCVSQWGHDFRPDY+ LG+ KQ +
Sbjct: 494 LYVTPEKVAASNKLIQVLNNLHCRNLLARIVIDEAHCVSQWGHDFRPDYKRLGVFKQNYQ 553
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC---EKVAERLQVGLSY 605
N P++ALTATAT V++DV+ L + F SFNRPNL + + + L++
Sbjct: 554 NVPIMALTATATQRVRKDVLHQLNIEETKWFVSSFNRPNLVYEVIPKKGKSSLLEIAKLI 613
Query: 606 GHFFLLKEFYVVSL---EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINII 652
F + + + EC G KA YH + +R VQ QW+ ++ N++
Sbjct: 614 KSKFARQSGIIYCMTKKECDNTAIFMSGEGIKAVSYHAGLTDKKRNDVQMQWTSNKSNVV 673
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
CAT+AFGMGI+KPDVR+VIH+SLP+SIEG++QE GRAGRDG + C++YY+YSD R+K
Sbjct: 674 CATIAFGMGIDKPDVRYVIHYSLPQSIEGFYQESGRAGRDGDVAYCLIYYNYSDMHRIKK 733
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I G + + RF+ NL R+VSYCEN +DCRR +QL +F E+
Sbjct: 734 LIEIGGG--ATYETKKVRFH-------------NLCRIVSYCENKMDCRRAMQLNYFDEQ 778
Query: 773 FDSAHC----KKTCDNCSKIKSFIEKDVTDTAKKLVELVK---LTGQQFSSSHILEVFRG 825
FD A C K TCDNC S DVT+ + L+ V+ +G F+ +H +++F+G
Sbjct: 779 FDKAQCIANEKTTCDNCRIKHSIKIIDVTEESINLITAVQEICSSGNNFTFTHFVDIFKG 838
Query: 826 SLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK--KSDVYGSVSSVL 883
Q V H HE ++ G H + + R++ L++E +L EE+ KSD+ + +
Sbjct: 839 KKTQKVVLHGHEKSNIFGKALHWDRDDIERLIHKLILEGYLREEMIAFKSDIMNAYIRI- 897
Query: 884 KVNQSKAHNLIIGRQNVVLRFPSAIN-STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQ 942
+A L+ G L+ A++ T L +++ K S +
Sbjct: 898 ---GPEAEKLLTG----FLKLSLALSPKTNLIDNNIVSIKDSTV---------------- 934
Query: 943 NEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEING 1002
N + + K Y++L + L + A + ++ +S+ +P EE++L+I+G
Sbjct: 935 NPILEEIKEKCYTNLMEVCRGLAESLDISTNA--VMTIQAIRSMSQLMPTNEEDMLKIDG 992
Query: 1003 IGKAKVSKYGVRLLETIESTIKE 1025
+ K+ K+G LLE + E
Sbjct: 993 VTKSNFEKFGQPLLEITQQAAAE 1015
>gi|19114004|ref|NP_593092.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe 972h-]
gi|1175484|sp|Q09811.1|HUS2_SCHPO RecName: Full=ATP-dependent DNA helicase hus2/rqh1
gi|1019410|emb|CAA91177.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe]
gi|1684754|emb|CAA70577.1| DNA-helicase [Schizosaccharomyces pombe]
Length = 1328
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/710 (36%), Positives = 400/710 (56%), Gaps = 78/710 (10%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+K++ K F FR NQ E IN T+SG DVF+LMPTGGGKSL YQLPA+I
Sbjct: 501 YPWSKEVLGCLKHKFHLKGFRKNQLEAINGTLSGKDVFILMPTGGGKSLCYQLPAVIEGG 560
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G+TLVISPL+SL+QDQ+ HL + NIP+ LSG E+++++ L + KLLY
Sbjct: 561 ASRGVTLVISPLLSLMQDQLDHLRKLNIPSLPLSGEQPADERRQVISFLMAKNVLVKLLY 620
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
VTPE +A + + R L+SL R+LLARIVIDEAHCVS WGHDFRPDY+ LG+L+ ++
Sbjct: 621 VTPEGLASNGAITRVLKSLYERKLLARIVIDEAHCVSHWGHDFRPDYKQLGLLRDRYQGI 680
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC---EKVAERLQVGLSYGH 607
P +ALTATA VK+D++ L + NC+ + SFNRPNL+ + + + L +S GH
Sbjct: 681 PFMALTATANEIVKKDIINTLRMENCLELKSSFNRPNLFYEIKPKKDLYTELYRFISNGH 740
Query: 608 FFLLKEFYVVSL------------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Y +S + G KA YH ++ +R +Q +W II AT
Sbjct: 741 LHESGIIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVAT 800
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMG++K DVRFVIHHS PKS+EGY+QE GRAGRDG+ + C+++YSY D + + +I
Sbjct: 801 IAFGMGVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKDHVTFQKLIM 860
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
G + E + L +++ +CEN DCRR L +FGE FD
Sbjct: 861 SGDGD----------------AETKERQRQMLRQVIQFCENKTDCRRKQVLAYFGENFDK 904
Query: 776 AHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHR 835
HC+K CD C + ++I++D+T+ + + ++L+K + + ++++FRGS + + ++
Sbjct: 905 VHCRKGCDICCEEATYIKQDMTEFSLQAIKLLKSISGKATLLQLMDIFRGSKSAKIVENG 964
Query: 836 HETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSS-VLKVNQSKAHNLI 894
+ L G GK L + ++ R+ HLV E +E+V +++ G VS+ V+ Q+ ++++
Sbjct: 965 WDRLEGAGVGKLLNRGDSERLFHHLVSEGVFVEKV-EANRRGFVSAYVVPGRQTIINSVL 1023
Query: 895 IGRQNVVLRFPSA-----INSTKLSKSDVTPA------KGSLLSGKLSPSRNDT------ 937
G++ ++L + +S LS+S PA K + S S +
Sbjct: 1024 AGKRRIILDVKESSSKPDTSSRSLSRSKTLPALREYQLKSTTASVDCSIGTREVDEIYDS 1083
Query: 938 ---PSQP-----QNEVDL-NLSAKLYSS-------------LRMLRTLLVKEAGEGVMAY 975
P +P +N++DL LS + + S L++LR+ L+ V +Y
Sbjct: 1084 QMPPVKPSLIHSRNKIDLEELSGQKFMSEYEIDVMTRCLKDLKLLRSNLMAIDDSRVSSY 1143
Query: 976 HIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
F ++ L ++K++PR +EL EI+G+ K G + L+ I+ I E
Sbjct: 1144 --FTDSVLLSMAKKLPRNVKELKEIHGVSNEKAVNLGPKFLQVIQKFIDE 1191
>gi|330795187|ref|XP_003285656.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
gi|325084382|gb|EGC37811.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
Length = 529
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/545 (44%), Positives = 333/545 (61%), Gaps = 34/545 (6%)
Query: 385 NKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVS 444
NKK FG + FR NQREIIN+ + D FVLMPTGGGKSL YQ+P L G+T+V+SPL+S
Sbjct: 1 NKKTFGFNQFRENQREIINSVLDSKDTFVLMPTGGGKSLCYQIPGLYQQGVTIVVSPLIS 60
Query: 445 LIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLR 504
LI+DQ+ LL + PA L + + +++ R+L S+ K +LLYVTPE+VA ++ +
Sbjct: 61 LIEDQVKFLLALDYPAAALCSGITSDDAKKVFRDLRSNSPKTRLLYVTPERVASNETFMD 120
Query: 505 QLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
L L + RIVIDEAHCVSQWGHDFRPDY+ L IL++ FP+ P+LALTATAT V+
Sbjct: 121 ILGDLYQKGKFMRIVIDEAHCVSQWGHDFRPDYKELSILRKNFPSVPILALTATATEKVR 180
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDCEK--------VAERL--QVGLSYGHFFLLKEF 614
D++ L + + F+QSFNRPNL+ K +AE + Q G + L ++
Sbjct: 181 NDIILNLNMKKPVCFKQSFNRPNLYYHVMKKPKDVSKQMAEFIKKQYPDKSGIIYCLSKY 240
Query: 615 YV------VSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
++ E G K+A+YH ++ R VQ +W K I +I AT+AFGMGINKPDVR
Sbjct: 241 DCEKISGDLNTEYGIKSAYYHAGMEIHSRNQVQDRWQKGRIKVIVATIAFGMGINKPDVR 300
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV HHS+PKS+EGY+QE GRAGRDG +S C+LYY ++D +R++ +I E
Sbjct: 301 FVFHHSIPKSLEGYYQESGRAGRDGLKSHCILYYKWADKLRIETLIMLSSKENG------ 354
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
+N L+ + NL +MVSYCEND DCRR LQL +FGEKFD + C KTCDNCS
Sbjct: 355 THYN-------LKESKTNLNKMVSYCENDTDCRRSLQLSYFGEKFDKSKCGKTCDNCSLD 407
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHET--LSLHGAGK 846
EKDVT AK++V++V+ G + + I+++ RGS + +K SLHG K
Sbjct: 408 SPISEKDVTQEAKEIVKIVEKVGNTETLTTIVQILRGSGIKKIKDLVDSCGLKSLHGVKK 467
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+++ +I L+I L E V ++ YGS S + + + NL GR + ++ S
Sbjct: 468 SWKQTDIEKIAHELIIRGVLKELVTQNS-YGSTFSHIGLGDYR--NLANGRDTITIKIRS 524
Query: 907 AINST 911
ST
Sbjct: 525 DTKST 529
>gi|383859981|ref|XP_003705470.1| PREDICTED: Bloom syndrome protein homolog [Megachile rotundata]
Length = 1362
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 276/724 (38%), Positives = 400/724 (55%), Gaps = 79/724 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG +SFRPNQ + INA M G D FVLMPTGGGKSL YQLPAL+ PG+T+VISPL SL
Sbjct: 634 RQKFGLYSFRPNQLQAINAAMLGFDCFVLMPTGGGKSLCYQLPALLLPGVTIVISPLKSL 693
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
I DQ+ L +IPA LSG + + I REL+ KLLYVTPEK++ S
Sbjct: 694 ILDQVQKLTSLDIPAAHLSGTITDAQADAIYRELSKKDPALKLLYVTPEKISASQKFCNL 753
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L SL R LLA+ VIDEAHCVSQWGHDFRPDY+ L +L++ + ++ALTATAT V+
Sbjct: 754 LSSLYERGLLAKFVIDEAHCVSQWGHDFRPDYKRLKMLRENYTKVGMIALTATATPRVRT 813
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWM--------DCE-------KVAERLQVGLSYGHFFL 610
D++ LGL F SFNRPNL +C K + G+ Y
Sbjct: 814 DILHQLGLTRPKWFMSSFNRPNLRYSIITKKGKNCSDEVIAMIKTKYKNDCGIVYCLSRK 873
Query: 611 LKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
+ Y V + + G KA YH + R+ +Q +W +EI ++CAT+AFGMGI+KP+VRF
Sbjct: 874 ECDDYAVQMRKNGIKALGYHAGLTDNNRSNIQGRWISEEIKVVCATIAFGMGIDKPNVRF 933
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH +LPKSIEGY+QE GRAGRDG+ + C+L+Y+Y+D R++ MI E P
Sbjct: 934 VIHAALPKSIEGYYQESGRAGRDGENADCILFYNYADMHRIRKMI-----EMDNSNPD-- 986
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC----KKTCDNC 785
++TN +NL +MVS+CEN DCRR LQL +FGE FD C +CDNC
Sbjct: 987 ---------AIKTNIDNLFKMVSFCENKTDCRRSLQLNYFGEIFDRQQCISNKATSCDNC 1037
Query: 786 SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHIL----EVFRGSLNQYVKKHRHETLSL 841
F D TD AK++++ V+ Q S++ L ++F+GS +KK R L+
Sbjct: 1038 RNKDDFKMLDATDDAKQIMKAVREITQSRSANLTLVLLTDIFKGS---DIKKIRDAGLNK 1094
Query: 842 H---GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQ 898
H G G+ +++ R+L ++V++D+L E++ ++ + LK+ + + ++ R+
Sbjct: 1095 HPVYGRGRSWNRNDIERLLHYMVLKDYLQEQMYINNEI--TCAYLKIGPNASE--LMTRK 1150
Query: 899 NVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLR 958
++ + P I S+ + + T A S ++ K+ ++V L L + Y L
Sbjct: 1151 DIKVELP--IKSS--TGNSATVATVSTVTKKI------------DKVLLELQERCYKEL- 1193
Query: 959 MLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLET 1018
+ + V A I ++ +S+R+P E+ +LEI + +A KYG LL+
Sbjct: 1194 -MEVIKGIAGALEVSASSIMNMIAVRAMSQRLPDNEQAMLEIPHVTQANFDKYGKALLDI 1252
Query: 1019 IESTIKEFY---KTDKNGSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRAS 1075
+ E Y ++ SS++D +D G +N AP A G F S R +K S
Sbjct: 1253 TQKYAAEKYVLLNEEQAESSASDDDDGGW----DNSAP-AFAG---KFNGSQGRKRKGKS 1304
Query: 1076 KSQN 1079
+N
Sbjct: 1305 NYRN 1308
>gi|302851980|ref|XP_002957512.1| hypothetical protein VOLCADRAFT_68317 [Volvox carteri f.
nagariensis]
gi|300257154|gb|EFJ41406.1| hypothetical protein VOLCADRAFT_68317 [Volvox carteri f.
nagariensis]
Length = 544
Score = 441 bits (1134), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/499 (46%), Positives = 310/499 (62%), Gaps = 32/499 (6%)
Query: 397 NQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-PGITLVISPLVSLIQDQIMHLLQ 455
+Q IINAT+ G DVFVLMPTGGGKSL YQLPAL+ G+T+V+SPLVSLIQDQI HL +
Sbjct: 37 SQEAIINATLDGRDVFVLMPTGGGKSLCYQLPALMSDSGVTVVVSPLVSLIQDQIHHLRE 96
Query: 456 ANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELL 515
A I L G+ EW+E ++ + S +LL+VTPEKVA+SD L+R L+ L A L
Sbjct: 97 AGIGTAHLGGSQEWSEAAGVMESIRSGASDVRLLFVTPEKVARSDALVRLLDGLVAAGRL 156
Query: 516 ARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVN 575
R V+DEAHCVSQWGHDFRPDY+ L + K K+P P+LALTATAT V+ DV L + +
Sbjct: 157 DRCVVDEAHCVSQWGHDFRPDYRELAVFKSKWPRVPLLALTATATPRVQADVRLQLRIPD 216
Query: 576 CIIFRQSFNRPNLWMD--------------------CEKVAERLQVGLSYGHF-----FL 610
C++F+ SFNRPNL + ++V +R+Q G+ Y +
Sbjct: 217 CVVFKSSFNRPNLRYEVVRKSKAIVEDLKTLLLERFVDRVKKRVQCGIVYCQSRGECERV 276
Query: 611 LKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
+E V G AA YH ++ +R VQ +WS DE+ +I AT+AFGMGINKPDVR
Sbjct: 277 AEELRKVRQPNGRMLNAAHYHAALSHDEREQVQTRWSNDEVQVIVATIAFGMGINKPDVR 336
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FVIH SLPKS+EGYHQE GR GRDG + C+LYY+Y D + +HM++ S TPG
Sbjct: 337 FVIHFSLPKSLEGYHQETGRGGRDGAEAICLLYYNYGDAQKARHMLTTSAQCGSCTTPGG 396
Query: 729 NRFN-VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ V N L + R++ + E V+CRR+L + HFGE FD + C+ TCDNC
Sbjct: 397 VFWTRVCNLDHFLLSAVPFKARIIMFAEEQVECRRVLLMQHFGEAFDPSQCRGTCDNCKH 456
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+S D+T A +LV+L++ GQ++S+SH+++VFRGS + +K H L LHGAGK
Sbjct: 457 RQS---HDLTSMAVQLVDLIRSAGQKWSASHVVDVFRGSQAKEIKAAGHTELPLHGAGKS 513
Query: 848 LAKSEASRILRHLVIEDFL 866
L K ++ + D +
Sbjct: 514 LQKVRKGSKYMYMYMYDIV 532
>gi|157104176|ref|XP_001648286.1| blooms syndrome DNA helicase [Aedes aegypti]
gi|108880401|gb|EAT44626.1| AAEL004039-PA [Aedes aegypti]
Length = 1406
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 281/764 (36%), Positives = 405/764 (53%), Gaps = 96/764 (12%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
+ ++P ++++ + FG SFRPNQ ++INAT+ G+D FVLMPTGGGKSL YQLPA
Sbjct: 650 FDGMNYPHSQEMAELFRTKFGLQSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPA 709
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L+ G+T+V+SPL SLI DQ+ L +I A LSGN+ + E+Q I +L S K KLL
Sbjct: 710 LLTNGVTIVVSPLKSLILDQVNKLSSLDIEAAHLSGNISYAEEQRIYYDLQSPRPKMKLL 769
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK++ S L L+A + LAR VIDEAHCVS WGHDFRPDY+ L +L+++FP+
Sbjct: 770 YVTPEKISSSGRFQNVLSGLHAMKQLARFVIDEAHCVSAWGHDFRPDYKKLSVLREQFPS 829
Query: 550 TPVLALTATATASVKEDVVQALGL-VNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHF 608
P++ALTATA V+ DV++ L L + F SFNRPNL K R + G++
Sbjct: 830 IPIMALTATANPRVRVDVIKQLRLKSDTKWFLCSFNRPNL-----KYIVRPKQGVATKQE 884
Query: 609 F--LLKEFY---------VVSLEC----------GHKAAFYHGSIDPAQRAFVQKQWSKD 647
L+K+ Y + +C G A YH + +QR QK W D
Sbjct: 885 IIDLIKKKYPRASGIVYCLAKKDCDQLAAEMKSAGISAKSYHAGLSDSQRESTQKDWIAD 944
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
+ ++CAT+AFGMGI+KPDVR+VIHHS+PKSIEGY+QE GRAGRDG S+C+LYY+YSD
Sbjct: 945 KTKVVCATIAFGMGIDKPDVRYVIHHSIPKSIEGYYQEAGRAGRDGDFSTCILYYNYSDM 1004
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
+R + M+ F+ + + + NL RMV YCEN DCRR QL
Sbjct: 1005 LRFRKMMD---------------FDSSIPFEAKKVHVNNLFRMVDYCENVTDCRRSQQLN 1049
Query: 768 HFGEKFDSAHC----KKTCDNCSKIKSFIEKDVTDTAKKLVELVK--LTGQ-QFSSSHIL 820
+F E F C CDNC + DVTD + + V+ +G+ +F+ H++
Sbjct: 1050 YFAEHFTREQCLENRATACDNCLMQGEYKTMDVTDDCIAVAKSVRDLCSGRNRFTLLHLV 1109
Query: 821 EVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
E+F+GS + + ++ H HG K + + R++ LVIED+L E++ S+
Sbjct: 1110 EIFKGSEQKKIIENNHHKTPYHGRLKAWDRIDIQRLMHKLVIEDYLKEDLIFSNDIP--Q 1167
Query: 881 SVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQ 940
+ +K+ +K L+ N +R ++ + K K ++ G + KL D+ S
Sbjct: 1168 AYIKIG-TKIEKLM----NREVRVNFSVKTNKAGKKNLQVDVG--VEQKL-----DSQSA 1215
Query: 941 PQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEI 1000
Q + L + Y++L L T A V + L+ +++R+P TE E+L +
Sbjct: 1216 TQLK---ELQERCYNNL--LDTCRKLAADLNVTLASVMNMQALKAMAQRLPETEAEMLAL 1270
Query: 1001 NGIGKAKVSKYGVRLLETIESTIKEFY--------------KTDKNGSSSNDSND----- 1041
+ KA KYG LL+ ++ E + D GSS D D
Sbjct: 1271 PHVTKANFEKYGKHLLDITQNFAAEKIVLMLDAAEAAADNGEDDSEGSSDEDGTDWARLA 1330
Query: 1042 -----SG----KRRRDENEAPNANKGDDDDFTKSTARSKKRASK 1076
SG KRRR A K TKS AR+K +++
Sbjct: 1331 NEASSSGASGVKRRRSWGSAKRGAKRYRKGRTKSRARTKTTSTR 1374
>gi|291410501|ref|XP_002721547.1| PREDICTED: Bloom syndrome protein [Oryctolagus cuniculus]
Length = 1414
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 280/745 (37%), Positives = 399/745 (53%), Gaps = 84/745 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S +FP TK + K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 644 ERFQSLNFPHTKDMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 703
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA I PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 704 PACISPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEAASIYLQLSKKDPIIK 763
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 764 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 823
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L +V +F SFNR NL +KVA
Sbjct: 824 PSVPVMALTATANPRVQKDILTQLKIVRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 883
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 884 IRKHHPYDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDEVQHKWINQDGCQ 943
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S CVL+Y+Y D R+
Sbjct: 944 VICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRL 1003
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1004 KRLI---LMEKD--GNQHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1048
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKL--------------TG 811
E F+ CKK +CDNC K K F +DVTD K +V V+
Sbjct: 1049 ENGFNPNFCKKYSDVSCDNCCKTKDFKTRDVTDEVKNIVRFVQEHSSSQGARPARPLGPS 1108
Query: 812 QQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L EE+
Sbjct: 1109 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEELY 1162
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA L+ G V F NS+ + K AK S
Sbjct: 1163 INANDQAIAYVMPGN--KAQTLLSGHLKV--DFMETENSSSVKKQKALVAKVSQ------ 1212
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVP 991
+ EV +L + L + GV ++IF ATL+ L++ +
Sbjct: 1213 ----------REEVVKKCLGELTEVCKSLGKVF------GVHYFNIFSTATLRRLAESLS 1256
Query: 992 RTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENE 1051
E LL+I+G+ + K+ KYG ++ ++ E+ ++ S R E
Sbjct: 1257 SDPEVLLQIDGVTEDKLEKYGAEVIPILQK-YSEWTLPAEDASPRPSPPSRRDSGRSAPE 1315
Query: 1052 APNANKGDDDDFTKSTARSKKRASK 1076
AP + + +TAR+++R K
Sbjct: 1316 APEEDAPVSSRYFANTARNERRKRK 1340
>gi|3370996|dbj|BAA32001.1| mBlm [Mus musculus]
Length = 1416
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 265/686 (38%), Positives = 381/686 (55%), Gaps = 80/686 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ + S +FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 650 EHFQSLNFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 709
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 710 PACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIK 769
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 770 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 829
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 830 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 889
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 890 IRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQ 949
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S CVL+Y+Y D R+
Sbjct: 950 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRL 1009
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ + ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1010 KRLI---MMEKD------------GNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFG 1054
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKL-----------TGQQF 814
EK F+ CKK +CDNC K K + KDVTD K ++ V+ +F
Sbjct: 1055 EKGFNPDFCKKYPDVSCDNCCKTKDYKTKDVTDDVKNIIRFVQEHSSSPGTRNIGPAGRF 1114
Query: 815 SSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD 874
+ + ++++F GS + VK + G G ++ A R+ + L+++ L E++ +
Sbjct: 1115 TLNMLVDIFLGSKSAKVKS------GIFGKGTTYSRHNAERLFKKLILDKILDEDLYINA 1168
Query: 875 VYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR 934
++ V+ +KAH+++ G V F NS+ + K AK S
Sbjct: 1169 NDQPIAYVML--GTKAHSVLSGHLKV--DFMETENSSSIKKQKALVAKVSQ--------- 1215
Query: 935 NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTE 994
+ EV +L ++L + GV ++IF ATL+ L++ +
Sbjct: 1216 -------REEVVKKCLGELTEVCKLLGKVF------GVHYFNIFNTATLKKLAESLSSDP 1262
Query: 995 EELLEINGIGKAKVSKYGVRLLETIE 1020
E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1263 EVLLQIDGVTEDKLEKYGAEVIPVLQ 1288
>gi|110225360|ref|NP_001035992.1| Bloom syndrome protein homolog isoform 2 [Mus musculus]
gi|5921178|sp|O88700.1|BLM_MOUSE RecName: Full=Bloom syndrome protein homolog; Short=mBLM; AltName:
Full=RecQ helicase homolog
gi|3452495|emb|CAB10933.1| BLM protein [Mus musculus]
gi|162318414|gb|AAI57096.1| Bloom syndrome homolog (human) [synthetic construct]
Length = 1416
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/686 (38%), Positives = 381/686 (55%), Gaps = 80/686 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ + S +FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 650 EHFQSLNFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 709
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 710 PACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIK 769
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 770 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 829
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 830 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 889
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 890 IRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQ 949
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S CVL+Y+Y D R+
Sbjct: 950 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRL 1009
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ + ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1010 KRLI---MMEKD------------GNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFG 1054
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKL-----------TGQQF 814
EK F+ CKK +CDNC K K + KDVTD K ++ V+ +F
Sbjct: 1055 EKGFNPDFCKKYPDVSCDNCCKTKDYKTKDVTDDVKNIIRFVQEHSSSPGTRNIGPAGRF 1114
Query: 815 SSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD 874
+ + ++++F GS + VK + G G ++ A R+ + L+++ L E++ +
Sbjct: 1115 TLNMLVDIFLGSKSAKVKS------GIFGKGTTYSRHNAERLFKKLILDKILDEDLYINA 1168
Query: 875 VYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR 934
++ V+ +KAH+++ G V F NS+ + K AK S
Sbjct: 1169 NDQPIAYVML--GTKAHSVLSGHLKV--DFMETENSSSIKKQKALVAKVSQ--------- 1215
Query: 935 NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTE 994
+ EV +L ++L + GV ++IF ATL+ L++ +
Sbjct: 1216 -------REEVVKKCLGELTEVCKLLGKVF------GVHYFNIFNTATLKKLAESLSSDP 1262
Query: 995 EELLEINGIGKAKVSKYGVRLLETIE 1020
E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1263 EVLLQIDGVTEDKLEKYGAEVIPVLQ 1288
>gi|148675036|gb|EDL06983.1| Bloom syndrome homolog (human), isoform CRA_b [Mus musculus]
Length = 1417
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/686 (38%), Positives = 381/686 (55%), Gaps = 80/686 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ + S +FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 651 EHFQSLNFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 710
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 711 PACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIK 770
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 771 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 830
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 831 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 890
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 891 IRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQ 950
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S CVL+Y+Y D R+
Sbjct: 951 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRL 1010
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ + ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1011 KRLI---MMEKD------------GNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFG 1055
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKL-----------TGQQF 814
EK F+ CKK +CDNC K K + KDVTD K ++ V+ +F
Sbjct: 1056 EKGFNPDFCKKYPDVSCDNCCKTKDYKTKDVTDDVKNIIRFVQEHSSSPGTRNIGPAGRF 1115
Query: 815 SSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD 874
+ + ++++F GS + VK + G G ++ A R+ + L+++ L E++ +
Sbjct: 1116 TLNMLVDIFLGSKSAKVKS------GIFGKGTTYSRHNAERLFKKLILDKILDEDLYINA 1169
Query: 875 VYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR 934
++ V+ +KAH+++ G V F NS+ + K AK S
Sbjct: 1170 NDQPIAYVML--GTKAHSVLSGHLKV--DFMETENSSSIKKQKALVAKVSQ--------- 1216
Query: 935 NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTE 994
+ EV +L ++L + GV ++IF ATL+ L++ +
Sbjct: 1217 -------REEVVKKCLGELTEVCKLLGKVF------GVHYFNIFNTATLKKLAESLSSDP 1263
Query: 995 EELLEINGIGKAKVSKYGVRLLETIE 1020
E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1264 EVLLQIDGVTEDKLEKYGAEVIPVLQ 1289
>gi|167535712|ref|XP_001749529.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771921|gb|EDQ85580.1| predicted protein [Monosiga brevicollis MX1]
Length = 2199
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 276/754 (36%), Positives = 398/754 (52%), Gaps = 70/754 (9%)
Query: 372 SWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI 431
S++F + +L K+ FG H FRP+Q E +NA + G D FVLMPTGGGKSL YQLPA+
Sbjct: 588 SFEFEHSIELLKAFKQRFGLHRFRPHQLEAVNAALLGQDCFVLMPTGGGKSLCYQLPAVT 647
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYV 491
G+T+VISPL+SLIQDQ+ L I FLS EQ E+ R+L +D + LLY+
Sbjct: 648 SRGVTVVISPLISLIQDQVAGLQALGIRVLFLSSTQSRAEQNEVHRQLCADAVQDDLLYI 707
Query: 492 TPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 551
TPE++ KS ++ + ESL+AR LLAR VIDEAHCVSQWGHDFRPDY+ L I++Q FP P
Sbjct: 708 TPERL-KSSMMRQTFESLHARGLLARFVIDEAHCVSQWGHDFRPDYKELQIVRQWFPRVP 766
Query: 552 VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL-------- 603
++ALTATAT VKEDV+ LG+ + F+ SFNR NL+ + + L +
Sbjct: 767 LMALTATATPRVKEDVLNILGMQRAVTFQSSFNRTNLFYEVRPKKKSLFADIAAIVAKNR 826
Query: 604 -SYGHFFLL--KEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
S G + + ++ +L+ G KA YH +DP R+ VQ W++ +IICAT+A
Sbjct: 827 GSSGIVYCMSRRDAETTALDLQRRGIKALAYHAGLDPGLRSEVQDVWARSRADIICATIA 886
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGI+KPDVR+VIH +LPKS+EGY+QE GRAGRDGQ + C+L+Y+++D R + MI++
Sbjct: 887 FGMGIDKPDVRYVIHATLPKSMEGYYQEAGRAGRDGQPAQCILFYTFADKARHEFMINKS 946
Query: 718 VAE------------QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
+ S S V+E E L + +CRR Q
Sbjct: 947 DGDWRQREQHRFFLSLSLSLSLSLLLFFFLSCFVVEVQIEVALTLHFALGIISNCRRKQQ 1006
Query: 766 LVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSS----HILE 821
L +F E+FD+ C CD C K F EKDVT AK L +LV+ + +++
Sbjct: 1007 LAYFDEQFDARDCNDNCDVCKKGLVFEEKDVTTHAKSLAKLVEHGNPDGRTPITLIMVMD 1066
Query: 822 VFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSS 881
FRGS ++ + + LHG G L++++ R+ R LV+E +L EE YG+ ++
Sbjct: 1067 AFRGSRSKRIVETGLVNHELHGQGAGLSRTDVERLARKLVLEGYL-EEFHVDTAYGT-NT 1124
Query: 882 VLKVNQSKAHNLIIGRQNVVL----RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDT 937
+++++SKA +L+ GR ++L R KS++ A +
Sbjct: 1125 YVRLSRSKAGSLLGGRVRIMLSMEGRKAKKTAEAHQDKSEIAVAA-------------EL 1171
Query: 938 PSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEEL 997
SQPQN L L L L+ L+++ AG+ +F L ++ P T E
Sbjct: 1172 ASQPQN---LPL-------LTALKELVLELAGDSTKTRSVFTTHQLNLMTVARPLTLNEF 1221
Query: 998 LEINGIGKAKVSKYGVRLLETIESTIKE--------FYKTDKNGSSSNDSNDSGKRRRDE 1049
+ G+ +AKV +G R + I S D + RR
Sbjct: 1222 RQCEGVTQAKVKTFGTRFIHLIRKHTPNGKREISIPLVSPHFGASDELDDFEFASRRTSS 1281
Query: 1050 NEA--PNANKGDDDDFTKSTARSKKRASKSQNKT 1081
+ A P + G +K++ R+ K S KT
Sbjct: 1282 STATKPRSGGGKASKSSKASERASKTTSGKSTKT 1315
>gi|226693393|ref|NP_031576.4| Bloom syndrome protein homolog isoform 1 [Mus musculus]
Length = 1419
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/686 (38%), Positives = 381/686 (55%), Gaps = 80/686 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ + S +FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 653 EHFQSLNFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 712
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 713 PACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIK 772
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 773 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 832
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 833 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 892
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 893 IRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQ 952
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S CVL+Y+Y D R+
Sbjct: 953 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRL 1012
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ + ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1013 KRLI---MMEKD------------GNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFG 1057
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKL-----------TGQQF 814
EK F+ CKK +CDNC K K + KDVTD K ++ V+ +F
Sbjct: 1058 EKGFNPDFCKKYPDVSCDNCCKTKDYKTKDVTDDVKNIIRFVQEHSSSPGTRNIGPAGRF 1117
Query: 815 SSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD 874
+ + ++++F GS + VK + G G ++ A R+ + L+++ L E++ +
Sbjct: 1118 TLNMLVDIFLGSKSAKVKS------GIFGKGTTYSRHNAERLFKKLILDKILDEDLYINA 1171
Query: 875 VYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR 934
++ V+ +KAH+++ G V F NS+ + K AK S
Sbjct: 1172 NDQPIAYVML--GTKAHSVLSGHLKV--DFMETENSSSIKKQKALVAKVSQ--------- 1218
Query: 935 NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTE 994
+ EV +L ++L + GV ++IF ATL+ L++ +
Sbjct: 1219 -------REEVVKKCLGELTEVCKLLGKVF------GVHYFNIFNTATLKKLAESLSSDP 1265
Query: 995 EELLEINGIGKAKVSKYGVRLLETIE 1020
E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1266 EVLLQIDGVTEDKLEKYGAEVIPVLQ 1291
>gi|148675035|gb|EDL06982.1| Bloom syndrome homolog (human), isoform CRA_a [Mus musculus]
Length = 1420
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 265/686 (38%), Positives = 381/686 (55%), Gaps = 80/686 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ + S +FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 654 EHFQSLNFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 713
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 714 PACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIK 773
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 774 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 833
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 834 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 893
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 894 IRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQ 953
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S CVL+Y+Y D R+
Sbjct: 954 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRL 1013
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ + ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1014 KRLI---MMEKD------------GNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFG 1058
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKL-----------TGQQF 814
EK F+ CKK +CDNC K K + KDVTD K ++ V+ +F
Sbjct: 1059 EKGFNPDFCKKYPDVSCDNCCKTKDYKTKDVTDDVKNIIRFVQEHSSSPGTRNIGPAGRF 1118
Query: 815 SSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD 874
+ + ++++F GS + VK + G G ++ A R+ + L+++ L E++ +
Sbjct: 1119 TLNMLVDIFLGSKSAKVKS------GIFGKGTTYSRHNAERLFKKLILDKILDEDLYINA 1172
Query: 875 VYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR 934
++ V+ +KAH+++ G V F NS+ + K AK S
Sbjct: 1173 NDQPIAYVML--GTKAHSVLSGHLKV--DFMETENSSSIKKQKALVAKVSQ--------- 1219
Query: 935 NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTE 994
+ EV +L ++L + GV ++IF ATL+ L++ +
Sbjct: 1220 -------REEVVKKCLGELTEVCKLLGKVF------GVHYFNIFNTATLKKLAESLSSDP 1266
Query: 995 EELLEINGIGKAKVSKYGVRLLETIE 1020
E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1267 EVLLQIDGVTEDKLEKYGAEVIPVLQ 1292
>gi|392344358|ref|XP_003748936.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 262/686 (38%), Positives = 383/686 (55%), Gaps = 80/686 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ + S +FP TK++ +K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 633 EHFQSLNFPHTKEMMKIFRKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 692
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 693 PACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIK 752
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+Q+F
Sbjct: 753 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQRF 812
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 813 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVALDCLEW 872
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 873 IRKHHPYDSGIIYCLSRKECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQ 932
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFV+H SLPKS+EGY+QE GRAGRDG+ S CVL+Y+Y D R+
Sbjct: 933 VICATIAFGMGIDKPDVRFVVHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRL 992
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + + + H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 993 KRLIM--MEKDGNY---HTR----------ETHVNNLYSMVHYCENITECRRIQLLAYFG 1037
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKL-----------TGQQF 814
EK F+ CKK +CDNC K K + KDVTD K +V V+ +F
Sbjct: 1038 EKGFNPDFCKKHPDVSCDNCCKTKDYKTKDVTDDVKNIVRFVQEHSSSPGTRNIGPAGRF 1097
Query: 815 SSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD 874
+ + ++++F GS + V+ + G G ++ A R+ + L+++ L E++ +
Sbjct: 1098 TLNMLVDIFLGSKSAKVQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLYINA 1151
Query: 875 VYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR 934
++ V+ +KAH+++ G V F NS+ + K A S
Sbjct: 1152 NDQPIAYVML--GTKAHSVLSGHLKV--DFMETENSSSVKKQKAAVAHVSQ--------- 1198
Query: 935 NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTE 994
++E + +L ++L + GV ++IF ATL+ L++ +
Sbjct: 1199 -------RDEAVMKCLGELADVCKLLGKVF------GVHYFNIFNTATLKKLAESLSSDP 1245
Query: 995 EELLEINGIGKAKVSKYGVRLLETIE 1020
E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1246 EVLLQIDGVTEDKLEKYGAEIIPVLQ 1271
>gi|392337763|ref|XP_003753349.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 262/686 (38%), Positives = 383/686 (55%), Gaps = 80/686 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ + S +FP TK++ +K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 633 EHFQSLNFPHTKEMMKIFRKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 692
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 693 PACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIK 752
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+Q+F
Sbjct: 753 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQRF 812
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 813 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVALDCLEW 872
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 873 IRKHHPYDSGIIYCLSRKECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQ 932
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFV+H SLPKS+EGY+QE GRAGRDG+ S CVL+Y+Y D R+
Sbjct: 933 VICATIAFGMGIDKPDVRFVVHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRL 992
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + + + H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 993 KRLIM--MEKDGNY---HTR----------ETHVNNLYSMVHYCENITECRRIQLLAYFG 1037
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKL-----------TGQQF 814
EK F+ CKK +CDNC K K + KDVTD K +V V+ +F
Sbjct: 1038 EKGFNPDFCKKHPDVSCDNCCKTKDYKTKDVTDDVKNIVRFVQEHSSSPGTRNIGPAGRF 1097
Query: 815 SSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD 874
+ + ++++F GS + V+ + G G ++ A R+ + L+++ L E++ +
Sbjct: 1098 TLNMLVDIFLGSKSAKVQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLYINA 1151
Query: 875 VYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR 934
++ V+ +KAH+++ G V F NS+ + K A S
Sbjct: 1152 NDQPIAYVML--GTKAHSVLSGHLKV--DFMETENSSSVKKQKAAVAHVSQ--------- 1198
Query: 935 NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTE 994
++E + +L ++L + GV ++IF ATL+ L++ +
Sbjct: 1199 -------RDEAVMKCLGELADVCKLLGKVF------GVHYFNIFNTATLKKLAESLSSDP 1245
Query: 995 EELLEINGIGKAKVSKYGVRLLETIE 1020
E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1246 EVLLQIDGVTEDKLEKYGAEIIPVLQ 1271
>gi|378733670|gb|EHY60129.1| bloom syndrome protein [Exophiala dermatitidis NIH/UT8656]
Length = 1681
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 274/739 (37%), Positives = 393/739 (53%), Gaps = 121/739 (16%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+K + KK F FR NQ E INAT+SG D FVLMPTGGGKSL YQLPA++
Sbjct: 813 PWSKDVALVLKKKFHLRGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVQSGH 872
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSD--YCKYKLL 489
G+T+VISPL+SL+QDQ+ HL NI A ++G ++ IL L D + +LL
Sbjct: 873 TRGVTIVISPLLSLMQDQVEHLKALNIQAQLINGETTVAHRKTILDHLRGDSPHDFVQLL 932
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V ++ +R E L++R LLARIVIDEAHCVSQWGHDFRPDY+ LG + +F
Sbjct: 933 YVTPEMVNQNQTFVRAFEGLHSRCLLARIVIDEAHCVSQWGHDFRPDYKALGEFRSRFNA 992
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKVAERL 599
PV+ALTATAT +VK DV+Q LG+ NC +F QSFNRPNL + + +A+ +
Sbjct: 993 VPVMALTATATENVKFDVMQVLGMENCEVFTQSFNRPNLTYEVRPKGKGRAVLDSIADLI 1052
Query: 600 ------QVGLSYG---------HFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQW 644
Q G+ Y L KE+++ +A YH I +R +Q++W
Sbjct: 1053 KSTYDGQAGIVYCLSRKNCESVATQLRKEYHI-------EAQHYHAGIPSGKRIEIQQKW 1105
Query: 645 SKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSY 704
+ E N+I AT+AFGMGI+KPDVRFVIHH++PKS+EGY+QE GRAGRDG +S C LYY Y
Sbjct: 1106 QEGEFNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGNQSGCYLYYGY 1165
Query: 705 SDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRL 763
D +KHMI G + SP H + LLR +V +CEN DCRRL
Sbjct: 1166 GDTASLKHMIENG--DGSPQQKEHQK---------------QLLRNVVQFCENRSDCRRL 1208
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEV 822
L +F E+FD C+ CDNC+ +F D ++ AK ++LV +L + + H +V
Sbjct: 1209 QVLDYFNERFDPRDCRNGCDNCASTSTFETHDFSEHAKNAMKLVQRLQRSEVTVLHCADV 1268
Query: 823 FRGS-LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSS 881
+RG+ N+ + + H + +G G LA+ + R+ L+ ED L+ + K + G +
Sbjct: 1269 YRGAKPNKKMLEGGHNMIPEYGLGAELARGDVERLFYRLIAEDALL-QYNKQNTSGFATQ 1327
Query: 882 VLKVNQSKAHNLIIGRQNV---VLRFP---------------SAINSTKLSKSDVTPAKG 923
+++ K + + GR+ + VL P A STK + +D PA
Sbjct: 1328 YVQLG-PKCRDFLHGRRPLKIQVLVSPRGKPKSNGPATKGRSKAQRSTKKALADDYPAST 1386
Query: 924 SLLSGKLSP-------SRNDTPSQPQNEVDLNLS--AKLYSSLRMLRTLLV--------- 965
+ +S + P R+ + + EVD S + Y+ R+ + +
Sbjct: 1387 N-VSSPIQPRARRKIVRRDQLSDESEEEVDSTSSEEEEAYAPRRVNKKPALGPPITADQD 1445
Query: 966 --------------------KEAGEGVMAYHI----FGNATLQHLSKRVPRTEEELLEIN 1001
KE V+A ++ + L+ ++ + P+T+EELLEI
Sbjct: 1446 IGSLNPIHQHILEDFIEKAKKEVDRQVIAKNLRQKPVTDRVLRQIAVQFPQTDEELLEIT 1505
Query: 1002 GIGKAKVSKYGVRLLETIE 1020
G+ +G LL+ I+
Sbjct: 1506 GLNPEMFRLFGPPLLQLIK 1524
>gi|348580071|ref|XP_003475802.1| PREDICTED: Bloom syndrome protein-like [Cavia porcellus]
Length = 1405
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 269/728 (36%), Positives = 396/728 (54%), Gaps = 92/728 (12%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
++ +++ S FP TK++ K FG H+FR NQ E INAT+ G D F+LMPTGGGKSL
Sbjct: 626 TSQERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINATLLGEDCFILMPTGGGKSLC 685
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+
Sbjct: 686 YQLPACVLPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEAASIYLQLSKKDP 745
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
KLLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFRPDY+ + +L+
Sbjct: 746 IIKLLYVTPEKVCASNRLISILENLYERKLLARFVIDEAHCVSQWGHDFRPDYKRMNMLR 805
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERL 599
QKFP+ PV+ALTATA + V+ D++ L ++ +F SFNR NL +KVA
Sbjct: 806 QKFPSVPVMALTATANSRVQTDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDC 865
Query: 600 QVGLSYGHFFLLKEFYVVS-LEC----------GHKAAFYHGSIDPAQRAFVQKQW-SKD 647
+ H + Y +S EC G A YH + A R VQ +W ++D
Sbjct: 866 LEWIRKHHPYDSGIIYCLSRWECDTMADTLQKDGLAALAYHAGLSDAARDEVQHKWINQD 925
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D
Sbjct: 926 GCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDV 985
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
R+K +I + E+ NR ET+ NL MV YCEN +CRR+ L
Sbjct: 986 TRLKRLI---MMEKD-----GNR-------HTKETHFNNLYSMVHYCENITECRRIQLLA 1030
Query: 768 HFGEK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVK----LTGQ------ 812
+FGE F+ C+K +CDNC K K + +DVT K +++ ++ L G
Sbjct: 1031 YFGENGFNPEFCRKHPDVSCDNCCKTKDYKTRDVTGDVKNIIKFIQEHSSLQGARSAKYV 1090
Query: 813 -----QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLM 867
+F+ + ++++F GS + V+ + G G ++ A R+ + L+++ L
Sbjct: 1091 GPSSGRFTMNMLVDIFLGSKSAKVQS------GIFGKGSTYSRHNAERLFKKLILDKILD 1144
Query: 868 EEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLS 927
E D+Y + N L++G + P+ +N L
Sbjct: 1145 E-----DLY------INANDQPVAYLMLG-----TKAPAVLNGQ--------------LK 1174
Query: 928 GKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL--LVKEAGE--GVMAYHIFGNATL 983
+ N + + Q ++ +S + + L L + K G+ GV ++IF ATL
Sbjct: 1175 VDFMETENSSSIKKQKALEAKVSQREEVVKKCLGELTEVCKSLGKVFGVHYFNIFNTATL 1234
Query: 984 QHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSG 1043
+ L++ + E LL+I+G+ + K+ KYG ++ ++ + + + S +SG
Sbjct: 1235 KKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVIPVLQKYSQWTLPAEDTSPGISLSGNSG 1294
Query: 1044 KRRRDENE 1051
RR+ E
Sbjct: 1295 SRRKAPEE 1302
>gi|367004206|ref|XP_003686836.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
gi|357525138|emb|CCE64402.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
Length = 1355
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/570 (40%), Positives = 343/570 (60%), Gaps = 45/570 (7%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----C 432
WT ++++ ++VF FRPNQ + +NAT+SG DVFVLMPTGGGKSL YQLPA+I
Sbjct: 584 WTNEVKSKLQEVFKLPGFRPNQEDAVNATLSGKDVFVLMPTGGGKSLCYQLPAIIKSGNT 643
Query: 433 PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
G T+V+SPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y++
Sbjct: 644 KGTTIVVSPLISLMQDQVDHLLAKNIKASMFSSKGTADQRRQTFNLF--IHGLLDLIYIS 701
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE ++ S+ R + L+ LARIV+DEAHCVS WGHDFRPDY+ L K ++PN P+
Sbjct: 702 PEMISASEQCKRAIAKLHEDGNLARIVVDEAHCVSNWGHDFRPDYKELKFFKGEYPNIPM 761
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE--------------R 598
+ALTATA+ V+ D++ L L + + +QSFNR NL+ + K ++ R
Sbjct: 762 MALTATASEQVRMDIIHNLKLKDPVFLKQSFNRTNLYYEIIKKSKNTIFEMSDDIKRRFR 821
Query: 599 LQVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
Q G+ Y H E +E G K A+YH ++P R VQK W DE+ +ICATVA
Sbjct: 822 NQTGIIYCHSKNSCEQTSAQMERAGIKCAYYHAGMEPDDRLKVQKAWQADEVQVICATVA 881
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG+ S C+ YYS+ D ++ MI +
Sbjct: 882 FGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCITYYSFKDVRTIQTMIQKD 941
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
N+ + E + L ++++YC+N DCRR L L +F E+FDS
Sbjct: 942 E-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEQFDSKL 986
Query: 778 CKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKH 834
CKK CDNC K+ + E+DVT+ AK + ++VK + + + + ++F+GS + V +
Sbjct: 987 CKKNCDNCRNSKNIVTEERDVTNDAKVIAKMVKEIEYNRVTLIYCQDIFKGSKSSKVVRA 1046
Query: 835 RHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLI 894
H++L+ HGAGK L++S+ RI HL+ L +E + G S+ +K+ KA+ L+
Sbjct: 1047 GHDSLNGHGAGKSLSRSDIERIFFHLITIGVL-QEYSIMNNSGFASNYVKLG-PKAYGLL 1104
Query: 895 IGRQNVVLRFPSAINSTKLSKSDVTPAKGS 924
G V ++F +++S+K S TPA S
Sbjct: 1105 TGNMKVKMQFNISVDSSKSS----TPAPNS 1130
>gi|4557365|ref|NP_000048.1| Bloom syndrome protein [Homo sapiens]
gi|1705486|sp|P54132.1|BLM_HUMAN RecName: Full=Bloom syndrome protein; AltName: Full=DNA helicase,
RecQ-like type 2; Short=RecQ2; AltName: Full=RecQ
protein-like 3
gi|1072122|gb|AAA87850.1| Bloom's syndrome protein [Homo sapiens]
gi|58003498|gb|AAW62255.1| Bloom syndrome [Homo sapiens]
gi|62739395|gb|AAH93622.1| Bloom syndrome [Homo sapiens]
gi|75517719|gb|AAI01568.1| Bloom syndrome [Homo sapiens]
gi|92096020|gb|AAI15033.1| Bloom syndrome [Homo sapiens]
gi|92097932|gb|AAI15031.1| Bloom syndrome [Homo sapiens]
gi|119622513|gb|EAX02108.1| Bloom syndrome, isoform CRA_b [Homo sapiens]
Length = 1417
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 266/691 (38%), Positives = 384/691 (55%), Gaps = 87/691 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 642 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 701
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 702 PACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIK 761
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+ S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 762 LLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 821
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 822 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 881
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D
Sbjct: 882 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQ 941
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 942 VICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 1001
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1002 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1046
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K +V V K G
Sbjct: 1047 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGMRNIKHVGPS 1106
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1107 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1160
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA ++ G N+ + F NS+ + K AK S
Sbjct: 1161 INANDQAIAYVMLGN--KAQTVLNG--NLKVDFMETENSSSVKKQKALVAKVS------- 1209
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1210 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1252
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1253 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1283
>gi|397472473|ref|XP_003807768.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan paniscus]
gi|397472475|ref|XP_003807769.1| PREDICTED: Bloom syndrome protein isoform 2 [Pan paniscus]
Length = 1417
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 266/691 (38%), Positives = 384/691 (55%), Gaps = 87/691 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 642 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 701
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 702 PACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIK 761
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+ S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 762 LLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 821
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 822 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 881
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D
Sbjct: 882 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQ 941
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 942 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 1001
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1002 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1046
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K +V V K G
Sbjct: 1047 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGMRNIKHVGPS 1106
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1107 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1160
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA ++ G N+ + F NS+ + K AK S
Sbjct: 1161 INANDQAIAYVMLGN--KAQTVLNG--NLKVDFMETENSSSVKKQKALVAKVS------- 1209
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1210 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1252
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1253 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1283
>gi|410346341|gb|JAA40688.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 266/691 (38%), Positives = 384/691 (55%), Gaps = 87/691 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 642 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 701
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 702 PACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIK 761
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+ S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 762 LLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 821
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 822 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 881
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D
Sbjct: 882 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQ 941
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 942 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 1001
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1002 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1046
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K +V V K G
Sbjct: 1047 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGMRNIKHVGPS 1106
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1107 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1160
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA ++ G N+ + F NS+ + K AK S
Sbjct: 1161 INANDQAIAYVMLGN--KAQTVLNG--NLKVDFMETENSSSVKKQKALVAKVS------- 1209
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1210 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1252
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1253 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1283
>gi|410261436|gb|JAA18684.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 266/691 (38%), Positives = 384/691 (55%), Gaps = 87/691 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 642 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 701
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 702 PACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIK 761
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+ S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 762 LLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 821
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 822 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 881
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D
Sbjct: 882 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQ 941
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 942 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 1001
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1002 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1046
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K +V V K G
Sbjct: 1047 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGMRNIKHVGPS 1106
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1107 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1160
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA ++ G N+ + F NS+ + K AK S
Sbjct: 1161 INANDQAIAYVMLGN--KAQTVLNG--NLKVDFMETENSSSVKKQKALVAKVS------- 1209
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1210 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1252
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1253 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1283
>gi|114658901|ref|XP_510594.2| PREDICTED: Bloom syndrome protein isoform 2 [Pan troglodytes]
gi|332844655|ref|XP_003314898.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan troglodytes]
Length = 1417
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 266/691 (38%), Positives = 384/691 (55%), Gaps = 87/691 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 642 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 701
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 702 PACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIK 761
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+ S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 762 LLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 821
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 822 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 881
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D
Sbjct: 882 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQ 941
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 942 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 1001
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1002 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1046
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K +V V K G
Sbjct: 1047 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGMRNIKHVGPS 1106
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1107 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1160
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA ++ G N+ + F NS+ + K AK S
Sbjct: 1161 INANDQAIAYVMLGN--KAQTVLNG--NLKVDFMETENSSSVKKQKALVAKVS------- 1209
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1210 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1252
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1253 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1283
>gi|344284334|ref|XP_003413923.1| PREDICTED: Bloom syndrome protein [Loxodonta africana]
Length = 1429
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 277/742 (37%), Positives = 391/742 (52%), Gaps = 87/742 (11%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
+ S DFP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQLPA
Sbjct: 656 FQSLDFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPA 715
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
I PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ KLL
Sbjct: 716 CIAPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLL 775
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEKV S+ L+ LE+L R LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKFP
Sbjct: 776 YVTPEKVCASNRLISTLENLYQRTLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPL 835
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVGLS 604
PV+ALTATA V++D++ L ++ +F SFNR NL +KVA +
Sbjct: 836 VPVMALTATANPRVQKDILTQLKILKPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIR 895
Query: 605 YGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEINII 652
H + Y +S EC G A YH + R VQ +W ++D +I
Sbjct: 896 KHHPYDSGIIYCLSRRECDTMAETLKKNGLAALAYHAGLSDCARDEVQHKWINQDGCQVI 955
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
CATVAFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+K
Sbjct: 956 CATVAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKR 1015
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I + E+ + ET+ NL MV YCEN +CRR+ L +FGE
Sbjct: 1016 LI---LTEKD------------GNQHTKETHFNNLYSMVHYCENITECRRIQLLAYFGEN 1060
Query: 773 -FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ--Q 813
F+ CKK +CDNC K K F +DVTD K +V V K G +
Sbjct: 1061 GFNPYFCKKYPEVSCDNCCKTKDFKTRDVTDDVKNIVRFVQEYNSSQGMKNIKHAGPSGR 1120
Query: 814 FSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKS 873
F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++ +
Sbjct: 1121 FTMNMLVDIFLGSKSAKIQS------GIFGMGSAYSRHNAERLFKKLILDKILDEDLYIN 1174
Query: 874 DVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPS 933
+++ V+ ++A ++ G V F NS+ + K AK S
Sbjct: 1175 ANDQAIAYVMP--GTEAQTVLNGHLKV--DFMETENSSSVKKQKALEAKVS--------- 1221
Query: 934 RNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKRVP 991
Q E + K L T + K G+ GV ++IF ATL+ L++ +
Sbjct: 1222 --------QRE---EMVKKCLGEL----TEICKSLGKVFGVHYFNIFNTATLKKLAESLS 1266
Query: 992 RTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENE 1051
E LL+I+G+ + K+ KYG ++ ++ + + N + S+ G R E
Sbjct: 1267 SDPEVLLQIDGVTEDKLEKYGAEVIPILQKYSEWTLPAEDNSPQRSLSSSRGPGRNTPEE 1326
Query: 1052 APNANKGDDDDFTKSTARSKKR 1073
F T +KR
Sbjct: 1327 LGEETPISSHYFASKTKNERKR 1348
>gi|189054874|dbj|BAG36927.1| unnamed protein product [Homo sapiens]
Length = 1417
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 265/691 (38%), Positives = 383/691 (55%), Gaps = 87/691 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 642 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 701
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 702 PACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIK 761
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+ S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 762 LLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 821
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 822 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 881
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++
Sbjct: 882 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQGGCQ 941
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 942 VICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 1001
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1002 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1046
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K +V V K G
Sbjct: 1047 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGMRNIKHVGPS 1106
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1107 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1160
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA ++ G N+ + F NS+ + K AK S
Sbjct: 1161 INANDQAIAYVMLGN--KAQTVLNG--NLKVDFMETENSSSVKKQKALVAKVS------- 1209
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1210 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1252
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1253 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1283
>gi|407917347|gb|EKG10661.1| Helicase [Macrophomina phaseolina MS6]
Length = 1739
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/522 (42%), Positives = 316/522 (60%), Gaps = 45/522 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
FPWT +++ K F FRP+Q E INAT++G D FVLMPTGGGKSL YQLPA++
Sbjct: 848 FPWTGEVKKTLKDQFHLRGFRPHQLETINATLAGKDCFVLMPTGGGKSLCYQLPAVVQSG 907
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK--YKL 488
G+T+VISPL+SL++DQ+ HL +I A +++G + + +++ I+ L + ++
Sbjct: 908 KTRGVTVVISPLLSLMEDQVNHLRALHIQAFYINGELSYEQRRFIMNALREPQVEKFIQV 967
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE ++K+ ++ L+ L+ R+ LARIVIDEAHCVSQWGHDFRPDY+ LG +++F
Sbjct: 968 LYVTPEMLSKNQAMVNLLQDLHHRQRLARIVIDEAHCVSQWGHDFRPDYKALGETRRQFI 1027
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKVAE- 597
PV+ALTATAT +VK D + LG+ C IF QSFNRPNL+ + +K+A+
Sbjct: 1028 GVPVMALTATATQNVKVDTIHNLGIQGCEIFAQSFNRPNLYYEVRTKGKREDTLQKIADI 1087
Query: 598 -----RLQVGLSYGHFFLLKEFYVVSLECGHK----AAFYHGSIDPAQRAFVQKQWSKDE 648
R Q G+ Y K+ V++ + K A YH ++ A+++ QK W
Sbjct: 1088 IKTQYRGQSGIVY--CLSRKKCEVIAQQLREKHNISAHHYHAGMESAEKSETQKSWQAGG 1145
Query: 649 INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFI 708
+I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C L+Y Y D
Sbjct: 1146 YKVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLFYGYQDTT 1205
Query: 709 RVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVH 768
+K MI +G S + E L +V +CEN DCRR+ L +
Sbjct: 1206 ILKKMIKEG----------------EGSRQQKERQYAMLRNVVQFCENKADCRRVQVLAY 1249
Query: 769 FGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSL 827
F E F + C CDNC+ +F +D TD A + V LV K+ + + H +VFRG+
Sbjct: 1250 FNESFRAEDCDAECDNCNSTTTFEYRDFTDLAAEAVTLVQKIQTENVTLLHCSDVFRGAS 1309
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
++ +K H+ L +GAG L + +A R+ + L+ E L E+
Sbjct: 1310 SKRIKDLGHDCLEEYGAGSGLERGDAERLFQRLISEGALQEK 1351
>gi|219518767|gb|AAI43281.1| BLM protein [Homo sapiens]
Length = 1042
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/691 (37%), Positives = 383/691 (55%), Gaps = 87/691 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 267 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 326
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 327 PACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIK 386
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+ S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 387 LLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 446
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----EKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 447 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 506
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D
Sbjct: 507 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQ 566
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 567 VICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 626
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 627 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 671
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K +V V K G
Sbjct: 672 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGMRNIKHVGPS 731
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 732 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 785
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N+++ + N+ + F NS+ + K AK S
Sbjct: 786 INANDQAIAYVMLGNKAQT----VLNDNLKVDFMETENSSSVKKQKALVAKVS------- 834
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
R + + E+ T + K G+ GV ++IF TL+ L++
Sbjct: 835 -QREEMVKKCLGEL----------------TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 877
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 878 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 908
>gi|395861752|ref|XP_003803142.1| PREDICTED: Bloom syndrome protein [Otolemur garnettii]
Length = 1389
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 265/685 (38%), Positives = 379/685 (55%), Gaps = 75/685 (10%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ + S +FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 632 EHFQSLNFPHTKEMLKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 691
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 692 PACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIK 751
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 752 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 811
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 812 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 871
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + ++R VQ +W ++D
Sbjct: 872 IRKYHPYDSGIIYCLSRRECDTMAGTLRKDGLAALAYHAGLSDSERDEVQHKWINQDGCQ 931
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICATVAFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 932 VICATVAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEMSHCLLFYTYHDVTRL 991
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ + ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 992 KRLI---MMEKD------------GNHHTKETHFNNLYSMVHYCENITECRRIQLLAYFG 1036
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVK---LTGQQFSSSHILEV 822
E F+ CKK +CDNC K K + +DVTD K ++ V+ L+ + + HI
Sbjct: 1037 ENGFNPDFCKKYPDVSCDNCCKRKDYKIRDVTDDVKSIIRFVQEHSLSQRARNIKHIGSA 1096
Query: 823 FRGSLNQYV-----KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYG 877
R ++N V K L + G G ++ A R+ + L+++ L E++ +
Sbjct: 1097 GRFTMNMLVDIFLGSKSAKIQLGIFGKGSAYSRHNAERLFKKLILDKILDEDLYINANDQ 1156
Query: 878 SVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDT 937
+++ ++ + KA ++ G V F NS+ + K AK S
Sbjct: 1157 AIAYIMPGD--KAQTVLSGHLKV--DFMETENSSSVKKQKALVAKVS------------- 1199
Query: 938 PSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKRVPRTEE 995
Q E + K L T + K G+ GV ++IF TL+ L++ + E
Sbjct: 1200 ----QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNIVTLKKLAESLSSDPE 1248
Query: 996 ELLEINGIGKAKVSKYGVRLLETIE 1020
LL+I+G+ + K+ KYG ++ ++
Sbjct: 1249 VLLQIDGVTEDKLEKYGAEVIAVLQ 1273
>gi|146322807|ref|XP_749627.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
gi|129556812|gb|EAL87589.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
Length = 1563
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/522 (43%), Positives = 313/522 (59%), Gaps = 46/522 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG- 434
PWTK ++ + F FR NQ E I+AT+SG D FVLMPTGGGKSL YQLP+++ G
Sbjct: 715 PWTKDVKNVLRDRFHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVTSGS 774
Query: 435 ---ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYKLL 489
+T+V+SPL+SL+QDQ+ HL + I A L+G + E+Q I++ L+ + +LL
Sbjct: 775 TRGVTIVVSPLLSLMQDQVSHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELL 834
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
Y+TPE V KS L+R LE LN R LARIVIDEAHCVSQWGHDFRPDY+ LG ++ + P
Sbjct: 835 YITPEMVNKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPG 894
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE---KVAERLQ-----V 601
P++ALTATAT +VK DV+ L + C IF QSFNRPNL + K AE L+ +
Sbjct: 895 VPMMALTATATENVKVDVIHNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAEVLENIADII 954
Query: 602 GLSY----GHFFLLK----EFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINI 651
SY G + L E +L H +A +YH +D ++RA VQ+ W +++
Sbjct: 955 KTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVHV 1014
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LYYSY D +
Sbjct: 1015 IVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSIM 1074
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVHFG 770
MI +G G+ + +LR ++ YC N DCRR+ L +F
Sbjct: 1075 SMIDKG-----------------EGGKQQKNRQRQMLRNVMQYCLNLADCRRVQILAYFN 1117
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL---TGQQFSSSHILEVFRGSL 827
E F C K+CDNC F +D + A ++++V+ + + S+ + +FRGS+
Sbjct: 1118 EYFRPIDCNKSCDNCRSDGIFEHRDFSQQAASVLKIVRYFQDLEDKVTMSYCVNIFRGSV 1177
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
++ + H+ GAG L A R+ ++L++E L EE
Sbjct: 1178 KRF-RSPEHKDAPGFGAGSGLDLQVAERLFQYLLVEGALFEE 1218
>gi|159129033|gb|EDP54147.1| RecQ family helicase MusN [Aspergillus fumigatus A1163]
Length = 1563
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/522 (43%), Positives = 313/522 (59%), Gaps = 46/522 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG- 434
PWTK ++ + F FR NQ E I+AT+SG D FVLMPTGGGKSL YQLP+++ G
Sbjct: 715 PWTKDVKNVLRDRFHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVTSGS 774
Query: 435 ---ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYKLL 489
+T+V+SPL+SL+QDQ+ HL + I A L+G + E+Q I++ L+ + +LL
Sbjct: 775 TRGVTIVVSPLLSLMQDQVSHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELL 834
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
Y+TPE V KS L+R LE LN R LARIVIDEAHCVSQWGHDFRPDY+ LG ++ + P
Sbjct: 835 YITPEMVNKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPG 894
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE---KVAERLQ-----V 601
P++ALTATAT +VK DV+ L + C IF QSFNRPNL + K AE L+ +
Sbjct: 895 VPMMALTATATENVKVDVIHNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAEVLENIADII 954
Query: 602 GLSY----GHFFLLK----EFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINI 651
SY G + L E +L H +A +YH +D ++RA VQ+ W +++
Sbjct: 955 KTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVHV 1014
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LYYSY D +
Sbjct: 1015 IVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSIM 1074
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVHFG 770
MI +G G+ + +LR ++ YC N DCRR+ L +F
Sbjct: 1075 SMIDKG-----------------EGGKQQKNRQRQMLRNVMQYCLNLADCRRVQILAYFN 1117
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL---TGQQFSSSHILEVFRGSL 827
E F C K+CDNC F +D + A ++++V+ + + S+ + +FRGS+
Sbjct: 1118 EYFRPIDCNKSCDNCRSDGIFEHRDFSQQAASVLKIVRYFQDLEDKVTMSYCVNIFRGSV 1177
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
++ + H+ GAG L A R+ ++L++E L EE
Sbjct: 1178 KRF-RSPEHKDAPGFGAGSGLDLQVAERLFQYLLVEGALFEE 1218
>gi|151945893|gb|EDN64125.1| Nucleolar DNA helicase of the RecQ family involved in maintenance of
genome integrity [Saccharomyces cerevisiae YJM789]
Length = 1447
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + H +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIHCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|119480183|ref|XP_001260120.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
gi|119408274|gb|EAW18223.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
Length = 1564
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/522 (43%), Positives = 313/522 (59%), Gaps = 46/522 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG- 434
PWTK ++ + F FR NQ E I+AT+SG D FVLMPTGGGKSL YQLP+++ G
Sbjct: 717 PWTKDVKNVLRDRFHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVTSGS 776
Query: 435 ---ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYKLL 489
+T+V+SPL+SL+QDQ+ HL + I A L+G + E+Q I++ L+ + +LL
Sbjct: 777 TRGVTIVVSPLLSLMQDQVSHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELL 836
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
Y+TPE V KS L+R LE LN R LARIVIDEAHCVSQWGHDFRPDY+ LG ++ + P
Sbjct: 837 YITPEMVNKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPG 896
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE---KVAERLQ-----V 601
P++ALTATAT +VK DV+ L + C IF QSFNRPNL + K AE L+ +
Sbjct: 897 VPMMALTATATENVKVDVIHNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAEVLENIADII 956
Query: 602 GLSY----GHFFLLK----EFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINI 651
SY G + L E +L H +A +YH +D ++RA VQ+ W +++
Sbjct: 957 KTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVHV 1016
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LYYSY D +
Sbjct: 1017 IVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSIM 1076
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVHFG 770
MI +G G+ + +LR ++ YC N DCRR+ L +F
Sbjct: 1077 SMIDKG-----------------EGGKQQKNRQRQMLRNVMQYCLNLADCRRVQILAYFN 1119
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL---TGQQFSSSHILEVFRGSL 827
E F C K+CDNC F +D + A ++++V+ + + S+ + +FRG++
Sbjct: 1120 EYFRQNDCNKSCDNCKSNGIFEHRDFSQQAASVLKIVRYFQDLEDKVTMSYCVNIFRGTV 1179
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
++ + H+ GAG L A R+ ++L++E L EE
Sbjct: 1180 KRF-RSPEHKDAPGFGAGSGLDLQVAERLFQYLLVEGALFEE 1220
>gi|261195180|ref|XP_002623994.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
gi|239587866|gb|EEQ70509.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
Length = 1562
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 271/738 (36%), Positives = 384/738 (52%), Gaps = 115/738 (15%)
Query: 372 SWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI 431
S PW+K ++ + F FRPNQ E INAT+SG DVFVLMPTGGGKSL YQLP++I
Sbjct: 672 SLQHPWSKDVKHALRHRFNLPGFRPNQLEAINATLSGKDVFVLMPTGGGKSLCYQLPSVI 731
Query: 432 ----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEI---LRELNSDYC 484
G+T+VISPL+SL++DQ+ HL I A+ L+G+ E+ EI LR N +
Sbjct: 732 QSGKTKGVTVVISPLLSLMEDQVAHLRDLKIQASVLNGDASKEEKMEIYGALRNANVEKL 791
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+LLYVTPE V K+ LL L L++R LARIVIDEAHCVSQWGHDFRPDY+ LG +
Sbjct: 792 -IQLLYVTPEMVNKNGALLDILSHLHSRCKLARIVIDEAHCVSQWGHDFRPDYKELGNTR 850
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK---------- 594
KFP P++ALTATAT +VK DV+ LG+ + +F QSFNRPNL + +
Sbjct: 851 TKFPGIPLMALTATATENVKVDVIHNLGMHDAEVFVQSFNRPNLIYEVRRKPKGTNVVAS 910
Query: 595 VAERLQVGLS--YGHFFLLK----EFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSK 646
+AE ++ S G + L E L H KA YH + R +Q+ W +
Sbjct: 911 IAETIKGSYSGKAGIIYCLSRQSCERVAEQLRDTHKIKAVHYHAGLPSNDRISIQRDWQR 970
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+ N+I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LYY + D
Sbjct: 971 GKYNVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGERSGCYLYYGFQD 1030
Query: 707 FIRVKHMI--SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRL 763
++HMI +G +EQ ++ +LR +V +CEN DCRR+
Sbjct: 1031 TASIRHMIDKGEGSSEQ-------------------KSRQHRMLRHVVQFCENWTDCRRV 1071
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEV 822
L +F EKF +C ++CDNC F E+D TD A V+LV +L+ +Q + + +++
Sbjct: 1072 QVLTYFNEKFKKENCNRSCDNCKADLPFEERDFTDLAASAVKLVGRLSNRQVTYFYPVDI 1131
Query: 823 FRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV 882
RG+ +Y + G G L + + R+ HL+ E+ L EE +V+
Sbjct: 1132 LRGAKMKYSDPA-DKYFPEFGIGADLDRLDVQRMFTHLICEEALREE----NVFNKARFA 1186
Query: 883 LKVNQ--SKAHNLIIGRQNVVLR---FPSAINSTKL-SKSDVTPAKGSLLSGKLSPSRND 936
+ Q KA + R ++ P+ + KL +K+ + G +G P +
Sbjct: 1187 TQYIQLGEKAGEFLARRNKLMFPIRVLPNGKATEKLKTKTTRSHGTGVRAAGNEYPQSTN 1246
Query: 937 TPSQ--------------------------------------PQNEVDLNLSAKL----- 953
S P+ D NL +
Sbjct: 1247 VSSPIQESLRRRKLGRGYTACYASEEDEDESDGFEPVREAGVPRRSYDENLGPPITDDGK 1306
Query: 954 YSSLRMLRTLLV-------KEAGEGVMAY-----HIFGNATLQHLSKRVPRTEEELLEIN 1001
S L L++++V KEA +M F +A L+ ++ +P+ +LL+I
Sbjct: 1307 LSRLDSLQSIIVDEFMFYAKEACHEIMMKKNLRNQPFPDAILREMAISLPQDTNQLLKIP 1366
Query: 1002 GIGKAKVSKYGVRLLETI 1019
I KV +YG++ L I
Sbjct: 1367 NINPDKVDRYGIQFLRLI 1384
>gi|239610645|gb|EEQ87632.1| RecQ family helicase MusN [Ajellomyces dermatitidis ER-3]
gi|327348921|gb|EGE77778.1| RecQ family helicase MusN [Ajellomyces dermatitidis ATCC 18188]
Length = 1562
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 271/738 (36%), Positives = 384/738 (52%), Gaps = 115/738 (15%)
Query: 372 SWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI 431
S PW+K ++ + F FRPNQ E INAT+SG DVFVLMPTGGGKSL YQLP++I
Sbjct: 672 SLQHPWSKDVKHALRHRFNLPGFRPNQLEAINATLSGKDVFVLMPTGGGKSLCYQLPSVI 731
Query: 432 ----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEI---LRELNSDYC 484
G+T+VISPL+SL++DQ+ HL I A+ L+G+ E+ EI LR N +
Sbjct: 732 QSGKTKGVTVVISPLLSLMEDQVAHLRDLKIQASVLNGDASKEEKMEIYGALRNANVEKL 791
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+LLYVTPE V K+ LL L L++R LARIVIDEAHCVSQWGHDFRPDY+ LG +
Sbjct: 792 -IQLLYVTPEMVNKNGALLDILSHLHSRCKLARIVIDEAHCVSQWGHDFRPDYKELGNTR 850
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK---------- 594
KFP P++ALTATAT +VK DV+ LG+ + +F QSFNRPNL + +
Sbjct: 851 TKFPGIPLMALTATATENVKVDVIHNLGMHDAEVFVQSFNRPNLIYEVRRKPKGTNVVAS 910
Query: 595 VAERLQVGLS--YGHFFLLK----EFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSK 646
+AE ++ S G + L E L H KA YH + R +Q+ W +
Sbjct: 911 IAETIKGSYSGKAGIIYCLSRQSCERVAEQLRDTHKIKAVHYHAGLPSNDRISIQRDWQR 970
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+ N+I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LYY + D
Sbjct: 971 GKYNVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGERSGCYLYYGFQD 1030
Query: 707 FIRVKHMI--SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRL 763
++HMI +G +EQ ++ +LR +V +CEN DCRR+
Sbjct: 1031 TASIRHMIDKGEGSSEQ-------------------KSRQHRMLRHVVQFCENWTDCRRV 1071
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEV 822
L +F EKF +C ++CDNC F E+D TD A V+LV +L+ +Q + + +++
Sbjct: 1072 QVLTYFNEKFKKENCNRSCDNCKADLPFEERDFTDLAASAVKLVGRLSNRQVTYFYPVDI 1131
Query: 823 FRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV 882
RG+ +Y + G G L + + R+ HL+ E+ L EE +V+
Sbjct: 1132 LRGAKMKYSDPA-DKYFPEFGIGADLDRLDVQRMFTHLICEEALREE----NVFNKARFA 1186
Query: 883 LKVNQ--SKAHNLIIGRQNVVLR---FPSAINSTKL-SKSDVTPAKGSLLSGKLSPSRND 936
+ Q KA + R ++ P+ + KL +K+ + G +G P +
Sbjct: 1187 TQYIQLGEKAGEFLARRNKLMFPIRVLPNGKATEKLKTKTTRSHGTGVRAAGNEYPQSTN 1246
Query: 937 TPSQ--------------------------------------PQNEVDLNLSAKL----- 953
S P+ D NL +
Sbjct: 1247 VSSPIQESLRRRKLGRGYTACYASEEDEDESDGFEPVREAGVPRRSYDENLGPPITDDGK 1306
Query: 954 YSSLRMLRTLLV-------KEAGEGVMAY-----HIFGNATLQHLSKRVPRTEEELLEIN 1001
S L L++++V KEA +M F +A L+ ++ +P+ +LL+I
Sbjct: 1307 LSRLDSLQSIIVDEFMFYAKEACHEIMMKKNLRNQPFPDAILREMAISLPQDTNQLLKIP 1366
Query: 1002 GIGKAKVSKYGVRLLETI 1019
I KV +YG++ L I
Sbjct: 1367 NINPDKVDRYGIQFLRLI 1384
>gi|261289349|ref|XP_002603118.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
gi|229288434|gb|EEN59129.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
Length = 666
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 268/712 (37%), Positives = 372/712 (52%), Gaps = 117/712 (16%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
FP + ++ + KVFG H FR NQ E NA + G D F+LMPTGGGKSL YQLPA++ G
Sbjct: 6 FPHSSRMTSLFNKVFGLHRFRTNQLEACNAALLGKDCFILMPTGGGKSLCYQLPAIVSGG 65
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPE 494
+T+VISPL SLIQDQ+ L +PA LSG + + +L + KLLYVTPE
Sbjct: 66 VTIVISPLKSLIQDQVSKLNGLEVPAAHLSGELSQQVASGVYMDLARRTPQTKLLYVTPE 125
Query: 495 KVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLA 554
KV+ S+ LL L+SL R LL R VIDEAHCVSQWGHDFRPDY+ L +L++ FP P++A
Sbjct: 126 KVSSSEKLLSTLKSLYQRGLLDRFVIDEAHCVSQWGHDFRPDYKKLCVLRKSFPGVPMMA 185
Query: 555 LTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-------------EKVAERLQV 601
LTATAT V+ D++ LG+ + F QSFNR NL E + R +
Sbjct: 186 LTATATPRVRRDILHQLGMTDPRWFVQSFNRTNLHYSVMPKKVKSATKEVLELINSRFRS 245
Query: 602 GLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAF 658
+ KE VS E G A YH + +RA +Q W + +ICAT+AF
Sbjct: 246 KTGIVYCLSRKECETVSDELCRNGTSACAYHAGMSDKERARIQDLWP-EHYKVICATIAF 304
Query: 659 GMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGV 718
GMGI+KPDVRFVIH+SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D +R++ +I
Sbjct: 305 GMGIDKPDVRFVIHYSLPKSVEGYYQESGRAGRDGEASDCILFYNYHDKMRMQKLI---- 360
Query: 719 AEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK-FDSAH 777
H R + + +NLLRMV YCEN+ DCRR L +FGE F+
Sbjct: 361 ---------HMDKEATYESR--KVHMDNLLRMVQYCENESDCRRAQLLHYFGETDFNPEL 409
Query: 778 C----KKTCDNCSKIKSFIEKDVTDTAKKLVELV--------------KLTGQQFSSSHI 819
C + TCDNC +F KDVT AK +VE V Q ++ H+
Sbjct: 410 CTSDPRTTCDNCKLEGAFEMKDVTTEAKMVVEFVRSVGGNSSGGGGRRGWGVQGYTLLHV 469
Query: 820 LEVFR----------------------GSLNQYVKKHRHETLSLHGAGKHLAKSEASRIL 857
+VF+ GS N+ + H L+ G ++ +A R++
Sbjct: 470 TDVFKGNAPSFCLLVSFLTTISTFNILGSSNKKIMDTDHHKYPLYNYGAAFSRHDAERLM 529
Query: 858 RHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLS-KS 916
R LV E L E++ +VV R + +L K+
Sbjct: 530 RKLVTEGVLAEDL----------------------------HVVPRVEQVVAYVRLGLKA 561
Query: 917 DVTPAKGSLLSGKLSPSRNDTPSQPQNEV-----DLNLSA--KLYSSLRMLRTLLVKEAG 969
D +++SG++ + Q V D N S KL+ L+ L L E
Sbjct: 562 D------AVVSGRMKVRTSCICIHSQRAVVAKNQDSNASVWEKLFIELQSLCKDLANE-- 613
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
V ++HIF TL+ +S++VPR E ++LEI+G+ + K+ K+G + L+ I++
Sbjct: 614 NSVQSHHIFPPQTLREMSRKVPRNEHDMLEIDGVSERKLYKFGPQFLDVIDN 665
>gi|256271606|gb|EEU06648.1| Sgs1p [Saccharomyces cerevisiae JAY291]
Length = 1447
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|259148775|emb|CAY82020.1| Sgs1p [Saccharomyces cerevisiae EC1118]
Length = 1447
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|323336083|gb|EGA77356.1| Sgs1p [Saccharomyces cerevisiae Vin13]
Length = 1447
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|190408415|gb|EDV11680.1| ATP-dependent helicase SGS1 [Saccharomyces cerevisiae RM11-1a]
Length = 1447
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|349580478|dbj|GAA25638.1| K7_Sgs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1447
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|6323844|ref|NP_013915.1| Sgs1p [Saccharomyces cerevisiae S288c]
gi|464912|sp|P35187.1|SGS1_YEAST RecName: Full=ATP-dependent helicase SGS1; AltName: Full=Helicase
TPS1
gi|349194|gb|AAA35167.1| bps. 390..881 = homology to E.coli recQ; bps. 414..430 = ATP binding
site [Saccharomyces cerevisiae]
gi|642282|emb|CAA87811.1| Tps1p [Saccharomyces cerevisiae]
gi|726279|gb|AAB60289.1| Sgs1p [Saccharomyces cerevisiae]
gi|285814193|tpg|DAA10088.1| TPA: Sgs1p [Saccharomyces cerevisiae S288c]
Length = 1447
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|392297356|gb|EIW08456.1| Sgs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1341
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 554 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 613
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 614 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 671
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 672 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 731
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 732 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 791
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 792 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 851
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 852 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 911
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 912 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 956
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 957 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1016
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1017 QANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1074
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1075 LLTGKMEIKMQFTISAPNS 1093
>gi|358339333|dbj|GAA38465.2| bloom syndrome protein homolog [Clonorchis sinensis]
Length = 949
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 268/686 (39%), Positives = 381/686 (55%), Gaps = 70/686 (10%)
Query: 363 EGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKS 422
+GS + + FP + K+ K+FG SFR NQ + INA + G D FV+MPTGGGKS
Sbjct: 187 DGSTGEFDGTDKFPHSAKMMEAFSKLFGLKSFRRNQLQAINAALLGLDCFVIMPTGGGKS 246
Query: 423 LTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSD 482
L YQLPA + G+TLVISPL +L+ DQ+ + I A L+G TE + L+
Sbjct: 247 LCYQLPAAVQDGLTLVISPLKALVLDQVTKMQSLGIVAAHLTGEATMTESDRVYASLHLA 306
Query: 483 YCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGI 542
+ KLLYVTPEK+A SD L LE L R LL R VIDEAHCVSQWGHDFRPDY+ L I
Sbjct: 307 TLRTKLLYVTPEKIAASDKLKGCLEQLYRRNLLQRFVIDEAHCVSQWGHDFRPDYRNLSI 366
Query: 543 LKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD--------CEK 594
L+ FP P++A+TATAT V+ED++ L + N F QSFNR NL + C K
Sbjct: 367 LRTNFPKVPMMAMTATATPRVREDILHQLKMKNTKWFIQSFNRTNLKFEVRPKKLKSCTK 426
Query: 595 VAERLQVGLS-----YGHFFLL--KEFYVVSLE---CGHKAAFYHGSIDPAQRAFVQKQW 644
E ++V S G + L +E +V+ E G A+ YH + AQR +Q+ W
Sbjct: 427 --EIIEVIHSEFPRRSGIVYCLSRRECDLVAEELSRAGLAASAYHAGMTDAQRRRIQEAW 484
Query: 645 -SKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
+D+ I+CAT+AFGMGI+KPDVRFVIHHSLPKSIEGY+QE GR+GRDG ++C+LYY
Sbjct: 485 IQEDKCKIVCATIAFGMGIDKPDVRFVIHHSLPKSIEGYYQEAGRSGRDGLPATCILYYH 544
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
+ D +R++ +I QG TPG N F AN ++ + E L RMVSYCEN +DCRR
Sbjct: 545 WHDVVRLRKLI-QGD------TPGSNAF--AN----VQLHEEALFRMVSYCENQIDCRRR 591
Query: 764 LQLVHFGEKFDSAHCKKT----CDNCSKI--KSFIEKDVTDTAKKLVELVK---LTGQQF 814
L HFGE FD+A C CDNC + + ++DVT+ A +V V + +
Sbjct: 592 QILSHFGEAFDAADCGLVVGCMCDNCQQADRRRLEQRDVTEDAVLIVRAVDGFVRSRRNV 651
Query: 815 SSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD 874
+ ++ ++VFRG+ +++ + L+ G +K++A R+ LV E L EE+ +
Sbjct: 652 TINYCVDVFRGAQTSQIQRAQDNLNPLYNRGASYSKTDAERLFHRLVAESVLYEELTVTH 711
Query: 875 VYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR 934
V+ V SKA L+ G ++ + P ++ S G+ + +
Sbjct: 712 QDHVVAYVRP--GSKAVRLLEG--SLKIHLPMSMPSR----------PGAAEAKMIGREP 757
Query: 935 NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYH-IFGNATLQHLSKRVPRT 993
D ++ +NE Y L + + E +G+ Y +F N L ++ +P T
Sbjct: 758 EDRYAKIRNEC--------YEELVQVAKQMTSE--QGISNYATVFPNEMLLEMAAHLPTT 807
Query: 994 EEELLEINGIGKAKVSKYGV--RLLE 1017
EELL++ + K++++ R LE
Sbjct: 808 REELLQVPQCTEYKLNRFNAQDRFLE 833
>gi|323307639|gb|EGA60904.1| Sgs1p [Saccharomyces cerevisiae FostersO]
Length = 1396
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKAMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|50292717|ref|XP_448791.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528104|emb|CAG61761.1| unnamed protein product [Candida glabrata]
Length = 1371
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 255/681 (37%), Positives = 371/681 (54%), Gaps = 65/681 (9%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----C 432
WTK++ K VF SFR NQ E INAT+SG DVFVLMPTGGGKSL YQLPA++
Sbjct: 611 WTKEVYKKLKTVFNLTSFRSNQEEAINATLSGKDVFVLMPTGGGKSLCYQLPAIVKGGCT 670
Query: 433 PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
G T+VISPL+SL+QDQ+ HL + N+ A LS E+ + + L+Y++
Sbjct: 671 KGTTIVISPLISLMQDQVEHLQKLNVKARMLSSKGGIDEKNHTFNLFINGFLD--LIYLS 728
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE ++ S+ +E L + LARIV+DEAHCVS WGHDFRPDY+ L K ++P+ P+
Sbjct: 729 PEMISVSEKCKTAIEKLYQNKQLARIVVDEAHCVSNWGHDFRPDYKQLSYFKVQYPDIPM 788
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAE--R 598
+ALTATA+ V+ D+V L L + + RQSFNR NL+ + C+ + + R
Sbjct: 789 MALTATASEQVQMDIVFNLKLKDNLFLRQSFNRTNLYYEVRKKTKNTIFEICDTIKQQFR 848
Query: 599 LQVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
Q G+ Y H E ++ G K A+YH ++ +R VQ++W D + +ICATVA
Sbjct: 849 NQTGIIYCHSKNSCEQTAQQMQRNGIKCAYYHAGMEADERLQVQREWQNDNLQVICATVA 908
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGI+K DVRFV H ++P+++EGY+QE GRAGRDG S C+ YYS+ D ++ MI
Sbjct: 909 FGMGIDKADVRFVFHFTVPRTLEGYYQETGRAGRDGNYSYCITYYSFRDVRTMQTMI--- 965
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
++ G N+ + + + L ++ +YCEND DCRR L L +F E+FD +
Sbjct: 966 --QKDKNLDGINK----------QKHLDKLQQVTAYCENDTDCRRKLVLSYFSEEFDPIN 1013
Query: 778 CKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKH 834
C K CDNC S E+DVT TA +V+LV+ + Q+ + + +F+GS N + +
Sbjct: 1014 CNKNCDNCRNSSSVTKEERDVTSTAISIVKLVQSIQNQKVTLIYCQNIFKGSRNSKIVQA 1073
Query: 835 RHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLI 894
H+ L HGAGK+L KSE RI HL+ + L E K ++ G SS +KV +L+
Sbjct: 1074 GHDMLPQHGAGKNLTKSEIERIFFHLITKRILQEYSKVNNA-GFSSSYVKVGDG-CRDLL 1131
Query: 895 IGRQNVVLRFP----SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQ--------PQ 942
G+ + ++F ++ +S L KS+ + S + + N+ Q P
Sbjct: 1132 NGKLQLKIQFSVSEGNSRSSAGLPKSNSSNTNNYDRSLTKNITANNDSEQHLRNYAYSPS 1191
Query: 943 NEVDLNLSAK-----------LYSSLRMLRTLLVKEAGEGVMAYHIF-GNATLQHLSKRV 990
N + + L S+ LR + V A + F + L+ L+ +
Sbjct: 1192 NSERMRAESSKHTGSTQEVNDLKSAYDRLRNAAISWGSRMVPAVNKFMDDNVLRRLAAIL 1251
Query: 991 PRTEEELLEINGIGKAKVSKY 1011
P TEEE + I G KY
Sbjct: 1252 PATEEEFIGIVGNNSTDSKKY 1272
>gi|301106430|ref|XP_002902298.1| bloom syndrome protein [Phytophthora infestans T30-4]
gi|262098918|gb|EEY56970.1| bloom syndrome protein [Phytophthora infestans T30-4]
Length = 1022
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/543 (41%), Positives = 320/543 (58%), Gaps = 71/543 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG+++FRP+Q + SG DVFVLMPTGGGKSL +QLPA I G+T+VISPLVSL
Sbjct: 213 RDVFGHNAFRPSQERTVMEAFSGRDVFVLMPTGGGKSLCFQLPACIDDGVTIVISPLVSL 272
Query: 446 IQDQIMHLLQANIPATFLSGNMEW-TEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLR 504
IQDQ+ L ++ L G+ ++ TEQ+ I+ EL S+ + K+LYVTPEK+A S +L
Sbjct: 273 IQDQVQQLEALDVGVANLKGDQDYATEQRPIISELFSNQIRIKMLYVTPEKIASSGMLSN 332
Query: 505 QLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
+SL R LLAR VIDEAHC+SQWGHDFR DY LG L+ KFP+ P++ALTATA + +
Sbjct: 333 LFKSLEKRGLLARFVIDEAHCISQWGHDFRKDYLNLGTLRTKFPSVPIMALTATANSQTE 392
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWM---------------------------------D 591
D+V+ L L N I R SFNRPNL D
Sbjct: 393 ADIVKNLKLRNPFITRSSFNRPNLTYDVRKKTSKFMSEIADFVRKHIDDSGIIYCLSKKD 452
Query: 592 CEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
CE+ AE+L L + H + +FYH ++ RA+ +WSK +I +
Sbjct: 453 CEQTAEKLIKALGFEH-----------TRKASQISFYHAGLEAGDRAYRHHEWSKGKIKL 501
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
ICATVAFGMGINKPDVR+VIHH++P+S+ Y+QE GRAGRDG+ ++C+LYYS+ D R +
Sbjct: 502 ICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAGRDGEVANCILYYSFLDLTRRR 561
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
+I++ +R N+ + + +NL RM +CEN V+CRR L +FGE
Sbjct: 562 KLITK------------DRDNMQHRN----VHLQNLRRMTEFCENQVECRRTSLLEYFGE 605
Query: 772 KFDSAHCKKTCDNC-SKIK--SFIEKDVTDTAKKLVELVKL---TGQQFSSSHILEVFRG 825
F S C TCDNC +K+ SF + DVT+ L E++K +G + I +VF G
Sbjct: 606 HFSSEQCHGTCDNCKNKVLGISFEKSDVTEDCVALAEMIKTLQGSGDPTTLVQIAQVFLG 665
Query: 826 SL--NQYVKKHRHETLSLHGAGK-HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV 882
+ + K+++ E L G GK ++SE RIL H+++ +L EV +++ G ++
Sbjct: 666 MVVKGREWKQNQFEQLGGFGKGKGRYSRSEVERILYHMILRQYL-REVDQTNAKGFTTTF 724
Query: 883 LKV 885
L +
Sbjct: 725 LSL 727
Score = 48.5 bits (114), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKT 1029
E +M YHI + ++ VP + ELLEI+G+G+ +V KYG ++ +++ +++ T
Sbjct: 855 ENLMPYHILTTGGIASIANAVPVSNAELLEIDGVGRIRVKKYGAAIINIVKTYLEKNNLT 914
Query: 1030 DKNGSSSNDSN--------DSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKT 1081
+ +N DSG + AP ++ D ++K++AS + +
Sbjct: 915 PSPVQAVRSTNVLDSLEVLDSGVEVIEVPAAPKSSPFFQD-------KNKRKASSTSTRP 967
Query: 1082 VEVINHNEPDSYECVDDLDFDEYE 1105
N D + +DD+D+ E +
Sbjct: 968 TATANRIVID--DSLDDIDWGELD 989
>gi|332238724|ref|XP_003268551.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Nomascus
leucogenys]
Length = 1417
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/691 (38%), Positives = 381/691 (55%), Gaps = 87/691 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 642 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 701
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG T+ ISPL SLI D + L +IPAT+L+G+ +E I +L+ K
Sbjct: 702 PACVSPGDTIEISPLRSLIVDPVQKLTSLDIPATYLTGDKTDSETTNIYLQLSKKDPIIK 761
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+ S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + IL+QKF
Sbjct: 762 LLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNILRQKF 821
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 822 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 881
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D
Sbjct: 882 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQ 941
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 942 VICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 1001
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1002 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1046
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K ++ V K G
Sbjct: 1047 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIIRFVQEHSSSQGTRNIKHVGPS 1106
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1107 GRFTMNMLVDIFLGSKSAKLQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1160
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA ++ G N+ + F NS+ + K AK S
Sbjct: 1161 INANDQAIAYVMLGN--KAQTVLNG--NLKVDFMETENSSSVKKQKALVAKVS------- 1209
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1210 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1252
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1253 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1283
>gi|365763903|gb|EHN05429.1| Sgs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1314
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 331/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|295673364|ref|XP_002797228.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282600|gb|EEH38166.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1550
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/581 (41%), Positives = 339/581 (58%), Gaps = 48/581 (8%)
Query: 372 SWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI 431
S +PW+K +++ FG FR NQ E INAT+SG D FVLMPTGGGKSL YQLPA++
Sbjct: 674 SLQYPWSKDVKSALLHRFGLSGFRLNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVV 733
Query: 432 ----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYCKY 486
G+T+VISPL+SL++DQ+ HL + +I A L+G++ + I L N + K
Sbjct: 734 NSGTTKGVTVVISPLLSLMEDQVAHLKELHIQAFLLNGDVSKEHKSLIYSALANPNVEKL 793
Query: 487 -KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQ 545
+LLYVTPE V K+ LL L L++R+ LARIVIDEAHCVSQWGHDFRPDY+ LG +
Sbjct: 794 IQLLYVTPEMVNKNGALLGALSHLHSRKKLARIVIDEAHCVSQWGHDFRPDYKELGNTRA 853
Query: 546 KFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKV 595
KFP P++ALTATAT +VK DV+ LG+ N +F QSFNRPNL + E +
Sbjct: 854 KFPGIPLMALTATATENVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPKNTNVIESI 913
Query: 596 AERL------QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKD 647
AE + Q G+ Y E L + KAA YH + +R +Q+ W
Sbjct: 914 AETINESYSGQAGIIYCLSRQSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSG 973
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
+ N+I AT+AFGMGI+K DVRFVIHH++PKS+EGY+QE GRAGRDG+RS C LYY + D
Sbjct: 974 KYNVIVATIAFGMGIDKADVRFVIHHTIPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDT 1033
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
++HMI + G F R + L +V +CEN+ DCRR+ L
Sbjct: 1034 GPLRHMIDK----------GEGSFEQKKRQRQM------LRHVVQFCENESDCRRVQILA 1077
Query: 768 HFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGS 826
+F EKF+ +C ++CDNC +F D TD A V LV +L Q+ ++ + +++FRG+
Sbjct: 1078 YFNEKFERENCNRSCDNCKSDLTFESMDFTDLAVSAVNLVGRLEKQKVTTLYCVDIFRGA 1137
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV-LKV 885
++ H+ G G L +S+ R+ +L+ E+ L EE ++ + + V L V
Sbjct: 1138 TRKFADSE-HKYFPEFGVGSELDRSDVQRLFSYLLCEEALKEENVINNAHFATQYVQLGV 1196
Query: 886 NQSKAHNLIIGRQNVVL--RFPSAINSTKLSKSDVTPAKGS 924
+A + R+ ++L R + +T L+K T +G+
Sbjct: 1197 ---RASEFLNRRRKIMLPIRVSANRKATSLAKPAATRNRGT 1234
>gi|453080950|gb|EMF09000.1| ATP-dependent DNA helicase [Mycosphaerella populorum SO2202]
Length = 1518
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/524 (42%), Positives = 309/524 (58%), Gaps = 44/524 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
FPW++++ KVF FR NQ + INAT+SG DVFVLMPTGGGKSLTYQLPALI
Sbjct: 604 FPWSQEVADRLTKVFKMKGFRENQFQAINATLSGKDVFVLMPTGGGKSLTYQLPALIQTG 663
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK--YKL 488
G+T+V+SPL+SL+QDQ+ HL Q I A ++G +++ ++ L + +L
Sbjct: 664 KTRGVTVVVSPLLSLMQDQVQHLKQLGIQAFLINGETTPEDKRRVMDALWKPNVEQFVQL 723
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE + KS+ +LR E L+ R AR+VIDEAHCVSQWGHDFRPDY+ LG ++Q+FP
Sbjct: 724 LYVTPEMLGKSENMLRAFEGLHRRGKFARLVIDEAHCVSQWGHDFRPDYKNLGEIRQRFP 783
Query: 549 NTPVLALTATATASVKEDVVQALGLV-----NCIIFRQSFNRPNLW-------------- 589
P++ALTATAT V+ED + LG+ C +F QSFNR NL+
Sbjct: 784 GVPLMALTATATTRVREDTMHNLGMEKNNPDKCQVFTQSFNRENLYYEVRPKPKGKEGIS 843
Query: 590 --MDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHK--AAFYHGSIDPAQRAFVQKQWS 645
D K + + G+ Y E +L+ HK A YH + ++++ VQ++W
Sbjct: 844 AMADIIKDSHPRETGIIYCLSRANCEDIAKALQKTHKIRAQHYHAGLKGSEKSMVQEEWQ 903
Query: 646 KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYS 705
I +I AT+AFGMGI+K +VRFVIHH++PKS+EGY+QE GRAGRDG S C L Y Y
Sbjct: 904 AGRIKVIVATIAFGMGIDKSNVRFVIHHTIPKSLEGYYQETGRAGRDGNPSRCYLLYGYG 963
Query: 706 DFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
D +++ MI E S V + + L +M+ YCEN DCRR+
Sbjct: 964 DAGKLRRMIDDPKNE--------------GSREVKDMQHQMLRKMIQYCENRSDCRRVQV 1009
Query: 766 LVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFR 824
L +F E+FD A C CDNC +F E ++T A++ + LV+ + + + H ++VFR
Sbjct: 1010 LSYFNERFDKADCHGGCDNCQSESTFQEVNLTKEAEQAINLVRQVKTHKVTILHCIDVFR 1069
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
G ++ K H L GAG HL + + R+ HL+ E+ ++E
Sbjct: 1070 GGMSAKAKALNHLDLPEAGAGSHLNRGDVERLFYHLLNEEAIVE 1113
>gi|260949491|ref|XP_002619042.1| hypothetical protein CLUG_00201 [Clavispora lusitaniae ATCC 42720]
gi|238846614|gb|EEQ36078.1| hypothetical protein CLUG_00201 [Clavispora lusitaniae ATCC 42720]
Length = 1408
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 254/687 (36%), Positives = 368/687 (53%), Gaps = 77/687 (11%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLV 443
VF FRPNQ E + A ++G DVFVL+PTGGGKSL YQLPAL+ G+T+VISPL+
Sbjct: 667 VFKLPDFRPNQLEAVVAALNGKDVFVLIPTGGGKSLCYQLPALVKGGKTRGVTIVISPLI 726
Query: 444 SLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
SL+QDQ+ HL NI A +S E+ +REL S + L+Y++PE V S+++
Sbjct: 727 SLMQDQVQHLRDRNINAAMISSRGTTEEKHAAIRELTSG--QLDLVYLSPEMVNSSNMIQ 784
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
R L L +LAR+V+DEAHCVS WGHDFRPDYQG+ + K+KFP P++ALTATA V
Sbjct: 785 RVLSKLYESNMLARVVVDEAHCVSSWGHDFRPDYQGMSLFKEKFPEVPIMALTATANEKV 844
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL--------------QVGLSYGHFF 609
+ D+V L + N ++ +QSFNR NL+ + L + G+ Y H
Sbjct: 845 RLDIVHHLRMKNLVLLKQSFNRTNLFYEVRNKPPNLYEWIRDYVMGKMAGKTGIIYCHSK 904
Query: 610 LLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L + G K +YH +DP +R VQ QW ++I +ICAT+AFGMGI+KPDVR
Sbjct: 905 QSCETTAQKLNDWGIKCMYYHAGMDPNERFDVQTQWQHNKIQLICATIAFGMGIDKPDVR 964
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FVIH +PKS+EGY+QE GRAGRDG+ S C+++YSY D ++ +I +
Sbjct: 965 FVIHMYIPKSLEGYYQETGRAGRDGKESECIMFYSYKDARALQSLIQRDR---------- 1014
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
N+ S R E++ L ++V YCEN DCRR L F E FD A+C + CDNC
Sbjct: 1015 ---NLEESAR--ESHLSKLRQVVQYCENKTDCRRKQVLHFFNESFDPANCARKCDNCCSD 1069
Query: 789 KSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +DVT+ +V++V+ L + + H +V++GS + K H HG G+
Sbjct: 1070 VVSVTRDVTEHCSNIVKMVQSLQADKVTVIHCQDVYKGSRGNKILKLGHHENPYHGKGRE 1129
Query: 848 LAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF-- 904
L + + RI HL +D L+E +V K G S+ +K+ A++++ GR V L F
Sbjct: 1130 LDRGDMERIFFHLQSQDCLLEYQVMKG---GFASTYVKLG-PNANSVLSGRNRVQLSFAQ 1185
Query: 905 ---PSAINST---KLSKSDVTPAKGSL-LSGKLSPSRNDTPSQPQNEVDLNLSA------ 951
PS NS +L+ S G L +R Q + +++ S+
Sbjct: 1186 NSRPSTGNSNRAPRLTASGNGSGIGHLRYQESFVSAREVRYEQEKENINVERSSSKITLE 1245
Query: 952 -----------------KLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTE 994
+ Y LR LR +E G G + + L+ ++ ++P
Sbjct: 1246 KHTFDGAVNASNEQAVEQAYHELRNLRLQKSEELGYG-RPHFFMSDTLLKEMAVKLPTNA 1304
Query: 995 EELLEINGIGKAKVS--KYGVRLLETI 1019
+ ++ I K +VS +Y RLL T+
Sbjct: 1305 RDFAKLQNISKDQVSHFQYFKRLLGTL 1331
>gi|327265368|ref|XP_003217480.1| PREDICTED: Bloom syndrome protein homolog [Anolis carolinensis]
Length = 1383
Score = 418 bits (1074), Expect = e-113, Method: Compositional matrix adjust.
Identities = 262/689 (38%), Positives = 384/689 (55%), Gaps = 85/689 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ FP + ++ K FG H FR NQ+E INA + G D FVLMPTGGGKSL YQL
Sbjct: 621 ERFRGCSFPHSNEMMKVFHKRFGLHHFRTNQQEAINAALLGEDCFVLMPTGGGKSLCYQL 680
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA I G+T+VISPL SLI DQ+ L +IPAT+L+G+ E I +L+ K
Sbjct: 681 PACILVGVTIVISPLRSLIVDQVQKLTSMDIPATYLTGDKTDAEASRIYMQLSKKDPIIK 740
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ L +L++KF
Sbjct: 741 LLYVTPEKVCSSGRLMSTLENLYQRQLLARFVIDEAHCVSQWGHDFRQDYKRLNMLRKKF 800
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----EKVA-ERLQV 601
+ P++ALTATA V++D++ L ++ +F SFNR NL D + VA + LQ
Sbjct: 801 ASVPMMALTATANPRVQKDILNQLEMLKPQVFSMSFNRHNLKYDVLPKRPKSVALDCLQW 860
Query: 602 GLSY-----GHFFLLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
Y G + L + S+ + G A YH + R VQ++W ++D
Sbjct: 861 IRKYHPYDSGIIYCLSRYECDSMASNLQKAGLSALAYHAGLPDETRDIVQQKWINQDGCQ 920
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
IICAT+AFGMGI+KPDVRFVIH SLPKSIEGY+QE GRAGRDG+RS C+L+YSYSD R+
Sbjct: 921 IICATIAFGMGIDKPDVRFVIHASLPKSIEGYYQESGRAGRDGERSHCLLFYSYSDVTRL 980
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
+ +I S H R +T+ NL MV YCEN V+CRR+ L +FG
Sbjct: 981 RRLILMEKDGNS-----HTR----------QTHFNNLYSMVHYCENVVECRRIQLLAYFG 1025
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQQ 813
E F+ CK+ +CDNC K++ + K+VT+ K +V V + G +
Sbjct: 1026 ETGFNPKFCKEYPEVSCDNCCKVQDYNMKNVTEEVKSIVRFVQEHCGEKGARGARRNGGR 1085
Query: 814 FSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKS 873
++ + ++++F G+ + ++ ++G G ++ A R+ R LV++ L EE+ +
Sbjct: 1086 YTLNMMIDIFLGTKSAKIQT------GIYGKGAAYSRHNAERLFRKLVLDKILDEELYIT 1139
Query: 874 DVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPS 933
+V+ V +AH ++ G V + +S + ++ VT K+S
Sbjct: 1140 ANDQAVAYVH--TGERAHVVLSGCLQVEFCETESASSLRKHRASVT---------KIS-- 1186
Query: 934 RNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKRVP 991
Q E ++ + S L T + K G+ V ++IF ATL+ +++ +
Sbjct: 1187 --------QRE---EMAKECLSEL----TDVCKNLGKVFNVHYFNIFNTATLKRIAETLS 1231
Query: 992 RTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1232 SDPEVLLQIDGVTEDKLEKYGAEIIAVMQ 1260
>gi|323303418|gb|EGA57213.1| Sgs1p [Saccharomyces cerevisiae FostersB]
Length = 1423
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/559 (40%), Positives = 330/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ +VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 660 YPWSDEVLYRLHEVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSG 719
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI + S ++++ + L+Y
Sbjct: 720 KTHGTTIVISPLISLMQDQVEHLLNKNIKXSMFSSRGTAEQRRQTFNLFINGLLD--LVY 777
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L A LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 778 ISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 837
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V R
Sbjct: 838 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSR 897
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 898 FKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 957
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ MI
Sbjct: 958 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQ 1017
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1018 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1062
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV+ + ++ + + +VF+GS + +
Sbjct: 1063 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQNERVTIIYCQDVFKGSRSSKIV 1122
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1123 QANHDTLEEHGIGKAMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-AKK 1180
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ + ++F SA NS
Sbjct: 1181 LLTGKMEIKMQFTISAPNS 1199
>gi|429961617|gb|ELA41162.1| RecQ family ATP-dependent DNA helicase [Vittaforma corneae ATCC
50505]
Length = 733
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/491 (45%), Positives = 303/491 (61%), Gaps = 36/491 (7%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VF +FR NQ EII A ++ D+FVLMPTGGGKSL YQLPA+I G+T+VISPL+SL
Sbjct: 164 RNVFNLENFRGNQEEIIKAALNKEDIFVLMPTGGGKSLCYQLPAMIQDGLTVVISPLLSL 223
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
I DQ+ +LL NIPA L+ N ++E+ I++ L + + K++YVTPE + KS
Sbjct: 224 IHDQVSNLLNKNIPAVALNSNCTYSERTLIMKTLQACH-SVKIVYVTPELLNKSTQFSNI 282
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L L+ R L R VIDEAHCVSQWGHDFRPDY+ LGI+K+KFP P++ALTATAT V+
Sbjct: 283 LHELDRRGRLCRFVIDEAHCVSQWGHDFRPDYKELGIIKRKFPRIPLIALTATATKKVEL 342
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSYGHFFLLKE---FYVVS-LE 620
DV+ +LG+ C +FRQSFNRPNL + K + L +S+ H + Y S +
Sbjct: 343 DVLNSLGIEGCKVFRQSFNRPNLKYYVMSKTKKSLTDIVSFVHTYYPNSPGIIYCTSKKD 402
Query: 621 CGH---------KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
C K FYH + +R VQ+ W+ I II AT+AFGMGI+K DVRFVI
Sbjct: 403 CEEMSEKLNEHLKTTFYHAGLSKRERNKVQEMWNDGTIKIIVATIAFGMGIDKSDVRFVI 462
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+SLPKS+EGY+QE GRAGRDG S C+LYY+Y D ++ +I+ + + NR
Sbjct: 463 HYSLPKSLEGYYQETGRAGRDGLESVCILYYNYGDTKTIEFLIANN---HNATSDQKNR- 518
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
E L +V YCEN DCRR L L HFGE FD A C KTCDNC+ ++F
Sbjct: 519 -----------QREELKYVVQYCENKTDCRRKLVLSHFGENFDPAECNKTCDNCT--RNF 565
Query: 792 IE-KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
+ KD + AK+++ L++ ++ S ++ +RGS N+ K + G GK L K
Sbjct: 566 TKTKDYSKQAKEILSLIR-DAEKISFIQAVDAYRGSANR--KSLEFSQMPFFGNGKDLKK 622
Query: 851 SEASRILRHLV 861
+E R+L++LV
Sbjct: 623 TEVERVLQYLV 633
>gi|366995175|ref|XP_003677351.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
gi|342303220|emb|CCC70998.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
Length = 989
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/592 (39%), Positives = 351/592 (59%), Gaps = 52/592 (8%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI-- 431
+FPWT +++ F FRPNQ E IN+T+SG DVFVLMPTGGGKSL YQLPA++
Sbjct: 331 NFPWTPEVDYRLHHTFKLPGFRPNQLEAINSTLSGKDVFVLMPTGGGKSLCYQLPAVVKS 390
Query: 432 --CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK--YK 487
G T+VISPL+SL+QDQ+ HLL NI A+ +S + T QQ ++ + + K
Sbjct: 391 GRTKGTTIVISPLISLMQDQVAHLLDLNIKASMISS--KGTTQQR--KQTFNLFVKGLLD 446
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
L+Y++PE ++ S R +++L + LARIV+DEAHCVS WGHDFRPDY+ L K ++
Sbjct: 447 LIYISPEMISASKQCKRAIQTLYQQGKLARIVVDEAHCVSSWGHDFRPDYKQLNFFKNEY 506
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK--------VAERL 599
PN P++ALTATA V++D++Q L L + + +QSFNR NL+ + K +A+ +
Sbjct: 507 PNIPMMALTATANEHVRKDIIQNLQLRSPLFLKQSFNRINLFYEVRKKTKDCMVEIADAI 566
Query: 600 ------QVGLSYGHFFLLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
Q G+ Y H E L+ ++ FYH +D +R +Q+ W +++ +I
Sbjct: 567 KFQFTGQSGIIYCHSKNSCEQVSAYLQSKQIRSGFYHAGMDANERLMIQQDWQANKLQVI 626
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
CATVAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG+ S C+ YYS+ D ++
Sbjct: 627 CATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKPSYCITYYSFKDVRTIQK 686
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
MI + + AN E + + L +++SYC+N +CRR L L +F E
Sbjct: 687 MIQRD-----------KDLDRANK----EKHFDKLQQVMSYCDNIHECRRKLVLSYFNEA 731
Query: 773 FDSAHCKKTCDNCSKIKSFIEK--DVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQ 829
FD C K CDNC + I K D+T+ K ++ELV+ + +Q + + ++F+GS N
Sbjct: 732 FDPVACDKNCDNCRNNRDVITKDEDITEVTKNIIELVESVQSEQVTMIYCQDIFKGSRNA 791
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSK 889
+ + H+T+S HGAGK+L K++ RI HL+ L +E ++ G ++ L+ K
Sbjct: 792 KIVQAGHDTISQHGAGKYLDKADMERIFFHLITLQVL-QEYAVTNNSGYATNYLQ-RGPK 849
Query: 890 AHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQP 941
A N++ G V ++F S + + S+ P S GK ++DT S+P
Sbjct: 850 AWNVLNGTMKVTMKFTSHAPNPVDNDSETRP---SSRKGK----KDDTTSEP 894
>gi|225681066|gb|EEH19350.1| ATP-dependent DNA helicase hus2/rqh1 [Paracoccidioides brasiliensis
Pb03]
Length = 1550
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/581 (41%), Positives = 338/581 (58%), Gaps = 48/581 (8%)
Query: 372 SWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI 431
S +PW+K +++ FG FR NQ E INAT+SG D FVLMPTGGGKSL YQLPA++
Sbjct: 675 SLQYPWSKDVKSALLHRFGLSGFRLNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVV 734
Query: 432 ----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYCKY 486
G+T+VISPL+SL++DQ+ HL + +I A L+G++ + I L N + K
Sbjct: 735 NSGTTKGVTVVISPLLSLMEDQVAHLKELHIQAFLLNGDVNKEHKSLIYSALANPNVEKL 794
Query: 487 -KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQ 545
+LLYVTPE V K+ LL L L++R+ LARIVIDEAHCVSQWGHDFRPDY+ LG +
Sbjct: 795 IQLLYVTPEMVNKNGALLGALSRLHSRKKLARIVIDEAHCVSQWGHDFRPDYKELGNTRA 854
Query: 546 KFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKV 595
KFP P++ALTATAT +VK DV+ LG+ N +F QSFNRPNL + E +
Sbjct: 855 KFPGIPLMALTATATENVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPKNTNVIESI 914
Query: 596 AERL------QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKD 647
AE + Q G+ Y E L + KAA YH + +R +Q+ W
Sbjct: 915 AETINESYSGQAGIIYCLSRRSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSG 974
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
+ N+I AT+AFGMGI+K DVRFVIHH++PKS+EGY+QE GRAGRDG+RS C LYY + D
Sbjct: 975 KYNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDT 1034
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
++HMI + G F R + L +V +CEN+ DCRR+ L
Sbjct: 1035 GPLRHMIDK----------GEGSFEQKKRQRQM------LRHVVQFCENESDCRRVQILA 1078
Query: 768 HFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGS 826
+F EKF+ +C ++CDNC +F D TD A V LV +L Q+ ++ + +++FRG+
Sbjct: 1079 YFNEKFEPENCNRSCDNCKSGLTFEPMDFTDLAVSAVSLVGRLEKQKVTTLYCVDIFRGA 1138
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV-LKV 885
++ H+ G G L + + R+ +L+ E+ L EE ++ + + V L V
Sbjct: 1139 TKKFADSE-HKHFPEFGVGSELDRPDVQRLFSYLLCEEALKEENVINNAHFATQYVQLGV 1197
Query: 886 NQSKAHNLIIGRQNVVL--RFPSAINSTKLSKSDVTPAKGS 924
+A + R+ ++L R + +T L+K T +G+
Sbjct: 1198 ---RASEFLNRRRKIMLPIRVSAHRKATSLAKPAATRNRGT 1235
>gi|443898809|dbj|GAC76143.1| hypothetical protein PANT_19d00137 [Pseudozyma antarctica T-34]
Length = 1364
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/571 (41%), Positives = 326/571 (57%), Gaps = 46/571 (8%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI-- 431
D WT+ + + F FR NQ E IN T+ G DVFVLMPTGGGKSL YQLPA +
Sbjct: 631 DHKWTRDVVYTMRHFFKLKRFRANQLEAINGTLMGRDVFVLMPTGGGKSLCYQLPACVDS 690
Query: 432 --CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
GIT+V+SPL+SLIQDQ+ HLL I A L+G+M+ ++Q + E S +L+
Sbjct: 691 GSTKGITIVVSPLLSLIQDQVRHLLSLGIIAAKLTGDMKHADKQTVCAEALSSQSAVRLI 750
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE + +S+ L L+ R+ +AR V+DEAHCVSQWGHDFRP Y LG L+ +PN
Sbjct: 751 YVTPEFIRQSNQAKTLLNDLHRRKRIARFVVDEAHCVSQWGHDFRPHYTELGALRDDYPN 810
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-----KVAERLQVGLS 604
P++ALTATA V +DV + L + + I QSFNRPNL KV E + +
Sbjct: 811 VPIMALTATANERVIKDVKEHLHMKDVIQLSQSFNRPNLEYQVRPKPGNKVLEEISSLIL 870
Query: 605 YGHFFLLKEFYVVSLEC------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINII 652
H Y S E G A YH + RA VQ++W +++ +I
Sbjct: 871 TSHKDQCGIIYCFSRESCETVAHDLSTKYGISAHHYHAKLSADDRAMVQQKWQQNKFRVI 930
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFVIHHS PKS+EGY+QE GRAGRDG+ S C+LYY+Y+D ++K
Sbjct: 931 VATIAFGMGIDKPDVRFVIHHSAPKSLEGYYQETGRAGRDGKSSVCILYYNYADINKMKS 990
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
MI + ++SP E ++L + +C N ++CRR+ L +FGE
Sbjct: 991 MIEKE-EDKSP--------------EAKERAIQSLDDIARFCNNKIECRRVQVLRYFGET 1035
Query: 773 FDSAHCKKTCDNCSKIKSFIE-KDVTDTAKKLVELV-KLTG--QQFSSSHILEVFRGSLN 828
F +A C TCDNC + I +DVT+ AKK V LV KLT Q + S+ ++VFRGS
Sbjct: 1036 FSAAMCHNTCDNCCRKGDTIRTEDVTEMAKKAVRLVQKLTDNRSQLTLSYCVDVFRGSRR 1095
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS 888
+ + + H + +HGAG L EA R+ L E + + K+ + G ++ L V
Sbjct: 1096 KEITRAGHHQIEMHGAGSQLKVDEAKRLFELLCAEKVFRQRMLKNKM-GFNNAYLHVG-P 1153
Query: 889 KAHNLIIGRQNVVLRF----PSAINSTKLSK 915
+A ++ GR+ + ++F PSA T S+
Sbjct: 1154 QAKTVLEGRKKITMQFEQDGPSASAKTSTSR 1184
>gi|431920255|gb|ELK18290.1| Bloom syndrome protein [Pteropus alecto]
Length = 1272
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 253/673 (37%), Positives = 367/673 (54%), Gaps = 97/673 (14%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP T+++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 650 ERFQSLSFPHTREMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 709
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 710 PACVSPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIK 769
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 770 LLYVTPEKVCASNRLISTLENLYERNLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 829
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGH 607
P+ PV+ALTATA V++D++ L ++ RP + +C+ +A+ LQ
Sbjct: 830 PSVPVMALTATANLRVQKDILTQLKIL----------RPQV-RECDTMADTLQKN----- 873
Query: 608 FFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQW-SKDEINIICATVAFGMGINKPD 666
G A YH + + R VQ +W ++D +ICATVAFGMGI+KPD
Sbjct: 874 --------------GLAALAYHAGLSDSARDEVQHKWINQDGCQVICATVAFGMGIDKPD 919
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+K +I + E+
Sbjct: 920 VRFVIHASLPKSVEGYYQESGRAGRDGEVSHCLLFYTYYDVTRLKRLI---LMEKD---- 972
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE-KFDSAHCKK----T 781
+ ET+ NL MV YCEN +CRR+ L +FGE F+ CKK +
Sbjct: 973 --------GNHHTKETHFNNLYSMVHYCENITECRRIQLLAYFGEIGFNPDFCKKYPDVS 1024
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ--QFSSSHILEVFRGSL 827
CDNC K K + +DVTD K ++ V K G +F+ + ++++F GS
Sbjct: 1025 CDNCCKTKDYKTRDVTDVTKNIIRFVQEHSSSQGTRNIKHVGPCGRFTMNMLVDIFLGSK 1084
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQ 887
+ ++ L G G ++ A R+ + L+++ L E++ + ++ V+
Sbjct: 1085 SAKIQS------GLFGKGSTYSRHNAERLFKKLILDKILDEDLYINANDQPIAYVM--TG 1136
Query: 888 SKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDL 947
SKA ++ G V F NS+ + K K S + EV
Sbjct: 1137 SKAQTVLNGHLKV--DFMETENSSSIKKQKALVTKVS----------------QREEVVK 1178
Query: 948 NLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAK 1007
+L + L + GV ++IF ATL+ L++ + E LL+I+G+ + K
Sbjct: 1179 KCLGELTEVCKALGKVF------GVHYFNIFNTATLKKLAESLSSDPEVLLQIDGVTEDK 1232
Query: 1008 VSKYGVRLLETIE 1020
+ KYG ++ ++
Sbjct: 1233 LEKYGAEVIPVLQ 1245
>gi|149690733|ref|XP_001502766.1| PREDICTED: Bloom syndrome protein [Equus caballus]
Length = 1421
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 273/751 (36%), Positives = 394/751 (52%), Gaps = 89/751 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 648 ERFQSLSFPHTKEMMKIFHKKFGLHHFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 707
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 708 PACVSPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIK 767
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 768 LLYVTPEKVCASNRLITTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 827
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L +++ +F SFNR NL +KVA
Sbjct: 828 PSVPVMALTATANPRVQKDILTQLKILSPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 887
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 888 IRKHHPYDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDAVQHKWINQDGCQ 947
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 948 VICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 1007
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ + ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 1008 KRLI---LMEKD------------GNHHTKETHFNNLYSMVHYCENIAECRRIQLLAYFG 1052
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQ------------- 812
E F+ CKK +CDNC K K + +DVT+ K +V V+
Sbjct: 1053 EHGFNPDFCKKYPDVSCDNCCKTKDYKTRDVTEDVKNIVRFVQEHSSSQGMRNIKHLGPS 1112
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G ++ A R+ + L+++ L E++
Sbjct: 1113 GRFTMNMLVDIFLGSKSAKIQS------GIFAKGSAYSRHNAERLFKKLILDKILDEDLY 1166
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ ++ V+ N KA ++ G V F N + + K AK S
Sbjct: 1167 INANDQPIAYVMPGN--KAQTVLNGHLKV--DFMETENYSSVKKQKALVAKVS------- 1215
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1216 ----------QRE---EMVKKCLGEL----TEVCKALGKVFGVHYFNIFNTVTLKKLAES 1258
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDE 1049
+ E LL+I+G+ + K+ KYG ++ ++ + + N + S+ G R
Sbjct: 1259 LSSDPEILLQIDGVTEDKLEKYGAEVIPILQKYSEWTLPAEDNSPRISPSSSRGTGRNAP 1318
Query: 1050 NEAPNANKGDDDDFTKSTA--RSKKRASKSQ 1078
E F T R +KR S SQ
Sbjct: 1319 EEFDEETPISSHYFANKTKNERKRKRISASQ 1349
>gi|401626200|gb|EJS44156.1| sgs1p [Saccharomyces arboricola H-6]
Length = 1463
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/559 (40%), Positives = 330/559 (59%), Gaps = 42/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ ++ + F FRPNQ E +NAT++G DVFVLMPTGGGKSL YQLPAL+
Sbjct: 673 YPWSDEVLYRLHETFKLPGFRPNQIEAVNATLNGKDVFVLMPTGGGKSLCYQLPALVKSG 732
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+V+SPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 733 KTHGTTIVVSPLISLMQDQVEHLLNKNIKASMFSSKGTAEQRRQTFNLFINGLLD--LVY 790
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R + L LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 791 ISPEMISASEQCKRAISRLYTDGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDI 850
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ + C+ V
Sbjct: 851 PMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVKKKTKNTIFEICDAVKSN 910
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G K A+YH ++P +R VQK W DEI +ICAT
Sbjct: 911 FKNQTGIIYCHSKKSCEQTSAQMQKNGIKCAYYHAGMEPDERLSVQKAWQADEIQVICAT 970
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG+ S C+ Y+S+ D ++ MI
Sbjct: 971 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKYSYCITYFSFRDIRTMQTMIQ 1030
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++++YC+N DCRR L L +F E FDS
Sbjct: 1031 KDK-------------NLDRENK--EKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDS 1075
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + I E+DVT+ AKK+V+LV ++ ++ + + ++F+GS + +
Sbjct: 1076 KLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVERIQNERVTIIYCQDIFKGSRSSRIV 1135
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+TL HG GK + KSE RI HL+ L +E + G SS +KV + A
Sbjct: 1136 QANHDTLEEHGLGKAMQKSEIERIFFHLITIRVL-QEYSIMNNSGFASSYVKVGPN-ARK 1193
Query: 893 LIIGRQNVVLRFP-SAINS 910
L+ G+ V ++F SA NS
Sbjct: 1194 LLTGKMGVKMQFTISAPNS 1212
>gi|452978196|gb|EME77960.1| hypothetical protein MYCFIDRAFT_216933 [Pseudocercospora fijiensis
CIRAD86]
Length = 1607
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/566 (40%), Positives = 325/566 (57%), Gaps = 43/566 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
F W+ + + VF FR NQ E INAT+ G DVFVLMPTGGGKSLTYQLPAL+
Sbjct: 688 FRWSPDVGRVLRHVFKLKGFRKNQLEAINATLEGQDVFVLMPTGGGKSLTYQLPALVPTG 747
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL--NSDYCKYKL 488
G+T+VISPL+SL+QDQ+ HL + + AT ++ E+ I+ L +L
Sbjct: 748 KTQGVTIVISPLLSLMQDQVEHLRKLGVQATLINSETSREERDLIMDALWDREPERMVQL 807
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE + KS+ +LR E L+ + LARIVIDEAHCVSQWGHDFRPDY+ LG ++Q+FP
Sbjct: 808 LYVTPEMLGKSEKMLRTFEGLHRKRKLARIVIDEAHCVSQWGHDFRPDYKNLGEVRQRFP 867
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL----------WMDCEKVAER 598
PV+ALTATAT VK D + L + C +F SFNR NL D + +AE
Sbjct: 868 GVPVMALTATATEIVKSDTIHNLSMDGCAVFTSSFNRTNLSYSVLPKPKGKQDVQSMAEV 927
Query: 599 LQ------VGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEIN 650
++ G+ Y E +L H KA YH +D +A VQK+W ++
Sbjct: 928 IKKDHAKDTGIIYCLSRKNCEDIAAALVNEHRIKAKHYHAGMDSIAKADVQKEWQAGHVH 987
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+I AT+AFGMGI+K +VRFVIHHS+PKS+EGY+QE GRAGRDG+ S+C LYY Y D ++
Sbjct: 988 VIVATIAFGMGIDKSNVRFVIHHSIPKSLEGYYQETGRAGRDGKPSACYLYYGYGDAGKL 1047
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
+ MI G H + L +MV YCEN DCRR+ L +FG
Sbjct: 1048 RKMIDDGEGNWDQKDRQH----------------QMLSKMVQYCENKSDCRRVQVLGYFG 1091
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQ 829
E F+ C CDNC+ +F E D T A+ + LV+ L Q+ + H +++FRG+ +
Sbjct: 1092 EAFEPEDCLGGCDNCTSGSTFEEVDYTQHARDAISLVRELRDQKVTILHCIDMFRGANTK 1151
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSK 889
+ +HE ++ G G+ L + + R+ LV E ++EE K+ G V S + + + +
Sbjct: 1152 KGRDAKHEKVAHFGKGEDLDRGDVERLFYRLVNEQAIVEESHKNK-RGFVLSYVNLGR-R 1209
Query: 890 AHNLIIGRQNVVLRFPSAINSTKLSK 915
++ G+ + + S+ +TK+ K
Sbjct: 1210 CNDFAPGKARLKMLIRSSPRATKIVK 1235
>gi|226292234|gb|EEH47654.1| ATP-dependent DNA helicase Q1 [Paracoccidioides brasiliensis Pb18]
Length = 1550
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/582 (41%), Positives = 339/582 (58%), Gaps = 50/582 (8%)
Query: 372 SWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI 431
S +PW+K +++ FG FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 675 SLQYPWSKDVKSALLHRFGLSGFRLNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVV 734
Query: 432 ----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYCKY 486
G+T+VISPL+SL++DQ+ HL + +I A L+G++ + I L N + K
Sbjct: 735 NSGTTKGVTVVISPLLSLMEDQVAHLKELHIQAFLLNGDVNKEHKSLIYSALANPNVEKL 794
Query: 487 -KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQ 545
+LLYVTPE V K+ LL L L++R+ LARIVIDEAHCVSQWGHDFRPDY+ LG +
Sbjct: 795 IQLLYVTPEMVNKNGALLGALSRLHSRKKLARIVIDEAHCVSQWGHDFRPDYKELGNTRA 854
Query: 546 KFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKV 595
KFP P++ALTATAT +VK DV+ LG+ N +F QSFNRPNL + E +
Sbjct: 855 KFPGIPLMALTATATENVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPKNTNVIESI 914
Query: 596 AERL------QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKD 647
AE + Q G+ Y E L + KAA YH + +R +Q+ W
Sbjct: 915 AETINESYSGQAGIIYCLSRRSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSG 974
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
+ N+I AT+AFGMGI+K DVRFVIHH++PKS+EGY+QE GRAGRDG+RS C LYY + D
Sbjct: 975 KYNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDT 1034
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
++HMI + G F R + L +V +CEN+ DCRR+ L
Sbjct: 1035 GPLRHMIDK----------GEGSFEQKKRQRQM------LRHVVQFCENESDCRRVQILA 1078
Query: 768 HFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGS 826
+F EKF+ +C ++CDNC +F D TD A V LV +L Q+ ++ + +++FRG+
Sbjct: 1079 YFNEKFEPENCNRSCDNCKSGLTFEPMDFTDLAVSAVSLVGRLEKQKVTTLYCVDIFRGA 1138
Query: 827 LNQYV-KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV-LK 884
++ +H+H G G L + + R+ +L+ E+ L EE ++ + + V L
Sbjct: 1139 TKKFADSEHKH--FPEFGVGSELDRPDVQRLFSYLLCEEALKEENVINNAHFATQYVQLG 1196
Query: 885 VNQSKAHNLIIGRQNVVL--RFPSAINSTKLSKSDVTPAKGS 924
V +A + R+ ++L R + +T L+K T +G+
Sbjct: 1197 V---RASEFLNRRRKIMLPIRVSAHRKATSLAKPAATRNRGT 1235
>gi|395747150|ref|XP_002825880.2| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Pongo abelii]
Length = 1398
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 264/691 (38%), Positives = 380/691 (54%), Gaps = 95/691 (13%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 631 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 690
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQI PAT+L+G+ +E I +L+ K
Sbjct: 691 PACVSPGVTIVISPLRSLIVDQI--------PATYLTGDKTDSEATNIYLQLSKKDPIIK 742
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+ S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 743 LLYVTPEKICASNRLVSTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 802
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 803 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 862
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D+
Sbjct: 863 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDDCQ 922
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 923 VICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEMSHCLLFYTYHDVTRL 982
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 983 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1027
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K +V V K G
Sbjct: 1028 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGTRNIKHVGPS 1087
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1088 GRFTMNMLVDIFLGSKSAKLQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1141
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ + KA ++ G V F NS+ + K AK S
Sbjct: 1142 INANDQAIAYVMLGD--KAQTVLNGALKV--DFMETENSSSVKKQKALVAKVS------- 1190
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1191 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1233
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1234 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1264
>gi|367009466|ref|XP_003679234.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
gi|359746891|emb|CCE90023.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
Length = 1364
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 258/729 (35%), Positives = 386/729 (52%), Gaps = 95/729 (13%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ ++E +++F FRP+Q E INAT+SG DVFVLMPTGGGKSL YQLPA++
Sbjct: 592 PWSAEVEYRLREIFKLPGFRPHQLEAINATLSGKDVFVLMPTGGGKSLCYQLPAVVKSGK 651
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYV 491
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y+
Sbjct: 652 TKGTTIVISPLISLMQDQVEHLLSNNIKASMFSSKGTAEQRRQTFNLFI--HGLLDLIYI 709
Query: 492 TPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 551
+PE ++ S+ R + L LARIV+DEAHCVS WGHDFRPDY+ L K+++P+ P
Sbjct: 710 SPEMISASEQCKRGINKLYNDGKLARIVVDEAHCVSNWGHDFRPDYKELKYFKREYPDVP 769
Query: 552 VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM--------------DCEKVAE 597
++ALTATA+ V+ D++ L L + +QSFNR NL+ D K+
Sbjct: 770 MIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLFYEILKKTKNSIFEICDTIKIRF 829
Query: 598 RLQVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATV 656
R Q G+ Y H E ++ G K AFYH ++P R +QK W DEI +ICATV
Sbjct: 830 RNQTGIIYCHSKNSCEQTAAQMQRSGIKCAFYHAGMEPDDRLTIQKAWQADEIQVICATV 889
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG+ S C+ Y+S+ D ++ MI +
Sbjct: 890 AFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCMAYFSFRDVRTIQTMIQK 949
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
N+ + E + L +++SYC+N+ DCRR L L +F E FDS
Sbjct: 950 DK-------------NLDRENK--EKHLNKLQQVMSYCDNETDCRRKLVLSYFNEDFDSK 994
Query: 777 HCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKK 833
C K CDNC + E+DVT+ +KK+ LV+ L + + + +VF+GS + + +
Sbjct: 995 LCGKNCDNCRNSSHVMTEERDVTEDSKKIARLVEYLQDYRVTLIYCQDVFKGSRSSKIVQ 1054
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
H+ L LHGAGK + KSE RI HLV L +E + G + +K+ + A L
Sbjct: 1055 AGHDGLELHGAGKTMQKSEIERIFFHLVTTRIL-QEYSIMNNSGFAVNYVKLGPN-AKKL 1112
Query: 894 IIGRQNVVLRFP------------SAINSTKLSKSDVTP------AKGSLLSGKLSPSRN 935
+ G ++ ++F + ++S ++KS P AK + S +
Sbjct: 1113 LNGNLDIKMQFTKSAPGSRSTSAGTTVSSKAVTKSAAKPLPTKAAAKEHIKSFAYEEHQT 1172
Query: 936 DTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAY-------------------H 976
T + P + L+ +YS +E GE AY +
Sbjct: 1173 KTSAGP-----IALNNNMYSH-------STQELGELTYAYEKLRETSLNIGNRMNPPVAN 1220
Query: 977 IFGNATLQHLSKRVPRTEEE---LLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNG 1033
+ L+ L+K +P TEEE LL++ + + + ++E + I + NG
Sbjct: 1221 FVSDLVLKKLAKILPVTEEEFNGLLDVTDKNRNRFKYFKSTIMELRKRKIGLLVAS--NG 1278
Query: 1034 SSSNDSNDS 1042
+S +N S
Sbjct: 1279 DTSTSTNHS 1287
>gi|449304030|gb|EMD00038.1| hypothetical protein BAUCODRAFT_63664, partial [Baudoinia
compniacensis UAMH 10762]
Length = 533
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/524 (42%), Positives = 309/524 (58%), Gaps = 41/524 (7%)
Query: 371 SSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPAL 430
+ + +PW+ ++ ++ F FR NQ + INAT++G D F+LMPTGGGKSL YQLP+L
Sbjct: 11 AQFRYPWSHDVKVALRERFRLKGFRENQLQAINATLAGKDTFILMPTGGGKSLCYQLPSL 70
Query: 431 ICPG----ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK- 485
I G +T+V+SPL+SL++DQ+ HLL+ I A ++G E+ +I L +
Sbjct: 71 ITTGKTKGVTVVVSPLLSLMEDQVQHLLELGIQAFLVNGESTAGEKNQIREALGQRDAQE 130
Query: 486 -YKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ LYVTPE ++K++ +L E L R LARIVIDEAHCVSQWGHDFRPDY+ LG ++
Sbjct: 131 FIQCLYVTPEMLSKNESMLSIFERLYQRRQLARIVIDEAHCVSQWGHDFRPDYKLLGNVR 190
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM----------DCEK 594
Q+FP PV+ALTATAT +VK DV+ L + +C IF +SFNRPNL+ D E
Sbjct: 191 QRFPEVPVMALTATATDAVKLDVIHNLHIDSCEIFTRSFNRPNLYYEVRPKESKGKDLES 250
Query: 595 VA------ERLQVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSK 646
+A R Q G+ Y E L H KAA YH + QR+ QKQW
Sbjct: 251 IATLIKERHRGQSGIIYCLSRKNCEDMAADLVKQHKVKAAHYHAGLTSEQRSKAQKQWQS 310
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
++I AT+AFGMGI+K DVRFVIH+S+PKS+EGY+QE GRAGRDG+ S C L+Y YSD
Sbjct: 311 GTYHVIVATIAFGMGIDKADVRFVIHNSIPKSLEGYYQETGRAGRDGKHSGCYLFYGYSD 370
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
+++ MI G H + L +MV +CEN DCRR+ L
Sbjct: 371 AGKLRRMIDDGEGSHEQKDRQH----------------QMLRKMVQFCENRSDCRRVQVL 414
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRG 825
+F E F C+ CDNC +F KD TD A + + LV K++ + + H +++FRG
Sbjct: 415 AYFSEVFHQDECQNQCDNCKSTSTFETKDFTDLAAQAISLVRKVSMDKVTVLHCIDIFRG 474
Query: 826 SLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
S ++ +K H LS GAGKH+ + R+ L+ E+ + E+
Sbjct: 475 SESKKIKDKGHNDLSEFGAGKHMGRENVERLFYRLLGENVIRED 518
>gi|303390001|ref|XP_003073232.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302377|gb|ADM11872.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 762
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/501 (43%), Positives = 310/501 (61%), Gaps = 36/501 (7%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VF FR NQRE+I A +SG DVFVLMPTGGGKS+ YQLPAL+ G+T+V+SPL+SL
Sbjct: 226 REVFKMKEFRTNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYEGVTIVVSPLLSL 285
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQI++LLQ +I A ++ N+ TE++ + L SD K+ YVTPE +AKS
Sbjct: 286 VQDQILNLLQKDILALPINSNLSRTERRLVFEALGSDELICKIFYVTPELIAKSGHFHEV 345
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ L R L R VIDEAHCVSQWGHDFRPDY+ LG +++++P+ P++ALTATAT V+
Sbjct: 346 VSGLVRRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSIRRRYPSVPIIALTATATKKVEL 405
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQ---VGLSYGHF---------FLLKE 613
D+++ LG+ C F+ SFNR NL + ++ V HF KE
Sbjct: 406 DILENLGIRGCETFKMSFNRANLRYEVRAKTSTVELDIVSFVQTHFPDCCGIIYCTSKKE 465
Query: 614 FYVVS--LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
++S L+ K AFYH + +R VQ++W+K E +I AT+AFGMGI+K DVRFVI
Sbjct: 466 CEMISEKLKKHMKTAFYHAGLSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVI 525
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ +PKS+EGY+QE GRAGRDG S CVL+Y+Y D ++ MI +G G+ +
Sbjct: 526 HYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKG-------DGGYEQ- 577
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ E+L ++ +CEN DCRR+ L HFGEKFD C+KTCDNC + ++
Sbjct: 578 --------KQRQKEDLEAVIQFCENKTDCRRMQVLAHFGEKFDPQLCRKTCDNCRR-ETI 628
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS-LHGAGKHLAK 850
+++D + A+ L+ LV T + + ++V++G N KK R + S +G GK L K
Sbjct: 629 VKRDYSKEARDLILLV-YTSSRITLCQAVDVYKGLSN---KKSREYSWSEYYGKGKLLRK 684
Query: 851 SEASRILRHLVIEDFLMEEVK 871
RILR L+ ++ E V+
Sbjct: 685 ITIERILRSLISHGYIQERVE 705
>gi|241952456|ref|XP_002418950.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
gi|223642289|emb|CAX44258.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
Length = 1164
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 253/682 (37%), Positives = 375/682 (54%), Gaps = 58/682 (8%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLV 443
VF SFRPNQ E + AT+S DVFVLMPTGGGKSL YQLPAL+ G T+VISPL+
Sbjct: 435 VFKLQSFRPNQLEAVVATLSSKDVFVLMPTGGGKSLCYQLPALVKSGATKGTTVVISPLI 494
Query: 444 SLIQDQIMHLLQANIPATFLS---GNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
SL+QDQ+ HLL NI A S GN + + RE D ++Y++PEK KS
Sbjct: 495 SLMQDQVQHLLAKNIKAGMFSSKGGNDDNKHTIHLFREGFLD-----IVYLSPEKANKSS 549
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
++ + + L LAR+VIDEAHC+S WGHDFRPDYQGLG K KFP P++ALTATA
Sbjct: 550 LIQKIMTQLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKDKFPKVPIMALTATAN 609
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------------EKVAERL--QVGLSYG 606
V+ D++ L + N ++ +QSFNR NL+ + + + R + G+ Y
Sbjct: 610 EKVRMDILHNLKMDNPVLLKQSFNRTNLFYEIKWKSGNYLLEIKDYILSRFKGKTGIIYC 669
Query: 607 HFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKP 665
H E + L E G K +FYH + R +QK+W + +I +ICAT+AFGMGI+KP
Sbjct: 670 HSKQSCEQTSMKLNEYGLKTSFYHAGMSADSRFNIQKRWQESKIQVICATIAFGMGIDKP 729
Query: 666 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFT 725
DVRFVIH LP+++EGY+QE GRAGRDG S CV+YYSY D ++ +I +
Sbjct: 730 DVRFVIHLFLPRTLEGYYQETGRAGRDGNYSECVMYYSYKDARSLQSLIQRDE------- 782
Query: 726 PGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC 785
++ G+ E + L ++V YCEN DCRR L +F E FD +CKK CDNC
Sbjct: 783 ------ELSELGK--ENHLAKLRQVVQYCENTTDCRRKQVLQYFNETFDPVNCKKQCDNC 834
Query: 786 SKIK--SFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
+ +EKD T AK +++LVK + Q + H +VFRG ++ + + H H
Sbjct: 835 RNYNHVTVVEKDCTQYAKDIIKLVKSIQDDQVTVLHCQDVFRGLNHKKITEAGHNENEYH 894
Query: 843 GAGKHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
G G+ L K++ RI +L+ E ++E V + G S+ +KV ++ A ++ G++ +V
Sbjct: 895 GKGQSLDKNDVERIFFYLLSEQCIVEYHVMHA---GFASNYVKVGKN-ADVVLNGQKKIV 950
Query: 902 LRFPS--AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRM 959
+ F S S L ++ ++ + +R T + + D + + + LR
Sbjct: 951 ISFSSRPVSASNSLGRTPANTSRPAEYQESFITARQMTTA---DVPDSSFTQRCLQELRE 1007
Query: 960 LRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
R E + + I G TL+ +S ++P +++ ++ GI K ++ +Y + +
Sbjct: 1008 AREGASTEC--AISSSQIVGEVTLRDMSAKLPTNKKDFAKLEGIKKGQL-EYFTYFKKIL 1064
Query: 1020 ESTIKEFYKTDKNGSSSNDSND 1041
S +E K S+S ++D
Sbjct: 1065 TSLSREKKKMSNTSSTSTVASD 1086
>gi|401827051|ref|XP_003887618.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
gi|392998624|gb|AFM98637.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
Length = 766
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/500 (43%), Positives = 309/500 (61%), Gaps = 34/500 (6%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VF FR NQRE+I A +SG DVFVLMPTGGGKS+ YQLPAL+ GIT+V+SPL+SL
Sbjct: 230 REVFKMKEFRMNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYEGITIVVSPLLSL 289
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQI +LL+ +I A ++ N+ TE+ + L S+ K+ YVTPE +AKS
Sbjct: 290 VQDQIRNLLEKDILALPINSNLSRTERSLVFEVLGSEELICKIFYVTPELIAKSGHFHDV 349
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ L R L R VIDEAHCVSQWGHDFRPDY+ LG ++ ++P+ P++ALTATAT V+
Sbjct: 350 VSGLVRRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSIRARYPSVPIIALTATATKKVEL 409
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQ---VGLSYGHF---------FLLKE 613
D+++ LG+ C F+ SFNR NL + ++ V HF KE
Sbjct: 410 DILENLGIRGCETFKMSFNRSNLRYEVRAKTSTVELDIVSFVQTHFPDCCGIIYCTSKKE 469
Query: 614 FYVVS--LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
++S L+ K AFYH + +R VQ++W+K E +I AT+AFGMGI+K DVRFVI
Sbjct: 470 CEMISDRLKKYMKTAFYHAGLSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVI 529
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ +PKS+EGY+QE GRAGRDG S CVL+Y+Y D ++ MI +G G+ +
Sbjct: 530 HYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKG-------DGGYEQ- 581
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ E+L ++ +CEN DCRR+ L HFGEKFD CKKTCDNC + ++
Sbjct: 582 --------KQRQREDLEAVIQFCENKTDCRRMQVLAHFGEKFDPQMCKKTCDNCRR-EAI 632
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++KD + A+ L+ LV T + + ++V++G N+ K + +G GK+L K+
Sbjct: 633 VKKDYSKEARDLILLV-YTSNRITLCQAVDVYKGLSNK--KSREYSESEYYGKGKYLKKT 689
Query: 852 EASRILRHLVIEDFLMEEVK 871
RILR L+ + ++ E+++
Sbjct: 690 AIERILRSLISQGYIQEKIE 709
>gi|348680141|gb|EGZ19957.1| hypothetical protein PHYSODRAFT_312852 [Phytophthora sojae]
Length = 1112
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/530 (41%), Positives = 314/530 (59%), Gaps = 49/530 (9%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG+++FRPNQ + S DVFVLMPTGGGKSL YQLPA I G+T+V+SPLVSL
Sbjct: 301 RDVFGHNAFRPNQERTVMEAFSRRDVFVLMPTGGGKSLCYQLPACIDDGVTIVVSPLVSL 360
Query: 446 IQDQIMHLLQANIPATFLSGNMEW-TEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLR 504
IQDQ+ L ++ L+G+ ++ T Q+ I+ EL S+ + K+LYVTPEK+A S +L
Sbjct: 361 IQDQVQQLEALDVGVANLNGDQDYDTVQKPIISELFSNRIRIKMLYVTPEKIASSGMLNN 420
Query: 505 QLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
ESL R LLAR VIDEAHC+SQWGHDFR DY LG L+ KFP+ P++ALTATA +
Sbjct: 421 LFESLEKRGLLARFVIDEAHCISQWGHDFRKDYMTLGSLRSKFPSVPIMALTATANTQTE 480
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLS---------YGHFFLL---- 611
D+V+ L L N I R SFNRPNL D K + ++ G + L
Sbjct: 481 ADIVKNLKLKNPFITRSSFNRPNLTYDVRKKTSKFMTEIADYVRKHIDDSGIIYCLSKKD 540
Query: 612 ------KEFYVVSLECGHKA---AFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
K + E KA +FYH ++P RA+ +WSK +I +ICATVAFGMGI
Sbjct: 541 CEQTADKLIKALGFEHTRKASQISFYHAGLEPEDRAYRHHEWSKGKIKLICATVAFGMGI 600
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
NKPDVR+VIHH++P+S+ Y+QE GRAGRDG+ ++C+LYYS+ D R + +I++
Sbjct: 601 NKPDVRYVIHHTIPQSVTHYYQEAGRAGRDGEVANCILYYSFLDLTRRRKLITK------ 654
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
+R N+ + + +NL RM +CEN V+CRR L +FGE F S C+ TC
Sbjct: 655 ------DRDNMQHRN----VHLQNLRRMTEFCENQVECRRTSLLEYFGEHFSSDQCRGTC 704
Query: 783 DNCSKIK---SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV-----KKH 834
DNC +F + DVT+ L ++K + + ++++ + L Q + K+
Sbjct: 705 DNCKNKALGITFEKSDVTEDCVALAGMIKSLQESGDPATLVQISQIFLGQTIKGREWKQD 764
Query: 835 RHETLSLHGAGK-HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVL 883
+ L+ G GK ++SE RIL H+V+ + EV +++ G ++ L
Sbjct: 765 QFAQLAGFGKGKGRYSRSEVERILYHMVLRQY-TREVDQTNAKGFTTTFL 813
Score = 47.8 bits (112), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 918 VTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHI 977
V P + + L P R + P++ V+ L L+ R + +M YHI
Sbjct: 900 VVPPPSTTTAYPLIPERTSSRRIPEDHVE-----ALAQLLKDWRASVCD--SHNLMPYHI 952
Query: 978 FGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSN 1037
+ + ++ VP + ELLEI+G+G+ +V KYG ++ +++ + + T K S+
Sbjct: 953 LPTSGIAAIANAVPVSNAELLEIDGLGRTRVKKYGEPIIAIVQTYLDKHNLTPKPLPSAR 1012
Query: 1038 DSN 1040
+N
Sbjct: 1013 STN 1015
>gi|365990115|ref|XP_003671887.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
gi|343770661|emb|CCD26644.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
Length = 1434
Score = 411 bits (1057), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/562 (38%), Positives = 336/562 (59%), Gaps = 43/562 (7%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI-- 431
+FPW+ +++ +++F FRPNQ E ++AT+SG DVF+LMPTGGGKSL YQLPA+I
Sbjct: 649 NFPWSNEVKLKLRQIFKLPGFRPNQEEAVSATLSGKDVFILMPTGGGKSLCYQLPAVIKS 708
Query: 432 --CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY-KL 488
G T+VISPL+SL+QDQ+ HLL NI A+ S E++++ N C +
Sbjct: 709 GKTKGTTIVISPLISLMQDQVQHLLDKNIKASMFSSRGTVEEKRQVF---NLFICGLLDV 765
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
+Y++PE ++ S+ R ++ L++ LAR+V+DEAHCVS WGHDFRPDY+ L K+++P
Sbjct: 766 VYISPEMISASEQCKRAIKRLHSDGKLARVVVDEAHCVSNWGHDFRPDYKELKYFKREYP 825
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK--------VAE--- 597
+ P++ALTATA+ V+ D++ L L + + +QSFNR NL+ + K +A+
Sbjct: 826 DVPMMALTATASEQVRMDIIHNLELKDPVFLKQSFNRTNLYYEVRKKNKNTIFEIADMIK 885
Query: 598 ---RLQVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
R Q G+ Y H E ++ G K+A+YH ++P R +QK W DEI +IC
Sbjct: 886 SKFRNQTGIIYCHSKNSCEQTSNQMQRAGIKSAYYHAGMEPDDRLKIQKAWQADEIQVIC 945
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
ATVAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG+ S C+ Y+ + D ++ M
Sbjct: 946 ATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGKYSYCITYFCFRDVRTMQTM 1005
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I + N+ + E + L ++++YC+N DCRR L L +F E F
Sbjct: 1006 IQKDE-------------NLDRENK--EKHLNKLQQVMAYCDNATDCRRKLVLSYFNEDF 1050
Query: 774 DSAHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQY 830
DS C K CDNC + E+D+TD AK++V +V K+ + + + ++F+GS +
Sbjct: 1051 DSKLCHKNCDNCKNSSHAMTEERDITDIAKQIVTMVEKIQNDKVTLINCQDIFKGSRSSK 1110
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
+ + + L HG G+ ++KS+ RI HL I L++E + G ++ +KV S
Sbjct: 1111 IVQSGYSNLQQHGQGRKMSKSDIERIFFHL-ITIRLLQEYSVMNKGGFATTYVKVGPS-V 1168
Query: 891 HNLIIGRQNVVLRFPSAINSTK 912
L G V ++F S+ +T+
Sbjct: 1169 SKLRDGSLKVTMQFTSSTPATR 1190
>gi|225563190|gb|EEH11469.1| RecQ family helicase MusN [Ajellomyces capsulatus G186AR]
Length = 1559
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/520 (42%), Positives = 313/520 (60%), Gaps = 44/520 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+K ++ F + FRPNQ E INAT+SG D FVLMPTGGGKSL YQLP++I
Sbjct: 669 PWSKDVKHALLHRFQLNGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVIQSGT 728
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+VISPL+SL++DQ+ HL + +I A L+G++ ++EI L + ++ +LL
Sbjct: 729 TKGVTVVISPLLSLMEDQVAHLKRLHIQAFLLNGDVSREGKKEIYGALRNARVEHLIQLL 788
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V K+ LL L L++R LARIVIDEAHCVSQWGHDFRPDY+ LG + +FP
Sbjct: 789 YVTPEMVNKNGALLDILSHLHSRRKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTRFPG 848
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK----------VAERL 599
P++ALTATAT +VK DV+ LG+ + +F QSFNRPNL + + +AE +
Sbjct: 849 IPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKGTNVVDGIAETI 908
Query: 600 ------QVGLSYGHFFLLKEFYVVSLECGHK--AAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E L HK AA YH + R +Q W + ++
Sbjct: 909 KTSYNGQAGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQSGKCSV 968
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LYY + D ++
Sbjct: 969 IVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDTATIR 1028
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVHFG 770
+MI +G G N ++ +LR +V +CEN DCRR+ L +F
Sbjct: 1029 NMIDKGE--------GSNE---------QKSRQRQMLRHVVQFCENRSDCRRVQILAYFN 1071
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQ 829
EKF +C ++CDNC +F ++D TD A V+LV +L ++ ++ + +++FRG+ +
Sbjct: 1072 EKFKKENCNRSCDNCKAGLTFEDRDFTDLAASAVKLVGRLADRKVTTLYCVDLFRGATRK 1131
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + G G L + + R+ HL+ E+ L EE
Sbjct: 1132 FSDPA-DKCFPEFGIGADLDRGDVQRLFSHLLCEEVLREE 1170
>gi|396081744|gb|AFN83359.1| ATP-dependent DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 765
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/500 (43%), Positives = 305/500 (61%), Gaps = 34/500 (6%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VF FR NQRE+I A +SG DVFVLMPTGGGKS+ YQLPAL+ GIT+V+SPL+SL
Sbjct: 229 REVFKMKEFRMNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYEGITIVVSPLLSL 288
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQI +LLQ +I A ++ N+ E+ + L SD K+ YVTPE +AKS
Sbjct: 289 VQDQIRNLLQKDILALPINSNLSRNERSLVFEALRSDELICKIFYVTPELIAKSGHFHDV 348
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ L R L R VIDEAHCVSQWGHDFRPDY+ LG ++ ++P+ P++ALTATAT V+
Sbjct: 349 VSELVRRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSIRIRYPSVPIIALTATATKKVEL 408
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQ---VGLSYGHF---------FLLKE 613
D+++ LG+ C F+ SFNR NL + ++ V HF KE
Sbjct: 409 DILENLGIRGCETFKMSFNRSNLRYEVRAKTSTVELDIVSFVQTHFPDCCGIIYCTSKKE 468
Query: 614 FYVVS--LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
++S L+ K AFYH + +R VQ++W+K E +I AT+AFGMGI+K DVRFVI
Sbjct: 469 CEMISDKLKKYMKTAFYHAGLSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVI 528
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ +PKS+EGY+QE GRAGRDG S CVL+Y+Y D ++ MI +G G+ +
Sbjct: 529 HYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKG-------DGGYEQ- 580
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ E+L ++ +CEN DCRR+ L HFGEKFD C+KTCDNC + ++
Sbjct: 581 --------KQRQREDLEAVIQFCENKTDCRRMQVLGHFGEKFDPQMCRKTCDNCRR-EAM 631
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++KD T A+ L+ LV T + + ++V++G N+ K + +G GK L K+
Sbjct: 632 VKKDYTKEARDLILLV-YTSNRITLCQAVDVYKGLSNK--KSREYSESEYYGKGKSLKKT 688
Query: 852 EASRILRHLVIEDFLMEEVK 871
RILR L+ + + E ++
Sbjct: 689 TIERILRSLISQGCIQERIE 708
>gi|325093139|gb|EGC46449.1| RecQ family helicase MusN [Ajellomyces capsulatus H88]
Length = 1559
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/520 (42%), Positives = 313/520 (60%), Gaps = 44/520 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+K ++ F + FRPNQ E INAT+SG D FVLMPTGGGKSL YQLP++I
Sbjct: 669 PWSKDVKHALLHRFQLNGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVIQSGT 728
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+VISPL+SL++DQ+ HL + +I A L+G++ ++EI L + ++ +LL
Sbjct: 729 TKGVTVVISPLLSLMEDQVAHLKRLHIQAFLLNGDVSREGKKEIYGALRNARVEHLIQLL 788
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V K+ LL L L++R LARIVIDEAHCVSQWGHDFRPDY+ LG + +FP
Sbjct: 789 YVTPEMVNKNGALLDILSHLHSRHKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTRFPG 848
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK----------VAERL 599
P++ALTATAT +VK DV+ LG+ + +F QSFNRPNL + + +AE +
Sbjct: 849 IPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKGTNVVDGIAETI 908
Query: 600 ------QVGLSYGHFFLLKEFYVVSLECGHK--AAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E L HK AA YH + R +Q W + ++
Sbjct: 909 KTSYNGQAGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQSGKCSV 968
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LYY + D ++
Sbjct: 969 IVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDTATIR 1028
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVHFG 770
+MI +G G N ++ +LR +V +CEN DCRR+ L +F
Sbjct: 1029 NMIDKG--------EGSNE---------QKSRQRQMLRHVVQFCENRSDCRRVQILAYFN 1071
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQ 829
EKF +C ++CDNC +F ++D TD A V+LV +L ++ ++ + +++FRG+ +
Sbjct: 1072 EKFKKENCNRSCDNCKAGLTFEDRDFTDLAASAVKLVGRLADRKVTTLYCVDLFRGATRK 1131
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + G G L + + R+ HL+ E+ L EE
Sbjct: 1132 FSDPA-DKCFPEFGIGADLDRGDVQRLFSHLLCEEVLREE 1170
>gi|240275770|gb|EER39283.1| RecQ family helicase MusN [Ajellomyces capsulatus H143]
Length = 1559
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/520 (42%), Positives = 313/520 (60%), Gaps = 44/520 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+K ++ F + FRPNQ E INAT+SG D FVLMPTGGGKSL YQLP++I
Sbjct: 669 PWSKDVKHALLHRFQLNGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVIQSGT 728
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+VISPL+SL++DQ+ HL + +I A L+G++ ++EI L + ++ +LL
Sbjct: 729 TKGVTVVISPLLSLMEDQVAHLKRLHIQAFLLNGDVSREGKKEIYGALRNARVEHLIQLL 788
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V K+ LL L L++R LARIVIDEAHCVSQWGHDFRPDY+ LG + +FP
Sbjct: 789 YVTPEMVNKNGALLDILSHLHSRHKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTRFPG 848
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK----------VAERL 599
P++ALTATAT +VK DV+ LG+ + +F QSFNRPNL + + +AE +
Sbjct: 849 IPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKGTNVVDGIAETI 908
Query: 600 ------QVGLSYGHFFLLKEFYVVSLECGHK--AAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E L HK AA YH + R +Q W + ++
Sbjct: 909 KTSYNGQAGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQSGKCSV 968
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LYY + D ++
Sbjct: 969 IVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDTATIR 1028
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVHFG 770
+MI +G G N ++ +LR +V +CEN DCRR+ L +F
Sbjct: 1029 NMIDKG--------EGSNE---------QKSRQRQMLRHVVQFCENRSDCRRVQILAYFN 1071
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQ 829
EKF +C ++CDNC +F ++D TD A V+LV +L ++ ++ + +++FRG+ +
Sbjct: 1072 EKFKKENCNRSCDNCKAGLTFEDRDFTDLAASAVKLVGRLADRKVTTLYCVDLFRGATRK 1131
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + G G L + + R+ HL+ E+ L EE
Sbjct: 1132 FSDPA-DKCFPEFGIGADLDRGDVQRLFSHLLCEEVLREE 1170
>gi|290991859|ref|XP_002678552.1| predicted protein [Naegleria gruberi]
gi|284092165|gb|EFC45808.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 270/432 (62%), Gaps = 41/432 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
F W+ L + K VFG SFR Q E INAT+SG DVF++MPTGGGKSL YQLPA+I
Sbjct: 3 FEWSSVLRSTLKDVFGIPSFRTLQLEAINATLSGRDVFIIMPTGGGKSLCYQLPAIIDVG 62
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G+T+VISPL+SLIQDQ+M L+ +IPA FL+ + ++I REL S ++LLY
Sbjct: 63 SSGGVTIVISPLLSLIQDQVMSLINLDIPAVFLTSEQDSETTKDIYRELGSRNPSFRLLY 122
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
VTPEK+++S+ L L L+ R L R+V+DEAHCVS WGHDFRPDY+ LGI K +FP+
Sbjct: 123 VTPEKISRSETFLNILRRLHERGLFKRVVVDEAHCVSNWGHDFRPDYRKLGIFKDEFPDV 182
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFL 610
P++ALTATAT V+ED++ L + NC+ + SFNR NL+ + K + F
Sbjct: 183 PLIALTATATGIVQEDIIHQLKIKNCVSLKGSFNRTNLYYEVRKKQTLEKTAKEISEFIN 242
Query: 611 LKE------FYVVS-LEC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
K Y +S +C GH Y+ I A + V ++WS+DE+ II
Sbjct: 243 KKYPNQSGIIYCLSKKDCEKMAEELTTLGHDVGVYNSDIKAADKQEVHEKWSRDELKIIV 302
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGINKPDVRFVIHHSLPKSIE Y+QE GRAGRDG S C+L+YSY+D
Sbjct: 303 ATIAFGMGINKPDVRFVIHHSLPKSIEDYYQESGRAGRDGLPSHCILFYSYAD------- 355
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
A Q F N ++ EN+ ++VSYCEND +CRR++QL HFGE F
Sbjct: 356 ----KARQQKFLENEN---------TNKSGYENINKIVSYCENDCECRRVVQLRHFGESF 402
Query: 774 DSAHCKKTCDNC 785
D C K CDNC
Sbjct: 403 DPKVCSKMCDNC 414
>gi|328770877|gb|EGF80918.1| hypothetical protein BATDEDRAFT_10941 [Batrachochytrium
dendrobatidis JAM81]
Length = 573
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/520 (41%), Positives = 308/520 (59%), Gaps = 48/520 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
FPWTK++ ++VF FR NQ E INAT++ D F+LMPTGGGKSL YQLPA G
Sbjct: 26 FPWTKQVFKVLQEVFHLTDFRQNQLESINATLNSIDCFILMPTGGGKSLCYQLPACCTTG 85
Query: 435 ----ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
+T+VISPL+SLIQDQ+ L+Q NI A +S +M +++ EL + K++Y
Sbjct: 86 KTTGLTVVISPLLSLIQDQVSRLVQLNILAIAISSDMSAEDKRWAYDELRKEPLPPKMIY 145
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
VTPE V +S L L R LAR V+DEAHCVSQWGHDFRPDY+ L L+ ++P
Sbjct: 146 VTPELVMRSGQFKTALNDLFRRGRLARFVVDEAHCVSQWGHDFRPDYKELSTLRVQYPTV 205
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFL 610
P++ALTATA VK D+++ L + C F+QSFNR NL D K + L ++
Sbjct: 206 PIIALTATANDKVKMDIIKVLNIPQCAKFQQSFNRSNLRYDVRKKDKGLDADITA----F 261
Query: 611 LKEFYVVS---LEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+K FY + + C G KAAFYH +D R+ +Q W+ + ++I
Sbjct: 262 IKTFYPNASGIIYCSSRKACEATSAKLCKLGIKAAFYHAGLDKEDRSRIQTAWATNSVHI 321
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+K DVRFVIH+S+P+S+EGY+QE GRAGRDG+ S C+LYY+Y D +
Sbjct: 322 IVATIAFGMGIDKGDVRFVIHYSIPQSLEGYYQETGRAGRDGKDSMCILYYAYKDKSTID 381
Query: 712 HMI--SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
+I +G EQ E NL +++SYCEN VDCRR L +F
Sbjct: 382 FLIENGEGNYEQK------------------ERQRNNLRQIISYCENLVDCRRQQVLAYF 423
Query: 770 GEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLN 828
GE+FD + C++TCDNC + KD+T+ K ++++V+ + Q+ + +H +++FRGS
Sbjct: 424 GERFDKSQCRQTCDNCQREGGATVKDITEITKSIIKIVQAIQNQKITINHCVDIFRGSKQ 483
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
+ H+ + +G G+ ++ R+ LV D L+E
Sbjct: 484 AKIMSMMHDQIEGYGVGRMYTRTTVERLFHFLVSRDVLVE 523
>gi|345315332|ref|XP_001515695.2| PREDICTED: Bloom syndrome protein [Ornithorhynchus anatinus]
Length = 865
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 257/690 (37%), Positives = 377/690 (54%), Gaps = 85/690 (12%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ DF +K++ K FG H FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 62 ERFKRIDFAHSKEMMKIFHKKFGLHHFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 121
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA I PG+++VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 122 PACISPGVSIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEAASIYLQLSKKDPIIK 181
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 182 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNVLRQKF 241
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----EKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL D +KVA
Sbjct: 242 PSVPVMALTATANPRVQKDILTQLKILKPQVFSMSFNRHNLKYDVLPKKPKKVAFDCLSW 301
Query: 603 LSYGHFFLLKEFYVVS-LEC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 302 IRKHHPYDSGIIYCLSRRECDTMALTLRKDGLAALAYHAGLSDSARDEVQHKWINQDGCQ 361
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVR+VIH SLPKS+EGY+QE GRAGRDG+ S C+L+YSY D IR+
Sbjct: 362 VICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYSYHDVIRL 421
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I S H R +T+ NL MV YCEN +CRR+ L +FG
Sbjct: 422 KRLILMEKDGNS-----HTR----------QTHFNNLYSMVHYCENIAECRRIQLLSYFG 466
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVK----LTGQ--------- 812
E F+ CK+ CDNC + K + +DVT+ K +V V+ L G+
Sbjct: 467 ENGFNPNFCKEHLDVACDNCCQKKDYKSRDVTEDVKNIVRFVQELDSLQGRRNMRNITSP 526
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + V+ + G G ++ A R+ + LV++ L E++
Sbjct: 527 GRFTMNMLVDIFLGSKSAKVQS------GIFGKGSAYSRHNAERLFKKLVLDKILDEDL- 579
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIG-RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKL 930
+ N ++ G R VL S ++ + + + +L++ K+
Sbjct: 580 ----------FINANDQPIAYIVAGERAQAVLHGYSKVDFIETENASSIRKQKALVA-KV 628
Query: 931 SPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRV 990
S + EV +L + L + GV ++IF TL+ +++ +
Sbjct: 629 S---------EREEVVKKCLGELTEVCKALGKVF------GVHYFNIFNTVTLKKVAESL 673
Query: 991 PRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E LL+I+G+ + K+ KYG ++ ++
Sbjct: 674 SSDPEVLLQIDGVTEDKLEKYGAEVIGVLQ 703
>gi|410075411|ref|XP_003955288.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
gi|372461870|emb|CCF56153.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
Length = 1318
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/580 (39%), Positives = 332/580 (57%), Gaps = 46/580 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW++++E VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 535 YPWSEEVEERLHGVFKLPGFRPNQEEAVNATLDGKDVFVLMPTGGGKSLCYQLPAIVKSG 594
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S E+++ + ++Y
Sbjct: 595 RTRGTTIVISPLISLMQDQVEHLLAKNIKASMFSSKGTSEERRQTFNLF--IHGLLDVVY 652
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S R ++ L LAR+V+DEAHCVS WGHDFRPDY+ L + K ++P
Sbjct: 653 ISPEMISASQQCKRAIDKLYTDGNLARVVVDEAHCVSNWGHDFRPDYKELKMFKVEYPTI 712
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V D++ LGL N + +QSFNR NL+ + C+ + R
Sbjct: 713 PMMALTATASKQVIMDIIHNLGLKNEVFLKQSFNRTNLYYEVKKKDKDTMNNICDMIKNR 772
Query: 599 L--QVGLSYGHFFLLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E L+ + + A+YH ++P +R+ VQK W +DEI +ICAT
Sbjct: 773 FRNQTGIIYCHSKNSCEQVSSQLQRKNIRCAYYHAGMEPEERSAVQKAWQEDEIQVICAT 832
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFVIH+++P+++EGY+QE GRAGRDG S CV Y+ + D ++ MI
Sbjct: 833 VAFGMGIDKPDVRFVIHYTVPRTLEGYYQETGRAGRDGNYSYCVTYFHFKDIRTMQTMIQ 892
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ + N + L L +++YC+N DCRR L L +F E F+
Sbjct: 893 KD-----------QNLDRENKQKHL----NKLQEVMAYCDNITDCRRKLVLSYFNEDFNP 937
Query: 776 AHCKKTCDNCSKIKSFI---EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYV 831
A C K CDNC K +S I ++DVT AK + LV+ + + + H ++F+GS N +
Sbjct: 938 ALCAKNCDNC-KNRSNITLEKRDVTGLAKDIARLVEAIQHDRVTLIHCQDIFKGSRNSKI 996
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAH 891
H+TL HG GK + KS+ RI HLV L EE + + G ++ +K S
Sbjct: 997 MSAHHDTLPQHGQGKGMPKSDVERIFFHLVTMRIL-EEYQIMNNRGFATTYVKPGPS-FR 1054
Query: 892 NLIIGRQNVVLRF---PSAINSTKLSKSDVTPAKGSLLSG 928
NL+ + V ++F P S+ S + P S ++
Sbjct: 1055 NLVSNKLKVEMQFNVTPGNSRSSTASGTQPAPRAASRMAS 1094
>gi|254567515|ref|XP_002490868.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|238030664|emb|CAY68588.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|328351249|emb|CCA37649.1| bloom syndrome protein [Komagataella pastoris CBS 7435]
Length = 1302
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/576 (39%), Positives = 335/576 (58%), Gaps = 42/576 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PWT ++ ++ F SFR NQ E +NAT+SG DVFVLMPTGGGKSL YQLPAL+
Sbjct: 525 YPWTDEVFYILRETFKLESFRSNQLEAVNATLSGEDVFVLMPTGGGKSLCYQLPALVQSG 584
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+V+SPL+SL+QDQ+ HL+ I A ++ E++++ LNS L+Y
Sbjct: 585 STRGTTVVVSPLISLMQDQVEHLIANKIKAGMINSKGTVQERRQMFDLLNSG--DLDLIY 642
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ L+ L+ LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 643 LSPEMISASNQARSSLKRLHRIGKLARIVVDEAHCVSSWGHDFRPDYKTLNYFKKEYPDI 702
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE------------- 597
PV+ALTATA V D+V LGL F+QSFNR NL+ + +
Sbjct: 703 PVMALTATANEHVVMDIVHNLGLNKPQCFKQSFNRTNLFYKVQVKTKTHLDEITNMINGQ 762
Query: 598 -RLQVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
R Q G+ Y H E L + G K +FYH + R VQ W D+I +ICAT
Sbjct: 763 YRNQTGIIYCHSKNSCEQTSARLIQNGIKCSFYHAGMTTEDRFAVQSAWQSDKIRVICAT 822
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGI+KPDVRFVIH ++P+++EGY+QE GRAGRDG S C+++YSY D ++ MI
Sbjct: 823 IAFGMGIDKPDVRFVIHLTVPRTLEGYYQETGRAGRDGNHSDCIMFYSYRDVRTLQTMIQ 882
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ V ++ + E + L +++ YCEN DCRR L +F E FD
Sbjct: 883 KDV-------------DLTRENK--ENHLNKLRKVIQYCENGTDCRRQQVLQYFNENFDK 927
Query: 776 AHCKKTCDNCSK--IKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C+K CDNC K + E+DVT+ A+ +V LVK L ++ + + ++FRGS + V
Sbjct: 928 KDCQKQCDNCVKGNDSTTEERDVTNFARDMVNLVKSLQDEKITLLYCQDLFRGSKSNKVM 987
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
H++ +G G+++ K + RI HL+ E LM E + G + +K+ + A++
Sbjct: 988 SSGHDSNPYYGKGRNINKGDVERIFFHLIYEQILM-EYSVMNGAGFACNYIKLGK-HANS 1045
Query: 893 LIIGRQNVVLRFPSAINSTKL-SKSDVTPAKGSLLS 927
++ G + +V+ F +AI+ TK +K PA + L+
Sbjct: 1046 VLCGTRKIVVAFSTAIDRTKAPNKPTSKPASKAKLT 1081
>gi|242013217|ref|XP_002427311.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
gi|212511652|gb|EEB14573.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
Length = 1152
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 257/675 (38%), Positives = 366/675 (54%), Gaps = 85/675 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG SFR NQ +++NA + GHD FVLMPTGGGKSL YQLPA++ G+T+VISPL SLI D
Sbjct: 403 FGLKSFRTNQLQVMNAALLGHDCFVLMPTGGGKSLCYQLPAIVSQGVTVVISPLRSLILD 462
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L+ +I A LSG+++ +E +I R+LN + KLLYVTPEKV S L
Sbjct: 463 QVTKLVTLDIKACHLSGDVKESEVVDIYRKLNMPEPEIKLLYVTPEKVGASTSLRNIFSR 522
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L R +LAR VIDEAHCVSQWGHDFRPDY+ L L++ +PN ++ALTATAT V+ D++
Sbjct: 523 LYNRNMLARFVIDEAHCVSQWGHDFRPDYKKLRELRENYPNVNIMALTATATPRVRIDIL 582
Query: 569 QALGLVNCIIFRQSFNRPNLWMDCEKVAERL-QVGLSYGHFFLLKEF-------YVVSL- 619
L + + F SFNR NL C V E+ + L + +EF Y S
Sbjct: 583 HQLKVKSPKWFLSSFNRSNL---CYAVKEKKGKSTLKDIAALIQQEFSRDTGIIYCFSRK 639
Query: 620 EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
EC G A YH ++ +R Q W ++ ++CAT+AFGMGI+K DVR+
Sbjct: 640 ECEDVARDLKVHGIGAIPYHAGLNDTERTKAQNLWMNGKVKVVCATIAFGMGIDKLDVRY 699
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
V H+SLPKSIEGY+QE GRAGRDG++++C+LYYSY D R+ +I+ +QS
Sbjct: 700 VFHYSLPKSIEGYYQESGRAGRDGEKATCILYYSYRDKHRMLKLINM---DQSMSNMAAK 756
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC----KKTCDNC 785
+ ++ +NL R+V++ EN DCRR LQL +FGEKFD C + CDNC
Sbjct: 757 KVHI-----------DNLYRVVAFAENVTDCRRSLQLNYFGEKFDRKVCIENRETACDNC 805
Query: 786 SKIKSFIEK-DVTDTAKKLVELVK-LTG------QQFSSSHILEVFRGSLNQYVKKHRHE 837
+ K F E DVT +K +V +K + G ++ H +++F+G+ + V+ H+
Sbjct: 806 LQ-KGFYETVDVTAESKAIVSAIKEVCGPDHQKHSNYTMLHFVDIFKGTGMKKVESEGHQ 864
Query: 838 TLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGR 897
L L G GK + +A R++R L++E+FL E + D G + LK + + L+ G
Sbjct: 865 NLPLCGMGKSWQRLDAERLIRKLIMEEFLKERIMVKD-EGMTCAYLKCGR-RGDELLKGN 922
Query: 898 QNVVLRFPSAINST------KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSA 951
++ + ST K +K+ V PA L +
Sbjct: 923 VKIMFDIKKSKKSTPGASTSKTTKTSVDPAI------------------------LEIQE 958
Query: 952 KLYSSLR-MLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
K Y+ L ++R + + I L+ +S +P T EE+ IN + A K
Sbjct: 959 KCYTELMDVIRGI---ASSLNCNPNAIMNVQALRSMSYNLPETPEEMFLINHVTTANFEK 1015
Query: 1011 YGVRLLETIESTIKE 1025
YG LLE + +E
Sbjct: 1016 YGNILLEITKKYAEE 1030
>gi|119193364|ref|XP_001247288.1| hypothetical protein CIMG_01059 [Coccidioides immitis RS]
gi|392863466|gb|EAS35781.2| RecQ family ATP-dependent DNA helicase [Coccidioides immitis RS]
Length = 1569
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 261/773 (33%), Positives = 394/773 (50%), Gaps = 114/773 (14%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI-- 431
++PW+ ++A + +F FRPNQ E INAT+SG D FVLMPTGGGKSL YQLP+++
Sbjct: 690 NYPWSADVKAALRDIFNLRGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVVQS 749
Query: 432 --CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYK 487
G+T+VISPL+SL+ DQ+ L ++ A F++G+++ E+++IL L + +
Sbjct: 750 GRTRGVTVVISPLLSLMDDQVGQLRSLSVKAHFINGSLKAAERRQILEYLQDPRVEDQIQ 809
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPE V KS +L L L+ R+ AR+VIDEAHCVSQWGHDFRPDY+ LG ++ F
Sbjct: 810 LLYVTPEMVNKSQAMLDTLRQLHRRKKFARLVIDEAHCVSQWGHDFRPDYKELGDFRRHF 869
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERLQV 601
P P++ALTATAT +VK DV+ LG+ C F QSFNRPNL + E V E +
Sbjct: 870 PGVPLMALTATATQNVKVDVIHNLGMDGCEKFTQSFNRPNLTYEVRVKGNHEDVLENIAK 929
Query: 602 GLSYGHFFLLKEFYVVSLE---------CGH---KAAFYHGSIDPAQRAFVQKQWSKDEI 649
+ + H+ Y +S + C KA YH + P R VQ++W +
Sbjct: 930 IIDF-HYGKTGIIYCLSRKNCEKVAKDLCTKYHVKATHYHAGMAPDDRIRVQREWQDGKH 988
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
N+I AT+AFGMGI+KPDVRFVIHH++PKS+EGY+QE GRAGRDG+RS C L+Y Y D +
Sbjct: 989 NVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGKRSECFLFYGYRDVVA 1048
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
++ +I + N + + + L +V +C+N DCRR+ L +F
Sbjct: 1049 IRKIID-------------DEKNGRKDRQQKDRQHQMLQHVVQFCQNKSDCRRVQILAYF 1095
Query: 770 GEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLN 828
E F +C +TCDNC D T A ++LV +L + + + ++VFRG
Sbjct: 1096 SENFKRENCMRTCDNCQSGSKHEILDFTRYATAALKLVSRLQNDRVTLLYCIDVFRGINP 1155
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS 888
+ + H + +G G L +++ R+ LV E L+E + + +++
Sbjct: 1156 KRFWREEHTRIEEYGMGADLDRNDVERLFGKLVAEGALVE--RNIPNHKNMTEQFVELGP 1213
Query: 889 KAHNLIIGRQNVVLRFPSAINSTKLSK-----------SDVT---------PAKGSLLSG 928
+A + GRQ L + NS KL+K S+VT P ++ S
Sbjct: 1214 RAADFRSGRQKFTLAVRVSPNSKKLTKPLSKSQKRNLGSNVTGVRAVMDELPQSTNVSSP 1273
Query: 929 KLSPSRNDTPSQ----------PQNEVDLNLSAKLYSSLRMLRT---------------- 962
S SR Q +NE D + + R+LR+
Sbjct: 1274 IQSVSRRRARKQCANSFEDDLEEENESDSDGFEPIRQGGRLLRSRVRDVGPRITDDGSRH 1333
Query: 963 --------------LLVKEAGEGVMAY-----HIFGNATLQHLSKRVPRTEEELLEINGI 1003
L+ K+ + +M F + L+ + R P+ + +LL I I
Sbjct: 1334 GLTHLQTMILDEFLLMAKKECQAIMLKKNLRSQPFPDRVLREMGIRFPKNKSQLLRIPDI 1393
Query: 1004 GKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNAN 1056
KV YG + L+ ++ + + + D+ + + D++D R+E P+ N
Sbjct: 1394 DPEKVDLYGDKFLKLVDMSKQRY---DEFTADAVDNHD-----REELPVPDPN 1438
>gi|242764771|ref|XP_002340840.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
gi|218724036|gb|EED23453.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
Length = 1574
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/522 (41%), Positives = 305/522 (58%), Gaps = 46/522 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
F W+K + + F FRPNQ E INAT+ G D FVLMPTGGGKSL YQLP++I
Sbjct: 686 FAWSKDVRTVMRDRFHLKGFRPNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPSVIHSG 745
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYKL 488
G+T+V+SPL+SL++DQ+ HL + I A F++G++ ++ ++ L+S + + +L
Sbjct: 746 RTKGVTIVVSPLLSLMEDQVDHLQKLGIKAFFINGDVTPEHKRWVMSALSSPFADRELEL 805
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V K+ L L++L+A LAR+VIDEAHCVSQWGHDFRPDY+ LG + +FP
Sbjct: 806 LYVTPEMVNKNLTLRDILKTLHANRKLARLVIDEAHCVSQWGHDFRPDYKELGSFRSEFP 865
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAE 597
PV+ALTATAT +VK DV+ L + C + QSFNRPNL D ++A+
Sbjct: 866 GIPVMALTATATENVKIDVINNLRMKGCEVLSQSFNRPNLTYDVLPKKGSAPDIISQIAD 925
Query: 598 RLQVGL--SYGHFFLLK----EFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEI 649
+Q G + L E L G+ KA YH + A+R VQ+ W +
Sbjct: 926 IIQTSYKRKAGIVYCLSRKDCEKVAQELSKGYKIKATHYHAGMASAERTAVQRDWQSGKY 985
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
++I AT+AFGMGI+KPDVRFVIHH++PKS+EGY+QE GRAGRDG+RS C L+YSY D
Sbjct: 986 DVIVATIAFGMGIDKPDVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLFYSYRDTAA 1045
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
K I Q + + N R + L +V +CEN DCRR+ L +F
Sbjct: 1046 QKRFIEQSDGD----------WQQKNRQRQM------LRHVVQFCENQSDCRRVQILAYF 1089
Query: 770 GEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL---TGQQFSSSHILEVFRGS 826
E F + C +TCDNC ++F D +D AK+ ++LV+L + + H +++F G+
Sbjct: 1090 NESFRAGDCHRTCDNCKTDETFQTVDFSDLAKQAIQLVRLFNDRDEDVTILHCIDIFAGT 1149
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
+ K H L +G G + + R+ LV ED L E
Sbjct: 1150 FKRM--KGDHAQLPQYGVGHDIELGDVERLFFKLVGEDILEE 1189
>gi|403173011|ref|XP_003332116.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170091|gb|EFP87697.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1231
Score = 408 bits (1048), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/582 (39%), Positives = 329/582 (56%), Gaps = 49/582 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW++ + K+F H++R NQ + IN T+SG D FVLMPTGGGKSL YQLPA++
Sbjct: 449 PWSRDVGKALVKIFKLHTWRHNQIDAINTTLSGKDCFVLMPTGGGKSLCYQLPAVVRSGV 508
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYV 491
G+T+VISPL+SLI DQ+ L +I A +G+M E++ ++ +L S L+YV
Sbjct: 509 TKGVTIVISPLISLITDQVQALCAKHIGAAAFTGSMTAQERENVMNDLRSVDPALCLVYV 568
Query: 492 TPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLG-ILKQKFPNT 550
TPE + +S VL L L R+LLAR V DEAHCVSQWGHDFRPDY+ +G +L+++F N
Sbjct: 569 TPEMIMRSSVLSNILTDLKNRKLLARFVFDEAHCVSQWGHDFRPDYKDIGPMLRKEFKNI 628
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK--------------VA 596
P +ALTATA V++DV+ L + C + QSFNR NL + V
Sbjct: 629 PFIALTATANHRVQQDVMSNLKITGCRVLTQSFNRINLRYEVRPKTKDVLNDIIQIITVD 688
Query: 597 ERLQVGLSYGHFFLLKEFYVVSLECGHK--AAFYHGSIDPAQRAFVQKQWSKDEINIICA 654
+ + G+ Y E L ++ A YH + R +Q W ++ +ICA
Sbjct: 689 HKGESGIIYCLSKKQCEEVAAHLSAKNRITAHHYHAGMSKDDRQKIQHGWQVGKLQVICA 748
Query: 655 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI 714
T+AFGMGI+KPDVRFVIHHS+P S+EGY+QE GRAGRDGQ S C+L+Y+Y DF M+
Sbjct: 749 TIAFGMGIDKPDVRFVIHHSMPSSLEGYYQETGRAGRDGQISECILFYAYRDFTAFMRMV 808
Query: 715 --SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
S V EQ +E N ++V +C N +DCRR L +FGEK
Sbjct: 809 EKSTTVKEQ------------------IERQQANAKQVVGFCLNKLDCRRAQILSYFGEK 850
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSS----HILEVFRGSLN 828
F ++ C+KTCD C + + KDV+ K +V+LVK S S HI++VFRGS +
Sbjct: 851 FSASECRKTCDTCMNPERVVMKDVSQLMKAVVKLVKQITAHRSESVTIVHIVDVFRGSKS 910
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS 888
+ V H+ L G G L +++ R+L +V +DFL E +++ G V++ +++
Sbjct: 911 KKVTSAGHDQLDGAGQGSTLDRTDCERLLHLMVSKDFLNERF-EANAMGFVNAYVQLG-- 967
Query: 889 KAHN-LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGK 929
AH ++ R V++ F + +K + P K + + K
Sbjct: 968 PAHQEVLTSRGQVMMAFSGEVGPSKRAGPTEAPKKTVVRAKK 1009
>gi|154281633|ref|XP_001541629.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411808|gb|EDN07196.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1557
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/520 (42%), Positives = 312/520 (60%), Gaps = 44/520 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+K ++ F + FRPNQ E INAT+SG D FVLMPTGGGKSL YQLP++I
Sbjct: 669 PWSKDVKHALLHRFQLNGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVIQSGT 728
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+VISPL+SL++DQ+ HL + +I A L+G++ ++ I L + ++ +LL
Sbjct: 729 TKGVTVVISPLLSLMEDQVAHLKRLHIQAFLLNGDVSREGKKVIYGALRNARVEHLIQLL 788
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V K+ LL L L++R LARIVIDEAHCVSQWGHDFRPDY+ LG + +FP
Sbjct: 789 YVTPEMVNKNGALLDILSHLHSRHKLARIVIDEAHCVSQWGHDFRPDYKELGNTRTRFPG 848
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK----------VAERL 599
P++ALTATAT +VK DV+ LG+ + +F QSFNRPNL + + +AE +
Sbjct: 849 IPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKGTNVVDGIAETI 908
Query: 600 ------QVGLSYGHFFLLKEFYVVSLECGHK--AAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E L HK AA YH + R +Q W + ++
Sbjct: 909 KTSYNGQAGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQSGKCSV 968
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LYY + D ++
Sbjct: 969 IVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDTATIR 1028
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVHFG 770
+MI +G G N ++ +LR +V +CEN DCRR+ L +F
Sbjct: 1029 NMIDKGE--------GSNE---------QKSRQRQMLRHVVQFCENRSDCRRVQILAYFN 1071
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQ 829
EKF +C ++CDNC +F ++D TD A V+LV +L ++ ++ + +++FRG+ +
Sbjct: 1072 EKFKKENCNRSCDNCKAGLTFEDRDFTDLAASAVKLVGRLADRKVTTLYCVDLFRGATRK 1131
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + G G L + + R+ HL+ E+ L EE
Sbjct: 1132 FSDPA-DKCFPEFGIGADLDRGDVQRLFSHLLCEEVLREE 1170
>gi|448111284|ref|XP_004201806.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359464795|emb|CCE88500.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1430
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 322/544 (59%), Gaps = 44/544 (8%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG----ITLVISPL 442
++F SFRPNQ E I +T++G DVFVLMPTGGGKSL YQLPALI G T+VISPL
Sbjct: 743 RLFHLKSFRPNQLEAIVSTLNGRDVFVLMPTGGGKSLCYQLPALISSGKTRGTTIVISPL 802
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
+SL+QDQ+ HLL NI A +S E++ L + + + +L+Y++PE V S +
Sbjct: 803 ISLMQDQVQHLLHKNIRAGMISSKGSAAERKSTLEQFRN--GELQLVYLSPEMVNTSQHI 860
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
R + L LAR+V+DEAHCVS WGHDFRPDY+G+ + KQ+FP PV+ALTATA
Sbjct: 861 QRIIARLYESRQLARVVVDEAHCVSSWGHDFRPDYKGMSLFKQQFPQVPVMALTATANEK 920
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERL-------------QVGLSYGHF 608
V+ D+V L + + ++ +QSFNR NL+ + + K A L + G+ Y H
Sbjct: 921 VRMDIVHHLQMSDPVLLKQSFNRTNLFYEIKWKAANFLDWIRDYILTKQQNKTGIIYCHS 980
Query: 609 FLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L + G + ++YH + P +R +Q W ++ I +ICAT+AFGMGI+KPDV
Sbjct: 981 KQSCEVTSDRLNQWGVRCSYYHAGLSPTERFQIQTDWQQNRIQVICATIAFGMGIDKPDV 1040
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH +P+S+EGY+QE GRAGRDG S C+++YSY D +++MI +
Sbjct: 1041 RFVIHLFIPRSLEGYYQETGRAGRDGLPSECIMFYSYKDARSLQNMIQRDS--------- 1091
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-- 785
+ G+ E++ L ++V YCEN DCRR L +F E+FD AHC + CDNC
Sbjct: 1092 ----ELDREGK--ESHLAKLRQVVQYCENTSDCRRKQVLHYFNERFDPAHCARKCDNCLN 1145
Query: 786 SKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
+ + + DVT AK ++ LV+ L G + + H +VFRGS + + + H HG
Sbjct: 1146 NNSANAVIHDVTAYAKDILSLVESLQGDKVTVLHCQDVFRGSNSTKIVRMGHHESPYHGG 1205
Query: 845 GKHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
G+ L K+ R+ +L+ E LME V K G S+ +K+ +A ++ GR+ + +
Sbjct: 1206 GRQLDKTYVERVFFYLLSEGCLMEYHVMKG---GFASNYVKLG-PRARQVLDGRKTIKIP 1261
Query: 904 FPSA 907
F +A
Sbjct: 1262 FAAA 1265
>gi|448097267|ref|XP_004198627.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359380049|emb|CCE82290.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1415
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/541 (41%), Positives = 321/541 (59%), Gaps = 44/541 (8%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG----ITLVISPL 442
+ F SFRPNQ E I +T++G DVFVLMPTGGGKSL YQLPALI G T+VISPL
Sbjct: 734 RTFYLKSFRPNQLEAIVSTLNGRDVFVLMPTGGGKSLCYQLPALISSGKTRGTTIVISPL 793
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
+SL+QDQ+ HLL NI A +S E++ L + + + +L+Y++PE V S +
Sbjct: 794 ISLMQDQVQHLLHKNIRAGMISSKGSAAERKSTLEQFRNG--ELQLVYLSPEMVNTSQHI 851
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
R + L LAR+V+DEAHCVS WGHDFRPDY+G+ + KQ+FP PV+ALTATA
Sbjct: 852 QRIIARLYESRQLARVVVDEAHCVSSWGHDFRPDYKGMSLFKQQFPQVPVIALTATANEK 911
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERL-------------QVGLSYGHF 608
V+ D+V L + + ++ +QSFNR NL+ + + K A L + G+ Y H
Sbjct: 912 VRMDIVHHLQMSDPVLLKQSFNRTNLFYEIKWKAANFLDWIRDYILTKQQNKTGIIYCHS 971
Query: 609 FLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L + G + ++YH + P +R +Q W ++ I +ICAT+AFGMGI+KPDV
Sbjct: 972 KQSCEVTADRLNQWGVRCSYYHAGLSPTERFQIQTDWQQNRIQVICATIAFGMGIDKPDV 1031
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH +P+S+EGY+QE GRAGRDG S C+++YSY D +++MI +
Sbjct: 1032 RFVIHLFIPRSLEGYYQETGRAGRDGLPSECIMFYSYKDARSLQNMIQRDS--------- 1082
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-- 785
+ G+ E++ L ++V YCEN DCRR L +F E+FD AHC + CDNC
Sbjct: 1083 ----ELDREGK--ESHLAKLRQVVQYCENTSDCRRKQVLHYFNERFDPAHCARKCDNCLN 1136
Query: 786 SKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
+ + + DVT AK ++ LV+ L G + + H +VFRGS + + + H+ HG
Sbjct: 1137 NNSANAVIHDVTAYAKDILSLVESLQGDKVTVLHCQDVFRGSNSTKIVRMGHQESPYHGG 1196
Query: 845 GKHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
G+HL K+ R+ +L+ E LME V K G S+ +K+ +A ++ GR+ + +
Sbjct: 1197 GRHLDKTYVERVFFYLLSEGCLMEYHVMKG---GFASNYVKLG-PRAQQVLDGRKTIKIP 1252
Query: 904 F 904
F
Sbjct: 1253 F 1253
>gi|19074536|ref|NP_586042.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
gi|19069178|emb|CAD25646.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
Length = 766
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/500 (42%), Positives = 304/500 (60%), Gaps = 34/500 (6%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VF FR NQRE+I A +SG DVFVLMPTGGGKS+ YQLPAL+ GIT+V+SPL+SL
Sbjct: 230 REVFKMKEFRTNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYDGITIVVSPLLSL 289
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQI +LLQ I A ++ N+ E+ + + L D K+ YVTPE +AKS
Sbjct: 290 VQDQIRNLLQKGILALPINSNLSRAERDLVFQVLGGDELICKIFYVTPELIAKSGHFHDV 349
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L L R L R VIDEAHCVSQWGHDFRPDY+ LG ++ ++P+ P++ALTATAT V+
Sbjct: 350 LSGLVCRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSMRARYPSVPIIALTATATQKVEM 409
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLS----------YGHFFLL--KE 613
D+++ LG+ C F+ SFNR NL + +++ ++ G + KE
Sbjct: 410 DILENLGIRGCETFKMSFNRSNLRYEVRAKTSTVELDIASFVQTHFPDCCGIIYCTSKKE 469
Query: 614 FYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
++S + G AFYH + +R VQ++W++ E +I AT+AFGMGI+K DVRFVI
Sbjct: 470 CEMISEKLGKYMGTAFYHAGLSKNERNSVQEKWNRGEFKVIVATIAFGMGIDKKDVRFVI 529
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ +PKS+EGY+QE GRAGRDG S CVL+Y+Y D ++ MI +G G+ +
Sbjct: 530 HYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKG-------DGGYEQ- 581
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ E+L ++ +CEN DCRR+ L HFGE+FD C+KTCDNC + +
Sbjct: 582 --------KQRQREDLEAVIQFCENKTDCRRMQVLAHFGERFDPQMCRKTCDNCRR-EGV 632
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++KD T A+ L+ LV T + + ++V++G N+ K + +G GK L K+
Sbjct: 633 VKKDYTREARDLILLV-YTSSRITLCQAVDVYKGLSNK--KSREYSGSEYYGKGKRLRKT 689
Query: 852 EASRILRHLVIEDFLMEEVK 871
RILR L+ ++ E ++
Sbjct: 690 TIERILRSLISHGYIQERIE 709
>gi|444313787|ref|XP_004177551.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
gi|387510590|emb|CCH58032.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
Length = 1416
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/509 (43%), Positives = 305/509 (59%), Gaps = 39/509 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PWT +LE K+ F FRP+Q E INAT+SG DVFVLMPTGGGKSL YQLPA+I
Sbjct: 715 YPWTSELEHRLKETFKLSGFRPHQLEAINATLSGRDVFVLMPTGGGKSLCYQLPAVIKSG 774
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A S ++++ + L+Y
Sbjct: 775 KTRGTTVVISPLISLMQDQVEHLLDNNIKACMFSSKGTADQRRQHFNLFIHGFLD--LIY 832
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R L+ L LAR+VIDEAHCVS WGHDFRPDY+ L K++FP+
Sbjct: 833 MSPEMISASEQCKRALKKLYDDGKLARVVIDEAHCVSNWGHDFRPDYKELKYFKREFPDI 892
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAER 598
P++ALTATA V+ D++ L L + + +QSFNR NL+ + K + R
Sbjct: 893 PMIALTATANEQVRMDIIHNLELNDPVFLKQSFNRNNLYYEVTKKTKNSIFQMSDEIKSR 952
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E LE G KAAFYH ++P R VQK W DEI +ICAT
Sbjct: 953 FKNQTGIVYCHSKNSCEQTSALLEKSGIKAAFYHAGMEPDDRLRVQKAWQADEIQVICAT 1012
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG+ S C+ Y+S+ D ++ MI
Sbjct: 1013 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSHCITYFSFRDIRSIQTMIE 1072
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ S + E + L ++++YC+N DCRR L L +F E F+S
Sbjct: 1073 RDK-------------NLDKSNK--EKHLNKLQQVLAYCDNITDCRRKLVLSYFNENFNS 1117
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + + E+DVT+ A ++ +LV+ + ++ + + +VF+GS + +
Sbjct: 1118 KDCHKNCDNCRFSSNAVTEERDVTEDAIRITKLVEAIHSKRVTMIYCRDVFKGSRSSKIV 1177
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLV 861
+ H L HG GK L KSE RI +L+
Sbjct: 1178 QAGHTELPEHGYGKKLQKSEIDRIFLNLI 1206
>gi|387015566|gb|AFJ49902.1| ATP-dependent DNA helicase Q1 [Crotalus adamanteus]
Length = 652
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/556 (40%), Positives = 319/556 (57%), Gaps = 52/556 (9%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S + W+ DFPW+ K+ +K FG +FRP Q E INATM+G DVF++MPTGGGKSL
Sbjct: 63 SATEDWNKEDFPWSTKIRDVLQKSFGLQNFRPLQLETINATMAGRDVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPA PG TLVI PL+SL++DQ+M L Q + AT L+ + + + E+ S
Sbjct: 123 YQLPAEGSPGFTLVICPLISLMEDQLMMLEQLGVSATLLNASSSKEHVKWVHAEMLSRNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KLLYVTPEK+AKS + + +LE L RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 QLKLLYVTPEKIAKSKMFMSKLEKAYQTGQLTRIAVDEVHCCSQWGHDFRPDYKLLGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQ---- 600
++FPN P++ LTATAT V D L + CIIF SFNRPNL+ + + Q
Sbjct: 243 RQFPNAPLIGLTATATGHVLRDAQNILCVPKCIIFTASFNRPNLYYEVRQKPSSAQNCIE 302
Query: 601 --VGLSYGHF---------FLLKEFYVVSL---ECGHKAAFYHGSIDPAQRAFVQKQWSK 646
V L G + F K+ V++ + G KA YH +++P ++ V K+W
Sbjct: 303 DIVKLINGRYKGLSGIIYCFSQKDAEQVTMSLQKLGIKAGTYHANMEPKDKSRVHKRWCA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD QR+ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQRADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC + CRR+
Sbjct: 423 IFRISTMVV-----------------MENVGQ------QKLYGMVSYCHDMGRCRRVQIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E +DSA C K CDNC + ++ + DV + + L+++++ Q+ L++
Sbjct: 460 HHFDEAWDSASCNKMCDNCCQEETLEKMDVAEHCRDLLKILEQVDQRKEKFTPLKLIDAW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV---- 882
L + + K L L A L + RI+ HL+++ +L E+ + + ++S V
Sbjct: 520 LGKGLSK-----LGLEIAAPRLPREVLERIVAHLILQQYLKEDFSFT-AFATISYVKIGP 573
Query: 883 -LKVNQSKAHNLIIGR 897
+ + + KAH + + R
Sbjct: 574 RVNLLKDKAHVITMQR 589
>gi|254583105|ref|XP_002499284.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
gi|238942858|emb|CAR31029.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
Length = 1294
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/704 (35%), Positives = 381/704 (54%), Gaps = 60/704 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+ W+ +++ + FG SFRPNQ + +N+T++G DVFVLMPTGGGKSL YQLPA++
Sbjct: 543 YAWSDEVDYRLHQSFGLRSFRPNQLQAVNSTLAGKDVFVLMPTGGGKSLCYQLPAIVKSG 602
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 603 KTRGTTIVISPLISLMQDQVEHLLNNNIKASMFSSRGTADQRRQTFNLFI--HGLLDLIY 660
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ R ++ L+ LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 661 ISPEMISASEQCKRGIKKLHNDGKLARIVVDEAHCVSNWGHDFRPDYKELKYFKREYPHV 720
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ DV+ L L + + +QSFNR NL+ CE + R
Sbjct: 721 PMMALTATASEQVRLDVIHNLELKDPVFLKQSFNRKNLFYGVVRKTKNTIAEICESINTR 780
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E ++ G + AFYH ++P +R+ VQ+ W D++ +ICAT
Sbjct: 781 FANQTGIIYCHSKNSCEQTAAQIQRNGIRCAFYHAGMEPDERSDVQRAWQNDDLQVICAT 840
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+K DVRFV H+++P+++EGY+QE GRAGRDG+ S C+ YY++ D ++ MI
Sbjct: 841 VAFGMGIDKADVRFVYHYTVPRTLEGYYQETGRAGRDGKPSFCITYYTFRDVRSIQTMIQ 900
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L ++ YCEN +DCRR L L +F E+FD+
Sbjct: 901 KDK-------------NLDKDNK--EKHLNKLQNVMMYCENGLDCRRKLVLSYFNEEFDA 945
Query: 776 AHCKKTCDN-CSKIKSFIE-KDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQYVK 832
C K CDN C+ K E +DVT+ AKK+V+LV +L + + + ++F+GS + +
Sbjct: 946 KDCHKNCDNCCNSFKVATEQRDVTEDAKKIVKLVDELQDSRVTLIYCQDIFKGSRSSKIV 1005
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H L HGAGK + KS+ RI L I ++ E + G S+ +K+ + +A
Sbjct: 1006 QAGHTELEFHGAGKSMPKSDVERIFFQL-INLGILAEYPIVNNSGFASNYVKLGK-RARE 1063
Query: 893 LIIGRQNVVLRF--PSAINSTKLSKSDVTPAKGSL--------LSGKLSPSRNDTPSQPQ 942
L+ G V ++F S+ ++ L + + P+ + L G + P
Sbjct: 1064 LLRGALPVQMQFNMSSSRPNSGLDSNALPPSSSTSRISSRTVNLGGNKRDNHTVEPISLN 1123
Query: 943 NEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM----AYHIFGNATLQHLSKRVPRTEEELL 998
NE + + +L TL G + +A L+ L+K++P +E E
Sbjct: 1124 NENEWKSTQELSELTHAYETLKEASMNAGYRMNPPVTNFIPDAALRKLAKKLPISESEFS 1183
Query: 999 EINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDS 1042
+ IG K+ V TI E + N ND N S
Sbjct: 1184 SMPEIGPRHAKKFKV-----FRKTIMELRRRRSNLGGGNDINAS 1222
>gi|354548256|emb|CCE44993.1| hypothetical protein CPAR2_407960 [Candida parapsilosis]
Length = 1080
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/544 (40%), Positives = 320/544 (58%), Gaps = 44/544 (8%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPL 442
KVF SFRPNQ E + A++ DVFVLMPTGGGKSL YQLPALI G T+VISPL
Sbjct: 558 KVFKLQSFRPNQLEAVVASLLNKDVFVLMPTGGGKSLCYQLPALIKGGHSKGTTVVISPL 617
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
+SL+QDQ+ HL+ NI A +S + + L + ++Y++PEK KS ++
Sbjct: 618 ISLMQDQVQHLIHKNIKAGMISSKANSDDNKHTLNLFREGFLD--IVYLSPEKANKSTMI 675
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
+ + L R LAR+VIDEAHC+S WGHDFRPDY+G+G K++FP P++ALTATA
Sbjct: 676 QKIIGRLYERNQLARVVIDEAHCLSSWGHDFRPDYKGMGFFKERFPAVPIMALTATANEK 735
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERL------QVGLSYGHF 608
V+ D+V L + + + +QSFNR NL+ + E + + + + G+ Y H
Sbjct: 736 VRMDIVHHLKMDSPVYLKQSFNRTNLYYEIRWKSGNYLESMKDYILSRYKNKCGIIYCHS 795
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L G K +FYH + P R +Q W K++I +ICAT+AFGMGI+KPDV
Sbjct: 796 KQSCEQTSAKLNSFGLKTSFYHAGMSPEDRFKIQTNWQKNKIQLICATIAFGMGIDKPDV 855
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH +P+S+EGY+QE GRAGRDG+ S C++YY Y D +++MI
Sbjct: 856 RFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMYYCYKDARSLQNMI------------- 902
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
H ++ G+ E + L ++V YCEN DCRR L +F E FD +CKK CDNC
Sbjct: 903 HRDADLTEEGK--ENHLAKLRQVVQYCENTTDCRRKQVLHYFNETFDPINCKKQCDNCKN 960
Query: 788 IK--SFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
+ +EKD T ++ +++LVK + ++ + H +VFRG + K H HG
Sbjct: 961 YNHVTVVEKDCTQYSQDILKLVKSIQSEKVTVLHCQDVFRGLKYNKITKMGHNNNPYHGK 1020
Query: 845 GKHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
GK+L K++ RI +L+ E+ L+E +V K G S+ ++V ++ A ++ GR+ + ++
Sbjct: 1021 GKNLDKTDVERIFFYLLSEECLVEYQVMKG---GFASNYVRVGRN-ASKVLNGRKTIKIQ 1076
Query: 904 FPSA 907
F S
Sbjct: 1077 FSST 1080
>gi|167386794|ref|XP_001737905.1| ATP-dependent helicase SGS1 [Entamoeba dispar SAW760]
gi|165899114|gb|EDR25795.1| ATP-dependent helicase SGS1, putative [Entamoeba dispar SAW760]
Length = 1162
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 253/722 (35%), Positives = 381/722 (52%), Gaps = 77/722 (10%)
Query: 341 GVSSYPVEREPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQRE 400
GV Y +++ + I K S D W +F W + ++ N VFGN SFRP+Q
Sbjct: 397 GVQKYKEKKDKRVNGIKKF----ASIDSDWEKQEFSWKENIKKCNNAVFGNDSFRPSQEA 452
Query: 401 IINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPA 460
IIN MS ++ VLMPTGGGKSL YQLP+ GIT+V+SPLVSLIQDQ+ +L++ + A
Sbjct: 453 IINCVMSRNNALVLMPTGGGKSLCYQLPSYFIKGITVVVSPLVSLIQDQVSNLVETGMEA 512
Query: 461 TFLSGNMEWTEQQEILRE--LNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARI 518
E ++ +E C K ++VTPE++ +S L +
Sbjct: 513 IAFYSGSSSEEAKQFYKESYQKEGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGMV 572
Query: 519 VIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCII 578
VIDEAHC+SQWGHDFR YQ L + Q++P P+L LTATAT VK D++ +LG+ ++
Sbjct: 573 VIDEAHCISQWGHDFRDSYQKLSVFSQEYPGIPILMLTATATERVKNDILLSLGINEAVV 632
Query: 579 FRQSFNRPNLWM-----------DCEKVAERLQVGLSYGHFFLLKEFYVVSL-----ECG 622
F QSFNR NL + E++ +R G S G + L + + + + G
Sbjct: 633 FSQSFNRKNLTYCVRPKTKGVIDEIEEMIKRKYKGQS-GIIYCLSQKNTMDVAQELNKRG 691
Query: 623 HKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGY 682
K+ +YH +D +R VQK+W E N+ICAT+AFGMGI+KPDVRFVIHHSLPKS+EGY
Sbjct: 692 IKSKYYHAGMDTKERTKVQKEWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGY 751
Query: 683 HQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF---NVANSGRV 739
+QE GRAGRDG+ + C+LYY+Y D +T + RF + N+G +
Sbjct: 752 YQESGRAGRDGEPADCILYYNYRD----------------KYT--YERFFEKDKENNGDL 793
Query: 740 --LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVT 797
++T NL ++SYCEN VDCRR L L +FGE F+S C KTCDNC D+T
Sbjct: 794 SHIQTARNNLNEVISYCENTVDCRRTLVLQYFGEIFNSKLCNKTCDNCYNPSPTEIIDMT 853
Query: 798 DTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRIL 857
+ K VE+VK Q+ +++ ++ + RG+ + K ET + K + R +
Sbjct: 854 ELGKIAVEIVK-AHQRITANMVIGIMRGT--STMGKKFGETSKGFKSAKGKTEQVMERFM 910
Query: 858 RHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSD 917
+ L +E L E+ ++ +G++S LK K L+ GR + ++ N +
Sbjct: 911 KVLYLERVL-SEMLIANSHGNISVYLK-EGPKCKELMEGRIKIKVKCKKGANQIVEINNG 968
Query: 918 VTPAKGSLLSGKLSPSRNDTPSQPQNEVDLN-LSAKLYSSLRMLRTLLVKEAG-EGVMAY 975
+ K+S +N + LN L +++ +R K+ G E ++ +
Sbjct: 969 I----------KMSEYQNSLMDK------LNELRDQIFEEVR-------KQPGKEQLLKH 1005
Query: 976 HIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSS 1035
++FG L+ ++ +PR ++E +I + + KY R + + + I + N SS
Sbjct: 1006 NLFGTRVLKKIAAIMPRNKQEFEQI-AMKRLLKEKYAERFISVVNNFISQHSSNSINTSS 1064
Query: 1036 SN 1037
N
Sbjct: 1065 FN 1066
>gi|449329518|gb|AGE95789.1| ATP-dependent DNA helicase [Encephalitozoon cuniculi]
Length = 766
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/500 (42%), Positives = 303/500 (60%), Gaps = 34/500 (6%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VF FR NQRE+I A +SG DVFVLMPTGGGKS+ YQLPAL+ GIT+V+SPL+SL
Sbjct: 230 REVFKMKEFRTNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYDGITIVVSPLLSL 289
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQI +LLQ I A ++ N+ E+ + + L D K+ YVTPE +AKS
Sbjct: 290 VQDQIRNLLQKGILALPINSNLSRAERDLVFQVLGGDELICKIFYVTPELIAKSGHFHDV 349
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L L R L R VIDEAHCVSQWGHDFRPDY+ LG ++ ++P+ P++ALTATAT V+
Sbjct: 350 LSGLVCRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSMRARYPSVPIIALTATATQKVEM 409
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLS----------YGHFFLL--KE 613
D+++ LG+ C F+ SFNR NL + +++ ++ G + KE
Sbjct: 410 DILENLGIRGCETFKMSFNRSNLRYEVRAKTSTVELDIASFVQTHFPDCCGIIYCTSKKE 469
Query: 614 FYVVS--LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
++S L AFYH + +R VQ++W++ E +I AT+AFGMGI+K DVRFVI
Sbjct: 470 CEMISEKLRKYMGTAFYHAGLSKNERNSVQEKWNRGEFKVIVATIAFGMGIDKKDVRFVI 529
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ +PKS+EGY+QE GRAGRDG S CVL+Y+Y D ++ MI +G G+ +
Sbjct: 530 HYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKKISFMIEKG-------DGGYEQ- 581
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ E+L ++ +CEN DCRR+ L HFGE+FD C+KTCDNC + +
Sbjct: 582 --------KQRQREDLEAVIQFCENKTDCRRMQVLAHFGERFDPQMCRKTCDNCRR-EGV 632
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++KD T A+ L+ LV T + + ++V++G N+ K + +G GK L K+
Sbjct: 633 VKKDYTREARDLILLV-YTSSRITLCQAVDVYKGLSNK--KSREYSGSEYYGKGKRLRKT 689
Query: 852 EASRILRHLVIEDFLMEEVK 871
RILR L+ ++ E ++
Sbjct: 690 TIERILRSLISHGYIQERIE 709
>gi|238883901|gb|EEQ47539.1| hypothetical protein CAWG_06119 [Candida albicans WO-1]
Length = 1195
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 244/666 (36%), Positives = 372/666 (55%), Gaps = 61/666 (9%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
P+ ++ + VF SFR NQ E ++AT+S DVFVLMPTGGGKSL YQLPAL+
Sbjct: 454 PFMDEVHSILNNVFKLKSFRANQLEAVSATLSNKDVFVLMPTGGGKSLCYQLPALVKSGA 513
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLS---GNMEWTEQQEILRELNSDYCKYKL 488
G T+VISPL+SL+QDQ+ HLL NI A S GN + + RE D +
Sbjct: 514 TKGTTVVISPLISLMQDQVQHLLAKNIKAGMFSSKGGNDDNKHTIHLFREGFLD-----I 568
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
+Y++PE+ KS+ + + L LAR+VIDEAHC+S WGHDFRPDYQGLG K KFP
Sbjct: 569 VYLSPERANKSNAMQTIMTKLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKDKFP 628
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------------EKVA 596
P++ALTATA V+ D++ L + + ++ +QSFNR NL+ + + +
Sbjct: 629 KVPIMALTATANEKVQMDILHNLKMKDPVLLKQSFNRTNLFYEIKLKKSNCLLEIKDYIL 688
Query: 597 ERL--QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
R + G+ Y H E + L E G K +FYH + +R +QK+W +++I +IC
Sbjct: 689 SRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHAGMSADKRFNIQKRWQENKIQVIC 748
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFVIH LP+++EGY+QE GRAGRDG S CV+YY Y D ++++
Sbjct: 749 ATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAGRDGNFSECVMYYCYKDARSLQNL 808
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I + ++ SGR E++ L +++ YCEN DCRR L +F E F
Sbjct: 809 IQRDE-------------ELSESGR--ESHLAKLRQVIQYCENTTDCRRKQVLQYFNETF 853
Query: 774 DSAHCKKTCDNCSKIK--SFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQY 830
D A+C K CDNC + +EKD T+ AK +++LVK + +Q + + +VFRG ++
Sbjct: 854 DPANCHKQCDNCRDYNHVTSVEKDCTEYAKDIIKLVKSIQDEQVTVLYCQDVFRGLSHKK 913
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSK 889
+ + H HG G+ L K++ RI +L+ + ++E V G + +KV ++
Sbjct: 914 ITEAGHHENEYHGKGQSLDKNDVERIFFYLLSQQCIVEYHVMHG---GFATDYVKVGKN- 969
Query: 890 AHNLIIGRQNVVLRF---PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVD 946
A ++ G++ +++ F P + N++ L ++ K +R T VD
Sbjct: 970 ADVVLNGQKKIIISFSSRPGSANNS-LGRTAANTGKPVEYQESFITARQMT------TVD 1022
Query: 947 LNLSAKLYSSLRMLRTLLVKEAGE-GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGK 1005
+ S+ L+ LR K + E + I G TL+ +S ++P +++ ++ GI K
Sbjct: 1023 VPDSSFSQRCLQELREAREKASTECSISNSQIVGEVTLRDMSAKLPTNKKDFAKLEGIKK 1082
Query: 1006 AKVSKY 1011
++ +
Sbjct: 1083 GQLEHF 1088
>gi|429855219|gb|ELA30187.1| RecQ family ATP-dependent DNA helicase [Colletotrichum
gloeosporioides Nara gc5]
Length = 1695
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/549 (40%), Positives = 307/549 (55%), Gaps = 42/549 (7%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ + K F FRPNQ E INAT++G D FVLMPTGGGKSL YQLPA+I
Sbjct: 785 PWSPDVRRALKDRFRMRGFRPNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAIINSGK 844
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELN--SDYCKYKLL 489
GIT+V+SPL+SL+QDQ+ H+ NI A L+G ++ +I S +LL
Sbjct: 845 TRGITIVVSPLLSLMQDQVDHMSALNIQAVSLNGETTSQKRNQIFSSFKERSPELFVQLL 904
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE + S ++ L +L++ + LARIVIDEAHCVSQWGHDFRPDY+ LG L+ FP
Sbjct: 905 YVTPEMLNNSPSFMKALTTLHSGKRLARIVIDEAHCVSQWGHDFRPDYKALGKLRNHFPT 964
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL---------- 599
P++ALTATAT +V D+ LG+ NC +F QSFNRPNL + + L
Sbjct: 965 VPIIALTATATQNVIVDIKHNLGMDNCEVFCQSFNRPNLTYEVRRKERELVHKIADLIQS 1024
Query: 600 ----QVGLSYGHFFLLKEFYVVSL--ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
Q G+ Y E L + G A YH + P R VQ+QW KD I+++
Sbjct: 1025 KYDQQCGIIYTLSRKTSEQVAEKLRDKYGILAHHYHAQMSPEDRIDVQRQWQKDRIHVVV 1084
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG S C+LY+ Y D + ++ M
Sbjct: 1085 ATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAGRDGNPSDCILYFGYQDVVTLRKM 1144
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I+ G + E L R+ ++C+N +CRR+ L +FGE F
Sbjct: 1145 IADGDGNED----------------QKERQRTMLNRVTAFCDNRENCRRVEILRYFGEVF 1188
Query: 774 DSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKK 833
+ C KTCDNC F ++D +D A ++ ++ ++ + + E+ G +Y
Sbjct: 1189 NGDECNKTCDNCRAGAVFEQQDFSDKAVGAIQTIR-NHEKLTVNQCREILLG--KKYPPN 1245
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
+ HG + + + E RIL L E+ L E + G L V ++ AH
Sbjct: 1246 IDEDPDDAHGIARGMKQHEVERILDRLTAEEALEETNVVNKRAGIAIPYLIVGRN-AHMF 1304
Query: 894 IIGRQNVVL 902
+ GR+ ++L
Sbjct: 1305 LSGRRKLLL 1313
>gi|50307299|ref|XP_453628.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642762|emb|CAH00724.1| KLLA0D12694p [Kluyveromyces lactis]
Length = 1367
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/559 (39%), Positives = 320/559 (57%), Gaps = 41/559 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+ WT ++ + VFG SFRPNQ E +NAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 577 YAWTSEMYHKLRHVFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSG 636
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+V+SPL+SL+QDQ+ HLL +I A+ S EQ+ + L + +L+Y
Sbjct: 637 RTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGT-AEQRRMTFNLFMNGL-LELVY 694
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE + S + + L LARIV+DEAHCVS WGHDFRPDY+ L KQ++P+
Sbjct: 695 ISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQEYPDI 754
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D++ L L N + +QSFNR NL+ C+ + +
Sbjct: 755 PMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKEKNSIFQMCDMIRTK 814
Query: 599 L--QVGLSYGHFF-LLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H ++ + + G K AFYH +DP +R VQ+ W D + +ICAT
Sbjct: 815 FKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADRVQVICAT 874
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C++YYS+ D ++ MI
Sbjct: 875 VAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQ 934
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ ++ N E + + L +++ YC+N DCRR L L +F E+FD
Sbjct: 935 KD-----------KNLDMINK----EKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDP 979
Query: 776 AHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC + + KDVT+ +K + L+K + + + H +V++GS Q +
Sbjct: 980 KDCGKNCDNCKNSSNIVYQTKDVTEESKDIANLIKSIQDSKVTLIHCQDVYKGSKYQKIV 1039
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H HG GK K++ RI LV E L E S G S+ +K+ +A +
Sbjct: 1040 QLGHHQSPYHGMGKDWKKADIERIFFKLVTERIL-NEYSVSTGRGFFSTYVKLG-PRAKD 1097
Query: 893 LIIGRQNVVLRFPSAINST 911
L G+ V +RF + +T
Sbjct: 1098 LFKGKLKVEIRFVATEETT 1116
>gi|255719436|ref|XP_002555998.1| KLTH0H02706p [Lachancea thermotolerans]
gi|238941964|emb|CAR30136.1| KLTH0H02706p [Lachancea thermotolerans CBS 6340]
Length = 1403
Score = 405 bits (1040), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/572 (40%), Positives = 329/572 (57%), Gaps = 42/572 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
F WT ++ VF FRPNQ E INA++ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 618 FEWTAEVYHRLHNVFKLPGFRPNQLEAINASLEGKDVFVLMPTGGGKSLCYQLPAVVRSG 677
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A S ++++ + L+Y
Sbjct: 678 KTSGTTVVISPLISLMQDQVEHLLAKNIKACMFSSKGTADQKRQTFNLFINGLLD--LIY 735
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ + + L + LARIV+DEAHCVS WGHDFRPDY+ L K+++P+
Sbjct: 736 ISPEMISASEQCKKAIGKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKYFKREYPDI 795
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAER 598
P++ALTATA+ V+ D+V L L N + +QSFNR NL+ + C V R
Sbjct: 796 PMIALTATASEQVRLDIVHNLQLNNPVFLKQSFNRTNLYYEVLKKSKNVVFDICNAVKTR 855
Query: 599 L--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E L+ G +A+YH ++P +R VQ+ W + I IICAT
Sbjct: 856 FKNQTGIIYCHSKNSCEQTASLLQRNGINSAYYHAGMEPDERLEVQQAWQANRIRIICAT 915
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG+ S C++YY++ D ++ MI
Sbjct: 916 VAFGMGIDKPDVRFVYHLTIPRTLEGYYQETGRAGRDGKFSFCIMYYTFRDVRTMQTMIQ 975
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L +++ YCEN DCRR L L +F E FDS
Sbjct: 976 KDK-------------NLDRENK--EKHLTKLQQVMQYCENLADCRRQLVLSYFNENFDS 1020
Query: 776 AHCKKTCDNC--SKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQYVK 832
A C++ CDNC S + E+DVT A +V+LV + G + + H ++++GS N +
Sbjct: 1021 ALCRRNCDNCKNSINTTTEERDVTHEALNIVKLVSSVQGDKVTLIHCQDIYKGSRNSKIV 1080
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+ L HG GK L KS+ R+ LV L +E + G S+ LKV KA
Sbjct: 1081 QAGHDQLEYHGMGKALPKSDIERVFFRLVTTQIL-QEYTVMNGRGFASNYLKVG-PKATQ 1138
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGS 924
L+ G +V++F +A S +S V PA +
Sbjct: 1139 LLNGNLKIVMQFAAAGESGS-RQSSVPPAPAT 1169
>gi|68477651|ref|XP_717138.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
gi|68477814|ref|XP_717059.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438756|gb|EAK98082.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438838|gb|EAK98163.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
Length = 1189
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 244/665 (36%), Positives = 369/665 (55%), Gaps = 59/665 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
P+ ++ + VF SFR NQ E ++AT+S DVFVLMPTGGGKSL YQLPAL+
Sbjct: 448 PFMDEVHSILNNVFKLKSFRANQLEAVSATLSNKDVFVLMPTGGGKSLCYQLPALVKSGA 507
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLS---GNMEWTEQQEILRELNSDYCKYKL 488
G T+VISPL+SL+QDQ+ HLL NI A S GN + + RE D +
Sbjct: 508 TKGTTVVISPLISLMQDQVQHLLAKNIKAGMFSSKGGNDDNKHTIHLFREGFLD-----I 562
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
+Y++PE+ KS+ + + L LAR+VIDEAHC+S WGHDFRPDYQGLG K KFP
Sbjct: 563 VYLSPERANKSNAMQTIMTKLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKDKFP 622
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------------EKVA 596
P++ALTATA V+ D++ L + + ++ +QSFNR NL+ + + +
Sbjct: 623 KVPIMALTATANEKVQMDILHNLKMKDPVLLKQSFNRTNLFYEIKLKKSNCLLEIKDYIL 682
Query: 597 ERL--QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
R + G+ Y H E + L E G K +FYH + +R +QK+W +++I +IC
Sbjct: 683 SRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHAGMSADKRFNIQKRWQENKIQVIC 742
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFVIH LP+++EGY+QE GRAGRDG S CV+YY Y D ++++
Sbjct: 743 ATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAGRDGNFSECVMYYCYKDARSLQNL 802
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I + ++ SGR E++ L +++ YCEN DCRR L +F E F
Sbjct: 803 IQRDE-------------ELSESGR--ESHLAKLRQVIQYCENTTDCRRKQVLQYFNETF 847
Query: 774 DSAHCKKTCDNCSKIK--SFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQY 830
D A+C K CDNC + +EKD T+ AK +++LVK + +Q + + +VFRG ++
Sbjct: 848 DPANCHKQCDNCRDYNHVTSVEKDCTEYAKDIIKLVKSIQDEQVTVLYCQDVFRGLSHKK 907
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSK 889
+ + H HG G+ L K++ RI +L+ + ++E V G + +KV ++
Sbjct: 908 ITEAGHHENEYHGKGQSLDKNDVERIFFYLLSQQCIVEYHVMHG---GFATDYVKVGKN- 963
Query: 890 AHNLIIGRQNVVLRFPS--AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDL 947
A ++ G++ +++ F S S L ++ K +R T VD+
Sbjct: 964 ADVVLNGQKKIIISFSSRPGSASNSLGRTAANTGKPVEYQESFITARQMT------TVDV 1017
Query: 948 NLSAKLYSSLRMLRTLLVKEAGE-GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKA 1006
S+ L+ LR K + E + I G TL+ +S ++P +++ ++ GI K
Sbjct: 1018 PDSSFSQRCLQELREAREKASTECSISNSQIVGEVTLRDMSAKLPTNKKDFAKLEGIKKG 1077
Query: 1007 KVSKY 1011
++ +
Sbjct: 1078 QLEHF 1082
>gi|320040058|gb|EFW21992.1| RecQ helicase MUSN [Coccidioides posadasii str. Silveira]
Length = 1569
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/773 (33%), Positives = 393/773 (50%), Gaps = 114/773 (14%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI-- 431
++PW+ ++A + +F FRPNQ E INAT+SG D FVLMPTGGGKSL YQLP+++
Sbjct: 690 NYPWSADVKAALRDIFNLRGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVVQS 749
Query: 432 --CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYK 487
G+T+VISPL+SL+ DQ+ L ++ A F++G+++ E+++IL L + +
Sbjct: 750 GRTRGVTVVISPLLSLMDDQVGQLRSLSVKAHFINGSLKAAERRQILEYLQDPRVEDQIQ 809
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPE V KS +L L L+ R+ AR+VIDEAHCVSQWGHDFRPDY+ LG ++ F
Sbjct: 810 LLYVTPEMVNKSQAMLDTLRQLHRRKKFARLVIDEAHCVSQWGHDFRPDYKELGDFRRHF 869
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERLQV 601
P P++ALTATAT +VK DV+ LG+ C F QSFNRPNL + E V E +
Sbjct: 870 PGVPLMALTATATQNVKVDVIHNLGMDGCEKFTQSFNRPNLTYEVRVKGNHEDVLENIAK 929
Query: 602 GLSYGHFFLLKEFYVVSLE---------CGH---KAAFYHGSIDPAQRAFVQKQWSKDEI 649
+ + H+ Y +S + C KA YH + P R VQ++W +
Sbjct: 930 IIDF-HYGKTGIIYCLSRKNCEKVAKDLCTKYHVKATHYHAGMAPDDRIRVQREWQDGKH 988
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
N+I AT+AFGMGI+KPDVRFVIHH++PKS+EGY+QE GRAGRDG+RS C L+Y Y D +
Sbjct: 989 NVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGKRSECFLFYGYRDVVA 1048
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
++ +I + N + + + L +V +C+N DCRR+ L +F
Sbjct: 1049 IRKIID-------------DEKNGRKDRQQKDRQHQMLQHVVQFCQNKSDCRRVQILAYF 1095
Query: 770 GEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLN 828
E F +C +TCDNC D T A ++LV +L + + + ++VFRG
Sbjct: 1096 SENFKRENCMRTCDNCQSGSKHEILDFTRYATAALKLVSRLQNDRVTLLYCIDVFRGINP 1155
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS 888
+ + H + +G G L +++ R+ LV E L+E + + +++
Sbjct: 1156 KRFWREEHTRIEEYGMGADLDRNDVERLFGKLVAEGALVE--RNIPNHKNMTEQFVELGP 1213
Query: 889 KAHNLIIGRQNVVLRFPSAINSTKLSK-----------SDVT---------PAKGSLLSG 928
+A + G Q L + NS KL+K S+VT P ++ S
Sbjct: 1214 RAADFRSGCQKFTLAVRVSPNSKKLTKPLSKSQKRNLGSNVTGVRAVMDELPQSTNVSSP 1273
Query: 929 KLSPSRNDTPSQ----------PQNEVDLNLSAKLYSSLRMLRT---------------- 962
S SR Q +NE D + + R+LR+
Sbjct: 1274 IQSVSRRRARKQCANSFEDDLEEENESDSDGFEPIRQGGRLLRSRVRDVGPRITDDGSRH 1333
Query: 963 --------------LLVKEAGEGVM-----AYHIFGNATLQHLSKRVPRTEEELLEINGI 1003
L+ K+ + +M F + L+ + R P+ + +LL I I
Sbjct: 1334 GLTQLQTMILDEFLLMAKKECQAIMLKKNLRSQPFPDRVLREMGIRFPKNKSQLLRIPDI 1393
Query: 1004 GKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNAN 1056
KV YG + L+ ++ + + + D+ + + D++D R+E P+ N
Sbjct: 1394 DPEKVDLYGDKFLKLVDMSKQRY---DEFTADAVDNHD-----REELPVPDPN 1438
>gi|302308466|ref|NP_985391.2| AFL159Wp [Ashbya gossypii ATCC 10895]
gi|299790644|gb|AAS53215.2| AFL159Wp [Ashbya gossypii ATCC 10895]
Length = 1323
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 325/556 (58%), Gaps = 43/556 (7%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---C 432
PW+ +L VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++ C
Sbjct: 547 PWSAELYHKLHNVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAIVKAGC 606
Query: 433 P-GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYV 491
G T+VISPL+SL+ DQ+ HLL NI A+ S ++++ + L+Y+
Sbjct: 607 THGTTIVISPLISLMHDQVEHLLAKNIKASMFSSKGTAEQRRQTFNLFINGL--LDLVYI 664
Query: 492 TPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 551
+PE V+ S ++ L + LARIV+DEAHCVS WGHDFRPDY+ L K ++P+ P
Sbjct: 665 SPEMVSASVQCRNAIQKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKVEYPDIP 724
Query: 552 VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERL 599
+LALTATA+ V+ D++ L L + +QSFNR NL+ + + + R
Sbjct: 725 MLALTATASEQVRMDIIHNLHLKEPVFLKQSFNRSNLYYEVLRKDKNSLKDISHSIKTRF 784
Query: 600 --QVGLSYGHFF-LLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATV 656
Q G+ Y H ++ + + G + A+YH ++P +R +Q+QW D+I +ICATV
Sbjct: 785 KGQTGIIYCHSKNSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQQQWQSDKIQVICATV 844
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGI+KPDVRFV H+++P+++EGY+QE GRAGRDG+ S C++YYS+ D ++ MI +
Sbjct: 845 AFGMGIDKPDVRFVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMYYSFRDVRNIQSMIQK 904
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
N+ + E + L +++ YCEN DCRR L L +F E+F S
Sbjct: 905 DK-------------NLDRENK--EKHLTKLQQVMQYCENTTDCRRQLVLSYFNEQFSSQ 949
Query: 777 HCKKTCDNCSKIKS--FIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKK 833
C K CDNC + + E+DVTD A ++ +LV+ + G + + H ++++GS N V +
Sbjct: 950 ECSKNCDNCQNGSNVEYEERDVTDEALQITKLVQSVEGDKVTLIHCQDIYKGSKNAKVIQ 1009
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
H+ HG GK + KS+ RI HL+ L +E + G S+ +K+ +A+ L
Sbjct: 1010 MCHDQSHYHGLGKRMTKSDIERIFFHLITSQIL-QEYSVLNGRGFASNYVKLG-PRANQL 1067
Query: 894 IIGRQNVVLRFPSAIN 909
+ G V ++F AIN
Sbjct: 1068 LRGNMKVKMQF--AIN 1081
>gi|303312131|ref|XP_003066077.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105739|gb|EER23932.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 1310
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/773 (33%), Positives = 393/773 (50%), Gaps = 114/773 (14%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI-- 431
++PW+ ++A + +F FRPNQ E INAT+SG D FVLMPTGGGKSL YQLP+++
Sbjct: 431 NYPWSADVKAALRDIFNLRGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVVQS 490
Query: 432 --CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYK 487
G+T+VISPL+SL+ DQ+ L ++ A F++G+++ E+++IL L + +
Sbjct: 491 GRTRGVTVVISPLLSLMDDQVGQLRSLSVKAHFINGSLKAAERRQILEYLQDPRVEDQIQ 550
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPE V KS +L L L+ R+ AR+VIDEAHCVSQWGHDFRPDY+ LG ++ F
Sbjct: 551 LLYVTPEMVNKSQAMLDTLRQLHRRKKFARLVIDEAHCVSQWGHDFRPDYKELGDFRRHF 610
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERLQV 601
P P++ALTATAT +VK DV+ LG+ C F QSFNRPNL + E V E +
Sbjct: 611 PGVPLMALTATATQNVKVDVIHNLGMDGCEKFTQSFNRPNLTYEVRVKGNHEDVLENIAK 670
Query: 602 GLSYGHFFLLKEFYVVSLE---------CGH---KAAFYHGSIDPAQRAFVQKQWSKDEI 649
+ + H+ Y +S + C KA YH + P R VQ++W +
Sbjct: 671 IIDF-HYGKTGIIYCLSRKNCEKVAKDLCTKYHVKATHYHAGMAPDDRIRVQREWQDGKH 729
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
N+I AT+AFGMGI+KPDVRFVIHH++PKS+EGY+QE GRAGRDG+RS C L+Y Y D +
Sbjct: 730 NVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGKRSECFLFYGYRDVVA 789
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
++ +I + N + + + L +V +C+N DCRR+ L +F
Sbjct: 790 IRKIID-------------DEKNGRKDRQQKDRQHQMLQHVVQFCQNKSDCRRVQILAYF 836
Query: 770 GEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLN 828
E F +C +TCDNC D T A ++LV +L + + + ++VFRG
Sbjct: 837 SENFKRENCMRTCDNCQSGSKHEILDFTRYATAALKLVSRLQNDRVTLLYCIDVFRGINP 896
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS 888
+ + H + +G G L +++ R+ LV E L+E + + +++
Sbjct: 897 KRFWREEHTRIEEYGMGADLDRNDVERLFGKLVAEGALVE--RNIPNHKNMTEQFVELGP 954
Query: 889 KAHNLIIGRQNVVLRFPSAINSTKLSK-----------SDVT---------PAKGSLLSG 928
+A + G Q L + NS KL+K S+VT P ++ S
Sbjct: 955 RAADFRSGCQKFTLAVRVSPNSKKLTKPLSKSQKRNLGSNVTGVRAVMDELPQSTNVSSP 1014
Query: 929 KLSPSRNDTPSQ----------PQNEVDLNLSAKLYSSLRMLRT---------------- 962
S SR Q +NE D + + R+LR+
Sbjct: 1015 IQSVSRRRARKQCANSFEDDLEEENESDSDGFEPIRQGGRLLRSRVRDVGPRITDDGSRH 1074
Query: 963 --------------LLVKEAGEGVMAY-----HIFGNATLQHLSKRVPRTEEELLEINGI 1003
L+ K+ + +M F + L+ + R P+ + +LL I I
Sbjct: 1075 GLTQLQTMILDEFLLMAKKECQAIMLKKNLRSQPFPDRVLREMGIRFPKNKSQLLRIPDI 1134
Query: 1004 GKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNAN 1056
KV YG + L+ ++ + + + D+ + + D++D R+E P+ N
Sbjct: 1135 DPEKVDLYGDKFLKLVDMSKQRY---DEFTADAVDNHD-----REELPVPDPN 1179
>gi|294658176|ref|XP_460513.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
gi|202952930|emb|CAG88826.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
Length = 1367
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 240/659 (36%), Positives = 369/659 (55%), Gaps = 61/659 (9%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLV 443
VF +FRPNQ I++T++G DVFVLMPTGGGKSL YQLPAL+ G T+V+SPL+
Sbjct: 622 VFKLSNFRPNQLHAISSTLNGKDVFVLMPTGGGKSLCYQLPALVKSGKTRGTTIVVSPLI 681
Query: 444 SLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
SL+QDQ+ HLL NI A +S +E++ L + + L+Y++PE + S +
Sbjct: 682 SLMQDQVQHLLNKNIKAGMVSSKGSASERKSTLDSFRN--GQLDLVYLSPEMINASQHIQ 739
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
R + L LAR+V+DEAHCVS WGHDFRPDY+G+ K +P PV+ALTATA V
Sbjct: 740 RIITKLYDMNELARVVVDEAHCVSSWGHDFRPDYKGMNYFKHNYPKVPVMALTATANEKV 799
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQ-------------VGLSYGHFF 609
+ D++ L + N I+ +QSFNR NL+ + + K + L+ G+ Y H
Sbjct: 800 RMDIIHHLKMDNPILLKQSFNRLNLFYEIKWKTSNTLEWIKNYILTKQVNKTGIIYCHSK 859
Query: 610 LLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L E G A++YH + P R +Q +W ++E+ IICAT+AFGMGI+KPDVR
Sbjct: 860 QSCEHTSEKLNEWGVNASYYHAGLSPTDRFEIQNKWQQNELQIICATIAFGMGIDKPDVR 919
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
+VIH +P+++EGY+QE GRAGRDG S C+++YSY D +++MI +
Sbjct: 920 YVIHLFIPRTLEGYYQETGRAGRDGAYSECIMFYSYKDARSLQNMIQRDEE--------- 970
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC--S 786
+ G+ E + L ++V YCEN DCRR L +F E+F+ C K CDNC S
Sbjct: 971 ----LDREGK--ENHLAKLRQVVQYCENTTDCRRKQVLHYFNEQFNPITCNKKCDNCINS 1024
Query: 787 KIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
+ +EKDVT AK +++LVK + + + H +VF+GS N + K H HG G
Sbjct: 1025 SNITIVEKDVTGYAKDILKLVKSIQDDRVTVLHCQDVFKGSNNSKIMKFGHNLNPYHGKG 1084
Query: 846 KHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
+ L K++ RI +L+ E L E ++ K G S+ +K+++ +A +++ R+ + + F
Sbjct: 1085 RALDKTDVERIFFYLLSEGCLCEYQIMKG---GFASNYVKLDK-QAESVLHDRKFIKINF 1140
Query: 905 PS-----AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQP-------QNEVDLNLSAK 952
S + + +S S V P G +S SR PS QN + S
Sbjct: 1141 SSESKQRSTGNATISGS-VNPTNGYQFQSFVSASRIQIPSITNFTSAGVQNSDHIKHSCN 1199
Query: 953 LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKY 1011
+++RM ++V + A ++F + TL+ ++ ++P + + ++ I K +++ +
Sbjct: 1200 ELNNMRM--QIMVDSSLNS--AENVFNDDTLKDMAHKLPTNKRDFGKLASITKEQLNYF 1254
>gi|374108619|gb|AEY97525.1| FAFL159Wp [Ashbya gossypii FDAG1]
Length = 1323
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 325/556 (58%), Gaps = 43/556 (7%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---C 432
PW+ +L VF FRPNQ E +NAT+ G DVFVLMPTGGGKSL YQLPA++ C
Sbjct: 547 PWSAELYHKLHNVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAIVKAGC 606
Query: 433 P-GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYV 491
G T+VISPL+SL+ DQ+ HLL NI A+ S ++++ + L+Y+
Sbjct: 607 THGTTIVISPLISLMHDQVEHLLAKNIKASMFSSKGTAEQRRQTFNLFINGL--LDLVYI 664
Query: 492 TPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 551
+PE V+ S ++ L + LARIV+DEAHCVS WGHDFRPDY+ L K ++P+ P
Sbjct: 665 SPEMVSASVQCRNAIQKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKVEYPDIP 724
Query: 552 VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERL 599
+LALTATA+ V+ D++ L L + +QSFNR NL+ + + + R
Sbjct: 725 MLALTATASEQVRMDIIHNLHLKEPVFLKQSFNRSNLYYEVLRKDKNSLKDISHSIKTRF 784
Query: 600 --QVGLSYGHFF-LLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATV 656
Q G+ Y H ++ + + G + A+YH ++P +R +Q+QW D+I +ICATV
Sbjct: 785 KGQTGIIYCHSKNSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQQQWQSDKIQVICATV 844
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGI+KPDVRFV H+++P+++EGY+QE GRAGRDG+ S C++YYS+ D ++ MI +
Sbjct: 845 AFGMGIDKPDVRFVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMYYSFRDVRNIQSMIQK 904
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
N+ + E + L +++ YCEN DCRR L L +F E+F S
Sbjct: 905 DK-------------NLDRENK--EKHLTKLQQVMQYCENTTDCRRQLVLSYFNEQFSSQ 949
Query: 777 HCKKTCDNCSKIKS--FIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKK 833
C K CDNC + + E+DVTD A ++ +LV+ + G + + H ++++GS N V +
Sbjct: 950 ECSKNCDNCQNGSNVEYEERDVTDEALQITKLVQSVEGDKVTLIHCQDIYKGSKNAKVIQ 1009
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
H+ HG GK + KS+ RI HL+ L +E + G S+ +K+ +A+ L
Sbjct: 1010 MCHDQSHYHGLGKRMTKSDIERIFFHLITSQIL-QEYSVLNGRGFASNYVKLG-PRANQL 1067
Query: 894 IIGRQNVVLRFPSAIN 909
+ G V ++F AIN
Sbjct: 1068 LRGNMKVKMQF--AIN 1081
>gi|452838315|gb|EME40256.1| hypothetical protein DOTSEDRAFT_179253 [Dothistroma septosporum
NZE10]
Length = 1189
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/546 (40%), Positives = 315/546 (57%), Gaps = 42/546 (7%)
Query: 349 REPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSG 408
R PF K K + + ++ ++ +PW+ +++ K+ F FR NQ E INAT+ G
Sbjct: 262 RPPFAAKTKKTPAKDLAAIER-KNFSYPWSDEVKRTLKESFKLKGFRENQCEAINATLGG 320
Query: 409 HDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLVSLIQDQIMHLLQANIPATFLS 464
D FVLMPTGGGKSL YQLPALI G+T+VISPL+SL++DQ+ HL NI A ++
Sbjct: 321 KDAFVLMPTGGGKSLCYQLPALIRGGKTRGVTVVISPLLSLMEDQVQHLRNLNIQAFLIN 380
Query: 465 GNMEWTEQQEILREL-NSDYCKY-KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDE 522
E+ +L L N D K+ LLYVTPE ++KS + L+ AR+VIDE
Sbjct: 381 SETTKEERGFLLDSLKNPDVEKFITLLYVTPEMLSKSAAINNAFTRLHQSRRFARLVIDE 440
Query: 523 AHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQS 582
AHCVSQWGHDFRPDY+ +G ++ + P PV+ALTATAT +VK D + LG+ C +F QS
Sbjct: 441 AHCVSQWGHDFRPDYKEIGEVRNRLPGVPVMALTATATENVKLDTIHNLGIKGCEVFTQS 500
Query: 583 FNRPNLWM----------DCEKVAERL------QVGLSYGHFFLLKEFYVVSLECGH--K 624
FNRPNL+ D +A + Q G+ Y E +L+ H K
Sbjct: 501 FNRPNLYYEVRMKGKGKNDLASIASLIKDDHPKQTGIIYCFSRKDCENMANALQSQHGIK 560
Query: 625 AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 684
A YH ++ ++A VQK+W ++I AT+AFGMGI+KP+VRFVIHH++PKS+EGY+Q
Sbjct: 561 AHHYHAGMEGPEKANVQKEWQAGRYHVIVATIAFGMGIDKPNVRFVIHHTIPKSLEGYYQ 620
Query: 685 ECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNT 744
E GRAGRDG+ SSC L+Y + D + K I G S E
Sbjct: 621 ETGRAGRDGKPSSCYLFYGFGDASKQKRFIDDG----------------EGSHEQKERQR 664
Query: 745 ENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLV 804
+ L +M YC+N DCRR+ L +F E+FD C CDNC+ +F + D T+ A+K +
Sbjct: 665 QMLKKMTQYCDNRSDCRRVQVLGYFSERFDPEDCDGGCDNCTSDSTFHDVDYTEYAEKAI 724
Query: 805 ELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIE 863
LV+ + ++ + H ++VFRG + + + H++L +G G L +++ R+ L+ E
Sbjct: 725 GLVRQVYKEKVTLLHCIDVFRGGKSTKITQLSHDSLDEYGYGSELDRTDLERLFYRLLSE 784
Query: 864 DFLMEE 869
D + EE
Sbjct: 785 DAIREE 790
>gi|363748979|ref|XP_003644707.1| hypothetical protein Ecym_2138 [Eremothecium cymbalariae DBVPG#7215]
gi|356888340|gb|AET37890.1| Hypothetical protein Ecym_2138 [Eremothecium cymbalariae DBVPG#7215]
Length = 1394
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/563 (38%), Positives = 327/563 (58%), Gaps = 44/563 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
PWT ++ + +F +FRPNQ E INAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 612 LPWTAEVFHKLQNIFKLPNFRPNQLEAINATLGGQDVFVLMPTGGGKSLCYQLPAIVKSG 671
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+V+SPL+SL+QDQ+ HLL NI A+ S ++++ + L+Y
Sbjct: 672 NTSGTTIVVSPLISLMQDQVEHLLAKNIKASMFSSKGTAEQRRQTFNLFINGLLD--LVY 729
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE + S ++ L L+RIV+DEAHCVS WGHDFRPDY+ L K+++PN
Sbjct: 730 ISPEMICASVQCKNAIQKLYRDHKLSRIVVDEAHCVSNWGHDFRPDYKELKFFKEEYPNI 789
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW----------MD--CEKVAER 598
P++ALTATA+ V+ D++ L L + +QSFNR NL+ MD CE + +
Sbjct: 790 PMMALTATASEQVRMDIIHNLQLRQPVFLKQSFNRTNLYYQVLRKSKNSMDEICETIKTK 849
Query: 599 L--QVGLSYGHFF-LLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H ++ + G K A+YH +DP +R VQ+ W +++ +ICAT
Sbjct: 850 FRGQTGIVYCHSKNSCEQTAATMVRSGVKCAYYHAGMDPDERLQVQQGWQSNKVQVICAT 909
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C++YYS+ D ++ MI
Sbjct: 910 VAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGSYSHCIMYYSFRDVRTIQSMIQ 969
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L +++ YCEN DCRR L L +F E F+S
Sbjct: 970 KDK-------------NLDRENK--EKHLNKLQQVMQYCENTTDCRRQLVLSYFNESFNS 1014
Query: 776 AHCKKTCDNCSKIKS--FIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
+ C K CDNC + + ++DVT A ++ LV+ + + + H ++++GS N V
Sbjct: 1015 SDCTKNCDNCRNGHNIEYEDRDVTSEALDIIRLVQSVKDDKVTLIHCQDIYKGSKNAKVI 1074
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ H+ HG GK ++K++ RI HL+ L +E + G S +K+ KA+N
Sbjct: 1075 QMCHDQSEFHGLGKRISKADIERIFFHLITLQIL-QEYSVMNGRGFASDYVKLG-PKANN 1132
Query: 893 LIIGRQNVVLRFPSAINSTKLSK 915
L+ G+ V ++F + + KLS+
Sbjct: 1133 LLKGKMRVHMQFAT---TPKLSR 1152
>gi|67523261|ref|XP_659691.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|8101762|gb|AAF72650.1|AF259396_1 RecQ helicase MUSN [Emericella nidulans]
gi|40745763|gb|EAA64919.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|259487457|tpe|CBF86151.1| TPA: Putative uncharacterized proteinRecQ helicase MUSN ;
[Source:UniProtKB/TrEMBL;Acc:Q9P8H3] [Aspergillus
nidulans FGSC A4]
Length = 1534
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/521 (42%), Positives = 304/521 (58%), Gaps = 43/521 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG- 434
PWTK ++ K+ F FRPNQ E I++T+SG D FVLMPTGGGKSL YQLP++I G
Sbjct: 683 PWTKDVKIALKERFHLRGFRPNQLEAIDSTLSGKDTFVLMPTGGGKSLCYQLPSVISSGS 742
Query: 435 ---ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS--DYCKYKLL 489
+TLVISPL+SL+QDQ+ HL Q I A ++G+ E+Q I+ L+S +LL
Sbjct: 743 TRGVTLVISPLLSLMQDQVSHLRQNKIKAYLINGDTPSEERQWIMSTLSSHNPETHIELL 802
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
Y+TPE ++KS L ++E L + + LAR+VIDEAHCVSQWGHDFRPDY+ +G + + P
Sbjct: 803 YITPEMISKSHALTDRIEKLCSIQKLARVVIDEAHCVSQWGHDFRPDYKQIGAFRARIPG 862
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW----------------MDCE 593
P++ALTATAT +VK DV+ L + C +F QSFNRPNL D
Sbjct: 863 VPLMALTATATENVKVDVIHNLRMQGCEVFTQSFNRPNLTYEVRRKGKHAELLDSIADTI 922
Query: 594 KVAERLQVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINI 651
K R + G+ Y E +L + KA YH +D RA Q++W ++++
Sbjct: 923 KSTYRNKCGIVYCLSRNTCEKVAEALRTNYSIKAEHYHAGLDAETRARTQQRWQAGDVHV 982
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C LY+S+ D ++
Sbjct: 983 IVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGRRSGCYLYFSHRDVSTMQ 1042
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
MI + E S + GR T L +V YCEN DCRR+ L +F E
Sbjct: 1043 SMIEKN--EDS---------DDVQKGR----QTRMLNDVVKYCENANDCRRVQILAYFSE 1087
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL---TGQQFSSSHILEVFRGSLN 828
F C +CDNC +F +D ++ A +++V+ ++ + S+ + +FRG+
Sbjct: 1088 SFKRQDCNASCDNCKSGDTFEVQDFSEHASAAIKIVRYFQERNERATLSYCVNIFRGTTK 1147
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ E S G G +A +A R+ R L E L EE
Sbjct: 1148 SFRSPEHREAPSF-GDGSGIAVGDAERLFRKLHSERALTEE 1187
>gi|241999220|ref|XP_002434253.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215496012|gb|EEC05653.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 556
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/563 (40%), Positives = 322/563 (57%), Gaps = 66/563 (11%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
+ + FP + ++ + VFG FR NQ E INA + G D F+LMPTGGGKSL YQLPA
Sbjct: 7 FKGFGFPHSAEMRSKFGSVFGLKQFRLNQLEAINAALLGEDCFILMPTGGGKSLCYQLPA 66
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
++ G+T+VISPL SLI DQ+ L ++PA LSG+ ++ + +L S + +LL
Sbjct: 67 VVSEGVTVVISPLKSLIYDQVQKLGSLDVPANHLSGD---SDDFSVYSDLRSTQPRLRLL 123
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEKV+ S LL L L+A L+R VIDEAHCVSQWGHDFRPDY+ L +L++KF
Sbjct: 124 YVTPEKVSASGRLLDALSRLHANGRLSRFVIDEAHCVSQWGHDFRPDYKKLSVLREKFSG 183
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFF 609
P++ALTATAT V+ D++ LG+ + F QSFNRPNL R ++ L G
Sbjct: 184 VPMMALTATATPRVRTDILHQLGMRDPKWFLQSFNRPNL---------RYEIRLKSGKVG 234
Query: 610 LLKE---------------FYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQ 643
+E Y S EC G A YH +D +R VQ++
Sbjct: 235 TAREVLEVVEGKFARQSGIIYCFSRKECDDLAEELSKNGVPAVAYHAGLDDPKRNAVQQR 294
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
W D++ ++CAT+AFGMG++KPDVRFV+H++LPKS+EG++QE GRAGRDG+ +SC+L+YS
Sbjct: 295 WIDDKVRVVCATIAFGMGVDKPDVRFVVHYTLPKSMEGFYQESGRAGRDGRPASCLLFYS 354
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
++D R++ M+ + A++ +T+ NL MV++CEN DCRR
Sbjct: 355 FADVQRIRRMVE---------------MDKASNYAAKQTHLSNLWHMVNFCENRTDCRR- 398
Query: 764 LQLVHFGEKFDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHI 819
FD C++ CDNC ++ KDVT+ A+++V V+ QQ
Sbjct: 399 ---AQVSRNFDRTFCERNRRFACDNCLSRGCWVMKDVTEDAREVVRCVEELCQQ---RRK 452
Query: 820 LEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSV 879
+ V G N+ + K L LHG GK +++A R+LR L++E +L EE + + +V
Sbjct: 453 VTVNMGCTNKKMTKENFTNLRLHGRGKGYQRTDADRLLRRLILEGYLKEESVINYLEMAV 512
Query: 880 SSVLKVNQSKAHNLIIGRQNVVL 902
S V SKA L+ G V L
Sbjct: 513 SYVHP--GSKAAQLVSGSAKVSL 533
>gi|388581963|gb|EIM22269.1| ATP-dependent DNA helicase [Wallemia sebi CBS 633.66]
Length = 1115
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 297/521 (57%), Gaps = 48/521 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW++ +E +F ++FR NQRE I+AT+ DVFVLMPTGGGKS+ YQ+PA +
Sbjct: 355 YPWSRDVEKVMHDMFKLNAFRKNQREAIDATLDAKDVFVLMPTGGGKSVCYQIPACVDLG 414
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G+++VISPL+SLIQDQ+ L+ ++P+ SG +++ I +L +LLY
Sbjct: 415 KTHGVSIVISPLLSLIQDQVQQLVSKDVPSYAYSGGTALADKRAIQDDLRRPKPITRLLY 474
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
VTPE + +S+ L+ L+A++ LAR V+DEAHCVSQWGHDFRPDY LG L+ FP
Sbjct: 475 VTPEMLGQSNAFKDILKQLHAKDQLARFVVDEAHCVSQWGHDFRPDYTNLGQLRDDFPGV 534
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL------------WMDCEKVAE- 597
P +ALTATA VK D+ +L + C+ + SFNR NL + D + +
Sbjct: 535 PFMALTATANERVKSDIKNSLRMKGCVELKSSFNRKNLFYEIKPKNGKTVYADIQNLINN 594
Query: 598 --RLQVGLSYGHFFLLKEFYVVSL--ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
R Q G+ Y E L E G A YH + R +Q W K+ IIC
Sbjct: 595 KFRGQTGIIYCSSKRACEDVASKLRHEYGLPAQHYHAGLSRDDRTKIQINWQKNRFLIIC 654
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
ATVAFGMGI+KPDVRFVIH S+P+S+EGY+QE GRAGRDG+ S+C+LY++Y D I + ++
Sbjct: 655 ATVAFGMGIDKPDVRFVIHFSMPQSLEGYYQETGRAGRDGEHSNCILYFAYKDTITINYL 714
Query: 714 I--SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
I +G EQ T NL ++V +C N DCRR L +FGE
Sbjct: 715 IDNGEGTHEQK------------------ATQRSNLRQVVQFCLNKTDCRRTQVLNYFGE 756
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSS----HILEVFRGSL 827
FD C KTCDNC +KDVT+ +K V+LVK F SS H ++VF+GS
Sbjct: 757 HFDPRKCHKTCDNCFAGVGTEKKDVTEESKNAVQLVK---DVFRSSVTMLHCVDVFKGSG 813
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
++ H+ + G G H+ K + R+ + L E L E
Sbjct: 814 AAKIRDKGHDQIPSFGKGSHMEKGDVERLFQLLWTEQVLGE 854
>gi|67469885|ref|XP_650914.1| recQ family helicase [Entamoeba histolytica HM-1:IMSS]
gi|56467579|gb|EAL45525.1| recQ family helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 1182
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 253/710 (35%), Positives = 380/710 (53%), Gaps = 75/710 (10%)
Query: 355 KIIKVNYIE--GSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVF 412
K I+VN I+ S D W +F W + ++ N VFGN SFRP+Q IIN MS ++
Sbjct: 422 KDIRVNGIKKFASIDSDWEKQEFSWKENIKKCNNTVFGNDSFRPSQEAIINCVMSRNNAL 481
Query: 413 VLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPA-TFLSGNMEWTE 471
VLMPTGGGKSL YQLP+ GITLV+SPLVSLIQDQ+ +L++ + A F SG+
Sbjct: 482 VLMPTGGGKSLCYQLPSYFIKGITLVVSPLVSLIQDQVSNLVETGMEAIAFYSGSSSEDA 541
Query: 472 QQEILRELNSD-YCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWG 530
+Q + C K ++VTPE++ +S L +VIDEAHC+SQWG
Sbjct: 542 KQFYKESYQKEGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWG 601
Query: 531 HDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM 590
HDFR YQ L + Q++P P+L LTATAT VK D++ +LG+ ++F QSFNR NL
Sbjct: 602 HDFRDSYQKLSVFSQEYPGIPILMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTY 661
Query: 591 -----------DCEKVAERLQVGLSYGHFFLLKEFYVVSL-----ECGHKAAFYHGSIDP 634
+ E++ +R G S G + L + + + + G K+ +YH +D
Sbjct: 662 CVRPKTKGVIDEIEEMIKRKYKGQS-GIIYCLSQKNTMDIAQELNKRGIKSKYYHAGMDT 720
Query: 635 AQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 694
+R VQK+W E N+ICAT+AFGMGI+KPDVRFVIHHSLPKS+EGY+QE GRAGRDG+
Sbjct: 721 KERTTVQKEWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGE 780
Query: 695 RSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF---NVANSGRV--LETNTENLLR 749
+ C+LYY+Y D +T + RF + N+G + ++T NL
Sbjct: 781 PADCILYYNYRD----------------KYT--YERFFEKDKENNGDLSHIQTARNNLNE 822
Query: 750 MVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL 809
++SYCEN VDCRR L L +FGE F+S C +TCDNC D+T+ K VE+V+
Sbjct: 823 VISYCENTVDCRRTLVLQYFGEVFNSKLCNRTCDNCYNPSPTEVIDMTELGKIAVEIVR- 881
Query: 810 TGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
Q+ +++ ++ + RG+ + K ET + K + R ++ + +E L E
Sbjct: 882 AHQRITANMVIGIMRGT--STMGKKFGETSKGFKSAKGKTEQVMERFMKVMYLEKVL-SE 938
Query: 870 VKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGK 929
+ + +GS+S LK K L+ G+ + ++ N + + K
Sbjct: 939 MLIINSHGSISVYLK-EGPKCKELMEGKIKIKVKCKKGANQIVEINNGI----------K 987
Query: 930 LSPSRNDTPSQPQNEVDLN-LSAKLYSSLRMLRTLLVKEAG-EGVMAYHIFGNATLQHLS 987
+S +N + LN L +++ +R K+ G E ++ +++FG L+ ++
Sbjct: 988 MSEYQNSLMDK------LNELRDQIFEEVR-------KQPGKEQLLKHNLFGTRVLKKIA 1034
Query: 988 KRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSN 1037
+PR ++E +I + + KY R + + + I + N SS N
Sbjct: 1035 AVMPRNKQEFEQI-AMKRLLKEKYAERFISVVNNFINQHSSNSLNTSSFN 1083
>gi|449704341|gb|EMD44603.1| ATP-dependent helicase SGS1, putative [Entamoeba histolytica KU27]
Length = 1170
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 253/710 (35%), Positives = 380/710 (53%), Gaps = 75/710 (10%)
Query: 355 KIIKVNYIE--GSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVF 412
K I+VN I+ S D W +F W + ++ N VFGN SFRP+Q IIN MS ++
Sbjct: 410 KDIRVNGIKKFASIDSDWEKQEFSWKENIKKCNNTVFGNDSFRPSQEAIINCVMSRNNAL 469
Query: 413 VLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPA-TFLSGNMEWTE 471
VLMPTGGGKSL YQLP+ GITLV+SPLVSLIQDQ+ +L++ + A F SG+
Sbjct: 470 VLMPTGGGKSLCYQLPSYFIKGITLVVSPLVSLIQDQVSNLVETGMEAIAFYSGSSSEDA 529
Query: 472 QQEILRELNSD-YCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWG 530
+Q + C K ++VTPE++ +S L +VIDEAHC+SQWG
Sbjct: 530 KQFYKESYQKEGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWG 589
Query: 531 HDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM 590
HDFR YQ L + Q++P P+L LTATAT VK D++ +LG+ ++F QSFNR NL
Sbjct: 590 HDFRDSYQKLSVFSQEYPGIPILMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTY 649
Query: 591 -----------DCEKVAERLQVGLSYGHFFLLKEFYVVSL-----ECGHKAAFYHGSIDP 634
+ E++ +R G S G + L + + + + G K+ +YH +D
Sbjct: 650 CVRPKTKGVIDEIEEMIKRKYKGQS-GIIYCLSQKNTMDIAQELNKRGIKSKYYHAGMDT 708
Query: 635 AQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 694
+R VQK+W E N+ICAT+AFGMGI+KPDVRFVIHHSLPKS+EGY+QE GRAGRDG+
Sbjct: 709 KERTTVQKEWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGE 768
Query: 695 RSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF---NVANSGRV--LETNTENLLR 749
+ C+LYY+Y D +T + RF + N+G + ++T NL
Sbjct: 769 PADCILYYNYRD----------------KYT--YERFFEKDKENNGDLSHIQTARNNLNE 810
Query: 750 MVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL 809
++SYCEN VDCRR L L +FGE F+S C +TCDNC D+T+ K VE+V+
Sbjct: 811 VISYCENTVDCRRTLVLQYFGEVFNSKLCNRTCDNCYNPSPTEVIDMTELGKIAVEIVR- 869
Query: 810 TGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
Q+ +++ ++ + RG+ + K ET + K + R ++ + +E L E
Sbjct: 870 AHQRITANMVIGIMRGT--STMGKKFGETSKGFKSAKGKTEQVMERFMKVMYLEKVL-SE 926
Query: 870 VKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGK 929
+ + +GS+S LK K L+ G+ + ++ N + + K
Sbjct: 927 MLIINSHGSISVYLK-EGPKCKELMEGKIKIKVKCKKGANQIVEINNGI----------K 975
Query: 930 LSPSRNDTPSQPQNEVDLN-LSAKLYSSLRMLRTLLVKEAG-EGVMAYHIFGNATLQHLS 987
+S +N + LN L +++ +R K+ G E ++ +++FG L+ ++
Sbjct: 976 MSEYQNSLMDK------LNELRDQIFEEVR-------KQPGKEQLLKHNLFGTRVLKKIA 1022
Query: 988 KRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSN 1037
+PR ++E +I + + KY R + + + I + N SS N
Sbjct: 1023 AVMPRNKQEFEQI-AMKRLLKEKYAERFISVVNNFINQHSSNSLNTSSFN 1071
>gi|397614043|gb|EJK62561.1| hypothetical protein THAOC_16821 [Thalassiosira oceanica]
Length = 1292
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 252/732 (34%), Positives = 375/732 (51%), Gaps = 117/732 (15%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K +FG+ FRP Q+E+I M G DVFVL+PTGGGKSL YQLPA PG+++VISPL++L
Sbjct: 462 KTMFGHDRFRPGQQEVIENAMRGRDVFVLLPTGGGKSLCYQLPAWCQPGLSVVISPLLAL 521
Query: 446 IQDQIMHLLQANIPATFLSGNMEW-TEQQEILRELN--SDYCKYKLLYVTPEKVAKSDVL 502
++DQ+ +++A + + FL+ + EQQ I+++LN + + KLLYVTPEK+ S ++
Sbjct: 522 MEDQVQSMVRAGVESVFLNSTQSYEDEQQFIVQKLNQLTPHGGIKLLYVTPEKLTHSGMI 581
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
++SL+ R L++R V+DEAHC+S WGHDFRPDY+ L L+ +P P++ALTATA
Sbjct: 582 RGIIQSLSQRNLVSRFVVDEAHCLSDWGHDFRPDYKNLRNLRHDYPTVPIMALTATANEQ 641
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAERL-QVGLSYGHFF 609
V +D +Q LG+ N +FR SFNRPNL + CE +AER + G+ Y
Sbjct: 642 VVKDSMQVLGMRNAFVFRSSFNRPNLHYEVRKKDTKTIDTICEYIAERRGESGVIY--CL 699
Query: 610 LLKEFYVVSLECGHK----------AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
K+ VS + +K +FYH +DPA++A +WS I ++CAT+AFG
Sbjct: 700 SKKDCENVSQKLNNKLREKGIRNIRVSFYHADVDPAEKARRHNEWSSGRIAVLCATIAFG 759
Query: 660 MG---------------------------INKPDVRFVIHHSLPKSIEGYHQECGRAGRD 692
MG ++KPDVRFV+H+S+PKSI Y+QE GRAGRD
Sbjct: 760 MGSKSSALLFCAFSATCPSDPLLSLFRHSVDKPDVRFVMHYSMPKSITHYYQESGRAGRD 819
Query: 693 GQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVS 752
G + C+L+YSY D ++ MI + NV NS E L V
Sbjct: 820 GNNADCILFYSYKDKKTLEFMIKKAD-------------NVRNSA-ACRRKIEQLYTCVR 865
Query: 753 YCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV----- 807
YCEN +CRR LQL FGE FD C +TCDNC + +++T A++++ L+
Sbjct: 866 YCENTFECRRTLQLRFFGENFDKCVCNRTCDNCRADRVPERRNMTSEAREVIALLDSLSH 925
Query: 808 KLTGQQFSSSHILEVFRGSLN-QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFL 866
+ G+ + ++E++RGS + Q+ K TL +GAG + + RI H ++ D +
Sbjct: 926 QRNGRGVTLVQLVELWRGSKSKQHTKFLNTSTLVNYGAGTKYRRDDVDRIA-HSMVFDGI 984
Query: 867 MEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF---------------------- 904
+ E+ +S+ G + + A+ ++ G + F
Sbjct: 985 LNEIAESNTAGFNCDYVSPGPN-ANAVMNGSFTFFVDFEAKKAAVVKEKKKATSKKKDGG 1043
Query: 905 ---------PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYS 955
NS + + +P LS S S+ P N +A L
Sbjct: 1044 EKKKKAKKKAKKANSEHIIEVGDSPDSDEPLSSMASKSKRGKGVLPANR-----TADLSD 1098
Query: 956 SLRMLRTLLVKEA---GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
++ L T + +E GE V ++I + +S VP T EEL E GI YG
Sbjct: 1099 RIKKLVTNMAEEEQMNGEKVFYWNILSADNISQISNEVPTTTEELAEC-GIPAMIQKNYG 1157
Query: 1013 VRLLETIESTIK 1024
R+L+ I S I+
Sbjct: 1158 ERILKNINSFIQ 1169
>gi|384487467|gb|EIE79647.1| hypothetical protein RO3G_04352 [Rhizopus delemar RA 99-880]
Length = 692
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 257/719 (35%), Positives = 393/719 (54%), Gaps = 99/719 (13%)
Query: 226 SSHIQDMKDMLIAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSH 285
++ ++ ++D ISN +LD +LS A+ + L +ER +L +Q +E + Q K++
Sbjct: 31 TAELKTLEDKRNQISNLILDGMGSLSKAEQDALMKERREL---VQKIEQFEQKLSAYKNN 87
Query: 286 FSASTTRTYQYETPQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSY 345
S +++ T + A+L +E N +S
Sbjct: 88 PSINSSSNTLATTTESALL----------------TEQTENQVTS--------------- 116
Query: 346 PVEREPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINAT 405
P R P P I + I + FPW++ ++ + F FRPNQ E IN T
Sbjct: 117 PFFRNPVKPHIPLIPTINTPVPAPVTEPTFPWSRDVKKALTQNFKLSEFRPNQLEAINTT 176
Query: 406 MSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLVSLIQDQIMHLLQA-NIPA 460
++G DVFVLMPTGGGKSL YQLPA+I G+T V+SPL+SL+QDQ+ L++ I A
Sbjct: 177 LNGDDVFVLMPTGGGKSLCYQLPAIIQRYKTQGVTFVVSPLLSLMQDQVEQLVKGRGIAA 236
Query: 461 TFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVI 520
L+ ++ +++ I L D +LLY+TPE ++KSD L ++SL+ R LAR VI
Sbjct: 237 GMLNSSVTAEQKKWIYNNLYQDTPTLQLLYITPELMSKSDQLRNVMDSLHRRNKLARFVI 296
Query: 521 DEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQAL---GLVNCI 577
DEAHCVSQWGHDFRPDY+ LG L+ +PN P++ALTATA +V++DV+ L G N +
Sbjct: 297 DEAHCVSQWGHDFRPDYKQLGSLRNIYPNVPIMALTATANDAVQKDVIHNLKRKGKRNHL 356
Query: 578 -----IFRQSFNRPNLWM-----DCEKVAERLQV--GLSYGHFFLLKEFYVVSLECGHKA 625
+Q + + DCE+VAE L+ G+S H
Sbjct: 357 ADINEFIKQHYTESGIIYCISRKDCEQVAEALRTTYGVSTKH------------------ 398
Query: 626 AFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQE 685
YHG + ++R+ VQ +W +I +I AT+AFGMGI+KPDVR+V+H S+P S+EGY+QE
Sbjct: 399 --YHGKMTSSERSEVQSEWQTGKIRVIVATIAFGMGIDKPDVRYVVHFSMPSSLEGYYQE 456
Query: 686 CGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTE 745
GRAGRDG + C LYYS+SD +I QG S + + +
Sbjct: 457 TGRAGRDGLPAICRLYYSFSDMRTHNFLIDQG----------------EGSWQQKQRQRD 500
Query: 746 NLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK---SFIEKDVTDTAKK 802
NL M+ YC+N DCRR L +FGE+F+ AHC+K CDNC + SF+ K+++ A++
Sbjct: 501 NLNTMMRYCDNKADCRRKQILSYFGERFNPAHCQKMCDNCVANQHSTSFL-KNMSTEAQQ 559
Query: 803 LVELV-KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLV 861
+ L+ ++ + + S + +VFRGS + + +H+++ L +GAGK ++K + R+L+ +V
Sbjct: 560 MARLLQQIHPDRITLSQLGDVFRGSKLKRIIEHQYDQLQGYGAGKSISKIDVDRLLKAMV 619
Query: 862 IEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTP 920
+D + + + + VS V V SK +L+ G V+L F S NS ++++ TP
Sbjct: 620 ADDIIAVKSECNSAGFPVSFV--VTSSKFESLLRGNHTVLLSFSSNGNSP--ARTNSTP 674
>gi|212529002|ref|XP_002144658.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
gi|210074056|gb|EEA28143.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
Length = 1573
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/522 (41%), Positives = 301/522 (57%), Gaps = 46/522 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
F W+K ++ + F FRP+Q E INAT+ G D FVLMPTGGGKSL YQLP++I
Sbjct: 687 FAWSKDVKTVLRDRFHLKGFRPHQLEAINATLGGKDAFVLMPTGGGKSLCYQLPSVIHSG 746
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYKL 488
G+T+V+SPL+SL++DQ+ HL + I A F++G++ ++ ++ L S Y + +L
Sbjct: 747 RTKGVTIVVSPLLSLMEDQVDHLQKLGIKAYFINGDVSSEHKRWVMSALASPYADREIEL 806
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE + K+ L L++L+ AR+VIDEAHCVSQWGHDFRPDY+ LG + KF
Sbjct: 807 LYVTPEMINKNVTLCDILKTLHDNRKFARLVIDEAHCVSQWGHDFRPDYKELGAFRSKFS 866
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAE 597
PV+ALTATAT +VK DV+ L + +C + QSFNRPNL D ++A+
Sbjct: 867 GLPVMALTATATENVKIDVINNLRMKDCEVLSQSFNRPNLTYDVLPKKGSAPDIISQIAD 926
Query: 598 ------RLQVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEI 649
R + G+ Y E L G+ KA YH + +R VQ+ W
Sbjct: 927 IIETSYRRKAGIVYCLSRKDCEKVAQELSQGYNIKATHYHAGMPSEERTSVQRDWQAGRY 986
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
++I AT+AFGMGI+KPDVRFVIHH++PKS+EGY+QE GRAGRDG+RS C L+YSY D
Sbjct: 987 DVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGKRSGCYLFYSYRDTAA 1046
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
K I Q + + N R + L +V +CEN DCRR+ L +F
Sbjct: 1047 QKRFIEQSEGD----------WQQKNRQRQM------LRHVVQFCENQSDCRRVQILAYF 1090
Query: 770 GEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL---TGQQFSSSHILEVFRGS 826
E F + C +TCDNC ++F D + AKK ++LVK G+ + H +++F GS
Sbjct: 1091 NESFSVSDCHRTCDNCKTDEAFQTIDFSTYAKKAIQLVKFFHERGEDVTILHCIDIFAGS 1150
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
+ K H + +GAG L + R+ LV ED L E
Sbjct: 1151 NKKM--KGDHAQVPQYGAGTELELGDVERLFFKLVGEDVLEE 1190
>gi|407042405|gb|EKE41307.1| recQ family helicase, putative [Entamoeba nuttalli P19]
Length = 1173
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 248/696 (35%), Positives = 373/696 (53%), Gaps = 75/696 (10%)
Query: 355 KIIKVNYIE--GSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVF 412
K I+VN I+ S D W +F W + ++ N VFGN SFRP+Q IIN MS ++
Sbjct: 413 KDIRVNGIKKFASIDSDWEKQEFSWKENIKKCNNTVFGNDSFRPSQEAIINCVMSRNNAL 472
Query: 413 VLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQ 472
VLMPTGGGKSL YQLP+ GITLV+SPLVSLIQDQ+ +L++ + A E
Sbjct: 473 VLMPTGGGKSLCYQLPSYFIKGITLVVSPLVSLIQDQVSNLVETGMEAIAFYSGSSSEEA 532
Query: 473 QEILRE--LNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWG 530
++ +E C K ++VTPE++ +S L +VIDEAHC+SQWG
Sbjct: 533 KQFYKESYQKEGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWG 592
Query: 531 HDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM 590
HDFR YQ L + Q++P P+L LTATAT VK D++ +LG+ ++F QSFNR NL
Sbjct: 593 HDFRDSYQKLSVFSQEYPGIPILMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTY 652
Query: 591 -----------DCEKVAERLQVGLSYGHFFLLKEFYVVSL-----ECGHKAAFYHGSIDP 634
+ E++ +R G S G + L + + + + G K+ +YH +D
Sbjct: 653 CVRPKTKGVIDEIEEMIKRKYKGQS-GIIYCLSQKNTMDIAQELNKRGIKSKYYHAGMDT 711
Query: 635 AQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 694
+R VQK+W E N+ICAT+AFGMGI+KPDVRFVIHHSLPKS+EGY+QE GRAGRDG+
Sbjct: 712 KERTTVQKEWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGE 771
Query: 695 RSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF---NVANSGRV--LETNTENLLR 749
+ C+LYY+Y D +T + RF + N+G + ++T NL
Sbjct: 772 PADCILYYNYRD----------------KYT--YERFFEKDKENNGDLSHIQTARNNLNE 813
Query: 750 MVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL 809
++SYCEN VDCRR L L +FGE F+S C +TCDNC D+T+ K VE+V+
Sbjct: 814 VISYCENTVDCRRTLVLQYFGEVFNSKLCNRTCDNCYNPSPTEIIDMTELGKIAVEIVR- 872
Query: 810 TGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
Q+ +++ ++ + RG+ + K ET + K + R ++ L +E L E
Sbjct: 873 AHQRITANMVIGIMRGT--STMGKKFGETSKGFKSAKGKTEQVMERFMKVLYLEKVL-SE 929
Query: 870 VKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGK 929
+ + +GS+S LK K L+ G+ + ++ N + + K
Sbjct: 930 MLIINSHGSISVYLK-EGPKCKELMEGKIKIKVKCKKGANQIVEINNGI----------K 978
Query: 930 LSPSRNDTPSQPQNEVDLN-LSAKLYSSLRMLRTLLVKEAG-EGVMAYHIFGNATLQHLS 987
+S +N + LN L +++ +R K+ G E ++ +++FG L+ ++
Sbjct: 979 MSEYQNSLMDK------LNELRDQIFEEVR-------KQPGKEQLLKHNLFGTRVLKKIA 1025
Query: 988 KRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+PR ++E +I + + KY R + + + I
Sbjct: 1026 AVMPRNKQEFEQI-AMKRLLKEKYAERFISVVNNFI 1060
>gi|9945008|gb|AAG03075.1|AF294728_1 Sgs1p [Candida albicans]
Length = 1189
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 242/665 (36%), Positives = 368/665 (55%), Gaps = 59/665 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
P+ ++ + VF SFR NQ E ++AT+S DVFVLMPTGGGKSL YQLPAL+
Sbjct: 448 PFMDEVHSILNNVFKLKSFRANQLEAVSATLSNKDVFVLMPTGGGKSLCYQLPALVKSGA 507
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLS---GNMEWTEQQEILRELNSDYCKYKL 488
G T+VISPL+SL+QDQ+ HLL NI A S GN + + RE D +
Sbjct: 508 TKGTTVVISPLISLMQDQVQHLLAKNIKAGMFSSKGGNDDNKHTIHLFREGFLD-----I 562
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
+Y++PE+ KS+ + + L LAR+VIDEAHC+S WGHDFRPDYQGLG K KFP
Sbjct: 563 VYLSPERANKSNAMQTIMTKLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKDKFP 622
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------------EKVA 596
P++ALTATA V+ D++ L + + ++ +QSFNR NL+ + + +
Sbjct: 623 KVPIMALTATANEKVQMDILHNLKIKDPVLLKQSFNRTNLFYEIKLKKSNCLLEIKDYIL 682
Query: 597 ERL--QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
R + G+ Y H E + L E G K +FYH + +R +QK+W +++I +IC
Sbjct: 683 SRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHAGMSADKRFNIQKRWQENKIQVIC 742
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFVIH LP+++EGY+QE GRAG DG S CV+YY Y D ++++
Sbjct: 743 ATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAGHDGNFSECVMYYCYKDARSLQNL 802
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I + ++ SGR E++ L +++ YCEN DCRR L +F E F
Sbjct: 803 IQRDE-------------ELSESGR--ESHLAKLRQVIQYCENTTDCRRKQVLQYFNETF 847
Query: 774 DSAHCKKTCDNCSKIK--SFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQY 830
D A+C K CDNC + +EKD T+ AK +++LVK + + + + +VFRG ++
Sbjct: 848 DPANCHKQCDNCRDYNHVTSVEKDCTEYAKDIIKLVKSIQDELVTVLYCQDVFRGLSHKK 907
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSK 889
+ + H HG G+ L K++ RI +L+ + ++E V G + +KV ++
Sbjct: 908 ITEAGHHENEYHGKGQSLDKNDVERIFFYLLSQQCIVEYHVMHG---GFATDYVKVGKN- 963
Query: 890 AHNLIIGRQNVVLRFPS--AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDL 947
A ++ G++ +++ F S S L ++ K +R T VD+
Sbjct: 964 ADVVLNGQKKIIISFSSRPGSASNSLGRTAANTGKPVEYQESFITARQMT------TVDV 1017
Query: 948 NLSAKLYSSLRMLRTLLVKEAGE-GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKA 1006
S+ L+ LR K + E + I G TL+ +S ++P +++ ++ GI K+
Sbjct: 1018 PDSSFSQRCLQELREAREKASTECSISNSQIVGEVTLRDMSAKLPTNKKDFAKLEGIKKS 1077
Query: 1007 KVSKY 1011
++ +
Sbjct: 1078 QLEHF 1082
>gi|156844324|ref|XP_001645225.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156115884|gb|EDO17367.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 1280
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 250/688 (36%), Positives = 361/688 (52%), Gaps = 73/688 (10%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI-- 431
D+ WT++L F SFR NQ E INAT+SG DVFVLMPTGGGKSL YQLPA++
Sbjct: 513 DYNWTEELYYRLHNTFRIQSFRQNQLEAINATLSGRDVFVLMPTGGGKSLCYQLPAIVKS 572
Query: 432 --CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
G T+VISPL+SL+QDQ+ HLL NI A +S +++E + L+
Sbjct: 573 GTTSGTTIVISPLISLMQDQVEHLLDKNIKACMISSKSTAAQRKETFNLFVNGLLD--LV 630
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
Y++PE ++ S R + L + L+RIV+DEAHCVS WGHDFRPDY+ L K+++PN
Sbjct: 631 YISPEMISASQQCKRAINKLYSSSKLSRIVVDEAHCVSNWGHDFRPDYKSLSFFKREYPN 690
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAE 597
P++ALTATA+ V+ D++ L + N + +QSFNR NL C +
Sbjct: 691 IPLVALTATASEQVRMDIIANLEMHNPLTLKQSFNRTNLNYQVKAKSKETINEICTLLKG 750
Query: 598 RL--QVGLSYGHFFLLKEFYVVSLECGHK--AAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
R Q G+ Y H E V HK AFYH IDPA+R +QK W K++I +IC
Sbjct: 751 RFKNQSGIIYCHSKNSCE-QVAEQISQHKIRCAFYHAGIDPAERLQIQKAWQKNQIQVIC 809
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
ATVAFGMGI+KPDVR+V H+++P+++EGY+QE GRAGRDG S C+ Y+S+ D ++ M
Sbjct: 810 ATVAFGMGIDKPDVRYVFHYTVPRTLEGYYQETGRAGRDGLYSYCICYFSFKDVRTLQTM 869
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I + +R N + + E L ++ SYC+N DCRR L +F E F
Sbjct: 870 IQKD--------KNLDRINK-------QKHLEKLQQVASYCDNVTDCRRHQILKYFNEDF 914
Query: 774 DSAHCKKTCDNCSKIKS--FIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQY 830
D + C+K CDNC S E+++T+ A +V+LVK L + + + ++F+GS N
Sbjct: 915 DPSLCEKNCDNCKNSGSTYMEEREITEEAIAIVKLVKYLKNDKVTRLYCQDIFKGSRNAK 974
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
+ + H+ L HG GK +KS+ RI L+ L E + V GS S V
Sbjct: 975 IVQLGHDRLETHGLGKAFSKSDLERIFSQLITLRILQE---YAVVNGSGFSSSYVTIGSN 1031
Query: 891 HNLI-IGRQNVVLRFP----------------SAINSTKLSKSDVTPAKGSLLSGKLSPS 933
L+ G+ V ++F +I + S+ + S S LSP+
Sbjct: 1032 SRLVEQGKMKVKMKFTVQNPSSNPSSNPSSRDKSITNFSSMISERSNKTSSFTSTNLSPN 1091
Query: 934 RNDT----PSQPQNEVDLNLSAKL------YSSLRMLRTLLVKEAGEGVMAYHIFGNATL 983
++ P Q+ L + +L Y SLR + L + Y + +
Sbjct: 1092 NSNVGVNYPIVLQDNSSLQSTQELSHITVSYESLRAVSMSLGNRMNPPITNY--LPDVLI 1149
Query: 984 QHLSKRVPRTEEELLEINGIGKAKVSKY 1011
+ ++ +P TE+E + I G KY
Sbjct: 1150 KKIAMALPETEDEFISIVGNFSNHTRKY 1177
>gi|403216335|emb|CCK70832.1| hypothetical protein KNAG_0F01640 [Kazachstania naganishii CBS 8797]
Length = 1373
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/516 (40%), Positives = 308/516 (59%), Gaps = 39/516 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ +L +VF FR NQ E INAT+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 603 YPWSGELSNKLHEVFKLPGFRSNQEEAINATLEGKDVFVLMPTGGGKSLCYQLPAVVRSG 662
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G T+VISPL+SL+QDQ+ HLL NI A S E+++ + L+Y
Sbjct: 663 KTRGTTIVISPLISLMQDQVEHLLARNIKACMFSSRGTAEERRQTFNLF--IHGLLDLIY 720
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S+ + + L+ LAR+VIDEAHCVS WGHDFRPDY+ L I K++FP+
Sbjct: 721 ISPEMISASEQCKKAIRKLHEDGNLARVVIDEAHCVSNWGHDFRPDYKELKIFKREFPDI 780
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE------------- 597
P++ALTATA+ V+ D++ L L N + +QSFNR NL+ + +K ++
Sbjct: 781 PMMALTATASEQVRMDIIHNLELKNPVFLKQSFNRTNLFYEVKKKSKNTIYEICDEIKRK 840
Query: 598 -RLQVGLSYGHFFLLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
R Q G+ Y H E L+ K A+YH ++P +R +QK W DEI +ICAT
Sbjct: 841 FRNQTGIIYCHSKNSCEQTATQLQRNRIKCAYYHAGLEPEERFKIQKSWQTDEIQVICAT 900
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG+ S C Y+S+ D ++ MI
Sbjct: 901 VAFGMGIDKPDVRFVYHFTIPRTLEGYYQETGRAGRDGKYSYCTTYFSFRDIRNMQTMIQ 960
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ N+ + E + L +++ YC+N DCRR L L +F E FD+
Sbjct: 961 KDE-------------NLDRENK--EKHLAKLQQVLGYCDNMTDCRRKLVLSYFNEDFDA 1005
Query: 776 AHCKKTCDNCSKIKS--FIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
A C K CDNC +S E+D+T+ ++ + EL++ L G + + ++F+GS + V
Sbjct: 1006 ALCHKNCDNCKNRQSSQTEERDMTEISRHIGELMESLNGSRVTLIQCQDIFKGSRSSKVI 1065
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
+ ++ LS +G G++++KS+ RI HL+ L E
Sbjct: 1066 QGGYDKLSHYGYGRNMSKSDVERIFFHLITIRVLRE 1101
>gi|366993190|ref|XP_003676360.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
gi|342302226|emb|CCC69999.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
Length = 1344
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 250/719 (34%), Positives = 387/719 (53%), Gaps = 83/719 (11%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ +++ +VF FR NQ E ++AT+SG DVFVLMPTGGGKSL YQLPA++
Sbjct: 569 PWSDEVDFKLHEVFKLPGFRSNQLEAVDATLSGKDVFVLMPTGGGKSLCYQLPAVVKSGK 628
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYV 491
G T+VISPL+SL+QDQ+ HLL +I A S ++++ + L+Y+
Sbjct: 629 TKGTTIVISPLISLMQDQVEHLLAKDIKACMFSSKGTAEQRKQTFNLF--IHGLLDLIYI 686
Query: 492 TPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 551
+PE ++ S+ R + L++ LARIV+DEAHCVS WGHDFRPDY+ L K+++P+ P
Sbjct: 687 SPEMISASEQCKRAISKLHSDGKLARIVVDEAHCVSNWGHDFRPDYKELKYFKREYPDVP 746
Query: 552 VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW--------------MDCEKVAE 597
++ALTATA+ V+ D++ L L + + +QSFNR NL+ +D K
Sbjct: 747 MIALTATASEQVRMDIIHNLELKDPVFLKQSFNRTNLYYEVKKKTKNAIFEIIDSIKTKF 806
Query: 598 RLQVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATV 656
R Q G+ Y H E L+ G K AFYH ++P R VQK W DEI +ICATV
Sbjct: 807 RNQTGIIYCHSKNSCEQTSDKLQRQGIKCAFYHAGMEPDDRLKVQKAWQADEIQVICATV 866
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG+ S C+ Y+S+ D ++ MI +
Sbjct: 867 AFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCITYFSFRDVRTMQTMIQK 926
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
N+ + E + L +++SYC+N DCRR L L +F E FDS
Sbjct: 927 DE-------------NLDRQNK--EKHLNKLQQVMSYCDNMTDCRRKLVLSYFNEDFDSK 971
Query: 777 HCKKTCDNCSKIKSFI--EKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKK 833
C K CDNC I E+D+T+ +KK++ LV+ + + + ++ +GS + + +
Sbjct: 972 LCHKNCDNCKNSAHVITEERDITEISKKIISLVEAIQNDRVTLIQCQDIVKGSRSSKIIQ 1031
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
+ L +G GK ++KS+ RI HLV L +E + G +S +KV + + L
Sbjct: 1032 SGYTNLEQYGLGKKMSKSDIERIFFHLVTIRIL-QEYSIMNNGGFAASYVKVGPN-SKKL 1089
Query: 894 IIGRQNVVLRFPSAINSTKLSKS------------------DVTPAKGSLLSGKLSPS-- 933
+ G+ +V ++F S+ ++ + S + P + + +LS
Sbjct: 1090 LDGKLDVAMQFTSSSSAGTRTPSSNEASRPSPSRMSSSRSEQMVPKPAFISAKQLSSFSY 1149
Query: 934 -------------RNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGN 980
+N+T S+ E+ ++++A Y+ LR + L VM + +
Sbjct: 1150 RGNNTEVARPISLQNNTESRSTQEL-IDITAA-YNKLREVSLGLGNRMNPPVMNF--LSD 1205
Query: 981 ATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDS 1039
L+ L+ +P T E+ I IG+ + K+ + +STI K +N S++ DS
Sbjct: 1206 VALKKLATILPVTPEQFSSIPSIGERQRKKF-----KYFKSTILNLRKNRRNISNNKDS 1259
>gi|190348308|gb|EDK40739.2| hypothetical protein PGUG_04837 [Meyerozyma guilliermondii ATCC 6260]
Length = 1176
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 246/682 (36%), Positives = 368/682 (53%), Gaps = 70/682 (10%)
Query: 356 IIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLM 415
I V + + +K P+ K++ + + F SFRPNQ E + AT+ G D FVLM
Sbjct: 483 IFPVPAAQATAGKKLPPGSEPFIKEVYSILQSTFNLSSFRPNQLEAVTATLQGKDTFVLM 542
Query: 416 PTGGGKSLTYQLPALICPG----ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTE 471
PTGGGKSL YQLPAL+ G T+VISPL+SL+QDQ+ HLL NI A +S +E
Sbjct: 543 PTGGGKSLCYQLPALVTSGRTRGTTIVISPLISLMQDQVQHLLDKNIRAGMVSSKGTASE 602
Query: 472 QQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGH 531
+++ + S + L+Y++PE V S + + LN+ + LARIV+DEAHCVS WGH
Sbjct: 603 RKQTVELFRSG--QLDLVYLSPEMVNASSQIQNIISRLNSNQQLARIVVDEAHCVSSWGH 660
Query: 532 DFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD 591
DFRPDY+G+ + KQ++PN P++ALTATA V+ D++ L + ++ +QSFNR NL+ +
Sbjct: 661 DFRPDYKGMNMFKQQYPNIPLMALTATANEKVRMDIIHHLNMTEPVLLKQSFNRTNLFYE 720
Query: 592 CEK-------------VAERLQ-VGLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQ 636
++ VA+ G+ Y H E L G K +FYH + P +
Sbjct: 721 IKRKNGNYLEWIRDYIVAKYAHNTGIIYCHSKQSCEQTSEKLNMWGLKTSFYHAGMGPTE 780
Query: 637 RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 696
R +QK+W + IICAT+AFGMGI+KPDVRFVIH +P+S+EGY+QE GRAGRDG+ S
Sbjct: 781 RFDIQKKWQDGSVKIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPS 840
Query: 697 SCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCE 755
C+++YSY D ++ MI + ++ R N N LR +V YCE
Sbjct: 841 ECIMFYSYKDARSLQSMIQRD----------------SDLDRESRENHLNKLRQVVQYCE 884
Query: 756 NDVDCRRLLQLVHFGEKFDSAHCKKTCDNC--SKIKSFIEKDVTDTAKKLVELV-KLTGQ 812
N DCRR L +F E FD C K CDNC S + +E+D+T AK ++ LV ++
Sbjct: 885 NTTDCRRKQVLHYFNEHFDPLQCSKKCDNCANSDTVTSVERDITLFAKDIISLVSEIQRD 944
Query: 813 QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME-EVK 871
+ + ++F+GS + + K + HG GK L K E RI HL+ E+ L E V
Sbjct: 945 KVTVLLCQDIFKGSNSSKITKPGYNRSPYHGKGKTLDKLEIERIFFHLLSENCLEEYSVM 1004
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
++ G S+ ++V ++ A + G++ V L F + ++ + GSL +S
Sbjct: 1005 RA---GFASNYVRVGRA-ASMVTSGQKRVKLVFTEQVQTSIRA--------GSLTESFVS 1052
Query: 932 PSRNDTPSQPQNEVDLNLSAKL--YSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKR 989
+R Q D+N SS+R L + NA+L+ +
Sbjct: 1053 -AREIAERQASLRQDINCDPHFNKLSSIRDNLNLTI-------------SNASLKEMVLL 1098
Query: 990 VPRTEEELLEINGIGKAKVSKY 1011
+P ++++ L++ GI K + +
Sbjct: 1099 LPTSKKDFLKVGGITKDQAQDF 1120
>gi|296813367|ref|XP_002847021.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
gi|238842277|gb|EEQ31939.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
Length = 1550
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/521 (41%), Positives = 307/521 (58%), Gaps = 49/521 (9%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+K +++ +++F FRPNQ E IN+T+SG D FVLMPTGGGKSL YQLP++I
Sbjct: 684 PWSKDVKSAMREIFHLRGFRPNQLESINSTLSGRDTFVLMPTGGGKSLCYQLPSIIKTGQ 743
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEI---LRELNSDYCKYKL 488
G+T+VISPL+SL+QDQ+ HL + ++ A ++G++ E+ I LR L +D +L
Sbjct: 744 TKGVTIVISPLLSLMQDQVAHLQKLHVKAFLINGDVSKDERTSIMSNLRSLRAD-SHIQL 802
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE +AKS + L L++ + LARIVIDEAHCVSQWGHDFRPDY LG +++++
Sbjct: 803 LYVTPEMLAKSRAMESALLQLHSNKKLARIVIDEAHCVSQWGHDFRPDYTALGKMRERYT 862
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK----------VAER 598
PV+ALTATAT +V+ DV+ L + C +F QSFNRPNL + K +A+
Sbjct: 863 GVPVMALTATATPNVQVDVIHNLHMKGCDVFTQSFNRPNLTYEVRKKGRAQDALKDIADL 922
Query: 599 LQVGLS--YGHFFLL------KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
+ S G + L + +S + G K A YH + +R VQ+ W
Sbjct: 923 ITTDYSGKCGIIYCLSRKTCERVAMQLSSKFGVKTAHYHAGLSSKERFAVQRDWQSGRHT 982
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+I AT+AFGMGI+K +VRFVIHHS+P+S+EGY+QE GRAGRDG+RS C LYY+Y D + +
Sbjct: 983 VIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYHDSVSI 1042
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVS-YCENDVDCRRLLQLVHF 769
+MI++ ++ + + +LR V+ +CEN DCRR+ L +F
Sbjct: 1043 NYMINKN----------------KDTTQEQKHRQRQMLRHVTQFCENITDCRRVQILAYF 1086
Query: 770 GEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLN 828
EKF C +TCDNC +F +D T A V LV K+ + + ++ FRG
Sbjct: 1087 DEKFKREDCNRTCDNCKSDFTFEIRDFTQHAAAAVRLVEKVEKAKVTVLACVDAFRG--- 1143
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ L G G L + + R+ RHL+ ED + E+
Sbjct: 1144 --YSRSELSHLPEFGYGNDLERGDVERLFRHLLYEDAIQED 1182
>gi|115399192|ref|XP_001215185.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192068|gb|EAU33768.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1367
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/522 (41%), Positives = 299/522 (57%), Gaps = 46/522 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG- 434
PW+K++ K F FR NQ E I+AT+SG D F+LMPTGGGKSL YQLP+++ G
Sbjct: 685 PWSKEVRTVLKDRFHLRGFRMNQLEAIDATLSGKDAFILMPTGGGKSLCYQLPSVVTSGA 744
Query: 435 ---ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC---KYKL 488
+T+V+SPL+SL+QDQ+ L + +I A L+G E+Q I+R L S Y + +L
Sbjct: 745 TRGVTIVVSPLLSLMQDQVSQLRKLHIKAYLLNGETPKEERQWIMRTL-SGYGAEDEIEL 803
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LY+TPE + K+ L+ LE LN + LARIVIDEAHCVSQWGHDFRPDY+ LG L+ + P
Sbjct: 804 LYITPEMLTKNQTLVNSLEKLNRKSRLARIVIDEAHCVSQWGHDFRPDYKELGNLRSQLP 863
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHF 608
P++ALTATAT +VK DV+ L + C +F QSFNRPNL + + ++ S +
Sbjct: 864 GVPMMALTATATENVKVDVLHNLQMQGCELFSQSFNRPNLTYEVRPKPSKNELLASIANI 923
Query: 609 FLLKE------FYVVSLEC------------GHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
K Y +S + G KA YH + P +R VQ W +
Sbjct: 924 ITTKYPNQSGIIYCLSRDSCEKVAKSLREDYGIKAEHYHAGMKPDERNQVQHGWQAGRSH 983
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+I AT+AFGMGI+KPDVR+VIHHSLPKS+EGY+QE GRAGRDG+RS C +YY Y D + +
Sbjct: 984 VIVATIAFGMGIDKPDVRYVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYYCYKDAMTI 1043
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
MI +G S + + L +V YCEN DCRR+ L +F
Sbjct: 1044 TRMIDRG----------------EGSKQQKSRQRQMLHNVVQYCENKSDCRRVQILAYFN 1087
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL---TGQQFSSSHILEVFRGSL 827
E F C +CDNC F D + A + +V+ G++ + S+ + ++RGS+
Sbjct: 1088 EYFRREDCNSSCDNCKSDSVFELHDFSRHAASAISVVRYFQELGEKVTLSYCVNIYRGSV 1147
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
++ + H + +G G L EA R+ L+ E L+E+
Sbjct: 1148 KRF-RSTEHRQATGYGDGSSLEMGEAERLFHRLLGEGALVED 1188
>gi|388853955|emb|CCF52453.1| related to SGS1-DNA helicase [Ustilago hordei]
Length = 1290
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/572 (39%), Positives = 335/572 (58%), Gaps = 52/572 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PWT+ + + F FR +Q E IN ++ DVFVLMPTGGGKSL YQLPA +
Sbjct: 403 YPWTRSVWYELRHRFKLKLFRAHQLEAINHILNARDVFVLMPTGGGKSLCYQLPACVMQG 462
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G+T+V+SPL+SLIQDQ+ HL+ IPAT L+G+M ++ ++ + + +LLY
Sbjct: 463 KTDGLTVVVSPLLSLIQDQVRHLISLRIPATKLTGDMSSADKNKVCQAAIAG--NIRLLY 520
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
+TPE + +S L ++ +AR ++DEAHCVSQWGHDFRP Y LG L+ +P+
Sbjct: 521 LTPEYIRQSGQAKTLFNDLYRQKKIARFIVDEAHCVSQWGHDFRPHYTELGELRLSYPDV 580
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK---------------- 594
P++ALTATA A V +DV + L + N QSFNRPNL K
Sbjct: 581 PIMALTATANARVIKDVKECLRMKNVEHISQSFNRPNLEYQVRKKPKTNVKAMEEISSLI 640
Query: 595 -VAERLQVGLSYGHFFLLKEFYV--VSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ + Q G+ Y E +S + G A YH + RA VQ++W K+E +
Sbjct: 641 LTSHKGQCGIIYCFSRESCETVAHDLSTQYGISAHHYHAKLSADDRAMVQQRWQKNEFQV 700
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG++S C+LYYS+ D +++
Sbjct: 701 IVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAGRDGKQSVCILYYSFGDISKMR 760
Query: 712 HMI--SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
MI +G +++ R LE+ L ++ +C+N++DCRR+ L +F
Sbjct: 761 SMIEKEEGKTQEA-------------KDRALES----LDQISRFCKNEIDCRRVQVLRYF 803
Query: 770 GEKFDSAHCKKTCDNCS-KIKSFIEKDVTDTAKKLVELVK-LTGQQ--FSSSHILEVFRG 825
GE F C TCDNC K S +DV++ A K V+LV+ +TG++ ++ H ++VF G
Sbjct: 804 GEDFSPEGCASTCDNCCRKTGSIRTEDVSEHAIKAVKLVQAITGKRSTWTLPHCVDVFHG 863
Query: 826 SLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFL-MEEVKKSDVYGSVSSVLK 884
S + V++ H+ +HGAG L K+E R+ HLV E L + +V+ + G +S L
Sbjct: 864 SKVKKVREAGHDKAEMHGAGSKLPKAEIHRLFEHLVSEKALRLRDVR--NRAGFNTSYLH 921
Query: 885 VNQSKAHNLIIGRQNVVLRFPSAINSTKLSKS 916
V + AH ++ G + V ++F + ++ +K+
Sbjct: 922 VGE-HAHKVLNGSRKVYMQFETGASNAGAAKA 952
>gi|343429696|emb|CBQ73268.1| related to SGS1-DNA helicase [Sporisorium reilianum SRZ2]
Length = 1258
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/575 (40%), Positives = 319/575 (55%), Gaps = 49/575 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+ WT+ + ++ F FR NQ E IN T+ G DVFVLMPTGGGKSL YQLPA I
Sbjct: 332 YDWTRDVVYALRRYFKLRRFRHNQLEAINGTLMGRDVFVLMPTGGGKSLCYQLPACIDTE 391
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G+T+VISPL+SLI DQ+ HL I A ++G+ +++ ++ +LLY
Sbjct: 392 NAKGLTIVISPLISLINDQVRHLTLKEIAAASITGDTNPADKRLVMDLARETKSSLRLLY 451
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
+TPE + S L+ L +R+ LAR V+DEAHCVSQWGHDFRP Y LG L++++P
Sbjct: 452 LTPEFIRTSPQAQLLLDELYSRKQLARFVVDEAHCVSQWGHDFRPHYTELGALRKQYPTV 511
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFL 610
P++ALTATA A V +DV L + N + SFNRPNL + R + F L
Sbjct: 512 PIMALTATANARVVKDVEACLQMKNVLQLSSSFNRPNLEYQV-RSKPRSKAVDDIASFIL 570
Query: 611 LKE------FYVVSLEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
Y +S E G A YH + RA VQ +W +E +I
Sbjct: 571 ASHKDECGIVYCLSRETCETVAADLIKHGISAHHYHARLQKDDRAMVQDKWQSNEFKVIV 630
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFVIHHSLPKS+EGY+QE GRAGRDG+ S+C+LYYSY D ++++ M
Sbjct: 631 ATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKSSACILYYSYGDVLKIEKM 690
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
+ R S ++ + ++L M +CEN ++CRR+ L +FGE F
Sbjct: 691 V---------------RGEEDKSQDAIDRSLDSLRMMQMFCENVIECRRVQVLRYFGEDF 735
Query: 774 DSAHCKKTCDNCSKIKSFIE-KDVTDTAKKLVELVK---LTGQQFSSSHILEVFRGSLNQ 829
+ C TCDNC + I +DVT A K V+LVK G ++ H EVFRG+ ++
Sbjct: 736 SADQCHSTCDNCCRKSGTIRVQDVTALAIKAVKLVKDIARLGGHWTLLHFAEVFRGNRSK 795
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIED-FLMEEVKKSDVYGSVSSVLKVNQS 888
+ H+ + GAG L+K EA R+ HL E F M++V+ G +S L V +
Sbjct: 796 KFRDVGHDKVEQCGAGSALSKDEAHRLFEHLCSEGVFKMKDVRNGS--GFHTSYL-VMAA 852
Query: 889 KAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKG 923
A L+ G++ + L I++ S PA+G
Sbjct: 853 AASQLLNGQKTISL----PISTKSSEPSAPAPARG 883
>gi|156848959|ref|XP_001647360.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156118046|gb|EDO19502.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 1332
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 333/585 (56%), Gaps = 55/585 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+ WT ++ K +F FRPNQ + +NAT+ G DVFVLMPTGGGKSL YQLPA+I
Sbjct: 540 YRWTNEVNHKLKSIFKLPGFRPNQEDAVNATLDGKDVFVLMPTGGGKSLCYQLPAMIKSG 599
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQE------ILRELNSDYC 484
G T+VISPL+SL+ DQ+ HL +I A S TEQ+ IL L+
Sbjct: 600 KTRGTTIVISPLISLMHDQVEHLKSKDIKADMFSSKGT-TEQRRNTFNLFILGLLD---- 654
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
++Y++PE V+ S+ + ++ L + LARIV+DEAHCVS WGHDFRPDY+ L K
Sbjct: 655 ---IIYISPEMVSASEQCKKAIKKLYVDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFK 711
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------C 592
+++P+ P++ALTATA V D+ L L + + +QSFNR NL+ + C
Sbjct: 712 REYPDIPLMALTATANERVILDINHNLSLKDPVFLKQSFNRTNLFYEIRIKNKNSIFEMC 771
Query: 593 EKVAERL--QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEI 649
+ R Q G+ Y H E +E G K +YH ++P R VQ+ W +D+I
Sbjct: 772 NDIKTRFRNQTGIIYCHSKNSCEQTASLIERSGVKCTYYHAGMEPEDRMKVQQAWQEDKI 831
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
+ICATVAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG S C+ Y+S+ D
Sbjct: 832 QVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFKDIRS 891
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
++ MI + N+ + E + L +++SYC+N DCRR L L +F
Sbjct: 892 IQTMIQKDQ-------------NLDRENK--EKHLNKLKQVISYCDNIADCRRKLVLSYF 936
Query: 770 GEKFDSAHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGS 826
EKFD A C+K CDNC + E D+T+ AKK+V+LV +L + + ++ ++FRGS
Sbjct: 937 NEKFDEAKCQKNCDNCKNSDKVVTQEIDITEEAKKIVKLVEQLHHTRLTLNYCQDIFRGS 996
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVN 886
+ + + H+ L HGAG + + + RI LV ++EE + G S+ LKV
Sbjct: 997 KSSRIVSNGHQNLEAHGAGSNFNRQDIGRIFLQLVAHG-IIEEYAIVNNSGFASNYLKVG 1055
Query: 887 QSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ A L+ G N+ ++ I+S++ + + K S+ + K S
Sbjct: 1056 PN-ATRLMSGNLNIPMQV--VISSSREGSATIPKGKASIKNSKDS 1097
>gi|150866421|ref|XP_001386017.2| ATP-dependent DNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149387677|gb|ABN67988.2| ATP-dependent DNA helicase, partial [Scheffersomyces stipitis CBS
6054]
Length = 1148
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/652 (36%), Positives = 357/652 (54%), Gaps = 51/652 (7%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLV 443
VF SFR NQ E + A++ DVFVLMPTGGGKSL YQLPAL+ G T+VISPL+
Sbjct: 464 VFKLQSFRSNQLEAVCASLQSKDVFVLMPTGGGKSLCYQLPALVKGGKTNGTTVVISPLI 523
Query: 444 SLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
SL+QDQ+ HLL N+ A +S E ++ + + L+Y++PEK S+V+
Sbjct: 524 SLMQDQVQHLLDKNVKAGMISSKATAEENKQTMHLFREGFLD--LVYLSPEKANTSNVVQ 581
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
+ + L LAR+VIDEAHC+S WGHDFRPDYQ +G+ K+++PN P++ALTATA V
Sbjct: 582 KIISKLYETNRLARVVIDEAHCLSSWGHDFRPDYQSMGLFKERYPNVPIMALTATANEKV 641
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQ-------------VGLSYGHFF 609
+ D+V L + N ++ +QSFNR NL+ + + K A ++ G+ Y H
Sbjct: 642 RLDIVHNLKMENAVLLKQSFNRTNLYYEIKWKAANYVEWIKDYILKNQNNKTGIIYCHSK 701
Query: 610 LLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L G AFYH + P R +Q QW I +ICAT+AFGMGI+KPDVR
Sbjct: 702 QSCEQTSAKLNSFGLHTAFYHAGMSPQDRFDIQSQWQTGRIQLICATIAFGMGIDKPDVR 761
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
+VIH +P+S+EGY+QE GRAGRDG++S C+++YSY D ++ MI +
Sbjct: 762 YVIHLFIPRSLEGYYQETGRAGRDGKQSDCIMFYSYKDARSLQSMIQRDEE--------- 812
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC--S 786
+ G+ E + L ++V YCEN DCRR L +F E F A C+K CDNC S
Sbjct: 813 ----LTKEGK--ENHLAKLRQVVQYCENTTDCRRQQVLQYFNESFSPADCRKQCDNCQNS 866
Query: 787 KIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
S +E++ T+ AK ++ LV+ + ++ + H +VF+G+ N + K H HG G
Sbjct: 867 TGVSVVERNCTEYAKNIINLVQSIQEERVTVLHCQDVFKGARNSKIMKMGHNLNPYHGKG 926
Query: 846 KHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
L K++ RI +L+ E+ L+E ++ K G S+ ++ ++ A+ ++ G + + ++F
Sbjct: 927 SSLDKTDVERIFFYLLSEECLVEYQIMKG---GFASNYVRTGKN-AYQVLRGMKQIQIQF 982
Query: 905 PSAI----NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK-LYSSLRM 959
+ N+ S + T A S L+ T + +N +A Y+ L
Sbjct: 983 STEKRVRQNTGNASSTTSTSAVHSNLNSFKYRESFVTAREVSRMNSMNSNANHAYNELNK 1042
Query: 960 LRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKY 1011
+R E G+ +L+ +S ++P + + +I GI K +V +
Sbjct: 1043 IRIEASSEI--GIPLSQFVSEISLREMSNKLPTNKRDFSKIQGILKEQVEYF 1092
>gi|389625891|ref|XP_003710599.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
gi|351650128|gb|EHA57987.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
Length = 1780
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/572 (41%), Positives = 316/572 (55%), Gaps = 50/572 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ + K F FR NQ E INAT+SG D FVLMPTGGGKSL YQLPA++
Sbjct: 855 PWSNDVRKALKDHFRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVNNGA 914
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK--YKLL 489
GIT+V+SPL+SL+QDQ+ HL NI A SG+++ T + IL LN+ + KLL
Sbjct: 915 TRGITIVVSPLLSLMQDQVDHLRDINIQAAQFSGDIDKTHKNMILDALNNKNPENFLKLL 974
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE ++KS L+ + LAR VIDEAHCVSQWGHDFRPDY+ LG L++ FPN
Sbjct: 975 YVTPEMISKSVTFTNALQRTYRNKKLARFVIDEAHCVSQWGHDFRPDYKALGELRRMFPN 1034
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERL-- 599
PV+ALTATAT +V DV LG+ C +F QSFNRPNL+ D + +AE +
Sbjct: 1035 VPVMALTATATKNVIVDVKSNLGIDGCEVFSQSFNRPNLYYDVRPKGKNLLQSIAELIQE 1094
Query: 600 ----QVGLSYGHFFLLKEFYVVSL--ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
Q G+ Y E L G A YH ++ ++ +Q++W + I ++
Sbjct: 1095 RHADQTGIIYTLARKSSENIAKKLVQTYGISAEAYHAGMETDKKTDIQRKWQRGTIKVVV 1154
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG++S C LY+ Y D ++ M
Sbjct: 1155 ATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRAGRDGEKSDCYLYFGYGDISTLRKM 1214
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I +G S + E E L R++ YCEN DCRR+ L +FGE+F
Sbjct: 1215 IKEG----------------EGSDQQKERQAEMLNRVIEYCENKRDCRRVEILRYFGERF 1258
Query: 774 DSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTG-QQFSSSHILEVFRGSLNQYVK 832
D C +CDNC F D T+ A V +K+ G ++ ++ ++ +G + VK
Sbjct: 1259 DKNECDASCDNCRDGGEFSIVDYTEVA---VAALKVIGRKRLTAKQCADILQG---KGVK 1312
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
K + +G K L + IL L ED L E K G V +A+
Sbjct: 1313 KDEPKP-DHYGVAKSLQQHVILSILYRLQAEDALEEHHKTVRSIG-VPITYYGAGIRANA 1370
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGS 924
I G Q + L +A N + + P KG+
Sbjct: 1371 FIDGHQRLELVTRTARNG---ATDNANPPKGA 1399
>gi|440468642|gb|ELQ37793.1| RecQ helicase MUSN [Magnaporthe oryzae Y34]
gi|440478855|gb|ELQ59654.1| RecQ helicase MUSN [Magnaporthe oryzae P131]
Length = 1780
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/572 (41%), Positives = 316/572 (55%), Gaps = 50/572 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ + K F FR NQ E INAT+SG D FVLMPTGGGKSL YQLPA++
Sbjct: 855 PWSNDVRKALKDHFRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVNNGA 914
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK--YKLL 489
GIT+V+SPL+SL+QDQ+ HL NI A SG+++ T + IL LN+ + KLL
Sbjct: 915 TRGITIVVSPLLSLMQDQVDHLRDINIQAAQFSGDIDKTHKNMILDALNNKNPENFLKLL 974
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE ++KS L+ + LAR VIDEAHCVSQWGHDFRPDY+ LG L++ FPN
Sbjct: 975 YVTPEMISKSVTFTNALQRTYRNKKLARFVIDEAHCVSQWGHDFRPDYKALGELRRMFPN 1034
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERL-- 599
PV+ALTATAT +V DV LG+ C +F QSFNRPNL+ D + +AE +
Sbjct: 1035 VPVMALTATATKNVIVDVKSNLGIDGCEVFSQSFNRPNLYYDVRPKGKNLLQSIAELIQE 1094
Query: 600 ----QVGLSYGHFFLLKEFYVVSL--ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
Q G+ Y E L G A YH ++ ++ +Q++W + I ++
Sbjct: 1095 RHADQTGIIYTLARKSSENIAKKLVQTYGISAEAYHAGMETDKKTDIQRKWQRGTIKVVV 1154
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG++S C LY+ Y D ++ M
Sbjct: 1155 ATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRAGRDGEKSDCYLYFGYGDISTLRKM 1214
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I +G S + E E L R++ YCEN DCRR+ L +FGE+F
Sbjct: 1215 IKEG----------------EGSDQQKERQAEMLNRVIEYCENKRDCRRVEILRYFGERF 1258
Query: 774 DSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTG-QQFSSSHILEVFRGSLNQYVK 832
D C +CDNC F D T+ A V +K+ G ++ ++ ++ +G + VK
Sbjct: 1259 DKNECDASCDNCRDGGEFSIVDYTEVA---VAALKVIGRKRLTAKQCADILQG---KGVK 1312
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
K + +G K L + IL L ED L E K G V +A+
Sbjct: 1313 KDEPKP-DHYGVAKSLQQHVILSILYRLQAEDALEEHHKTVRSIG-VPITYYGAGIRANA 1370
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGS 924
I G Q + L +A N + + P KG+
Sbjct: 1371 FIDGHQRLELVTRTARNG---ATDNANPPKGA 1399
>gi|449015395|dbj|BAM78797.1| ATP-dependent DNA helicase RecQ [Cyanidioschyzon merolae strain 10D]
Length = 1603
Score = 398 bits (1022), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/562 (40%), Positives = 317/562 (56%), Gaps = 48/562 (8%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA-LIC 432
++PW+ +L NN+ FGN FR NQ+E INA M G DVFVLMPTGGGKSL YQL A L
Sbjct: 763 NYPWSAQLHHNNRVQFGNQGFRANQKEAINAAMCGRDVFVLMPTGGGKSLVYQLAATLTG 822
Query: 433 P---GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
P G+T+V+SPL SLI DQ+M L IP L G TE +E++R+L S + K ++L
Sbjct: 823 PAGCGVTVVVSPLKSLIMDQVMRLQALRIPCGALCGATSETESRELMRDLRSLHPKTRIL 882
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK++ S+ L+ L +R+LLAR VIDEAHCVSQWGHDFRPDY+ L + KQ++P+
Sbjct: 883 YVTPEKISLSEAFRSILDWLASRKLLARFVIDEAHCVSQWGHDFRPDYKRLSLCKQRYPS 942
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD----------CEKVAERL 599
P++ALTATAT V+EDV LG+ C+ F+QSFNRPN+ + E +AE +
Sbjct: 943 VPLMALTATATREVREDVKVQLGIPRCVTFKQSFNRPNISYEVYLKGPRSKTVEWIAEFI 1002
Query: 600 QVGLSYGHFFLLKEFYVVSLECGHK---------AAFYHGSIDPAQRAFVQKQWSKDEIN 650
Q + G ++ F E K A YH + R VQ++W +
Sbjct: 1003 QNEMPRGASGIIYCFSKQECEDVAKALRRQFRIAAEHYHAGLTDESRIAVQQRWMRRATQ 1062
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+I AT+AFGMGI+KPDVRFVIH+++PK++EG++QE GRAGRDGQ + ++ +S++D R+
Sbjct: 1063 VIVATIAFGMGIDKPDVRFVIHYTMPKNVEGFYQESGRAGRDGQPARSIVLFSHADQRRL 1122
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
MI + N A L + + RM ++C +DV CRR+ L HFG
Sbjct: 1123 IGMIDK----------NSNGLTRA----ALSLQKDAVKRMAAWCLDDVSCRRVTVLAHFG 1168
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQ----QFSSSHILEVFRGS 826
E+FD C CDNC +D T TA+ +L + +S+ I RG
Sbjct: 1169 ERFDRRACSPPCDNCRNQAPCQMEDWTATARGAYQLAQWMQDVRRITPTSARIASGLRGF 1228
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIED---FLMEEVKKSDVYGSVSSVL 883
+ + + G G + + I R L + L EEV ++V+G V L
Sbjct: 1229 ESFRTTVGASPDVDIPGFGSAPPGANDNDIFRLLAEMERLHILHEEVYHNEVHGGVCGCL 1288
Query: 884 K-VNQSKA---HNLIIGRQNVV 901
+ V S++ H+L+ G + +
Sbjct: 1289 RPVPGSQSPIVHDLLYGNERRI 1310
>gi|344231853|gb|EGV63732.1| ATP-dependent DNA helicase [Candida tenuis ATCC 10573]
Length = 1031
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/605 (37%), Positives = 345/605 (57%), Gaps = 55/605 (9%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
P+ K++ + K F +FR NQ E I + + G DVFVLMPTGGGKSL YQLP+LI
Sbjct: 338 PYIKEIYSVLNKKFKLQNFRSNQFEAIISLLQGRDVFVLMPTGGGKSLCYQLPSLIKIGA 397
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G+T+VISPL+SL+QDQ+ HL NI A ++ +E++E+++I+ + + L+Y
Sbjct: 398 RNQGVTIVISPLISLMQDQVQHLKNKNIKAGMINSKIEYSEKKQIIDLFKT--AQLDLVY 455
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE V S + R ++ L + L ++++DEAHC+S WGHDFRPDY+ + I +Q +P+
Sbjct: 456 LSPEMVNSSAQIQRIIKQLYDTKQLNKVIVDEAHCISSWGHDFRPDYKAMSIFRQNYPDI 515
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD--------CEKVAERL--- 599
P++ALTATA V+ D++ L + + +F+QSFNR NL+ + E + + +
Sbjct: 516 PIMALTATANDKVRLDILHLLNMKSPKVFKQSFNRINLYYEIRMKKAGFVEDIRDTILAK 575
Query: 600 ---QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Q G+ Y H E + L + G ++AFYH + R VQ W ++ + +ICAT
Sbjct: 576 YKNQTGIIYCHSKQSCEQISMKLNQFGIESAFYHAGMSTEDRFEVQDSWQQERLRVICAT 635
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGI+KP+VRFVIH LP+++EGY+QE GRAGRDG S C++YYSY D ++ MI
Sbjct: 636 IAFGMGIDKPNVRFVIHSFLPRNLEGYYQETGRAGRDGLHSDCIMYYSYKDARNLQLMIQ 695
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ +N A + + L +++ YCEN+ DCRR L +F E FD
Sbjct: 696 KD-----------EEYNQATK----DNHLSKLRQVIQYCENNHDCRRRQVLQYFNENFDP 740
Query: 776 AHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKH 834
C+K CD+C+ S I +D TD ++ ++ LV+ + ++ + + ++F+GS N +
Sbjct: 741 KDCQKQCDSCNNNGSEISRDFTDVSRSIIRLVQSIQNEKITLLYCQDIFKGSNNSKIVSK 800
Query: 835 RHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLI 894
H L HG G L K E RI HL+ E L E S + G +S +A ++
Sbjct: 801 GHHQLEYHGMGSKLTKLEIERIFFHLICEGCLEE---YSVIKGGFASNYVRVGLQASQVL 857
Query: 895 IGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLY 954
G +++V++F + I TK TP +SG +S N PQN NLS+ +
Sbjct: 858 SGTKSIVIKFSNIIPETK-----ATP-----VSGFVSAKTNKPIKLPQN----NLSSFVN 903
Query: 955 SSLRM 959
+S RM
Sbjct: 904 ASNRM 908
>gi|448524540|ref|XP_003871523.1| Sgs1 RecQ-related DNA helicase [Candida orthopsilosis Co 90-125]
gi|380353345|emb|CCG26101.1| Sgs1 RecQ-related DNA helicase [Candida orthopsilosis]
Length = 1068
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 318/543 (58%), Gaps = 44/543 (8%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPL 442
KVF SFRPNQ E + A++ DVFVLMPTGGGKSL YQLPALI G T+VISPL
Sbjct: 547 KVFKLQSFRPNQLEAVIASLLNKDVFVLMPTGGGKSLCYQLPALIKGGHSKGTTVVISPL 606
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
+SL+QDQ+ HL+ NI A +S + + L + ++Y++PEK KS ++
Sbjct: 607 ISLMQDQVQHLIHKNIKAGMISSKANSDDNKHTLNLFREGFLD--IVYLSPEKANKSTMI 664
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
+ + L R LAR+VIDEAHC+S WGHDFRPDY+G+G K++FP P++ALTATA
Sbjct: 665 QKIIGKLYDRNQLARVVIDEAHCLSSWGHDFRPDYKGMGFFKERFPAVPIMALTATANEK 724
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERL------QVGLSYGHF 608
V+ D+V L + + + +QSFNR NL+ + E + + + + G+ Y H
Sbjct: 725 VRMDIVHHLKMNSPVYLKQSFNRTNLYYEIRWKSGNYLESMKDYILSRYKNKCGIIYCHS 784
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L G K +FYH + P R +Q W K++I +ICAT+AFGMGI+KPDV
Sbjct: 785 KQSCEQTSAKLNSFGLKTSFYHAGMTPEDRFKIQTNWQKNKIQLICATIAFGMGIDKPDV 844
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH +P+S+EGY+QE GRAGRDG+ S C++YY Y D +++MI
Sbjct: 845 RFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMYYCYKDARSLQNMI------------- 891
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
H ++ G+ E + L ++V YCEN DCRR L +F E F+ +CKK CDNC
Sbjct: 892 HRDADLTEEGK--ENHLAKLRQVVQYCENTTDCRRKQVLHYFNETFNPINCKKQCDNCKN 949
Query: 788 IK--SFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
+ +EKD T A+ +++LVK + ++ + H +VF+G + K H H
Sbjct: 950 YNHVTVVEKDCTQYAQDILKLVKSIQNEKVTVLHCQDVFKGLKYNKITKMGHNNNPYHAK 1009
Query: 845 GKHLAKSEASRILRHLVIEDFLME-EVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
GK+L K++ RI +L+ E+ L+E +V K G S+ ++V ++ A ++ G + + ++
Sbjct: 1010 GKNLDKTDVERIFFYLLSEECLVEYQVMKG---GFASNYVRVGRN-ASKVLNGNKTIKIQ 1065
Query: 904 FPS 906
F S
Sbjct: 1066 FSS 1068
>gi|258574619|ref|XP_002541491.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
gi|237901757|gb|EEP76158.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
Length = 1432
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/519 (41%), Positives = 306/519 (58%), Gaps = 41/519 (7%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ ++A + VF FRPNQ E INAT++G D FVLMPTGGGKSL YQLP+++
Sbjct: 606 PWSADVKAALRDVFKLRGFRPNQLEAINATLNGKDAFVLMPTGGGKSLCYQLPSVVQSGR 665
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS----DYCKYK 487
G+T+VISPL+SL+ DQ+ L +I A F++G++ ++ EIL L+ DY +
Sbjct: 666 TRGVTVVISPLLSLMDDQVEQLRSLSIKAHFINGSLSAADRCEILAYLHKPRVEDYLQ-- 723
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
+LYVTPE V KS V+L L L+ + AR+VIDEAHCVSQWGHDFRPDY+ LG +++F
Sbjct: 724 ILYVTPEMVNKSRVMLGALRQLHRAKKFARLVIDEAHCVSQWGHDFRPDYKELGEFRREF 783
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVA---ERLQ---- 600
P++ALTATAT +V+ DV+ LG+ C F QSFNRPNL + E L+
Sbjct: 784 RGVPLMALTATATKNVEVDVIHNLGMQGCETFTQSFNRPNLTYEVRTKVNYDETLESISR 843
Query: 601 -VGLSYGHFFLLK-------EFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEIN 650
+ YG ++ E L H +A YH +D QR VQ++W E
Sbjct: 844 IIDFHYGKTGIIYCLSRKNCERLATDLRVKHQIRATHYHAGMDADQRIDVQRKWQSGEHQ 903
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+I AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG+RS C L+Y Y D I +
Sbjct: 904 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSECFLFYGYRDAIAI 963
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
+ +I + + G+ E + L ++ +C+N DCRR+ L +F
Sbjct: 964 RKIIDDDKSGK-------------KDGQQKERQHQMLQHVIQFCQNKSDCRRVQILAYFS 1010
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQ 829
E F +C+ +CDNC D T A ++LV +L + ++ + ++VFRG+ +
Sbjct: 1011 EDFKRENCRLSCDNCQSGSKHEIVDFTQYAISALKLVSRLQHDRVTALYCIDVFRGANPK 1070
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
++ H + +G G L +++ R+ + L+ E L+E
Sbjct: 1071 RFRRDEHTLVPEYGMGADLDRNDLERMFKKLLTEGALVE 1109
>gi|320581820|gb|EFW96039.1| ATP-dependent helicase [Ogataea parapolymorpha DL-1]
Length = 1277
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 248/673 (36%), Positives = 372/673 (55%), Gaps = 60/673 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
F WT ++ + + F SFR NQ E INAT+SG DVFVLMPTGGGKSL YQLPAL+ G
Sbjct: 508 FEWTTEVYSVLRNTFKLPSFRENQLEAINATLSGEDVFVLMPTGGGKSLCYQLPALVKSG 567
Query: 435 IT----LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
IT +VISPL+SL+QDQ+ HLLQ I A ++ +++++ + + L+Y
Sbjct: 568 ITSGTTIVISPLISLMQDQVHHLLQNQIKAAMINSKSSASQRKQTFDLFVNGFLD--LVY 625
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
++PE ++ S ++ + +L+ +++LAR+V+DEAHCVS WGHDFRPDY+ L K ++P
Sbjct: 626 LSPEMISASGMVRNAIATLHKKKMLARVVVDEAHCVSSWGHDFRPDYKALSYFKTEYPEI 685
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERL--- 599
P++ALTATA V+ D++ L L + F+QSFNR NL+ + E++A+ +
Sbjct: 686 PMMALTATANEHVRMDIIHNLNLKHPKFFKQSFNRSNLYYEVLPKKKTVVEEIAQLINRK 745
Query: 600 ---QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
G+ Y H E L + G K FYH + R VQ W +EI +ICAT
Sbjct: 746 YKNMTGIIYCHSKNSCEQTATRLADYGIKCDFYHAGMTQDDRQRVQLGWQTNEIQVICAT 805
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGI+KPDVRFVIH +LP+++EGY+QE GRAGRDG+ S C++YYS D ++ MI
Sbjct: 806 IAFGMGIDKPDVRFVIHLTLPRNLEGYYQETGRAGRDGKHSDCIMYYSMRDARTLQGMIM 865
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ +RFN E + L ++ YCEN DCRR L +F E F+
Sbjct: 866 RD--------KELDRFNK-------EQHVNKLRQVTQYCENTTDCRRQQVLQYFNETFNR 910
Query: 776 AHCKKTCDNCSKIKSF-IE-KDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVK 832
C K CDNC ++F +E +D+T AK ++ LVK L G+ + +VFRGS +
Sbjct: 911 KDCHKQCDNCINGENFEVENRDMTVFAKNVINLVKTLNGENLTVIQCQDVFRGSKTAKIV 970
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
HG G+ L K E R+ HL+ E FL EE + G ++ L V KA++
Sbjct: 971 NLGLHLNEYHGNGRDLPKMEIERLFFHLLREGFL-EEKSVMNAAGFATNYL-VLGPKAND 1028
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDV--TPAKGSLLSGKLSPSR------NDTPSQPQNE 944
++ + VV+ F + +T+L + T K + LS S+ + +P +
Sbjct: 1029 VLSRGKKVVIPFTRS-KTTRLETPSLSRTANKENTAPQFLSASKFFSVGPPNASKKPVKQ 1087
Query: 945 VDLNLSA---KLYSSLRMLRTLL---VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELL 998
+D L+ K Y LR R+L + + + MA + TL+ ++ ++P T+ E
Sbjct: 1088 LDPKLADHINKSYLKLREHRSLCSTHLNHSRDSTMA----SDTTLKDMAMKLPTTKMEYD 1143
Query: 999 EINGIGKAKVSKY 1011
++G+ K + +
Sbjct: 1144 RLDGMEKNQTQYF 1156
>gi|425778070|gb|EKV16215.1| RecQ family helicase MusN [Penicillium digitatum Pd1]
gi|425780607|gb|EKV18613.1| RecQ family helicase MusN [Penicillium digitatum PHI26]
Length = 1426
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/533 (40%), Positives = 306/533 (57%), Gaps = 47/533 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS + PW++++ K F FRPNQ E I+AT++G D F+LMPTGGGKSL YQLP+
Sbjct: 552 WS--NHPWSQEVRKVLKDRFHLRGFRPNQLEAIDATLAGKDTFILMPTGGGKSLCYQLPS 609
Query: 430 LIC----PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYC 484
++ G+T+VISPL+SL++DQ+ HL + + A ++G+ E+ I+ +L N+
Sbjct: 610 VVTGGSTTGVTIVISPLLSLMEDQVSHLQKLKVKAFMINGDTNPEEKSWIMSQLTNAGGE 669
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
++LY+TPE ++KS L+R LE L+ R LAR+VIDEAHCVSQWGHDFRPDY+ LG ++
Sbjct: 670 GMEVLYITPEMLSKSQALIRALEKLHGRNRLARLVIDEAHCVSQWGHDFRPDYKELGEVR 729
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE----------K 594
+FP PV+ALTATAT +VK DV+ L + +C +F QSFNRPNL +
Sbjct: 730 ARFPGVPVMALTATATENVKVDVMHNLKITDCEVFLQSFNRPNLTYEVRSKGKNDEVLAS 789
Query: 595 VAE------RLQVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSK 646
+AE R Q G+ Y E L + KA YH + + Q+ W
Sbjct: 790 MAETISSSYRNQCGIIYCLSRKTCEKTAEDLRTKYRLKAQAYHAGMSATAKTEAQRNWQM 849
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
++II AT+AFGMGI+K DVRFV+HHS+PKS+EGY+QE GRAGRDG+RS C LY+ Y D
Sbjct: 850 GRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQETGRAGRDGKRSGCYLYFGYKD 909
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
+K MI G N GR + L +V +CEN DCRR+ L
Sbjct: 910 TATLKRMIDAGDG------------NGQQKGR----QKQMLRNVVQFCENRSDCRRVQVL 953
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKL---TGQQFSSSHILEVF 823
+F E F C TCDNC F D T+ A +++V+ T ++ + + ++
Sbjct: 954 AYFAEYFRQEDCNNTCDNCKSGLVFELHDFTEEASWAIKIVRQFQNTKEKVTVLYCCDIL 1013
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE--VKKSD 874
RG + K H + +G G +L + A R+ L+ ED L E+ + KSD
Sbjct: 1014 RGDCKR-PKAPEHRKMPGYGKGSNLDRGAAERLFYRLLGEDALAEDNVINKSD 1065
>gi|255932597|ref|XP_002557855.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582474|emb|CAP80660.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1511
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/551 (39%), Positives = 310/551 (56%), Gaps = 83/551 (15%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS + PW++++ K+ F FRPNQ E I+AT++G D F+LMPTGGGKSL YQLP+
Sbjct: 626 WS--NHPWSQEVRKVLKERFHLRGFRPNQLEAIDATLAGKDTFILMPTGGGKSLCYQLPS 683
Query: 430 LIC----PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYC 484
++ G+T+VISPL+SL++DQ+ HL + NI A ++G+ E+ I+ +L N+
Sbjct: 684 VVTGGRTTGVTIVISPLLSLMEDQVSHLRKLNIKAFMVNGDTNPEEKSWIMSQLSNAAGE 743
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
++LY+TPE ++KS L+R LE L+ R LAR+VIDEAHCVSQWGHDFRPDY+ LG ++
Sbjct: 744 GMEVLYITPEMLSKSQALIRALEKLHGRNRLARLVIDEAHCVSQWGHDFRPDYKELGEVR 803
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------- 591
+FP PV+ALTATAT +VK DV+ L + +C +F QSFNRPNL +
Sbjct: 804 ARFPGVPVMALTATATENVKVDVMHNLKITDCEVFLQSFNRPNLTYEVRSKGKNDEVLAS 863
Query: 592 -----------------------CEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAFY 628
C+KVAE LQ K++++ KA Y
Sbjct: 864 MAETITSSYQNQCGIIYCLSRKTCDKVAEDLQ-----------KKYHL-------KALAY 905
Query: 629 HGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGR 688
H + ++ Q++W ++II AT+AFGMGI+K DVRFV+HHS+PKS+EGY+QE GR
Sbjct: 906 HAGMSAKVKSEAQRKWQMGRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQETGR 965
Query: 689 AGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLL 748
AGRDG+RS C LY+ Y D +K MI G +G+ + L
Sbjct: 966 AGRDGKRSGCYLYFGYKDTATLKRMIDAG----------------DGNGQQKARQKQMLR 1009
Query: 749 RMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK 808
+V YCEN DCRR+ L +F E F C TCDNC F D T+ A +++V+
Sbjct: 1010 NVVQYCENRSDCRRVQVLAYFAEYFRREDCNNTCDNCKSDLVFELHDFTEQASWAIKIVR 1069
Query: 809 L---TGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDF 865
++ + + ++ RG + K H + +G G L + A R+ L+ ED
Sbjct: 1070 QFQNAKEKVTVLYCSDILRGDCKR-PKAPEHRMMPGYGKGSDLDRGAAERLFYRLLGEDA 1128
Query: 866 LMEE--VKKSD 874
L E+ + KSD
Sbjct: 1129 LAEDNVINKSD 1139
>gi|406603614|emb|CCH44869.1| bloom syndrome protein [Wickerhamomyces ciferrii]
Length = 1521
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/551 (39%), Positives = 317/551 (57%), Gaps = 42/551 (7%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
WT ++ +++F SFR NQ E +NAT+SG D FVLMPTGGGKSL YQLPA++ G+T
Sbjct: 688 WTPEVFEKLRQIFKLSSFRQNQLEAVNATLSGKDTFVLMPTGGGKSLCYQLPAVVKSGVT 747
Query: 437 ----LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
+V+SPL+SL+QDQ+ HL + NI A ++ E++ + L+Y++
Sbjct: 748 HGTTIVVSPLISLMQDQVEHLWEKNIKAGMINSKGSPEERRTTFNLFVDGFLD--LVYLS 805
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE ++ S+ ++ L + LAR+V+DEAHCVS WGHDFRPDY+ L K +P PV
Sbjct: 806 PEMISASNQAKNAIDRLYRQGKLARVVVDEAHCVSSWGHDFRPDYKHLSYFKTNYPEIPV 865
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERL------------ 599
+ALTATA VK D++ L L + + +QSFNR NL+ + K + +
Sbjct: 866 MALTATANDHVKMDIIHNLNLKDPVFLKQSFNRTNLFYEVLNKDKDHMKHIEMSILGKFK 925
Query: 600 -QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
Q G+ Y H E L G K AFYH + P R +QK W I +ICAT+A
Sbjct: 926 DQTGIIYCHSKNACEQTSDKLINSGIKCAFYHAGMTPEDRLDIQKAWQNGTIKVICATIA 985
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGI+K DVRFVIH +LP+++EGY+QE GRAGRDG S C ++Y + D +++MIS+
Sbjct: 986 FGMGIDKADVRFVIHLTLPRTLEGYYQETGRAGRDGNYSYCTMFYGFRDARTLQNMISRD 1045
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
++ +G+ E + L +++ YCEN DCRR L +F E+F
Sbjct: 1046 K-------------DLDKAGK--EKHLTKLRQVIQYCENSTDCRRQQVLQYFNEQFHKDQ 1090
Query: 778 CKKTCDNCSK---IKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKK 833
C K CDNC K + +KDVT+ AKK+ ELVK + ++ + + +VF+GS + V +
Sbjct: 1091 CAKNCDNCKKGSDASTKFDKDVTEYAKKMTELVKSIEHEKVTLIYCQDVFKGSKSNKVTQ 1150
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
H+ L+ HGAGK L K + RI HL+ E L EE + G SS +K+ +A L
Sbjct: 1151 AGHDNLNEHGAGKELEKVDIERIAFHLIAEKIL-EEFSIFNKAGFASSYIKLG-PQADKL 1208
Query: 894 IIGRQNVVLRF 904
+ ++ +++ F
Sbjct: 1209 LNNKKRIIMTF 1219
>gi|290490724|dbj|BAI79322.1| BLM helicase [Gallus gallus]
Length = 1380
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 250/668 (37%), Positives = 363/668 (54%), Gaps = 83/668 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG HSFR NQ E INA + G D F+LMPTGGGKSL YQLPA + G+T+VISPL SLI D
Sbjct: 631 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 690
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L +I AT+L+G++ + + +L+ KLLYVTPEKV S+ LL LE+
Sbjct: 691 QVQKLKTLDIAATYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALEN 750
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L R+LLAR VIDEAHCVSQWGHDFR DY+ L +L++KF + P++ALTATA V++D+
Sbjct: 751 LYDRKLLARFVIDEAHCVSQWGHDFRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQ 810
Query: 569 QALGLVNCIIFRQSFNRPNLWMDC-----EKVAERLQVGLSYGHFFLLKEFYVVSL-ECG 622
L ++ +F SFNR NL D +KVA + H Y +S EC
Sbjct: 811 NQLEMLKPQVFTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECD 870
Query: 623 HKAAF----------YHGSIDPAQRAFVQKQWSKDE-INIICATVAFGMGINKPDVRFVI 671
AA YH + + R VQK+W E +ICAT+AFGMGI+KPDVR+VI
Sbjct: 871 TTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVI 930
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H SLPKSIEGY+QE GRAGRDG+ S C+L+YSYSD R++ +I S H R
Sbjct: 931 HASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNS-----HTR- 984
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK-FDSAHCKK----TCDNCS 786
+T+ NL MV YCEN VDCRR+ L +FGE F+ CK CDNCS
Sbjct: 985 ---------QTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPNFCKDHPEVICDNCS 1035
Query: 787 KIKSFIEKDVTDTAKKLVELVKL-TGQ-------------QFSSSHILEVFRGSLNQYVK 832
+ K + ++VTD K ++ V+ GQ +++ + ++++F G+ + ++
Sbjct: 1036 RKKDYKSRNVTDEVKSIIRFVQQHCGQVGGINGNRNTGSGRYTLNMMVDIFLGAKSAKIQ 1095
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ G G ++ R+ R LV++ L E++ + +V+ V V KA
Sbjct: 1096 S------GIFGKGAAYSRHNVERLFRKLVLDKILDEDLYITANDQAVAYV--VLGEKAQA 1147
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK 952
++ G V F N++ + K + K S + E+ +
Sbjct: 1148 VLNGLLQV--EFHETENASAIRKQRASVTKMSQ----------------REEMVKKCLGE 1189
Query: 953 LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
L + + L + V ++IF +TL+ +++ + E LL+I+G+ + K+ KYG
Sbjct: 1190 LTDTCKTLGKIF------DVHYFNIFSTSTLKKIAETLSSDAEVLLQIDGVTEDKLEKYG 1243
Query: 1013 VRLLETIE 1020
+++ ++
Sbjct: 1244 AEIIKVMD 1251
>gi|53133486|emb|CAG32072.1| hypothetical protein RCJMB04_17c23 [Gallus gallus]
Length = 1183
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 249/668 (37%), Positives = 363/668 (54%), Gaps = 83/668 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG HSFR NQ E INA + G D F+LMPTGGGKSL YQLPA + G+T+VISPL SLI D
Sbjct: 434 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 493
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L +I +T+L+G++ + + +L+ KLLYVTPEKV S+ LL LE+
Sbjct: 494 QVQKLKTLDIASTYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALEN 553
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L R+LLAR VIDEAHCVSQWGHDFR DY+ L +L++KF + P++ALTATA V++D+
Sbjct: 554 LYNRKLLARFVIDEAHCVSQWGHDFRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQ 613
Query: 569 QALGLVNCIIFRQSFNRPNLWMDC-----EKVAERLQVGLSYGHFFLLKEFYVVSL-ECG 622
L ++ +F SFNR NL D +KVA + H Y +S EC
Sbjct: 614 NQLEMLKPQVFTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECD 673
Query: 623 HKAAF----------YHGSIDPAQRAFVQKQWSKDE-INIICATVAFGMGINKPDVRFVI 671
AA YH + + R VQK+W E +ICAT+AFGMGI+KPDVR+VI
Sbjct: 674 TTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVI 733
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H SLPKSIEGY+QE GRAGRDG+ S C+L+YSYSD R++ +I S H R
Sbjct: 734 HASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNS-----HTR- 787
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK-FDSAHCKK----TCDNCS 786
+T+ NL MV YCEN VDCRR+ L +FGE F+ CK CDNCS
Sbjct: 788 ---------QTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPNFCKDHPEVICDNCS 838
Query: 787 KIKSFIEKDVTDTAKKLVELVKL-TGQ-------------QFSSSHILEVFRGSLNQYVK 832
+ K + ++VTD K ++ V+ GQ +++ + ++++F G+ + ++
Sbjct: 839 RKKDYKSRNVTDEVKSIIRFVQQHCGQVGGINGNRNTGSGRYTLNMMVDIFLGAKSAKIQ 898
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ G G ++ R+ R LV++ L E++ + +V+ V V KA
Sbjct: 899 S------GIFGKGAAYSRHNVERLFRKLVLDKILDEDLYITANDQAVAYV--VLGEKAQA 950
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK 952
++ G V F N++ + K + K S + E+ +
Sbjct: 951 VLNGLLQV--EFHETENASAIRKQRASVTKMS----------------QREEMVKKCLGE 992
Query: 953 LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
L + + L + V ++IF +TL+ +++ + E LL+I+G+ + K+ KYG
Sbjct: 993 LTDTCKTLGKIF------DVHYFNIFSTSTLKKIAETLSSDAEVLLQIDGVTEDKLEKYG 1046
Query: 1013 VRLLETIE 1020
+++ ++
Sbjct: 1047 AEIIKVMD 1054
>gi|146413823|ref|XP_001482882.1| hypothetical protein PGUG_04837 [Meyerozyma guilliermondii ATCC 6260]
Length = 1176
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 247/683 (36%), Positives = 366/683 (53%), Gaps = 72/683 (10%)
Query: 356 IIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLM 415
I V + + +K P+ K++ + + F SFRPNQ E + AT+ G D FVLM
Sbjct: 483 IFPVPAAQATAGKKLPPGSEPFIKEVYSILQSTFNLLSFRPNQLEAVTATLQGKDTFVLM 542
Query: 416 PTGGGKSLTYQLPALICPG----ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTE 471
PTGGGKSL YQLPAL+ G T+VISPL+SL+QDQ+ HLL NI A +S +E
Sbjct: 543 PTGGGKSLCYQLPALVTSGRTRGTTIVISPLISLMQDQVQHLLDKNIRAGMVSSKGTASE 602
Query: 472 QQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGH 531
+++ + S + L+Y++PE V S + + LN+ + LARIV+DEAHCVS WGH
Sbjct: 603 RKQTVELFRSG--QLDLVYLSPEMVNASLQIQNIISRLNSNQQLARIVVDEAHCVSSWGH 660
Query: 532 DFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD 591
DFRPDY+G+ + KQ++PN P++ALTATA V+ D++ L + ++ +QSFNR NL+ +
Sbjct: 661 DFRPDYKGMNMFKQQYPNIPLMALTATANEKVRMDIIHHLNMTEPVLLKQSFNRTNLFYE 720
Query: 592 CEK-------------VAERLQ-VGLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQ 636
++ VA+ G+ Y H L E L G K +FYH + P +
Sbjct: 721 IKRKNGNYLEWIRDYIVAKYAHNTGIIYCHSKQLCEQTSEKLNMWGLKTSFYHAGMGPTE 780
Query: 637 RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 696
R +QK+W + IICAT+AFGMGI+KPDVRFVIH +P+S+EGY+QE GRAGRDG+ S
Sbjct: 781 RFDIQKKWQDGSVKIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPS 840
Query: 697 SCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCE 755
C+++YSY D ++ MI + ++ R N N LR +V YCE
Sbjct: 841 ECIMFYSYKDARSLQSMIQRD----------------SDLDRESRENHLNKLRQVVQYCE 884
Query: 756 NDVDCRRLLQLVHFGEKFDSAHCKKTCDNC--SKIKSFIEKDVTDTAKKLVELVKLTGQQ 813
N DCRR L +F E FD C K CDNC S + +E+D+T AK ++ LV L Q+
Sbjct: 885 NTTDCRRKQVLHYFNEHFDPLQCSKKCDNCANSDTVTSVERDITLFAKDIILLV-LEIQR 943
Query: 814 FSSSHIL--EVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME-EV 870
+ +L ++F+G + + K + HG GK L K E RI HL+ E+ L E V
Sbjct: 944 DKVTVLLCQDIFKGLNSSKITKPGYNRSPYHGKGKTLDKLEIERIFFHLLSENCLEEYSV 1003
Query: 871 KKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKL 930
++ G S+ ++V ++ A + G++ V L F + T + L+
Sbjct: 1004 MRA---GFASNYVRVGRA-ASMVTSGQKRVKLVFTEQVQ---------TSIRAGSLTESF 1050
Query: 931 SPSRNDTPSQPQNEVDLNLSAKL--YSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSK 988
+R Q D+N SS+R L + NA+L+ +
Sbjct: 1051 VSAREIAERQALLRQDINCDPHFNKLSSIRDNLNLTI-------------SNASLKEMVL 1097
Query: 989 RVPRTEEELLEINGIGKAKVSKY 1011
+P ++++ L++ GI K + +
Sbjct: 1098 LLPTSKKDFLKVGGITKDQAQDF 1120
>gi|451855559|gb|EMD68851.1| hypothetical protein COCSADRAFT_178603 [Cochliobolus sativus ND90Pr]
Length = 1787
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/539 (41%), Positives = 312/539 (57%), Gaps = 51/539 (9%)
Query: 373 WDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC 432
+FPW++ L + FG FRP Q E IN T++G FVLMPTGGGKSL YQLP++I
Sbjct: 844 MNFPWSQDLRTALIRRFGLRGFRPGQLETINTTLAGDHCFVLMPTGGGKSLCYQLPSVIA 903
Query: 433 PG----ITLVISPLVSLIQDQIMHLLQA-NIPATFLSGNMEWTEQQEILRELNS-DYCKY 486
G +TLV+SPL+SL++DQ+ Q + A ++G +++ I+ L D ++
Sbjct: 904 SGKTHGVTLVVSPLLSLMEDQVEACRQRFGMQAFLINGESTAAQKKMIMDGLRERDPQQF 963
Query: 487 -KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQ 545
++LYVTPE ++K+ ++ + L++ LARIVIDEAHCVSQWGHDFRPDY+ LG + +
Sbjct: 964 IQILYVTPEMLSKNQRMINAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKALGDVVR 1023
Query: 546 KFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY 605
+FP PVLALTATAT V+ DVV LG+ C F QSFNRPNL + A+ G+
Sbjct: 1024 QFPGVPVLALTATATKLVRSDVVSNLGIQGCREFSQSFNRPNLSYEVLPKAK----GIIN 1079
Query: 606 GHFFLLKEFYVVSL-------------------ECGHKAAFYHGSIDPAQRAFVQKQWSK 646
L+KE YV E G +A YH +D A R+ VQ++W K
Sbjct: 1080 NIADLIKERYVGKSGIIYCLSRKSCEQVAQKLSEMGIRAYHYHAGMDSADRSDVQRKWQK 1139
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+E ++I AT+AFGMGI+K DVR+VIHHSLPKS+EGY+QE GRAGRDG+RS C LYY Y+D
Sbjct: 1140 NEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLYYQYAD 1199
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQ 765
++ MI +G R + ++LR ++ YCEN DCRR
Sbjct: 1200 SRILRKMIDEG-----------------EGSREQKQRLSDMLRTVIQYCENKADCRRAQV 1242
Query: 766 LVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSH-ILEVFR 824
L +F E FD++ C TCDNC +F+ KD+T+ A ++LV + + H ++ FR
Sbjct: 1243 LGYFSEAFDASKCNSTCDNCRSDATFVTKDLTEYAAMAIKLVSRIHEDNVTMHQCVDAFR 1302
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVL 883
G+ +K + G GK L + + RI + L+ L E+ K + V G +S L
Sbjct: 1303 GAGGAKIKSAGLKEYGW-GYGKDLDRGDNERIFQQLLDAGDLKEKSKVNKV-GFATSYL 1359
>gi|402086461|gb|EJT81359.1| RecQ helicase MUSN [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1754
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/549 (40%), Positives = 310/549 (56%), Gaps = 46/549 (8%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----C 432
W+ + K F FR NQ E INAT+SG D FVLMPTGGGKSL YQLPA+I
Sbjct: 830 WSNDVRRALKDHFRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVIDTGNT 889
Query: 433 PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLL 489
G+T+V+SPL+SL+QDQI HL +I A SG+++ ++ IL L S +LL
Sbjct: 890 RGVTIVVSPLLSLMQDQIDHLKVLHILARQFSGDVDKAQRDMILDALRSSKNPENMVRLL 949
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE + KS L L+ + + + LARIVIDEAHCVSQWGHDFRPDY+ LG +++++P
Sbjct: 950 YVTPEMIGKSQAFLNALDKVYSNDKLARIVIDEAHCVSQWGHDFRPDYKTLGEVRRRYPK 1009
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD--------CEKVAERLQ- 600
PV+ALTATAT V D+ L + C IF QSFNRPNL+ D + +A+ +Q
Sbjct: 1010 VPVMALTATATPHVIVDIKLNLSIPQCEIFSQSFNRPNLFYDIRTKGKNIVQTIADLIQS 1069
Query: 601 -----VGLSYGHFFLLKEFYVVSL--ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
G+ Y E L + G A YH ++ ++ VQ++W +I ++
Sbjct: 1070 DHEGETGIVYTLSRKSAETIAKKLRDQSGISAHHYHAKMETEEKTDVQRKWQSGQIKVVV 1129
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFV+HH+LPKS+EGY+QE GRAGRDG +S C LY+ Y D ++ M
Sbjct: 1130 ATIAFGMGIDKPDVRFVVHHTLPKSLEGYYQETGRAGRDGGQSHCYLYFGYGDITSLRKM 1189
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I+ G Q + ++ L R++ +CE+ +CRR L +FGEKF
Sbjct: 1190 INDGEGNQE----------------QRDRQSQMLNRVIDFCEDKRECRRQSILRYFGEKF 1233
Query: 774 DSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKK 833
D A C KTCDNC F D T+TA +++++ +Q + +V G N
Sbjct: 1234 DPASCNKTCDNCRNGGHFELVDHTETAVAALQVIQAR-RQTTPKQCADVLLGRNN----P 1288
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
HE +GA K L + IL L E+ L EEV K G V++ + +AH
Sbjct: 1289 KDHERPEQYGAAKPLKEHVVLNILYRLTAEEAL-EEVNKPIKGGMVATYCHIG-PRAHEF 1346
Query: 894 IIGRQNVVL 902
+ G + + L
Sbjct: 1347 LSGARKLEL 1355
>gi|347800747|ref|NP_001007088.2| Bloom syndrome protein homolog [Gallus gallus]
Length = 1380
Score = 394 bits (1013), Expect = e-106, Method: Compositional matrix adjust.
Identities = 249/668 (37%), Positives = 363/668 (54%), Gaps = 83/668 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG HSFR NQ E INA + G D F+LMPTGGGKSL YQLPA + G+T+VISPL SLI D
Sbjct: 631 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 690
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L +I +T+L+G++ + + +L+ KLLYVTPEKV S+ LL LE+
Sbjct: 691 QVQKLKTLDIASTYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALEN 750
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L R+LLAR VIDEAHCVSQWGHDFR DY+ L +L++KF + P++ALTATA V++D+
Sbjct: 751 LYNRKLLARFVIDEAHCVSQWGHDFRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQ 810
Query: 569 QALGLVNCIIFRQSFNRPNLWMDC-----EKVAERLQVGLSYGHFFLLKEFYVVSL-ECG 622
L ++ +F SFNR NL D +KVA + H Y +S EC
Sbjct: 811 NQLEMLKPQVFTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECD 870
Query: 623 HKAAF----------YHGSIDPAQRAFVQKQWSKDE-INIICATVAFGMGINKPDVRFVI 671
AA YH + + R VQK+W E +ICAT+AFGMGI+KPDVR+VI
Sbjct: 871 TTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVI 930
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H SLPKSIEGY+QE GRAGRDG+ S C+L+YSYSD R++ +I S H R
Sbjct: 931 HASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNS-----HTR- 984
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK-FDSAHCKK----TCDNCS 786
+T+ NL MV YCEN VDCRR+ L +FGE F+ CK CDNCS
Sbjct: 985 ---------QTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPNFCKDHPEVICDNCS 1035
Query: 787 KIKSFIEKDVTDTAKKLVELVKL-TGQ-------------QFSSSHILEVFRGSLNQYVK 832
+ K + ++VTD K ++ V+ GQ +++ + ++++F G+ + ++
Sbjct: 1036 RKKDYKSRNVTDEVKSIIRFVQQHCGQVGGINGNRNTGSGRYTLNMMVDIFLGAKSAKIQ 1095
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ G G ++ R+ R LV++ L E++ + +V+ V V KA
Sbjct: 1096 S------GIFGKGAAYSRHNVERLFRKLVLDKILDEDLYITANDQAVAYV--VLGEKAQA 1147
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK 952
++ G V F N++ + K + K S + E+ +
Sbjct: 1148 VLNGLLQV--EFHETENASAIRKQRASVTKMSQ----------------REEMVKKCLGE 1189
Query: 953 LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
L + + L + V ++IF +TL+ +++ + E LL+I+G+ + K+ KYG
Sbjct: 1190 LTDTCKTLGKIF------DVHYFNIFSTSTLKKIAETLSSDAEVLLQIDGVTEDKLEKYG 1243
Query: 1013 VRLLETIE 1020
+++ ++
Sbjct: 1244 AEIIKVMD 1251
>gi|452005005|gb|EMD97461.1| hypothetical protein COCHEDRAFT_1220872 [Cochliobolus heterostrophus
C5]
Length = 1794
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/536 (41%), Positives = 313/536 (58%), Gaps = 47/536 (8%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
++PW++ L + FG FRP Q E IN T++G+ FVLMPTGGGKSL YQLP++I
Sbjct: 845 NYPWSQDLRTALIRRFGLRGFRPGQLETINTTLAGNHCFVLMPTGGGKSLCYQLPSVIAS 904
Query: 434 G----ITLVISPLVSLIQDQIMHLLQA-NIPATFLSGNMEWTEQQEILRELNS-DYCKY- 486
G +TLV+SPL+SL++DQ+ Q + A ++G +++ I+ L D ++
Sbjct: 905 GKTHGVTLVVSPLLSLMEDQVEACRQRFGMQAFLINGESTAAQKKMIMDGLRERDPQQFI 964
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
++LYVTPE ++K+ ++ + L++ LARIVIDEAHCVSQWGHDFRPDY+ LG + ++
Sbjct: 965 QILYVTPEMLSKNQRMISAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKALGDVVRQ 1024
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEK 594
FP PVLALTATAT V+ DVV LG+ C F QSFNRPNL + E
Sbjct: 1025 FPGVPVLALTATATKLVRSDVVSNLGIQGCQEFSQSFNRPNLSYEVLPKGKGIINSIAEL 1084
Query: 595 VAERLQVGLSYGHFFLLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEI 649
+ ER VG S G + L + + G +A YH +D A R+ VQ++W K+E
Sbjct: 1085 IKERY-VGKS-GIIYCLSRKSCEQVAQKLSDMGIRAYHYHAGMDSADRSEVQRKWQKNEY 1142
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
++I AT+AFGMGI+K DVR+VIHHSLPKS+EGY+QE GRAGRDG+RS C LYY Y+D
Sbjct: 1143 HVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLYYLYADSRI 1202
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVH 768
++ MI +G R + ++LR ++ YCEN DCRR L +
Sbjct: 1203 LRKMIDEG-----------------EGSREQKQRLSDMLRTVIQYCENKADCRRAQVLGY 1245
Query: 769 FGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSH-ILEVFRGSL 827
F E FD A C TCDNC +F+ KD+T+ A ++LV + + H ++ FRG+
Sbjct: 1246 FSEAFDPAKCNSTCDNCRSDATFVTKDLTEYAAMAIKLVNRIHEDNVTMHQCVDAFRGAG 1305
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVL 883
+K E G GK L + + RI + L+ L E+ K + V G +S L
Sbjct: 1306 GAKIKSAGLEEYGW-GYGKDLDRGDNERIFQQLLDAGDLKEKSKVNKV-GFATSYL 1359
>gi|310790854|gb|EFQ26387.1| RecQ family ATP-dependent DNA helicase [Glomerella graminicola
M1.001]
Length = 1602
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 295/508 (58%), Gaps = 49/508 (9%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG- 434
PW+ + K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA+I G
Sbjct: 696 PWSADVRKALKDRFRMRGFRSNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAIISSGK 755
Query: 435 ---ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELN--SDYCKYKLL 489
IT+V+SPL+SL+QDQ+ H+ NI A L+G ++ +I S +LL
Sbjct: 756 TRGITIVVSPLLSLMQDQVDHMSALNIQAVSLNGETNAQKRNQIFSSFKERSPELYIQLL 815
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE + S +R L +L + + LARIVIDEAHCVSQWGHDFRPDY+ LG L+ +FP
Sbjct: 816 YVTPEMLNNSQNFMRALTNLYSNKRLARIVIDEAHCVSQWGHDFRPDYKALGKLRHQFPT 875
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL---------- 599
P++ALTATAT +V D+ LG+ +C +F QSFNRPNL + + + L
Sbjct: 876 VPIIALTATATQNVIVDIKHNLGMDSCQVFSQSFNRPNLTYEVRRKEKELIHKIADLIMS 935
Query: 600 ----QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
Q G+ Y E L + KA+ YH + P R VQ++W D+I+++
Sbjct: 936 KYNGQCGIIYTLSRKTSEQVAEKLRSQYNIKASHYHAQMTPEDRIRVQREWQADKIHVVV 995
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG S C+L++ Y D +K M
Sbjct: 996 ATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAGRDGNPSDCILFFGYQDVATLKKM 1055
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I+ G ++ R++ L R+ ++C+N +CRR+ L +FGE F
Sbjct: 1056 IADGEGSET----------QKERQRIM------LNRVTAFCDNRENCRRVEILRYFGEVF 1099
Query: 774 DSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV----KLTGQQFSSSHILEVFRGSLNQ 829
++ C+KTCDNC F ++D ++ A+ ++ + +LT Q S + + ++ ++N
Sbjct: 1100 NADDCEKTCDNCRAGAVFEQQDFSELAQAAIQTIELHDRLTINQCSDILMGKKYQRTINP 1159
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRIL 857
+ HG K + K E RIL
Sbjct: 1160 HPDDP-------HGIAKGMKKHEIERIL 1180
>gi|367001388|ref|XP_003685429.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
gi|357523727|emb|CCE62995.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
Length = 1280
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/549 (38%), Positives = 316/549 (57%), Gaps = 40/549 (7%)
Query: 359 VNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTG 418
+N ND+ ++ FPW+ ++ K F +SFRPNQ E IN+T++G DVFVLMPTG
Sbjct: 512 INIESNINDRSDAALSFPWSSEVLFRLKNSFNLNSFRPNQLEAINSTLNGRDVFVLMPTG 571
Query: 419 GGKSLTYQLPALI----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQE 474
GGKSL YQLPA++ G T+VISPL+SL+ DQ+ HLL NI A+ +S ++++
Sbjct: 572 GGKSLCYQLPAIVKSGKTSGTTIVISPLISLMHDQVEHLLNINIKASMISSKSPAAQRKK 631
Query: 475 ILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFR 534
+ L+Y++PE ++ S R ++ L LARIV+DEAHCVS WGHDFR
Sbjct: 632 TFNLFINGLLD--LVYISPEMMSASQQCKRAIKRLYETNKLARIVVDEAHCVSNWGHDFR 689
Query: 535 PDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL------ 588
PDY+ L + K+++P P++ALTATA V+ D++ LG+ N ++ +QSFNR NL
Sbjct: 690 PDYKELKLFKREYPTIPLIALTATANEQVQLDIINNLGVRNPLLLKQSFNRTNLDYIIRT 749
Query: 589 --------WMDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGH-KAAFYHGSIDPAQRAF 639
K + Q G+ Y + + E + + AFYH + P++R
Sbjct: 750 KSKNTVNEICSSLKTDFKNQSGIIYCNSKISCEQVAQQIASQKIRTAFYHAGMTPSERLK 809
Query: 640 VQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCV 699
+QK W +++ +ICATVAFGMGI+KPDVRFVIH ++P+++EGY+QE GRAGRDG + C+
Sbjct: 810 IQKAWQNNQVQVICATVAFGMGIDKPDVRFVIHFTIPRTLEGYYQETGRAGRDGLPAQCI 869
Query: 700 LYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVD 759
Y+S+ D ++ MI + + N N + L E L ++VSYC+N
Sbjct: 870 TYFSFKDVRSLQTMIQRDKS-----------LNKENKLKHL----EKLQQVVSYCDNVTT 914
Query: 760 CRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI--EKDVTDTAKKLVELV-KLTGQQFSS 816
CRR L +F E D + C K CDNC +F E+DVT+ AK ++ L+ L ++ +
Sbjct: 915 CRRQQVLKYFNEDIDPSVCLKQCDNCRNSGNFSIEERDVTNEAKMIINLIGTLKDERVTR 974
Query: 817 SHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVY 876
+ ++F+GS + + + H + H AGKHL+K E RI LV L+EE +
Sbjct: 975 IYCQDIFKGSRSAKILQSGHNLIKDHAAGKHLSKLEIERIFSQLVTLR-LLEEYPIVNAS 1033
Query: 877 GSVSSVLKV 885
G S +K+
Sbjct: 1034 GFASHYIKL 1042
>gi|358679347|ref|NP_001240636.1| ATP-dependent DNA helicase Q1 [Sus scrofa]
Length = 649
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/534 (40%), Positives = 302/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + +F FRP Q E IN TMSG +VF++MPTGGGKSL
Sbjct: 63 SSPASWNKEDFPWSGKVKEVLQNIFKLQKFRPLQLETINVTMSGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI IDE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAIDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT+ V +D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNTSLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHANMEPEDKTTVHRRWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDTKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E + C K CDNC K SF K++T + LV+++K + L++
Sbjct: 460 QHFDEVWSPEECNKMCDNCCKDTSFERKNITAYCRDLVKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
L + K R + A L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 LGKGAAKLRVAGI----APPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|334348257|ref|XP_001365384.2| PREDICTED: ATP-dependent DNA helicase Q1 [Monodelphis domestica]
Length = 655
Score = 391 bits (1005), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/547 (40%), Positives = 312/547 (57%), Gaps = 48/547 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ + W+ DFPW++K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPESWNKQDFPWSEKVKDAMQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPA+ G TLVI PL+SL++DQ+M L Q + AT L+ + + + E+ +
Sbjct: 123 YQLPAVCSDGFTLVICPLISLMEDQLMVLEQLGVSATLLNASSTKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 KLKLIYVTPEKIAKSKMFMSRLEKAYEAGRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT V +D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNTSLIGLTATATNHVLKDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
V + + Q G+ Y E +SL+ G +A YH +++P + V K WS
Sbjct: 303 DVVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIQAGAYHANMEPKDKTKVHKNWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
++I ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LY + D
Sbjct: 363 NKIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDLKADCILYSGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCHNIHKCRRMLIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++SA C K CDNC K SF +K+VTD + L++++K + L++
Sbjct: 460 QHFDEVWNSAACNKMCDNCCKDISFEKKNVTDHCQDLIKILKQAEKLNEKLTPLKLIDAW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVN 886
L + K R + L + E +I+ H +++ +L E+ + Y ++ S LKV
Sbjct: 520 LGKGPAKLRVSDV----VPPKLPRDELEKIIAHFILQQYLKEDFSFT-AYATI-SYLKVG 573
Query: 887 QSKAHNL 893
KAH L
Sbjct: 574 -PKAHLL 579
>gi|380491813|emb|CCF35054.1| RecQ family ATP-dependent DNA helicase [Colletotrichum higginsianum]
Length = 1601
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/506 (41%), Positives = 290/506 (57%), Gaps = 47/506 (9%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG-- 434
W+ + K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA+I G
Sbjct: 692 WSADVRKALKDRFRMRGFRSNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAIISSGKT 751
Query: 435 --ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELN--SDYCKYKLLY 490
IT+V+SPL+SL+QDQ+ H+ NI A L+G ++ +I S +LLY
Sbjct: 752 RGITIVVSPLLSLMQDQVDHMSALNIQAVSLNGETNAQKRNQIFSSFKERSPELYIQLLY 811
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
VTPE + S +R L +L + LARIVIDEAHCVSQWGHDFRPDY+ LG L+ +FP
Sbjct: 812 VTPEMLNNSQNFMRALTNLYVNKRLARIVIDEAHCVSQWGHDFRPDYKALGKLRHQFPTV 871
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL----------- 599
P++ALTATAT +V D+ LG+ +C +F QSFNRPNL + + + L
Sbjct: 872 PIIALTATATQNVIVDIKHNLGMDSCQVFSQSFNRPNLTYEVRRKEKELIHKIADLIMSK 931
Query: 600 ---QVGLSYGHFFLLKEFYVVSL--ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICA 654
Q G+ Y E L + G KA YH + P R VQ++W D+I+++ A
Sbjct: 932 YDGQCGIIYTLSRKTSEQVAEKLRSQYGVKANHYHAQMTPEDRIRVQREWQADKIHVVVA 991
Query: 655 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI 714
T+AFGMGI+KPDVRFVIHHS+PKS+EGY+QE GRAGRDG S C+L++ Y D +K MI
Sbjct: 992 TIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAGRDGNPSDCILFFGYQDVATLKKMI 1051
Query: 715 SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLL--RMVSYCENDVDCRRLLQLVHFGEK 772
+ G G ++ + ++ R+ ++C+N +CRR+ L +FGE
Sbjct: 1052 ADG------------------EGSEVQKERQRIMLNRVTAFCDNRENCRRVEILRYFGEV 1093
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQ-YV 831
F+S C+KTCDNC F + D ++ A + ++L ++ + + E+ G Q +
Sbjct: 1094 FNSDDCEKTCDNCRAGAVFEQHDFSELANAAIRTIELH-ERLTINQCSEILMGKKYQRTI 1152
Query: 832 KKHRHETLSLHGAGKHLAKSEASRIL 857
H + HG K + K E RIL
Sbjct: 1153 DPHPDDP---HGIAKGMKKHEIERIL 1175
>gi|367043916|ref|XP_003652338.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
gi|346999600|gb|AEO66002.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
Length = 1637
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/520 (41%), Positives = 301/520 (57%), Gaps = 47/520 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW++ + K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA++
Sbjct: 687 YPWSEDVRRALKDRFRMTGFRHNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAMVNSG 746
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEIL---RELNSDYCKYK 487
GITLVISPL+SL+ DQ+ HL + NI AT +G++ + IL RE N ++ +
Sbjct: 747 KTRGITLVISPLLSLMNDQVAHLKRLNILATSFNGSINSELRNHILSVFREENPEHF-IQ 805
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLY TPE + S + +E+L ++ LARIVIDEAHCVS WGHDFRPDY+ LG + F
Sbjct: 806 LLYATPEMLTSSPAFRKGIETLYRKKKLARIVIDEAHCVSHWGHDFRPDYKALGQFRLAF 865
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL-------- 599
PV+ALTATAT++V D+ L + C +F QSFNRPNL+ + + R
Sbjct: 866 TGVPVMALTATATSNVIADIKHNLSMEGCEVFSQSFNRPNLYYEVIEKQTRFIQGMGEMI 925
Query: 600 ------QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +L H KA +YH +DP +A VQ++W + EI++
Sbjct: 926 TKKYPGQSGIVYTLSRKSAEGTASTLATKHGIKARYYHAMMDPESKAEVQRKWQEGEIHV 985
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ AT+AFGMGI+KPDVRFVIH +LPKS+EGY+QE GRAGRDGQ S C LY+SY D ++
Sbjct: 986 VVATIAFGMGIDKPDVRFVIHQNLPKSLEGYYQETGRAGRDGQPSDCYLYFSYGDVPALR 1045
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
MI++ + P + E L RMV+YCE+ CRR+ L +FGE
Sbjct: 1046 RMINEDKDK-----PKEEK----------ERQHAMLNRMVTYCESTHTCRRVQILQYFGE 1090
Query: 772 KFDSAHCKKTCDNCSKIK---SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLN 828
+FD+A C CDNC K + + +D TD A L+E V+ G + + ++E+ S N
Sbjct: 1091 RFDAAQCNDKCDNCRNGKKNGAAVLEDFTDCALALLEAVRELG-KVTLGKLVEIVTASKN 1149
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
+H+ ++ K + E R++ L E L +
Sbjct: 1150 ----VGKHQAIAGFARCKGMKNHEVQRVVMALHDEGALTD 1185
>gi|45383374|ref|NP_989724.1| ATP-dependent DNA helicase Q1 [Gallus gallus]
gi|23503565|dbj|BAC20377.1| RECQL1 protein [Gallus gallus]
Length = 661
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/556 (39%), Positives = 315/556 (56%), Gaps = 66/556 (11%)
Query: 347 VEREPFIPKIIKVNYIE----GSND-----QKWSSWDFPWTKKLEANNKKVFGNHSFRPN 397
++++ + K+IK + E GS + + W+ DFPW +K++ + F FR
Sbjct: 36 IQKKTMLKKMIKQSSGESAAGGSKETETSVEAWNRTDFPWYEKIKTALQNKFKLQKFRSL 95
Query: 398 QREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQAN 457
Q E +NATM+G D+F++MPTGGGKSL YQLPA+ G TLVI PL+SL++DQ+M L Q
Sbjct: 96 QLETVNATMAGKDIFLVMPTGGGKSLCYQLPAVCSDGFTLVICPLISLMEDQLMVLDQLG 155
Query: 458 IPATFLSGN-----MEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNAR 512
I AT L+ + ++W Q + R NS + KLLYVTPEK+AKS + + +LE
Sbjct: 156 ISATLLNASSSKEHVKWVHAQMLDR--NS---QLKLLYVTPEKIAKSKMFMSKLEKAYQA 210
Query: 513 ELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALG 572
LARI +DE HC SQWGHDFRPDY+ LGILK++FP P++ LTATAT V +D L
Sbjct: 211 GCLARIAVDEVHCCSQWGHDFRPDYKSLGILKRQFPCAPLIGLTATATNHVLKDAQNILH 270
Query: 573 LVNCIIFRQSFNRPNLWM--------------DCEKVAERLQVGLSYGHFFLL----KEF 614
+ CI F SFNRPNL+ D K+ GLS G + E
Sbjct: 271 IQKCITFTASFNRPNLYYEVRHKPSNNEDFIEDIVKLINGRYKGLS-GIVYCFSQKDSEQ 329
Query: 615 YVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
VSL+ G KA YH ++D + V K W+ ++I ++ ATVAFGMGI+KPDVRFVIHH
Sbjct: 330 VTVSLQKLGIKAGTYHANMDAKYKTKVHKGWAANQIQVVVATVAFGMGIDKPDVRFVIHH 389
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
S+ KS+E Y+QE GRAGRD Q++ C+LYY + D R+ M+ +
Sbjct: 390 SMSKSMENYYQESGRAGRDDQKADCILYYGFGDIFRISSMVV-----------------M 432
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
N G+ E L MVSYC+N CRR+L HF E ++SA+C + CDNC + S +
Sbjct: 433 ENVGQ------EKLYDMVSYCQNMNKCRRVLIACHFDEVWESANCNRMCDNCCRENSLEK 486
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
KD+T + L+++++ L++ + + K R ++ L + E
Sbjct: 487 KDITGYCRDLIKILEQADNMSEKLTPLKLIDAWSGKGLSKLRVAEVT----PPKLPREEL 542
Query: 854 SRILRHLVIEDFLMEE 869
RI+ HL+++ +L E+
Sbjct: 543 ERIIAHLLLQQYLRED 558
>gi|17366086|sp|Q9I920.1|BLM_CHICK RecName: Full=Bloom syndrome protein homolog; AltName: Full=RecQ
helicase homolog
gi|8567899|dbj|BAA96742.1| Gd BLM [Gallus gallus]
Length = 1142
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 249/668 (37%), Positives = 360/668 (53%), Gaps = 83/668 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG HSFR NQ E INA + G D F+LMPTGGGKSL YQLPA + G+T+VISPL SLI D
Sbjct: 393 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 452
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L +I AT+L+G++ + + +L+ KLLYVTPEKV S+ LL LE+
Sbjct: 453 QVQKLKTLDIAATYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALEN 512
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L R+LLAR VIDEAHCVSQWGHDFR DY+ L +L++KF + P++ALTATA V++D+
Sbjct: 513 LYDRKLLARFVIDEAHCVSQWGHDFRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQ 572
Query: 569 QALGLVNCIIFRQSFNRPNLWMDC-----EKVAERLQVGLSYGHFFLLKEFYVVSL-ECG 622
L ++ +F SFNR NL D +KVA + H Y +S EC
Sbjct: 573 NQLEMLKPQVFTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECD 632
Query: 623 HKAAF----------YHGSIDPAQRAFVQKQWSKDE-INIICATVAFGMGINKPDVRFVI 671
AA YH + + R VQK+W E +ICAT+AFGMGI+KPDVR+VI
Sbjct: 633 TTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVI 692
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H SLPKS+EGY+ E GRAGRDG+ S C+L+YSYSD R++ +I S H R
Sbjct: 693 HASLPKSVEGYYHESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNS-----HTR- 746
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK-FDSAHCKK----TCDNCS 786
+T+ NL MV YCEN VDCRR+ L +FGE F+ CK CDNCS
Sbjct: 747 ---------QTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPNFCKDHPEVICDNCS 797
Query: 787 KIKSFIEKDVTDTAKKLVELVKL-TGQ-------------QFSSSHILEVFRGSLNQYVK 832
K + ++VTD K ++ V+ GQ +++ + ++++F G+ + K
Sbjct: 798 TKKDYKSRNVTDEVKSIIRFVQQHCGQMGGINGNRNTGSGRYTLNMMVDIFLGA--ESAK 855
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
H + G G ++ R+ R L ++ L E++ + +V+ V V KA
Sbjct: 856 IHS----GIFGKGAAYSRHNVERLFRKLFLDKILDEDLYITANDQAVAYV--VLGEKAQA 909
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK 952
++ G V F N++ + K + K S + E+ +
Sbjct: 910 VLNGLLQV--EFHETENASAIRKQRASVTKMS----------------QREEMVKKCLGE 951
Query: 953 LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
L + + L + V ++IF +TL+ +++ + E LL+I+G+ + K+ KYG
Sbjct: 952 LTDTCKTLGKIF------DVHYFNIFSTSTLKKIAETLSSDAEVLLQIDGVTEDKLEKYG 1005
Query: 1013 VRLLETIE 1020
+++ ++
Sbjct: 1006 AEIIKVMD 1013
>gi|342879842|gb|EGU81076.1| hypothetical protein FOXB_08424 [Fusarium oxysporum Fo5176]
Length = 1668
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/518 (40%), Positives = 298/518 (57%), Gaps = 42/518 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ +++ K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 809 YPWSSEVQRMLKDRFRMKGFRCNQLEAINATLGGQDAFVLMPTGGGKSLCYQLPAVVKTG 868
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
G+T+V+SPL+SL+QDQ+ H+ I A +G +++++ N ++ +L
Sbjct: 869 KTRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGECSAEYKRQVMSAFNEKSPEHFLEL 928
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V+K+ LE+L+ + AR+VIDEAHCVSQWGHDFRPDY+ LG ++QK+P
Sbjct: 929 LYVTPEMVSKNVNFNSGLETLHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQKYP 988
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERL--- 599
PV+ALTATAT +V D+ LG+ NC IF QSFNRPNL+ + EKV + +
Sbjct: 989 GVPVMALTATATKNVIVDIRHNLGMDNCQIFSQSFNRPNLYYEVRPKTTNEKVMDAISSL 1048
Query: 600 -------QVGLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E SL G A FYH DP ++ VQ W + + +
Sbjct: 1049 IHSRYANQSGIVYTISRKNAEKVAESLSGNGITARFYHAGCDPQEKVEVQNSWQRGHVKV 1108
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ AT+AFGMGI+KPDVRFVIHH LPKS+EGY+QE GRAGRDG S C+L+Y +D +K
Sbjct: 1109 VVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGNPSDCILFYGKADIRVLK 1168
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
+I+ G H++ E L R+ ++C+N DCRR L +FGE
Sbjct: 1169 KLIADGDG-------SHDQ---------KERQMSMLNRVTAFCDNKSDCRRTEILRYFGE 1212
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
F +A C+K+CDNC +F ++D ++ A +++V+ + ++ ++ G +Y
Sbjct: 1213 DFSAAQCRKSCDNCKAGLTFEQQDFSEYAVAAIKVVQAQN-RITAVQCSDILLG--KKYP 1269
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ HG K L K E R++ L E E+
Sbjct: 1270 ANEAELSDEWHGMAKGLKKHELIRVIDKLSAEKAFNED 1307
>gi|346322515|gb|EGX92114.1| RecQ family helicase MusN [Cordyceps militaris CM01]
Length = 1700
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/469 (43%), Positives = 275/469 (58%), Gaps = 46/469 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
FPW+ +++ K F FR NQ E INAT+SG D FVLMPTGGGKSL YQLPA++
Sbjct: 799 FPWSPEVQRMLKDRFRMKGFRQNQLEAINATLSGQDAFVLMPTGGGKSLCYQLPAVVRTG 858
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
G+T+VISPL+SL+QDQ+ H+ I A +G +++++ ++ +L
Sbjct: 859 KTRGVTIVISPLLSLMQDQVDHMKALGIQAVAFNGECSAEYKRQVMNAFGERSPEHFIEL 918
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LY+TPE ++K+ L+ L AR+VIDEAHCVSQWGHDFRPDY+ LG ++KFP
Sbjct: 919 LYITPEMISKNMAFNAALQKLYQNGKFARLVIDEAHCVSQWGHDFRPDYKALGQARKKFP 978
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKVAER 598
N PV+ALTATAT +V D+ LG+ C +F QSFNRPNL+ + E +A+
Sbjct: 979 NVPVMALTATATQNVIVDIRHNLGMHTCKVFSQSFNRPNLFYEVRPKGTAASSIETIADL 1038
Query: 599 LQ------VGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ G+ Y E L E G A YH + P ++ VQK+W K ++ +
Sbjct: 1039 IHSHYAGLTGIVYALSRKGTENVAKKLGEAGISAYHYHAGMTPPEKVSVQKKWQKGDVKV 1098
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ AT+AFGMGI+KPDVRFVIHH LPKS+EGY+QE GRAGRDG+ S C+L Y D +K
Sbjct: 1099 VVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGKPSDCILLYGKRDITVLK 1158
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
MI+ G Q + + E L R+ S+C+N DCRR L +FGE
Sbjct: 1159 KMITDGEGNQ----------------QQKDRQMEMLNRVASFCDNQWDCRRTEVLRYFGE 1202
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV-------KLTGQQ 813
F +A C+K CDNC K F ++D +D A+ + ++ KLTG Q
Sbjct: 1203 DFSAAQCQKNCDNCQSGKVFEQRDFSDCARSAIRVIQLHEKRTKLTGSQ 1251
>gi|341891934|gb|EGT47869.1| hypothetical protein CAEBREN_30811 [Caenorhabditis brenneri]
Length = 978
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 246/681 (36%), Positives = 370/681 (54%), Gaps = 63/681 (9%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
++L + K FG + FR Q++ I +T+ GHD FVLMPTG GKSL YQLPA+I PG+T+V
Sbjct: 224 EELYSTLKSKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVV 283
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
+SPL SLI+DQ M + + I L+ ++ + +EI +L+S+ KLLYVTPEK++
Sbjct: 284 VSPLRSLIEDQKMKMKELGIGCEALTADLTASAHEEIYSDLSSENPTIKLLYVTPEKISA 343
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF--PNTPVLALT 556
S L +L+ R LLAR VIDEAHCVSQWGHDFRPDY L L++K+ P P++ALT
Sbjct: 344 SGRLSSVFYTLHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLNTLREKYNNPPVPIIALT 403
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL----------SYG 606
ATAT + D L + + +F SF R NL D A + V + G
Sbjct: 404 ATATPKIVTDARDHLKMQDSKLFISSFVRDNLKYDLIPKAAKSLVNVVEKMKQLYPGKSG 463
Query: 607 HFFLL--KEFYVVSL---ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
+ L KE V + + G A YH ++ R VQK W ++ ++ICAT+AFGMG
Sbjct: 464 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQKSWLANKFDVICATIAFGMG 523
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
I+KPDVRFVIH+SLPKSIEGY+QE GRAGRDG S C++ YSY D IR++ MI +G
Sbjct: 524 IDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEG---- 579
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC--- 778
N R + N N+L++V+YCEN CRR + + HFGE +D C
Sbjct: 580 ----------NTTTGVRSMHLN--NVLQVVAYCENVSVCRRKMLVEHFGEVYDEQSCRNS 627
Query: 779 KKTCDNCSKIKSFIEK----DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSL----NQY 830
K CD C + + +E DV+ A +++ + Q+ + +I E++RG+L ++
Sbjct: 628 KTPCDICERQRKNVEAIRLFDVSTDALSIIQCLPRM-QKATLKYISELYRGALIKKTSEQ 686
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
+ H L + G+ +++ +A R +R LVIE + E + + ++VL + A
Sbjct: 687 AVRMGHTKLPFYSKGQGMSEQDALRFVRKLVIEGLVHERL--YSIPNQTAAVL----AYA 740
Query: 891 HNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLS 950
G++ S + K+ VT + +G + S +T S+ Q + ++
Sbjct: 741 ELTEAGKE-----VASGRKAAKVYLHIVTCERKRKNAGLIELSNMNTVSEAQALKERHMV 795
Query: 951 ------AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIG 1004
K L L T + + AG Y I ++ ++ +PRT +LL I+ +
Sbjct: 796 KHGDVFTKCLQDLTQLITAVAESAGLS-GPYSILSREGIEQIAALLPRTNSDLLRIDSMT 854
Query: 1005 KAKVSKYGVRLLETIESTIKE 1025
+ K++KYG ++E + + K+
Sbjct: 855 QIKITKYGRLIMELLATYWKQ 875
>gi|123494887|ref|XP_001326616.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121909533|gb|EAY14393.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1447
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 242/669 (36%), Positives = 360/669 (53%), Gaps = 79/669 (11%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
K+ NKKVF + FR QR+ I A ++G DVFVLMPTGGGKSL YQLP I G+T+VI
Sbjct: 353 KINEVNKKVFKHSHFRGRQRDAIAAALNGEDVFVLMPTGGGKSLCYQLPGFIQMGVTIVI 412
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL+SLIQDQ+ L + + A + EI+R++N+ + + L++TPEK+
Sbjct: 413 SPLISLIQDQVRSLTELGLDAMAYGQETTAADYNEIVRKINN--GRLRFLFMTPEKIMMG 470
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
+ R + S+ ++ L R VID+AHCVSQWGHDFRPDY LG+LK +P+ P++ALTATA
Sbjct: 471 SINTRFIGSIYEKKRLTRFVIDKAHCVSQWGHDFRPDYTQLGVLKTMYPDIPIMALTATA 530
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL-----------SYGHF 608
T +V+ D+ + L + NC +F+ SFNRPN++ + + E + + S G
Sbjct: 531 TDAVQRDIKEILNIRNCHVFKSSFNRPNIFYEVIQKEENSKDEMIRWIKAHGYENSTGII 590
Query: 609 FLLKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
F + V+L G A+YHG ++ A R VQ+ W ++I +I AT+AFGMGI+
Sbjct: 591 FCMTTPETVNLSQYMNTKGFNTAYYHGKMENADRKKVQEMWMNNQIRVIVATLAFGMGID 650
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVR+VIH ++P+S+E Y+QE GRAGRDG++S C+L++S D RV +IS +E+
Sbjct: 651 KPDVRYVIHMTMPRSLEAYYQESGRAGRDGKQSHCLLFFSMGDKARVHRLISYTESEEQ- 709
Query: 724 FTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
+ N R LE ENLL M Y + CRR+L L +FGE+FD +C TC
Sbjct: 710 ---------IKNKDR-LEVE-ENLLEHMAEYGLDKTTCRRVLLLSYFGEQFDPDNCGMTC 758
Query: 783 DNCSKI---KSFIEKDVTDTAKKLVELVKLTGQQFSSS------HILEVFRGSLNQYVKK 833
DNC K ++ IE D+T K + LV ++ SS +I++V+ GS + V
Sbjct: 759 DNCQKQNLNRAKIEYDLTAHMKNIANLVNDINKKRKSSPYATTNYIIDVYVGSKAKKVTD 818
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
R L +G G L A +I H +++ L V K + + S V++ N
Sbjct: 819 SRDNNLPEYGLGVELRG--AKKIFIHQCLQELLRRNVLKMENHDSQYGVIEF-----FNA 871
Query: 894 IIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKL 953
G Q V I ++ ++G L SR D +
Sbjct: 872 SDGFQTKVQNLQPFI------YAEYVESEGDEL------SRED--------------MFI 905
Query: 954 YSSLRMLRTLLVKEAG-EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+ L +R L+++A E M + LQ ++K P+T EEL ++ + K ++ + G
Sbjct: 906 FKELVKMRDFLIQDANRESFMP-----STMLQLIAKIKPKTTEELKKMKVMNKGRMDRLG 960
Query: 1013 VRLLETIES 1021
+L + S
Sbjct: 961 HAILNVLNS 969
>gi|326912433|ref|XP_003202555.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Meleagris gallopavo]
Length = 661
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/526 (40%), Positives = 302/526 (57%), Gaps = 57/526 (10%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ W+ DFPW +K++ + F FR Q E +NATM+G D+F++MPTGGGKSL YQL
Sbjct: 66 EAWNKTDFPWYEKIKTALQNKFKLQKFRSLQLETVNATMAGKDIFLVMPTGGGKSLCYQL 125
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGN-----MEWTEQQEILRELNSD 482
PA+ G TLVI PL+SL++DQ+M L Q I AT L+ + ++W Q + R NS
Sbjct: 126 PAVCSDGFTLVICPLISLMEDQLMVLEQLGISATLLNASSSKEHVKWVHTQMLDR--NS- 182
Query: 483 YCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGI 542
+ KLLYVTPEK+AKS + + +LE LARI +DE HC SQWGHDFRPDY+ LGI
Sbjct: 183 --QLKLLYVTPEKIAKSKMFMSKLEKAYQAGCLARIAVDEVHCCSQWGHDFRPDYKSLGI 240
Query: 543 LKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM------------ 590
LK++FP P++ LTATAT V +D L + CI F SFNRPNL+
Sbjct: 241 LKRQFPLAPLIGLTATATNHVLKDAQNILHVQKCITFTASFNRPNLYYEVRHKPSNNEDF 300
Query: 591 --DCEKVAERLQVGLSYGHFFLL----KEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQ 643
D K+ GLS G + E +SL+ G KA YH ++D + V K
Sbjct: 301 IEDIVKIINGRYKGLS-GIVYCFSQKDSEQVTISLQKLGIKAGTYHANMDAKYKTKVHKG 359
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
W+ ++I ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD Q++ C+LYY
Sbjct: 360 WAANQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYG 419
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
+ D R+ M+ + N G+ E L MVSYC+N CRR+
Sbjct: 420 FGDIFRISSMVV-----------------MENVGQ------EKLYDMVSYCQNMNKCRRV 456
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVF 823
L HF E ++SA+C + CDNC + S +KD+T+ + L+++++ L++
Sbjct: 457 LIARHFDEVWESANCNRMCDNCCRENSLEQKDITEYCRDLIKILEQAENMSEKLTPLKLI 516
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + K R ++ L + E RI+ HL+++ +L E+
Sbjct: 517 DAWSGKGLSKLRVAEVT----PPKLPREELERIIAHLLLQQYLRED 558
>gi|290490728|dbj|BAI79324.1| RecQ1 helicae [Gallus gallus]
Length = 607
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/526 (40%), Positives = 299/526 (56%), Gaps = 57/526 (10%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ W+ DFPW +K++ + F FR Q E +NATM+G D+F++MPTGGGKSL YQL
Sbjct: 26 EAWNRTDFPWYEKIKTALQNKFKLQKFRSLQLETVNATMAGKDIFLVMPTGGGKSLCYQL 85
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGN-----MEWTEQQEILRELNSD 482
PA+ G TLVI PL+SL++DQ+M L Q I AT L+ + ++W Q + R
Sbjct: 86 PAVCSDGFTLVICPLISLMEDQLMVLDQLGISATLLNASSSKEHVKWVHAQMLDRS---- 141
Query: 483 YCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGI 542
+ KLLYVTPEK+AKS + + +LE LARI +DE HC SQWGHDFRPDY+ LGI
Sbjct: 142 -SQLKLLYVTPEKIAKSKMFMSKLEKAYQAGCLARIAVDEVHCCSQWGHDFRPDYKSLGI 200
Query: 543 LKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM------------ 590
LK++FP P++ LTATAT V +D L + CI F SFNRPNL+
Sbjct: 201 LKRQFPCAPLIGLTATATNHVLKDAQNILHIQKCITFTASFNRPNLYYEVRHKPSNNEDF 260
Query: 591 --DCEKVAERLQVGLSYGHFFLL----KEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQ 643
D K+ GLS G + E VSL+ G KA YH ++D + V K
Sbjct: 261 IEDIVKLINGRYKGLS-GIVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTKVHKG 319
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
W+ ++I ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD Q++ C+LYY
Sbjct: 320 WAANQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYG 379
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
+ D R+ M+ + N G+ E L MVSYC+N CRR+
Sbjct: 380 FGDIFRISSMVV-----------------MENVGQ------EKLYDMVSYCQNMNKCRRV 416
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVF 823
L HF E ++SA+C + CDNC + S +KD+T + L+++++ L++
Sbjct: 417 LIACHFDEVWESANCNRMCDNCCRENSLEKKDITGYCRDLIKILEQADNMSEKLTPLKLI 476
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + K R ++ L + E RI+ HL+++ +L E+
Sbjct: 477 DAWSGKGLSKLRVAEVT----PPKLPREELERIIAHLLLQQYLRED 518
>gi|398390493|ref|XP_003848707.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
gi|339468582|gb|EGP83683.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
Length = 1455
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 306/534 (57%), Gaps = 44/534 (8%)
Query: 366 NDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTY 425
+D + ++ FPW+ ++ K+ F FR NQ + INAT++G D FVLMPTGGGKSL Y
Sbjct: 567 SDLEKRNFSFPWSTDVKEALKEKFRLKGFRENQIDAINATLAGKDTFVLMPTGGGKSLCY 626
Query: 426 QLPALI----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS 481
QLPAL+ G+T+VISPLVSL++DQ+ HL + NI A ++ ++ ++ L S
Sbjct: 627 QLPALVRSGRTRGVTVVISPLVSLMEDQVQHLQKLNIQAFLVNSETTQDQRSALMDSLYS 686
Query: 482 DYCK--YKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQG 539
+ LLYVTPE +AKS ++ + L+ + LAR VIDEAHCVSQWGHDFRPDY+
Sbjct: 687 ADVENLVHLLYVTPEMLAKSTKMVSTFQWLHRKNRLARFVIDEAHCVSQWGHDFRPDYKL 746
Query: 540 LGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM--------- 590
LG ++ F PV+ALTATAT +V+ D + L + C +F SFNR NL+
Sbjct: 747 LGEFRRHFMGVPVMALTATATENVRADTIHNLSIEGCEVFTSSFNRRNLYYEVRKKAKGK 806
Query: 591 -DCEKVAERL------QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQ 641
D E +A + Q G+ Y E +L H KA YH + +++ VQ
Sbjct: 807 GDIESIANLIKEDHHKQTGIIYCFSRKDCEGMAEALRKQHSIKAHHYHAGLKSEEKSQVQ 866
Query: 642 KQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 701
K+W ++I AT+AFGMGI+K +VRFVIHH++PKS+EGY+QE GRAGRDG S+C L+
Sbjct: 867 KKWQAGTYHVIVATIAFGMGIDKGNVRFVIHHTIPKSLEGYYQETGRAGRDGLDSACYLF 926
Query: 702 YSYSDFIRVKHMISQGVAEQSPFTPG---HNRFNVANSGRVLETNTENLLRMVSYCENDV 758
Y Y D +V+ MI + + + H+ F + M+ +CEN
Sbjct: 927 YGYGDATKVRRMIDKDDENTTSWEQKQRQHHMFRL----------------MIQFCENKS 970
Query: 759 DCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSS 817
DCRR+ L +F E F+ C+ CDNC+ +F D T A++ +ELV+ + G + +
Sbjct: 971 DCRRVQVLRYFNEPFNKVDCEAKCDNCNSTSTFESVDFTQYARQAIELVRAVRGSKVTVL 1030
Query: 818 HILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
H ++VFRG+ N +K H + G G L++ + R+ L+ E+ + E+ +
Sbjct: 1031 HCVDVFRGAENAKIKSLGHNAIPQFGVGSDLSREDIERLFYRLLSEEAIREDTE 1084
>gi|395538504|ref|XP_003771219.1| PREDICTED: ATP-dependent DNA helicase Q1 [Sarcophilus harrisii]
Length = 780
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/547 (39%), Positives = 312/547 (57%), Gaps = 48/547 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ + W+ DFPW+ K++ + VF FR Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 189 SSPEGWNKEDFPWSGKIKDAMQNVFKLQKFRSLQLETINVTMAGKEVFLVMPTGGGKSLC 248
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPA+ G TLVI PL+SL++DQ+M L Q + AT L+ + + + E+ +
Sbjct: 249 YQLPAVCSDGFTLVICPLISLMEDQLMVLEQLGVSATLLNASSTKEHVKWVHAEMVNKNS 308
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 309 KLKLIYVTPEKIAKSKMFMSRLEKAYEAGRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 368
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT V +D + L + C F SFNRPNL+ + E
Sbjct: 369 RQFPNTSLIGLTATATNHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTDDFIE 428
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G +A YH +++P + V K+WS
Sbjct: 429 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPRDKTAVHKKWSA 488
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
++I ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LY + D
Sbjct: 489 NKIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDLKADCILYSGFGD 548
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC N CRR+L
Sbjct: 549 IFRISTMVV-----------------MENVGQ------QKLYEMVSYCHNMHKCRRMLIA 585
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++SA C K CDNC K SF +K+VTD + L++++K + L++
Sbjct: 586 QHFDEVWNSAACNKMCDNCCKDISFEKKNVTDYCRDLIKILKHAEKLNEKLTPLKLIDAW 645
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVN 886
+ + V K R + L + E +I+ H +++ +L E+ + Y ++ S LK+
Sbjct: 646 MGKGVAKLRVSDV----VSPKLPRDELEKIIVHFILQQYLKEDFSFT-AYATI-SYLKIG 699
Query: 887 QSKAHNL 893
KAH L
Sbjct: 700 -PKAHLL 705
>gi|224095634|ref|XP_002200254.1| PREDICTED: ATP-dependent DNA helicase Q1 [Taeniopygia guttata]
Length = 661
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/529 (40%), Positives = 301/529 (56%), Gaps = 50/529 (9%)
Query: 364 GSND-----QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTG 418
GS D ++W+ DFPW +K++A + F FR Q E +NA M+G D+F++MPTG
Sbjct: 57 GSKDTETSAEEWNKKDFPWYEKIKAALQSRFKLQKFRSLQLETVNAAMAGKDIFLVMPTG 116
Query: 419 GGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRE 478
GGKSL YQLPA+ G TLVI PL+SL++DQ+M L Q I A L+ + + + E
Sbjct: 117 GGKSLCYQLPAVCSDGFTLVICPLISLMEDQLMVLEQLGISAALLNASSSKEHVKWVHTE 176
Query: 479 LNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQ 538
+ + KL+YVTPEK+AKS + + +LE LARI +DE HC SQWGHDFRPDY+
Sbjct: 177 MLKRNSQLKLIYVTPEKIAKSKMFMSKLEKAYQAGCLARIAVDEVHCCSQWGHDFRPDYK 236
Query: 539 GLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------ 592
LGILK++FPNTP++ LTATAT V +D L + CI F SFNRPNL+ +
Sbjct: 237 SLGILKRQFPNTPLIGLTATATNHVLKDAQNILHVHKCITFTASFNRPNLYYEVRHKPSN 296
Query: 593 -----EKVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFV 640
E + + + G+ Y E VSL+ G KA YH ++D + V
Sbjct: 297 NEDFIEDIVKTINGRYKGMSGIVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTKV 356
Query: 641 QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVL 700
K W+ ++I ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD Q++ C+L
Sbjct: 357 HKGWATNQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCIL 416
Query: 701 YYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDC 760
YY + D R+ M+ + N G+ E L MVSYC+N C
Sbjct: 417 YYGFGDIFRISSMVV-----------------MENVGQ------EKLYDMVSYCQNMNKC 453
Query: 761 RRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHIL 820
RR+L HF E +DSA+C + CDNC + K + DVT L+++++ L
Sbjct: 454 RRVLIAHHFDEVWDSANCNRMCDNCCREKECEKMDVTGYCSDLIKILEQADSMSEKLTPL 513
Query: 821 EVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
++ + V K R ++ KH + E RI+ HL+++ +L E+
Sbjct: 514 KLIDAWSGKGVSKFRVPEVT---PPKH-TREELERIIAHLLLQQYLKED 558
>gi|397517493|ref|XP_003828945.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1 [Pan
paniscus]
Length = 649
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 301/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSGKVKDILQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F K++T+ + LV+++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDSAFERKNITEYCRDLVKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|332839802|ref|XP_520788.3| PREDICTED: ATP-dependent DNA helicase Q1 [Pan troglodytes]
gi|410267548|gb|JAA21740.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410267556|gb|JAA21744.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410267560|gb|JAA21746.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410304460|gb|JAA30830.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410304462|gb|JAA30831.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352515|gb|JAA42861.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352521|gb|JAA42864.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352523|gb|JAA42865.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352525|gb|JAA42866.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352527|gb|JAA42867.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
Length = 649
Score = 388 bits (997), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 301/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSGKVKDILQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F K++T+ + LV+++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDSAFERKNITEYCRDLVKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|255557667|ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative [Ricinus communis]
Length = 714
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 264/704 (37%), Positives = 367/704 (52%), Gaps = 99/704 (14%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
++D WS F W + + + VFG S+RPNQREI+NA MSG DV V+M GGGKSL
Sbjct: 69 ASDINWSG-PFEWDAQADRDKFHVFGITSYRPNQREIVNAVMSGRDVLVIMAAGGGKSLC 127
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPA++ G++LVISPL+SLIQDQ+M L IPA L+ +++ I + L
Sbjct: 128 YQLPAILRDGVSLVISPLISLIQDQVMGLKALGIPAYKLTSTTSKEDEKFIYKALEKGEE 187
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K+LYVTPEKV+KS + +LE + R L+ I IDEAHC SQWGHDFRPDY+ LGILK
Sbjct: 188 MLKILYVTPEKVSKSKRFMSKLEKCHHRGHLSIIAIDEAHCCSQWGHDFRPDYKNLGILK 247
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEK--------- 594
+FPN PVLALTATAT V+ D+++ L + C+ F + NRPNL +M EK
Sbjct: 248 IQFPNVPVLALTATATQKVQYDLMEMLHIPKCVRFVSTVNRPNLFYMVREKSSVGKVVID 307
Query: 595 -VAERL-------QVGLSYGHFFLLKEFYVVSL---ECGHKAAFYHGSIDPAQRAFVQKQ 643
+AE + + G+ Y F KE V+ E G A +YH +D R V +
Sbjct: 308 EIAEFIRESYPNNESGIVY--CFSRKECEQVAADLRERGISADYYHADMDVNAREKVHMR 365
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
WS++++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S CVL++
Sbjct: 366 WSQNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGAPSECVLFFR 425
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
D R M+ NSG +NL +V YC++ CRR
Sbjct: 426 PGDVPRQSSMVF-----------------YENSG------LQNLYDIVRYCQSKRTCRRS 462
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVF 823
HF E C CDNC+ +E DVT AK +V L++ +L++
Sbjct: 463 AFFRHFSEPLQD--CNGMCDNCAFSNEVMEVDVTSHAKTMVSLLQDMHDNDQRLTMLQLV 520
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVL 883
K++H+ L G L + E +++ L++++ EE + + Y + + V
Sbjct: 521 DKV------KNKHKEL-----GADLKREEIEQLVIQLILDNVFKEEFQHT-AYATNAYV- 567
Query: 884 KVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQN 943
A ++ GR+ V L + N GK++ ++
Sbjct: 568 -KTGPLAKQVLQGRKIVKLEISNKQNK----------------DGKMNKAKR-------- 602
Query: 944 EVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGI 1003
L LS L L LR L E EG++ + + + + +S + P + EEL +I I
Sbjct: 603 --SLMLSG-LEFKLDKLRKELSAEH-EGILPHSVLSSQQMSMISAQKPNSTEELEKI--I 656
Query: 1004 GKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRR 1047
GK K +YG R+LE IK+F N S + ND G +RR
Sbjct: 657 GKLKTERYGNRILE----EIKKF--AGSNESDNGILNDEGSKRR 694
>gi|22651415|gb|AAL05260.1| QDE3-like protein [Blumeria graminis]
Length = 1632
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/572 (37%), Positives = 334/572 (58%), Gaps = 48/572 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+K ++ K+ F FR +Q E INAT++G D F+LMPTGGGKSL YQLPA++
Sbjct: 782 PWSKDVKKMLKERFKLKGFRHHQLEAINATLNGEDAFILMPTGGGKSLCYQLPAVVQSGK 841
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK--YKLL 489
G+T+V+SPL+SL+ DQ+ HL + +I A ++G+ + E++EI+ L + + +LL
Sbjct: 842 TKGVTIVVSPLLSLMHDQVEHLRKNSIQAATINGDTDSAERREIMNNLRQQHPEQHIQLL 901
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V++S + L SLN R LAR VIDEAHCVSQWGHDFR +Y L L++ FP+
Sbjct: 902 YVTPEMVSQSGQMGDILSSLNQRSKLARFVIDEAHCVSQWGHDFRKEYIALSRLRKDFPS 961
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------------EKVAE 597
P++ALTATAT +VK DV+ LG+ IF QSFNRPNL+ + +++A+
Sbjct: 962 VPIMALTATATENVKNDVISNLGMGKPPIFSQSFNRPNLYYEVRPKSGRKMPELLKEIAD 1021
Query: 598 ------RLQVGLSY-----GHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSK 646
R Q G+ Y G + K+ +S E +YH + ++ V + W
Sbjct: 1022 LVTRKYRGQTGIIYTLSRKGCEDMAKK---LSKEFNISVHYYHAGMKSEEKTKVTRDWQS 1078
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
++ ++ AT+AFGMGI+KPDVRFVIH+++PKS+EGY+QE GRAGRDG++S C LYYS+ D
Sbjct: 1079 GKLQVVVATIAFGMGIDKPDVRFVIHYTIPKSLEGYYQETGRAGRDGKKSGCYLYYSWGD 1138
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
+ ++ I + + N S E L M+ YC+N DCRR+ L
Sbjct: 1139 TVMLRKFIFESDTK-----------NDQKSTDQKEREWAMLQTMIGYCDNRADCRRMQVL 1187
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRG 825
+FGE F +C+ +CDNCS + K+ T+ +K + +V+ + + + + +E+ +G
Sbjct: 1188 RYFGETFSKDNCRHSCDNCSSGILYESKNFTNCSKFAMGIVRHMKSHKATVLNCVELLQG 1247
Query: 826 SLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKV 885
+ + K E G+ K +++ + R++ L++E+ L+EE +V S +++
Sbjct: 1248 KKTKSLSKFNAENFEEFGSCKEVSRGDLERVMYRLILENALVEE-SVVNVGNFTSQYIRL 1306
Query: 886 NQSKAHNLIIGRQNVVLRFPSAINSTKLSKSD 917
+ + + + GR+ V L P + S K S +D
Sbjct: 1307 GPN-SRDFMTGRRKVHLDVP--VESVKYSTTD 1335
>gi|403215321|emb|CCK69820.1| hypothetical protein KNAG_0D00680 [Kazachstania naganishii CBS
8797]
Length = 881
Score = 388 bits (996), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/545 (40%), Positives = 311/545 (57%), Gaps = 53/545 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+ WT +L + + F FRPNQ IN+ +SG DVFVLMPTGGGKSL YQLPAL+
Sbjct: 214 YRWTDELYYHLQATFKLKGFRPNQLTAINSVLSGKDVFVLMPTGGGKSLCYQLPALVKSG 273
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYCKYKLL 489
G T+VISPL+SL+QDQ+ HLL NI A + ++ E+ L N D L+
Sbjct: 274 ETRGTTVVISPLISLMQDQVEHLLDLNIRACMFNSKNSAAQRNEVFNLLINGDL---DLI 330
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
Y++PE + S R L +L LARIVIDEAHCVS WGHDFRPDY+ L K ++P
Sbjct: 331 YMSPEMIKASAQCQRALGTLYKNRQLARIVIDEAHCVSNWGHDFRPDYKQLSYFKMQYPE 390
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW---------------MDCEK 594
PV+ALTATA V+ D++ L L + + RQSFNR NL+ ++ K
Sbjct: 391 IPVIALTATANKQVQSDIINNLRLKSAVQLRQSFNRDNLFYQSIPKNNKTSIPLIVNSLK 450
Query: 595 VAERLQVGLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
R Q G+ Y H + E L+ G FYH +D R VQ+ W ++I +I
Sbjct: 451 TVFRGQSGIIYCHSKIACEKLTALLKKEGINCRFYHAGMDTTDRELVQRGWQANQIQVII 510
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+K DVRFV H+++P+++E Y+QE GRAGRDG+ S C+ +YS++D ++ M
Sbjct: 511 ATIAFGMGIDKSDVRFVFHYTVPRTLENYYQETGRAGRDGKFSYCITFYSFADIRTLQKM 570
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I + + + +N + L ENL +++++C+N +DCRR L L +F E F
Sbjct: 571 IQR-----------DRKLDKSNKLKQL----ENLQQVMNFCDNMIDCRRKLILSYFNESF 615
Query: 774 DSAHCKKTCDNCSK--IKSFI----------EKDVTDTAKKLVELVK-LTGQQFSSSHIL 820
D C CDNC+K KS EKD+TD A ++VELV+ + + ++S+
Sbjct: 616 DVKDCNNNCDNCAKQHFKSETDGSNTNVEDEEKDITDIALRIVELVRSIQDEVVTTSYCQ 675
Query: 821 EVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+VF+GS + + H L HG GK L K + +I HL+ L +E K++ G VS
Sbjct: 676 DVFKGSNMLKIVQANHHMLPEHGTGKSLRKVDIEKIFFHLITLRIL-QEYSKTNGLGFVS 734
Query: 881 SVLKV 885
+ +KV
Sbjct: 735 NYVKV 739
>gi|332232887|ref|XP_003265634.1| PREDICTED: ATP-dependent DNA helicase Q1 [Nomascus leucogenys]
Length = 649
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/529 (39%), Positives = 299/529 (56%), Gaps = 46/529 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
++ LTATAT V D + L + C F SFNRPNL+ + E + +
Sbjct: 248 ASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKL 307
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ Q G+ Y E VSL+ G A YH +++P + V ++WS +EI +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
++S C K CDNC K +F K++T+ + L++++K + L++ + +
Sbjct: 465 VWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 525 AKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|30584589|gb|AAP36547.1| Homo sapiens RecQ protein-like (DNA helicase Q1-like) [synthetic
construct]
gi|61369219|gb|AAX43302.1| RecQ protein-like [synthetic construct]
Length = 650
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 301/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F K++T+ + L++++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|531243|dbj|BAA07200.1| DNA helicase Q1 [Homo sapiens]
Length = 649
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 301/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F K++T+ + L++++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|12654453|gb|AAH01052.1| RecQ protein-like (DNA helicase Q1-like) [Homo sapiens]
gi|30583077|gb|AAP35783.1| RecQ protein-like (DNA helicase Q1-like) [Homo sapiens]
gi|61359045|gb|AAX41660.1| RecQ protein-like [synthetic construct]
Length = 649
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 301/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F K++T+ + L++++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|14591902|ref|NP_116559.1| ATP-dependent DNA helicase Q1 [Homo sapiens]
gi|14591904|ref|NP_002898.2| ATP-dependent DNA helicase Q1 [Homo sapiens]
gi|218512113|sp|P46063.3|RECQ1_HUMAN RecName: Full=ATP-dependent DNA helicase Q1; AltName: Full=DNA
helicase, RecQ-like type 1; Short=RecQ1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|119616840|gb|EAW96434.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616841|gb|EAW96435.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616842|gb|EAW96436.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616843|gb|EAW96437.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616844|gb|EAW96438.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|158256686|dbj|BAF84316.1| unnamed protein product [Homo sapiens]
gi|261858616|dbj|BAI45830.1| RecQ protein-like [synthetic construct]
Length = 649
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 301/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F K++T+ + L++++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|386812206|ref|ZP_10099431.1| DNA helicase RecQ [planctomycete KSU-1]
gi|386404476|dbj|GAB62312.1| DNA helicase RecQ [planctomycete KSU-1]
Length = 714
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/654 (36%), Positives = 365/654 (55%), Gaps = 82/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+K FG SF P Q +II ++ D FVLMPTGGGKSL YQLPAL+ G+T+V+SPL++L
Sbjct: 6 QKYFGYTSFYPLQEDIIKEVLAQRDAFVLMPTGGGKSLCYQLPALLFSGVTIVVSPLIAL 65
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL IPA F++ ++ ++E + L ++ + K+LY+ PE++ + L+
Sbjct: 66 MKDQVDGLLANGIPAIFINSSLSYSEIDAKRQSLLNN--EIKILYIAPERLFMPE-FLQF 122
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L ++ IDE+HC+S+WGHDFRP+Y+ L ILK+KFP PV+ALTATAT +V++
Sbjct: 123 LQGLK----ISLFAIDESHCISEWGHDFRPEYRQLEILKEKFPKVPVMALTATATPAVQK 178
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCE-------KVAERLQV-----GLSYGHFFLLKE 613
D++ L L +C IF+ SFNR NL+ + ++ L+ G+ Y E
Sbjct: 179 DIILQLKLSDCRIFKASFNRKNLYYQIKPKDNPYHQILHYLKSRKKDSGIIYCQSRKTVE 238
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL+ G++ YH + R Q+++ D++ II AT+AFGMGI+KPDVR+VIH
Sbjct: 239 SLTTSLQAEGYRVLPYHAGLPAEVRTENQERFIHDDVEIIVATIAFGMGIDKPDVRYVIH 298
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LPKSIEGY+QE GRAGRDG +S C+L +SY+D ++++ I Q + E
Sbjct: 299 YDLPKSIEGYYQETGRAGRDGLKSDCILLFSYADKFKIEYFIHQKIDENEKLIA------ 352
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L + +YCE ++ CRR L L +FGEKFD +C CD C + K
Sbjct: 353 -----------YKQLRHLTNYCEGNI-CRRKLLLDYFGEKFDEPNC-NNCDVCLEPKERF 399
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K++ + G++F ++I++V +GS NQ V ++RH+T+ +G GK KS+
Sbjct: 400 --DGTIAAQKILSCIYRVGERFGVNYIIDVLQGSKNQKVLQNRHDTIKTYGVGKEYTKSQ 457
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
R L+ ++ K D G VL++N+ Q V+LR
Sbjct: 458 WQAFTRELIQLGYI-----KLD--GDKYPVLRLNEKS--------QKVLLR--------- 493
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQ-PQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ K+ ++ + P P++E D + L+ LR LR L + E
Sbjct: 494 --------------NEKVFLTKPEEPLHIPKDERDGDYDRTLFERLRNLRKTLADK--EF 537
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
V Y IF + +L+ +S P+ +L +INGIG+ K+ KYG L+ I K+
Sbjct: 538 VPPYIIFHDTSLKEMSICYPQNLPDLRKINGIGEQKLHKYGEIFLKEITDYCKQ 591
>gi|367019938|ref|XP_003659254.1| hypothetical protein MYCTH_2296042 [Myceliophthora thermophila ATCC
42464]
gi|347006521|gb|AEO54009.1| hypothetical protein MYCTH_2296042 [Myceliophthora thermophila ATCC
42464]
Length = 1843
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/521 (41%), Positives = 297/521 (57%), Gaps = 48/521 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
FPW+ + K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA++
Sbjct: 896 FPWSADVRRALKDRFRMTGFRHNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAMVNSG 955
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
G+TLV+SPL+SL+ DQ+ HL + NI A +G + + IL + + ++ +L
Sbjct: 956 KTRGVTLVVSPLLSLMNDQVAHLKRLNILAATFNGTISAALRNHILGAFHQPHPEHHIQL 1015
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE + S ++ L + LARIVIDEAHCVS WGHDFRPDY+ LG ++ FP
Sbjct: 1016 LYVTPEMLTNSPAFRNGVQLLYRKNKLARIVIDEAHCVSHWGHDFRPDYKALGEFRRGFP 1075
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------------EKVA 596
PV+ALTATAT +V D+ L + NC +F QSFNRPN++ E +
Sbjct: 1076 GVPVMALTATATKNVMADIKHNLDMENCEVFTQSFNRPNIYYQVIYKQSRFIRGMGELIN 1135
Query: 597 ERL--QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
ER Q G+ Y E +L H KA +YH +DP + VQ+QW EI+++
Sbjct: 1136 ERFPGQCGIVYTLSRKSAEGTAQALVSKHGIKARYYHAQMDPESKLEVQEQWQAGEIHVV 1195
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+LY++Y D ++
Sbjct: 1196 VATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRAGRDGKPSECILYFAYHDIPALRR 1255
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
MI++ + ++ L RMV+YCE CRR+ L +FGE+
Sbjct: 1256 MINEDKDKDKDEKERQHQM---------------LNRMVNYCETSHTCRRVQILRYFGER 1300
Query: 773 FDSAHCKKTCDNCSKIKSFIE----KDVTDTAKKLVELVKLTGQ-QFSSSHILEVFRGSL 827
FD+A C CDNC+ + E +D T+ A L L + GQ Q + ++E+ GS
Sbjct: 1301 FDAADCNNMCDNCANGSTNEEPPVMEDFTECAVAL--LTAVEGQKQVTLGKLVEIVTGSK 1358
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
N V KH + L G + E R++ L ED L++
Sbjct: 1359 N--VGKHTNAPGFLLCKG--MKNHEVQRVVMALHDEDALVD 1395
>gi|197100975|ref|NP_001124706.1| ATP-dependent DNA helicase Q1 [Pongo abelii]
gi|75070978|sp|Q5RF63.1|RECQ1_PONAB RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|55725460|emb|CAH89594.1| hypothetical protein [Pongo abelii]
Length = 649
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 299/534 (55%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGK L
Sbjct: 63 SSPAAWNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKGLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLRNLGIHAGAYHANLEPEDKTTVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRRLL
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRLLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F K++T+ + L++++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|411116551|ref|ZP_11389038.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
gi|410712654|gb|EKQ70155.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
Length = 741
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 247/660 (37%), Positives = 360/660 (54%), Gaps = 81/660 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE+ K FG SFRP QR+II + D+ V+MPTGGGKSL YQLPAL+ PG+T+V+S
Sbjct: 14 LESALKHYFGYDSFRPGQRQIIEKALQNQDLLVVMPTGGGKSLCYQLPALLKPGLTVVVS 73
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L IPATFL+ ++ TE +E RE + KL+Y+ PE++
Sbjct: 74 PLIALMQDQVQALQDNGIPATFLNSSLSGTELRE--RERAILDGEMKLVYIAPERLLNEG 131
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L + +A I IDEAHCVS+WGHDFRP+Y+ L L+Q F N P++ALTATAT
Sbjct: 132 RLAGWLSQV----YVAAIAIDEAHCVSEWGHDFRPEYRQLSQLRQWFANVPIMALTATAT 187
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE----------RLQVGLSYGHFFL 610
V+ D+++ L L + ++ +FNRPNL+ + + R Q G S G +
Sbjct: 188 ERVRYDIIEQLNLQDPVLHVSTFNRPNLYYEVRPKHKQSYRELLQLIRQQAGAS-GIIYC 246
Query: 611 LKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKP 665
L V L G A YH +D R+ Q ++ +D + ++ AT+AFGMGINKP
Sbjct: 247 LSRKRVDELTTKLQRDGISALPYHAGMDNQLRSENQSRFIRDNVQVMVATIAFGMGINKP 306
Query: 666 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFT 725
DVRFV+H+ LP++IEGY+QE GRAGRDG+ + C L++S D V+ +ISQ V
Sbjct: 307 DVRFVVHYDLPRNIEGYYQESGRAGRDGEPARCTLFFSMGDVKTVEFLISQKVD------ 360
Query: 726 PGHNRFNVANSGRVLE----TNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
N+G LE T+ L R+++Y E +CRR++QL +FGE F S +C
Sbjct: 361 --------PNTGEPLEDEQRIATQQLRRVINYAEA-TECRRIIQLGYFGETF-SGNC-GN 409
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CDNC + K +D T A+K + V ++F +++++V RGS NQ + ++ H+ LS
Sbjct: 410 CDNCLQPKPV--EDWTIEAQKFLSCVARVKERFGMNYVIDVLRGSRNQRLLQNGHDKLST 467
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+G GK + E R+L +I L+EE SD Y SVL++NQ V
Sbjct: 468 YGIGKDHSADEW-RMLGRSLIHQGLVEET--SDGY----SVLRLNQMSWE---------V 511
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
LR K ++ + P T S + + +L+ L+ LR
Sbjct: 512 LR------------------KQRTVAIAVPPKPTATSSNQPISTNSQIVTELFQRLQKLR 553
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
L E + V Y IF N +LQ +++R P + I+G+G K+S+YG L I +
Sbjct: 554 KQLADE--QSVPPYVIFQNTSLQEMAERQPLNSRDFAAISGVGSRKLSQYGEVFLAEIRA 611
>gi|431908388|gb|ELK11985.1| ATP-dependent DNA helicase Q1 [Pteropus alecto]
Length = 1213
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/542 (39%), Positives = 308/542 (56%), Gaps = 46/542 (8%)
Query: 357 IKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMP 416
+K + + S+ W+ DFPW+ K++ + VF FR Q E IN TMSG D+F++MP
Sbjct: 621 VKSSECDSSSPASWNKEDFPWSDKVKDVLQNVFKLEMFRLLQLETINVTMSGKDIFLVMP 680
Query: 417 TGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEIL 476
TGGGKSL YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + +
Sbjct: 681 TGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLEISATMLNASSSKEHVKWVH 740
Query: 477 RELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPD 536
E+ + K KL+YVTPEK+AKS + + +LE + L RI +DE HC SQWGHDFRPD
Sbjct: 741 AEMVNKNSKLKLIYVTPEKIAKSKMFMSRLEKAYEAKRLTRIAVDEVHCCSQWGHDFRPD 800
Query: 537 YQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC---- 592
Y+ LGILK++FPNT ++ LTATAT V +D + L + C+ F SFNRPNL+ +
Sbjct: 801 YKALGILKRQFPNTALIGLTATATNHVLKDAQKILCIEKCLTFTASFNRPNLYYEVRQKP 860
Query: 593 -------EKVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRA 638
E + + + Q G+ Y E VSL+ G A YH +++P +
Sbjct: 861 SNTEDFIEDIVKLINGRYNGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHANMEPEDKT 920
Query: 639 FVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSC 698
V ++WS +EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C
Sbjct: 921 KVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADC 980
Query: 699 VLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDV 758
+LYY + D R+ M+ + N G+ + L MVSYC+N
Sbjct: 981 ILYYGFGDIFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNIS 1017
Query: 759 DCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSH 818
CRR+L HF E ++S C K CDNC K SF K+VT + L+++++ +
Sbjct: 1018 KCRRVLIAQHFDEVWNSEACNKMCDNCCKDISFERKNVTTYCRDLIKILQQAEEMNEKLT 1077
Query: 819 ILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGS 878
L++ + K R + A L + + +I+ H +++ +L E+ + Y +
Sbjct: 1078 PLKLIDSWTGKGASKLRVAGV----APPELPREDLEKIIAHFLLQQYLKEDYSFT-AYAT 1132
Query: 879 VS 880
+S
Sbjct: 1133 IS 1134
>gi|403269130|ref|XP_003926609.1| PREDICTED: ATP-dependent DNA helicase Q1 [Saimiri boliviensis
boliviensis]
Length = 649
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 301/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ D+PW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDYPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCLDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRPNLYYEVRQKPPNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANMEPEDKTKVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K SF K+VT+ + L++++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDISFERKNVTEYCRDLIKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|302414652|ref|XP_003005158.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
gi|261356227|gb|EEY18655.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
Length = 1714
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 293/521 (56%), Gaps = 52/521 (9%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG-- 434
W++ + K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA++ G
Sbjct: 804 WSEDVTKALKDRFRMRGFRTNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAVVTSGKT 863
Query: 435 --ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYKLLY 490
IT+V+SPL+SL+QDQ+ HL I A S ++ ++EIL +NS Y ++ +LY
Sbjct: 864 KGITVVVSPLLSLMQDQVDHLTALGIKAKAFSSAIQAPARREILEFMNSPYPDHQFTMLY 923
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
V+PE + S R L ++ + LAR V+DEAHCVSQWGHDFRPDY+ L L+ +P+
Sbjct: 924 VSPEMLNASAQFERALTNVYRNQKLARFVVDEAHCVSQWGHDFRPDYKDLFKLRSNYPSV 983
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL----------- 599
P++ALTATAT +V D+ L + C +F QSFNRPNL E+ + L
Sbjct: 984 PIIALTATATTNVIVDIQHNLQIDKCQVFTQSFNRPNLTYAVERKEKGLIETIAQLIQSK 1043
Query: 600 ---QVGLSYGHFFLLKEFYVVSLE--CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICA 654
Q G+ Y E L G A+ YH ++ P ++ VQ++W K I ++ A
Sbjct: 1044 YNNQTGIIYVLSRKNTEDVATKLRDNYGISASHYHAAMKPEEKWNVQRRWQKGSIKVVVA 1103
Query: 655 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI 714
T+AFGMGI+KPDVRFVIHHSLPKS+EGY+QE GRAGRDG+ S C+LY+ Y D +K MI
Sbjct: 1104 TIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKPSDCILYFGYGDVFTLKKMI 1163
Query: 715 SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD 774
+ G S E L RM +YC++ DCRR+ L +FGE F+
Sbjct: 1164 NDG----------------DGSEEQKERQRGMLNRMSTYCDDQKDCRRVTILRYFGEAFN 1207
Query: 775 SAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKH 834
A C KTCDNC F E+D ++ A ++E +K +H + + K
Sbjct: 1208 VADCNKTCDNCLHKGVFEERDFSEFAIAVIETIK--------AHKYLTINQCADILLGKK 1259
Query: 835 RHETLSL-----HGAGK-HLAKSEASRILRHLVIEDFLMEE 869
R +T+ HG K LAK E R++ L+ E L EE
Sbjct: 1260 RPKTIDDNLDDNHGLIKGRLAKHEIERLVDKLLAESALREE 1300
>gi|151568124|pdb|2V1X|A Chain A, Crystal Structure Of Human Recq-Like Dna Helicase
gi|151568125|pdb|2V1X|B Chain B, Crystal Structure Of Human Recq-Like Dna Helicase
gi|282403581|pdb|2WWY|A Chain A, Structure Of Human Recq-Like Helicase In Complex With A
Dna Substrate
gi|282403582|pdb|2WWY|B Chain B, Structure Of Human Recq-Like Helicase In Complex With A
Dna Substrate
Length = 591
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 301/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 16 SSPAAWNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 75
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 76 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 135
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 136 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 195
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 196 RQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 255
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 256 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 315
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 316 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 375
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 376 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMA 412
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F K++T+ + L++++K + L++
Sbjct: 413 QHFDEVWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSW 472
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 473 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 521
>gi|308452165|ref|XP_003088938.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
gi|308244257|gb|EFO88209.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
Length = 1020
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 250/683 (36%), Positives = 371/683 (54%), Gaps = 67/683 (9%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
++L + K FG + FR Q++ I +T+ G+D FVLMPTG GKSL YQLPA+I PG+T+V
Sbjct: 267 EELYSTLKSKFGFNQFRHRQKQCILSTLMGNDTFVLMPTGAGKSLCYQLPAVILPGVTVV 326
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
+SPL SLI+DQ M + + I L+ ++ Q++I +L S+ KLLYVTPEK++
Sbjct: 327 VSPLRSLIEDQKMKMKELGIGCEALTADLSAGAQEDIYSDLTSENPTIKLLYVTPEKISA 386
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF--PNTPVLALT 556
S L+ +L+ R LLAR VIDEAHCVSQWGHDFRPDY L L++KF P P++ALT
Sbjct: 387 SGRLISVFYTLHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLSTLREKFHNPPVPIIALT 446
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAERLQVGLS 604
ATAT + D L + N +F SF R NL D EK+ ++L G S
Sbjct: 447 ATATPKIVTDARYNLKMQNSKLFISSFVRDNLKYDLIPKAAKSLINVVEKM-KQLYPGKS 505
Query: 605 YGHFFLL--KEFYVVSL---ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
G + L KE V + + G A YH ++ R VQK W ++ ++ICAT+AFG
Sbjct: 506 -GIVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDGLRVSVQKGWLANKFDVICATIAFG 564
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGI+KPDVRFVIH+SLPKSIEGY+QE GRAGRDG S C++ YSY D IR++ MI +G
Sbjct: 565 MGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEG-- 622
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC- 778
N R + N N+L++V+YCEN CRR + + HFGE +D C
Sbjct: 623 ------------NTTTGVRSMHLN--NVLQVVAYCENVSVCRRKMLVEHFGEVYDEQSCR 668
Query: 779 --KKTCDNCSKIKSFIEK----DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSL----N 828
K CD C + + E DV++ A +++ + Q+ + +I E++RG+L +
Sbjct: 669 NSKTPCDVCERQRKNPEAIRLFDVSNDALSIMQCLPRM-QKATLKYISELYRGNLIKKTS 727
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS 888
+ + H L + G + + +A R +R LVIE + E + + ++VL +
Sbjct: 728 EQAVRMGHTKLPFYSKGAGMTEQDALRFVRKLVIEGLVHERL--YSIPNQTAAVL----A 781
Query: 889 KAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLN 948
A G++ S K+ VT K +G + S +T S+ Q + +
Sbjct: 782 YAELTEAGKE-----IASGKKQAKVYLHIVTCEKKRKNAGLIELSNMNTVSEAQALKERH 836
Query: 949 LS------AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEING 1002
+ K L L T + + +G Y I ++ ++ +PRT +LL I+
Sbjct: 837 MVKHGDVFTKCLQELTQLITAVAESSGLS-GPYSIVSREGIEQIAALLPRTNSDLLRIDS 895
Query: 1003 IGKAKVSKYGVRLLETIESTIKE 1025
+ + K++KYG ++E + + K+
Sbjct: 896 MTQIKITKYGRLIMELLATYWKQ 918
>gi|400595361|gb|EJP63166.1| RecQ family ATP-dependent DNA helicase [Beauveria bassiana ARSEF
2860]
Length = 1678
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/554 (38%), Positives = 316/554 (57%), Gaps = 50/554 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
FPW+ +++ K F FR NQ E INAT+SG D FVLMPTGGGKSL YQLPA++
Sbjct: 788 FPWSPEVQRMLKDRFRMKGFRQNQLEAINATLSGQDAFVLMPTGGGKSLCYQLPAVVRTG 847
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
G+T+V+SPL+SL+QDQ+ H+ I A +G +++++ ++ +L
Sbjct: 848 KTRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGECSTEYKRQVMSTFGERSPEHFIEL 907
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LY+TPE ++K+ L+ L AR+VIDEAHCVSQWGHDFRPDY+ LG ++KFP
Sbjct: 908 LYITPEMISKNMAFNNALQRLYQNGKFARLVIDEAHCVSQWGHDFRPDYKNLGQARRKFP 967
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD----------CEKVAER 598
N PV+ALTATAT +V D+ LG+ C IF QSFNRPNL+ + E +AE
Sbjct: 968 NVPVMALTATATQNVILDIRHNLGMNTCKIFSQSFNRPNLYYEVRSKGSPVSAVETIAEL 1027
Query: 599 LQ---VGLSYGHFFLLKEFYVVSLECGHK-----AAFYHGSIDPAQRAFVQKQWSKDEIN 650
+ GL+ G + L L + A YH + + VQ +W + +
Sbjct: 1028 IHSKYAGLT-GIVYALSRAGTEKLAEKLRKQRISAQHYHAGMTAPDKVSVQTRWQQGAVK 1086
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
++ AT+AFGMGI+KPDVRFVIHH LPKS+EGY+QE GRAGRDG+ S C+L Y+ D +
Sbjct: 1087 VVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGKPSDCILLYARRDIAVL 1146
Query: 711 KHMIS--QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVH 768
+ MI+ +G AEQ E + L ++ ++C+N+ DCRR L +
Sbjct: 1147 RKMITDGEGNAEQK------------------ERQMQMLNQVAAFCDNEWDCRRTEVLRY 1188
Query: 769 FGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLN 828
FGE+F +A C+K CDNC K F +KD++D A+ +++V+L + ++ ++ G
Sbjct: 1189 FGEEFSAAQCRKNCDNCQSGKVFEQKDLSDCARSAIQVVQLQN-KLTAPQCADILLG--R 1245
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS 888
+Y + HG + L K + R++ L+ +E+ + + YG+ L +
Sbjct: 1246 KYPSHEEALSGEYHGDCRGLMKHQIVRVIDRLLAAKAFVEDNQIGN-YGAAIQYLALG-P 1303
Query: 889 KAHNLIIGRQNVVL 902
+A+ + G++ ++L
Sbjct: 1304 EANMFLSGQRKLML 1317
>gi|346979414|gb|EGY22866.1| ATP-dependent helicase SGS1 [Verticillium dahliae VdLs.17]
Length = 1518
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/521 (41%), Positives = 293/521 (56%), Gaps = 52/521 (9%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG-- 434
W++ + K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA++ G
Sbjct: 609 WSEDVTKALKDRFRMRGFRTNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAVVTSGKT 668
Query: 435 --ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYKLLY 490
IT+V+SPL+SL+QDQ+ HL I A S ++ ++EIL +NS Y ++ +LY
Sbjct: 669 KGITVVVSPLLSLMQDQVDHLTALGIKAKAFSSAIQAPARREILEFMNSPYPDHQFTMLY 728
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
V+PE + S R L ++ + LAR V+DEAHCVSQWGHDFRPDY+ L L+ +P+
Sbjct: 729 VSPEMLNASAQFERALANVYRNQKLARFVVDEAHCVSQWGHDFRPDYKDLFKLRSNYPSV 788
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL----------- 599
P++ALTATAT +V D+ L + C +F QSFNRPNL E+ + L
Sbjct: 789 PIIALTATATTNVIVDIQHNLQIDKCQVFTQSFNRPNLTYAVERKEKGLIETIAQLIQSK 848
Query: 600 ---QVGLSYGHFFLLKEFYVVSLE--CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICA 654
Q G+ Y E L G A+ YH ++ P ++ VQ++W K I ++ A
Sbjct: 849 YDNQTGIIYVLSRKNTEDVATKLRDNYGISASHYHAAMKPEEKWNVQRRWQKGSIKVVVA 908
Query: 655 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI 714
T+AFGMGI+KPDVRFVIHHSLPKS+EGY+QE GRAGRDG+ S C+LY+ Y D +K MI
Sbjct: 909 TIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKPSDCILYFGYGDVFTLKKMI 968
Query: 715 SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD 774
+ G S E L RM +YC++ DCRR+ L +FGE F+
Sbjct: 969 NDG----------------DGSEEQKERQRGMLNRMSTYCDDQKDCRRVTILRYFGEAFN 1012
Query: 775 SAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKH 834
A C KTCDNC F E+D ++ A ++E +K +H + + K
Sbjct: 1013 VADCNKTCDNCLHKGVFEERDFSEFAIAVIETIK--------AHKYLTINQCADILLGKK 1064
Query: 835 RHETLSL-----HGAGK-HLAKSEASRILRHLVIEDFLMEE 869
R +T+ HG K LAK E R++ L+ E L EE
Sbjct: 1065 RPKTIDDNLDDNHGFVKGRLAKHEIERLVDKLLAESALREE 1105
>gi|255725388|ref|XP_002547623.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
gi|240135514|gb|EER35068.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
Length = 1227
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/526 (40%), Positives = 296/526 (56%), Gaps = 39/526 (7%)
Query: 367 DQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQ 426
DQ+ + P+ ++ F FR NQ E + AT+ G DVFVLMPTGGGKSL YQ
Sbjct: 597 DQRRPAGSEPFIDEVYKVLDNTFKLKDFRSNQLEAVCATLQGKDVFVLMPTGGGKSLCYQ 656
Query: 427 LPALI----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSD 482
LPALI G T+VISPL+SL+QDQ+ HL I A +S + + +
Sbjct: 657 LPALIKSGKTSGTTVVISPLISLMQDQVQHLQSKGIKAGMISAHGAKGDNKHTTNLFREG 716
Query: 483 YCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGI 542
+ ++Y++PEK +S + + L + LAR+VIDEAHC+S WGHDFRPDYQGL
Sbjct: 717 FLD--IVYLSPEKANRSGHTQKIIARLYKNDQLARVVIDEAHCLSSWGHDFRPDYQGLKF 774
Query: 543 LKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC---------- 592
K++FPN P++ALTATA V+ED++ L + + I +QSFNR NL+ +
Sbjct: 775 FKEEFPNVPIMALTATANEKVREDILHNLNMKDPIFLKQSFNRTNLFYEIRLKQRDFLKE 834
Query: 593 --EKVAERL--QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKD 647
+ + E+ Q G+ Y H E L E G + +FYH + R +Q W +
Sbjct: 835 IKDYIMEKHPNQTGIIYCHSKQSCEQTSAKLNEYGLRTSFYHAGMSTEDRYKIQTNWQNN 894
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
+I +ICAT+AFGMGI+KPDVRFVIH LP+S+EGY+QE GRAGRDG+ S C++YYS D
Sbjct: 895 KIQVICATIAFGMGIDKPDVRFVIHLFLPRSLEGYYQETGRAGRDGKHSECIMYYSPKDA 954
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
++ +I G +F S V E + E L ++V YCEN +DCRR L
Sbjct: 955 RTLRTLIQ-----------GDEQF----SEDVKEGHLEKLRQVVQYCENTIDCRRQQVLQ 999
Query: 768 HFGEKFDSAHCKKTCDNCSKIKS--FIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFR 824
+F E F+ A C K CDNC +E+D T+ A+ ++ LVK + + + H +VFR
Sbjct: 1000 YFNESFNPADCNKECDNCLNFNQGEIVERDCTEYARDIISLVKSIQRDKVTVIHCQDVFR 1059
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEV 870
G + + H+ HG GK L K+ RI L+ E +L+E +
Sbjct: 1060 GMKYKKIVNLHHDENEYHGKGKALDKNLVERIFFSLINEGYLVEYI 1105
>gi|395839223|ref|XP_003792496.1| PREDICTED: ATP-dependent DNA helicase Q1 [Otolemur garnettii]
Length = 648
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/534 (39%), Positives = 302/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E INATM+G +VF++MPTGGGKSL
Sbjct: 64 SSPAAWNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINATMAGKEVFLVMPTGGGKSLC 123
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 124 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLEISATMLNASSSKEHVKWVHAEMLNKNS 183
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE + RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 184 KLKLIYVTPEKIAKSKMFMSRLEKAYEAKRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 243
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT V +D + L + C F SFNRPNL+ + E
Sbjct: 244 RQFPNTSLIGLTATATNHVLKDAQKILCVGKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 303
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E SL+ G A YH +++P + V + W+
Sbjct: 304 DIVKLINGRYKGQSGIIYCFSQKDSEQVTGSLQSLGINAGAYHANMEPEDKTRVHRSWAA 363
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+E+ ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 364 NELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 423
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
RV M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 424 IFRVSSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLIA 460
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K SF K+VT + L++++K + L++
Sbjct: 461 QHFDEVWNSDACNKMCDNCCKDTSFERKNVTQYCRDLIKILKQAEEMNEKLTPLKLIDSW 520
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +++ +L E+ + Y ++S
Sbjct: 521 MGKGAAKLRVGGV----VPPTLPREDLEKIIAHFLLQQYLKEDYSFT-AYATIS 569
>gi|440908097|gb|ELR58155.1| ATP-dependent DNA helicase Q1, partial [Bos grunniens mutus]
Length = 649
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/539 (39%), Positives = 303/539 (56%), Gaps = 47/539 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TMSG +VF++MPTGGGKSL
Sbjct: 63 SSPASWNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMSGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT+ V +D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E +SL+ G A YH +++P + V ++W+
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIPAGAYHANMEPEDKTKVHRRWAA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNINKCRRVLIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E + C K CDNC K SF K+VT + L++++K L++
Sbjct: 460 QHFDEVWSPEACNKMCDNCCKEISFERKNVTAYCRDLIKILKQAEDLNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKV 885
+ + K R L A L + + +I+ H +I+ +L E+ + Y ++ S LKV
Sbjct: 520 MGKGASKLRVAGL----APPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATI-SYLKV 572
>gi|302890734|ref|XP_003044250.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
gi|256725172|gb|EEU38537.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
Length = 1302
Score = 385 bits (988), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/516 (39%), Positives = 291/516 (56%), Gaps = 42/516 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ ++ K FG FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 687 PWSPEVRRMLKDRFGMEEFRHNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTGK 746
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+V+SPL+SL+QDQ+ H+ + I A G +++++ ++ +LL
Sbjct: 747 TQGVTIVVSPLLSLMQDQVDHMKRLGIQAVAFHGECSAEYKRQVMAAFEEGIPEHHVELL 806
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V KS +++L+ R LARIVIDEAHC+SQWGHDFRPDY+ LG ++Q++P
Sbjct: 807 YVTPEMVGKSTAFNNGMQTLHGRGKLARIVIDEAHCISQWGHDFRPDYKALGQVRQRYPG 866
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE---------------- 593
PV+ALTATAT +V D+ LG+ C F QSFNRPNL+ +
Sbjct: 867 VPVMALTATATQNVIADIRHNLGMDRCQTFSQSFNRPNLYYEVRPKTTNNKTIDSIASLI 926
Query: 594 KVAERLQVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINII 652
++ R Q G+ Y E SL + G A YH +DP ++ VQ W + ++ ++
Sbjct: 927 RLQYRNQSGIVYTISRKNAEKVAESLTKQGIMARHYHAHVDPREKVEVQDGWQRGQVKVV 986
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
ATVAFGMGI+KPDVRFV+HH LPKS+EGY+QE GRAGRDG S C+L+Y D +K
Sbjct: 987 VATVAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAGRDGNPSDCILFYGKGDIRVLKK 1046
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I+ G S E L R+ ++C+N DCRR L +FGE+
Sbjct: 1047 LIADG----------------EGSEEQKERQMSMLNRVTTFCDNRSDCRRAEILRYFGEE 1090
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVK 832
F + C+KTCDNC F ++D ++ A + +V+ G + ++ ++ G +Y
Sbjct: 1091 FTAGQCRKTCDNCKAGLIFEQQDFSEHAIAAIRVVQAQG-RITAVQCADILMG--KKYPP 1147
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
H + + +G + L K E R++ L E E
Sbjct: 1148 YAAHLSDNWYGMARSLKKHELIRVIDKLSAEKVFDE 1183
>gi|57106919|ref|XP_543768.1| PREDICTED: ATP-dependent DNA helicase Q1 [Canis lupus familiaris]
Length = 646
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/534 (39%), Positives = 302/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + +F FR Q E IN TMSG DVF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSSKVKDVLQNIFKLQRFRLLQLETINVTMSGKDVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMINKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC S WGHDFRPDY+ LGILK
Sbjct: 183 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSHWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-------EKVAE 597
++FPNT ++ LTATAT+ V +D + L + C F SFNRPNL+ + E V E
Sbjct: 243 RQFPNTALMGLTATATSHVLKDAQKILCVGKCFTFTASFNRPNLYYEIRQKPSNTEDVIE 302
Query: 598 RL----------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ Q G+ Y E VSL+ G +A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTRVHRRWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRF+IHHS+ KSIE Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFIIHHSMSKSIENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E +++ C + CDNC K S K+VT + LV+++K L++
Sbjct: 460 QHFDEVWNAEACNRMCDNCCKDISCERKNVTAHCRDLVKILKQAEDLNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + A L + + +I+ HL+++ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----APPKLPREDLEKIIAHLLLQQYLKEDYSFT-AYATIS 568
>gi|402885395|ref|XP_003906142.1| PREDICTED: ATP-dependent DNA helicase Q1 [Papio anubis]
Length = 649
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/534 (38%), Positives = 300/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FP ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPKASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRPNLFYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTAVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F K++T+ + L++++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|118151080|ref|NP_001071459.1| ATP-dependent DNA helicase Q1 [Bos taurus]
gi|117306200|gb|AAI26496.1| RecQ protein-like (DNA helicase Q1-like) [Bos taurus]
gi|296487303|tpg|DAA29416.1| TPA: RecQ protein-like (DNA helicase Q1-like) [Bos taurus]
Length = 649
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/539 (39%), Positives = 303/539 (56%), Gaps = 47/539 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TMSG +VF++MPTGGGKSL
Sbjct: 63 SSPASWNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMSGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSPKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT+ V +D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E +SL+ G A YH +++P + V ++W+
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIPAGAYHANMEPEDKTKVHRRWAA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNINKCRRVLIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E + C K CDNC K SF K+VT + L++++K L++
Sbjct: 460 QHFDEVWSPEACNKMCDNCCKEISFERKNVTAYCRDLIKILKQAEDLNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKV 885
+ + K R L A L + + +I+ H +I+ +L E+ + Y ++ S LKV
Sbjct: 520 MGKGASKLRVAGL----APPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATI-SYLKV 572
>gi|426371952|ref|XP_004052901.1| PREDICTED: ATP-dependent DNA helicase Q1 [Gorilla gorilla gorilla]
Length = 649
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/529 (39%), Positives = 298/529 (56%), Gaps = 46/529 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW+ K++ + VF FR Q E IN TM+G +VF++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWSGKVKDILQNVFKLEKFRLLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
++ LTATAT V D + L + C F SFNRPNL+ + E + +
Sbjct: 248 ASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKL 307
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ Q G+ Y E VSL+ G A YH +++P + V ++WS +EI +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
++S C K CDNC K +F K++T+ + LV+++K + L++ + +
Sbjct: 465 VWNSEACNKMCDNCCKDSAFERKNITEYCRDLVKILKQAEELNEKLTPLKLIDSWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 525 AKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|355564072|gb|EHH20572.1| ATP-dependent DNA helicase Q1, partial [Macaca mulatta]
gi|355785959|gb|EHH66142.1| ATP-dependent DNA helicase Q1, partial [Macaca fascicularis]
Length = 647
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/529 (38%), Positives = 298/529 (56%), Gaps = 46/529 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL YQLPA
Sbjct: 66 WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPA 125
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 126 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLI 185
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 186 YVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 245
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
++ LTATAT V D + L + C F SFNR NL+ + E + +
Sbjct: 246 ASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRSNLYYEVRQKPSNTEDFIEDIVKL 305
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ Q G+ Y E VSL+ G A YH +++P + V ++WS +EI +
Sbjct: 306 INGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQV 365
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D R+
Sbjct: 366 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRIS 425
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 426 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMAQHFDE 462
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
++S C K CDNC K +F K++T+ + L++++K + L++ + +
Sbjct: 463 VWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGA 522
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 523 AKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 566
>gi|383420495|gb|AFH33461.1| ATP-dependent DNA helicase Q1 [Macaca mulatta]
Length = 649
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/529 (38%), Positives = 298/529 (56%), Gaps = 46/529 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
++ LTATAT V D + L + C F SFNR NL+ + E + +
Sbjct: 248 ASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRSNLYYEVRQKPSNTEDFIEDIVKL 307
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ Q G+ Y E VSL+ G A YH +++P + V ++WS +EI +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTAVHRKWSANEIQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
++S C K CDNC K +F K++T+ + L++++K + L++ + +
Sbjct: 465 VWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 525 AKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|340914758|gb|EGS18099.1| hypothetical protein CTHT_0061140 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 2325
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/560 (40%), Positives = 318/560 (56%), Gaps = 51/560 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW++ + K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA++
Sbjct: 1349 YPWSEDVRRALKDRFRMSGFRHNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAMVNSG 1408
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
G+T+V+SPL+SL+ DQ+ HL NI A +G + + IL N + ++ +L
Sbjct: 1409 KTRGMTIVVSPLISLMHDQVEHLKALNIRANTFNGELRSDLRSHILNVFNEENPEHYIQL 1468
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V S + LESL ++ AR+VIDEAHCVSQWGHDFRPDY+ LG L++KFP
Sbjct: 1469 LYVTPEMVVNSVAFRKALESLYRKKKFARLVIDEAHCVSQWGHDFRPDYKQLGELRRKFP 1528
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD--------CEKVAERL- 599
PV+ALTATAT +V D+ L + NC +F QSFNRPNL+ + + E +
Sbjct: 1529 GVPVMALTATATRNVIADIKHNLSMENCEVFSQSFNRPNLYYEVRHKGPHYVRDIGEMII 1588
Query: 600 -----QVGLSYGHFFLLKEFYVVSL-ECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
Q G+ Y E +L E H K YH IDP+ + +Q +W EI ++
Sbjct: 1589 NKYPGQSGIIYTLSRHAAESTAATLKEKFHLKVRHYHAQIDPSLKVEIQNEWQSGEIQVV 1648
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFVIH ++PKS+EGY+QE GRAGRDGQ S C LY+ + D ++
Sbjct: 1649 VATIAFGMGIDKPDVRFVIHQNIPKSLEGYYQETGRAGRDGQGSDCYLYFCWQDVPILRR 1708
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I+ E+ P R + N M+ YCE+ CRR+ L +FGE+
Sbjct: 1709 LINND-PEKLPEEKARQRDLLNN--------------MIMYCESKYACRRVQILRYFGEQ 1753
Query: 773 FDSAHCKKTCDNCSKIKS----FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLN 828
FD A C CDNC + ++ F + DVT++A +++ VK T ++ + I E+ +LN
Sbjct: 1754 FDPADCNNLCDNCREGRTGAGGFEKVDVTESALAILKAVKHT-KEATLGRITEIV--TLN 1810
Query: 829 QYVKKHRHETLSLHGAG--KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVN 886
+ V+ ++H + GAG K + + RI+ L E+ L + + S +V L
Sbjct: 1811 RNVRANQH----IEGAGVCKGMHSYDVHRIVMALHAEESLSDFTRVSQT-NNVPITLFTL 1865
Query: 887 QSKAHNLIIGRQNVVLRFPS 906
A G++ + L PS
Sbjct: 1866 GKNAKEYFAGKRRLELEVPS 1885
>gi|297261947|ref|XP_002798535.1| PREDICTED: ATP-dependent DNA helicase Q1 isoform 2 [Macaca mulatta]
gi|297261949|ref|XP_001094207.2| PREDICTED: ATP-dependent DNA helicase Q1 isoform 1 [Macaca mulatta]
Length = 649
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/529 (38%), Positives = 298/529 (56%), Gaps = 46/529 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
++ LTATAT V D + L + C F SFNR NL+ + E + +
Sbjct: 248 ASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRSNLYYEVRQKPSNTEDFIEDIVKL 307
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ Q G+ Y E VSL+ G A YH +++P + V ++WS +EI +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
++S C K CDNC K +F K++T+ + L++++K + L++ + +
Sbjct: 465 VWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 525 AKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|351704749|gb|EHB07668.1| ATP-dependent DNA helicase Q1 [Heterocephalus glaber]
Length = 677
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/539 (39%), Positives = 306/539 (56%), Gaps = 48/539 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 98 SSPAAWNKEDFPWSDKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 157
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 158 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 217
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 218 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 277
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT V +D + L + C F SFNRPNL+ + E
Sbjct: 278 RQFPNTSLIGLTATATNHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 337
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E +SL+ G A YH +++P + V +WS
Sbjct: 338 DIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIHAGAYHANMEPEDKTKVHTRWSA 397
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+E+ ++ ATVAFGMGI+KPDVR+VIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D
Sbjct: 398 NELQVVVATVAFGMGIDKPDVRYVIHHSMSKSMENYYQESGRAGRDDMRADCILYYGFGD 457
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 458 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNS-KCRRVLIA 493
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K SF +K+VT + L++++K + L++
Sbjct: 494 QHFDEVWNSEACNKMCDNCCKDVSFEKKNVTAYCRDLIKILKQAEELNEKLTPLKLIDSW 553
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKV 885
+ + K R + A L + + +I+ H +++ +L E+ + Y ++ S LKV
Sbjct: 554 MGKGPGKLRVAGM----AAPELPREDLEKIIAHFLLQQYLREDYSFT-AYATI-SYLKV 606
>gi|358387252|gb|EHK24847.1| hypothetical protein TRIVIDRAFT_212358 [Trichoderma virens Gv29-8]
Length = 1658
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/568 (37%), Positives = 312/568 (54%), Gaps = 48/568 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ ++ K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA++
Sbjct: 765 PWSADVQKTLKDRFRMKGFRQNQLEAINATLAGDDAFVLMPTGGGKSLCYQLPAVVKSGR 824
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+V+SPL+SL+QDQ+ H+ I A + +++++ N ++ +LL
Sbjct: 825 TRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNSECSPEYKRQVMSAFNERNPEHFIELL 884
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE +KS + L+SL ARIVIDEAHCVSQWGHDFRPDY+ LG L+ KFP
Sbjct: 885 YVTPEMASKSPQFMNALQSLYRSRKFARIVIDEAHCVSQWGHDFRPDYKTLGQLRSKFPE 944
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK------VAERLQVGL 603
PV+ALTATAT +V D+ LG+ NC +F QSFNRPNL+ + V +++ +
Sbjct: 945 VPVMALTATATQNVIVDIKHNLGMNNCQVFSQSFNRPNLYYEVRPKSSNPVVTQQIAALI 1004
Query: 604 SYGHFFLLKEFYVVSL-----------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINII 652
+ + + Y +S + G A YH +I P ++ VQ W K ++ ++
Sbjct: 1005 NSKYPNVTGIVYTISRKQAEDVAQKLSDNGITARHYHAAITPTEKVEVQTAWQKGQVKVV 1064
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVR+VIHH +PKS+EGY+QE GRAGRDG+ S C+L+Y +D +K
Sbjct: 1065 VATIAFGMGIDKPDVRYVIHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKADIRVLKK 1124
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I G S E L R+ ++C+N DCRR L +FGE
Sbjct: 1125 LIMDG----------------DGSKDQKERQMAMLNRVTAFCDNKADCRRTEVLRYFGED 1168
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVK 832
F + C KTCDNC F ++D ++ A + +V+ + +++ ++ G +Y
Sbjct: 1169 FTPSQCHKTCDNCQAGLVFEQQDFSEYAIAAIRIVQQQ-HRLTANQCADILIG--RKYPD 1225
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
+ HG K + K E R++ L E E+ + +G L++ + A+
Sbjct: 1226 NQDQNSDEYHGMAKGMKKHEMVRVIDRLSAEKGFHEDNIVGN-HGVAIQYLRIGPA-ANQ 1283
Query: 893 LIIGRQNVVLRFPSA----INSTKLSKS 916
+ GR+ ++L + N TK+ K+
Sbjct: 1284 FLTGRRKLMLTVQVSDSGDANQTKIKKT 1311
>gi|291237646|ref|XP_002738744.1| PREDICTED: Bloom syndrome protein-like [Saccoglossus kowalevskii]
Length = 1050
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/454 (45%), Positives = 277/454 (61%), Gaps = 43/454 (9%)
Query: 362 IEGSNDQKWSSW---DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTG 418
IEG++ + + + D P +K++ +++FG H FR NQ E INA + D F+LMPTG
Sbjct: 432 IEGASPSEVAQFGRLDLPHSKEMLKVFRQIFGLHKFRTNQLEAINAALLSKDCFILMPTG 491
Query: 419 GGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRE 478
GGKSL YQLP I G+TLV+SPL SLIQDQ+ L ++P+ LSG+ E + I RE
Sbjct: 492 GGKSLCYQLPGSISKGLTLVVSPLKSLIQDQVQKLCLRDVPSAHLSGDASPNEVELIYRE 551
Query: 479 LNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQ 538
L+ + KLLYVTPEK++ S L+ LE+L +R +L+R VIDEAHCVSQWGHDFRPDY+
Sbjct: 552 LSRRDPQLKLLYVTPEKISSSSKLVSTLENLYSRGMLSRFVIDEAHCVSQWGHDFRPDYK 611
Query: 539 GLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL---------- 588
L L++ FP P++ALTATAT V+ D+V+ L + + I F QSFNR NL
Sbjct: 612 RLNKLRELFPTVPIMALTATATPRVRADIVKQLKIRSPIWFIQSFNRSNLKYSIYPKKPS 671
Query: 589 --WMDCEKVAERLQVGLSYGHFFLLK--EFYVVSLE---CGHKAAFYHGSIDPAQRAFVQ 641
DC + + G S G + L E V+ E G A YH ++ R + Q
Sbjct: 672 KVTQDCINLIQARFAGES-GIIYCLSRNECEKVAAELSSAGISAKAYHAGLESNSRTYTQ 730
Query: 642 KQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 701
+ W +DE ++CAT+AFGMGI+KPDVRFVIHHSLPKSIEG++QE GRAGRDG + C+L+
Sbjct: 731 QAWVRDEYKVVCATIAFGMGIDKPDVRFVIHHSLPKSIEGFYQESGRAGRDGNIAHCILF 790
Query: 702 YSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCR 761
YSY D R++ ++ + E F + + ENL RMV YCEN+ DCR
Sbjct: 791 YSYQDMTRLRKVMER---ENDNF-------------EAIRVHIENLQRMVQYCENETDCR 834
Query: 762 RLLQLVHFGEK---FD--SAHCKKTCDNCS-KIK 789
R L + GEK +D S CDNC+ KIK
Sbjct: 835 RSQLLEYLGEKVISYDLCSGIVSTACDNCANKIK 868
>gi|380798559|gb|AFE71155.1| ATP-dependent DNA helicase Q1, partial [Macaca mulatta]
Length = 645
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/529 (38%), Positives = 298/529 (56%), Gaps = 46/529 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL YQLPA
Sbjct: 64 WNKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPA 123
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 124 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLI 183
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 184 YVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 243
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
++ LTATAT V D + L + C F SFNR NL+ + E + +
Sbjct: 244 ASLIGLTATATNHVLTDAQKILCVEKCFTFTASFNRSNLYYEVRQKPSNTEDFIEDIVKL 303
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ Q G+ Y E VSL+ G A YH +++P + V ++WS +EI +
Sbjct: 304 INGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTAVHRKWSANEIQV 363
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D R+
Sbjct: 364 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRIS 423
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 424 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLMAQHFDE 460
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
++S C K CDNC K +F K++T+ + L++++K + L++ + +
Sbjct: 461 VWNSEACNKMCDNCCKDSAFERKNITEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGA 520
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 521 AKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 564
>gi|449274903|gb|EMC83940.1| ATP-dependent DNA helicase Q1, partial [Columba livia]
Length = 656
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/523 (39%), Positives = 300/523 (57%), Gaps = 45/523 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
++ + W+ DFPW +K++ + F FR Q E +NA M+G D+F++MPTGGGKSL
Sbjct: 58 TSAEAWNKKDFPWYEKIKTALQGKFKLQKFRSLQLETVNAAMAGKDIFLVMPTGGGKSLC 117
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPA+ G TLVI PL+SL++DQ+M L Q I A L+ + + + E+ +
Sbjct: 118 YQLPAVCSDGFTLVICPLISLMEDQLMVLEQLGISAALLNASSSKEHVKWVHTEMLNRNS 177
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE LARI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 178 QLKLVYVTPEKIAKSKMFMSKLEKAYQAGRLARIAVDEVHCCSQWGHDFRPDYKSLGILK 237
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN P++ LTATAT V +D + L + CI F SFNRPNL+ + E
Sbjct: 238 RQFPNAPLIGLTATATNHVLKDAQKILHVQKCITFTASFNRPNLYYEVRHKPSNNEDFIE 297
Query: 594 KVAERLQ------VGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + G+ Y E VSL+ G KA YH ++D + V K W+
Sbjct: 298 DIVKTINGRYKGLSGIVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTKVHKGWAA 357
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
++I ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD Q++ C+LYY + D
Sbjct: 358 NQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYGFGD 417
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ E L MVSYC+N CRR+L
Sbjct: 418 IFRISSMVV-----------------MENVGQ------EKLYDMVSYCQNMNKCRRVLIA 454
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E +DSA+C + CDNC + S + D+T + L+++++ L++
Sbjct: 455 RHFDEVWDSANCNRMCDNCCRENSCEKMDITGYCRDLIKILEQAENMSEKLTPLKLIDAW 514
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ V K R ++ KH + E RI+ HL+++ +L E+
Sbjct: 515 SGKGVSKLRVAEVT---PPKH-PREELERIIAHLLLQQYLKED 553
>gi|171687593|ref|XP_001908737.1| hypothetical protein [Podospora anserina S mat+]
gi|170943758|emb|CAP69410.1| unnamed protein product [Podospora anserina S mat+]
Length = 1692
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/467 (43%), Positives = 287/467 (61%), Gaps = 35/467 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
FPW+ + K F +FR NQ IN T++G D FV+MPTGGGKSL YQLPA++
Sbjct: 809 FPWSADVLRALKDRFRLVNFRHNQLPAINCTLAGEDAFVMMPTGGGKSLCYQLPAVVQSG 868
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK--YKL 488
G+T+V+SPL+SL+ DQ+ H+ + NI A +GN+ ++ IL +LN + + Y+L
Sbjct: 869 KTKGVTIVVSPLLSLMSDQVEHMERINILAVAFNGNLAAAHKRHILGKLNHETPENFYQL 928
Query: 489 LYVTPEKVAKSDVLLRQ-LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LYVTPE +A + +R+ L+ L+ R AR+VIDEAHCVSQWGHDFRPDY+ LG +++F
Sbjct: 929 LYVTPEMLANENTQIRRALKMLHQRGKFARLVIDEAHCVSQWGHDFRPDYKALGEFRKQF 988
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------------EKV 595
P PV+ALTA+AT SV++DV LG+ C +F QSFNRPNL+ + +
Sbjct: 989 PGVPVMALTASATESVRKDVQHQLGMTGCKLFTQSFNRPNLYYEVFPKPPTYVDPLGSLI 1048
Query: 596 AERL--QVGLSYGHFFLLKEFYVVSL--ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
A R Q G+ Y E L + G KAA YH +D R +Q++W DEI++
Sbjct: 1049 ATRYKNQTGIIYTTSRASCEGIAGKLVEKYGIKAAPYHAGLD--DRPEIQRKWQDDEIHV 1106
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I AT+AFGMGI+KPDVRFVIH SLPK++EGY+QE GRAGRDG+ + C+LY+SY D ++
Sbjct: 1107 IVATIAFGMGIDKPDVRFVIHVSLPKTMEGYYQETGRAGRDGKPADCILYFSYGDVTSLR 1166
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + ++ G + + A + LE L RM YC N CRR L +FGE
Sbjct: 1167 RMVQKDELDKD----GKHVRSQAEKDKQLEL----LDRMTFYCLNTTSCRRTQLLGYFGE 1218
Query: 772 KFDSAHCKKTCDNC--SKIKSFIEKDVTDTAKKLVELVKLTGQQFSS 816
F++A+C K CD C + + + D TD AK +++L+ G + S
Sbjct: 1219 DFNAANCNKQCDFCLLGEKVTLKQVDRTDWAKAIIDLIPGMGAKGGS 1265
>gi|91204323|emb|CAJ71976.1| strongly similar to ATP-dependent DNA helicase [Candidatus Kuenenia
stuttgartiensis]
Length = 772
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/668 (36%), Positives = 363/668 (54%), Gaps = 80/668 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+K FG F P Q +II + D+FVLMPTGGGKSL YQLPAL+ GIT+VISPL++L
Sbjct: 64 QKYFGYSKFYPLQEDIIRWVLEQKDLFVLMPTGGGKSLCYQLPALLFDGITVVISPLIAL 123
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + I ATF++ ++ E R+L K K+LY+ PE++A + L+
Sbjct: 124 MKDQVDGLTENGISATFINSSVHAREVAARKRDLLEG--KIKILYIAPERLAMRE-FLQF 180
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L ++ IDE+HC+S+WGHDFRP+Y+ L +L++KFP TP +ALTATAT SV++
Sbjct: 181 LQELK----VSLFAIDESHCISEWGHDFRPEYRQLKMLREKFPKTPFMALTATATPSVQK 236
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMD------------CEKVAERLQVGLSYGHFFLLKE 613
D+V L L + +F SFNR NL+ C + + G+ Y E
Sbjct: 237 DIVTQLKLTDYKVFNASFNRKNLFYQIIPKDNPYHQILCVLKERKKESGIIYCQGRKTVE 296
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL+ G++A YH + R Q+++ +++I II AT+AFGMGI+KP+VR+VIH
Sbjct: 297 SLAGSLQGEGYRALPYHAGLSAEMRTENQERFIREDIEIIVATIAFGMGIDKPNVRYVIH 356
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LPKSIEGY+QE GRAGRDG +S C+L +SY+D I++++ I Q E
Sbjct: 357 YDLPKSIEGYYQETGRAGRDGLKSDCILLFSYADKIKIEYFIHQKEDENEK--------- 407
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ + L +VSYCE +V CRR + L +FGEKF + +C + CD C K
Sbjct: 408 --------QAAYQQLKALVSYCEGNV-CRRKILLDYFGEKFTTHNC-ENCDTCLNPKE-- 455
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D T A+KL+ V G+ F H+++V GS NQ + ++ H L+ G GK +KS+
Sbjct: 456 QFDGTVAAQKLLSCVYRVGESFGMHHVIDVLLGSQNQKILQNSHTALTTFGIGKEYSKSQ 515
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
R L+ +L +E G VLK+ S++ ++ G++ V+L P S
Sbjct: 516 WLTFSRELIQLGYLAQE-------GDRYPVLKLT-SQSREVLQGKKKVLLVKPEETASLA 567
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+S D N L+ LR LR L + E +
Sbjct: 568 VSGEDK-----------------------------NYDLALFERLRTLRKTLADQ--ESM 596
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKN 1032
Y IF + +L+ +S R P+T +L +I+G+G+ K+ KYG L+ I + ++ T K
Sbjct: 597 PPYVIFHDTSLKEMSMRYPQTASDLKKISGMGELKLRKYGDLFLKEICNYCRQHQITPKE 656
Query: 1033 GSSSNDSN 1040
+S +
Sbjct: 657 ANSRRQAT 664
>gi|322708811|gb|EFZ00388.1| QDE3 protein [Metarhizium anisopliae ARSEF 23]
Length = 1697
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/553 (38%), Positives = 309/553 (55%), Gaps = 50/553 (9%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ +++ K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 820 PWSPEVQKMLKDRFRMKGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAIVRTGK 879
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+V+SPL+SL+QDQ+ H+ I A +G +++I+ + ++ +LL
Sbjct: 880 TRGVTIVVSPLLSLMQDQVDHMKGLGIQAVAFNGGCSAEYKRQIMSTFDEPSPEHFIELL 939
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V+ + +++L R AR+VIDEAHCVSQWGHDFRPDY+ +G ++ +FP
Sbjct: 940 YVTPEMVSMNSAFNNAMQTLYQRGKFARLVIDEAHCVSQWGHDFRPDYKTIGQVRMRFPR 999
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKVAERL 599
P +ALTATAT +V D+ L + NC +F QSFNRPNL+ + E +A +
Sbjct: 1000 VPFMALTATATQNVIVDIKHNLNMANCQVFSQSFNRPNLYYEVRTKKSHANATESIASLI 1059
Query: 600 QV------GLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINII 652
G+ Y E +L G A YH +IDP + VQ+ W K +I ++
Sbjct: 1060 NAKYHNTTGIVYTLSRKQAEEVAQTLAGYGIAARHYHAAIDPQAKVDVQRSWQKGDIKVV 1119
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFV+HH LPKS+EGY+QE GRAGRDG+ S C+L+Y +D +K
Sbjct: 1120 VATIAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAGRDGKPSDCILFYGKADIRVLKK 1179
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
MI+ G N A R + L R+ ++C+N DCRR L +FGE
Sbjct: 1180 MIADGDG------------NNAQKERQMVM----LNRVTAFCDNKSDCRRTEVLRYFGED 1223
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVK 832
F + C+K+CDNC F ++D ++ A +++V T ++ ++S ++ G K
Sbjct: 1224 FVPSQCQKSCDNCRAGLVFEQQDFSEYAIAAIQVVH-TQRRLTASQCADILLGK-----K 1277
Query: 833 KHRHETL---SLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSK 889
HE L +G K L K E R++ L E E + YG L+V S
Sbjct: 1278 SPAHEELVSGGQYGIAKGLKKHEVVRVIDRLSAEKAFHENNVVGN-YGVAIQYLEVG-ST 1335
Query: 890 AHNLIIGRQNVVL 902
AH + G++ ++L
Sbjct: 1336 AHLFLTGQRKLML 1348
>gi|302789379|ref|XP_002976458.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
gi|300156088|gb|EFJ22718.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
Length = 711
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 259/722 (35%), Positives = 364/722 (50%), Gaps = 95/722 (13%)
Query: 367 DQKWSSWDFPWTKKLEANNK--KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
+Q WS +F W EA+N VFG ++R NQREI+NA MS +V V+M GGGKSL
Sbjct: 52 EQDWSG-NFEWDN--EASNLLLNVFGISTYRRNQREIVNALMSNKNVVVVMAAGGGKSLC 108
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL+ PGI LV+SPL+SLIQDQ+M L + A L+ E++EI R L
Sbjct: 109 YQLPALLRPGIALVVSPLLSLIQDQVMGLAALGVSAAMLTSTTSKEEEKEIYRVLEKGDG 168
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
++LYVTPEK+AKS + +LE N L+ + IDEAHC SQWGHDFRPDY+ LGILK
Sbjct: 169 NLRILYVTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILK 228
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLS 604
++FP P++ALTATAT V+ D+ + L ++ C F S NRPNL+ + V ++ QV
Sbjct: 229 KQFPKVPMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYE---VRDKKQVAAD 285
Query: 605 YGH--FFLLKEFY------VVSL----ECGH----------KAAFYHGSIDPAQRAFVQK 642
+KE Y +V EC AA YH +D R V +
Sbjct: 286 VIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHR 345
Query: 643 QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY 702
+WS +++ +I TVAFGMGINKPDVRFVIHH+L KS+E Y+QE GRAGRDG S CVL++
Sbjct: 346 RWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLFF 405
Query: 703 SYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRR 762
+D V QS N T +NL M YC++ CRR
Sbjct: 406 RPAD-----------VPRQSCMVFSEN------------TGLQNLYAMARYCQSKQRCRR 442
Query: 763 LLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILE- 821
+F E+ C CD C+ +EKDVT+ K LV+ V + + +L+
Sbjct: 443 AAFFQYFAEQVQ--ECNGMCDTCAFENDVVEKDVTEYGKSLVQSVMDVAESDKKTTLLQL 500
Query: 822 --VFRGSLNQ---YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVY 876
++R L Q ++ L K ++K +A +I+ L+++ L ++ + +
Sbjct: 501 VDLWRSQLRQAGNHISGVYGHILQSQTGDKEMSKDDAEQIILQLILDGTLAKDFQ----H 556
Query: 877 GSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVT-PAKGSLLSGKLSPSRN 935
+ ++ V A LI+ + PS L + + P K +L
Sbjct: 557 TAYATNAYVKAGSAARLILQGE-----LPSCKRKVILEQCEKRGPVKTTL---------- 601
Query: 936 DTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEE 995
D + + + L LR L G G+ Y + + ++ LS VP +
Sbjct: 602 ---------DDCAMQSGMARMLDTLRQTLAAADG-GIFPYAVLSSQHIKRLSSHVPTSIT 651
Query: 996 ELLEINGIGKAKVSKYGVRLLETI-ESTIKEFYKTD-KNGSSSNDSNDSGKRRRDENEAP 1053
EL EI IGK K SKYG +++ T+ E T K D K SSS +G + R +
Sbjct: 652 ELDEI--IGKTKSSKYGEQIMTTLNEYTTKNTDGPDTKEASSSKRVATTGGQARQTKRSR 709
Query: 1054 NA 1055
NA
Sbjct: 710 NA 711
>gi|344266668|ref|XP_003405402.1| PREDICTED: ATP-dependent DNA helicase Q1 [Loxodonta africana]
Length = 648
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/534 (39%), Positives = 302/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ +++ K VF FR Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPDTWNKEDFPWSDRVKDVLKNVFKLQKFRSLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q + AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGVSATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 KLKLIYVTPEKIAKSKMFMSKLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FP+T ++ LTATAT V +D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPSTSLIGLTATATNHVLKDAQKILCVDKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANMEPEDKTRVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 SEIQVVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQESGRAGRDDVKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
RV M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRVSSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K SF K+VT+ + L++++K + L++
Sbjct: 460 QHFDEVWNSDACNKMCDNCCKDISFDRKNVTEYCRDLIKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + A L + + +I+ H +++ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----APPTLPREDLEKIIAHFLLQQYLKEDYSFT-AYATIS 568
>gi|444719769|gb|ELW60560.1| ATP-dependent DNA helicase Q1, partial [Tupaia chinensis]
Length = 648
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/523 (39%), Positives = 296/523 (56%), Gaps = 45/523 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FR Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 61 SSPAAWNKEDFPWSGKVKDVLQNVFKLQKFRALQLETINVTMAGKEVFLVMPTGGGKSLC 120
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 121 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 180
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 181 NLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 240
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT+ V +D + L + C F SFNRPNL+ + E
Sbjct: 241 RQFPNTSLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 300
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
V + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 301 DVVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANMEPDDKTKVHRRWSA 360
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI +I ATVAFGMGI+KPDVRF+IHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 361 NEIQVIVATVAFGMGIDKPDVRFIIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 420
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC N CRR+L
Sbjct: 421 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCLNISKCRRVLIA 457
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K SF K+VT+ + L++++K + L++
Sbjct: 458 QHFDEVWNSEACNKMCDNCCKNISFERKNVTEYCRDLIKILKQAEELNEKLTPLKLIDSW 517
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + K R + L + E +++ H +++ +L E+
Sbjct: 518 MGKGAAKLRVAGV----VPPMLPREELEKVIAHFLLQQYLKED 556
>gi|348569184|ref|XP_003470378.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Cavia porcellus]
Length = 650
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 306/539 (56%), Gaps = 47/539 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G ++F++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSAKVKDVLQNVFKLQKFRPLQLETINVTMAGEEIFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 TLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT V +D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNTSLIGLTATATNHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + + G+ Y E +SL+ G A YH +++P + V +WS
Sbjct: 303 DIVKLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGIHAGTYHANMEPEDKTKVHTRWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+E+ ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D
Sbjct: 363 NELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMRADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
RV M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRVSSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K SF +K+VT + L++++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDVSFEKKNVTVYCRDLIKILKQAEELNEKLTPLKLMDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKV 885
+ + K R +++ L + + +++ H +++ +L E+ + Y ++ S LKV
Sbjct: 520 MGKGPAKLRVAGVAV----PTLPREDLEKMIAHFLLQQYLKEDYSFT-AYATI-SYLKV 572
>gi|291392532|ref|XP_002712674.1| PREDICTED: RecQ protein-like [Oryctolagus cuniculus]
Length = 887
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/524 (39%), Positives = 298/524 (56%), Gaps = 47/524 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ +++ + F FR Q E INATM+G +VF++MPTGGGKSL
Sbjct: 301 SSPATWNKEDFPWSGRVKDTLQNTFRLQKFRQLQLETINATMAGKEVFLVMPTGGGKSLC 360
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q + AT L+ + + + E+ +
Sbjct: 361 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGVSATMLNASSSKEHVKWVHAEMVNKNS 420
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 421 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 480
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT V +D + L + C+ F SFNRPNL+ + E
Sbjct: 481 RQFPNTSLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPSNTEDFIE 540
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V +WS
Sbjct: 541 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANMEPEDKTKVHTRWSA 600
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 601 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDTKADCILYYGFGD 660
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLE-TNTENLLRMVSYCENDVDCRRLLQ 765
R+ M+ V+E + L MVSYC+N CRR+L
Sbjct: 661 IFRISSMV------------------------VMENVGQQKLYEMVSYCQNISKCRRVLI 696
Query: 766 LVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRG 825
HF E ++S C K CDNC K S+ +K+VT+ + L++++K + L++
Sbjct: 697 AQHFDEVWNSEACNKMCDNCRKDISYEKKNVTEHCRDLIKILKQAEELNEKLTPLKLMDS 756
Query: 826 SLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + K R +S L + E +++ H +++ +L E+
Sbjct: 757 WMGKGASKLRVAGVS----APLLPREELEKMIAHFLLQQYLKED 796
>gi|296418818|ref|XP_002839022.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635016|emb|CAZ83213.1| unnamed protein product [Tuber melanosporum]
Length = 527
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/528 (40%), Positives = 301/528 (57%), Gaps = 39/528 (7%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----C 432
W++ + ++ F FR NQ E INAT++G DVFVLMPTGGGKSL YQLPA+I
Sbjct: 10 WSRDVADALRRRFNLKGFRNNQLEAINATLAGDDVFVLMPTGGGKSLIYQLPAIIRSGKT 69
Query: 433 PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK--YKLLY 490
G+T+V+SPL+SL+QDQ+ HL + NI A F++G + +++ + L + + +LLY
Sbjct: 70 HGVTIVVSPLLSLMQDQVDHLQKLNIMAFFINGEINEDQRRLLYDSLYHEDVEEMVQLLY 129
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
+TPE +AKSD ++ L SL+ R LARIV+DEAHCVSQWGHDFRPDY+ LG LK K+P
Sbjct: 130 ITPEMIAKSDKMVNTLLSLHRRGKLARIVVDEAHCVSQWGHDFRPDYKTLGNLKSKYPGV 189
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-----------WMDCEKVAERL 599
P +ALTATAT V+ DV L + F QSFNRPNL D ++ R
Sbjct: 190 PWIALTATATEKVRMDVQLNLDMPRAKTFTQSFNRPNLNYQVSPKTKNVLDDIVEICRRP 249
Query: 600 QVGLSYGHFFLLK----EFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICA 654
+ G + L E L G +A +H + ++ +QK+W N+I A
Sbjct: 250 EYLNKTGIIYCLSRQNCEQTAEKLRTRGIRAQHFHAKLQADEKIRLQKEWQARRFNVIVA 309
Query: 655 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI 714
T+AFGMGI+KPDVRFVIHH++PKS+EGY+QE GRAGRDG S C L+Y+Y D + MI
Sbjct: 310 TIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGLPSGCFLFYAYPDTSTLYRMI 369
Query: 715 SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD 774
G E L +V YCEN +CRR+ L +FGE+F
Sbjct: 370 KDGEGSHDQ----------------KRRQMEMLQMVVQYCENKAECRRVQVLRYFGERFP 413
Query: 775 SAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKH 834
C+ CDNC+ + +DV+D A+ +E+V T ++ + ++ FRGS N+ K
Sbjct: 414 EQECRGGCDNCASGIEYETQDVSDYARAALEIVSQTSEK-TMLFCMDAFRGSANKAHKDA 472
Query: 835 RHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV 882
+ +G GK +S+ R+ HL E ++E+ K+ VS V
Sbjct: 473 GSGRMQGYGFGKSWVRSDCERLFHHLASEGAIIEQHVKNGAGFYVSHV 520
>gi|410963996|ref|XP_003988543.1| PREDICTED: ATP-dependent DNA helicase Q1 [Felis catus]
Length = 804
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/547 (39%), Positives = 308/547 (56%), Gaps = 48/547 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FR Q E IN TMSG +VF++MPTGGGKSL
Sbjct: 216 SSPAAWNKEDFPWSGKVKEVLQNVFKLQRFRLLQLETINVTMSGKEVFLVMPTGGGKSLC 275
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 276 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSPKEHVKWVHAEMVNKNS 335
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC S WGHDFRPDY+ LGILK
Sbjct: 336 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSHWGHDFRPDYKALGILK 395
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT+ V +D + L + C F SFNRPNL+ + E
Sbjct: 396 RQFPNTALIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEIRQKPSNTEDFIE 455
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G +A YH +++P + V ++WS
Sbjct: 456 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTKVHRRWSA 515
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KSIE Y+QE GRAGRD R+ C+LYY + D
Sbjct: 516 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAGRDDMRADCILYYGFGD 575
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 576 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLIA 612
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C + CDNC K S K+VT + L++++K L++
Sbjct: 613 QHFDEVWNSEACNRMCDNCCKDISCEVKNVTAYCRDLIKILKQAEDLNEKLTPLKLMDSW 672
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVN 886
+ + K R + A L + + +I+ H +++ +L E+ + Y ++ S LK+
Sbjct: 673 MGKGASKLRVAGV----APPQLPREDLEKIIAHFLLQQYLKEDYSFT-AYATI-SYLKIG 726
Query: 887 QSKAHNL 893
KAH L
Sbjct: 727 -PKAHLL 732
>gi|302811147|ref|XP_002987263.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
gi|300144898|gb|EFJ11578.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
Length = 711
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 257/720 (35%), Positives = 360/720 (50%), Gaps = 91/720 (12%)
Query: 367 DQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQ 426
+Q WS +F W + VFG +FR NQREI+NA MS +V V+M GGGKSL YQ
Sbjct: 52 EQDWSG-NFEWDNEASNLLLNVFGISTFRRNQREIVNALMSNKNVVVVMAAGGGKSLCYQ 110
Query: 427 LPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY 486
LPAL+ PGI LV+SPL+SLIQDQ+M L + A L+ E++EI R L
Sbjct: 111 LPALLRPGIALVVSPLLSLIQDQVMGLAALGVSAAMLTSTTSKEEEKEIYRVLEKGDGNL 170
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
++LYVTPEK+AKS + +LE N L+ + IDEAHC SQWGHDFRPDY+ LGILK++
Sbjct: 171 RILYVTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKKQ 230
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYG 606
FP P++ALTATAT V+ D+ + L ++ C F S NRPNL+ + V ++ QV
Sbjct: 231 FPKVPMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYE---VRDKKQVAADVI 287
Query: 607 H--FFLLKEFY------VVSL----ECGH----------KAAFYHGSIDPAQRAFVQKQW 644
+KE Y +V EC AA YH +D R V ++W
Sbjct: 288 EDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHRRW 347
Query: 645 SKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSY 704
S +++ +I TVAFGMGINKPDVRFVIHH+L KS+E Y+QE GRAGRDG S CVLY+
Sbjct: 348 SSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLYFRP 407
Query: 705 SDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLL 764
+D V QS N T +NL M YC++ CRR
Sbjct: 408 AD-----------VPRQSCMVFSEN------------TGLQNLYAMARYCQSKQRCRRAA 444
Query: 765 QLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILE--- 821
+F E+ C CD C+ +EKDVT+ K LV+ V + + +L+
Sbjct: 445 FFQYFAEQVQ--ECNGMCDTCAFENDVVEKDVTEYGKSLVQSVMDVAESDKKTTLLQLVD 502
Query: 822 VFRGSLNQ---YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGS 878
++R L Q ++ L K ++K +A +I+ L+++ L ++ + + +
Sbjct: 503 LWRSQLRQAGNHMSGVYGHILQSQTGDKEMSKDDAEQIILQLILDGTLAKDFQ----HTA 558
Query: 879 VSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVT-PAKGSLLSGKLSPSRNDT 937
++ V A LI+ PS L + + P K +L
Sbjct: 559 YATNAYVKAGSAARLILQGD-----LPSCKRKVILEQCEKRGPVKTTL------------ 601
Query: 938 PSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEEL 997
D + + + L LR L G G+ Y + + ++ LS +VP + EL
Sbjct: 602 -------DDCAMQSGMARMLDKLRQTLAAADG-GLFPYAVLSSEHIKRLSSQVPTSITEL 653
Query: 998 LEINGIGKAKVSKYGVRLLETI-ESTIKEFYKTD-KNGSSSNDSNDSGKRRRDENEAPNA 1055
EI IGK K SKYG +++ + E T K D K SSS +G + R + NA
Sbjct: 654 DEI--IGKTKSSKYGEQIITALNEYTTKNTDDPDTKEASSSKRVATTGGQARQTKRSRNA 711
>gi|322699139|gb|EFY90903.1| QDE3 protein [Metarhizium acridum CQMa 102]
Length = 1698
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/516 (39%), Positives = 294/516 (56%), Gaps = 42/516 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ +++ K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 820 PWSPEVQKMLKDRFRMKGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRTGK 879
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+V+SPL+SL+QDQ+ H+ I A +G +++I+ N ++ +LL
Sbjct: 880 TRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGGCSAEYKRQIMSAFNERSPEHFIELL 939
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V+ + +++L R AR+VIDEAHCVSQWGHDFRPDY+ LG ++ KFP
Sbjct: 940 YVTPEMVSMNPAFNNAMQTLYQRGKFARLVIDEAHCVSQWGHDFRPDYKSLGQVRMKFPE 999
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE------KVAERLQVGL 603
P++ALTATAT +V D+ L + NC +F QSFNRPNL+ + E + +
Sbjct: 1000 VPIMALTATATQNVIVDIKHNLNMANCQVFSQSFNRPNLYYEVRTKTSNSNATESIASLI 1059
Query: 604 SYGHFFLLKEFYVVSLE---------CGH--KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
+ + + Y +S + GH A YH +IDP ++ VQ W K +I ++
Sbjct: 1060 NAKYRNITGIVYTISRKQAEEVARKLAGHGIAARHYHAAIDPQEKVEVQTSWQKGDIKVV 1119
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KP+VRFV+HH LPKS+EGY+QE GRAGRDG+ S C+L+Y +D +K
Sbjct: 1120 VATIAFGMGIDKPNVRFVMHHGLPKSLEGYYQETGRAGRDGKPSDCILFYGKADIRVLKK 1179
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I+ G G+N E L R+ ++C+N DCRR L +FGE
Sbjct: 1180 LITDG--------DGNNEQK--------ERQMVMLNRVTAFCDNKSDCRRTEVLRYFGED 1223
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVK 832
F + C+K+CDNC F ++D + A +++V+ T Q+ ++S ++ G +Y
Sbjct: 1224 FVPSQCRKSCDNCRAGLVFEQQDFSTYAIAAIQVVQ-TQQRLTASQCADILLG--KKYPA 1280
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
+ +G K L K E R++ L E E
Sbjct: 1281 HEEELSEEQYGIAKGLKKHEIVRVIDRLSAEKAFHE 1316
>gi|302926382|ref|XP_003054285.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
gi|256735226|gb|EEU48572.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
Length = 1678
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/517 (40%), Positives = 295/517 (57%), Gaps = 42/517 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ ++ K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA+I
Sbjct: 818 PWSPDVQRMLKDRFRMKGFRHNQLEAINATLEGKDAFVLMPTGGGKSLCYQLPAVIKSGR 877
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+V+SPL+SL+QDQ+ H+ I A +G +++++ + ++ +LL
Sbjct: 878 TRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGECSAQYKRQVMSAFDERSPEHFIELL 937
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE V+K+ + +L+++ AR+VIDEAHCVSQWGHDFRPDY+ LG ++Q++P
Sbjct: 938 YVTPEMVSKNVAFNNGMRTLHSKGKFARLVIDEAHCVSQWGHDFRPDYKTLGQVRQRYPG 997
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERL---- 599
PV+ALTATAT +V D+ LG+ NC F QSFNRPNL+ + +K E +
Sbjct: 998 VPVMALTATATQNVIVDIRHNLGMDNCQTFCQSFNRPNLYYEVRPKTTNDKTIEAIASLV 1057
Query: 600 ------QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINII 652
Q G+ Y E SL + G A+ YH +DP ++ VQ W + EI I+
Sbjct: 1058 QSKYPNQSGIVYTISRKNAEKVAESLSQHGIAASHYHAHVDPQEKVEVQNAWQRGEIKIV 1117
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFV+HH LPKS+EGY+QE GRAGRDG+ S C+L+Y D +K
Sbjct: 1118 VATIAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAGRDGKPSDCILFYGKQDIRVLKR 1177
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I+ G S E L R+ ++C+N DCRR L +FGE+
Sbjct: 1178 LIADG----------------DGSHEQKERQMAMLNRVTAFCDNKSDCRRAEILRYFGEE 1221
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVK 832
F A C KTCDNC F ++D ++ A +++V+ + + + ++ G +Y +
Sbjct: 1222 FTGAQCNKTCDNCKAGLIFEQQDFSEYAIAAIKVVQAQ-NRITPAQCADILMG--KKYPQ 1278
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + HG K L K E R++ L E E+
Sbjct: 1279 YEAQLSDNWHGMAKGLKKHELIRVIDKLSAEKAFHED 1315
>gi|149049048|gb|EDM01502.1| rCG29929, isoform CRA_b [Rattus norvegicus]
Length = 645
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 304/534 (56%), Gaps = 47/534 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS DFPW+ K++ + VF FRP Q E +NATM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WSKEDFPWSGKVKHVLRDVFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNSSSSKEHVKCVHTEMMNKNSHLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L + +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
++ LTATAT V +D + L + C+ F SFNRPNL+ + E +A
Sbjct: 248 ISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPSSAEDFIENIANL 307
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ + G+ Y E +SL+ G +A YH +++P R V QWS +E+ +
Sbjct: 308 INGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHANMEPEDRTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDWRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRALIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+++ C K CDNC K SF +K++T+ + L++++K L++ + +
Sbjct: 465 VWNADACNKMCDNCCKDDSFEKKNITEHCQALIKILKQAEGLNEKLTPLKLIDAWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKV 885
K R +++ L + + +I+ H +++ +L E+ + Y ++ S LKV
Sbjct: 525 AKFRVAGVAVPA----LPREDLEKIIVHALLQQYLKEDYSFT-AYATI-SYLKV 572
>gi|426225386|ref|XP_004006847.1| PREDICTED: ATP-dependent DNA helicase Q1 [Ovis aries]
Length = 649
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/534 (39%), Positives = 299/534 (55%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DF W+ K++ + VF FRP Q E IN TMSG +VF++MPTGGGKSL
Sbjct: 63 SSPASWNKEDFAWSGKVKDVLQNVFKLQKFRPLQLETINVTMSGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT+ V +D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E +SL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIPAGSYHANMEPEDKTKVHRRWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNIHKCRRVLIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E + C K CDNC K +F K+VT + L++++K L++
Sbjct: 460 QHFDEVWSPEACNKMCDNCCKEITFERKNVTAYCRDLIKILKQAEDLNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R L A L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGASKLRVAGL----APPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYATIS 568
>gi|148226526|ref|NP_001089858.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus laevis]
gi|80476410|gb|AAI08556.1| MGC131022 protein [Xenopus laevis]
Length = 652
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/539 (39%), Positives = 306/539 (56%), Gaps = 46/539 (8%)
Query: 364 GSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSL 423
G + W + DF W++K+ F +FR Q E INATMSG DVF++MPTGGGKSL
Sbjct: 64 GDCAENWRNEDFLWSQKIRRALSDSFQLQTFRSLQLETINATMSGRDVFLIMPTGGGKSL 123
Query: 424 TYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDY 483
YQLPAL G TLVI PL+SL++DQ+M L + + AT L+ + + + E+ +
Sbjct: 124 CYQLPALCSDGFTLVICPLISLMEDQLMVLNRLGVSATSLNASSSKEHVKWVHGEMMNKK 183
Query: 484 CKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGIL 543
+ KLLYVTPEKVAKS V + +LE LLAR+ +DE HC SQWGHDFRPDY+ LGIL
Sbjct: 184 SQLKLLYVTPEKVAKSKVFMSRLEKAYQGGLLARVAVDEVHCCSQWGHDFRPDYKTLGIL 243
Query: 544 KQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW-------------- 589
K++FPN+P++ LTATAT+ V +D + L + + F SFNRPNL+
Sbjct: 244 KRQFPNSPLIGLTATATSHVLKDAQKILCVQKPLTFTASFNRPNLFYEVRLKPSSSEDFI 303
Query: 590 MDCEKVAE---RLQVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWS 645
D K+ + Q G+ Y E +SL+ G +A YH +++P ++ V +W+
Sbjct: 304 ADITKLINSRYKGQSGIIYCFSQKDSEQVTMSLQKLGIRAGAYHANMEPRDKSKVHTKWT 363
Query: 646 KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYS 705
+EI I+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY +
Sbjct: 364 ANEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFG 423
Query: 706 DFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
D R+ M+ + N G+ + L MV Y +N CRR+L
Sbjct: 424 DIFRISSMVV-----------------MENVGQ------QKLYEMVKYSQNLNRCRRVLI 460
Query: 766 LVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRG 825
HF E +DSA C K CDNC+ + E D++ + +V++V+ + L++
Sbjct: 461 AQHFDEVWDSAKCNKMCDNCNSEGACEEADISQYCRDIVKIVEQADRMDEKLTPLKLIDS 520
Query: 826 SLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLK 884
+ + K R + L + E RI+ HL+++ FL E+ + Y ++S V K
Sbjct: 521 WVGKGAPKLRVPGVQ----PPKLLRHEIERIIAHLILQQFLREDFSFT-AYATISYVKK 574
>gi|406866234|gb|EKD19274.1| QDE3-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1765
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/534 (41%), Positives = 302/534 (56%), Gaps = 55/534 (10%)
Query: 371 SSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPAL 430
S + PW+K ++ ++ F FR +Q + INAT+SG D FVLMPTGGGKSL YQLPA+
Sbjct: 877 SMFHHPWSKDVKTVLRERFKLKGFRRHQIDAINATLSGQDAFVLMPTGGGKSLCYQLPAV 936
Query: 431 I----CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEI---LRELNSDY 483
+ G+TLVISPL+SL+ DQ+ HLL I A L+ + + +I LRE N +
Sbjct: 937 VNSGKTRGVTLVISPLLSLMNDQVQHLLVKKIQAATLNSDSPSEVKSDIWSALREENPEQ 996
Query: 484 CKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGIL 543
+LLY+TPE + KS ++ L L + LARIVIDEAHCVSQWGHDFRPDY LG L
Sbjct: 997 Y-IQLLYITPEMINKSPPMIAALTRLYKKGKLARIVIDEAHCVSQWGHDFRPDYVALGRL 1055
Query: 544 KQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD----------CE 593
+ FP P++ALTATAT++VK+DV+ LG+ C +F QSFNRPNL+ + +
Sbjct: 1056 RSDFPRVPLMALTATATSNVKDDVMTNLGMKGCPVFTQSFNRPNLYYEVRLKRGKGVLAK 1115
Query: 594 KVAE---------RLQVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQK 642
V E + Q G+ Y E L H +A YH ++ +A V +
Sbjct: 1116 MVTEIVELVRDTYKNQTGIIYALSQKGCEDLAQKLANEHNLRAYHYHAGMNREDKATVLQ 1175
Query: 643 QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY 702
W +I ++ AT+AFGMGI+KPDVRFVIH S+PKS+EGY+QE GRAGRDG+RS C LY+
Sbjct: 1176 DWQTGKIQVVVATIAFGMGIDKPDVRFVIHSSVPKSLEGYYQETGRAGRDGKRSGCYLYF 1235
Query: 703 SYSDFIRVKHMI--SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVD 759
Y D +K I S+G +Q NR N+L+ MV YCEN D
Sbjct: 1236 GYQDTSTLKKFIEDSEGNEDQ------KNR-------------QRNMLKNMVGYCENRTD 1276
Query: 760 CRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSH 818
CRR L +FGEKF C+++CDNC F + D T+ AK +++V + F+
Sbjct: 1277 CRRSQVLRYFGEKFSREDCRQSCDNCCSDAVFDDVDYTEYAKAALKIVTHVQHHSFTILA 1336
Query: 819 ILEVFRGSLNQYVKKHRHETLSLH---GAGKHLAKSEASRILRHLVIEDFLMEE 869
+++ RG+ K + H G + + + R+ LV E L+E+
Sbjct: 1337 CVDILRGAAGAKSKLTKQGGPGEHEEFGMANKMDRGDVERLFYRLVNEQALVEK 1390
>gi|62858709|ref|NP_001016316.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|89266858|emb|CAJ83846.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|213624210|gb|AAI70790.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
Length = 558
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/521 (40%), Positives = 299/521 (57%), Gaps = 45/521 (8%)
Query: 364 GSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSL 423
G + + W DF W++K+ F SFR Q E INATM+G DVF++MPTGGGKSL
Sbjct: 64 GDSAENWQKEDFLWSQKIRDALCNSFQLRSFRSLQLETINATMAGRDVFLIMPTGGGKSL 123
Query: 424 TYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDY 483
YQLPA+ G TLVI PLVSL++DQ+M L + + AT L+ + + + E+ +
Sbjct: 124 CYQLPAVCSDGFTLVICPLVSLMEDQLMVLDRLGVSATSLNASSSKEHVKWVHGEMTNKN 183
Query: 484 CKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGIL 543
+ KLLYVTPEK+AKS + + +LE LLAR+ +DE HC SQWGHDFRPDY+ LGIL
Sbjct: 184 SRLKLLYVTPEKIAKSKLFMSRLEKAYQAGLLARVAVDEVHCCSQWGHDFRPDYKTLGIL 243
Query: 544 KQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKV 595
K++FPN+P++ LTATAT V +D + L + + F SFNRPNL+ + + +
Sbjct: 244 KRQFPNSPLIGLTATATTHVLKDAQKILCVPKPLTFTASFNRPNLFYEVRLKPSSSQDFI 303
Query: 596 AE---------RLQVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWS 645
A+ R Q G+ Y E +SL+ G +A YH +++P + V +W+
Sbjct: 304 ADIVKLINSRYRGQSGIIYCFSQKDSEHVTMSLQKLGIRAGTYHANMEPRDKTKVHTKWT 363
Query: 646 KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYS 705
+EI I+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY +
Sbjct: 364 ANEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDARADCILYYGFG 423
Query: 706 DFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
D R+ M+ + N G+ + L MV YC++ CRR+L
Sbjct: 424 DIFRISSMVV-----------------MENVGQ------KKLYEMVGYCQSPDRCRRVLI 460
Query: 766 LVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRG 825
HF E +DSA C K CDNC+ + + D+T + +V++++ Q L++
Sbjct: 461 AQHFDEVWDSAKCNKMCDNCNSEGGWEKADITPYCRDIVKILEQANQMDEKLTPLKLMDA 520
Query: 826 SLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFL 866
+ + V K R + L + E RI+ HL+++ FL
Sbjct: 521 WVGKGVAKLRVPGVR----PPQLPRPEIERIIAHLLLQQFL 557
>gi|619863|gb|AAA60261.1| DNA helicase [Homo sapiens]
Length = 659
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/534 (38%), Positives = 299/534 (55%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FRP Q E IN TM+G +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHDEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE RI +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 ELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPN ++ LTATAT V D + L + C F SFNRPNL+ + E
Sbjct: 243 RQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N RR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKSRRVLMA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K +F ++T+ + L++++K + L++
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKDSAFERTNITEYCRDLIKILKQAEELNEKLTPLKLIDSW 519
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ H +I+ +L E+ + Y ++S
Sbjct: 520 MGKGAAKLRVAGV----VAPTLPREDLEKIIAHFLIQQYLKEDYSFT-AYAAIS 568
>gi|281340169|gb|EFB15753.1| hypothetical protein PANDA_019119 [Ailuropoda melanoleuca]
Length = 640
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/529 (39%), Positives = 300/529 (56%), Gaps = 46/529 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS DFPW+ K++ + VF FR Q E IN TMSG DVF++MPTGGGKSL YQLPA
Sbjct: 62 WSKEDFPWSGKVKDVLQTVFKLQRFRLLQLETINVTMSGKDVFLVMPTGGGKSLCYQLPA 121
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + K KL+
Sbjct: 122 LCSDGFTLVICPLISLMEDQLMVLKQLGISATTLNASSSKEHVKWVHAEMVNKSSKLKLI 181
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE + RI +DE HC S WGHDFRPDY+ LGILK++FPN
Sbjct: 182 YVTPEKIAKSKMFMSRLEKAYEAKRFTRIAVDEVHCCSHWGHDFRPDYKALGILKRQFPN 241
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
T ++ LTATAT+ V +D + L + C F SFNRPNL+ + E + +
Sbjct: 242 TALMGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEIRQKPSNTEDFIEDIVKL 301
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ Q G+ Y E VSL+ G +A YH +++P + V ++WS +EI +
Sbjct: 302 INGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTNVHRRWSANEIQV 361
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KSIE Y+QE GRAGRD ++ C+LYY + D R+
Sbjct: 362 VVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAGRDDMKADCILYYGFGDIFRIS 421
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 422 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLIAQHFDE 458
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
++S C + CDNC K + K+V + L++++K L++ + +
Sbjct: 459 VWNSEACNRMCDNCCKDIACERKNVAAHCRDLIKILKQAEDLNEKLTPLKLIDSWMGRGA 518
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
K R + A L + + +++ HL+++ +L E+ + Y ++S
Sbjct: 519 AKLRVAGV----APPKLPREDLEKMIAHLLLQQYLKEDYSFT-AYATIS 562
>gi|25145561|ref|NP_502390.2| Protein HIM-6 [Caenorhabditis elegans]
gi|28201770|sp|O18017.2|BLM_CAEEL RecName: Full=Bloom syndrome protein homolog; AltName: Full=High
incidence of males protein 6; AltName: Full=RecQ helicase
homolog
gi|20853750|gb|AAM26298.1| RecQ helicase [Caenorhabditis elegans]
gi|22859109|emb|CAB05609.2| Protein HIM-6 [Caenorhabditis elegans]
Length = 988
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 244/680 (35%), Positives = 358/680 (52%), Gaps = 61/680 (8%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
K+L K FG + FR Q++ I +T+ GHD FVLMPTG GKSL YQLPA+I PG+T+V
Sbjct: 233 KELYDTLKSKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVV 292
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
+SPL SLI+DQ M + + I L+ ++ Q++I EL S KLLYVTPEK++
Sbjct: 293 VSPLRSLIEDQKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISA 352
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF--PNTPVLALT 556
S L L+ R LLAR VIDEAHCVSQWGHDFRPDY L L++K+ P P++ALT
Sbjct: 353 SGRLNSVFFDLHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLSSLREKYANPPVPIIALT 412
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL----------SYG 606
ATAT + D L + N +F SF R NL D A R + + G
Sbjct: 413 ATATPKIVTDARDHLKMQNSKLFISSFVRDNLKYDLIPKAARSLINVVEKMKQLYPGKSG 472
Query: 607 HFFLL--KEFYVVSL---ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
+ L KE V + + G A YH ++ R VQ+ W ++ ++ICAT+AFGMG
Sbjct: 473 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMG 532
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
I+KPDVRFVIH+SLPKSIEGY+QE GRAGRDG S C++ YSY D IR++ MI +G
Sbjct: 533 IDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEG---- 588
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC--- 778
N R + N N+L++V+YCEN CRR + + HFGE +D C
Sbjct: 589 ----------NTTTGVRSMHLN--NVLQVVAYCENVSVCRRKMLVEHFGEVYDEQSCRNS 636
Query: 779 KKTCDNCSKIKSFIEK----DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSL----NQY 830
K CD C + + E DV+ A +++ + Q+ + +I E++RG+L +
Sbjct: 637 KTPCDICERQRKNAEAIRLFDVSTDALSILKCLPRM-QKATLKYISELYRGALIKKSQEQ 695
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
+ H L + G+ +++ +A R +R LVIE ++ E + +
Sbjct: 696 AMRLGHTKLPFYSKGQGMSEQDALRFVRKLVIEGYIHERLYSVPNQAAAVFAYAELTEAG 755
Query: 891 HNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLS 950
+L G++ + K+ VT + +G + S + S+ Q + ++
Sbjct: 756 RDLANGKK-----------TAKVYLHIVTCERKRKNAGLIELSNMNIVSEAQALKERHMV 804
Query: 951 AKLYSSLRMLRTLL-----VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGK 1005
R L+ L V E+ Y I ++ ++ +PRT +LL I+ + +
Sbjct: 805 KHGDVFTRCLQDLTHLITAVAESSGLSGPYSIVSREGIEQIAALLPRTNSDLLRIDSMTQ 864
Query: 1006 AKVSKYGVRLLETIESTIKE 1025
KV+KYG ++E + + K+
Sbjct: 865 IKVTKYGRLIMELLATYWKQ 884
>gi|348537236|ref|XP_003456101.1| PREDICTED: ATP-dependent DNA helicase Q1 [Oreochromis niloticus]
Length = 651
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 323/582 (55%), Gaps = 62/582 (10%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
Q++ DFPW+ K+ + K F +FRP Q + IN TMSG D+F++MPTG GKSL YQL
Sbjct: 85 QRYDGTDFPWSSKVGQHLKATFHLSNFRPLQLKAINLTMSGKDLFLVMPTGRGKSLCYQL 144
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA+ G TLVI+PLVSL++DQ+M+L ++ A L+ + + ++ + +K
Sbjct: 145 PAICSNGFTLVITPLVSLMEDQLMYLKTIDVSAVMLNASSSREHAKMVMAGMTDPKAPFK 204
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
L+YVTPEK+AKS +L+ +LE LL+RI +DE HC SQWGHDFRPDY+ LGILK++F
Sbjct: 205 LVYVTPEKIAKSKLLMSRLEKAYKANLLSRIAVDEVHCCSQWGHDFRPDYKLLGILKRQF 264
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-------------- 593
P P+L LTATAT+SV +D + L + I SFNR NL+ +
Sbjct: 265 PKVPLLGLTATATSSVLKDCEKILCVPQAITLTASFNRTNLYYEVRIKDSDSEASVNDIA 324
Query: 594 ---KVAERLQVGLSYGHFFLLKEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKD 647
K + Q G+ Y F K+ +VS E + A YH ++D ++ V ++W+ +
Sbjct: 325 ALIKSKYKDQSGIVY--VFSQKDAELVSAELQKRDILAYPYHANMDSEDKSRVHRKWTSN 382
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
+I ++ ATVAFGMGI+KPDVRFVIHH++ KSIE Y+QE GRAGRD + CV+++ ++D
Sbjct: 383 KIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDDSPADCVVFFGFADI 442
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
R+ M+ + N G+ + LL+MV YC+N CRR L V
Sbjct: 443 FRISTMVV-----------------MENVGQ------QKLLQMVDYCQNVDRCRRSLMAV 479
Query: 768 HFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSL 827
HF E +D C + CD CS+ K + D+T A+++V++V+L L++ +
Sbjct: 480 HFDEVWDDEGCNQMCDTCSQAKDYPTVDITQHARQVVQIVELAASMDEKLTPLKLVDAWM 539
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQ 887
+ KHR + L++ +A ++ HL+++ +L E+ +
Sbjct: 540 GKGPAKHRKMIQT-----TTLSRRQAEVVIVHLLLQGYLREDFSFTPY------------ 582
Query: 888 SKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGK 929
+ + +GR+ +L+ P+ S K+ + A + SGK
Sbjct: 583 TTYFYMKLGRKASLLKNPTHTLSVKMRDAGAGAALVKVSSGK 624
>gi|358398791|gb|EHK48142.1| hypothetical protein TRIATDRAFT_262699 [Trichoderma atroviride IMI
206040]
Length = 1621
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/549 (37%), Positives = 308/549 (56%), Gaps = 44/549 (8%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----C 432
W+ ++ K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA++
Sbjct: 740 WSADVQKILKDRFRMKGFRHNQLEAINATLAGEDAFVLMPTGGGKSLCYQLPAVVKSGRT 799
Query: 433 PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLLY 490
G+T+VISPL+SL+QDQ+ H+ I A + +++++ N ++ +LLY
Sbjct: 800 RGVTIVISPLLSLMQDQVDHMKALGIQAVAFNSECSAEYKRQVMSAFNERNPEHFIELLY 859
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
+TPE + S L + +L ++ AR VIDEAHCVSQWGHDFRPDY+ LG L+ KFPN
Sbjct: 860 ITPEMASNSVQFLNAMVNLYQKQKFARFVIDEAHCVSQWGHDFRPDYKNLGQLRSKFPNV 919
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK------VAERLQVGLS 604
PV+ALTATAT +V D+ LG++NC +F QSFNRPNL+ + V +++ ++
Sbjct: 920 PVMALTATATQNVIVDIKYNLGMINCQVFSQSFNRPNLYYEVRPKGSNPVVTQQIASLIN 979
Query: 605 YGHFFLLKEFYVVSLE-----------CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
+ + Y +S + G A YH I PA++ VQ+ W K +I ++
Sbjct: 980 SKYRNVTGIVYTISRKQAEDVAEKLSNNGIAARHYHAQITPAEKVEVQQAWQKGQIKVVV 1039
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+KPDVRFV+HH +PKS+EGY+QE GRAGRDG+ S C+L+Y +D +K +
Sbjct: 1040 ATIAFGMGIDKPDVRFVMHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKADIRVLKRL 1099
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I G S E L R+ ++C+N DCRR L +FGE F
Sbjct: 1100 IIDG----------------EGSKDQKERQMVMLNRVTAFCDNKADCRRTEVLRYFGEDF 1143
Query: 774 DSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKK 833
+ C KTCDNC F ++D ++ A + +V+ + +++ ++ G +Y +
Sbjct: 1144 HPSQCHKTCDNCQAGLVFEQQDFSEYAIAAIRVVQQQS-RLTANQCADILIG--RKYPEY 1200
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
+ HG K + K E R++ L E E+ + +G L++ + A+
Sbjct: 1201 QEQNSDEYHGIAKGMKKHEIVRVIDRLSAEKGFHEDNIVGN-HGVAIQYLRIGPT-ANQF 1258
Query: 894 IIGRQNVVL 902
++GR+ ++L
Sbjct: 1259 LMGRRKLML 1267
>gi|440298813|gb|ELP91444.1| DNA helicase hus2, putative [Entamoeba invadens IP1]
Length = 1361
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 238/689 (34%), Positives = 367/689 (53%), Gaps = 81/689 (11%)
Query: 367 DQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQ 426
D W F W + N FGN SFRP+Q+ IIN +SGH+ VLMPTGGGKSL YQ
Sbjct: 608 DTDWEHTSFTWDEVALKQNHNDFGNDSFRPSQKAIINCALSGHNTLVLMPTGGGKSLCYQ 667
Query: 427 LPALICPGITLVISPLVSLIQDQIMHL----LQANIPATFLSGNME-----WTEQQEILR 477
L + + GIT+VISPLVSLIQDQ+ +L L+ N+ A + + E + E + + +
Sbjct: 668 LASALMTGITVVISPLVSLIQDQVANLNSTSLENNVLAYYQGSDFEAGKRFFAESKSVCK 727
Query: 478 ELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDY 537
K KL+++TPE++ + D L L+S A IV+DEAHCVSQWGHDFR Y
Sbjct: 728 P------KLKLVFLTPERI-QLDSFLEALDSYYNNRNFALIVVDEAHCVSQWGHDFRESY 780
Query: 538 QGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM------- 590
Q L +L Q++P P++ LTATAT V+ D++ ++G+ + ++F QSFNR NL
Sbjct: 781 QKLSVLTQRYPGVPLMMLTATATERVQNDILLSVGVESAVVFTQSFNRKNLRYCVKPKTK 840
Query: 591 ----DCEKVAE---RLQVGLSYGHFFL-LKEFYVVSLECGHKAAFYHGSIDPAQRAFVQK 642
D EK+ + R Q G+ Y K+ + G KA FYH + P +R Q+
Sbjct: 841 NVIDDIEKLIKTKYRNQSGIVYCLSRKNTKDVCDQLVARGIKACFYHAELTPEERQKAQR 900
Query: 643 QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYY 702
WS E ++ICAT+AFGMGINKPDVRFVIHHSLPK++EGY+QE GRAGRDG+ + C+L+Y
Sbjct: 901 GWSDGEFDVICATIAFGMGINKPDVRFVIHHSLPKTLEGYYQESGRAGRDGEPADCILFY 960
Query: 703 SYSD-FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCR 761
SY D F+ + ++ + N ++S + E + +NL +++SYCEN VDCR
Sbjct: 961 SYRDKFVYERFLMED------------QKKNNSDSEHI-ELSRDNLNQVISYCENTVDCR 1007
Query: 762 RLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILE 821
R + L +FGE FD C KTCDNC D+T+ K +V+LV ++ +S+ +
Sbjct: 1008 RTMVLRYFGENFDPKWCNKTCDNCYNPAQTEIVDLTEIGKYVVKLVD-KHKKITSTMAIS 1066
Query: 822 VFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSS 881
+ +G+ K + E G+ K + ++++ + + L E +++S V+ ++
Sbjct: 1067 ILKGAAAAAKKYGKDEIG--FGSAKGRDQQLLDQLMKEMCLSKILSERIEES-VHKNIVV 1123
Query: 882 VLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQP 941
L+ + + + G+ P + K+ V G ++
Sbjct: 1124 YLRFG-ANYNKFVSGK------MPINVRIKKVGHDGVEMESGVRMT-------------- 1162
Query: 942 QNEVDLNLSAKLYSSLRMLRTLLVKEA----GEGVMAYH-IFGNATLQHLSKRVPRTEEE 996
++L+ +L +R +++E G+G + H + L + +P T EE
Sbjct: 1163 ------TYQSELFETLDNVRQEILEEVQKKTGKGSLLKHNLVDTRALNKIVVVMPTTLEE 1216
Query: 997 LLEINGIGKAKVSKYGVRLLETIESTIKE 1025
E + K S YG R ++ + + ++E
Sbjct: 1217 FEEKITMKKNIKSAYGKRFVDAVNNFLRE 1245
>gi|58865766|ref|NP_001012098.1| ATP-dependent DNA helicase Q1 [Rattus norvegicus]
gi|81910891|sp|Q6AYJ1.1|RECQ1_RAT RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|50925619|gb|AAH79026.1| RecQ protein-like (DNA helicase Q1-like) [Rattus norvegicus]
gi|149049049|gb|EDM01503.1| rCG29929, isoform CRA_c [Rattus norvegicus]
Length = 621
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/534 (39%), Positives = 304/534 (56%), Gaps = 47/534 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS DFPW+ K++ + VF FRP Q E +NATM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WSKEDFPWSGKVKHVLRDVFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNSSSSKEHVKCVHTEMMNKNSHLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L + +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
++ LTATAT V +D + L + C+ F SFNRPNL+ + E +A
Sbjct: 248 ISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPSSAEDFIENIANL 307
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ + G+ Y E +SL+ G +A YH +++P R V QWS +E+ +
Sbjct: 308 INGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHANMEPEDRTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDWRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRALIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+++ C K CDNC K SF +K++T+ + L++++K L++ + +
Sbjct: 465 VWNADACNKMCDNCCKDDSFEKKNITEHCQALIKILKQAEGLNEKLTPLKLIDAWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKV 885
K R +++ L + + +I+ H +++ +L E+ + Y ++ S LKV
Sbjct: 525 AKFRVAGVAVPA----LPREDLEKIIVHALLQQYLKEDYSFT-AYATI-SYLKV 572
>gi|320593232|gb|EFX05641.1| DNA/RNA helicase [Grosmannia clavigera kw1407]
Length = 1854
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/522 (41%), Positives = 298/522 (57%), Gaps = 47/522 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
F W++++ K F FR NQ E INAT+SG D FVLMPTGGGKSL YQLPA+I G
Sbjct: 920 FDWSQEVRKALKDRFRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVISSG 979
Query: 435 ----ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
+++V+SPL+SL+QDQ+ HL NI A+ + + ++ IL + ++ +L
Sbjct: 980 RTNGVSIVVSPLLSLMQDQVDHLKALNIAASAFNSSTPAAARKHILALFSKANPEHFLQL 1039
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V+KS + LE+L ++ LAR+VIDEAHCVSQWGHDFRPDY+ LG ++++FP
Sbjct: 1040 LYVTPEMVSKSSQFCQGLETLYRKKKLARLVIDEAHCVSQWGHDFRPDYKALGEVRRRFP 1099
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD--------CEKVAERLQ 600
+ PV+ALTATAT +V D+ L + C +F QSFNRPNL+ + E +AE +Q
Sbjct: 1100 SVPVMALTATATPNVIVDIKHNLSIDGCKVFSQSFNRPNLYYEIREKGKGAVENIAELIQ 1159
Query: 601 VGLS--YGHFFLLKEFYVVSL------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINII 652
S G + L + VS+ + G A YH I ++ +Q+ W K I I+
Sbjct: 1160 SQYSGQTGIVYTLSQKSTVSIADKLRDKFGISAHHYHAGIPADEKTRIQRDWQKGRIKIV 1219
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFVIHH LPKS+EGY+QE GRAGRDG S C LY+SY D ++
Sbjct: 1220 VATIAFGMGIDKPDVRFVIHHYLPKSLEGYYQETGRAGRDGIHSDCFLYFSYGDIKNLRK 1279
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
I+ + A R E L RMV +CEN DCRR L +FGE
Sbjct: 1280 FIADSEGSE------------AQKAR----QREMLNRMVDFCENKRDCRRSEILRYFGEN 1323
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVK 832
F+ + C TCDNC F D T A + +V+ + I + G + Q +
Sbjct: 1324 FEQSGCGGTCDNCKYGGKFDLTDFTQYAVAALRVVE------AYELITMIQCGDILQGKR 1377
Query: 833 KHRHETLSL---HGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+ E SL +G ++L K E ++ L+ E L EE K
Sbjct: 1378 RPEPEHSSLQEMYGIARNLKKHEIHMMIYRLLGEGALKEENK 1419
>gi|301787243|ref|XP_002929036.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Ailuropoda
melanoleuca]
Length = 661
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/529 (39%), Positives = 300/529 (56%), Gaps = 46/529 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS DFPW+ K++ + VF FR Q E IN TMSG DVF++MPTGGGKSL YQLPA
Sbjct: 83 WSKEDFPWSGKVKDVLQTVFKLQRFRLLQLETINVTMSGKDVFLVMPTGGGKSLCYQLPA 142
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + K KL+
Sbjct: 143 LCSDGFTLVICPLISLMEDQLMVLKQLGISATTLNASSSKEHVKWVHAEMVNKSSKLKLI 202
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE + RI +DE HC S WGHDFRPDY+ LGILK++FPN
Sbjct: 203 YVTPEKIAKSKMFMSRLEKAYEAKRFTRIAVDEVHCCSHWGHDFRPDYKALGILKRQFPN 262
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------EKVAER 598
T ++ LTATAT+ V +D + L + C F SFNRPNL+ + E + +
Sbjct: 263 TALMGLTATATSHVLKDAQKILCVEKCFTFTASFNRPNLYYEIRQKPSNTEDFIEDIVKL 322
Query: 599 L------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ Q G+ Y E VSL+ G +A YH +++P + V ++WS +EI +
Sbjct: 323 INGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTNVHRRWSANEIQV 382
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KSIE Y+QE GRAGRD ++ C+LYY + D R+
Sbjct: 383 VVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAGRDDMKADCILYYGFGDIFRIS 442
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 443 SMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLIAQHFDE 479
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
++S C + CDNC K + K+V + L++++K L++ + +
Sbjct: 480 VWNSEACNRMCDNCCKDIACERKNVAAHCRDLIKILKQAEDLNEKLTPLKLIDSWMGRGA 539
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
K R + A L + + +++ HL+++ +L E+ + Y ++S
Sbjct: 540 AKLRVAGV----APPKLPREDLEKMIAHLLLQQYLKEDYSFT-AYATIS 583
>gi|340522439|gb|EGR52672.1| hypothetical protein TRIREDRAFT_102458 [Trichoderma reesei QM6a]
Length = 1690
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/552 (37%), Positives = 305/552 (55%), Gaps = 48/552 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ ++ K F FR NQ E INAT++G D FVLMPTGGGKSL YQLPA++
Sbjct: 791 PWSADVQKTLKDRFRMKGFRQNQLEAINATLAGDDAFVLMPTGGGKSLCYQLPAVVKSGK 850
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KLL 489
G+T+V+SPL+SL+QDQ+ H+ I A + +++++ + ++ +LL
Sbjct: 851 TRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNSECSPEYKRQVMSAFDERNPEHFIELL 910
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE +KS + L++L + ARIVIDEAHCVSQWGHDFRPDY+ LG L+ KFP
Sbjct: 911 YVTPEMASKSPQFMNALQNLYRNKKFARIVIDEAHCVSQWGHDFRPDYKTLGQLRAKFPQ 970
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK------VAERLQVGL 603
PV+ALTATAT +V D+ L + NC +F QSFNRPNL+ + V +++ +
Sbjct: 971 VPVMALTATATQNVIVDIKHNLRMKNCQVFSQSFNRPNLYYEVRPKGSNPVVTQQIAALI 1030
Query: 604 SYGHFFLLKEFYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINII 652
+ + Y +S E G A YH I P+++ VQ W K +I ++
Sbjct: 1031 KAKYPNVTGIIYTISRKQAEDVAQKLCEHGITARHYHAQITPSEKVEVQTAWQKGQIKVV 1090
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVR+VIHH +PKS+EGY+QE GRAGRDG+ S C+L+Y D +K
Sbjct: 1091 VATIAFGMGIDKPDVRYVIHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKGDIRVLKK 1150
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I G G+N E L R+ ++C+N DCRR L +FGE
Sbjct: 1151 LILDGE--------GNNEQK--------ERQMVMLNRVTAFCDNKADCRRTEVLRYFGED 1194
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVK 832
F + C KTCDNC F ++D ++ A + +V+ + +++ ++ G +Y
Sbjct: 1195 FSPSQCNKTCDNCQAGLVFEQQDFSEYAIAAIRIVQ-QQHRLTANQCADILIG--RKYPD 1251
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQ--SKA 890
+ HG K + K E R++ L E E+ +V G+ ++ Q A
Sbjct: 1252 NEMQNSDDYHGMAKGMKKHEMVRVIDRLSAEKGFHED----NVVGNHGVAIQYLQIGPAA 1307
Query: 891 HNLIIGRQNVVL 902
+ + GR+ ++L
Sbjct: 1308 NQFLTGRRKLML 1319
>gi|15928520|gb|AAH14735.1| RecQ protein-like [Mus musculus]
Length = 648
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/518 (39%), Positives = 292/518 (56%), Gaps = 45/518 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW K++ + VF FRP Q E IN TM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L + +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERL--- 599
++ LTATAT V +DV + L + C+ F SFNRPNL+ + E E +
Sbjct: 248 ASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIVKL 307
Query: 600 -------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +SL+ G A YH +++P + V QWS +E+ +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNVSKCRRVLIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+++ C K CDNC K SF +K+VT + L++++K L++ + +
Sbjct: 465 VWNADACNKMCDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
K R + L + + RI+ H +++ +L E+
Sbjct: 525 AKLRVAGV----VAPALPREDLERIVAHALLQQYLKED 558
>gi|149714020|ref|XP_001502209.1| PREDICTED: ATP-dependent DNA helicase Q1 [Equus caballus]
Length = 649
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/462 (43%), Positives = 274/462 (59%), Gaps = 41/462 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FR Q E IN TMSG +VF++MPTGGGKSL
Sbjct: 63 SSPAAWNREDFPWSGKVKDVLQNVFKLRVFRLLQLETINVTMSGKEVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ +
Sbjct: 123 YQLPALCSDGFTLVICPLISLMEDQLMVLEQLGISATMLNASSSKEHVKWVHAEMVNKNS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK++KS + + +LE RI +DE HC S WGHDFRPDY+ LG+LK
Sbjct: 183 KLKLIYVTPEKISKSRMFMSRLEKAYEAGRFTRIAVDEVHCCSHWGHDFRPDYKALGVLK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----------E 593
++FPNT ++ LTATAT+ V +D + L + C+ F SFNRPNL+ + E
Sbjct: 243 RQFPNTSLIGLTATATSHVLKDAQEILCVEKCLTFTASFNRPNLYYEVRQKPSNTEDFIE 302
Query: 594 KVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
V + + Q G+ Y E VSL+ G A YH +++P + V ++WS
Sbjct: 303 DVVKLIHGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHANMEPEDKTKVHRRWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD ++ C+LYY + D
Sbjct: 363 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 423 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNMSKCRRVLIA 459
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK 808
HF E ++S C K CDNC K SF KDVT + L++++K
Sbjct: 460 QHFDEVWNSEACNKMCDNCCKEISFERKDVTAYCRDLIKILK 501
>gi|428213965|ref|YP_007087109.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
gi|428002346|gb|AFY83189.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
Length = 836
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 239/665 (35%), Positives = 370/665 (55%), Gaps = 83/665 (12%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
+LE + K FG+ SFRP QREI+ A + D+ ++MPTGGGKSL +QLPAL+ GIT+V+
Sbjct: 14 QLERSLKHFFGHDSFRPGQREIVEAALQNRDLLIVMPTGGGKSLCFQLPALLRKGITVVV 73
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL++L+QDQ+ L I TFL+ + W E + RE + KLLYV PE++ S
Sbjct: 74 SPLIALMQDQVESLKNNGIACTFLNSTLSWEESRS--RETAILQGEIKLLYVAPERLL-S 130
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
+ L ++ + A+ ++ IDEAHCVS+WGHDFRP+Y+ + +L+Q++P P++ALTATA
Sbjct: 131 ERFLPFMDLVRAQVGISGFAIDEAHCVSEWGHDFRPEYRQMQLLRQRYPEIPMMALTATA 190
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK--------VAERLQVGLSYGHFFLL 611
T V++D+ Q L L + I SFNRPNL+ + + + + ++ G + L
Sbjct: 191 TDRVRQDITQQLALRDPKIHIASFNRPNLYYEVRQKNKQSYRELVKLIRESKGSGIIYCL 250
Query: 612 KEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
V + G A YH ++ +R+ Q ++ +D+ +I AT+AFGMGINKPD
Sbjct: 251 SRRRVDEVAYKLQREGIDAIPYHAGMNDQERSSNQTRFIRDDAQVIVATIAFGMGINKPD 310
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ--GVAEQSPF 724
VRFV+H+ LP++IEGY+QE GRAGRDG+ ++C +++ Y D ++++I Q V EQ
Sbjct: 311 VRFVVHYDLPRNIEGYYQESGRAGRDGEPANCTMFFGYGDIKTIEYIIDQKTDVDEQ--- 367
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
+ L ++++Y E+ V CRR +QL +FGE+F +C+ CDN
Sbjct: 368 ----------------RIARQQLRQIINYSESTV-CRRTIQLGYFGERF-PGNCE-NCDN 408
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C +D T A K + V ++F HI++V RGS NQ V K+ HETLS +G
Sbjct: 409 CRHPNP--TEDWTIEAMKFLSCVARCKERFGMKHIIDVLRGSKNQKVLKYGHETLSTYGI 466
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G E + R L I L+EE +D Y SVLK+N+ + RQ VV+
Sbjct: 467 GLDKTADEWKMLGRSL-IHQGLVEET--TDGY----SVLKLNEGSWEVMRKQRQ-VVIAV 518
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P A +T+++ D A+ +L +DL LR LR +
Sbjct: 519 PKAPVNTEMTDRDRKKAEVEML------------------LDL---------LRSLRKEI 551
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
E + V Y +F ++TL+ ++++ P+T +E ++G+ KV +YG R + + I+
Sbjct: 552 ADE--QSVAPYMVFADSTLKLMAQQRPQTLDEFGNLSGVVGYKVDQYGDRFV----TEIR 605
Query: 1025 EFYKT 1029
E+ +T
Sbjct: 606 EYCRT 610
>gi|355716039|gb|AES05481.1| RecQ protein-like protein [Mustela putorius furo]
Length = 592
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/534 (39%), Positives = 301/534 (56%), Gaps = 46/534 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ W+ DFPW+ K++ + VF FR Q E IN TMSG +VF++MPTGGGKSL
Sbjct: 8 SSPAAWNKEDFPWSDKVKDVLQNVFKLQKFRLLQLETINVTMSGKEVFLVMPTGGGKSLC 67
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL G TLVI PL+SL++DQ+M L Q I A L+ + + + E+ +
Sbjct: 68 YQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISAXMLNASSSKEHVKWVHAEMVNKNS 127
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K KL+YVTPEK+AKS + + +LE RI +DE HC S WGHDFRPDY+ LGILK
Sbjct: 128 KLKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSHWGHDFRPDYKALGILK 187
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-------EKVAE 597
++FPNT ++ LTATAT+ V +DV + L + C F SFNRPNL+ + E + E
Sbjct: 188 RQFPNTALMGLTATATSHVLKDVQKILCVEKCFTFTASFNRPNLYYEIRQKPSNTEDLFE 247
Query: 598 RL----------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSK 646
+ Q G+ Y E VSL+ G +A YH +++P + V ++WS
Sbjct: 248 DIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHANMEPEDKTDVHRRWSA 307
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI ++ ATVAFGMGI+KPDVRFVIHHS+ KSIE Y+QE GRAGRD ++ C+LYY + D
Sbjct: 308 NEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAGRDDLKADCILYYGFGD 367
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ + N G+ + L MVSYC+N CRR+L
Sbjct: 368 IFRISSMVV-----------------MENVGQ------QKLYEMVSYCQNISKCRRVLIA 404
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E ++S C K CDNC K S K+VT + L++++K L++
Sbjct: 405 QHFDEVWNSEACNKMCDNCCKNISCERKNVTAHCRDLIKILKQAEDLNEKLTPLKLIDSW 464
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVS 880
+ + K R + L + + +I+ HL+++ +L E+ + Y ++S
Sbjct: 465 MGKGAAKLRVAGV----VPPKLPREDLEKIIAHLLLQQYLKEDYSFT-AYATIS 513
>gi|350295161|gb|EGZ76138.1| hypothetical protein NEUTE2DRAFT_97732 [Neurospora tetrasperma FGSC
2509]
Length = 1994
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/520 (40%), Positives = 299/520 (57%), Gaps = 47/520 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+ W+ + K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 921 YAWSNDVRKALKDRFRMSGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRSG 980
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
GIT+VISPL+SL+ DQ+ HL I A +G+M ++ + ++L++++ ++ +L
Sbjct: 981 KTRGITVVISPLLSLMLDQVNHLANLMIQAYAFNGDMNSEMRRMVFQKLDAEHPEHELQL 1040
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V+K+ + ++ L R+ LARIVIDEAHCVSQWGHDFRPDY+ +G +++FP
Sbjct: 1041 LYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFP 1100
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERL- 599
PV+ALTATAT +V DV L + +C F QSFNRPNL+ + ++AE +
Sbjct: 1101 GVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPNLYYEVRMKEQNLIARIAELIK 1160
Query: 600 -----QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
Q G+ Y E +L+ H KA YH SI ++ VQ +W ++ ++
Sbjct: 1161 EKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQTGQVKVV 1220
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFVIH +PKS+EGY+QE GRAGRDG+ S C LY++Y D ++
Sbjct: 1221 VATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRR 1280
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
MI+ G + A R L+ L R+VSYCE+ CRR L +FGE+
Sbjct: 1281 MIADGEG------------DYAQKERQLQM----LNRVVSYCESQHTCRREEVLRYFGEE 1324
Query: 773 FDSAHCKKTCDNCSK---IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQ 829
FD C+ CDNC KS +D T+ A +E+VK + Q + + ++ G
Sbjct: 1325 FDYRKCRDGCDNCRNGRISKSTEMRDFTEIAFAAIEVVK-SQQPITLGKLCDILMGK--- 1380
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+K+ H + G K + E RI+ L L E+
Sbjct: 1381 --RKNEHGGVCHFGIAKGSTQRELQRIVLQLNFHKALGED 1418
>gi|336465540|gb|EGO53780.1| hypothetical protein NEUTE1DRAFT_93386 [Neurospora tetrasperma FGSC
2508]
Length = 2005
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/520 (40%), Positives = 299/520 (57%), Gaps = 47/520 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+ W+ + K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 932 YAWSNDVRKALKDRFRMSGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRSG 991
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
GIT+VISPL+SL+ DQ+ HL I A +G+M ++ + ++L++++ ++ +L
Sbjct: 992 KTRGITVVISPLLSLMLDQVNHLANLMIQAYAFNGDMNSEMRRMVFQKLDAEHPEHELQL 1051
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V+K+ + ++ L R+ LARIVIDEAHCVSQWGHDFRPDY+ +G +++FP
Sbjct: 1052 LYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFP 1111
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERL- 599
PV+ALTATAT +V DV L + +C F QSFNRPNL+ + ++AE +
Sbjct: 1112 GVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPNLYYEVRMKEQNLIARIAELIK 1171
Query: 600 -----QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
Q G+ Y E +L+ H KA YH SI ++ VQ +W ++ ++
Sbjct: 1172 EKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQTGQVKVV 1231
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFVIH +PKS+EGY+QE GRAGRDG+ S C LY++Y D ++
Sbjct: 1232 VATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRR 1291
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
MI+ G + A R L+ L R+VSYCE+ CRR L +FGE+
Sbjct: 1292 MIADGEG------------DYAQKERQLQM----LNRVVSYCESQHTCRREEVLRYFGEE 1335
Query: 773 FDSAHCKKTCDNCSK---IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQ 829
FD C+ CDNC KS +D T+ A +E+VK + Q + + ++ G
Sbjct: 1336 FDYRKCRDGCDNCRNGRISKSTEMRDFTEIAFAAIEVVK-SQQPITLGKLCDILMGK--- 1391
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+K+ H + G K + E RI+ L L E+
Sbjct: 1392 --RKNEHGGVCHFGIAKGSTQRELQRIVLQLNFHKALGED 1429
>gi|4579744|dbj|BAA75085.1| DNA helicase Q1 [Mus musculus]
Length = 648
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 295/522 (56%), Gaps = 53/522 (10%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW K++ + VF FRP Q E IN TM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L + +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERL--- 599
++ LTATAT V +DV + L + C+ F SFNRPNL+ + E E +
Sbjct: 248 ASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIVKL 307
Query: 600 -------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +SL+ G A YH +++P + V QWS +E+ +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNVSKCRRVLIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLT---GQQFSSSHILEVFRGSLN 828
+++ C K CDNC K SF +K+VT + L++++K ++ + +++ + G
Sbjct: 465 VWNADACNKMCDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDTWMGK-- 522
Query: 829 QYVKKHRHETLSLHG-AGKHLAKSEASRILRHLVIEDFLMEE 869
L + G L + + RI+ H +++ +L E+
Sbjct: 523 ------GAPKLRVAGVVAPALPREDLERIVAHALLQQYLKED 558
>gi|428307721|ref|YP_007144546.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
gi|428249256|gb|AFZ15036.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
Length = 728
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 234/670 (34%), Positives = 369/670 (55%), Gaps = 88/670 (13%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
P LE K FG +FRP QR+I+ + D+ +LMPTGGGKSL +QLPAL+ PG
Sbjct: 1 MPQLASLEQALKHYFGYDNFRPGQRQIVEEALEKRDLLILMPTGGGKSLCFQLPALLKPG 60
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPE 494
+T+V+SPL+SL+QDQ+ LL I ATFL+ ++W + + RE+ K K+LYV PE
Sbjct: 61 LTVVVSPLISLMQDQVEALLDNGIGATFLNSTVDWADVRS--REVGILNGKIKILYVAPE 118
Query: 495 KVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLA 554
++ +D LE + + ++ IDEAHCVSQWGHDFRP+Y+ L L+Q++ + P+ A
Sbjct: 119 RLL-TDKFTLFLEQVQRQVGISAFAIDEAHCVSQWGHDFRPEYRQLKQLRQRYRDVPIFA 177
Query: 555 LTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFF-LLKE 613
LTATAT V+ED++Q L L I SFNRPNL+ + + L+ +Y L+++
Sbjct: 178 LTATATNRVREDIIQQLALRQPSIHISSFNRPNLYYEVQ-----LKQKQAYLQLLKLIRQ 232
Query: 614 F------YVVSLECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATV 656
+ Y +S + AF YH + +RA+ Q ++ +D++ ++ AT+
Sbjct: 233 YEGSGIVYCLSRRHVDEVAFRLQKDGISALPYHAGMTDEERAYNQTRFIRDDVQVMVATI 292
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGINKPDVRFVIH+ LP+++EGY+QE GRAGRDG+ + C L + D + ++I Q
Sbjct: 293 AFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPARCTLLFGTGDLRTINYLIEQ 352
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
+ A RV + L +M+ Y E DCRR +QL +FGE+F +
Sbjct: 353 K--------------SDAQEQRVAR---QQLQKMIDYAEG-TDCRRKIQLSYFGERF-AG 393
Query: 777 HCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+C CDNC K E+D T A K + V ++F HI++V RGS + ++++ H
Sbjct: 394 NC-DNCDNCRDPKP--EEDWTIEAMKFLSCVARCQERFGMIHIIDVLRGSARKKIEQYGH 450
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL-II 895
LS +G GK + E + R L+ + + E +D Y +LK+N AH+ ++
Sbjct: 451 HLLSTYGIGKDKSVEEWKMLGRSLLHQGLVDE---TTDGY----RILKLN---AHSWEVM 500
Query: 896 GRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYS 955
RQ V P K + + K +P +D+ + L+
Sbjct: 501 KRQREVY--------------IAVPKKHTTDTAKYNP----------KAIDVEI---LFH 533
Query: 956 SLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRL 1015
LR LR + E + + Y +F +++L+ ++++ P+T +E +I+G+G K+++YG R
Sbjct: 534 RLRSLRKQVADE--QSIAPYVVFADSSLKLMAQQQPQTLDEFAQISGVGAHKLAQYGERF 591
Query: 1016 LETIESTIKE 1025
++ I++ +E
Sbjct: 592 VDEIKTHRQE 601
>gi|408399479|gb|EKJ78580.1| hypothetical protein FPSE_01246 [Fusarium pseudograminearum CS3096]
Length = 1673
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/518 (39%), Positives = 294/518 (56%), Gaps = 42/518 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ +++ K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 815 YPWSPEVQRMLKDRFRMKGFRCNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTG 874
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
G+T+V+SPL+SL+QDQ+ H+ I A +G +++++ N ++ +L
Sbjct: 875 KTRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGECSAEYKRQVMSAFNERSPEHFLEL 934
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V+K+ L++L+ + AR+VIDEAHCVSQWGHDFRPDY+ LG ++QK+P
Sbjct: 935 LYVTPEMVSKNANFNNGLQTLHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQKYP 994
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKVAER 598
PV+ALTATAT +V D+ LG+ +C F QSFNRPNL+ + E +A
Sbjct: 995 GVPVMALTATATKNVIVDIRHNLGMDDCQTFSQSFNRPNLYYEVRPKSTGEKTIESIASL 1054
Query: 599 LQ------VGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+Q G+ Y E SL + G A YH DP ++ VQ W + ++ +
Sbjct: 1055 IQSNYANKSGIVYTISRKSAEKVAESLSDSGITARHYHAGCDPQEKVDVQNAWQRGQVKV 1114
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ AT+AFGMGI+KPDVRFVIHH +PKS+EGY+QE GRAGRDG S C+L+Y +D +K
Sbjct: 1115 VVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQETGRAGRDGNPSDCILFYGKADIRVLK 1174
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
+I+ G S E L R+ ++C+N DCRR L +FGE
Sbjct: 1175 KLIADG----------------DGSHEQKERQMSMLNRVTAFCDNKSDCRRTEILRYFGE 1218
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
F A C K+CDNC +F ++D ++ A +++++ + ++ ++ G +Y
Sbjct: 1219 DFSPAECHKSCDNCKAGLTFEQQDFSEYAIAAIKVIQAQ-HRITAVQCSDILLG--KKYP 1275
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + HG K L K E R++ L E E+
Sbjct: 1276 QNEAELSEEWHGMAKGLKKHELIRVIDKLSAEKAFNED 1313
>gi|119622512|gb|EAX02107.1| Bloom syndrome, isoform CRA_a [Homo sapiens]
Length = 1392
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 250/691 (36%), Positives = 361/691 (52%), Gaps = 125/691 (18%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 655 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 714
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +I A
Sbjct: 715 PACVSPGVTVVISPLRSLIVDQVQKLTSLDICA--------------------------- 747
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 748 -----------SNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 796
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 797 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 856
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D
Sbjct: 857 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQ 916
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 917 VICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 976
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 977 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1021
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVTD K +V V K G
Sbjct: 1022 ENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGMRNIKHVGPS 1081
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1082 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1135
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA ++ G N+ + F NS+ + K AK S
Sbjct: 1136 INANDQAIAYVMLGN--KAQTVLNG--NLKVDFMETENSSSVKKQKALVAKVS------- 1184
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1185 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1227
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1228 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1258
>gi|164423365|ref|XP_964030.2| hypothetical protein NCU08598 [Neurospora crassa OR74A]
gi|157070060|gb|EAA34794.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1955
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/520 (40%), Positives = 298/520 (57%), Gaps = 47/520 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+ W+ + K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 887 YAWSNDVRKALKDRFRMSGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRSG 946
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
GIT+VISPL+SL+ DQ+ HL I A +G+M ++ + ++L++++ ++ +L
Sbjct: 947 KTRGITVVISPLLSLMLDQVNHLANLMIQAYAFNGDMNSEMRRMVFQKLDAEHPEHELQL 1006
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V+K+ + ++ L R+ LARIVIDEAHCVSQWGHDFRPDY+ +G +++FP
Sbjct: 1007 LYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFP 1066
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERL- 599
PV+ALTATAT +V DV L + +C F QSFNRPNL+ + ++AE +
Sbjct: 1067 GVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPNLYYEVRMKEQNLIARIAELIK 1126
Query: 600 -----QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
Q G+ Y E +L+ H KA YH SI ++ VQ +W + ++
Sbjct: 1127 EKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQTGRVKVV 1186
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFVIH +PKS+EGY+QE GRAGRDG+ S C LY++Y D ++
Sbjct: 1187 VATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRR 1246
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
MI+ G + A R L+ L R+VSYCE+ CRR L +FGE+
Sbjct: 1247 MIADGEG------------DYAQKERQLQM----LNRVVSYCESQHTCRREEVLRYFGEE 1290
Query: 773 FDSAHCKKTCDNCSK---IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQ 829
FD C+ CDNC KS +D T+ A +E+VK + Q + + ++ G
Sbjct: 1291 FDYRKCRDGCDNCRNGRISKSTEMRDFTEIAFAAIEVVK-SQQPITLGKLCDILMGK--- 1346
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+K+ H + G K + E RI+ L L E+
Sbjct: 1347 --RKNEHGGVCHFGIAKGSTQRELQRIVLQLNFHKALGED 1384
>gi|110625690|ref|NP_075529.2| ATP-dependent DNA helicase Q1 isoform 1 [Mus musculus]
gi|341941960|sp|Q9Z129.2|RECQ1_MOUSE RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|74215762|dbj|BAE23422.1| unnamed protein product [Mus musculus]
gi|74216639|dbj|BAE37751.1| unnamed protein product [Mus musculus]
gi|148678691|gb|EDL10638.1| RecQ protein-like, isoform CRA_b [Mus musculus]
Length = 648
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/518 (39%), Positives = 291/518 (56%), Gaps = 45/518 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW K++ + VF FRP Q E IN TM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERL--- 599
++ LTATAT V +DV + L + C+ F SFNRPNL+ + E E +
Sbjct: 248 ASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIVKL 307
Query: 600 -------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +SL+ G A YH +++P + V QWS +E+ +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNVSKCRRVLIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+++ C K CDNC K SF +K+VT + L++++K L++ + +
Sbjct: 465 VWNADACNKMCDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
K R + L + + RI+ H +++ +L E+
Sbjct: 525 AKLRVAGV----VAPALPREDLERIVAHALLQQYLKED 558
>gi|6934278|gb|AAF31695.1|AF205407_1 QDE3 protein [Neurospora crassa]
Length = 1955
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/520 (40%), Positives = 298/520 (57%), Gaps = 47/520 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+ W+ + K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 887 YAWSNDVRKALKDRFRMSGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRSG 946
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
GIT+VISPL+SL+ DQ+ HL I A +G+M ++ + ++L++++ ++ +L
Sbjct: 947 KTRGITVVISPLLSLMLDQVNHLANLMIQAYAFNGDMNSEMRRMVFQKLDAEHPEHELQL 1006
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V+K+ + ++ L R+ LARIVIDEAHCVSQWGHDFRPDY+ +G +++FP
Sbjct: 1007 LYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFP 1066
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERL- 599
PV+ALTATAT +V DV L + +C F QSFNRPNL+ + ++AE +
Sbjct: 1067 GVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPNLYYEVRMKEQNLIARIAELIK 1126
Query: 600 -----QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
Q G+ Y E +L+ H KA YH SI ++ VQ +W + ++
Sbjct: 1127 EKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYHASITTDEKISVQHEWQTGRVKVV 1186
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFVIH +PKS+EGY+QE GRAGRDG+ S C LY++Y D ++
Sbjct: 1187 VATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRR 1246
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
MI+ G + A R L+ L R+VSYCE+ CRR L +FGE+
Sbjct: 1247 MIADGEG------------DYAQKERQLQM----LNRVVSYCESQHTCRREEVLRYFGEE 1290
Query: 773 FDSAHCKKTCDNCSK---IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQ 829
FD C+ CDNC KS +D T+ A +E+VK + Q + + ++ G
Sbjct: 1291 FDYRKCRDGCDNCRNGRISKSTEMRDFTEIAFAAIEVVK-SQQPITLGKLCDILMGK--- 1346
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+K+ H + G K + E RI+ L L E+
Sbjct: 1347 --RKNEHGGVCHFGIAKGSTQRELQRIVLQLNFHKALGED 1384
>gi|74203917|dbj|BAE28550.1| unnamed protein product [Mus musculus]
Length = 634
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/518 (39%), Positives = 292/518 (56%), Gaps = 45/518 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW K++ + VF FRP Q E IN TM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L + +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERL--- 599
++ LTATAT V +DV + L + C+ F SFNRPNL+ + E E +
Sbjct: 248 ASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIVKL 307
Query: 600 -------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +SL+ G A YH +++P + V QWS +E+ +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNVSKCRRVLIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+++ C K CDNC K SF +K+VT + L++++K L++ + +
Sbjct: 465 VWNADACNKMCDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
K R + L + + RI+ H +++ +L E+
Sbjct: 525 AKLRVAGV----VAPALPREDLERIVAHALLQQYLKED 558
>gi|164655522|ref|XP_001728890.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
gi|159102778|gb|EDP41676.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
Length = 841
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 342/614 (55%), Gaps = 59/614 (9%)
Query: 371 SSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPAL 430
S+ +PW ++ + +F FR +Q E INAT+SG DVF LMPTGGGKSL YQLP+
Sbjct: 172 STLFYPWDDQVRHSLHHIFLLKEFRADQLEAINATLSGRDVFCLMPTGGGKSLCYQLPST 231
Query: 431 IC----PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY 486
I G+T+V+SPL++LI +Q+ LL+ ++PA ++G+M +++ EL
Sbjct: 232 ITLGRTNGLTVVVSPLLALIHNQVKSLLRKDVPAMAITGDMSDADRRYASSELLRKNINV 291
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
+LLYVTPE ++KS + + L+ L LAR VIDEAHCV QWGHDFRPDY L +L++
Sbjct: 292 RLLYVTPEFISKSRLASQLLQHLYQTHQLARFVIDEAHCVDQWGHDFRPDYVRLNLLRKT 351
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDC---------EKVA 596
+P P++ALTATA + + Q+LG+ N ++ RQSFNRPNL + C E +A
Sbjct: 352 YPTVPIMALTATARIDTVQSIQQSLGMRNALVLRQSFNRPNLTYKVCPKMRGSATLETIA 411
Query: 597 ERLQ------VGLSYGHFFLLKEFYVVSLECGHK----AAFYHGSIDPAQRAFVQKQWSK 646
+Q G+ Y ++ VS + G+K A +H ++ + +Q+ W
Sbjct: 412 AIIQKHHANECGIIY--CLSRRDCENVSTDLGNKYGIQARHFHAGLNIEDKLRIQEGWEA 469
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+I AT+AFGMGI+K DVRFVIHHS+PKS+EGY+QE GRAGRDG+ S C+L++S D
Sbjct: 470 GTFKVIVATIAFGMGIDKADVRFVIHHSMPKSLEGYYQETGRAGRDGKWSDCILFWSMED 529
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
+++ MI ++SP + ++L ++ ++CE+ +CRR L
Sbjct: 530 SRKLEAMI-----DESPDASAEQK----------RLQIKSLYQVRTFCESLTECRRTNIL 574
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQ---------FSSS 817
+FGEKFD C +CDNC + + D+T +AK +VKL QQ F+
Sbjct: 575 KYFGEKFDPKLCHASCDNCQRSPAHC-VDMTTSAKDFANMVKLITQQRQQRNSPPRFTRI 633
Query: 818 HILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYG 877
H + VFRGS + VK H H HG+G H + + R++ HL+ + L E K+
Sbjct: 634 HFVNVFRGSQRKEVKDHGHHHNLYHGSGAHYSDDQVRRLVDHLLNQKVLAEYSSKTRFQR 693
Query: 878 SVSSVLKVNQSKAHNLIIGRQNVVLRFPS--AINSTKLSKSDVTPAKGSLLSGKLSPSRN 935
+ L++ + A L+ G +V + PS ++ + S+ T A L G S R
Sbjct: 694 FANYYLQLGPN-ASKLLQGHLSVRVDMPSNPSVGAASTSRRSNTSAA---LHGPTS-VRA 748
Query: 936 DTPSQPQNEVDLNL 949
++PS +++DL
Sbjct: 749 ESPSS-SDDMDLTF 761
>gi|46107336|ref|XP_380727.1| hypothetical protein FG00551.1 [Gibberella zeae PH-1]
Length = 1672
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/518 (39%), Positives = 294/518 (56%), Gaps = 42/518 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
+PW+ +++ K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 814 YPWSPEVQRMLKDRFRMKGFRCNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTG 873
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
G+T+V+SPL+SL+QDQ+ H+ I A +G +++++ N ++ +L
Sbjct: 874 KTRGVTIVVSPLLSLMQDQVDHMKALGIQAVAFNGECSAEYKRQVMSAFNERSPEHFLEL 933
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V+K+ L++L+ + AR+VIDEAHCVSQWGHDFRPDY+ LG ++QK+P
Sbjct: 934 LYVTPEMVSKNANFNNGLQTLHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQKYP 993
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKVAER 598
PV+ALTATAT +V D+ LG+ +C F QSFNRPNL+ + E +A
Sbjct: 994 GVPVMALTATATKNVIVDIRHNLGMDDCQTFSQSFNRPNLYYEVRPKSTGEKTIESIASL 1053
Query: 599 LQ------VGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+Q G+ Y E SL + G A YH DP ++ VQ W + ++ +
Sbjct: 1054 IQSNYANKSGIVYTISRKSAEKVAESLSDSGITARHYHAGCDPQEKVDVQNAWQRGQVKV 1113
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ AT+AFGMGI+KPDVRFVIHH +PKS+EGY+QE GRAGRDG S C+L+Y +D +K
Sbjct: 1114 VVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQETGRAGRDGNPSDCILFYGKADIRVLK 1173
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
+I+ G S E L R+ ++C+N DCRR L +FGE
Sbjct: 1174 KLIADG----------------DGSHEQKERQMSMLNRVTAFCDNKSDCRRTEILRYFGE 1217
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
F A C K+CDNC +F ++D ++ A +++++ + ++ ++ G +Y
Sbjct: 1218 DFSPAECHKSCDNCKAGLTFEQQDFSEYAIAAIKVIQAQ-HRITAVQCSDILLG--KKYP 1274
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ + HG K L K E R++ L E E+
Sbjct: 1275 QNEAELSEEWHGMAKGLKKHELIRVIDKLSAEKAFNED 1312
>gi|148678692|gb|EDL10639.1| RecQ protein-like, isoform CRA_c [Mus musculus]
Length = 662
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/518 (39%), Positives = 291/518 (56%), Gaps = 45/518 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW K++ + VF FRP Q E IN TM+ D+F++MPTGGGKSL YQLPA
Sbjct: 82 WNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPA 141
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 142 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLI 201
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 202 YVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 261
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERL--- 599
++ LTATAT V +DV + L + C+ F SFNRPNL+ + E E +
Sbjct: 262 ASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIVKL 321
Query: 600 -------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +SL+ G A YH +++P + V QWS +E+ +
Sbjct: 322 INGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANELQV 381
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 382 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRIS 441
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 442 SMVV-----------------MENVGQ------QKLYEMVSYCQNVSKCRRVLIAQHFDE 478
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+++ C K CDNC K SF +K+VT + L++++K L++ + +
Sbjct: 479 VWNADACNKMCDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGA 538
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
K R + L + + RI+ H +++ +L E+
Sbjct: 539 AKLRVAGV----VAPALPREDLERIVAHALLQQYLKED 572
>gi|365987708|ref|XP_003670685.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
gi|343769456|emb|CCD25442.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
Length = 1110
Score = 378 bits (971), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/517 (38%), Positives = 301/517 (58%), Gaps = 39/517 (7%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI-- 431
++ WT+++ + F FRPNQ E IN+T+ G DVFVLMPTGGGKSL YQLPA++
Sbjct: 455 EYRWTEEVYYRLRHTFKLPGFRPNQLEAINSTLIGKDVFVLMPTGGGKSLCYQLPAIVKS 514
Query: 432 --CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
G ++VISPL+SL+QDQ+ HLL NI A+ +S ++++ + K L+
Sbjct: 515 GKTKGTSIVISPLISLMQDQVEHLLDLNIKASMISSKGTTQQRKQTFSLFSQG--KLDLI 572
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
Y++PE +A S R ++ L LARI++DEAHCVS WGHDFRPDY+ L K ++P
Sbjct: 573 YISPEMIASSKQCKRVIKKLYQEGNLARIIVDEAHCVSSWGHDFRPDYKELYFFKSEYPK 632
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERL----- 599
P++ LTATA V++D+V L L N + +QSFNR NL+ D + + E +
Sbjct: 633 IPMMVLTATANEHVRQDIVTNLRLRNPVFLKQSFNRTNLFYEVLRKDKDSIDEMIDAIKY 692
Query: 600 ----QVGLSYGHFFLLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICA 654
Q G+ Y H E + L+ + +YH +DP +R +Q+ W ++++ +ICA
Sbjct: 693 HFTEQSGIIYCHSKNSCEKVALQLQNNQIRCGYYHAGMDPDERMMIQRDWQRNKLQVICA 752
Query: 655 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI 714
TVAFGMGI+K DVRF+ H ++P+++EGY+QE GRAGRDG+ S C+ YYS D ++ MI
Sbjct: 753 TVAFGMGIDKSDVRFIYHFTVPRTLEGYYQETGRAGRDGKPSYCIGYYSMKDVRAIQKMI 812
Query: 715 SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD 774
+ + + R E + + L ++ YCEN +CRR L L +F E+FD
Sbjct: 813 QKDSS-------------LDKISR--EKHFDKLQEVMKYCENIKECRRKLVLSYFNEEFD 857
Query: 775 SAHCKKTCDNCSKIKSFIE--KDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYV 831
C + CDNC K + + +D+T AK ++ LV+ + + +S + +F+GS +
Sbjct: 858 RNLCHENCDNCKKCQDVVSHMEDITMIAKDVITLVQSIENETVTSIYCQNLFKGSRTAKI 917
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
+ H+ L HG GK + K++ +I HL+ E L E
Sbjct: 918 IQAGHDNLEKHGTGKSINKAKIEKIFFHLISERILEE 954
>gi|4579746|dbj|BAA75086.1| DNA helicase Q1 [Mus musculus]
Length = 631
Score = 378 bits (971), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 295/522 (56%), Gaps = 53/522 (10%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW K++ + VF FRP Q E IN TM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L + +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERL--- 599
++ LTATAT V +DV + L + C+ F SFNRPNL+ + E E +
Sbjct: 248 ASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIVKL 307
Query: 600 -------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +SL+ G A YH +++P + V QWS +E+ +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNVSKCRRVLIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLT---GQQFSSSHILEVFRGSLN 828
+++ C K CDNC K SF +K+VT + L++++K ++ + +++ + G
Sbjct: 465 VWNADACNKMCDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDTWMGK-- 522
Query: 829 QYVKKHRHETLSLHG-AGKHLAKSEASRILRHLVIEDFLMEE 869
L + G L + + RI+ H +++ +L E+
Sbjct: 523 ------GAPKLRVAGVVAPALPREDLERIVAHALLQQYLKED 558
>gi|148678690|gb|EDL10637.1| RecQ protein-like, isoform CRA_a [Mus musculus]
Length = 645
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/518 (39%), Positives = 291/518 (56%), Gaps = 45/518 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW K++ + VF FRP Q E IN TM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERL--- 599
++ LTATAT V +DV + L + C+ F SFNRPNL+ + E E +
Sbjct: 248 ASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIVKL 307
Query: 600 -------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +SL+ G A YH +++P + V QWS +E+ +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNVSKCRRVLIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+++ C K CDNC K SF +K+VT + L++++K L++ + +
Sbjct: 465 VWNADACNKMCDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
K R + L + + RI+ H +++ +L E+
Sbjct: 525 AKLRVAGV----VAPALPREDLERIVAHALLQQYLKED 558
>gi|113476788|ref|YP_722849.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
gi|110167836|gb|ABG52376.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
Length = 731
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 240/656 (36%), Positives = 365/656 (55%), Gaps = 79/656 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE + K FG SFRP Q++II + D+ ++MPTGGGKSL +Q+PAL+ PG+T+V+S
Sbjct: 14 LEQHLKNYFGYDSFRPGQKQIIQTALQQKDLLIIMPTGGGKSLCFQMPALLKPGLTIVVS 73
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL+SL+QDQ+ L I ATFL+ ++ TE + R + K KLLYV PE++ S+
Sbjct: 74 PLISLMQDQVESLKDNGIAATFLNSTLDLTETRR--RSTDIILGKIKLLYVAPERLL-SE 130
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L LE +++++ ++ IDEAHCVS+WGHDFRP+Y+ L +L++ +P+ P++ALTATAT
Sbjct: 131 KFLEFLELISSQQGISTFAIDEAHCVSEWGHDFRPEYRQLKLLRETYPDVPIMALTATAT 190
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK-------VAERLQV-------GLSYG 606
V+ED+ L L I SF R NL+ + + AE LQ+ G+ Y
Sbjct: 191 KRVREDITTQLNLQKPYIHIASFFRSNLYYEVRQKTSAKNTFAEILQIIRTIGGSGIVYC 250
Query: 607 HFFLLKEFYVVSLECGHKAAF-YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKP 665
+ + L + +A YH + +R Q ++ +D++++I ATVAFGMGI+KP
Sbjct: 251 NSRKRVDEIAYKLRQNNVSALAYHAGMTDEERTTNQTKFIRDDVDVIVATVAFGMGIDKP 310
Query: 666 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFT 725
DVRFVIH+ L K+IEGY+QE GR+GRDG+ + C+L++SY D ++++I Q V EQ
Sbjct: 311 DVRFVIHYDLSKNIEGYYQETGRSGRDGEPAQCILFFSYGDKRSIEYLIGQKVDEQEQ-- 368
Query: 726 PGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC 785
R+ E + L R+++Y E +CR + L +FGE F +C CDNC
Sbjct: 369 ------------RIAE---QQLRRIINYAEA-TECRHRVLLSYFGEDF-PGNC-GNCDNC 410
Query: 786 SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
K +D T A K + V T ++F ++I++V RGS +Q + RH+ LS +G G
Sbjct: 411 KYPKPI--EDWTIEAMKFLSCVARTKERFGMTYIIDVLRGSKSQKILDRRHDQLSTYGIG 468
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
K A E + + L+ + LM+E +D Y SVLK+NQ ++GR+ V
Sbjct: 469 KDRATEEWKNLAKSLLHQG-LMDET--ADGY----SVLKLNQHSWE--VMGRKTKV---K 516
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
AI K + SL VD +L+ LR LR +
Sbjct: 517 IAIE----KKRQIEKTTTSL------------------AVD---EKRLFEELRALRKRMA 551
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
E + + IF + TLQ ++K+ P+T +E + I+G+G K KYG + +E I++
Sbjct: 552 DE--QSIPPTTIFQDHTLQEMAKKRPQTLDEFIRISGVGNWKRDKYGKKFIEKIKN 605
>gi|354482050|ref|XP_003503213.1| PREDICTED: ATP-dependent DNA helicase Q1 [Cricetulus griseus]
gi|344244467|gb|EGW00571.1| ATP-dependent DNA helicase Q1 [Cricetulus griseus]
Length = 648
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 309/551 (56%), Gaps = 56/551 (10%)
Query: 347 VEREPFIPKIIKVNYIEGSNDQ----------KWSSWDFPWTKKLEANNKKVFGNHSFRP 396
V+++ + K IK +EGS+ + +W+ DFPW+ K++ + V FRP
Sbjct: 36 VQKKAVLTKKIK-QCLEGSDAEASSDCDSSPAEWNKEDFPWSGKVKDVLQNVLKLQKFRP 94
Query: 397 NQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQA 456
Q E +N TM+ D+F++MPTGGGKSL YQLPAL G TLVI PL+SL++DQ+M L Q
Sbjct: 95 LQLETVNVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQL 154
Query: 457 NIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLA 516
I AT L+ + + + E+ + + KL+YVTPEK+AKS + + +LE L
Sbjct: 155 GISATMLNASSSKEHVKWVHAEMVNKNSQLKLVYVTPEKIAKSKMFMSRLEKAYEAGRLT 214
Query: 517 RIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNC 576
RI +DE HC SQWGHDFRPDY+ LGILK++FPNT ++ LTATAT V +D + L + C
Sbjct: 215 RIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNTSLIGLTATATNHVLKDAQKILCVEKC 274
Query: 577 IIFRQSFNRPNLWMDC-----------EKVAERL------QVGLSYGHFFLLKEFYVVSL 619
+ F SFNRPNL+ + E + + + + G+ Y E +SL
Sbjct: 275 LTFTASFNRPNLYYEVRQKPPNAEDFIEDIVKLINGRYKGRSGIIYCFSQKDSEQVTISL 334
Query: 620 E-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKS 678
+ G +A YH +++P + V QWS +E+ ++ ATVAFGMGI+KPDVRFVIHHS+ KS
Sbjct: 335 QKLGIRAGTYHANMEPEDKTRVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKS 394
Query: 679 IEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGR 738
+E Y+QE GRAGRD R+ C+LYY + D R+ M+ + N G+
Sbjct: 395 MENYYQESGRAGRDDSRADCILYYGFGDIFRISSMVV-----------------MENVGQ 437
Query: 739 VLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTD 798
+ L MVSYC+N CRR+L HF E +++ C K CDNC K +K++T
Sbjct: 438 ------QKLYEMVSYCQNISKCRRVLIAQHFDEVWNADACNKMCDNCCKDLLLEKKNITQ 491
Query: 799 TAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILR 858
+ LV+++K + L++ + + K R + L + + +I+
Sbjct: 492 HCRDLVKILKQAEELNEKLTPLKLMDAWMGKGAPKLRVAGV----VAPVLPREDLEKIIA 547
Query: 859 HLVIEDFLMEE 869
H +++ +L E+
Sbjct: 548 HALLQQYLKED 558
>gi|440636643|gb|ELR06562.1| hypothetical protein GMDG_08035 [Geomyces destructans 20631-21]
Length = 1823
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/662 (35%), Positives = 345/662 (52%), Gaps = 79/662 (11%)
Query: 300 QPAVLKIDPIRFDTQVHLYNESEGYGNWNSSS-----------------VSFS-SVDRLG 341
QPA+++ P RFD +E + GN++ + + F+ S DR
Sbjct: 756 QPAMMQSAPSRFDCPEDFEDEDDMLGNFDPITRNMDEEDYGDFDDDDDMIEFAESWDRGE 815
Query: 342 VSSYPVERE--------PFIPKIIKVNYIEGSNDQKWSS-------WDFPWTKKLEANNK 386
SS V + P P + + S D S W+ +++
Sbjct: 816 ASSGRVAADTHEVSMPPPSTPSASRRPKLSSSKDMSLSVNAGSAALMKHKWSGEVKQKLT 875
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPL 442
F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA+I G+T+VISPL
Sbjct: 876 ARFHLRGFRQNQLEAINATLGGKDTFVLMPTGGGKSLCYQLPAIIRSGTTRGVTIVISPL 935
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK--YKLLYVTPEKVAKSD 500
+SL+QDQ+ HL + I A ++ + + + ++ L + +LLYVTPE V KS+
Sbjct: 936 LSLMQDQVDHLQKLGIQAFVINSEVTQSYKNMVMSGLEERIPEDFVELLYVTPEMVTKSE 995
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+L + SL+ R LARIVIDEAHCVSQWGHDFRPDY+ LG ++ +FP P++ALTATAT
Sbjct: 996 AILSRFASLHRRHKLARIVIDEAHCVSQWGHDFRPDYKELGEVRARFPGVPIMALTATAT 1055
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERL----------QVGLS 604
+VK DV+ L + C + QSFNRPNL + E++ + + Q G+
Sbjct: 1056 ENVKVDVIHNLAMEGCQQYTQSFNRPNLTYEVRPKPKHEELMKSIVEIITKKYKGQTGII 1115
Query: 605 YGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y E L + KA YH ++ P ++ VQ+ W + +I AT+AFGMGI
Sbjct: 1116 YALSRKNCEKVADELSTRYNIKACHYHAALKPIEKKRVQQDWQAGKWQVIVATIAFGMGI 1175
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
+K +VRFVIH ++PKS+EGY+QE GRAGRDG+ S C LYY Y D ++ I G
Sbjct: 1176 DKANVRFVIHQTMPKSLEGYYQETGRAGRDGKLSGCYLYYGYQDTTVLRKFIEDGDG--- 1232
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
H + + S L RM +CEN VDCRR+ L +FGE+F C TC
Sbjct: 1233 ----SHEQKDRQRS---------MLNRMSQFCENRVDCRRVEVLAYFGERFQKEDCNGTC 1279
Query: 783 DNCSKIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKK---HRHET 838
DNC+ + D + + + +V+ L + + + ++ RG+ K +
Sbjct: 1280 DNCNSTSVYEAVDRSKETRIALSIVRQLHTENLTLVNYADIMRGNRGNKSAKIVSLNLDK 1339
Query: 839 LSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQ 898
+SL G KHL K+E +L LV E+ L +EV + + G ++ LK+ +S + + GR+
Sbjct: 1340 MSLFGQVKHLHKNEVEALLYRLVSENAL-KEVNQINKAGFATAYLKLGKS-FQDFLTGRR 1397
Query: 899 NV 900
+
Sbjct: 1398 KI 1399
>gi|302883319|ref|XP_003040560.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
gi|256721447|gb|EEU34847.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 309/552 (55%), Gaps = 48/552 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI---- 431
PW+ +++ K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 62 PWSPEVQRMLKDRFRMKRFRHNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTGK 121
Query: 432 CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS----DYCKYK 487
G+T+V+SPL+SL+QDQ+ H+ I A +G +++++ DY +
Sbjct: 122 TQGVTIVVSPLLSLMQDQVDHMKSLGIQAVAFNGECSAEYKRQVMTAFKERSPEDYIE-- 179
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPE V+K+ + +L+ + LARIVIDEAHCVSQWGHDFRPDY+ LG ++Q++
Sbjct: 180 LLYVTPEMVSKNITFNNGMRTLHDKGKLARIVIDEAHCVSQWGHDFRPDYKTLGQVRQRY 239
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKVAE 597
P PV+ALTATAT +V D+ LG+ NC F QSFNRPNL+ + +++A
Sbjct: 240 PGVPVMALTATATQNVIVDIRHNLGMDNCQTFSQSFNRPNLYYEVRGKTTNAKCMDEIAS 299
Query: 598 RL------QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
+ Q G+ Y E SL + G A YH +DP ++A VQ W + +I
Sbjct: 300 LIKSKYANQSGIVYTVSRKNAEKVAESLSDQGITARHYHAGVDPQEKAEVQIAWQQGQIK 359
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
II AT+AFGMGI+KPDVRFVIHH LPKS+EGY+QE GRAGRDG S C+L+Y D +
Sbjct: 360 IIVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGDPSDCILFYGKQDIRIL 419
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I++G + E L R+ ++C+N DCRR L +FG
Sbjct: 420 KKLIAEGDGNKEQ----------------KERQMSMLNRVTAFCDNKSDCRRAEILRYFG 463
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQY 830
E F +A C KTCDNC F ++D + A + +V+ ++ ++ ++ G +Y
Sbjct: 464 EDFSAAQCGKTCDNCKAGLIFEQQDFSKYAIAAIRVVQAQ-RRITAVQCADILIG--RKY 520
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
+ +G K L K E R+L L+ E E + + +G LK+ S
Sbjct: 521 PPYEARRSDDWYGMAKSLKKHELVRVLDKLLAEKAFHENNQVGN-HGMAIQYLKLG-STY 578
Query: 891 HNLIIGRQNVVL 902
H + G++ ++L
Sbjct: 579 HLFLSGQRKLML 590
>gi|374587401|ref|ZP_09660493.1| ATP-dependent DNA helicase RecQ [Leptonema illini DSM 21528]
gi|373876262|gb|EHQ08256.1| ATP-dependent DNA helicase RecQ [Leptonema illini DSM 21528]
Length = 617
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/681 (34%), Positives = 359/681 (52%), Gaps = 81/681 (11%)
Query: 357 IKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMP 416
+K N IEG + + K+ + K+VFG SFRP QRE+I+ +S D ++P
Sbjct: 3 LKRNGIEGPIAESQAVI----MKRASSILKEVFGYDSFRPFQREVIDNVLSRRDTLAVLP 58
Query: 417 TGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEIL 476
TG GKSL YQ+PAL+ +++V+SPL++L+ DQ+ L A +PA L+ ++ E Q +
Sbjct: 59 TGAGKSLCYQIPALVFEKLSVVVSPLIALMNDQVQQLRAAGVPAVMLNSSLSPQEYQRNI 118
Query: 477 RELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPD 536
L ++LYV PE + V L A L + IDEAHC+S WGHDFRP+
Sbjct: 119 DALQKG--DARILYVAPETLLSPRV-----TDLLASLPLDLLTIDEAHCISDWGHDFRPE 171
Query: 537 YQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVA 596
Y+ + ++++FP LALTATAT V+ D++ ALGL F F+RPNL+++
Sbjct: 172 YRQIAAVRRRFPRAVCLALTATATERVRHDILTALGLDEAAQFVAGFDRPNLFIEVLPKQ 231
Query: 597 ERLQVGLSY--------GHFFLLKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQ 643
L L + G + V L G A YH + A+RA Q+
Sbjct: 232 NALTQTLRFLEERRDQAGIIYCFSRRQVDDLAAALVQKGFSARPYHAGLGDAERAANQEA 291
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
+ +D+I II AT+AFGMGINKP+VRFVIH+ LPKSIEGY+QE GRAGRDG S C+L YS
Sbjct: 292 FLRDDIQIIVATIAFGMGINKPNVRFVIHYDLPKSIEGYYQEIGRAGRDGLPSHCLLLYS 351
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
Y D +++H I Q ++ E+L +V + E CRR+
Sbjct: 352 YGDVAKLRHFIDQKEEDERLVA------------------LEHLDALVRFAEQHAGCRRI 393
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVF 823
L +FGE+ S C + CDNC+ + + D+T+ A+KL+ VK TG++F + H+++V
Sbjct: 394 PLLRYFGEEPTSTRCDR-CDNCTSPTATL-VDMTENAQKLLSCVKRTGERFGAGHVIDVL 451
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVL 883
RGS N+ V ++RH+ LS +G G +L + + + R LV +L++E G ++
Sbjct: 452 RGSKNEKVLRNRHQDLSTYGIGTNLTAIQWNHVARQLVRHGYLVQE-------GEFRTL- 503
Query: 884 KVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQN 943
+ +L I +++ R P + + ++ V + +L SG
Sbjct: 504 -----RLSDLAI--RSLRERAPITLEAMPQGEAPVRRSPSTLASG--------------- 541
Query: 944 EVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGI 1003
+ L+ LR R L A G+ Y +F + TL ++ +P+++EELL I+G+
Sbjct: 542 -----MDETLFGLLRQRRKELADAA--GIPPYIVFSDRTLVEMASALPQSDEELLSISGV 594
Query: 1004 GKAKVSKYGVRLLETIESTIK 1024
G+ K+ +YG L I +K
Sbjct: 595 GQVKLERYGEEFLGVIRDYVK 615
>gi|426380348|ref|XP_004056835.1| PREDICTED: Bloom syndrome protein [Gorilla gorilla gorilla]
Length = 1377
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 249/691 (36%), Positives = 361/691 (52%), Gaps = 125/691 (18%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S FP TK++ K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 640 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 699
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +I A
Sbjct: 700 PACVSPGVTIVISPLRSLIVDQVQKLTSLDICA--------------------------- 732
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+QKF
Sbjct: 733 -----------SNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKF 781
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 782 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEW 841
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ++W ++D
Sbjct: 842 IRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQ 901
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+L+Y+Y D R+
Sbjct: 902 VICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRL 961
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
K +I + E+ H R ET+ NL MV YCEN +CRR+ L +FG
Sbjct: 962 KRLI---MMEKD--GNHHTR----------ETHFNNLYSMVHYCENITECRRIQLLAYFG 1006
Query: 771 EK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV------------KLTGQ- 812
E F+ CKK +CDNC K K + +DVT+ K +V V K G
Sbjct: 1007 ENGFNPDFCKKHPDVSCDNCCKTKDYKSRDVTEDVKSIVRFVQEHSSSQGMRNIKHVGPS 1066
Query: 813 -QFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK 871
+F+ + ++++F GS + ++ + G G ++ A R+ + L+++ L E++
Sbjct: 1067 GRFTMNMLVDIFLGSKSAKIQS------GIFGKGSAYSRHNAERLFKKLILDKILDEDLY 1120
Query: 872 KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLS 931
+ +++ V+ N KA ++ G N+ + F NS+ + K AK S
Sbjct: 1121 INANDQAIAYVMLGN--KAQTVLNG--NLKVDFMETENSSSVKKQKALVAKVS------- 1169
Query: 932 PSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKR 989
Q E + K L T + K G+ GV ++IF TL+ L++
Sbjct: 1170 ----------QRE---EMVKKCLGEL----TEVCKSLGKVFGVHYFNIFNTVTLKKLAES 1212
Query: 990 VPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ E LL+I+G+ + K+ KYG ++ ++
Sbjct: 1213 LSSDPEVLLQIDGVTEDKLEKYGAEVISVLQ 1243
>gi|326368226|ref|NP_001191836.1| ATP-dependent DNA helicase Q1 isoform 3 [Mus musculus]
gi|74209854|dbj|BAE23625.1| unnamed protein product [Mus musculus]
gi|148678693|gb|EDL10640.1| RecQ protein-like, isoform CRA_d [Mus musculus]
Length = 631
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/518 (39%), Positives = 291/518 (56%), Gaps = 45/518 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW K++ + VF FRP Q E IN TM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERL--- 599
++ LTATAT V +DV + L + C+ F SFNRPNL+ + E E +
Sbjct: 248 ASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIVKL 307
Query: 600 -------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +SL+ G A YH +++P + V QWS +E+ +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNVSKCRRVLIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+++ C K CDNC K SF +K+VT + L++++K L++ + +
Sbjct: 465 VWNADACNKMCDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
K R + L + + RI+ H +++ +L E+
Sbjct: 525 AKLRVAGV----VAPALPREDLERIVAHALLQQYLKED 558
>gi|326368214|ref|NP_001191835.1| ATP-dependent DNA helicase Q1 isoform 2 [Mus musculus]
Length = 634
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/534 (39%), Positives = 299/534 (55%), Gaps = 47/534 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W+ DFPW K++ + VF FRP Q E IN TM+ D+F++MPTGGGKSL YQLPA
Sbjct: 68 WNKEDFPWFGKVKDVLQNVFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPA 127
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L G TLVI PL+SL++DQ+M L Q I AT L+ + + + E+ + + KL+
Sbjct: 128 LCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSQLKLI 187
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + + +LE L +DE HC SQWGHDFRPDY+ LGILK++FPN
Sbjct: 188 YVTPEKIAKSKMFMSRLEKAYEAGRLTGAAVDEVHCCSQWGHDFRPDYKALGILKRQFPN 247
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERL--- 599
++ LTATAT V +DV + L + C+ F SFNRPNL+ + E E +
Sbjct: 248 ASLMGLTATATNHVLKDVQKILCVGKCLTFTASFNRPNLFYEVRQKPSSAEDFTEDIVKL 307
Query: 600 -------QVGLSYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
Q G+ Y E +SL+ G A YH +++P + V QWS +E+ +
Sbjct: 308 INGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHANMEPEDKTKVHTQWSANELQV 367
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD R+ C+LYY + D R+
Sbjct: 368 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRIS 427
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ + N G+ + L MVSYC+N CRR+L HF E
Sbjct: 428 SMVV-----------------MENVGQ------QKLYEMVSYCQNVSKCRRVLIAQHFDE 464
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+++ C K CDNC K SF +K+VT + L++++K L++ + +
Sbjct: 465 VWNADACNKMCDNCCKDVSFEKKNVTQHCRDLIKILKQAEGLNEKLTPLKLIDAWMGKGA 524
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKV 885
K R + L + + RI+ H +++ +L E+ + Y ++ S LKV
Sbjct: 525 AKLRVAGV----VAPALPREDLERIVAHALLQQYLKEDYSFT-AYATI-SYLKV 572
>gi|379642609|ref|NP_001243837.1| Bloom syndrome, RecQ helicase-like [Xenopus (Silurana) tropicalis]
Length = 1327
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/689 (34%), Positives = 362/689 (52%), Gaps = 123/689 (17%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+++ S++FP +K++ K FG H FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 596 ERFKSFNFPHSKEMMKIFHKKFGLHRFRTNQLEAINACLLGEDCFILMPTGGGKSLCYQL 655
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
P + PG+T+VISPL SLI DQ+ L ++ A
Sbjct: 656 PGCVSPGVTIVISPLRSLIVDQVQKLTSLDVCA--------------------------- 688
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
S L+ +E+L R+LLAR VIDEAHCVSQWGHDFRPDY+ L +L+QKF
Sbjct: 689 -----------STRLISTMENLYERQLLARFVIDEAHCVSQWGHDFRPDYKRLNMLRQKF 737
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL------------WMDCEKV 595
+ P++ALTATA V++D++ L + IF SFNR NL +DC +
Sbjct: 738 QSVPMMALTATANPRVQKDILNQLKMTKPQIFTMSFNRDNLKYDVLPKKPKRVALDCVEW 797
Query: 596 AERLQVGLSYGHFFLLK----EFYVVSLECGHKAAF-YHGSIDPAQRAFVQKQW-SKDEI 649
++ S G + L + +L+ G AA YH + + R +VQ +W ++D+
Sbjct: 798 IKKYHPNDS-GIIYCLSRHECDTMADTLQKGGLAALAYHAGLADSNRDYVQHKWINQDDC 856
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
+ICAT+AFGMGI+KPDVR+VIH SLPKS+EGY+QE GRAGRDG+ S C+L+YSYSD R
Sbjct: 857 QVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYSYSDVTR 916
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
++ +I + + +T+ NL MV YCEN V+CRR+ L +F
Sbjct: 917 IRRLI---------------QMEKDGNSHTKQTHFNNLYSMVHYCENVVECRRMQLLAYF 961
Query: 770 GEK-FDSAHCKK----TCDNCSKIKSFIEKDVTDTAKKLVELV-----------KLTGQQ 813
GE F+ CK+ +CDNC K F ++VTD + +V V + +
Sbjct: 962 GENNFNPNFCKENTRVSCDNCLGRKEFKSRNVTDDVRNIVRFVQENCSSARGKGRSNSSR 1021
Query: 814 FSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKS 873
+ + ++++F GS + ++ L G G ++ A R+ R LV++ L EE+ +
Sbjct: 1022 LTLNMMVDIFLGSKSAKIQ------TGLFGKGAAYSRHNAERLFRKLVLDRILDEELYIT 1075
Query: 874 DVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPS 933
+V+ V +++A + + + F N++ L K K S+++ +
Sbjct: 1076 ANDQAVAYVKTGERAQA----VLNGFLTVEFQDTENASSLRKQ-----KASVVAN--TSQ 1124
Query: 934 RNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE--GVMAYHIFGNATLQHLSKRVP 991
R + + Q E+ T L K G+ GV ++IF AT++ +++ +
Sbjct: 1125 REEMVKKCQAEL----------------TELCKRLGKIFGVHYFNIFNTATIRRIAESLS 1168
Query: 992 RTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ LL+I+G+ + K+ KYG L++ ++
Sbjct: 1169 PEPDVLLQIDGVTEDKLEKYGAELIDVLQ 1197
>gi|56207957|emb|CAI21096.1| novel protein similar to vertebrate RecQ protein-like DNA helicase
Q1-like (RECQL) [Danio rerio]
Length = 639
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 300/521 (57%), Gaps = 50/521 (9%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
Q + DF W+K+++ N +F FRP QR IN +MSG D+F++MPTG GKSL YQL
Sbjct: 72 QHYEDSDFSWSKEVQVNLCNIFQLSKFRPLQRAAINLSMSGKDLFLVMPTGRGKSLCYQL 131
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PAL G TLVI+PLVSL++DQ+M+L N+PA L+ + + + IL + +K
Sbjct: 132 PALCSKGFTLVIAPLVSLMEDQLMYLQSVNVPAVTLNASSSKEDSKRILAGMTDKNSPFK 191
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+AKS +L+ +LE LLARI +DE HC SQWGHDFRPDY+ LGILK++F
Sbjct: 192 LLYVTPEKIAKSKLLMSKLEKAFNMGLLARIAVDEVHCCSQWGHDFRPDYKLLGILKRQF 251
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM--------DC-EKVAER 598
PN P++ LTATAT++V +D + L + + FNRPNL+ DC +++A
Sbjct: 252 PNVPLIGLTATATSNVLKDCQKILCVQEPVTLTAPFNRPNLYYEVRFKDNEDCTDQIASL 311
Query: 599 L------QVGLSYGHFFLLKEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKDEI 649
+ Q G+ Y F K+ VV+ E + A YH +++P+ ++ V ++WS +I
Sbjct: 312 IRGRYKNQSGIVY--VFSQKDAEVVATELQKRDIVAQPYHANMEPSHKSLVHQRWSSKKI 369
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
++ ATVAFGMGI+K DVRFVIHH++ KSIE Y+QE GRAGRD + C++++ + D R
Sbjct: 370 QVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDSPADCIVFFGFMDIFR 429
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLE-TNTENLLRMVSYCENDVDCRRLLQLVH 768
+ M+ V+E T + L MV+YC+N CRR + +H
Sbjct: 430 ISTMV------------------------VMENTGQQKLHNMVAYCQNSSRCRRAMMAIH 465
Query: 769 FGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLN 828
F E ++ C + CD C +I D+T A+ ++ +V+L L+V L
Sbjct: 466 FDEVWNDEECNEMCDVCRHGNDYITMDITQHARDVLHIVELASSMDEKLTPLKVCDAWLG 525
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ K R + + L L++ E ++ HL++ + E+
Sbjct: 526 KGPAKQR-KMIKLTS----LSRLEVESVIIHLLLHGYFSED 561
>gi|443322394|ref|ZP_21051417.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
gi|442787869|gb|ELR97579.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
Length = 701
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/658 (35%), Positives = 364/658 (55%), Gaps = 83/658 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L++ K+ FG+ FRP Q +II ++ D+ V+MPTGGGKSL YQLPAL+ PG+TLV+S
Sbjct: 4 LKSALKRFFGHDVFRPLQEQIIAEVLNNRDLLVIMPTGGGKSLCYQLPALLKPGLTLVVS 63
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS- 499
PL+SL+QDQ+ L I ATFL+ ++ E Q RE+ KLLYV PE++
Sbjct: 64 PLISLMQDQVNALKDRGIGATFLNSSLNSQEIQSRSREILQG--NIKLLYVAPERLLSEG 121
Query: 500 -DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
V L Q++ LA IDEAHCVS+WG DFRP+Y+ + L+Q++P P++ALTAT
Sbjct: 122 FSVFLTQIQQDVGISALA---IDEAHCVSEWGQDFRPEYRQIKGLRQRYPQVPMVALTAT 178
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWM--------DCEKVAERLQVGLSYGHFFL 610
AT V++D++Q LGL+ ++ SFNRPNL+ D ++ + +++ G +
Sbjct: 179 ATTRVRQDIIQQLGLIKPGVYVDSFNRPNLYYEVVSKDKRDYPQLLKYIKLQQGSGIVYC 238
Query: 611 LKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKP 665
L V + G + YHG +D R+ Q ++ D++ ++ AT+AFGMGINKP
Sbjct: 239 LSRRRVEEVASRLQADGISSLPYHGGMDDTVRSVYQNRFIGDDVRVMVATIAFGMGINKP 298
Query: 666 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFT 725
DVRFV H+ LP+++E Y+QE GRAGRDG+R+ CVL++S D + ++I Q
Sbjct: 299 DVRFVFHYDLPRNLESYYQEVGRAGRDGERAICVLFFSRGDIRTIDYLIKQKS------D 352
Query: 726 PGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC 785
P R + L MV Y E+ V CRR +QL +FGE+F S C + CDNC
Sbjct: 353 PSAQRL-----------ARQGLSSMVDYAESTV-CRRKIQLSYFGERF-SGSC-QNCDNC 398
Query: 786 SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
K ++D T A+K + V ++F +HI++V RGS + ++++ H LS +G G
Sbjct: 399 LNPKP--QEDWTIEAQKFLSCVARCQERFGMNHIIDVLRGSRKEKIERYGHHLLSTYGIG 456
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
K ++ R+ R L+ + + +D Y ++LK+N+ +LR
Sbjct: 457 KDISSEAWKRLGRSLLDQGLVN---ATNDDY----AILKLNKLSWE---------ILR-- 498
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
NS ++S + TP ++ Q D+ S L+ LR LR L
Sbjct: 499 ---NSRRVSVAVATPK-----------------AEKQQTKDIE-SEFLWLQLRQLRQKLA 537
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y I ++TL+ LS+R P T+ +L +I+G+ ++K+++YG LE I++ +
Sbjct: 538 DRL--GIPPYSIISDSTLKVLSQRQPTTKAQLGQISGLNQSKIAQYGDLFLEEIKAFL 593
>gi|300868275|ref|ZP_07112904.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
gi|300333710|emb|CBN58088.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
Length = 726
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 242/665 (36%), Positives = 361/665 (54%), Gaps = 79/665 (11%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
F + LE K FG SFRP QREI+ A +S D+ ++MPTGGGKSL +QLPAL+ PG
Sbjct: 9 FTQPRSLEQALKHFFGYDSFRPGQREIVEAALSKRDMLIVMPTGGGKSLCFQLPALLKPG 68
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPE 494
+T+V+SPL++L+QDQ+ L I ATFL+ + E + RE K KLLYV PE
Sbjct: 69 LTVVVSPLIALMQDQVESLRDNGIGATFLNSTLSLMETRS--RETAILDGKIKLLYVAPE 126
Query: 495 KVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLA 554
++ S+ L L+ + A ++ IDEAHCVS+WGHDFRPDY+ + ++ ++P+ P++A
Sbjct: 127 RLL-SERFLPFLDQVAASLGISAFAIDEAHCVSEWGHDFRPDYRQILQVRDRYPHIPIMA 185
Query: 555 LTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK-----VAERLQV----GLSY 605
LTATAT V+ D++Q L L I SFNRPNL+ + AE LQ+ G S
Sbjct: 186 LTATATDRVRLDIMQQLALREPYIHVASFNRPNLYYEVRAKTKHSFAELLQIIDKNGGS- 244
Query: 606 GHFFLLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGM 660
G + L V L + G A YH ++ + R Q ++ +D++ I+ ATVAFGM
Sbjct: 245 GIIYCLSRKNVDELAYKLQQVGISALPYHAGLNDSDRTSNQTRFIRDDVQIMVATVAFGM 304
Query: 661 GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAE 720
GINKPDVRFV+H++LP+++EGY+QE GRAGRDG+ + C+L+ Y D ++++I E
Sbjct: 305 GINKPDVRFVVHYNLPRNLEGYYQESGRAGRDGEPAQCILFLGYGDRKTIEYLI-----E 359
Query: 721 QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKK 780
Q P P R T+ R++ Y E DCRR +QL +FGE F +C +
Sbjct: 360 QKP-DPQEQRI-----------ATQQFRRVIDYAEAS-DCRRTIQLSYFGEAF-PGNCSQ 405
Query: 781 TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
CDNC K +D T A K + V ++F +HI+EV RGS +Q V ++ H+ LS
Sbjct: 406 -CDNCRNQKPL--EDWTIEAMKFLSGVARCKERFGMNHIIEVLRGSKSQKVLQYGHDKLS 462
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
+G GK + + + R L+ + L E +D Y VLK+N R
Sbjct: 463 TYGIGKEKSAEDWKMLARSLLHQGLLDE---TTDGY----PVLKLN---------ARSWE 506
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
V++ + + K +V + S + E+ L+ LR L
Sbjct: 507 VMKRQRTVEIAVVRKQEVQGVQRY--------------SAAEGEI-------LFGVLRKL 545
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + E + V Y +F +++L+ ++++ P+T E +I+G+G K KYG + +E I
Sbjct: 546 RKQIADE--QFVPPYVVFPDSSLRAMAEQRPQTLNEFAKISGVGTRKRDKYGKQFIEAIR 603
Query: 1021 STIKE 1025
+E
Sbjct: 604 EYCEE 608
>gi|148540131|ref|NP_001038561.2| ATP-dependent DNA helicase Q1 [Danio rerio]
gi|71679679|gb|AAI00013.1| RecQ protein-like (DNA helicase Q1-like) [Danio rerio]
Length = 639
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 300/521 (57%), Gaps = 50/521 (9%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
Q + DF W+K+++ N +F FRP QR IN +MSG D+F++MPTG GKSL YQL
Sbjct: 72 QHYEDSDFSWSKEVQVNLCNIFQLSKFRPLQRAAINLSMSGKDLFLVMPTGRGKSLCYQL 131
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PAL G TLVI+PLVSL++DQ+M+L N+PA L+ + + + IL + +K
Sbjct: 132 PALCSKGFTLVIAPLVSLMEDQLMYLQSVNVPAVTLNASSSKEDSKRILAGMTDKNSPFK 191
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+AKS +L+ +LE LLARI +DE HC SQWGHDFRPDY+ LGILK++F
Sbjct: 192 LLYVTPEKIAKSKLLMSKLEKAFNMGLLARIAVDEVHCCSQWGHDFRPDYKLLGILKRQF 251
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM--------DC-EKVAER 598
PN P++ LTATAT++V +D + L + + FNRPNL+ DC +++A
Sbjct: 252 PNVPLIGLTATATSNVLKDCQKILCVQEPVTLTAPFNRPNLYYEVRFKDNEDCTDQIASL 311
Query: 599 L------QVGLSYGHFFLLKEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKDEI 649
+ Q G+ Y F K+ VV+ E + A YH +++P+ ++ V ++WS +I
Sbjct: 312 IRGRYKNQSGIVY--VFSQKDAEVVATELQKRDIVAQPYHANMEPSHKSLVHQRWSSKKI 369
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
++ ATVAFGMGI+K DVRFVIHH++ KSIE Y+QE GRAGRD + C++++ + D R
Sbjct: 370 QVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDSPADCIVFFGFMDIFR 429
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLE-TNTENLLRMVSYCENDVDCRRLLQLVH 768
+ M+ V+E T + L MV+YC+N CRR + +H
Sbjct: 430 ISTMV------------------------VMENTGQQKLHNMVAYCQNVDRCRRAMMAIH 465
Query: 769 FGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLN 828
F E ++ C + CD C +I D+T A+ ++ +V+L L+V L
Sbjct: 466 FDEVWNDEECNEMCDVCRHGNDYITMDITQHARDVLHIVELASSMDEKLTPLKVCDAWLG 525
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ K R + + L L++ E ++ HL++ + E+
Sbjct: 526 KGPAKQR-KMIKLTS----LSRLEVESVIIHLLLHGYFSED 561
>gi|425444700|ref|ZP_18824746.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|425454418|ref|ZP_18834158.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
gi|389735511|emb|CCI01005.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|389804921|emb|CCI15689.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
Length = 703
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/645 (36%), Positives = 364/645 (56%), Gaps = 75/645 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKVLKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + +E RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRE--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSY-------GHFFLLK 612
V+ED++Q LGL + I SFNRPNL+ + + K ++ Q Y G + +
Sbjct: 184 QQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKGSGIVYCIS 243
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G A YH +D +R+ Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 244 RKTVDKVAEQLQKDGIDALPYHAGMDDRERSENQTRFIRDDVQIMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 304 RFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ------- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N R + L +++ Y E +CRR L +FGE F S +C CDNC
Sbjct: 357 ----NEQQKAR------QQLRQVLDYAEG-TECRRSSVLGYFGESF-SGNCG-NCDNCRN 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +D T A+K + V TGQ+F HI+ V RG + + +++H LS +G GK
Sbjct: 404 GNN--SEDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+ R LV ++ L+E D + +LK+NQ+ + ++ +++V + P
Sbjct: 462 KTVGEWKRLSRSLVQQNLLVE---TEDNF----RILKLNQN-SWEVMRKQRSVFIAVPQK 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
N G +L +D P+ ++++ L+ LR LR +
Sbjct: 514 AN-------------GQILG-------DDNPNTLESDL-------LFERLRQLRKKIAD- 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+GV Y IF +++L+ +++ PR+ E +I+G+ ++KV +YG
Sbjct: 546 -SQGVPPYVIFHDSSLRLMAQSKPRSLGEFRQISGVVQSKVQQYG 589
>gi|428320783|ref|YP_007118665.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC 7112]
gi|428244463|gb|AFZ10249.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC 7112]
Length = 731
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 243/678 (35%), Positives = 368/678 (54%), Gaps = 88/678 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG SFRP Q+EI+ A + D+ ++MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 15 LEQALKHFFGYDSFRPGQQEIVEAALQKRDMMIVMPTGGGKSLCFQLPALLKPGLTVVVS 74
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + E + RE K KLLYV PE++ +
Sbjct: 75 PLIALMQDQVEALQDNGIGATFLNSTLSTQETRS--RETAILEGKIKLLYVAPERLL-GE 131
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ + + ++ IDEAHCVS+WGHDFRP+Y+ + ++ ++P+ P++ALTATAT
Sbjct: 132 RFLPFLDIVANKLGISAFAIDEAHCVSEWGHDFRPEYRQMQRVRDRYPDIPIMALTATAT 191
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-----KVAERLQV----GLSYGHFFLL 611
V++D++Q L L N I SFNRPNL+ + AE LQ+ G S G + L
Sbjct: 192 ERVRQDIIQQLTLRNPYIHVASFNRPNLYYEVRPKTKHSFAEVLQIIQKKGGS-GIIYCL 250
Query: 612 KEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
V + + G A YH ++ RA Q ++ +D++ ++ AT+AFGMGINKPD
Sbjct: 251 SRKKVEEVAYKLQQSGIAALPYHAGMNDVDRATNQTRFIRDDVQVMVATIAFGMGINKPD 310
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH+ LPK++EGY+QE GRAGRD + + C L++ Y D + ++I EQ P P
Sbjct: 311 VRFVIHYDLPKNLEGYYQESGRAGRDNEPAHCSLFFGYGDVKMIDYII-----EQKP-DP 364
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
R + L R+++Y E+ DCRR +QL +FG+ F +C TCDNC
Sbjct: 365 QEQRI-----------ARQQLRRVINYAES-TDCRRTIQLSYFGDSF-PGNC-GTCDNCC 410
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
K +D T A K + V ++F +HI++V RGS NQ + +++H LS +G GK
Sbjct: 411 NQKPV--EDWTIEAMKFLSCVARCQEKFGMNHIIDVLRGSKNQKILQYQHHKLSTYGIGK 468
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ + ++ R L+ + FL E K+D + +LK+N+ I+ RQ V
Sbjct: 469 DRSAEDWKKLSRSLLNQGFLDE---KTDGF----PILKLNEKSWE--IMKRQRTV----- 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVD---LNLSAKLYSSLRMLRTL 963
+ +PQ EV +L+ ++ + +LRTL
Sbjct: 515 -----------------------------EIAIEPQREVQGKVRSLAVEVEALFTILRTL 545
Query: 964 LVKEAGEG-VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ A E V Y +F + +L+ ++++ P+ E E+ G+G K KYG LE I S
Sbjct: 546 RKQIADEQFVPPYVVFADKSLRDMAEKRPQNLREFEEVYGVGSNKRDKYGKVFLEAIRSF 605
Query: 1023 IKEFYKTDKNGSSSNDSN 1040
+E G+SS+ +N
Sbjct: 606 CQE-QGLPTGGASSDVAN 622
>gi|50557416|ref|XP_506116.1| YALI0F31977p [Yarrowia lipolytica]
gi|49651986|emb|CAG78930.1| YALI0F31977p [Yarrowia lipolytica CLIB122]
Length = 1300
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/513 (40%), Positives = 299/513 (58%), Gaps = 32/513 (6%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI-- 431
++PWT+++ ++ F + FR NQ INAT++G DV VLMPTGGGKSL YQLPAL+
Sbjct: 487 EYPWTQEVYKVLRERFMLNEFRANQLHAINATLNGDDVLVLMPTGGGKSLCYQLPALVNG 546
Query: 432 --CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
G+++VISPL+SL++DQ L NI + + E+++ L L+S LL
Sbjct: 547 GKTRGLSVVISPLISLMKDQTEALTAKNISCAMFNSSQSVQERKQSLAALSSG--DIALL 604
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YV+PE +S+++ L L+ + LARIVIDEAHCVS WGHDFRPDY+ L +K + P
Sbjct: 605 YVSPEMFQQSNIMQNTLHKLHEQNRLARIVIDEAHCVSSWGHDFRPDYKALVNVKSRLPG 664
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW--------------MDCEKV 595
P++ALTATA V+ D+ Q N F+QSFNRPNL+ D +
Sbjct: 665 VPIMALTATANEKVRMDI-QGCLRPNRRFFKQSFNRPNLYYEVRLKTKNFQQEITDMLRG 723
Query: 596 AERLQVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICA 654
R Q G+ Y H L E L E G KA FYH ++ QR +VQ W +I ++CA
Sbjct: 724 RYRGQTGIIYCHSKKLCETTSEFLKEAGIKADFYHAGMETEQRTYVQGNWQSGKIQVVCA 783
Query: 655 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI 714
T+AFGMGI+K DVR+VIH ++P+++EGY+QE GRAGRDG S C++Y+S D + M+
Sbjct: 784 TIAFGMGIDKADVRYVIHCTVPRNMEGYYQETGRAGRDGLPSKCIVYFSQKD---ARQML 840
Query: 715 SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD 774
++ F + + + A + R + E + +++YCEN VDCRR+ L +F E FD
Sbjct: 841 FNIANDE--FLGENGKVDWALTQRQRTHHRELMQGVINYCENRVDCRRVQVLRYFNETFD 898
Query: 775 SAHCKKTCDNCSKIKSFIE--KDVTDTAKKLVELVKLT---GQQFSSSHILEVFRGSLNQ 829
C+ +CDNC + +DVTD AK +++LV Q + ++ ++ RGS +
Sbjct: 899 PKLCRNSCDNCQYGHEYTRETRDVTDVAKNIIKLVSAATQDNQNITVAYCGDLIRGSATK 958
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVI 862
VK H L+ +G GK K+ RI+ L++
Sbjct: 959 KVKDLGHNELAGYGTGKVYDKTTLERIITKLIL 991
>gi|71406960|ref|XP_805980.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma cruzi strain CL
Brener]
gi|70869587|gb|EAN84129.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1451
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/542 (41%), Positives = 308/542 (56%), Gaps = 61/542 (11%)
Query: 357 IKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMP 416
+ VNY+ ++S +F W+ L VFG H +R Q EI+NA M G D FVL+P
Sbjct: 354 LPVNYV-----NRYSGENFSWSADLRRTMIDVFGLHQYRFLQLEIMNACMDGRDAFVLLP 408
Query: 417 TGGGKSLTYQLPALIC-PG-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQE 474
TGGGKSL YQLPAL+ P +T+VISPL+SLIQDQ+ L+ +IPA L+G ++
Sbjct: 409 TGGGKSLCYQLPALMPNPAQVTIVISPLISLIQDQVYALIANDIPAIALTGQTSDAPRRA 468
Query: 475 ILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFR 534
+ E S + L+YVTPE +SD ++ L L +R LL+R V+DEAHCVSQWGHDFR
Sbjct: 469 LFAEWASGRIVHTLVYVTPEYFGRSDHFVQCLVHLASRGLLSRFVVDEAHCVSQWGHDFR 528
Query: 535 PDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK 594
PDY+ L ILKQ FP P+ ALTATAT V++D++ L L + ++F+ SFNR NL K
Sbjct: 529 PDYRKLAILKQHFPAIPISALTATATDMVQQDIISTLRLQDALVFKGSFNRQNLSYSVRK 588
Query: 595 VAERL-QVGLSY-GHFFLLKEFYVVSL----EC----------GHKAAFYHGSIDPAQRA 638
V + QV + H F + +V +C G +A++YH + + +
Sbjct: 589 VGRSVGQVVVDLIKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHA--EASGKN 646
Query: 639 FVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSC 698
Q++W+KDE+ +ICAT+AFGMGINKPDVRFVIH ++PKSIEGY+QE GRAGRDG S C
Sbjct: 647 EKQERWTKDELQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLLSEC 706
Query: 699 VLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDV 758
+L S SD R + MI G N + +T+ +L RM++Y NDV
Sbjct: 707 ILLCSPSDKQRHEQMIY-----------GSNDW---------KTSMSSLYRMLAYTMNDV 746
Query: 759 DCRRLLQLVHFGEKFDSAHCKK-------TCDNCSKIKS----FIEKDVTDTAKKLVELV 807
CRR+ QL +FGE D +C K TCDNC+ +S E DV+ L ++
Sbjct: 747 HCRRMQQLGYFGEDMDEHYCLKQPEGSVATCDNCASKRSDRWETGELDVSAIVIDLFNII 806
Query: 808 KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH--LAKSEASRILRHLVIEDF 865
G +S ++ V+RG+ + V K + GA L IL +V+E
Sbjct: 807 VHLG-SLTSKQLIGVYRGTAD--VGKAVETRMRQAGAPPEYKLGARHTKFILERVVLEAL 863
Query: 866 LM 867
L+
Sbjct: 864 LL 865
>gi|336265633|ref|XP_003347587.1| SGS1 protein [Sordaria macrospora k-hell]
gi|380096454|emb|CCC06502.1| putative SGS1 protein [Sordaria macrospora k-hell]
Length = 2276
Score = 375 bits (962), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/521 (40%), Positives = 296/521 (56%), Gaps = 49/521 (9%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
FPW+ + K F FR NQ E INAT+ G D FVLMPTGGGKSL YQLPA++
Sbjct: 1198 FPWSNDVRKALKDRFRMAGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKSG 1257
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY--KL 488
GIT+VISPL+SL+ DQ+ HL I A +G+M ++ + ++L++ + ++ +L
Sbjct: 1258 KTRGITVVISPLLSLMLDQVNHLKNLMITAYAFNGDMNAETRRMVFQKLDTPHPEHELQL 1317
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE V+K+ + ++ L R LARIVIDEAHCVSQWGHDFRPDY+ +G +++FP
Sbjct: 1318 LYVTPEMVSKNMQFVGKMGDLYQRNKLARIVIDEAHCVSQWGHDFRPDYKAIGEFRKRFP 1377
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERL- 599
PV+ALTATAT +V DV L + C F QSFNRPNL+ + ++AE +
Sbjct: 1378 GVPVMALTATATHNVILDVKHNLAMDTCETFSQSFNRPNLYYEVRLKEQNLVARIAELIQ 1437
Query: 600 -----QVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
Q G+ Y E +LE H +A YH SI ++ VQ W ++ ++
Sbjct: 1438 EKYDGQTGIIYTLSRKSAENIAKNLEEKHGIRAKHYHASITTEEKIKVQHDWQAGDVKVV 1497
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGI+KPDVRFVIH +PKS+EGY+QE GRAGRDG+ S C LY++Y D ++
Sbjct: 1498 VATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRAGRDGKPSDCYLYFAYGDIQSLRR 1557
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRM-VSYCENDVDCRRLLQLVHFGE 771
MI++G + + +++L M V+YCE+ CRR L +FGE
Sbjct: 1558 MIAEGDGDYE-----------------QKERQKHMLNMVVNYCESQHTCRREEVLRYFGE 1600
Query: 772 KFDSAHCKKTCDNCSK---IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLN 828
+FD CK CDNC KS +D T+ A +E+VK + + + + ++ G
Sbjct: 1601 EFDFRKCKDGCDNCRYGRITKSTEMRDFTEIALATIEVVK-SQKTLTLGKLCDILMGK-- 1657
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
KK+ H + G K + E RI+ L L E+
Sbjct: 1658 ---KKNEHAGICHFGIAKGSTQRELQRIVLQLNFHKALGEK 1695
>gi|308051389|ref|YP_003914955.1| ATP-dependent DNA helicase RecQ [Ferrimonas balearica DSM 9799]
gi|307633579|gb|ADN77881.1| ATP-dependent DNA helicase RecQ [Ferrimonas balearica DSM 9799]
Length = 608
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/651 (35%), Positives = 351/651 (53%), Gaps = 86/651 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FRP Q E++ T++G D V+MPTGGGKSL YQLPAL+ PG+T+VISPL+SL
Sbjct: 20 QQVFGFRAFRPGQDEVVAQTLAGRDCLVIMPTGGGKSLCYQLPALVLPGLTVVISPLISL 79
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L ++ + A L+ ++E E E++ ++ + KLLY++PE++ +D+ R
Sbjct: 80 MKDQVDALRESGVAAAALNSSLERHEVVELMGAIHRG--EIKLLYISPERLLSADIQERL 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
A L+ + +DEAHC+SQWGHDFRP+Y LG LKQ+FP P++ALTATA + ++
Sbjct: 138 -----AHWPLSLVAVDEAHCISQWGHDFRPEYAQLGWLKQRFPQVPIMALTATADGATRQ 192
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-------WMDCEKVAERLQ-----VGLSY-GHFFLLK 612
D+ Q L L + SF+RPN+ E++ E L+ G+ Y G +
Sbjct: 193 DICQRLNLQQPFHHQSSFDRPNIRYTVAEKLRPLEQLTEYLKQQKGNAGIVYCGSRRRVD 252
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E + G AA YH + +RA VQ+ + +D ++I+ ATVAFGMGINK +VRFV+H
Sbjct: 253 EVAEKLRQKGFVAAGYHAGMASDERAAVQEGFLRDRVDIVVATVAFGMGINKSNVRFVVH 312
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKSIEGY+QE GRAGRDG S +L + +D R++H++ QG +E +P
Sbjct: 313 WDLPKSIEGYYQETGRAGRDGLESEALLLFDPADIARIRHLLEQGESEPNP--------- 363
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L M ++ E + CRR + L +F E + C NC
Sbjct: 364 ---------VDIHKLNAMAAFAEAQI-CRRQVLLNYFDEP-----SHEPCGNCDICLDPP 408
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D T+ A+K + V GQ+F H++EV RGS Q V H LS G GK +
Sbjct: 409 KRYDGTEEARKALSCVYRVGQRFGMGHVIEVLRGSQAQPVLDRGHNKLSTWGIGKEKSHD 468
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYG---SVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+LR L+ L +++ +S V + +VLK +S L + + L+ PS+
Sbjct: 469 HWLSVLRQLIHHGLLSQDITRSMVLTLNPAARAVLKGERS----LELAEPRLALKKPSSR 524
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
S L PS+ D KL++ L+ LR L EA
Sbjct: 525 RSRAL------------------PSQYDR--------------KLFAKLKALRKELADEA 552
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
GV Y +F +ATL ++ ++P + E+L ING+G+ K+ +YG L I
Sbjct: 553 --GVPPYVVFNDATLAEMAAQLPGSRWEMLAINGVGERKLERYGDAFLTLI 601
>gi|443476000|ref|ZP_21065927.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
gi|443019101|gb|ELS33248.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
Length = 769
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 237/658 (36%), Positives = 363/658 (55%), Gaps = 75/658 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L+ K+ FG SFR QREII+A ++G D +MPTGGGKS+ +QLPAL+ G+T+V+S
Sbjct: 34 LQQALKQYFGYESFRAGQREIIDAHLAGRDTLAIMPTGGGKSICFQLPALLKTGVTIVVS 93
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTE----QQEILRELNSDYCKYKLLYVTPEKV 496
PL++L+QDQ+ L + I ATFL+ + E Q IL KL+YV PE++
Sbjct: 94 PLIALMQDQVTALKENGIGATFLNSTLSGRETNQRSQAILN------GAIKLIYVAPERL 147
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
++ + L + + +A IDEAHCVS+WGHDFRP+Y+ L L+Q +P+ PV+ LT
Sbjct: 148 F-AEQFIEFLNIVKNKIGIAGFAIDEAHCVSEWGHDFRPEYRQLSRLRQFYPDVPVIGLT 206
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--EKVAERLQVGL--------SYG 606
ATAT V+ED++Q L L + SFNR NL+ + ++ E+ V L G
Sbjct: 207 ATATERVREDIIQQLDLQQPYVHVASFNRDNLYYEVVPKQGTEQSYVNLLQQIKRMQGSG 266
Query: 607 HFFLLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
+ L V + E G A YH + +R Q +W +D++ ++ AT+AFGMG
Sbjct: 267 IVYCLSRKRVNEIAERLREDGIAAIPYHAGLSAKEREENQTRWIRDDVQVMVATIAFGMG 326
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
INKPDVRFVIH+ LPK+IEGY+QE GRAGRDG+ S C L+ Y D +K++I+Q V
Sbjct: 327 INKPDVRFVIHYDLPKNIEGYYQESGRAGRDGEDSHCTLFLGYQDLETIKYLIAQKV--- 383
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
P H + R+ + + L ++V Y E + CRR + L +FGE F S C
Sbjct: 384 DP----HTNEPLEAEQRIAQ---QQLRQVVDYAEG-LACRRTILLRYFGEHF-SGDC-AN 433
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CDNC K +D T ++K + V ++F + I+++ RGSLN+ + +H HE LS
Sbjct: 434 CDNCLTPKPM--EDWTVESQKFLSCVARVKERFGAGQIIDILRGSLNKKILQHGHENLST 491
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
HG GK + E ++ R L+ + +L + +D Y ++LK+N ++ ++ ++NV+
Sbjct: 492 HGIGKDRSLDEWRQLSRSLIHQGYL---TQTTDGY----AILKLN-DRSWEVMRSQRNVL 543
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
L + D+ PA + R +P VD+ + L+ LR+LR
Sbjct: 544 LPI----------ERDMEPATVT--------EREGARERP---VDVEI---LFERLRLLR 579
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
L E + V Y IF NATL ++++ P + +E +++G+G K+ +Y + I
Sbjct: 580 KNLADE--QEVPPYVIFSNATLNQMAEQQPTSRKEFAKLSGVGAKKLEQYADNFIAII 635
>gi|390343347|ref|XP_786769.3| PREDICTED: ATP-dependent DNA helicase Q1 [Strongylocentrotus
purpuratus]
Length = 980
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/452 (43%), Positives = 266/452 (58%), Gaps = 44/452 (9%)
Query: 364 GSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSL 423
GS D W D+PW+ KL + + VFG +RP Q + +NA++SG DV +LMPTGGGKSL
Sbjct: 73 GSTD--WEKSDYPWSAKLRSLCETVFGIKKYRPLQEKTMNASLSGRDVILLMPTGGGKSL 130
Query: 424 TYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDY 483
YQLPAL+ G TLV+SPL+SL++DQ M L + + AT L+ N +++ R++
Sbjct: 131 CYQLPALVSKGFTLVVSPLLSLMEDQTMALEEIGVNATVLNSNTPPESVKDVHRQMIDAR 190
Query: 484 CKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGIL 543
+ KLLYVTPEK+AKS + LE LL RI IDE HC SQWGHDFRPDY+ LG+L
Sbjct: 191 SELKLLYVTPEKIAKSKRFMACLEKAYKANLLTRIAIDEVHCCSQWGHDFRPDYKILGLL 250
Query: 544 KQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE----KVAERL 599
K++F +TP+L LTATAT V +DV LGL C +FR FNRPNL+ + K AE +
Sbjct: 251 KRQFTDTPILGLTATATMDVLDDVKGILGLQGCQVFRAGFNRPNLFYEVRPKPSKQAEFV 310
Query: 600 Q--VGLSYGHF---------FLLKEFYVVS---LECGHKAAFYHGSIDPAQRAFVQKQWS 645
+ + L G F F K+ ++ + G +A YH +D R+ V + W
Sbjct: 311 EELIKLINGEFKGQSGIIYCFSRKDTETMAENLKKGGIQAHPYHAMLDAQYRSQVHRNWK 370
Query: 646 KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYS 705
++ I ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD + + C++YY
Sbjct: 371 ENNIQVVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQESGRAGRDDEPARCIVYYGIG 430
Query: 706 DFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
D R M+ V EQ T + L MV+YC CRR L
Sbjct: 431 DVFRQSTMV---VTEQ--------------------TGQQKLYNMVAYCVAPATCRRSLI 467
Query: 766 LVHFGEKFDS-AHCKKTCDNCSKIKSFIEKDV 796
HFGE+++ A C + CD C +EKD+
Sbjct: 468 GQHFGERWEGQARCNRMCDVCQSGAQVVEKDM 499
>gi|428173190|gb|EKX42094.1| BLM RecQ DNA helicase family member, partial [Guillardia theta
CCMP2712]
Length = 412
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/429 (48%), Positives = 257/429 (59%), Gaps = 37/429 (8%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
F WT+KL NK VF N SFR +Q EIIN +SGHD FVLMPTGGGKSL YQLPAL+ PG
Sbjct: 3 FDWTEKLRKINKHVFRNPSFRKHQEEIINTILSGHDCFVLMPTGGGKSLCYQLPALMSPG 62
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS--DYCKYKLLYVT 492
+T+VISPLVSL+ DQ+ +L I A +S N +E +E+ L + +L+Y+T
Sbjct: 63 VTIVISPLVSLMHDQVYNLNLLRIGAYCISANTPMSELEEMYSCLRGVKEGINCQLIYIT 122
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PEK A S L +++ L+RI+IDEAHCVS+WGHDFRPDY+ LG LK K P +
Sbjct: 123 PEKFAHSQRLQNEMQRSFQNGKLSRIIIDEAHCVSEWGHDFRPDYKMLGALKSKLPGVQI 182
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----EKVAERLQVGLS--- 604
+ALTATAT V+ D+ L + F QSFNRPNL + +K AE + +
Sbjct: 183 MALTATATPRVRRDIRNILQINEAYTFMQSFNRPNLRYEVRKKEKKKSAENIATFIKENY 242
Query: 605 ---YGHFFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATV 656
G + L +E E KA YH +D R F Q QWS D+ ++I AT+
Sbjct: 243 PGETGIIYCLSKNRCEEMAAKMQEFKIKALPYHAGLDDQTRKFNQDQWSNDKTHVIVATI 302
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGINKPDVRFVIH SLPKS+EGY+QE GRAGRDG+ S C+LYYSYSD ++
Sbjct: 303 AFGMGINKPDVRFVIHESLPKSMEGYYQESGRAGRDGKISHCILYYSYSD-----KLVHD 357
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
+A Q F N N NL +MV YCE CRR LQL +FGE F
Sbjct: 358 KMA-QDDFDKKENVRN-------------NLNKMVEYCETQFTCRRQLQLHYFGENFGPD 403
Query: 777 HCKKTCDNC 785
C KTCDNC
Sbjct: 404 KCGKTCDNC 412
>gi|324502420|gb|ADY41066.1| Bloom syndrome protein [Ascaris suum]
Length = 1090
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 245/672 (36%), Positives = 356/672 (52%), Gaps = 65/672 (9%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG + FR Q+ I A + G+D FVLMPTG GKSL YQLP+++ G+T+VISPL SL
Sbjct: 310 KKKFGFNQFRHRQKTAIIAALLGYDCFVLMPTGAGKSLCYQLPSVLSGGVTVVISPLKSL 369
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
I+DQ + Q I L+ ++ E I L+ K LLYVTPEK+A S+ L
Sbjct: 370 IEDQKTKMKQLEINCCALTSDLSQAESDRIYAALSETNPKINLLYVTPEKIAASEKLNNV 429
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF--PNTPVLALTATATASV 563
SL+ R LL R VIDEAHC+SQWGHDFRPDY L L++ + P P++ALTATAT +
Sbjct: 430 FASLHRRGLLTRFVIDEAHCISQWGHDFRPDYTKLHSLRKVYINPRVPIMALTATATPKI 489
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERLQV---GLSYGHFFLL- 611
D L + N +F SF R NL D V ER++ G S G + L
Sbjct: 490 ATDARDHLSMPNSKLFISSFVRSNLKYDVIAKRPKSLSAVMERMKALYPGKS-GIVYCLS 548
Query: 612 -KEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
KE VS G A YH + QR VQ +W + IN+ICAT+AFGMGI+KPDV
Sbjct: 549 RKECETVSKSLQNQGISADVYHAGLPDKQRQNVQAKWINNHINVICATIAFGMGIDKPDV 608
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH S+PKSIEGY+QE GRAGRDG S C L Y Y+D IR + MI G
Sbjct: 609 RFVIHFSMPKSIEGYYQETGRAGRDGLTSYCALLYCYNDSIRARKMIE-----------G 657
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT---CDN 784
N ++ V + NL+++V+YCEN CRR + + HFGE +D+ C+ + CD
Sbjct: 658 DN-----STVGVRSMHLNNLMQVVAYCENVSVCRRKVLVEHFGEVYDAEACRTSATPCDI 712
Query: 785 C----SKIKSFIEKDVTDTA---KKLVELVKLTGQQFSSSHILEVFRGSL------NQYV 831
C ++F DVTD A K + + + + + ++ + +RG N ++
Sbjct: 713 CLMQTRNKETFKAYDVTDQAILVAKSMARIAQSSKGVTLKYLADTYRGHTSNRKLANAWL 772
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAH 891
+ ++ L ++G G ++ EA+R +R LVIE ++ E + + +V+ N K
Sbjct: 773 QSNQTR-LPMYGEGVGFSEMEAARFMRTLVIEGYICERLYNTAYDSTVAYAELTN--KGF 829
Query: 892 NLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSA 951
+L +G+ + AI + S+ A L +S +Q + E + A
Sbjct: 830 DLAVGKTRSRIYLHMAIGGRR--SSNAADAAALLRMTVVS------EAQARKEKYMVKHA 881
Query: 952 KLYSSL-RMLRTLLVKEAGEGVMAYH--IFGNATLQHLSKRVPRTEEELLEINGIGKAKV 1008
L+ L +L + A E ++ H I G ++ ++ +PRT +LL++ G+ KV
Sbjct: 882 DLFKRCHEELTSLFNEMAAEEGLSSHLPILGIEGIEQIAALMPRTNSDLLQVEGMTARKV 941
Query: 1009 SKYGVRLLETIE 1020
+Y R+++ ++
Sbjct: 942 ERYAPRIMDLLK 953
>gi|146165477|ref|XP_001015163.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila]
gi|146145471|gb|EAR94918.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila SB210]
Length = 1198
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/600 (37%), Positives = 330/600 (55%), Gaps = 63/600 (10%)
Query: 332 VSFSSVDRLGVSSYPVEREPFIP--------KIIKVN-YIEGSNDQKWSSWDFPWTKKLE 382
V +S++D L ER PF+P + K N Y ++ +++ PW +K+
Sbjct: 341 VDYSTLDYLN----QPER-PFVPLESKNKGKHVSKSNQYYTVADINEYAIKPHPWDQKVN 395
Query: 383 ANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPL 442
V+G +FR NQR IIN + DVF +MPTGGGKSLT+Q+P L+ G+ +VI PL
Sbjct: 396 DILANVYGYKNFRNNQRAIINCVLENKDVFAMMPTGGGKSLTFQIPGLVQDGVYIVIMPL 455
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
+SLI DQ H+L+ NIP + G Q+E+ L SD + K++ +TPEK++ +
Sbjct: 456 ISLISDQYNHMLRLNIPVIRVQG-ARKNYQRELDSILYSDKNQSKIVLITPEKISSDEDF 514
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
+ L + + L R VIDEAHCVSQWGH+FR DY LG LK K+PN P LALTATAT
Sbjct: 515 NQFLSQIYEKNKLRRFVIDEAHCVSQWGHEFRKDYLSLGQLKIKYPNIPTLALTATATEK 574
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL---------------QVGLSYGH 607
K D++Q L + + F+ SFNR NL+ D ++ +++ Q G+ Y
Sbjct: 575 CKIDIIQLLNMKGTLYFQSSFNRTNLYYDVVRIPQKVTIEHMVNFIKEKFNKQSGIIYCC 634
Query: 608 FFLLKEFYVVSLECGHK--AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKP 665
E L +K AA+YHGS++ ++ VQ+ W ++I +ICAT+AFGMGI+K
Sbjct: 635 TKKDSEELASKLNIQYKINAAYYHGSMNDKEKEQVQQLWMSNDIQVICATIAFGMGIDKH 694
Query: 666 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFT 725
DVRFVIH++ KSIE Y+QE GRAGRDG+ S C +YYS D + +I+
Sbjct: 695 DVRFVIHYTFSKSIENYYQEAGRAGRDGKISHCRIYYSPKDKNSLVFLITN--------- 745
Query: 726 PGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC 785
N ++ + E +L +M+ YCE+ ++CRR+LQL H GEKF+ C K CDNC
Sbjct: 746 ------NEGSNKQKKEECMAHLSKMIRYCEDTINCRRVLQLAHLGEKFEPKFCNKMCDNC 799
Query: 786 SKIKS---FIEKDVTDTAKKLV-ELVKLTGQ--QFSSSHILEVFRGSLNQYVKKHRHETL 839
S I+KD T K ++ E + + + Q + +++V RG Q KK L
Sbjct: 800 RNQTSKSNIIQKDFTQDCKNILQEYLSMYNKNIQLTQKQLVDVLRGKKLQ--KKAGQNLL 857
Query: 840 ------SLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
S++ K+ + I++ ++ + +L E++KK Y V L+V +SK + L
Sbjct: 858 KMIENSSIYSLLKNYDQLTVENIVKEMMSQGYLSEKIKKFRAYTQV--FLEVVKSKYNEL 915
>gi|91772141|ref|YP_564833.1| ATP-dependent DNA helicase RecQ [Methanococcoides burtonii DSM 6242]
gi|91711156|gb|ABE51083.1| ATP dependent DNA helicase RecQ [Methanococcoides burtonii DSM 6242]
Length = 647
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/674 (34%), Positives = 367/674 (54%), Gaps = 80/674 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+K FG FRP Q +IIN ++ DVFVLMPTGGGKS+ YQ+PALI G+ +V+SPL+SL
Sbjct: 6 QKYFGYSEFRPLQEDIINDVLNKKDVFVLMPTGGGKSICYQIPALIMDGLAVVVSPLISL 65
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILR---ELNSDYCKYKLLYVTPEKVAKSDVL 502
++DQ+ L+ I A +L+ + + E Q+I R E N D +LYV PE++
Sbjct: 66 MKDQVDGLVSNGISAAYLNSTLSYNEVQKITRAIVEGNVD-----ILYVAPERLC----- 115
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
++ + L + ++ IDEAHC+S+WGHDFRP+Y+ +G LK+K+P+ PV+ALTATATA
Sbjct: 116 MKSTQELLSHVNVSLFAIDEAHCISEWGHDFRPEYRRMGFLKKKYPDVPVIALTATATAK 175
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEF 614
VKE+ ++ L LV+ ++ SF+R NL + +SY G +
Sbjct: 176 VKENTIKQLDLVSPSVYVASFDRANLSYEIRPKNNTYGDMVSYLKGQRGNSGIIYCNSRK 235
Query: 615 YVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
V S+ G A YH ++ A+R Q+++ +D+++II ATVAFGMGI+KP+VRF
Sbjct: 236 SVESVSTKLNREGFHALPYHAGLNDAKRQDNQERFIRDDVDIIVATVAFGMGIDKPNVRF 295
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH+ LPK++EGY+QE GR GRDG C+LY+S +D+ ++K++I Q P +
Sbjct: 296 VIHYDLPKNLEGYYQETGRGGRDGLECDCILYFSRADWYKIKYLIDQ--------KPKKS 347
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
++A + L M+ YCE+ CRR L +FGE+ +S +C +CD C +
Sbjct: 348 ERDIAMT---------KLQEMIDYCES-TSCRRKALLHYFGEELESDNC-GSCDVCLNPR 396
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
D +D A+ + V ++F +HI+++ GS ++ + ++H+ L +G G+
Sbjct: 397 D--TYDASDVARTFLSCVDEVNERFGLTHIVDILTGSKSKKIISYKHDRLKSYGTGEGYI 454
Query: 850 KSEASRILRHLV----------------IEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
KSE + R ++ + E + S+V+ + S V++ +
Sbjct: 455 KSEWVEMAREMIRLGHVDVKEGKYPILLLNKNSREVLGGSEVHLTRSMGTTVSKPRKAPA 514
Query: 894 IIGRQ-NVVLRFPSAINSTKLSKSDV-TPAKGSLLSGKLSPS------RNDTPSQPQNEV 945
+ R N V P++ S K+S + V +PAK + S + S R TP N+
Sbjct: 515 TVSRPGNSVSSRPASSGSKKVSSTVVRSPAKSTKYSSQRRTSVPGKAKRAPTPISRPNK- 573
Query: 946 DLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGK 1005
KL+ LR LR L EA V Y IF + +L+ ++ P E+E + I G+G+
Sbjct: 574 ------KLFDKLRELRKRLAVEA--NVPPYIIFADTSLRQMAANFPNNEKEFIGITGVGE 625
Query: 1006 AKVSKYGVRLLETI 1019
K+ KYG ++ I
Sbjct: 626 VKLKKYGSVFMKEI 639
>gi|71402467|ref|XP_804144.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma cruzi strain CL
Brener]
gi|70866957|gb|EAN82293.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1310
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 230/572 (40%), Positives = 316/572 (55%), Gaps = 63/572 (11%)
Query: 369 KWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLP 428
++S +F W+ L VFG H +R Q EI+NA M G D FVL+PTGGGKSL YQLP
Sbjct: 361 RYSGENFSWSADLRRTMIDVFGLHQYRFLQLEIMNACMDGRDAFVLLPTGGGKSLCYQLP 420
Query: 429 ALIC-PG-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY 486
AL+ P +T+VISPL+SLIQDQ+ L+ +IPA L+G ++ + E S +
Sbjct: 421 ALMPNPAQVTIVISPLISLIQDQVYALIANDIPAIALTGQTSDAPRRALFAEWASGRIVH 480
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
L+YVTPE +SD ++ L L +R LL+R V+DEAHCVSQWGHDFRPDY+ L ILKQ
Sbjct: 481 TLVYVTPEYFGRSDHFVQCLVHLASRGLLSRFVVDEAHCVSQWGHDFRPDYRKLAILKQH 540
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL-QVGLSY 605
FP P+ ALTATAT V++D++ L L + ++F+ SFNR NL KV + QV +
Sbjct: 541 FPAIPISALTATATDMVQQDIISTLRLQDALVFKGSFNRQNLSYSVRKVGRSVGQVVVDL 600
Query: 606 -GHFFLLKEFYVVS--------------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
H F + +V + G +A++YH + + + Q++W+KDEI
Sbjct: 601 IKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHA--EASGKNEKQERWTKDEIQ 658
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGINKPDVRFVIH ++PKSIEGY+QE GRAGRDG S C+L S SD R
Sbjct: 659 VICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLPSECILLCSPSDKQRH 718
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
+ MI G N + +T+ +L RM++Y NDV CRR+ QL +FG
Sbjct: 719 EQMIY-----------GSNDW---------KTSMSSLYRMLAYTINDVHCRRMQQLGYFG 758
Query: 771 EKFDSAHCKK-------TCDNCSKIKS----FIEKDVTDTAKKLVELVKLTGQQFSSSHI 819
E D +C K TCDNC+ +S E DV+ L ++ G +S +
Sbjct: 759 EDMDEHYCLKQPEGSVATCDNCASKRSERWETGELDVSAIVIDLFNIIVHLG-SLTSKQL 817
Query: 820 LEVFRGSLNQYVKKHRHETLSLHGAGKH--LAKSEASRILRHLVIEDFL-------MEEV 870
+ V+RG+ + V K + GA L IL +V+E L +E V
Sbjct: 818 IGVYRGTAD--VGKAVETRMRQAGAPPEYKLGARHTKFILERVVLEALLLGIFKERLERV 875
Query: 871 KKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
+ + V H++ GR+ VVL
Sbjct: 876 TDFVTCAYLEAGEGVGIKVYHDVQSGRRRVVL 907
>gi|407425855|gb|EKF39533.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma cruzi
marinkellei]
Length = 1364
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/529 (42%), Positives = 303/529 (57%), Gaps = 54/529 (10%)
Query: 369 KWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLP 428
++S +F W+ L VFG H +R Q EI+NA M G D FVL+PTGGGKSL YQLP
Sbjct: 361 RYSGENFSWSADLRRTMIDVFGLHQYRFLQLEIMNACMDGRDAFVLLPTGGGKSLCYQLP 420
Query: 429 ALIC-PG-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY 486
AL+ P +T+VISPL+SLIQDQ+ L+ +IPA L+G ++ + E S +
Sbjct: 421 ALMPNPAQVTIVISPLISLIQDQVYALIANDIPAIALTGQTSDAPRRALFAEWASGRIVH 480
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
L+YVTPE +SD ++ L L +R LL+R V+DEAHCVSQWGHDFRPDY+ L ILKQ
Sbjct: 481 TLVYVTPEYFGRSDHFVQCLVHLASRGLLSRFVVDEAHCVSQWGHDFRPDYRKLTILKQH 540
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL-QVGLSY 605
FP P+ ALTATAT V++D++ L L + ++F+ SFNR NL KV + QV +
Sbjct: 541 FPAIPISALTATATDMVQQDIISTLRLQDALVFKGSFNRQNLSYSVRKVGRSVGQVVVDL 600
Query: 606 -GHFFLLKEFYVVSL----EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
H F + +V +C G +A++YH + + + Q++W+KDE+
Sbjct: 601 IKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHA--EASGKNEKQERWTKDELQ 658
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGINKPDVRFVIH ++PKSIEGY+QE GRAGRDG S C+L S SD R
Sbjct: 659 VICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLPSECILLCSPSDKQRH 718
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
+ MI G N + +T+ +L RM++Y NDV CRR+ QL +FG
Sbjct: 719 EQMIY-----------GSNDW---------KTSMSSLYRMLAYTMNDVHCRRMQQLGYFG 758
Query: 771 EKFDSAHCKK-------TCDNC-SKIKSFIEKDVTDTAKKLVELVKLTGQ--QFSSSHIL 820
E D +C K TCDNC SK EK D + LV+L + +S ++
Sbjct: 759 EDMDEHYCLKQPEGSVATCDNCASKRSERWEKGELDVSAILVDLFNIIVHLGSLTSKQLI 818
Query: 821 EVFRGSLNQYVKKHRHETLSLHGAGKH--LAKSEASRILRHLVIEDFLM 867
V+RG+ + V K + GA L IL +V+E L+
Sbjct: 819 GVYRGTAD--VGKAVETRMRQAGAPPEYKLGARHTKFILERVVLEALLL 865
>gi|282896865|ref|ZP_06304871.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
gi|281198274|gb|EFA73164.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
Length = 719
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 242/658 (36%), Positives = 357/658 (54%), Gaps = 76/658 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE KK FG FRP QR+II + D+ V+MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 6 LEKELKKYFGYDQFRPGQRQIIEDALENRDLMVVMPTGGGKSLCFQLPALLKPGLTVVVS 65
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L NI AT ++ ++ T Q RE K KLLYV PE++ S+
Sbjct: 66 PLIALMQDQVEALRNNNISATLINSSL--TTYQVRSREEAIMNGKVKLLYVAPERLV-SE 122
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ + + LA VIDEAHCVS+WGHDFRP+Y+ L +L+++F + P +ALTATAT
Sbjct: 123 RFLPILDVVKEKFGLANFVIDEAHCVSEWGHDFRPEYRQLILLRKRFSHVPTIALTATAT 182
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERLQVGLSYGHFFLLK 612
V+ D++Q LGL + SFNR NL+ + ++ E ++ G + L
Sbjct: 183 DRVRADIIQQLGLKQPAVHIASFNRQNLYYEVRPKNRNSYGEILEIIKKNEGSGIIYCLT 242
Query: 613 EFYV----VSLECGHKAAF-YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + L+ AA YH + +RA Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 243 RKNVDELTLKLQNSQIAALPYHAGLVDQERAKNQTRFIRDDVRIMVATIAFGMGINKPDV 302
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH LP+++E Y+QE GRAGRDG+ S C L++S+SD ++ I + Q
Sbjct: 303 RFVIHCDLPRNLESYYQESGRAGRDGEPSRCTLFFSFSDVKTIEWSIGKKTDPQEQLIA- 361
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ L +++ Y E DCRR +QL +FGE+F C CDNC
Sbjct: 362 ----------------KQQLRQVIDYAEG-TDCRRTIQLGYFGERFPGG-C-ANCDNCRY 402
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K +D T A K + V +++ +HI++V RG+ NQ + H+H+ LS +G GK
Sbjct: 403 PKPL--QDWTVEAMKFLSCVARCQEKYGMNHIIDVLRGAKNQKISLHKHDQLSTYGIGKD 460
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E + R L+ + L + D Y SVLK+N ++ +Q VL
Sbjct: 461 KTADEWKMLCRSLLHQGLLEQ---THDGY----SVLKLNALSWE--VMRKQRQVL----- 506
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
I + K+D+ N L++ A L + LR LR + E
Sbjct: 507 IAAPVYQKADLVAI---------------------NTKALDIEA-LMNELRYLRKQIADE 544
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
G+ Y IF ++T++ +++ PRT EEL +I+G+ KV++YG R L I+S I+E
Sbjct: 545 L--GLAPYIIFQDSTVRLMAQIKPRTLEELGQISGVVSYKVNQYGERFLAVIQSYIQE 600
>gi|407860729|gb|EKG07462.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1310
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 230/572 (40%), Positives = 317/572 (55%), Gaps = 63/572 (11%)
Query: 369 KWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLP 428
++S +F W+ L VFG H +R Q EI+NA M G D FVL+PTGGGKSL YQLP
Sbjct: 216 RYSGENFSWSADLRRTMIDVFGLHQYRFLQLEIMNACMDGRDAFVLLPTGGGKSLCYQLP 275
Query: 429 ALIC-PG-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY 486
AL+ P +T+VISPL+SLIQDQ+ L+ +IPA L+G ++ + E S +
Sbjct: 276 ALMPNPAQVTIVISPLISLIQDQVYALIANDIPAIALTGQTSDAPRRALFAEWASGRIVH 335
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
L+YVTPE +SD ++ L L +R LL+R V+DEAHCVSQWGHDFRPDY+ L ILKQ
Sbjct: 336 TLVYVTPEYFGRSDHFVQCLVHLASRGLLSRFVVDEAHCVSQWGHDFRPDYRKLAILKQH 395
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL-QVGLSY 605
FP P+ ALTATAT V++D++ L L + ++F+ SFNR NL KV + QV +
Sbjct: 396 FPAIPISALTATATDMVQQDIITTLRLQDALVFKGSFNRQNLSYSVRKVGRSVGQVVVDL 455
Query: 606 -GHFFLLKEFYVVSL----EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
H F + +V +C G +A++YH + + + Q++W+KDE+
Sbjct: 456 IKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHA--EASGKNEKQERWTKDELQ 513
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGINKPDVRFVIH ++PKSIEGY+QE GRAGRDG S C+L S SD R
Sbjct: 514 VICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLLSECILLCSPSDKQRH 573
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
+ MI G N + +T+ +L RMV+Y NDV CRR+ QL +FG
Sbjct: 574 EQMIY-----------GSNDW---------KTSMSSLYRMVAYTMNDVHCRRMQQLGYFG 613
Query: 771 EKFDSAHCKK-------TCDNCSKIKS----FIEKDVTDTAKKLVELVKLTGQQFSSSHI 819
E D +C K TCDNC+ +S E DV+ L ++ G +S +
Sbjct: 614 EDMDEHYCLKQPEGSVATCDNCASKRSDRWETGELDVSAIVIDLFNIIVHLG-SLTSKQL 672
Query: 820 LEVFRGSLNQYVKKHRHETLSLHGAGKH--LAKSEASRILRHLVIEDFL-------MEEV 870
+ V+RG+ + V K + GA L IL +V+E L +E V
Sbjct: 673 IGVYRGTAD--VGKAVETRMRQAGAPPEYKLGARHTKFILERVVLEALLLGIFKERLERV 730
Query: 871 KKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
+ + V H++ GR+ +VL
Sbjct: 731 TDFVTCAYLEAGEGVGIKAYHDVQSGRRRIVL 762
>gi|218245896|ref|YP_002371267.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
gi|218166374|gb|ACK65111.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
Length = 709
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 241/659 (36%), Positives = 363/659 (55%), Gaps = 77/659 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE + K FG SFRP Q +II + D+ V+MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 7 LEQSLKYFFGYDSFRPGQAKIIQEALQNRDLLVIMPTGGGKSLCFQLPALLKPGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ LL I ATFL+ +++ E + RE K KLLYV PE++ +D
Sbjct: 67 PLIALMQDQVDTLLDNGIGATFLNSSLKSEEVRS--REQAIIKGKIKLLYVAPERLL-ND 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L+ L + ++ IDEAHCVS+WGHDFRP+Y+ L L+Q++P P+LALTATAT
Sbjct: 124 KFTPFLDFLAEKIGVSFFAIDEAHCVSEWGHDFRPEYRQLKQLRQRYPQVPMLALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVG--LSY-------GHFFLL 611
V+ED++ L L I SFNRPNL D + ER LSY G + L
Sbjct: 184 KRVREDIIHQLALKQPGIHITSFNRPNLDYDVQ-FKERRSYNKLLSYIRQQKGSGIVYCL 242
Query: 612 KEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
V + G KA YH + RA Q ++ +D++ ++ AT+AFGMGINKPD
Sbjct: 243 SRRSVDDIAFRLQNDGIKALPYHAGMADEARALNQNRFIRDDVQVMVATIAFGMGINKPD 302
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH+ LP+++EGY+QE GRAGRDG+ + C L++S SD +++++I Q Q
Sbjct: 303 VRFVIHYDLPRNLEGYYQESGRAGRDGEPAECTLFFSLSDLKKIEYLIDQKSTPQEQ--- 359
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ + L ++V Y E +CRR + L +FGE+F + +C K CDNC
Sbjct: 360 --------------KIARQQLRQVVDYAEG-TECRRTIVLRYFGERF-AGNCGK-CDNCR 402
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
K +D T A+K + V ++F +HI++V RGS + ++++ H LS +G G+
Sbjct: 403 DPKPL--EDWTIEAQKFLSCVARCRERFGMTHIIDVLRGSKKRKIEQNGHHLLSTYGIGQ 460
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +E + R L+ + L E SD + SVLK+N+ ++ +Q V
Sbjct: 461 DRSVAEWKMLGRSLIHQGLLDE---TSDGF----SVLKLNKGSWE--VLRKQRTV----- 506
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
+ +T A S + G+ +P E++L L+ LR LR L
Sbjct: 507 --------EIAITQASASKVLGEYNPR--------AAEIEL-----LFERLRQLRKQLAD 545
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y IF +++L+ +++ P+T EE +I+G+ K+S+YG R L I + +E
Sbjct: 546 --SNQIAPYVIFADSSLRLMAQLKPKTLEEFAKISGVTDYKLSQYGERFLSEIRAFSQE 602
>gi|409911451|ref|YP_006889916.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens KN400]
gi|298505021|gb|ADI83744.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens KN400]
Length = 603
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 234/651 (35%), Positives = 348/651 (53%), Gaps = 76/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFRP Q EI++ G D FVLMPTGGGKSL YQ+P+L+ PG+ +VISPL+SL
Sbjct: 10 RTVFGYRSFRPFQEEIVDRVARGGDTFVLMPTGGGKSLCYQIPSLVRPGVGIVISPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + + A + + E +++L L+ + LLYV PE++ +D L +
Sbjct: 70 MKDQVDALRENGVAAACYNSTLGERESRQVLARLHGG--ELDLLYVAPERL-MTDAFLER 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + +A IDEAHCVSQWGHDFRP+Y LG L+ FP P++ALTATA A +
Sbjct: 127 LREIP----IALFAIDEAHCVSQWGHDFRPEYVELGRLRGLFPTVPMIALTATADAQTRG 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFFLLKEFYVV 617
D+V LGL + +F F+RPN+ ++ +K +L+ L+ G + L V
Sbjct: 183 DIVTRLGLRDAEMFVTGFDRPNIRYSVLEKQKPFRQLEEFLATRPREAGIVYCLSRKRVE 242
Query: 618 SLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+ G +AA YH + A+R+ VQ+ + +D+I ++ ATVAFGMGI+KP+VRFV+H
Sbjct: 243 EVAEKLRAAGVEAAAYHAGLADAERSRVQEAFLRDDIRVVVATVAFGMGIDKPNVRFVVH 302
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI-SQGVAEQSPFTPGHNRF 731
+ LPK+IE Y+QE GRAGRDG + +L + Y D + +I S G EQ
Sbjct: 303 YDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIPVSRSLIESGGNPEQ---------- 352
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ L MV + E V CRR L +FGE+ + + C NC
Sbjct: 353 --------VRIELHKLNAMVGFAEALV-CRRRALLGYFGERLE-----EPCGNCDLCLDP 398
Query: 792 IEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
E D T+ A+K + V GQ+F + H+++V RGS ++ + H+ LS +G G LA
Sbjct: 399 PETFDATEEARKALSCVYRVGQRFGAGHVIDVLRGSRSERILALGHDRLSTYGIGAGLAA 458
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I+R L+ +L +++ SVLK+ + A L+ G +N+VL P
Sbjct: 459 EAWGSIIRQLIHRGYLEQDLAN-------YSVLKLTPA-ARPLLRGEENLVLAKP----- 505
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+L + +P + P +P + +L+ LR LR L + +
Sbjct: 506 -RLRMA--------------APKKEKAPRRPGAAMPAERDEELFQELRALRKRLADD--Q 548
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
V Y IF +ATL ++ P T EELL +NG+G+ K+ +YG LE I S
Sbjct: 549 QVPPYIIFSDATLAEMASLRPTTPEELLRVNGVGERKLGRYGAPFLEAIRS 599
>gi|334121014|ref|ZP_08495090.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
gi|333455733|gb|EGK84376.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
Length = 731
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 237/665 (35%), Positives = 360/665 (54%), Gaps = 91/665 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG SFRP Q+EI+ A + D+ ++MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 15 LEQALKHFFGYDSFRPGQQEIVEAALQKRDMMIVMPTGGGKSLCFQLPALLKPGLTVVVS 74
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + Q+ RE K KLLYV PE++ +
Sbjct: 75 PLIALMQDQVEALQDNGIGATFLNSTL--SSQETRSRETAILEGKIKLLYVAPERLL-GE 131
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ + + ++ IDEAHCVS+WGHDFRP+Y+ + ++ ++P+ P++ LTATAT
Sbjct: 132 RFLPFLDIVANKLGISAFAIDEAHCVSEWGHDFRPEYRQMQRVRDRYPDIPIMGLTATAT 191
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-----KVAERLQV----GLSYGHFFLL 611
V++D++Q L L N I SFNRPNL+ + AE LQ+ G S G + L
Sbjct: 192 ERVRQDIIQQLTLRNPYIHVASFNRPNLYYEVRPKTKHSFAEVLQIIKKKGGS-GIIYCL 250
Query: 612 KEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
V + + G +A YH ++ RA Q ++ +D++ ++ AT+AFGMGINKPD
Sbjct: 251 SRKKVDEVAYKLQQSGIQALPYHAGMNDVDRATNQTRFIRDDVQVMVATIAFGMGINKPD 310
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH+ LPK++EGY+QE GRAGRD + + C L++ Y D + ++I EQ P P
Sbjct: 311 VRFVIHYDLPKNLEGYYQESGRAGRDNEPAHCSLFFGYGDVKMIDYII-----EQKP-DP 364
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
R + L R+++Y E+ DCRR +QL +FG+ F +C TCDNC
Sbjct: 365 QEQRI-----------ARQQLRRVINYAES-TDCRRTIQLSYFGDSF-PGNC-GTCDNCC 410
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
K +D T A K + V ++F +HI++V RGS NQ + +++H LS +G GK
Sbjct: 411 NQKPV--EDWTIEAMKFLSCVARCQEKFGMNHIIDVLRGSKNQKILQYQHHQLSTYGIGK 468
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ E ++ R L+ + FL E K+D + +LK+N+ I+ RQ V
Sbjct: 469 DRSAEEWKKLSRSLLNQGFLDE---KTDGF----PILKLNEKSWE--IMKRQRTV----- 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSA------KLYSSLRML 960
+ +PQ EV + + L++ LR L
Sbjct: 515 -----------------------------EIAIEPQREVQGKVRSLAVEVEGLFTVLRTL 545
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + E + V Y +F + +L+ ++++ P+ E E+ G+G K KYG LE I
Sbjct: 546 RKQIADE--QFVPPYVVFADKSLRDMAEKRPQNLREFEEVYGVGSNKRDKYGKVFLEAIR 603
Query: 1021 STIKE 1025
+ +E
Sbjct: 604 NFCQE 608
>gi|390440423|ref|ZP_10228752.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
gi|389836165|emb|CCI32878.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
Length = 703
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/645 (35%), Positives = 362/645 (56%), Gaps = 75/645 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + +E RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRE--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSY-------GHFFLLK 612
V+ED++Q LGL + I SFNRPNL+ + + K ++ Q Y G + +
Sbjct: 184 QQVREDIIQQLGLRDTSIHTASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKGSGIVYCIS 243
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G A YH +D +R+ Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 244 RKTVDKVAEQLQKDGIDALPYHAGMDDRERSENQTRFIRDDVQIMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 304 RFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ------- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N R + L +++ Y E +CRR L +FGE F + +C CDNC
Sbjct: 357 ----NEQQKAR------QQLRQVLDYAEG-TECRRSSVLGYFGESF-AGNC-GNCDNCRN 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K+ +D T A+K + V TGQ+F HI+ V RG + + +++H LS +G GK
Sbjct: 404 GKN--NQDWTIEAQKFLSCVARTGQKFGMMHIINVLRGRKGERISQYQHHLLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+ R LV ++ L+E + D +LK+NQ + ++ +++V + P
Sbjct: 462 KTVEEWKRLSRSLVQQNILVE--TEDDF-----RILKLNQH-SWEVMRKQRSVFIAVPQK 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
N G ++ +D P+ ++++ L+ LR LR +
Sbjct: 514 AN-------------GQIVG-------DDNPNMVESDL-------LFERLRQLRKKIAD- 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+GV Y IF +++L+ +++ PR + +I+G+ +KV +YG
Sbjct: 546 -SQGVPPYVIFHDSSLRLMAQSKPRNLGQFRQISGVVHSKVQQYG 589
>gi|422302785|ref|ZP_16390144.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
gi|389787941|emb|CCI16794.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
Length = 703
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 234/645 (36%), Positives = 362/645 (56%), Gaps = 75/645 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + +E RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRE--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSY-------GHFFLLK 612
V+ED++Q LGL + I SFNRPNL+ + + K ++ Q Y G + +
Sbjct: 184 QQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKGAGIVYCIS 243
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 244 RKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 304 RFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ------- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N R + L +++ Y E +CRR L +FGE F S +C CDNC
Sbjct: 357 ----NEQQKAR------QQLRQVLDYAEG-TECRRSSVLGYFGESF-SGNC-ANCDNCRN 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +D T A+K + V TGQ+F HI+ V RG + + +++H LS +G GK
Sbjct: 404 GNN--SEDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+ R LV ++ L+E + D +LK+NQ + ++ +++V + P
Sbjct: 462 KTVGEWKRLSRSLVQQNLLVE--TEDDF-----RILKLNQH-SWEVMRKQRSVFIAVPQ- 512
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
AKG +L +D P+ ++++ L+ LR LR +
Sbjct: 513 ------------KAKGQILG-------DDNPNTLESDL-------LFDRLRQLRKKIAD- 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+GV Y IF +++L+ +++ PR + +I+G+ +KV +YG
Sbjct: 546 -SQGVPPYVIFHDSSLRLMAQSKPRNLGQFRQISGVVHSKVQQYG 589
>gi|410080512|ref|XP_003957836.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
gi|372464423|emb|CCF58701.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
Length = 873
Score = 371 bits (953), Expect = e-99, Method: Compositional matrix adjust.
Identities = 230/590 (38%), Positives = 332/590 (56%), Gaps = 60/590 (10%)
Query: 365 SNDQKWSSWDFP--WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKS 422
SND + S D+ W+ +L + VF +FR +Q INAT+SG DVF+LMPTGGGKS
Sbjct: 202 SNDNRSSEDDYNHLWSGELVYKLQNVFKLPNFRSDQLSAINATLSGDDVFILMPTGGGKS 261
Query: 423 LTYQLPALICPGIT----LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRE 478
L YQLP++I G+T +VISPL+SL+QDQI HLLQ NI A +S + T Q+
Sbjct: 262 LCYQLPSIIRSGVTCGTTIVISPLISLMQDQIDHLLQLNIKACSISSKLS-TSQRNFYFS 320
Query: 479 L--NSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPD 536
L N D LLY++PE + S L+ L+ LARI +DEAHC+S WGHDFRPD
Sbjct: 321 LFANGDL---DLLYISPEMLTASKKFKTTLDKLHKSRKLARIAVDEAHCLSNWGHDFRPD 377
Query: 537 YQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC---- 592
Y+ L + +P+ P++ALTATA V++D+++ L L ++ +QSFNR NL+ +
Sbjct: 378 YKNLDYFRINYPDIPIVALTATANNLVQDDIIRNLRLGRPLVLKQSFNRNNLFYEVLPKD 437
Query: 593 -----EKVAERL------QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFV 640
++A + Q G+ Y H E ++L + G KA+FYH + QR V
Sbjct: 438 KKIVTSQIASYILNDFKSQSGIVYCHSKDTCEKVSMALTQMGVKASFYHAGMTNKQRDHV 497
Query: 641 QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVL 700
QK W + +ICATVAFGMGI+K DVRFVIH+++P+S+EGY+QE GRAGRDG S C+
Sbjct: 498 QKLWQSNRYQVICATVAFGMGIDKADVRFVIHYTVPRSLEGYYQETGRAGRDGNFSYCIT 557
Query: 701 YYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDC 760
+YS++D ++ +I G N+ N T+ + L +++YCEN ++C
Sbjct: 558 FYSFNDVRSLQKLIQTD--------KGLNKENKL-------THLDKLQHVMAYCENTINC 602
Query: 761 RRLLQLVHFGEKFDSAHCKKTCDNCSK----IKSFIEKDVTDTAKKLVELVK-LTGQQFS 815
RR L +F E+FD C K CDNC + + +E DVTD + ++ LV+ + ++ +
Sbjct: 603 RRKQILSYFNEEFDVNLCHKNCDNCLRNVDGNSNVVESDVTDASISIINLVQSIQNERVT 662
Query: 816 SSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE--VKKS 873
+ ++ RGS + + H+ L HG K K RI HLV ++ L E V KS
Sbjct: 663 IIYCQDILRGSKMTKIVQAGHDKLPEHGILKSNKKENLERIFFHLVTKNILQEYSIVNKS 722
Query: 874 DVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF------PSAINSTKLSKSD 917
G S+ +K+ + A L G V L+ PS NS + K+D
Sbjct: 723 ---GFGSNYVKLGKMAAQ-LKKGILKVKLKLVTMPSTPSGENSALVGKTD 768
>gi|343473260|emb|CCD14808.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 1399
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 218/535 (40%), Positives = 298/535 (55%), Gaps = 64/535 (11%)
Query: 321 SEGYGNWNSSSVSFSSVDRLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWSSWDFPWTKK 380
+ G W + + DR G S+ P P + V+ +E +S FPW+ +
Sbjct: 368 TSGRFTWEACEQALLRSDRQGCSNGP-------PVPLPVSDVE-----NYSGEGFPWSAE 415
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-PG-ITLV 438
L VFG H +R Q EI+NA M DVFVL+PTGGGKSL YQLPAL+ P +T+V
Sbjct: 416 LRRVMIDVFGLHQYRFLQLEIMNACMDERDVFVLLPTGGGKSLCYQLPALLPNPAQVTIV 475
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
ISPL+SLIQDQ+ L+ IP+ L+G + ++++ E L+YVTPE +
Sbjct: 476 ISPLISLIQDQVYALMANGIPSMALTGQTNDSAKRKLFNEWAMGQISCALVYVTPEYFGR 535
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
SD ++ L + +R LL R VIDEAHCVSQWGHDFRPDY+ L +LKQ+FP TP+ ALTAT
Sbjct: 536 SDYFVQSLSRVASRGLLNRFVIDEAHCVSQWGHDFRPDYRKLAMLKQQFPTTPISALTAT 595
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE---------------RLQVGL 603
AT V++DVV+ LGL ++FR SFNR NL KV + R G+
Sbjct: 596 ATDVVQQDVVRTLGLQKALMFRGSFNRSNLGYSVRKVGKGVAEVVADIIKNQFPRRSCGI 655
Query: 604 SYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y E +L G +A++YH D ++ Q+QW+KDE+ ++CAT+AFGMGI
Sbjct: 656 VYCLSRKNCENMSKALTAHGIRASYYHSDAD--EKNERQEQWTKDELQVLCATIAFGMGI 713
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
NKPDVRFVIH ++PKSIEGY+QE GRAGRDG S C+L YS +D HMI
Sbjct: 714 NKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLASQCILLYSPNDKHCHSHMIY------- 766
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC---- 778
G + + S +L M++Y N+V CRR+ QL HFGE +C
Sbjct: 767 ----GTKDWRASLS---------SLTHMLAYTLNNVQCRRMQQLGHFGEHVSDQYCLLQP 813
Query: 779 ---KKTCDNCSKIK----SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
+ CDNC+ K KD+T L +++ G + + ++ V+RG+
Sbjct: 814 DGSVEVCDNCASRKRDKWEPTAKDITPILLDLFDIIVYLG-SLTQNQLIAVYRGT 867
>gi|425461242|ref|ZP_18840722.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
gi|389825935|emb|CCI23927.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
Length = 701
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 231/650 (35%), Positives = 362/650 (55%), Gaps = 85/650 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKVLKYHFGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + ++ RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRD--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE------- 613
V+ED++Q LGL + I SFNRPNL+ + R + SY + +
Sbjct: 184 QQVREDIIQQLGLRDASIHIASFNRPNLYYEV-----RAKTSKSYQQLYQYIKGKKGSGI 238
Query: 614 FYVVSLEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y +S + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGI
Sbjct: 239 VYCISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGI 298
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
NKPDVRFV+H+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 299 NKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ-- 356
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
N R + L +++ Y E +CRR L +FGE F + +C C
Sbjct: 357 ---------NEQQKAR------QQLRQVLDYAEG-TECRRSSVLGYFGESF-AGNCG-NC 398
Query: 783 DNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
DNC + +D T A+K + V TGQ+F HI+ V RG + + +++H LS +
Sbjct: 399 DNCRNGNN--SEDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTY 456
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK E R+ R LV ++ L+E D + +LK+NQ + ++ +++V +
Sbjct: 457 GIGKDKTLGEWKRLSRSLVQQNLLIE---TEDNF----RILKLNQH-SWEVMRKQRSVFI 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P N G +L +D P+ ++++ L+ LR LR
Sbjct: 509 AVPQKAN-------------GQILG-------DDNPNTMESDL-------LFDRLRQLRK 541
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+ +GV Y IF +++L+ +++ PR+ E+ +I+G+ ++KV +YG
Sbjct: 542 KIAD--SQGVPPYVIFHDSSLRLMAQSKPRSLEQFRQISGVVQSKVQQYG 589
>gi|257058944|ref|YP_003136832.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
gi|256589110|gb|ACU99996.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
Length = 709
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 241/659 (36%), Positives = 364/659 (55%), Gaps = 77/659 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE + K FG SFRP Q +II + D+ V+MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 7 LEQSLKYFFGYDSFRPGQAKIIQEALQNRDLLVIMPTGGGKSLCFQLPALLKPGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ LL I ATFL+ +++ E + RE K KLLYV PE++ +D
Sbjct: 67 PLIALMQDQVDTLLDNGIGATFLNSSLKSEEVRS--REQAIIKGKIKLLYVAPERLL-ND 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L+ + + ++ IDEAHCVS+WGHDFRP+Y+ L L+Q++P P+LALTATAT
Sbjct: 124 KFTPFLDFIAEKIGVSFFAIDEAHCVSEWGHDFRPEYRQLKQLRQRYPQVPMLALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVG--LSY-------GHFFLL 611
V+ED++ L L I SFNRPNL D + ER LSY G + L
Sbjct: 184 KRVREDIIHQLELKQPGIHITSFNRPNLDYDVQ-FKERRSYNKLLSYIRQQKGSGIVYCL 242
Query: 612 KEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
V + G KA YH + RA Q ++ +D++ ++ AT+AFGMGINKPD
Sbjct: 243 SRRSVDDIAFRLQNDGIKALPYHAGMADEARALNQNRFIRDDVQVMVATIAFGMGINKPD 302
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH+ LP+++EGY+QE GRAGRDG+ + C L++S SD +++++I Q TP
Sbjct: 303 VRFVIHYDLPRNLEGYYQESGRAGRDGEPAECTLFFSLSDLKKIEYLIDQKS------TP 356
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ + L ++V Y E +CRR + L +FGE+F + +C K CDNC
Sbjct: 357 QEQKI-----------ARQQLRQVVDYAEG-TECRRTIVLRYFGERF-AGNCGK-CDNCR 402
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
K +D T A+K + V ++F +HI++V RGS + ++++ H LS +G G+
Sbjct: 403 DPKPL--EDWTIEAQKFLSCVARCRERFGMTHIIDVLRGSKKRKIEQNGHHLLSTYGIGQ 460
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +E + R L+ + L E SD + SVLK+N+ ++ +Q V
Sbjct: 461 DRSVAEWKMLGRSLIHQGLLDE---TSDGF----SVLKLNKGSWE--VLRKQRTV----- 506
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
+ +T A S + G+ +P E++L L+ LR LR L
Sbjct: 507 --------EIAITQASASKVLGEYNPR--------AAEIEL-----LFERLRQLRKQLAD 545
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y IF +++L+ +++ P+T EE +I+G+ K+S+YG R L I + +E
Sbjct: 546 --SNQIAPYVIFADSSLRLMAQLKPKTLEEFAKISGVTDYKLSQYGERFLSEIRAFSQE 602
>gi|282898834|ref|ZP_06306821.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
gi|281196361|gb|EFA71271.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
Length = 719
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 240/658 (36%), Positives = 356/658 (54%), Gaps = 76/658 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE KK FG FRP QR+II + D+ V+MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 6 LEKEFKKYFGYDQFRPGQRQIIEDALENRDLMVVMPTGGGKSLCFQLPALLKPGLTVVVS 65
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L NI AT ++ ++ T Q RE K KLLYV PE++ S+
Sbjct: 66 PLIALMQDQVEALRNNNISATLINSSL--TTYQVRSREEAIMNGKVKLLYVAPERLV-SE 122
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ + + LA VIDEAHCVS+WGHDFRP+Y+ L +L+++F + P +ALTATAT
Sbjct: 123 RFLPILDVVKEKFGLANFVIDEAHCVSEWGHDFRPEYRQLILLRKRFSHVPTIALTATAT 182
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERLQVGLSYGHFFLLK 612
V+ D++Q LGL + SFNR NL+ + ++ E ++ G + L
Sbjct: 183 DRVRADIIQQLGLKQPAVHIASFNRQNLYYEVRPKNRNSYGEILEIIKENEGSGIIYCLT 242
Query: 613 EFYV----VSLECGHKAAF-YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + L+ AA YH + +RA Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 243 RKNVDELTLKLQNSQIAALPYHAGLVDYERAKNQTRFIRDDVRIMVATIAFGMGINKPDV 302
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH LP+++E Y+QE GRAGRDG+ S C L++S+ D ++ I + Q
Sbjct: 303 RFVIHCDLPRNLESYYQESGRAGRDGEPSRCTLFFSFGDVKTIEWSIGKKTDPQEQLIA- 361
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ L +++ Y E DCRR +QL +FGE+F + C CDNC
Sbjct: 362 ----------------KQQLRQVIDYAEG-TDCRRTIQLGYFGERFPGS-C-ANCDNCRY 402
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K +D T A K + V +++ ++I++V RG+ NQ + H+H+ LS +G GK
Sbjct: 403 PKPL--QDWTVEAMKFLSCVARCQEKYGMNYIIDVLRGTKNQKIALHKHDQLSTYGIGKD 460
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E + R L+ + L + +D Y SVLK+N + RQ +
Sbjct: 461 KTADEWKMLCRSLLHQGLLEQ---TNDGY----SVLKLNPLSWEVMRKQRQ-------VS 506
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
I + K+D+ N L++ A L + LR LR + E
Sbjct: 507 IAAPVYQKADLVAV---------------------NTKALDIEA-LMNELRQLRKQIADE 544
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
G+ Y IF ++TL+ +++ PRT EEL +I+G+ KV++YG R L I+S I+E
Sbjct: 545 L--GLAPYIIFQDSTLRLMAQIKPRTLEELGQISGVVSYKVNQYGERFLAVIQSYIQE 600
>gi|440756898|ref|ZP_20936098.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
gi|440172927|gb|ELP52411.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
Length = 701
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 231/650 (35%), Positives = 362/650 (55%), Gaps = 85/650 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKVLKHHFGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + ++ RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRD--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE------- 613
V+ED++Q LGL + I SFNRPNL+ + R + SY + +
Sbjct: 184 QQVREDIIQQLGLRDASIHIASFNRPNLYYEV-----RAKTSKSYQQLYQYIKGQKGSGI 238
Query: 614 FYVVSLEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y +S + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGI
Sbjct: 239 VYCISRKTVDQVAEQLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGI 298
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
NKPDVRFV+H+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 299 NKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ-- 356
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
N R + L +++ Y E +CRR L +FGE F + +C C
Sbjct: 357 ---------NEQQKAR------QQLRQVLDYAEG-TECRRSSVLGYFGESF-AGNCG-NC 398
Query: 783 DNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
DNC + +D T A+K + V TGQ+F HI+ V RG + + +++H LS +
Sbjct: 399 DNCRNGNN--SEDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGEKITQYQHHLLSTY 456
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK E R+ R LV ++ L+E D + +LK+NQ + ++ +++V +
Sbjct: 457 GIGKDKTLGEWKRLSRSLVQQNLLVE---TEDNF----RILKLNQH-SWEVMRKQRSVFI 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P N G +L +D P+ ++++ L+ LR LR
Sbjct: 509 AVPQKAN-------------GPILG-------DDNPNTMESDL-------LFDRLRQLRK 541
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+ +GV Y IF +++L+ +++ PR+ E+ +I+G+ ++KV +YG
Sbjct: 542 KIAD--SQGVPPYVIFHDSSLRLMAQSKPRSLEQFRQISGVVQSKVQQYG 589
>gi|425450984|ref|ZP_18830806.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
gi|389767941|emb|CCI06812.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
Length = 701
Score = 371 bits (952), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 364/645 (56%), Gaps = 75/645 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKVLKYHFGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + ++ RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRD--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSY-------GHFFLLK 612
V+ED++Q LGL + I SFNRPNL+ + + K ++ Q Y G + +
Sbjct: 184 QQVREDIIQQLGLRDASIHIASFNRPNLYYEVQPKTSKSYQQLYQYIKGKKGSGIVYCIS 243
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 244 RKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 304 RFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ------- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N R + L +++ Y E +CRR L +FGE F + +C CDNC
Sbjct: 357 ----NEQQKAR------QQLRQVLDYAEG-TECRRSSVLGYFGESF-AGNCG-NCDNCRN 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +D T A+K + V TGQ+F HI+ V RG + + +++H LS +G GK
Sbjct: 404 GNN--SEDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+ R LV ++ L+E D + +LK+NQ + ++ +++V + P
Sbjct: 462 KTLGEWKRLSRSLVQQNLLVE---TEDNF----RILKLNQH-SWEVMRKQRSVFIAVPQK 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
N G +L +D P+ ++++ L+ LR LR +
Sbjct: 514 AN-------------GPILG-------DDNPNTMESDL-------LFDRLRQLRKKIAD- 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+GV Y IF +++L+ +++ PR+ E+ +I+G+ ++KV +YG
Sbjct: 546 -SQGVPPYVIFHDSSLRLMAQSKPRSLEQFRQISGVVQSKVQQYG 589
>gi|427416527|ref|ZP_18906710.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
gi|425759240|gb|EKV00093.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
Length = 736
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 245/700 (35%), Positives = 371/700 (53%), Gaps = 99/700 (14%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
FP LEA K FG FR QR II + DV V+MPTGGGKSL YQLPAL+ G
Sbjct: 10 FP---SLEAALKHFFGYDDFRHYQRAIIEQVLKNQDVLVIMPTGGGKSLCYQLPALLRLG 66
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTE----QQEILRELNSDYCKYKLLY 490
+T+V+SPL++L+QDQ+ L I ATFL+ ++ + E +Q +LR KLLY
Sbjct: 67 VTIVVSPLIALMQDQVRSLEDNGIAATFLNSSLTFNEVRDREQALLR------GDIKLLY 120
Query: 491 VTPEKVAKSDV--LLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
+ PE++ LL Q++ L+ IDEAHCVS+WGHDFRP+Y+ L LKQ+FP
Sbjct: 121 LAPERLMNPSFWPLLEQIQQTVG---LSAFAIDEAHCVSEWGHDFRPEYRQLFQLKQQFP 177
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHF 608
PV+ALTATAT V++D++Q L L + +F FNR NL+ + ++ SY H
Sbjct: 178 QVPVMALTATATERVRQDIIQQLRLNDPQVFVSGFNRQNLYYEVTPKTKQ-----SYDHL 232
Query: 609 F-LLKE------FYVVSLECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEIN 650
L+K+ Y +S + ++ AF YH + +R Q+Q+ +D++
Sbjct: 233 LKLVKQQSGAGIIYCLSRKRVNEIAFRLKQDGISALPYHAGLSAKERQGNQEQFIRDDVR 292
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
II AT+AFGMGINKPDVRFVIH+ LP++IE Y+QE GRAGRDG ++C +++SY+D V
Sbjct: 293 IIVATIAFGMGINKPDVRFVIHYDLPRTIESYYQESGRAGRDGDPANCTVFFSYADVATV 352
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
+++ISQ EQ + L +++Y E+ V CRR +QL +FG
Sbjct: 353 EYLISQKPDEQEQ-----------------RIARQQLRHVINYAESAV-CRRKIQLSYFG 394
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQY 830
E F +C + CDNC + +D T A+K + V ++F +HI++V RGS +
Sbjct: 395 ESF-PGNC-QNCDNC--LNPVPLEDWTIEAQKFLSCVARCQERFGMNHIIDVLRGSRKKR 450
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
+ + H+ LS +G G+ + + ++ R L+ ++ L E +D Y SVLK+N
Sbjct: 451 LMELGHDQLSTYGIGQDHSVDDWRQLCRSLLHQELLAE---TTDGY----SVLKLNSGSW 503
Query: 891 HNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLS 950
VL+ +N +++ T A ++ +EV LN
Sbjct: 504 Q---------VLKKEIPVNIHVFQRAESTKA-----------------TKASDEVQLNAD 537
Query: 951 AK-LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVS 1009
L LR LR L E + V Y +F +A+L+ ++++ P T E I+G+G+ K+
Sbjct: 538 ETLLLEQLRSLRKRLADE--QSVPPYIVFADASLRQMAQQRPITTEAFATISGVGRRKLE 595
Query: 1010 KYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDE 1049
+YG I+ + T N +S+ + +R +E
Sbjct: 596 QYGQVFTNEIQHFCQSHNLTPNNNITSSPATTETRRSSNE 635
>gi|425433706|ref|ZP_18814184.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
gi|389675683|emb|CCH95185.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
Length = 701
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 364/645 (56%), Gaps = 75/645 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKVLKYHFGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + ++ RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRD--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSY-------GHFFLLK 612
V+ED++Q LGL + I SFNRPNL+ + + K ++ Q Y G + +
Sbjct: 184 QQVREDIIQQLGLRDASIHIASFNRPNLYYEVQPKTSKSYQQLYQYIKGKKGSGIVYCIS 243
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 244 RKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 304 RFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ------- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N R + L +++ Y E +CRR L +FGE F + +C CDNC
Sbjct: 357 ----NEQQKAR------QQLRQVLDYAEG-TECRRSSVLGYFGESF-AGNC-GNCDNCRN 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +D T A+K + V TGQ+F HI+ V RG + + +++H LS +G GK
Sbjct: 404 GNN--SEDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+ R LV ++ L+E D + +LK+NQ + ++ +++V + P
Sbjct: 462 KTLGEWKRLSRSLVQQNLLVE---TEDNF----RILKLNQH-SWEVMRKQRSVFIAVPQK 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
N G +L +D P+ ++++ L+ LR LR +
Sbjct: 514 AN-------------GPILG-------DDNPNMVESDL-------LFERLRQLRKKIAD- 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+GV Y IF +++L+ +++ PR+ E+ +I+G+ ++KV +YG
Sbjct: 546 -SQGVPPYVIFHDSSLRLMAQSKPRSLEQFRQISGVVQSKVQQYG 589
>gi|443668675|ref|ZP_21134223.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
gi|159029588|emb|CAO90247.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330750|gb|ELS45444.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
Length = 701
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 231/650 (35%), Positives = 362/650 (55%), Gaps = 85/650 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKVLKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + ++ RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRD--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE------- 613
V+ED++Q LGL + I SFNRPNL+ + R + SY + +
Sbjct: 184 QQVREDIIQQLGLRDASIHIASFNRPNLYYEV-----RAKTSKSYQQLYQYIKGKKGSGI 238
Query: 614 FYVVSLEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y +S + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGI
Sbjct: 239 VYCISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGI 298
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
NKPDVRFV+H+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 299 NKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ-- 356
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
N R + L +++ Y E +CRR L +FGE F + +C C
Sbjct: 357 ---------NEQQKAR------QQLRQVLDYAEG-TECRRSSVLGYFGESF-AGNCG-NC 398
Query: 783 DNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
DNC + +D T A+K + V TGQ+F HI+ V RG + + +++H LS +
Sbjct: 399 DNCRNGNN--SEDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTY 456
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK E R+ R LV ++ L+E D + +LK+NQ + ++ +++V +
Sbjct: 457 GIGKDKTIGEWKRLSRSLVQQNLLIE---TEDNF----RILKLNQH-SWEVMRKQRSVFI 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P N G +L +D P+ ++++ L+ LR LR
Sbjct: 509 AVPQKAN-------------GPILG-------DDNPNTMESDL-------LFDRLRQLRK 541
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+ +GV Y IF +++L+ +++ PR+ E+ +I+G+ ++KV +YG
Sbjct: 542 KIAD--SQGVPPYVIFHDSSLRLMAQSKPRSLEQFRQISGVVQSKVQQYG 589
>gi|425466065|ref|ZP_18845368.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
gi|389831578|emb|CCI25550.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
Length = 703
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 360/645 (55%), Gaps = 75/645 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + +E RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRE--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSY-------GHFFLLK 612
V+ED++Q LGL + I SFNRPNL+ + + K ++ Q Y G + +
Sbjct: 184 QQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKGAGIVYCIS 243
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 244 RKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 304 RFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ------- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N R + L +++ Y E +CRR L +FGE F + +C CDNC
Sbjct: 357 ----NEQQKAR------QQLRQVLDYAEG-TECRRSRVLGYFGESF-AGNC-GNCDNCRN 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +D T A+K + V TGQ+F HI+ V RG + + +++H LS +G GK
Sbjct: 404 GTN--NQDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+ R LV ++ L+E + D +LK+NQ + ++ +++V + P
Sbjct: 462 KTVEEWKRLSRSLVQQNILVE--TEDDF-----RILKLNQH-SWEVMRKQRSVFIAVPQK 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
NS + +D P+ ++++ L+ LR LR +
Sbjct: 514 ANSQIVG--------------------DDNPNMVESDL-------LFERLRQLRKKIAD- 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+GV Y IF +++L+ +++ PR + +I+G+ +KV +YG
Sbjct: 546 -SQGVPPYVIFHDSSLRLMAQSKPRNLGQFRQISGVVHSKVQQYG 589
>gi|344302418|gb|EGW32692.1| hypothetical protein SPAPADRAFT_49652 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1278
Score = 370 bits (950), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 206/506 (40%), Positives = 296/506 (58%), Gaps = 39/506 (7%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLV 443
VF +SFR NQ E + A++ DVFVLMPTGGGKSL YQLPAL+ G T+VISPL+
Sbjct: 534 VFKLNSFRSNQLEAVIASLLRKDVFVLMPTGGGKSLCYQLPALVKGGLTKGTTVVISPLI 593
Query: 444 SLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
SL+QDQ+ HL + N+ ++ E++ + ++Y++PE V KS +
Sbjct: 594 SLMQDQVHHLEKLNVNVRMINSKGTADEKRHTMHLFREGLLD--IVYLSPEMVIKSAMFQ 651
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
+ +E L LAR+VIDEAHC+S WGHDFRPDY+G+G+ K KFPN PV+ALTATA V
Sbjct: 652 KVIEKLYNEGQLARVVIDEAHCLSSWGHDFRPDYKGMGLFKTKFPNVPVMALTATANERV 711
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQV-------------GLSYGHFF 609
+ DV+ L L N + F+QSFNR NL+ + + K A L V G+ Y H
Sbjct: 712 RADVITHLNLNNPVFFKQSFNRTNLFYEVQWKNANHLDVIKDYIFRKFKNKTGIIYCHSK 771
Query: 610 LLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L + G +A+YH + R VQ QW ++++ +ICAT+AFGMGI+KPDVR
Sbjct: 772 QSCEQTSQRLNQLGLHSAYYHAGMSSEDRIEVQTQWQENKVYVICATIAFGMGIDKPDVR 831
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FVIH +P+S+EGY+QE GRAGRDG+ S C+++++ D ++ MI + ++S
Sbjct: 832 FVIHLFIPRSLEGYYQETGRAGRDGKPSECLMFFNTRDAHHLRSMI---IRDKS-----L 883
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC--S 786
N+ + E++ L ++V YCEN +DCRR L +F E FD C + CDNC S
Sbjct: 884 NKMS-------RESHMVKLKQVVQYCENVIDCRRKQVLHYFNETFDPKLCHQQCDNCRNS 936
Query: 787 KIKSFIEKDVTDTAKKLVELVK-LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
+ EKD T A ++ LV+ G + H +V++GS + + H+ HG G
Sbjct: 937 GSTTSFEKDFTTNAADIIRLVQSFQGFDVTRLHCEDVYKGSRSMKITSVGHDQNPYHGKG 996
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVK 871
+ L K+E R+ +L+ E L E ++
Sbjct: 997 ESLDKTEIDRLFFYLLSEKCLDEYLR 1022
>gi|389601408|ref|XP_001565398.2| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|322505030|emb|CAM42308.2| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 2031
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/503 (41%), Positives = 290/503 (57%), Gaps = 72/503 (14%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-P 433
FPW+ +L ++VFG H +R Q EI+NA M G DVFVL+PTGGGKSL YQLPAL+ P
Sbjct: 520 FPWSTELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTGGGKSLCYQLPALMPNP 579
Query: 434 G-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
+T+V+SPL+SLIQDQ+ L+ +IPA L+G ++ + +E S + + L+YVT
Sbjct: 580 AQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLFQEWASGHVVHTLVYVT 639
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE +SD + L+ L + LL R VIDEAHCVSQWGHDFRPDY+ L +LK++FP TP+
Sbjct: 640 PEYFGRSDHFVGTLQGLTDKGLLCRFVIDEAHCVSQWGHDFRPDYRKLSVLKRQFPRTPI 699
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLS-------- 604
ALTATAT V++DV++ L L N IIF+ SFNR NL + V + V +
Sbjct: 700 TALTATATDVVQQDVIKTLALRNAIIFKGSFNRANLKYSVQHVRGKQVVSVVEDLILHRF 759
Query: 605 ----YGHFFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
G + L +E + G KA++YH + A + Q++W++DE+ +ICAT
Sbjct: 760 SPSWCGIVYCLSRKDCEEMAAALVRRGIKASYYHS--EAASKNERQERWTRDELQVICAT 817
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGINKPDVR+V+H ++PKSIEGY+QE GRAGRDG S CVL + +D R + +I
Sbjct: 818 IAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSECVLLSTTTDRQRQERLI- 876
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ + + +L RM++Y NDVDCRR QL HFGE+ D
Sbjct: 877 -------------------HGSKDWRASLTSLHRMLAYTLNDVDCRRRQQLHHFGEQVDV 917
Query: 776 AHC--------------------------KKTCDNC-SKIK---SFIEKDVTDTAKKLVE 805
C + CDNC SK+ + E +V++ L
Sbjct: 918 HFCLTQRAAAGGGAVPALPPTSVASASAVTQLCDNCASKLAEGWTVKEVNVSNILLDLYA 977
Query: 806 LVKLTGQQFSSSHILEVFRGSLN 828
+V G +S ++ V+RGS++
Sbjct: 978 IVLRLG-AMTSKQLIGVYRGSVS 999
>gi|224123710|ref|XP_002330189.1| predicted protein [Populus trichocarpa]
gi|222871645|gb|EEF08776.1| predicted protein [Populus trichocarpa]
Length = 588
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/428 (46%), Positives = 260/428 (60%), Gaps = 37/428 (8%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
E N +FGN +FRP Q + AT++ D FVLMPTGGGKSL YQLPA + PG+T+VIS
Sbjct: 174 FELANVVIFGNKTFRPLQHQACKATVAKQDCFVLMPTGGGKSLCYQLPATLKPGVTVVIS 233
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L+ IPATFL+ + IL+EL D KLLYVTPE++A +
Sbjct: 234 PLLSLIQDQIITLNLKFGIPATFLNSQQTSAQAAAILQELRHDKPSCKLLYVTPERIAGN 293
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L L+ L+ + LA V+DEAHCVSQWGHDFRPDY+ LG LKQ FP PV+ALTATA
Sbjct: 294 PAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFRPDYKRLGCLKQNFPVVPVMALTATA 353
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERL-QVGL--------SYGHFF 609
T SV+ED+++ L + ++ SF+RPNL + K E L Q+G G +
Sbjct: 354 THSVREDILKTLRIPGALVLETSFDRPNLKYEVIGKTKESLKQLGDLLRDRFKNQCGIVY 413
Query: 610 LLKEFYVVSL------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L + V + +C KA +YH + QR VQ++W E++I+CAT+AFGMGI+
Sbjct: 414 CLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQRVDVQRKWHTGEVHIVCATIAFGMGID 473
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA-EQS 722
KPDVRFVIH++L KSIE Y+QE GRAGRD ++C+ Y DF RV M+ G ++
Sbjct: 474 KPDVRFVIHNTLSKSIESYYQESGRAGRDSHPATCIALYQKKDFSRVVCMLRSGQGYKRE 533
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK--- 779
F P + +M SYCE V+CRR + L HFGE FD CK
Sbjct: 534 SFKPAMAQAQ----------------KMKSYCELKVECRRQVLLEHFGESFDQKACKFGS 577
Query: 780 KTCDNCSK 787
CDNC K
Sbjct: 578 NPCDNCLK 585
>gi|261330758|emb|CBH13743.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei gambiense DAL972]
Length = 1548
Score = 369 bits (948), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 207/492 (42%), Positives = 288/492 (58%), Gaps = 49/492 (9%)
Query: 362 IEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGK 421
I ++ ++S +PW+++L VFG H+FR Q EI+NA M+ DVFVL+PTGGGK
Sbjct: 432 IAKASTGEFSGEHYPWSEELRRTMVDVFGLHNFRFLQLEIMNACMANRDVFVLLPTGGGK 491
Query: 422 SLTYQLPALIC-PG-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL 479
SL YQLPAL+ P +T+VISPLVSLIQDQ+ L ++PA L+G ++++ E
Sbjct: 492 SLCYQLPALLPNPAKVTIVISPLVSLIQDQVYALRAYDLPAMALTGQTLDAPRRDLFNEW 551
Query: 480 NSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQG 539
+S L+YVTPE +SD ++ L+SL R LL R V+DEAHCVSQWGHDFRPDY+
Sbjct: 552 SSGRIVCTLVYVTPEYFGRSDHFVQSLKSLENRGLLNRFVVDEAHCVSQWGHDFRPDYRK 611
Query: 540 LGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK----- 594
L LK FP P+ ALTATAT +V+ D++Q LGL N + F+ SFNR NL ++
Sbjct: 612 LAALKHHFPQVPISALTATATDTVQRDIIQTLGLHNAVSFKGSFNRHNLKYSVQRITSKA 671
Query: 595 ---VAERLQVGL---SYGHFFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQ 643
VAE ++ S G + + +E V + G +A++YH D +++ Q+Q
Sbjct: 672 GSTVAEIIKKNFPPRSCGIVYCISKKDCEEMAAVLRKEGIRASYYHA--DASEKNEKQEQ 729
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
W++DE+ ++CATVAFGMGINKPDVRFVIH ++PKSIEGY+QE GRAGRDG S C L ++
Sbjct: 730 WTRDELQVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLSSKCFLLFA 789
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
D R + MI Q T+ +L MV Y NDV CRR+
Sbjct: 790 AGDRQRHEQMICGSKDSQ--------------------TSMLSLCHMVGYTLNDVHCRRM 829
Query: 764 LQLVHFGEKFDSAHC------KKTCDNC-SKIKSFIEKDVTDTAKKLVELVKLT--GQQF 814
QL +FGE C + CDNC S+ + E ++ D L++ +T
Sbjct: 830 QQLSYFGEHVSDHFCLTAPGDVEICDNCASRKEEGWEPEMIDVTSILIDFFNITIYIGSL 889
Query: 815 SSSHILEVFRGS 826
+ ++ V+RG+
Sbjct: 890 TQKQLIAVYRGT 901
>gi|449454038|ref|XP_004144763.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 267/433 (61%), Gaps = 42/433 (9%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
E N +FGN +FRP Q E A S D F+LMPTGGGKSL YQLPA + PG+T+VIS
Sbjct: 188 FELANVVIFGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVIS 247
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L+ IP+TFL+ ++ +L+EL D KLLYVTPE++A +
Sbjct: 248 PLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLLYVTPERIA-T 306
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L L ++ ++ LA V+DEAHCVSQWGHDFRPDY+ LG LKQ FP+ PV+ALTATA
Sbjct: 307 QSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATA 366
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMD--CEKVAERLQVGLSYGHFFLLKEFYVV 617
T SV+EDV++AL + + +I +SF+RPNL + C+ +Q+G F + V
Sbjct: 367 THSVREDVLKALRIPHALILERSFDRPNLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVY 426
Query: 618 SL---ECGH-----------KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L EC KAA+YH + QR VQK+W +I I+CAT+AFGMGI+
Sbjct: 427 CLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLVQKKWHVGDIQIVCATIAFGMGID 486
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI--SQGVAEQ 721
KPDVRFVIH+++ KSIE Y+QE GRAGRDG +SC++ Y DF RV M+ +QG +
Sbjct: 487 KPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSRVVCMLRNAQGFKSE 546
Query: 722 SPFTPGHNRFNVANS-GRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK- 779
S F ++ S G+ +M +CE +CRR + L HFGE FD CK
Sbjct: 547 S--------FKMSMSQGK----------KMQQFCELKDECRRQMLLQHFGESFDRKACKY 588
Query: 780 --KTCDNCSKIKS 790
CDNC K S
Sbjct: 589 GSNPCDNCLKKSS 601
>gi|425470694|ref|ZP_18849554.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
gi|389883511|emb|CCI36062.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
Length = 701
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 362/645 (56%), Gaps = 75/645 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + +E RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRE--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSY-------GHFFLLK 612
V+ED++Q LGL + I SFNRPNL+ + + K ++ Q Y G + +
Sbjct: 184 QQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKGSGIVYCIS 243
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 244 RKTVDQVAEQLQKDGINALPYHAGMEDRERSQNQTRFIRDDVQIMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 304 RFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ------- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N R + L +++ Y E +CRR L +FGE F + +C CDNC
Sbjct: 357 ----NEQQKAR------QQLRQVLDYAEG-TECRRSSVLGYFGESF-AGNC-GNCDNCRN 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +D T A+K + V TGQ+F HI+ V RG + + +++H LS +G GK
Sbjct: 404 GNN--SEDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+ R LV ++ L+E D + +LK+NQ + ++ +++V + P
Sbjct: 462 KTLGEWKRLSRSLVQQNLLVE---TEDNF----RILKLNQH-SWEVMRKQRSVFIAVPQK 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
N G +L +D P+ ++++ L+ LR LR +
Sbjct: 514 AN-------------GPILG-------DDNPNMVESDL-------LFERLRQLRKKIAD- 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+GV Y IF +++L+ +++ PR+ + +I+G+ +KV +YG
Sbjct: 546 -SQGVPPYVIFHDSSLRLMAQSKPRSLGQFRQISGVVHSKVQQYG 589
>gi|358054510|dbj|GAA99436.1| hypothetical protein E5Q_06135 [Mixia osmundae IAM 14324]
Length = 1229
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 304/519 (58%), Gaps = 41/519 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI--- 431
FPW++ + K F SFRPNQ + INAT++ DVF+LMPTGGGKSL YQLPA++
Sbjct: 477 FPWSRDVLKVLNKHFRLSSFRPNQLKAINATLAADDVFILMPTGGGKSLCYQLPAVVQSG 536
Query: 432 -CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS--DYCKYKL 488
G+++VISPL+SLI DQ L+ ++ A + +++ +++ ++ EL + D + L
Sbjct: 537 KTRGVSIVISPLLSLIHDQCQALMDKDVIALAFNSDLKKSDRDFVINELRTADDDTRPCL 596
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
+YVTPE +AKS + L +L+ R+ LAR VIDEAHC+S WG DFRPDY+ LG +K+++P
Sbjct: 597 IYVTPEMIAKSTLFKDVLRNLHRRQRLARFVIDEAHCISSWGFDFRPDYKELGSIKREYP 656
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-----------WMDCEKVAE 597
P++ALTATA VK+DV+ +LG+ +C++ QSFNRPNL D + +
Sbjct: 657 GVPIMALTATANERVKQDVITSLGINDCLVLSQSFNRPNLRYEVRPKGKLIIKDISDLIK 716
Query: 598 RLQVGLSYGHFFLLK---EFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINII 652
R GL + L K E +L+ H KA YH + R +Q W + +I+++
Sbjct: 717 RDFAGLCGIIYCLSKKQCEDIAEALKTQHGVKAHHYHAGMAKDDRIRIQADWQRGKIHVV 776
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
CAT+AFGMGI+K +VRFV+H ++ S+E Y+QE GRAGRDG S C+LY++++D +
Sbjct: 777 CATIAFGMGIDKANVRFVLHFTISGSLEAYYQETGRAGRDGGDSVCILYFNFNDTRLLYR 836
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I G E S R +V + MV Y N +DCRR L +FGE
Sbjct: 837 LIDTG--EGSHEQKQRQRAHVQD--------------MVKYAFNTIDCRRTQVLQYFGET 880
Query: 773 FDSAHCKKTCDNCSKIKSFIE-KDVTDTAKKLVELVKLTGQQ--FSSSHILEVFRGSLNQ 829
F C TCDNC K + E ++T AK ++ LV+ Q + H ++FRGS +
Sbjct: 881 FAREQCHATCDNCRKSGTGQELVNMTSYAKLIITLVREIQDQKGITLVHCADIFRGSKLK 940
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
V + H+ L+ GAG LA+++ R+L+ + E L E
Sbjct: 941 KVVESGHDRLAGFGAGSSLARTDIERLLQIMCNEGILGE 979
>gi|168029873|ref|XP_001767449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681345|gb|EDQ67773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 655
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 240/669 (35%), Positives = 329/669 (49%), Gaps = 94/669 (14%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS F W + +FG S+R NQ EIINA MSG DV V+M GGGKSL YQLPA
Sbjct: 62 WSG-SFEWDNRAADIRLNLFGIKSYRQNQHEIINAVMSGRDVIVIMAAGGGKSLCYQLPA 120
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
++ G LVISPL+SLIQDQ+M L I A+ L+ E++ I + L K+L
Sbjct: 121 MLRTGTALVISPLLSLIQDQVMGLTALGISASMLTSTTTKDEEKSIYKSLEKGEGDLKIL 180
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEKVAKS + +LE N L+ I IDEAHC SQWGHDFRPDY+ LGILK++FP
Sbjct: 181 YVTPEKVAKSKRFVSKLEKCNHGGRLSLIAIDEAHCCSQWGHDFRPDYKQLGILKKQFPR 240
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFF 609
P++ALTATAT V+ D+ + L + C F + NRPNL+ + + + F
Sbjct: 241 VPMIALTATATERVQTDLREMLQITRCEKFVSTVNRPNLFYEVREKKANGSAAIDDIASF 300
Query: 610 LLKEF--------YVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
+L ++ Y S EC G AA YH + P R+ V +WS +++
Sbjct: 301 ILDKYSKKESGIVYCFSRKECEQVAAELRKRGISAAHYHADMKPETRSSVHMRWSTNKLQ 360
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG + C+LY+ +D R
Sbjct: 361 VIVGTVAFGMGINKPDVRFVIHHSLSKSLETYYQESGRAGRDGLPAHCLLYFRPADLPRQ 420
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
M+ +A NL + +C++ CRR HFG
Sbjct: 421 SSMVFAEMA-----------------------GLHNLYAICRFCQSKQACRRAAFFRHFG 457
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQY 830
EK C CDNC+ K ++ DVT + LV +VK + IL Q
Sbjct: 458 EKIQK--CNGMCDNCAFTKEVVDTDVTGVSLSLVSMVKESNDVEQKLTIL--------QL 507
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
V++ R+ L K L+K + R++ L+++ L EE + + A
Sbjct: 508 VEQWRNTDAQL---AKDLSKDDVERVIVQLILDGILKEEF--------------AHTAYA 550
Query: 891 HNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLS 950
N + V L S K ++ + P +E + S
Sbjct: 551 TNAYVALGTVKLEIVKGAQSAK--------------------KKSKANTAPISEEGMTFS 590
Query: 951 AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
L S+L LR L G G+ + + + + L+ + P T EEL E+ IGK +
Sbjct: 591 G-LGSALDDLRQNLAASHG-GIFPHSVLTSQHISLLASQKPVTMEELEEV--IGKRIAEQ 646
Query: 1011 YGVRLLETI 1019
YG +L +I
Sbjct: 647 YGNEILVSI 655
>gi|72393397|ref|XP_847499.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma brucei TREU927]
gi|62359597|gb|AAX80030.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei]
gi|70803529|gb|AAZ13433.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1548
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 207/492 (42%), Positives = 288/492 (58%), Gaps = 49/492 (9%)
Query: 362 IEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGK 421
I ++ ++S +PW+++L VFG H+FR Q EI+NA M+ DVFVL+PTGGGK
Sbjct: 432 IAKASTGEFSGEHYPWSEELRRTMVDVFGLHNFRFLQLEIMNACMANRDVFVLLPTGGGK 491
Query: 422 SLTYQLPALIC-PG-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL 479
SL YQLPAL+ P +T+VISPLVSLIQDQ+ L ++PA L+G ++++ E
Sbjct: 492 SLCYQLPALLPNPAKVTIVISPLVSLIQDQVYALRAYDLPAMALTGQTLDAPRRDLFNEW 551
Query: 480 NSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQG 539
+S L+YVTPE +SD ++ L+SL R LL R V+DEAHCVSQWGHDFRPDY+
Sbjct: 552 SSGRIVCTLVYVTPEYFGRSDHFVQSLKSLENRGLLNRFVVDEAHCVSQWGHDFRPDYRK 611
Query: 540 LGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK----- 594
L LK FP P+ ALTATAT +V+ D++Q LGL N + F+ SFNR NL ++
Sbjct: 612 LAALKHHFPQVPISALTATATDTVQRDIIQTLGLHNAVSFKGSFNRHNLKYSVQRITSKA 671
Query: 595 ---VAERLQVGL---SYGHFFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQ 643
VAE ++ S G + + +E V + G +A++YH D +++ Q+Q
Sbjct: 672 GSTVAEIIKKNFPPRSCGIVYCISKKDCEEMAAVLRKEGIRASYYHA--DASEKNEKQEQ 729
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
W++DE+ ++CATVAFGMGINKPDVRFVIH ++PKSIEGY+QE GRAGRDG S C L ++
Sbjct: 730 WTRDELQVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLSSKCFLLFA 789
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
D R + MI Q T+ +L MV Y NDV CRR+
Sbjct: 790 AGDRQRHEQMICGSKDSQ--------------------TSMLSLCHMVGYTLNDVHCRRM 829
Query: 764 LQLVHFGEKFDSAHC------KKTCDNC-SKIKSFIEKDVTDTAKKLVELVKLT--GQQF 814
QL +FGE C + CDNC S+ + E ++ D L++ +T
Sbjct: 830 QQLSYFGEHVSDHFCLTAPGDVEICDNCASRKEEGWEPEMIDVTSILIDFFNITIYIGSL 889
Query: 815 SSSHILEVFRGS 826
+ ++ V+RG+
Sbjct: 890 TQKQLIAVYRGT 901
>gi|118579582|ref|YP_900832.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
gi|118502292|gb|ABK98774.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
Length = 714
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 226/654 (34%), Positives = 351/654 (53%), Gaps = 80/654 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L+ K VFG SFRP QRE+I ++G DVF++MPTGGGKSL YQ+PAL G+ +V+S
Sbjct: 5 LDHTLKSVFGYGSFRPPQREVIQRVVAGEDVFLVMPTGGGKSLCYQIPALHREGVAIVVS 64
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL+SL++DQ+ L+ A + A + ++ E + + R+L + LLYV PE++ D
Sbjct: 65 PLISLMKDQVDGLVDAGVRAACYNSSLTAEESRAVSRQLAQG--ELDLLYVAPERLLLPD 122
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L R L L LA IDEAHC+SQWGHDFRPDY LG L++ FP+ P++A+TATA
Sbjct: 123 FLER-LGGLK----LALFAIDEAHCISQWGHDFRPDYVKLGRLRELFPSVPIVAMTATAD 177
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLK 612
+ D+++ LG+ +F F+RPN+ + + LS+ G + L
Sbjct: 178 PETRRDIIRQLGIERATLFVAGFDRPNITYAVIPKQKPVNQLLSFLKGRGDESGIVYALS 237
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G AA YH + +R+ VQ + +D++ ++ ATVAFGMGI+KP+V
Sbjct: 238 RKRVEQVTERLQQAGFDAAAYHAGLPDRERSRVQDAFRRDDLRVVVATVAFGMGIDKPNV 297
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ LPKS+E Y+QE GRAGRDG S ++ + D + + +I
Sbjct: 298 RFVVHYDLPKSVESYYQETGRAGRDGLPSQALMLFGMGDVMTARSLIE------------ 345
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N N+ RV + L MVSY E + CRR L +FGE+ D C CD C+
Sbjct: 346 ----NSDNAERV-RIELQKLNAMVSYAEA-LTCRRRALLAYFGEQRDD-DC-GNCDICND 397
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ D T+ A+K + V G++F S H+++V RG+ Q + + H+ LS +G G
Sbjct: 398 PPARF--DATEAAQKALSCVYRVGERFGSRHVIDVLRGARGQRILELGHDRLSTYGIGAA 455
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
L+ ++ I+R L+ +L ++ + +G+++ S A ++ G V+L P
Sbjct: 456 LSTAQWDNIMRQLIHLGYLGQDFSR---FGALALT-----SAARPVLTGETRVILGEPRD 507
Query: 908 INST--KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
+ T KLS+ + + + G P L+ +L+ LR L
Sbjct: 508 LARTEEKLSR------RATAVDGAHGP--------------------LFKALKALRKELA 541
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+A GV + +F +ATL +++ +P E +LL ++G+G K+ +YG R LE I
Sbjct: 542 DDA--GVPPFVVFSDATLLEMARSMPSDEGQLLLVSGVGTQKLRRYGARFLELI 593
>gi|449517902|ref|XP_004165983.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 369 bits (947), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 266/433 (61%), Gaps = 42/433 (9%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
E N +FGN +FRP Q E A S D F+LMPTGGGKSL YQLPA + PG+T+VIS
Sbjct: 188 FELANVVIFGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVIS 247
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L+ IP+TFL+ ++ +L+EL D KLLYVTPE++A +
Sbjct: 248 PLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLLYVTPERIA-T 306
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L L ++ ++ LA V+DEAHCVSQWGHDFRPDY+ LG LKQ FP+ PV+ALTATA
Sbjct: 307 QSFLEILRFMHMKKQLASFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATA 366
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMD--CEKVAERLQVGLSYGHFFLLKEFYVV 617
T SV+EDV++AL + + +I +SF+RPNL + C+ +Q+G F + V
Sbjct: 367 THSVREDVLKALRIPHALILERSFDRPNLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVY 426
Query: 618 SL---ECGH-----------KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L EC KAA+YH + QR VQK+W +I I+CAT+AFGMGI+
Sbjct: 427 CLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLVQKKWHVGDIQIVCATIAFGMGID 486
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI--SQGVAEQ 721
KPDVRFVIH+++ KSIE Y+QE GRAGRDG +SC++ Y DF RV M+ +QG +
Sbjct: 487 KPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSRVVCMLRNAQGFKSE 546
Query: 722 SPFTPGHNRFNVANS-GRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK- 779
S F ++ S G+ +M +CE CRR + L HFGE FD CK
Sbjct: 547 S--------FKMSMSQGK----------KMQQFCELKDQCRRQMLLQHFGESFDRKACKY 588
Query: 780 --KTCDNCSKIKS 790
CDNC K S
Sbjct: 589 GSNPCDNCLKKSS 601
>gi|223940604|ref|ZP_03632448.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
gi|223890722|gb|EEF57239.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
Length = 728
Score = 369 bits (946), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 251/700 (35%), Positives = 365/700 (52%), Gaps = 97/700 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG SFRP Q EII T++G DVF L+PTGGGKSL +QLPAL+ PG+T+VISPL++L
Sbjct: 17 KQYFGFSSFRPLQEEIILDTLAGKDVFALLPTGGGKSLCFQLPALVRPGLTVVISPLIAL 76
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + PATFL+ ++E E LR L+ +++LLYV PE++ S L
Sbjct: 77 MKDQVDALTASGAPATFLNSSLEAGESTPRLRGLHKG--EFRLLYVAPERLMLSG-FLED 133
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N L A IDEAHCVS+WGHDFRP+Y+ + L++ FP P +ALTATAT V+E
Sbjct: 134 LRRWNV-NLFA---IDEAHCVSEWGHDFRPEYRAISKLRELFPEVPFMALTATATERVRE 189
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKV------------AERLQVGLSYGHFFLLKE 613
D+++AL L IF SFNRPNL A + G+ Y H E
Sbjct: 190 DIIRALSLREPQIFVASFNRPNLTYRVHAKSGAYEQTLSFIRARPRESGIVYCHSRKTAE 249
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L E G A YH + +R+ Q+ + +DE+ ++CAT+AFGMGINKP+VRFVIH
Sbjct: 250 SVAQKLNEDGVSARPYHAGLPGEERSRNQELFLRDEVRVVCATIAFGMGINKPNVRFVIH 309
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LPK++EGY+QE GRAGRDG S C+L +S D ++ I++ T H +
Sbjct: 310 YDLPKNVEGYYQETGRAGRDGLPSECLLLFSPGDVVKQTGFINEK-------TDPHEQ-- 360
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIKSF 791
+ E L +MV Y E CRR L +FGE+F A+C + CDNC S +F
Sbjct: 361 --------QLAREQLQQMVHYAEI-ASCRRASLLDYFGEEFPVANC-EACDNCLSPRDTF 410
Query: 792 IEKDVTDTAKKLVELV----KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
D T A+K + V + +G +HI EV G+ + +++ H LS +G G+
Sbjct: 411 ---DGTLVAQKFLSCVFRVREKSGFGVGLNHITEVLTGADTEKIRRWGHTQLSTYGIGRD 467
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ ++E I R LV FL + K V Q A GR +F
Sbjct: 468 VGRAEWGAIGRELVRLGFLEQTKDK----------FPVIQITAE----GR-----KFLKQ 508
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ +LS+ PAK + +G+++ L+ LR LR L E
Sbjct: 509 RGTVQLSRPITAPAKQAHQAGEIA-----------------CDESLFERLRALRKRLANE 551
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFY 1027
V +Y IF + L+ +++ P++E+E I+G+G+ K+ ++G E+ I
Sbjct: 552 --RDVPSYIIFSDVALRQMARNYPQSEKEFARISGVGEKKLREFG----ESFLGEIAAHL 605
Query: 1028 KTDKNGSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKST 1067
T+ ++DS + AP A + +D T+ T
Sbjct: 606 ATNARQIFADDSFTA--------TAPTAARSRVNDTTRET 637
>gi|166362830|ref|YP_001655103.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
gi|166085203|dbj|BAF99910.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
Length = 703
Score = 369 bits (946), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 361/645 (55%), Gaps = 75/645 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + +E RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRE--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSY-------GHFFLLK 612
V+ED++Q LGL + I SFNRPNL+ + + K ++ Q Y G + +
Sbjct: 184 QQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKGAGIVYCIS 243
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 244 RKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 304 RFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ------- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N R + L +++ Y E +CRR L +FGE F + +C CDNC
Sbjct: 357 ----NEQQKAR------QQLRQVLDYAEG-TECRRSRVLGYFGESF-AGNC-GNCDNCRN 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +D T A+K + V TGQ+F HI+ V RG + + +++H LS +G GK
Sbjct: 404 GTN--NQDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+ R LV ++ L+E + D +LK+NQ + ++ +++V + P
Sbjct: 462 KTVEEWKRLSRSLVQQNILVE--TEDDF-----RILKLNQH-SWEVMRKQRSVFIAVPQK 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
N G ++ +D P+ ++++ L+ LR LR +
Sbjct: 514 AN-------------GQIVG-------DDNPNMVESDL-------LFERLRQLRKKIAD- 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+GV Y IF +++L+ +++ PR + +I+G+ +KV +YG
Sbjct: 546 -SQGVPPYVIFHDSSLRLMAQSKPRNLGQFRQISGVVHSKVQQYG 589
>gi|134109345|ref|XP_776787.1| hypothetical protein CNBC2780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259467|gb|EAL22140.1| hypothetical protein CNBC2780 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1217
Score = 368 bits (945), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 214/539 (39%), Positives = 301/539 (55%), Gaps = 51/539 (9%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP--- 433
W+K++ ++VF +FR +Q+E I+ TM+G DVFVLMPTGGGKSLTYQLPA IC
Sbjct: 374 WSKEVNQKLRQVFKLPNFRKHQKEAIDETMAGRDVFVLMPTGGGKSLTYQLPA-ICSSGK 432
Query: 434 --GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYV 491
G+T V+SPL+SLI DQ HL+ IPA +G++ ++ EL+ K++YV
Sbjct: 433 TRGVTFVVSPLISLINDQTRHLISRGIPAIAYTGDLTQRDKNLAHEELSKREPITKVVYV 492
Query: 492 TPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 551
TPE ++ + L L R+ LAR VIDEAHCVSQWGHDFR DY LG L++ +P P
Sbjct: 493 TPEMMSMGGHIKSILRGLLQRKQLARFVIDEAHCVSQWGHDFRADYLRLGELRRDYPGVP 552
Query: 552 VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSYGHFFL 610
++ALTATA V+ED++++L + C+ RQSFNRPNL + K + +Q +++ H
Sbjct: 553 IMALTATAQNKVQEDIIRSLRIEGCVCLRQSFNRPNLHYEVRPKTSSVIQEIVAFVHTQE 612
Query: 611 LKEFYVVSLEC---------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
+ +V G +A YH + R +Q+ W + I+ AT
Sbjct: 613 ARASGIVYCNSRDNCENLAKKLREDHGLRAYHYHAGMTKENRRKMQEGWQDHKFEIMVAT 672
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGI+KPDVR+VIHH LP+S+EGY+QE GRAGRDG S+C+LYYS+ D ++ I
Sbjct: 673 IAFGMGIDKPDVRYVIHHHLPRSLEGYYQETGRAGRDGNPSTCILYYSFKDGKKILGQID 732
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
Q + T A+ VL YC N VDCRR L F E FD+
Sbjct: 733 Q----EKDLTRDQKERQKASMQEVLR-----------YCNNKVDCRRSQVLAFFNETFDA 777
Query: 776 AHCKKTCDNC--SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHIL-----EVFRGSLN 828
A+C + CD C F +DVTD A ++++V Q FS++ I E FRG
Sbjct: 778 ANCNQGCDVCLGRDRNVFRTEDVTDDAVTVIKMV----QAFSNTKITILNAAECFRGFKG 833
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQ 887
K+ GAG+ ++E R+++ LVIE L E +S G ++ L+V +
Sbjct: 834 NSGKQLNQN--PYFGAGQSWDRNEGERLIQTLVIEGALEEYCVESKA-GWTNAYLRVGK 889
>gi|39996003|ref|NP_951954.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens PCA]
gi|39982768|gb|AAR34227.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens PCA]
Length = 603
Score = 368 bits (945), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 232/651 (35%), Positives = 345/651 (52%), Gaps = 76/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFRP Q EI++ G D FVLMPTGGGKSL YQ+P+L+ PG+ +VISPL+SL
Sbjct: 10 RTVFGYRSFRPFQEEIVDRVARGGDTFVLMPTGGGKSLCYQIPSLVRPGVGIVISPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + + A + + E + +L L+ + LLYV PE++ +D L +
Sbjct: 70 MKDQVDALRENGVAAACYNSTLGERESRRVLARLHGG--ELDLLYVAPERL-MTDAFLER 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + +A IDEAHCVSQWGHDFRP+Y LG L+ FP P++ALTATA A +
Sbjct: 127 LREIP----IALFAIDEAHCVSQWGHDFRPEYVELGRLRGLFPTVPMIALTATADAQTRG 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFFLLKEFYVV 617
D+V LGL + +F F+RPN+ ++ +K +L+ L+ G + L V
Sbjct: 183 DIVTRLGLRDAEMFVTGFDRPNIRYSVLEKQKPFRQLEEFLATRPREAGIVYCLSRKRVE 242
Query: 618 SLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+ G +A YH + A+R+ VQ+ + +D+I ++ ATVAFGMGI+KP+VRFV+H
Sbjct: 243 EVAEKLRAAGVEAGAYHAGLADAERSRVQEAFLRDDIRVVVATVAFGMGIDKPNVRFVVH 302
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI-SQGVAEQSPFTPGHNRF 731
+ LPK+IE Y+QE GRAGRDG + +L + Y D + +I S G EQ
Sbjct: 303 YDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIPVSRSLIESGGNPEQ---------- 352
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ L MV + E V CRR L +FGE+ + + C NC +
Sbjct: 353 --------VRIELHKLNAMVGFAEALV-CRRRALLGYFGERLE-----EPCGNCDLCLAP 398
Query: 792 IEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
E D T+ A+K + V GQ+F H+++V RGS ++ + H+ LS +G G LA
Sbjct: 399 PETFDATEEARKALSCVYRVGQRFGVGHVIDVLRGSRSERILALGHDRLSTYGIGASLAA 458
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I+R L+ +L +++ SVLK+ + A L+ G +++VL P
Sbjct: 459 EAWGSIIRQLIHRGYLEQDLAN-------YSVLKLTPA-ARPLLRGEESLVLAKP----- 505
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+L + +P + P +P +L+ LR LR L + +
Sbjct: 506 -RLRMA--------------APKKEKAPRRPGAATPAERDEELFQELRALRKRLADD--Q 548
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
V Y IF +ATL ++ P T EELL +NG+G+ K+ +YG LE I S
Sbjct: 549 QVPPYIIFSDATLAEMASLRPTTPEELLRVNGVGERKLGRYGAPFLEAIRS 599
>gi|298675436|ref|YP_003727186.1| ATP-dependent DNA helicase RecQ [Methanohalobium evestigatum Z-7303]
gi|298288424|gb|ADI74390.1| ATP-dependent DNA helicase RecQ [Methanohalobium evestigatum Z-7303]
Length = 596
Score = 368 bits (945), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 233/646 (36%), Positives = 354/646 (54%), Gaps = 80/646 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
K FG FR +Q++II + D FV+MPTGGGKSL YQLPAL+ G+T+V+SPL+SL+
Sbjct: 7 KYFGYEEFRSHQKDIITDILDKKDTFVVMPTGGGKSLCYQLPALLMEGVTIVVSPLISLM 66
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L I A L+ + + E +I +L Y + +LY+TPE++ S L L
Sbjct: 67 KDQVDELRSNGISAACLNSTLGYQESNQICNDLL--YNRIDVLYITPERLTMSKTL-DFL 123
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
ES+N + IDEAHC+S+WG DFRP+Y L +LK+KFP+ P++ALTATAT V+ D
Sbjct: 124 ESVN----INLFAIDEAHCISEWGQDFRPEYLRLNMLKKKFPDIPLIALTATATPRVQND 179
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMDC-------EKVAERLQVGLSYGHFFL------LKE 613
V+ L L +C + SFNR NL+ + +++ L+ Y +++
Sbjct: 180 VISLLELEDCRRYISSFNRDNLYYEVRHKKDAYKQMVRYLKTHRKYNGIIYCQSRRAVED 239
Query: 614 FYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
Y + G + YH + R Q+ + +D++ II AT+AFGMGINKP+VRFVIH+
Sbjct: 240 LYNKLKKEGFRVLPYHAGLPAKIREENQESFIRDDVQIIVATIAFGMGINKPNVRFVIHY 299
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPK++E Y+Q+ GR GRDG C+L++SY D ++++ I+Q + +S ++ N+
Sbjct: 300 DLPKNLENYYQQTGRGGRDGLDCDCILFFSYGDRYKIEYFINQK-SRKSERDIALSKLNM 358
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
M+ YCE++V CRR L L +FGE FD +C K CD C + K
Sbjct: 359 ----------------MIDYCESNV-CRRKLLLNYFGEDFDVQNCGK-CDVCLEPKEMT- 399
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D T TAK + V Q++ +H+++V GS + + +H+ L +GAG + K++
Sbjct: 400 -DGTATAKTFLSCVDELNQKYGLNHVVDVLTGSKTKKITDKQHDLLESYGAGYNYKKNQW 458
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
I + L+ + +L EVK VLK+NQ K+ N++ G++NV L TKL
Sbjct: 459 LDIGKELLHKGYL--EVKGK------YPVLKLNQ-KSQNILSGQENVQL--------TKL 501
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
S+ T K S N+T +Q L+ LR LR L E
Sbjct: 502 SEYPST--------SKQDNSANETDNQ------------LFEKLRRLRKKLAD--SENKA 539
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
Y IF + +L+ ++ P+T +E L+I+G+G+ K+ KYG L I
Sbjct: 540 PYIIFADTSLRQMASICPKTYDEFLKISGVGEYKLEKYGDMFLSEI 585
>gi|332707801|ref|ZP_08427828.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
gi|332353504|gb|EGJ33017.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
Length = 709
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 241/665 (36%), Positives = 366/665 (55%), Gaps = 89/665 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG+ FRP Q++II + D+ ++MPTGGGKSL YQLPAL+ PG+T+V+S
Sbjct: 7 LEHALKHFFGHDCFRPGQQQIIEEALQNQDLLIIMPTGGGKSLCYQLPALLKPGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL+SL+QDQ+ L I ATF++ + + QQ RE K KLLYV+PE++ ++
Sbjct: 67 PLISLMQDQVTSLEDNGIGATFINSTLSF--QQMRSREAAILEGKIKLLYVSPERLL-AE 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ L+ + ++ + IDEAHCVSQWGHDFRPDY+ L +L+ ++PN+ VLALTATAT
Sbjct: 124 QFIPFLDRVRSQIGIPTFAIDEAHCVSQWGHDFRPDYRQLKLLRNRYPNSSVLALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEF------ 614
V++D++Q L L + SFNRPNL+ D + + SY LLK+
Sbjct: 184 NRVQQDIIQQLELRQPKVHIASFNRPNLYYDVQPKQRQ-----SYQQ--LLKQIRSHQGS 236
Query: 615 ---YVVSLECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGM 660
Y S + AF YHG + RA Q ++ +D++ +I ATVAFGM
Sbjct: 237 GIVYCTSRRSVEEVAFRLQNDGISALPYHGGMTDKARATNQNRFIRDDVRVIVATVAFGM 296
Query: 661 GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAE 720
GINKPDVRFVIH+ LP++IE Y+QE GRAGRDG+ ++C + YS SD ++ ++I +
Sbjct: 297 GINKPDVRFVIHYDLPRNIESYYQESGRAGRDGEPATCTVLYSASDISKLHYLI-----D 351
Query: 721 QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKK 780
Q P P R + L ++V Y E DCRR + L +FGE+F +C+K
Sbjct: 352 QKP-DPKEQRIAY-----------QQLNQIVDYAEG-TDCRRRILLGYFGERF-PGNCEK 397
Query: 781 TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
CDNC K +D T A+K + V ++F +HI++V RGS ++ ++++ H LS
Sbjct: 398 -CDNCCYPKPL--EDWTIEAQKFLSCVARCRERFGMNHIIQVLRGSKSKKIEQYGHHLLS 454
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
+G GK +EA +IL ++ L+++ +D Y SVLK+N K I+ +Q
Sbjct: 455 TYGIGKD-QTAEAWKILVRSLLHQGLVDQT--TDGY----SVLKLN--KLSWEILRKQRS 505
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
V + +S V A G + P + E+ L LR L
Sbjct: 506 VY--------VPIPQSSVEKALGEI-----------NPRVAEAEI-------LLEKLRKL 539
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R L + + Y +F ++TL+ +++ P+T E +++G+ + KV++YG + + I
Sbjct: 540 RKQLADR--QSIPPYVVFADSTLKLMAQLKPKTLEHFAKLSGVTQYKVTQYGEQFISEIR 597
Query: 1021 STIKE 1025
+ +E
Sbjct: 598 AFCQE 602
>gi|432943336|ref|XP_004083165.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Oryzias latipes]
Length = 802
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/526 (37%), Positives = 301/526 (57%), Gaps = 58/526 (11%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
Q++ +FPW+ ++ + + F +FRP Q IN TM G DVF++MPTG GKSL YQL
Sbjct: 79 QRYDEAEFPWSAAVDQHLRTSFHLSAFRPLQLRAINLTMEGRDVFLVMPTGRGKSLCYQL 138
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA+ G TLV+SPLVSL++DQ++ L +PA L+ + + +L L +K
Sbjct: 139 PAVCSEGFTLVVSPLVSLMEDQLLLLRSLQVPAAALNASSGKEHTKTVLAALTDPKAPFK 198
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
L+YVTPEK+AKS +L+ +LE +LL+R+ +DE HC SQWGHDFRPDY+ LGILK++F
Sbjct: 199 LVYVTPEKIAKSKLLMSRLEKAYKAKLLSRMAVDEVHCCSQWGHDFRPDYKLLGILKRQF 258
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-------------- 593
P+ P+L LTATAT+SV +D + L + + SFNR NL+ +
Sbjct: 259 PSVPLLGLTATATSSVLQDCRKILCVPQPVTLTASFNRANLYYEVRVKDSDSDLSLSDIS 318
Query: 594 ---KVAERLQVGLSYGHFFLLKEFYVVS---LECGHKAAFYHGSIDPAQRAFVQKQWSKD 647
K + Q G+ Y F K+ VS + G +A YH ++DP ++ V ++W+ +
Sbjct: 319 SLIKNRYKEQSGIVY--VFSQKDAESVSSALQKSGIQAYPYHANMDPEDKSRVHRKWTSN 376
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
+I ++ ATVAFGMGI+KPDVRFVIHH++ KSIE Y+QE GRAGRD + + C++Y+ ++D
Sbjct: 377 KIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDDRPADCIVYFGFADI 436
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLET-NTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ V+E+ + LL+MV +C+N CRR L
Sbjct: 437 FRISTMV------------------------VMESVGQKKLLQMVDFCQNVDRCRRSLMA 472
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLT---GQQFSSSHILEVF 823
VHF E +D C + CD C + DVT A+++V++V+L ++ + ++E +
Sbjct: 473 VHFDEVWDDEDCNQMCDTCRHPAGYNTLDVTQHARQVVQIVELATSMDERLTPLKLVEAW 532
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
RG +K T L + +A ++ L+++ +L E+
Sbjct: 533 RGRGPAKRRKMIQTT--------ELPRRQAEAVIVFLLLQGYLRED 570
>gi|428210292|ref|YP_007094645.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
gi|428012213|gb|AFY90776.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
Length = 708
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 234/661 (35%), Positives = 361/661 (54%), Gaps = 78/661 (11%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
P + LEA K FG SFRP Q++I+ + D ++MPTGGGKSL +QLPAL+ PG
Sbjct: 1 MPRFQSLEAALKHYFGYDSFRPGQKQIVEQALQNRDQLIVMPTGGGKSLCFQLPALLQPG 60
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPE 494
+T+V+SPL++L+QDQ+ L I ATFL+ ++ + + RE K KLLYV PE
Sbjct: 61 LTVVVSPLIALMQDQVEALRDNGIGATFLNSSLNLHQVRS--REQAILSGKTKLLYVAPE 118
Query: 495 KVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLA 554
++ ++ L L+ + + +A IDEAHCVS+WGHDFRP+Y+ L L+Q++P P LA
Sbjct: 119 RLL-NEKFLPFLDLIREKIGIAAFAIDEAHCVSEWGHDFRPEYRQLKQLRQRYPGVPTLA 177
Query: 555 LTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-----KVAERLQV-------G 602
LTATAT V++D++Q LGL I SFNRPNL+ + + ++ LQ+ G
Sbjct: 178 LTATATDRVRQDIIQQLGLSQPSIHIASFNRPNLYYEVQPKQKQSYSQLLQIIRQSEGSG 237
Query: 603 LSYGHFFLLKEFYVVSLECGHKAAF-YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
+ Y + L+ AA YH + +RA Q ++ +D++ ++ AT+AFGMG
Sbjct: 238 IVYCLSRRKVDEIAFKLQQDKIAALPYHAGLSDTERAENQTRFIRDDVRVMVATIAFGMG 297
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
INKPDVRFVIHH LP++IEGY+QE GRAGRDG+ + C L+ Y D ++++I Q Q
Sbjct: 298 INKPDVRFVIHHDLPRNIEGYYQESGRAGRDGETARCTLFLGYGDIKTIEYLIDQKTDLQ 357
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
+ L +++ + E DCRR + L +FGE+F + C
Sbjct: 358 GQ-----------------RIARQQLRQVIDFAEG-TDCRRTIVLGYFGERF-AGQC-SG 397
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CDNC K + D T A K + V ++F +HI+++ RGS NQ V ++ H LS
Sbjct: 398 CDNCLAPKPVV--DWTIEAMKFLSCVARCKEKFGMNHIIDILRGSKNQKVLQYNHNKLST 455
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+G GK E R+L ++ L+++ +D Y SVLK+N + ++ RQ V
Sbjct: 456 YGIGKD-KTVEEWRLLGRSLLHQGLLDQT--TDGY----SVLKLNAASWE--VMRRQRTV 506
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQN-EVDLNLSAKLYSSLRML 960
AI++T P+ + P + + EV++ L+ LR L
Sbjct: 507 ---SIAIDTT--------------------PNLSAQPLEARTAEVEM-----LFQKLRSL 538
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + E + V Y IF ++TL+ ++ + P+T E +++G+ K+++YG + L I+
Sbjct: 539 RKEIADE--QSVPPYVIFADSTLKLMALQQPQTLTEFAQLSGVTSHKIAQYGKKFLIEIQ 596
Query: 1021 S 1021
+
Sbjct: 597 A 597
>gi|425441134|ref|ZP_18821420.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
gi|389718248|emb|CCH97777.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
Length = 703
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 362/645 (56%), Gaps = 75/645 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRPNQR+II A ++ D+ V+MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEKVLKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKGVTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L I ATFL+ + + +E RE K KLLYV PE++ S
Sbjct: 67 PLIALMQDQVTALADNGIGATFLNSTLNAKQVRE--RESLILQGKIKLLYVAPERLL-SP 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L ++ LA + +DEAHCVS WGHDFRP+Y+ + ++Q+FP+ P+LALTATAT
Sbjct: 124 SFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQRFPSVPILALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQVGLSY-------GHFFLLK 612
V+ED++Q LGL + I SFNRPNL+ + + K ++ Q Y G + +
Sbjct: 184 QQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKGAGIVYCIS 243
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + + G A YH ++ +R+ Q ++ +D++ I+ AT+AFGMGINKPDV
Sbjct: 244 RKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQIMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH+ LP+++EGY+QE GRAGRDG+ + C L++S++D ++++ I+Q +
Sbjct: 304 RFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQ------- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N R + L +++ Y E + +CRR L +FGE F + +C CDNC
Sbjct: 357 ----NEQQKAR------QQLRQVLDYAEGN-ECRRSSVLGYFGESF-AGNCG-NCDNCRN 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +D T A+K + V TGQ+F HI+ V RG + + +++H LS +G GK
Sbjct: 404 GTN--NQDWTIEAQKFLSCVARTGQKFGMMHIINVLRGGKGERITQYQHHLLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+ R LV ++ L+E D + +LK+NQ + ++ +++V + P
Sbjct: 462 KTVGEWKRLSRSLVQQNLLVE---TEDNF----RILKLNQH-SWEVMRKQRSVFIAVPQK 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
N G ++ +D P+ ++++ L+ LR LR +
Sbjct: 514 AN-------------GQIVG-------DDNPNTLESDL-------LFDRLRQLRKKIAD- 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+GV Y IF +++L+ +++ PR + +I+G+ +KV +YG
Sbjct: 546 -SQGVPPYVIFHDSSLRLMAQSKPRNLGQFRQISGVVHSKVQQYG 589
>gi|401422966|ref|XP_003875970.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492210|emb|CBZ27484.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1687
Score = 368 bits (945), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/503 (40%), Positives = 289/503 (57%), Gaps = 70/503 (13%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-P 433
FPW+ +L ++VFG H +R Q EI+NA M G DVFVL+PTGGGKSL YQLPAL+ P
Sbjct: 254 FPWSTELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTGGGKSLCYQLPALMPNP 313
Query: 434 G-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
+T+V+SPL+SLIQDQ+ L+ +IPA L+G ++ + +E + + L+YVT
Sbjct: 314 AQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLFQEWAFGHVVHTLVYVT 373
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE +SD + L+ L + LL+R VIDEAHCVSQWGHDFRPDY+ L +LK++FP TP+
Sbjct: 374 PEYFGRSDHFVGTLQGLADKGLLSRFVIDEAHCVSQWGHDFRPDYRKLSVLKRQFPRTPI 433
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL--------- 603
ALTATAT V++DV++ L L + IIF+ SFNR NL + V + + +
Sbjct: 434 TALTATATDLVQQDVIKTLALRDAIIFKGSFNRANLKYSVQHVRGKQVIPVVEDLVLHRF 493
Query: 604 ---SYGHFFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
S G + L +E + G KA++YH + A + Q++W++DE+ +ICAT
Sbjct: 494 SPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHS--EAASKNERQERWTRDELQVICAT 551
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGINKPDVR+V+H ++PKSIEGY+QE GRAGRDG S CVL + +D R + +I
Sbjct: 552 IAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSECVLLSTTTDRQRQERLI- 610
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ + + +L RM++Y NDVDCRR QL HFGE+ D
Sbjct: 611 -------------------HGSKDWRASLTSLHRMLAYTLNDVDCRRRQQLHHFGEQVDV 651
Query: 776 AHC--------------------------KKTCDNC-SKIKSFIEKDVTDTAKKLVEL-- 806
C + CDNC SK+ D L++L
Sbjct: 652 HFCLTQRAAAGGGVGPPLPPASAASVSAVTQLCDNCASKLAEGWTVKEVDVGNILLDLYA 711
Query: 807 VKLTGQQFSSSHILEVFRGSLNQ 829
+ L +S ++ V+RGS+++
Sbjct: 712 IILRLGAMTSKQLIGVYRGSVSE 734
>gi|391333104|ref|XP_003740962.1| PREDICTED: Bloom syndrome protein-like [Metaseiulus occidentalis]
Length = 1216
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/532 (39%), Positives = 303/532 (56%), Gaps = 51/532 (9%)
Query: 367 DQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQ 426
D ++S F ++K + FG FR NQ++ INA + +D FVLMPTGGGKSL YQ
Sbjct: 544 DPEFSKDTFHFSKDMHEKFHNFFGLTEFRHNQKQAINAALLNNDCFVLMPTGGGKSLCYQ 603
Query: 427 LPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY 486
LPA+ G+T+V+SPL SLI DQ+ L IPAT + M +E+ +L
Sbjct: 604 LPAICSKGVTVVVSPLKSLIYDQVTKLKSMGIPATAM---MSEVSDREVYEDLRRAEPLL 660
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
KLLYVTPEK+A S++L E L+ R LAR VIDEAHCVSQWGHDFR DY LG L+Q
Sbjct: 661 KLLYVTPEKLAASNLLKNTFEKLHRRNQLARFVIDEAHCVSQWGHDFRVDYHKLGQLRQT 720
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL------WMDCEKVAERLQ 600
FP P++ALTATA+ SV++D+++ L + F QSFNRPNL + V ++
Sbjct: 721 FPGVPIMALTATASPSVRKDILKQLLMKEPKWFLQSFNRPNLRYQIVKYFSGSPVTHIIK 780
Query: 601 VGLSYGHFFLLKEFYVVSLE-----------CGHKAAFYHGSIDPAQRAFVQKQWSKDEI 649
+ +S +F Y +S + G A YH ++ A+R+ +Q W
Sbjct: 781 L-ISNKYFEKSGIVYCLSRKDCDQTAAKLESAGISAVSYHAGMNDAERSSIQDMWINGRK 839
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
+++CAT+AFGMGI+K +VRFV H LPKS+EGY+QE GRAGRDG S CVL+Y ++D+IR
Sbjct: 840 HVVCATIAFGMGIDKANVRFVFHTGLPKSVEGYYQETGRAGRDGLPSDCVLFYRFADYIR 899
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
+ +I+ G A+S ++ + NL MV +C N++DC R L L +F
Sbjct: 900 WQKLITGGAE------------TTASSRKI---HLANLWHMVRFCMNEIDCIRKLILRYF 944
Query: 770 GEKFDSAHC----KKTCDNCSKIKSFIEK--DVTDTAKKLVELVKLTGQQFSSSHI---- 819
G++FD C + TC+NC + K + + D TD A L+ L+ + S+I
Sbjct: 945 GQEFDKKLCSVNFETTCENCRRQKLNVARPVDCTDEALDLLTLIAKKCKYKPHSYITYLL 1004
Query: 820 -LEVFRGSLNQYVKKHRHETLSLHGAGKH----LAKSEASRILRHLVIEDFL 866
++VF+GS + ++K T ++G K + K+ R++ L+ + +L
Sbjct: 1005 LIDVFKGSNSDKIRKDNLTTEPVYGRAKERLLGIDKTLPERVVDRLIADGYL 1056
>gi|156359349|ref|XP_001624732.1| predicted protein [Nematostella vectensis]
gi|156211530|gb|EDO32632.1| predicted protein [Nematostella vectensis]
Length = 582
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 206/491 (41%), Positives = 288/491 (58%), Gaps = 51/491 (10%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WSS F W++++EA K VF +FR Q E INATMSG D ++MPTGGGKSL +QLPA
Sbjct: 66 WSSTAFSWSQEVEAALKNVFKIDTFRHLQLECINATMSGVDCILIMPTGGGKSLCFQLPA 125
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
++ G+TLV+SPLVSL++DQ+ L + I A L+ + E + + K+L
Sbjct: 126 VVSKGLTLVVSPLVSLMEDQLWALKRLGIKAALLNASSTREEVNSVHASIVDKKSDLKML 185
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + +LE LL+RIVIDE HC SQWGHDFRPDY+ LGILK+++P
Sbjct: 186 YVTPEKIAKSKRFMAKLEKSYESGLLSRIVIDEVHCTSQWGHDFRPDYKILGILKRQYPG 245
Query: 550 TPVLALTATATASVKEDVVQALGL-VNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHF 608
P+L LTATAT V EDV + LGL NC++ + SFNRPNL+ + + +S H
Sbjct: 246 VPILGLTATATTKVIEDVKKILGLHANCLLLKASFNRPNLFYEVQSKPTTNSAFMSTIHQ 305
Query: 609 FLLKEF-------YV--------VSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
+ K F Y V++E G KAA YH + P R+ V W+ +++
Sbjct: 306 LITKRFSGDSGIIYCFSRKDAEQVAIEMSSRGIKAACYHADMPPESRSQVHMAWTTNKLQ 365
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
++ ATVAFGMGI+K +VRFVIHHS KS+E Y+QE GRAGRD +R+SC+++Y D R
Sbjct: 366 VVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGRDEKRASCIVFYRPFDIFRH 425
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
M+ FT +T +NL +V YC+ CRR L HFG
Sbjct: 426 STMV---------FTE--------------QTGLQNLYGIVRYCQQQGVCRRTLIGRHFG 462
Query: 771 EKFDSAHCKKTCDNCSKI---KSFIE-KDVTDTAK---KLVELVKLTGQQFSSSHILEVF 823
E +D A CK+ CDNCS+ + E D+T A K++E K G + +++ +++ +
Sbjct: 463 EGWDPAQCKQMCDNCSRRDDERGLNELHDITQYASDLLKILEQAKAAGDRVTANKLVDAW 522
Query: 824 --RGSLNQYVK 832
RG+++ V+
Sbjct: 523 CGRGAVSLRVR 533
>gi|146088064|ref|XP_001465982.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
infantum JPCM5]
gi|134070083|emb|CAM68416.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
infantum JPCM5]
Length = 1946
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/503 (40%), Positives = 289/503 (57%), Gaps = 70/503 (13%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-P 433
FPW+ +L ++VFG H +R Q EI+NA M G DVFVL+PTGGGKSL YQLPAL+ P
Sbjct: 505 FPWSAELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTGGGKSLCYQLPALMPNP 564
Query: 434 G-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
+T+V+SPL+SLIQDQ+ L+ +IPA L+G ++ + +E S + + L+YVT
Sbjct: 565 AQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLFQEWASGHVVHTLVYVT 624
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE +SD + L+ L + LL R VIDEAHCVSQWGHDFRPDY+ L +LK++FP TP+
Sbjct: 625 PEYFGRSDHFVGTLQGLADKGLLCRFVIDEAHCVSQWGHDFRPDYRKLSVLKRQFPRTPI 684
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL--------- 603
ALTATAT V++DV++ L L + IIF+ SFNR NL + V + + +
Sbjct: 685 TALTATATDLVQQDVIKTLALRDAIIFKGSFNRANLKYSVQHVRGKQVIPVVEDLVLHRF 744
Query: 604 ---SYGHFFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
S G + L +E + G KA++YH + A + Q++W++DE+ +ICAT
Sbjct: 745 SPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHS--EAASKNERQERWTRDELQVICAT 802
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGINKPDVR+V+H ++PKSIEGY+QE GRAGRDG S CVL + +D R + +I
Sbjct: 803 IAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSECVLLSTTTDRQRQERLI- 861
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ + + +L RM++Y N+VDCRR QL HFGE+ D
Sbjct: 862 -------------------HGSKDWRASLTSLHRMLAYTLNNVDCRRRQQLHHFGEQVDV 902
Query: 776 AHC--------------------------KKTCDNC-SKIKSFIEKDVTDTAKKLVEL-- 806
C + CDNC SK+ D L++L
Sbjct: 903 HFCLTQRAAAGGGAGPPLPPTPAASVSVVTQLCDNCASKLAEGWTVKEVDVGNILLDLYA 962
Query: 807 VKLTGQQFSSSHILEVFRGSLNQ 829
+ L +S ++ V+RGS+++
Sbjct: 963 IILRLGTMTSKQLIGVYRGSVSE 985
>gi|398016123|ref|XP_003861250.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Leishmania
donovani]
gi|322499475|emb|CBZ34548.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Leishmania
donovani]
Length = 1946
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/503 (40%), Positives = 289/503 (57%), Gaps = 70/503 (13%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-P 433
FPW+ +L ++VFG H +R Q EI+NA M G DVFVL+PTGGGKSL YQLPAL+ P
Sbjct: 505 FPWSAELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTGGGKSLCYQLPALMPNP 564
Query: 434 G-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
+T+V+SPL+SLIQDQ+ L+ +IPA L+G ++ + +E S + + L+YVT
Sbjct: 565 AQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLFQEWASGHVVHTLVYVT 624
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE +SD + L+ L + LL R VIDEAHCVSQWGHDFRPDY+ L +LK++FP TP+
Sbjct: 625 PEYFGRSDHFVGTLQGLADKGLLCRFVIDEAHCVSQWGHDFRPDYRKLSVLKRQFPRTPI 684
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL--------- 603
ALTATAT V++DV++ L L + IIF+ SFNR NL + V + + +
Sbjct: 685 TALTATATDLVQQDVIKTLALRDAIIFKGSFNRANLKYSVQHVRGKQVIPVVEDLVLHRF 744
Query: 604 ---SYGHFFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
S G + L +E + G KA++YH + A + Q++W++DE+ +ICAT
Sbjct: 745 SPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHS--EAASKNERQERWTRDELQVICAT 802
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGINKPDVR+V+H ++PKSIEGY+QE GRAGRDG S CVL + +D R + +I
Sbjct: 803 IAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSECVLLSTTTDRQRQERLI- 861
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ + + +L RM++Y N+VDCRR QL HFGE+ D
Sbjct: 862 -------------------HGSKDWRASLTSLHRMLAYTLNNVDCRRRQQLHHFGEQVDV 902
Query: 776 AHC--------------------------KKTCDNC-SKIKSFIEKDVTDTAKKLVEL-- 806
C + CDNC SK+ D L++L
Sbjct: 903 HFCLTQRAAAGGGAGPPLPPTPAASVSVVTQLCDNCASKLAEGWTVKEVDVGNILLDLYA 962
Query: 807 VKLTGQQFSSSHILEVFRGSLNQ 829
+ L +S ++ V+RGS+++
Sbjct: 963 IILRLGTMTSKQLIGVYRGSVSE 985
>gi|262163729|ref|ZP_06031469.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM223]
gi|262027709|gb|EEY46374.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM223]
Length = 620
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 232/652 (35%), Positives = 354/652 (54%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I+A + G D V+MPTGGGKSL YQ+PAL+C G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIDAALQGRDSLVIMPTGGGKSLCYQIPALVCEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
+L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SNLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + E
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADE- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|405119097|gb|AFR93870.1| ATP-dependent DNA helicase hus2/rqh1 [Cryptococcus neoformans var.
grubii H99]
Length = 934
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/540 (39%), Positives = 299/540 (55%), Gaps = 51/540 (9%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP-- 433
PW+K++ ++VF +FR +Q+E I+ TM+G DVFVLMPTGGGKSLTYQLPA +C
Sbjct: 91 PWSKEVNQKLRQVFKLPNFRKHQKEAIDETMAGKDVFVLMPTGGGKSLTYQLPA-VCSSG 149
Query: 434 ---GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G+T V+SPL+SLI DQ HL+ IPA +G++ ++ EL+ K++Y
Sbjct: 150 KTRGVTFVVSPLISLINDQTRHLISRGIPAIAYTGDLTQRDKNVAHEELSKREPITKVVY 209
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
VTPE ++ + L L R+ LAR VIDEAHCVSQWGHDFR DY LG L++ +P
Sbjct: 210 VTPEMMSMGGHIKSILRGLLQRKQLARFVIDEAHCVSQWGHDFRADYLRLGELRRDYPGV 269
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------------KVA 596
P++ALTATA V+ED++++L + C+ RQSFNRPNL + +
Sbjct: 270 PIMALTATAQNKVQEDIIRSLRIEGCVCLRQSFNRPNLHYEVRPKTSSVIQEIVAFVRTQ 329
Query: 597 ERLQVGLSYGHFFLLKEFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICA 654
E G+ Y + E L H +A YH + R +Q+ W + I+ A
Sbjct: 330 EARASGIVYCNSRDNCENLAKKLREDHGLRAYHYHAGMTKENRRKMQEGWQDHKFEIMVA 389
Query: 655 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI 714
T+AFGMGI+KPDVR+VIHH LP+S+EGY+QE GRAGRDG S+C+LYY++ D ++ I
Sbjct: 390 TIAFGMGIDKPDVRYVIHHHLPRSLEGYYQETGRAGRDGNPSTCILYYAFKDGKKILGQI 449
Query: 715 SQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD 774
Q + T A+ VL YC N VDCRR L F E FD
Sbjct: 450 DQ----EKDLTRDQKERQKASMQEVLR-----------YCNNKVDCRRSQVLAFFNETFD 494
Query: 775 SAHCKKTCDNC--SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHIL-----EVFRGSL 827
+A+C + CD C F +DVTD A ++++V Q FS++ I E FRG
Sbjct: 495 AANCHQGCDVCLGRDRNVFRTEDVTDDAVTVIKMV----QAFSNTKITILNAAECFRGFK 550
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQ 887
K+ GAG+ ++E R+++ LVIE L E +S G ++ L+V +
Sbjct: 551 GNSGKRLNQN--PYFGAGQSWERNEGERLIQTLVIEGALEEYCVESKA-GWTNAYLRVGK 607
>gi|357113938|ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Brachypodium
distachyon]
Length = 704
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 250/709 (35%), Positives = 355/709 (50%), Gaps = 106/709 (14%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ WS F W + + VFG S+R NQREIIN+ MSG DV V+M GGGKSL YQL
Sbjct: 65 EDWSG-KFSWDSQADDIRFNVFGISSYRSNQREIINSIMSGKDVLVIMAAGGGKSLCYQL 123
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA++ GI LV+SPL+SLIQDQ+M L IPA L+ ++ I + L + K
Sbjct: 124 PAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTNKEVEKLIYKALEKGEGELK 183
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
+LYVTPEK++KS + +LE + L+ + IDEAHC SQWGHDFRPDY+ LGILK +F
Sbjct: 184 ILYVTPEKISKSKRFMSKLEKCHHAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKIQF 243
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL---- 603
P+ P++ALTATAT+ V+ D+++ L + C+ F + NRPNL+ KV E+ VG
Sbjct: 244 PSVPMIALTATATSKVQMDLIEMLHIPRCVKFVSTVNRPNLYY---KVYEKSSVGKVVID 300
Query: 604 --------SYG-------HFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWS 645
SY + F KE V+ E G A +YH +D R V +WS
Sbjct: 301 EIANFITESYPNKESGIVYCFSRKECEQVAKELRERGIAADYYHADMDSVAREKVHMRWS 360
Query: 646 KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYS 705
K + +I TVAFGMGINKPDVRFV+HHSL KS+E Y+QE GRAGRDG S CVLYY
Sbjct: 361 KSKSQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRAGRDGLPSECVLYYRPG 420
Query: 706 DFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
D R M+ N G +NL +V YC++ CRR
Sbjct: 421 DVPRQSSMVF-----------------YENCG------LQNLYDIVRYCQSKKSCRRGAF 457
Query: 766 LVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRG 825
HFGE C CDNC+ + D T K +V L++ + +L++
Sbjct: 458 FQHFGEAVQ--ECNGMCDNCASSIELKDIDATYHTKIIVSLLQDMQHNDQRATLLQL--- 512
Query: 826 SLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK----KSDVYGSVSS 881
++++ K +H S L K E +++ L+I+ L EE + ++ Y ++
Sbjct: 513 -VDKFKTKWKHSGCSNEAV--DLKKEEIEQLIVQLIIDRVLKEEFQHTAYTTNAYVALGP 569
Query: 882 VLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQP 941
+ K+ + N ++ AI+S D A S ++S
Sbjct: 570 LWKLAL---------QGNRPVKLTGAIHS-----QDTGGASKSTKRSQMS---------- 605
Query: 942 QNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEIN 1001
NL AKL LR + + G G+ + + + LS P T EL N
Sbjct: 606 ------NLEAKLDD----LRRTISSDNG-GIFPHAVLSTQQISLLSSHKPTTIAELE--N 652
Query: 1002 GIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDEN 1050
IGK K KYG ++E ++S I +G + N + ++++D++
Sbjct: 653 LIGKVKADKYGSDIIEVMQSEI--------DGGKDSGENGAKRQKKDKD 693
>gi|293332763|ref|NP_001168975.1| uncharacterized protein LOC100382802 [Zea mays]
gi|223974195|gb|ACN31285.1| unknown [Zea mays]
Length = 710
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 262/731 (35%), Positives = 368/731 (50%), Gaps = 132/731 (18%)
Query: 368 QKWSSWDFPWTKKLEANNKK--VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTY 425
+ WS FPW LEA++ + +FG S+R NQREIINA MSG DV V+M GGGKSL Y
Sbjct: 65 EDWSG-SFPW--DLEADDTRFNIFGISSYRSNQREIINAVMSGRDVLVIMAAGGGKSLCY 121
Query: 426 QLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK 485
QLPA++ GI LV+SPL+SLIQDQ+M L IPA L+ ++ I + L+ +
Sbjct: 122 QLPAVLRDGIALVVSPLLSLIQDQVMGLSALGIPAYMLTSTTNKEVEKFIYKTLDKGEGE 181
Query: 486 YKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQ 545
K+LYVTPEK++KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ LGILK
Sbjct: 182 LKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKI 241
Query: 546 KFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL-- 603
+FP+ P++ALTATAT+ V+ D+++ L + CI F + NRPNL+ KV+E+ VG
Sbjct: 242 QFPSVPMIALTATATSKVQMDLMEMLHIPRCIKFVSTVNRPNLFY---KVSEKSPVGKVV 298
Query: 604 ----------SYG-------HFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQ 643
SY + F KE V+ E G A +YH +D R + +
Sbjct: 299 IDEITKFISESYPNNESGIIYCFSRKECEQVAKELRERGISADYYHADMDIVNREKIHMR 358
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
WSK + +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LYY
Sbjct: 359 WSKGKSQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYR 418
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
D R M+ N G +NL +V YC++ CR
Sbjct: 419 PGDVPRQSSMVF-----------------YENCG------LQNLYDIVRYCQSKRSCRHG 455
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV---KLTGQQFSSSHIL 820
HFGE C CDNC+ + DVT K +V L+ +L Q+ + ++
Sbjct: 456 AFFRHFGEV--PQDCNGMCDNCASTIEQKDIDVTYHTKIIVSLLHDMQLNDQRATLLQLV 513
Query: 821 EVFR------GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK--- 871
+ F+ GS N+ V L K E +++ +L++++ L EE +
Sbjct: 514 DKFKSKWKGLGSFNEAVD---------------LRKEEVEQLIVNLILDNVLKEEFQHTA 558
Query: 872 -KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKL 930
++ Y ++ ++ K + N V++ AI SK +KG+ G++
Sbjct: 559 YSTNAYVTLGALWKPAL---------QGNRVVKLEIAIA----SKDRDVRSKGA-KRGRM 604
Query: 931 SPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRV 990
S +L AKL LR L + + + + + LS +
Sbjct: 605 S----------------DLEAKLDE----LRRDLSSTGSDAIFPHAVLTAQQISLLSSQK 644
Query: 991 PRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDEN 1050
P T EL ++ IGK K KYG +++E + S D +GS GK DE+
Sbjct: 645 PTTPAELEKV--IGKVKTRKYGSKIIELMRS-------HDNSGSG------RGKEAGDEH 689
Query: 1051 EAPNANKGDDD 1061
A D+D
Sbjct: 690 RAKKIKTKDED 700
>gi|402471219|gb|EJW05076.1| RecQ family ATP-dependent DNA helicase [Edhazardia aedis USNM 41457]
Length = 1768
Score = 367 bits (941), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 210/503 (41%), Positives = 295/503 (58%), Gaps = 44/503 (8%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VF +FR Q+E+I A +S DVFVLMPTGGGKS+ +QLPA+I GITLV+SPL+SLIQ
Sbjct: 1063 VFKLQNFRSQQKEVIEAALSHDDVFVLMPTGGGKSICFQLPAIITDGITLVVSPLLSLIQ 1122
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQI +LL+ NI A +S + TE++ + L K+ YVTPE + S + +
Sbjct: 1123 DQIKNLLKKNIIALAISSQLTETERRFVFEILKQPDPICKIFYVTPELIVNSSLF----Q 1178
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLG-ILKQKFPN-TPVLALTATATASVKE 565
+ + +ARIVIDEAHCVSQWGHDFRPDY+ +G +++ F + P++ALTATA+ V+E
Sbjct: 1179 DIIRKTKVARIVIDEAHCVSQWGHDFRPDYKRVGTVIEDLFEHKIPLMALTATASPRVRE 1238
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGL----------SYGHFFLL--K 612
D++ AL + N IF SFNRPNL + +K+++ + + S G + L K
Sbjct: 1239 DIINALRMRNIKIFAMSFNRPNLVYFVRKKMSKDVDTEIVSFISTHYPESSGIIYCLSQK 1298
Query: 613 EFYVVSL----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
+ ++S + G K FYH + +R Q W++++ II AT+AFGMGI+K DVR
Sbjct: 1299 DCEMISERYNDKYGLKTRFYHAGLSKNERIETQNAWNENKFLIIVATIAFGMGIDKKDVR 1358
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FVIH+SLPKS+EGY+QE GRAGRDG S+C+L+YS+ D ++ MI G
Sbjct: 1359 FVIHYSLPKSLEGYYQETGRAGRDGLNSTCILFYSFKDKKILEFMIDHS-------KTGS 1411
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
N+ + LE L +++ YCEN CRR + L H GE F + C KTCDNC KI
Sbjct: 1412 NK-----KLQRLE-----LQKVIDYCENTSMCRRDIVLKHLGEHF-TGECNKTCDNCMKI 1460
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K +VT AK + V L + + I V++GS + +K H HG G L
Sbjct: 1461 KRKTMVNVTVHAKNIYNFV-LGNSDMTIAQIAAVYKGS--KGIKNTSHRDNFYHGKGSDL 1517
Query: 849 AKSEASRILRHLVIEDFLMEEVK 871
K I++ ++ E L E+ K
Sbjct: 1518 KKENIEAIIKKMIFEGHLTEQRK 1540
>gi|157870239|ref|XP_001683670.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania major
strain Friedlin]
gi|68126736|emb|CAJ05096.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania major
strain Friedlin]
Length = 1691
Score = 366 bits (939), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 205/504 (40%), Positives = 290/504 (57%), Gaps = 72/504 (14%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-P 433
FPW+ +L ++VFG H +R Q EI+NA M G DVFVL+PTGGGKSL YQLPAL+ P
Sbjct: 251 FPWSAELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTGGGKSLCYQLPALMPNP 310
Query: 434 G-ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
+T+V+SPL+SLIQDQ+ L+ +IPA L+G ++ + +E S + + L+YVT
Sbjct: 311 AQVTIVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLFQEWASGHVVHTLVYVT 370
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE +SD + L+ L + LL R VIDEAHCVSQWGHDFRPDY+ L +LK++F TP+
Sbjct: 371 PEYFGRSDHFVGTLQGLADKGLLCRFVIDEAHCVSQWGHDFRPDYRKLSVLKRQFLRTPI 430
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL--------- 603
ALTATAT V++DV++ L L + IIF+ SFNR NL + V + + +
Sbjct: 431 TALTATATDLVQQDVIKTLALRDAIIFKGSFNRANLKYSVQHVRGKQVIPVVEDLVLHRF 490
Query: 604 ---SYGHFFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
S G + L +E + G KA++YH + A + Q++W++DE+ +ICAT
Sbjct: 491 SPSSCGIVYCLSRKDCEEMAAALVRRGIKASYYHS--EAASKNERQERWTRDELQVICAT 548
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGINKPDVR+V+H ++PKSIEGY+QE GRAGRDG S CVL + +D R + +I
Sbjct: 549 IAFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSECVLLSTTTDRQRQERLI- 607
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
+ + + +L RM++Y NDVDCRR QL HFGE+ D
Sbjct: 608 -------------------HGSKDWRASLTSLHRMLAYTLNDVDCRRRQQLHHFGEQVDV 648
Query: 776 AHC--------------------------KKTCDNC-SKIK---SFIEKDVTDTAKKLVE 805
C + CDNC SK+ + E DV + L
Sbjct: 649 HFCLTQRAAAGGGAMPPLPPTSAASVSAVTQLCDNCASKLAEGWTVKEVDVGNILLDLYA 708
Query: 806 LVKLTGQQFSSSHILEVFRGSLNQ 829
++ G +S ++ V+RGS+++
Sbjct: 709 IILRLG-TMTSKQLIGVYRGSVSE 731
>gi|123494203|ref|XP_001326459.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121909374|gb|EAY14236.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1081
Score = 366 bits (939), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 233/667 (34%), Positives = 346/667 (51%), Gaps = 76/667 (11%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
K+ N+KVF + FR QR+ I A ++G DVFVLMPTGGGKSL YQLP + GITLV+
Sbjct: 367 KMNIVNQKVFHHMHFRGKQRDAIGAALNGKDVFVLMPTGGGKSLCYQLPGYMQGGITLVV 426
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL+SLIQDQ+ L++ NI A + + E+ R+++++ ++ L++TPEK+
Sbjct: 427 SPLISLIQDQVRSLVELNIEAMSFGADTSKEKYSEMWRKISNNSLRF--LFLTPEKIMAG 484
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L L L L R VIDEAHCVSQWGHDFRPDY L L+ +FPN ++ALTATA
Sbjct: 485 STLDGFLTQLYNENRLTRFVIDEAHCVSQWGHDFRPDYTQLSNLRVRFPNVRIMALTATA 544
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL-----------SYGHF 608
T +V++D+V+ LG+ C +F+ SFNRPN++ + K + S G
Sbjct: 545 TDAVQKDIVENLGIKGCSLFKSSFNRPNIFYEVMKKETGFREAALKWIEEKNYRNSTGIV 604
Query: 609 FLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
F + ++ + G A FYH +D R Q +W+K + +I AT+AFGMGI+
Sbjct: 605 FCMSTAETEQIAKFFQDNGLSAKFYHAKMDKNDRKMTQIEWTKGRVKVIVATLAFGMGID 664
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVR+VIH ++PKS+E Y+QE GRAGRDG++S +L +S D +V MI+ +A+Q+
Sbjct: 665 KPDVRYVIHMTMPKSLEEYYQESGRAGRDGKQSHALLMFSMGDKSKVHRMIT--MADQN- 721
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G + S +E + L M Y + CRR+L L +FGE FD +C TCD
Sbjct: 722 --TGETK-----SRERIEVEDQLLNHMTEYGIEKMTCRRVLLLRYFGENFDPKNCNTTCD 774
Query: 784 NCSKIKSFIEK---DVTDTAKKLVELV-----KLTGQQFSS-SHILEVFRGSLNQYVKKH 834
NC + EK D+TD K + +V K F++ +HI +V+ GS + + K
Sbjct: 775 NCQRRMKNHEKIDIDMTDHLKNIAMIVDGIYRKRKRAPFATGNHITDVYTGSKSSKIMKC 834
Query: 835 RHETLSLHGAGKHLAKSEASRILRHL--VIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
R L + G L SRI + L ++ ++ KS YG + + N S N
Sbjct: 835 RDNDLPQYNLGSDLKGKTKSRIYQCLQELVSRRIIRLTSKSSKYGVIEYYVPDNISLI-N 893
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK 952
L + V+ + N LS ++ LL KL +R+
Sbjct: 894 LRDFKPFVIYEYKET-NDEGLSNEEI------LLYNKLKEARDQ---------------- 930
Query: 953 LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
K A EG+ N+ L+ ++K P +++L ++ + K ++ K G
Sbjct: 931 -------------KLAIEGIDVEQFMPNSCLRSIAKNHPTNQDDLKKLKVMTKTRMDKLG 977
Query: 1013 VRLLETI 1019
L +
Sbjct: 978 DEFLRVL 984
>gi|356531519|ref|XP_003534325.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Glycine max]
Length = 695
Score = 365 bits (938), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 257/688 (37%), Positives = 354/688 (51%), Gaps = 103/688 (14%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS +F W + + VFG S+R NQREIINA MSG DV V+M GGGKSL YQLPA
Sbjct: 66 WSG-EFEWDSEADDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSLCYQLPA 124
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
++ GI LV+SPL+SLIQDQ+M L IPA L+ + E+ I + L + K+L
Sbjct: 125 VLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTSTNKGDEKF-IYKTLEKGEGELKIL 183
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK++KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ L ILK +FP
Sbjct: 184 YVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLSILKTQFPR 243
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEK----------VAER 598
P++ALTATAT V+ D+++ L + C+ F + NRPNL +M EK +AE
Sbjct: 244 VPIVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDEIAEF 303
Query: 599 LQ-------VGLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDE 648
+Q G+ Y F KE V+ E G A +YH +D R V +WS ++
Sbjct: 304 IQESYPNNESGIVYC--FSRKECEQVAKELRERGISADYYHADMDVNAREKVHMRWSNNK 361
Query: 649 INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFI 708
+ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LY+ D
Sbjct: 362 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDAP 421
Query: 709 RVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVH 768
R M+ NSG +NL +V YC + CRR H
Sbjct: 422 RQSSMVF-----------------YENSG------LQNLYDIVRYCLSKRQCRRSAFFHH 458
Query: 769 FGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLN 828
F E C CD C+ E DV+ AK +V L L Q + R ++
Sbjct: 459 FAEPLQ--ECNGMCDICAFSSEVKEVDVSGHAKLMVSL--LQDMQANDQ------RSTML 508
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK----KSDVYGSVSSVLK 884
Q V K + + L G L + E +++ HL++ FL EE + ++ Y +V S+
Sbjct: 509 QLVDKMKIKQKEL---GSELKREEIEQLILHLLLARFLKEEFQHTPYATNAYIAVGSL-- 563
Query: 885 VNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNE 944
A ++ G+++V L I + + +K V AK L S L E
Sbjct: 564 -----AKQILQGKKSVKLE----IYTEQRTKDGVRSAKQCLGSSGL-------------E 601
Query: 945 VDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIG 1004
+ L+ K SS A G++ + + + L+ + P + E+L ++ IG
Sbjct: 602 LKLDELRKELSS-----------AHGGILPHSVLSTEQIIQLASQKPNSLEQLEKL--IG 648
Query: 1005 KAKVSKYGVRLLETIESTIKEFYKTDKN 1032
K + KYG R+L+ IE +F TDK
Sbjct: 649 KLRTEKYGNRILKQIEKYY-DFEPTDKQ 675
>gi|336476813|ref|YP_004615954.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
gi|335930194|gb|AEH60735.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
Length = 611
Score = 365 bits (938), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 221/652 (33%), Positives = 352/652 (53%), Gaps = 85/652 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+K FG + FRP Q+EII+ + G D F LMPTGGGKSL YQLPAL+ G+T+VISPL+SL
Sbjct: 6 QKYFGYNDFRPLQKEIISDILEGKDTFALMPTGGGKSLCYQLPALMMDGVTVVISPLISL 65
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ +L I A +L+ + +++ +++ +L + + K+LYV PE++ SD
Sbjct: 66 MKDQVDNLKSNGIAAEYLNSTLGYSQIKQVHEKLIDN--RIKILYVAPERLIMSDTF--- 120
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
S + ++ +DEAHC+S+WGHDFRP+Y+ L ILK++F N P++ALTATA+ V++
Sbjct: 121 --SYLKKGKVSMFAVDEAHCISEWGHDFRPEYRRLNILKKRFRNVPIVALTATASPKVEK 178
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE------------RLQVGLSYGHFFLLKE 613
D+V+ L L +C +R SFNR NL+ + + R + G+ Y + E
Sbjct: 179 DIVKQLSLEDCRTYRASFNRKNLFYHVKTKKDTYRQLKAYLKKHRGESGIIYCQSRSMVE 238
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L + G K YH + +R + Q + +D +II ATVAFGMGI+KPDVRFVIH
Sbjct: 239 TLSKRLNKDGFKTLAYHAGLSDFKREYNQNSFIQDNTDIIVATVAFGMGIDKPDVRFVIH 298
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LPK++E Y+QE GR GRDG CVL++SY+D ++++ I Q ++
Sbjct: 299 YDLPKNLESYYQETGRGGRDGLPCECVLFFSYADKYKIEYFIEQKKTKEER--------- 349
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L +M++YCE++ CRR + L +FGE + ++CKK CD C K
Sbjct: 350 --------DAALMQLRQMINYCESN-QCRRKVLLEYFGETYPESNCKK-CDVCLNPKEKF 399
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
E T A+ +++ +K Q++ + + ++V GS ++ ++K+ H L +G G+ K +
Sbjct: 400 EG--TKYAEMILKCIKDLDQRYGACYTVDVLTGSGSKKIQKNSHHLLESYGKGEFFTKKQ 457
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA---IN 909
ILR L+ + L ++ G +L +N K+ +++ G + L PS +N
Sbjct: 458 WLDILRELINKGILEQK-------GGRYPILNLN-GKSEDVLNGNLRIELTVPSKTVNVN 509
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
S K + P L+ SLR LR + E
Sbjct: 510 SEKNLNEEAIPG-------------------------------LFKSLRKLRKQIADE-- 536
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ V Y IF + +L ++ +P E L+I+G+G+ K+ KYG + I S
Sbjct: 537 QNVPPYIIFSDRSLMEMASTLPENHVEFLKIHGVGEHKLKKYGPAFINEIRS 588
>gi|254443570|ref|ZP_05057046.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
gi|198257878|gb|EDY82186.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
Length = 616
Score = 365 bits (938), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 233/666 (34%), Positives = 358/666 (53%), Gaps = 86/666 (12%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
T ++ A KK FG+ +FRP Q EI+ ++G DVF L+PTGGGKSL YQLPA++ G+T+
Sbjct: 6 TDRVHAALKKYFGHDTFRPLQAEIVADALAGRDVFALLPTGGGKSLCYQLPAVLSEGLTV 65
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL++L++DQ+ L + I ATFL+ ++ + + +L + Y++LYV PE++
Sbjct: 66 VISPLIALMKDQVDGLTENGIAATFLNSSLGKKDAAQRYAKLFAG--DYQVLYVAPERL- 122
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+L LE L ++ R +DEAHC+S+WGHDFRP+Y+ L L+++FP+TP +ALTA
Sbjct: 123 ---MLGGFLEDLKKWKV-CRFAVDEAHCISEWGHDFRPEYRQLAELRKRFPDTPFMALTA 178
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVV 617
TAT V+ D+V+ L L + + SFNRPNL ++ ++ V F + F
Sbjct: 179 TATDRVRGDIVKQLQLHDPTDYVASFNRPNL---AYRIEQKQAVFRQILKFVKSRPFESG 235
Query: 618 SLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
+ C G +A YH + P QRA Q + +DE+ ++CAT+AFGMG
Sbjct: 236 IIYCFSRKATEQTADRLRQEGVEAIAYHAGMTPLQRAKNQDAFIRDEVKVVCATIAFGMG 295
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
I+KP+VR+VIH +PK+IEGY+QE GRAGRDG S CV+Y+S D + + I AE+
Sbjct: 296 IDKPNVRYVIHQDIPKNIEGYYQETGRAGRDGLPSECVMYFSPGDVAKQLNFI----AEK 351
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
P + E E L ++V+Y E+ CRR + L +F E + +C
Sbjct: 352 EP--------------QEREVAKEQLRQIVNYAESS-RCRRAVLLDYFSETWKEGNC-GN 395
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELV----KLTGQQFSSSHILEVFRGSLNQYVKKHRHE 837
CDNC++ K D T A+K + + ++T +HI ++ GS N+ V K HE
Sbjct: 396 CDNCNQPKETF--DGTIPAQKFMSCIFRVSQVTSFGVGINHIADILLGSRNEKVLKWGHE 453
Query: 838 TLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGR 897
L+ + G ++E R L+ D++ ++ D +G++S + +
Sbjct: 454 RLTTYNIGGEHKRAEWQAFGRELIRNDYVFQD---PDAFGALS-------------LTEK 497
Query: 898 QNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSL 957
LR + I TKL S + L RN +++ + + L+S L
Sbjct: 498 GKTALRERTPIQLTKLPVS----------ANALQRDRN------RSKGGIECNEDLFSIL 541
Query: 958 RMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLE 1017
R LR L E +GV Y IF + TL+ +++ P E+ L EI+G+G K++ YG LE
Sbjct: 542 RSLRKELADE--QGVPPYIIFSDVTLREMARYFPANEDRLSEISGVGMKKLAAYGEAFLE 599
Query: 1018 TIESTI 1023
I I
Sbjct: 600 AITEFI 605
>gi|47217239|emb|CAF96762.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 365 bits (938), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 196/517 (37%), Positives = 295/517 (57%), Gaps = 58/517 (11%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
DFPW+K++ + K F FRP Q +N T+SG D+F++MPTG GKSL YQLPAL
Sbjct: 1 DFPWSKEVAQHLKDTFHLPKFRPLQLRAVNLTLSGRDLFLVMPTGRGKSLCYQLPALCSK 60
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
G TLV++PLVSL++DQ+M+L ++ A L+ + + +L L ++L+YVTP
Sbjct: 61 GFTLVVTPLVSLMEDQVMYLQSISVSAAMLNASSSKEHAKTVLAGLTDPKTPFRLVYVTP 120
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
EK+AKS +L+ +LE +LL+RI +DE HC SQWGHDFRPDY+ LGILK++FP P++
Sbjct: 121 EKIAKSKLLMSRLEKAYKADLLSRIAVDEVHCCSQWGHDFRPDYKLLGILKRQFPKVPLI 180
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-----------------KVA 596
LTATAT V ED + L + I SFNR NL+ + K
Sbjct: 181 GLTATATRGVLEDCEKILCVRQPITITASFNRTNLYYEVRVKNSDNDASVNDIASLIKTR 240
Query: 597 ERLQVGLSYGHFFLLKEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKDEINIIC 653
R Q G+ Y F K+ VS E + A YH ++DP+ ++ + ++W+ ++I ++
Sbjct: 241 YREQSGIVY--VFSQKDAESVSSELQKRDILAYPYHANMDPSDKSRIHRRWTTNKIQVVV 298
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
ATVAFGMGI+KPDVRFVIHH++ KS+E Y+QE GRAGRD + + C++++ +SD RV M
Sbjct: 299 ATVAFGMGIDKPDVRFVIHHTISKSVENYYQESGRAGRDDRPADCIVFFGFSDIFRVSTM 358
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLR-MVSYCENDVDCRRLLQLVHFGEK 772
+ V+ET + LR M+ YC+N CRR L VHF E
Sbjct: 359 V------------------------VMETVGQQKLRQMLDYCQNIDRCRRSLLAVHFDEV 394
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTG---QQFSSSHILEVFRGSLNQ 829
+D C++ CD C K + D++ A++LV +++L ++ + ++E + G
Sbjct: 395 WDDEGCQQMCDTCRHAKEVVATDISQHARQLVHILELAASLDEKMTPLKLVEAWTGRGPA 454
Query: 830 YVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFL 866
+K T L++ A ++ L+++D+L
Sbjct: 455 KRRKMIQTT--------ALSRERAEAVVVRLLLKDYL 483
>gi|242022338|ref|XP_002431597.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
gi|212516905|gb|EEB18859.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
Length = 652
Score = 365 bits (937), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 190/456 (41%), Positives = 265/456 (58%), Gaps = 41/456 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS FPW++K++ K+ F FRP Q E+INAT+S DV ++MPTGGGKSL YQLPA
Sbjct: 59 WSLKTFPWSQKVDNLLKENFKISEFRPFQLEVINATLSKEDVILIMPTGGGKSLCYQLPA 118
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L+ GITLV+SPLVSL++DQ+M L + N PA LS N + + + L K+KL+
Sbjct: 119 LVDKGITLVVSPLVSLMEDQVMALKKINYPALMLSANSSKEDVKLVTAALQDSCPKHKLI 178
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK+AKS + QL+ + + R+ IDE HC S WGHDFRPDY LGILK FP
Sbjct: 179 YVTPEKLAKSKRFMSQLQKCHQQGRFTRLAIDEVHCCSTWGHDFRPDYNYLGILKDMFPG 238
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFF 609
P+L LTAT+T+ V DV + L + C++ + +FNRPNL+ + L +
Sbjct: 239 VPLLGLTATSTSKVTADVQKMLNIQGCLVIKATFNRPNLYYEVVLKPSSQSENLDLLENW 298
Query: 610 LLKEF-------YVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
L +F Y ++ EC G KA YH +D R+ + +W +E +
Sbjct: 299 LKNKFSNKSGIIYTTAIKECEELTKELRKRGIKAGVYHAMLDAEVRSKMHTKWMSNEYQV 358
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I ATVAFGMGI+KPDVRFVIHHSL KS+E ++QE GRAGRDG+ S C++ + +D ++
Sbjct: 359 IVATVAFGMGIDKPDVRFVIHHSLSKSMENFYQESGRAGRDGKNSHCIVMFRLADVFKLS 418
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ FT + ENL M+++C N+ CRR L HF E
Sbjct: 419 TMV---------FTQ--------------QKGLENLYSMLNFCLNNDTCRRSLIAEHFDE 455
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV 807
++S C K CD+C + +F E D+T + + +++
Sbjct: 456 VWNSNFCNKMCDHCKEEPNFKEIDITSACRDIYKII 491
>gi|209882405|ref|XP_002142639.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
gi|209558245|gb|EEA08290.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
Length = 997
Score = 365 bits (937), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 206/477 (43%), Positives = 279/477 (58%), Gaps = 39/477 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+D+ W S +F W+ L N+K+FGN SFR NQREI+NA +S DVFV+MPTGGGKSL
Sbjct: 192 SDDKDWKSNEFDWSSDLYRINEKIFGNRSFRENQREIMNAIISQRDVFVMMPTGGGKSLC 251
Query: 425 YQLPALICP-----GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEI---L 476
+QLP LI P +T+V+ PL++L+ DQI L I L+ N I L
Sbjct: 252 FQLPGLI-PQNPHGSVTVVVMPLLALMVDQIEQLNLLGIKCAGLNSNQNKEVVNAIYNSL 310
Query: 477 RELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPD 536
R + C + L+VTPEK+ S+VL L +LN + L R VIDEAHCV QWG DFRPD
Sbjct: 311 RNGDPQTCP-QFLFVTPEKLKHSEVLFSILHTLNNQSRLLRFVIDEAHCVCQWGFDFRPD 369
Query: 537 YQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD----- 591
Y L L++KFPN P++ALTATAT + DV++ L +VN ++F SF+RPNL +
Sbjct: 370 YIQLCRLREKFPNVPIVALTATATRDILADVIRQLNMVNPVVFALSFDRPNLRYEVRPKI 429
Query: 592 ---CEKVAERLQVGLSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQR 637
+ V E ++ + H + Y +S EC G A +YHGS+ +R
Sbjct: 430 GNKAKLVKEVTEIISKFSHSTCI--IYCLSRSECEDICKELIKNGISATYYHGSMKDEKR 487
Query: 638 AFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSS 697
QKQW DE ++ ATVAFGMGINK DVR VIH S+PKS+E Y+QE GRAGRDG S
Sbjct: 488 NIAQKQWMSDEKQVMVATVAFGMGINKKDVRLVIHLSMPKSLENYYQESGRAGRDGMESL 547
Query: 698 CVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCEND 757
C+LYYSY D +R++ + V + +N + N G + + LL +V YCE
Sbjct: 548 CILYYSYKDVVRLQALTDINVENSNKKYRRNN--DSKNRG---DNSLHALLGIVKYCEEQ 602
Query: 758 VDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQF 814
+CRR + L HFGE F C+ CDNC ++K IE+ + + +VE + + + F
Sbjct: 603 YECRRSIILRHFGEIF-GGLCRVQCDNCRRLK--IEQPINIEVRGIVECIITSIKHF 656
>gi|118489987|gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 617
Score = 365 bits (937), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 199/428 (46%), Positives = 258/428 (60%), Gaps = 37/428 (8%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
E N +FGN +FRP Q + AT++ D FVLMPTGGGKSL YQLPA + PG+T+VIS
Sbjct: 203 FELANVVIFGNKTFRPLQHQACKATVAKQDCFVLMPTGGGKSLCYQLPATLKPGVTVVIS 262
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L+ I ATFL+ + IL+EL D KLLYVTPE++A +
Sbjct: 263 PLLSLIQDQIITLNLKFGIRATFLNSQQTSAQAAAILQELRKDKPSCKLLYVTPERIAGN 322
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L L+ L+ + LA V+DEAHCVSQWGHDFRPDY+ LG LKQ FP PV+ALTATA
Sbjct: 323 PAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFRPDYKRLGCLKQNFPVVPVMALTATA 382
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERL-QVGL--------SYGHFF 609
T SV+ED+++ L + ++ SF+RPNL + K E L Q+G G +
Sbjct: 383 THSVREDILKTLRIPGALVLETSFDRPNLKYEVIGKTKESLKQLGDLLRDRFKNQCGIVY 442
Query: 610 LLKEFYVVSL------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L + V + +C KA +YH + QR VQ++W E++I+CAT+AFGMGI+
Sbjct: 443 CLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQRVDVQRKWHTGEVHIVCATIAFGMGID 502
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA-EQS 722
KPDVRFVIH++L KSIE Y+QE GRAGRD ++C+ Y DF RV M+ G ++
Sbjct: 503 KPDVRFVIHNTLSKSIESYYQESGRAGRDSHPATCIALYQKKDFSRVVCMLRSGQGYKRE 562
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK--- 779
F P + +M SYCE +CRR + L HFGE FD CK
Sbjct: 563 SFKPAMAQAQ----------------KMKSYCELKAECRRQVLLEHFGESFDQKACKFGS 606
Query: 780 KTCDNCSK 787
CDNC K
Sbjct: 607 HPCDNCLK 614
>gi|410931808|ref|XP_003979287.1| PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Takifugu
rubripes]
Length = 610
Score = 365 bits (936), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/519 (37%), Positives = 301/519 (57%), Gaps = 50/519 (9%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
Q++ DFPW++++ + + F FRP Q +IN T+SG DVF++MPTG GKSL YQL
Sbjct: 77 QRFDGSDFPWSQEVVQHLQDTFHLPRFRPLQLRVINLTLSGRDVFLVMPTGRGKSLCYQL 136
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PAL G+TLV++PLVSL++DQ+M+L ++ A L+ + + ++ + ++
Sbjct: 137 PALCSKGLTLVVTPLVSLMEDQLMYLQSISVSAAMLNASSSKEHAKSVMAGMTDPTVPFR 196
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
L+YVTPEK+AKS +L+ +LE ELL+RI +DE HC SQWGHDFRPDY+ LGILK++F
Sbjct: 197 LVYVTPEKIAKSKLLMSRLEKAYKAELLSRIAVDEVHCCSQWGHDFRPDYKLLGILKRQF 256
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-----------CEKVA 596
P P++ LTATAT+++ +D + L + + SFNR NL+ + E +A
Sbjct: 257 PKVPLIGLTATATSTILKDCEKILSVRQPVTITASFNRTNLYYEVRVKNCDSDASVEDMA 316
Query: 597 ERL------QVGLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKD 647
+ Q G+ Y F K+ VS G A+ YH ++DP ++ V ++WS +
Sbjct: 317 SLIKSKYQHQSGIVY--VFSQKDAESVSSALQKRGILASPYHANMDPTDKSHVHRRWSTN 374
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
+I ++ ATVAFGMGI+KPDVRFVIHH++ KSIE Y+QE GRAGRD + CV+Y+ +SD
Sbjct: 375 KIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDDCPADCVIYFGFSDI 434
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
R+ M+ + N G+ + L +M+ YC++ CRR L V
Sbjct: 435 FRISTMVV-----------------MENVGQ------QKLRQMLDYCQSIDRCRRSLMAV 471
Query: 768 HFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSL 827
HF E +D C++ CD C K D+T A+++V++++L + L++
Sbjct: 472 HFDEVWDDEGCQQMCDTCRHPKDVSTVDITQHARQVVQILELAASMDEKTTPLKLVEAWT 531
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFL 866
+ K R + L++++A ++ L+++D+L
Sbjct: 532 GRGPAKRRKLIQT-----TTLSRTQAEAVVVQLLLKDYL 565
>gi|242071927|ref|XP_002451240.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
gi|241937083|gb|EES10228.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
Length = 624
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/423 (45%), Positives = 255/423 (60%), Gaps = 35/423 (8%)
Query: 385 NKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVS 444
N +FGN SFRP Q E A M+ D F+LMPTGGGKSL YQLPA + PG+T+V+SPL+S
Sbjct: 216 NVVIFGNKSFRPLQYEACRAAMNNQDCFILMPTGGGKSLCYQLPATLHPGVTVVVSPLLS 275
Query: 445 LIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
LIQDQI+ L + IPA FL+ + +++EL +KLLYVTPE++A + +
Sbjct: 276 LIQDQIVALTYKFAIPAAFLNSQQTPAQASAVIQELRYGTPSFKLLYVTPERIAANYSFM 335
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
L L+ R LLAR VIDEAHCVSQWGHDFRPDY+GLG LKQ FP P++ALTATAT SV
Sbjct: 336 EMLRGLDQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCLKQNFPRVPIMALTATATESV 395
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDC--EKVAERLQVGLSYGHFFLLKEFYVVSL-- 619
++DV+ AL + N +I ++SF+R NL + + + Q+G F+ K V L
Sbjct: 396 RKDVLSALRIPNAVILKRSFDRLNLNYEVIGKTKTPQKQLGDLLKERFMNKSGIVYCLSK 455
Query: 620 -ECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
EC A F YH + QR VQ++W E+ +ICAT+AFGMGI+KPDV
Sbjct: 456 NECADTAKFLREKYKIKCAHYHAGLAARQRTSVQEKWHSGEVKVICATIAFGMGIDKPDV 515
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH+++ KSIE Y+QE GRAGRD + C++ Y DF R+ M+ +S
Sbjct: 516 RFVIHNTMSKSIESYYQESGRAGRDDLPAHCIVLYQKKDFSRIVCMLRNADNFKS----- 570
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK---KTCDN 784
F VA E +M +YCE +CRR L HFGE+++ C+ CDN
Sbjct: 571 -ESFKVA---------MEQAKKMQTYCELKTECRRQALLEHFGEQYNRQRCRDGPSPCDN 620
Query: 785 CSK 787
C K
Sbjct: 621 CLK 623
>gi|410670594|ref|YP_006922965.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
gi|409169722|gb|AFV23597.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
Length = 705
Score = 364 bits (935), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 228/667 (34%), Positives = 360/667 (53%), Gaps = 68/667 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+K FG FRP Q++II + G D FVLMPTGGGKSL YQLPAL+ G+T+VISPL+SL
Sbjct: 6 QKYFGYSEFRPLQKDIIQDVLDGKDTFVLMPTGGGKSLCYQLPALLMDGLTVVISPLISL 65
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A FL+ +TE ++I ++ ++ K+LY+ PE++A S L
Sbjct: 66 MKDQVDSLRANGVNAAFLNSTQNYTESRKICDDIATN--DIKILYMAPERLAMSGTL--- 120
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
S+ + ++ IDE+HC+S+WGHDFRP+Y+ L +LK+KFP P++ALTATAT V+E
Sbjct: 121 --SMITKAKVSLFAIDESHCISEWGHDFRPEYRKLSMLKKKFPKVPIIALTATATPKVRE 178
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D + LGL N + SFNR NL + E L Y G + V
Sbjct: 179 DTLNQLGLTNPKTYIASFNRSNLLYEIRPKKETYDQILQYLRRNKGKGGIIYCQSRKNVD 238
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
++ + G A YH + QR Q+ + KD+ +II AT+AFGMGI+KP+VRFVIH
Sbjct: 239 TVTAKLRKAGFNALPYHAGLSDTQRGRNQEAFIKDKADIIVATIAFGMGIDKPNVRFVIH 298
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LPK++EGY+QE GR GRDG C+L++S+ D R+++ + Q
Sbjct: 299 YDLPKNLEGYYQETGRGGRDGLECECILFFSHGDRYRIEYFVKQ---------------- 342
Query: 733 VANSGRVLETNT--ENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
GR E + + L MV+YC + CRR L +FGE+ + +C CD C + K
Sbjct: 343 ---KGRKEERDIALKQLQDMVNYCVS-TTCRRKALLSYFGEELEEDNC-GGCDACLRPKE 397
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
+ D T+ AK L+ V G+++ +H+++V G+ + +K+ +H+ L + +G +
Sbjct: 398 TV--DGTEEAKLLISCVGELGERYGMNHVIDVLCGANIKKIKEKKHDKLKTYNSGYRHTR 455
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF-PSAIN 909
+ R +V + + E G +LK+N++ + R+ R P
Sbjct: 456 PSWQDMAREMVQQGVVAVE-------GIRYPLLKLNKASREVMQGSRKVAFTRIAPLEFP 508
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
T+ + D P + ++ ++P R +Q N ++L+S L+ LR +
Sbjct: 509 DTQTCEDD-EPYEPDTIAKPVTPPRARKAAQ-------NSDSELFSRLKDLRKEMANL-- 558
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKT 1029
+ V Y IF + +L+ ++ + P ++EE+L+I G+G+ K+ KYG L I Y
Sbjct: 559 QDVPPYIIFADTSLKQMAAKKPSSKEEMLKITGVGEYKLKKYGDIFLREIGR-----YCE 613
Query: 1030 DKNGSSS 1036
+KNG S+
Sbjct: 614 EKNGGST 620
>gi|198429056|ref|XP_002130932.1| PREDICTED: similar to MGC131022 protein [Ciona intestinalis]
Length = 652
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/525 (38%), Positives = 294/525 (56%), Gaps = 61/525 (11%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WSS DFPW+K + + K F FR Q E INAT+SG DV ++M TGGGKSLTYQLPA
Sbjct: 63 WSSEDFPWSKSVRSILKSTFRMDDFRSKQLEAINATLSGRDVILIMSTGGGKSLTYQLPA 122
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L+ GIT+VISPLVSL++DQI+ L + I A L+ E + + + + S ++LL
Sbjct: 123 LVGKGITVVISPLVSLMEDQIISLNRFGIEAKLLNAASTKDEVKHVHQSMTSQSPSFRLL 182
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK++KS + QLE L RI IDE HC SQWG+DFRPDY+ LGILK++FP
Sbjct: 183 YVTPEKISKSKRFMAQLEKCYKSVNLNRIAIDEVHCASQWGNDFRPDYKILGILKRQFPK 242
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM----------DCEKVAERL 599
+P++ LTAT+T V ED + L + ++F+ + +R NL+ D K +L
Sbjct: 243 SPIIGLTATSTDKVTEDTKKMLNIPFALVFKTALDRRNLFYQVREKPNTNDDVIKDIVQL 302
Query: 600 -------QVGLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEI 649
Q G+ Y F K V+ G K++ YH + P + V WS + I
Sbjct: 303 INSNFKNQPGIIYC--FSRKNCAEVASSLNKRGIKSSEYHAQLTPDDKTKVHHMWSDNNI 360
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
+ICAT+AFGMGI+KP+VRFVIHHS+ KS+E Y+QE GRAGRDG + C+LY+ ++D +
Sbjct: 361 QVICATIAFGMGIDKPNVRFVIHHSMSKSVENYYQESGRAGRDGSPALCLLYFGFTDVFK 420
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
M+ + E+ T +NL +M+ YC + CRR L +F
Sbjct: 421 QSTMV---MTER--------------------TGLDNLNQMIKYCLDVKSCRRNLISTYF 457
Query: 770 GEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLT-----GQQFSSSHILEVFR 824
GE + S C + CD CS + + DVT + L+ ++L G + + S ++E
Sbjct: 458 GEAWSSISCHEMCDTCSGMHKYKNCDVTSACQSLISTIRLAESKGDGNRLTGSKVVEAAA 517
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
G + ++++L L K SE RIL H++ +++ E+
Sbjct: 518 G-------RGKNKSLDL----KSFTASEIQRILLHMLHMEYIRED 551
>gi|413920232|gb|AFW60164.1| hypothetical protein ZEAMMB73_604033 [Zea mays]
Length = 618
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/427 (45%), Positives = 254/427 (59%), Gaps = 43/427 (10%)
Query: 385 NKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVS 444
N +FGN FRP Q E A M D F+LMPTGGGKSL YQLPA + PG+T+V+SPL+S
Sbjct: 210 NAVIFGNKGFRPLQYEACRAAMDNQDCFILMPTGGGKSLCYQLPATLHPGVTVVVSPLLS 269
Query: 445 LIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
LIQDQI+ L + +PA FL+ + +++EL +KLLYVTPE++ + +
Sbjct: 270 LIQDQIVALTYRFAVPAAFLNSQQTSAQASAVIQELRCGKPAFKLLYVTPERIVTNYSFM 329
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
L L+ R LLAR VIDEAHCVSQWGHDFRPDY+GLG LKQ FP P++ALTATAT SV
Sbjct: 330 ETLRGLDQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCLKQNFPRVPIMALTATATESV 389
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE--------FY 615
++DV+ AL + N ++ ++SF+R NL + + Q L LLKE Y
Sbjct: 390 RKDVLGALRIPNAVVLKRSFDRLNLNYEVIGKTKTFQKQLGD----LLKERFMNESGIVY 445
Query: 616 VVSL-ECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
+S EC A F YH S+ QR VQ++W E+ +ICAT+AFGMGI+
Sbjct: 446 CLSKNECADTAKFLREKYKIKCAHYHASLAARQRTSVQEKWHSGEVKVICATIAFGMGID 505
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVRFVIH++L KSIE Y+QE GRAGRD + C++ Y DF R+ M+ G +S
Sbjct: 506 KPDVRFVIHNTLSKSIESYYQESGRAGRDELPAHCIVLYQKKDFSRIVCMLRNGENFRS- 564
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK---K 780
F VA E +M +YCE +CRR L HFGE++D C+
Sbjct: 565 -----ESFRVA---------MEQAKKMQAYCELKTECRRQALLQHFGEQYDRRRCRDGPS 610
Query: 781 TCDNCSK 787
CDNC K
Sbjct: 611 PCDNCLK 617
>gi|392553532|ref|ZP_10300669.1| ATP-dependent DNA helicase [Pseudoalteromonas spongiae UST010723-006]
Length = 607
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 228/654 (34%), Positives = 336/654 (51%), Gaps = 97/654 (14%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q ++I+A ++G D VLMPTGGGKSL YQ+PAL+ PGIT+V+SPL+SL+Q
Sbjct: 23 VFGYKQFRAGQEQVIDAVLAGQDCLVLMPTGGGKSLCYQVPALLLPGITIVVSPLISLMQ 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A +++ + EQQ I + L+ + K+LYV PE++ D R L+
Sbjct: 83 DQVAQLKAQGVAAAYINNSQSREEQQLIYQGLHQG--QIKILYVAPERLLTDDFSTR-LQ 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
LN + IDEAHCVS WGHDFRP Y LG LKQ+F + P++ALTATA + + D+
Sbjct: 140 HLN----IGLFAIDEAHCVSHWGHDFRPHYYRLGQLKQRFSHIPIMALTATADIATRNDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE-------FYVVS-- 618
V LGL N I+ SF+RPN+ E+ + L + + LKE Y S
Sbjct: 196 VMQLGLTNAHIYTGSFDRPNIRYTIEEKFKPLSQLMRF-----LKEQKGQSGIIYCSSRK 250
Query: 619 ---------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
++ G+ AA YH ++ QR+FVQ +++D+I+I+ ATVAFGMGINKP+VRF
Sbjct: 251 RVDDIAEKLVDAGYNAASYHAGLENEQRSFVQNAFARDDIHIVVATVAFGMGINKPNVRF 310
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH+ +PK+IE Y+QE GRAGRDG + ++Y+ +D RVK EQ
Sbjct: 311 VIHYDIPKNIESYYQETGRAGRDGLSAEAIMYFDPADVPRVKRFFDDIPDEQRRKVE-EQ 369
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI- 788
RFN M S+ E CRR + L +F E + K C NC
Sbjct: 370 RFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQGKPCGNCDICL 407
Query: 789 ---KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
K F D T+ A+K + V Q+F +++EV RG+ +++++H+ LS G G
Sbjct: 408 NPPKQF---DGTELAQKALSCVYRVEQKFGMGYVIEVLRGANTIRIRENQHDQLSTFGLG 464
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
K + ILR L+ L +++ +S
Sbjct: 465 KDKSVEYWLSILRQLIHHGLLHQDITQS-------------------------------- 492
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
+S +L+++ KG P N KL++ LR LR L
Sbjct: 493 ---SSLRLTEAARPVLKGDFALQLAEPRLEVKHVYKDKLARFNYDKKLFAKLRGLRKELA 549
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E V Y +F +ATL +++++P ++ E L+++G+G K++KYG + I
Sbjct: 550 D--AEDVPPYVVFSDATLAEMAQKMPTSDAEFLKVSGVGFTKLNKYGAYFMNAI 601
>gi|357441847|ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
gi|355480249|gb|AES61452.1| Bloom syndrome protein-like protein [Medicago truncatula]
Length = 603
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/430 (45%), Positives = 260/430 (60%), Gaps = 35/430 (8%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
+E N +FGN S RP Q + A ++ D F+LMPTGGGKSL YQLPA + PG+T+V+S
Sbjct: 189 IELANVVIFGNKSLRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPATLQPGVTVVVS 248
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L+ IPATFL+ ++ +L+EL D KLLYVTPE++A +
Sbjct: 249 PLLSLIQDQIITLNLKFGIPATFLNSQQNASQAAAVLQELRKDKPSCKLLYVTPERIAGN 308
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
+ L+ ++ + LA V+DEAHCVSQWGHDFRPDY+GLG LKQ FP PV+ALTATA
Sbjct: 309 QSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSLKQNFPRVPVMALTATA 368
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERL-QVGL--------SYGHFF 609
T V+ED++ AL + + I+ +SF+RPNL + K E L Q+G G +
Sbjct: 369 THPVREDILNALRIPHAIVLERSFDRPNLKYEVIVKTKEPLKQLGQLLMDRFKSQCGIVY 428
Query: 610 LLKEFYVVSL------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L + V + +C KAA+YH + QR VQK+W E++I+CAT+AFGMGI+
Sbjct: 429 CLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQKKWHDGEVHIVCATIAFGMGID 488
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
K DVRFVIH+++ KSIE Y+QE GRAGRD + C+ Y DF RV MI G
Sbjct: 489 KADVRFVIHNTMSKSIESYYQESGRAGRDNLPAVCIALYQKKDFSRVVCMIRNG------ 542
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK---K 780
G+ + +T +M YCE +CRR L HFGE FD +CK
Sbjct: 543 --QGYKK-------ESFKTAMAQAKKMQQYCELKDECRRQTLLEHFGESFDRKNCKYGSS 593
Query: 781 TCDNCSKIKS 790
CDNC K S
Sbjct: 594 PCDNCLKTAS 603
>gi|90414260|ref|ZP_01222240.1| putative ATP-dependent DNA helicase RecQ [Photobacterium profundum
3TCK]
gi|90324707|gb|EAS41248.1| putative ATP-dependent DNA helicase RecQ [Photobacterium profundum
3TCK]
Length = 615
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 228/652 (34%), Positives = 343/652 (52%), Gaps = 85/652 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+E+I A + G D V+MPTGGGKSL YQ+PALI PGITLVISPL+SL
Sbjct: 22 QDVFGYQSFRIGQQEVIEAVIEGQDCLVIMPTGGGKSLCYQIPALIMPGITLVISPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ M E E + KL+YV+PE+V D + R
Sbjct: 82 MKDQVDQLNANGVAAAYINSTMSREEVMETFLAMREG--DLKLVYVSPERVLMRDFIERL 139
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E+ L+ + +DEAHCVSQWGHDFRP+Y LG LKQ F N P++ALTATA + +
Sbjct: 140 YETP-----LSMVAVDEAHCVSQWGHDFRPEYAALGTLKQHFENLPIMALTATADDTTRN 194
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D+ LGL N + SF+RPN+ + EK R Q G+ Y + E
Sbjct: 195 DITSRLGLTNPHAYLGSFDRPNIRYTLLEKHKPMTQLTRYLTGVRGQCGIVYCNSRKRVE 254
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L + G +AA YH +D +R VQ+ + +D+I+I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 QIAEKLRDSGVRAAAYHAGLDHDERGRVQESFQRDDIHIVVATVAFGMGINKPNVRFVVH 314
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +P++IE Y+QE GRAGRDG + V++Y SD ++ + +
Sbjct: 315 YDIPRNIESYYQETGRAGRDGLPAEAVMFYDPSDLAWLRRCLDE---------------- 358
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE + ++ C NC
Sbjct: 359 -KEDGAQKQVESHKLNAMGAFAEAQT-CRRQVLLNYFGE-----YREEPCGNCDICLDPP 411
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F + + A+K + V Q F +++EV RG NQ +++H H+ L+ +G G+
Sbjct: 412 KRF---NAIEVAQKALSCVYRVNQSFGVGYVVEVLRGMQNQRIREHGHDKLTTYGIGREH 468
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ILR L+ FL + + + SS L++ + KA +++ + L P
Sbjct: 469 SHEYWVSILRQLIHRGFLTQNILR-------SSTLQLTE-KARSVLRAEIELELAVPRLD 520
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD K++ D KL++ LR LR + E
Sbjct: 521 VAARSAKSD-----------KMANRHYDK--------------KLFAKLRKLRKAIADE- 554
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +A+L +++ +P ++ E+L ING+G K+ KYG L IE
Sbjct: 555 -EDLPPYVVFNDASLMEMAEILPTSQGEMLAINGVGHRKLEKYGSVFLGVIE 605
>gi|449471881|ref|XP_004175079.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein homolog
[Taeniopygia guttata]
Length = 1069
Score = 363 bits (931), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 208/473 (43%), Positives = 277/473 (58%), Gaps = 40/473 (8%)
Query: 344 SYPVEREPFIPKIIKVN---YIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQRE 400
S P +P +P K + + +++ FP + ++ + FG H FR NQ E
Sbjct: 343 SSPAAPKPGLPMATKSHPDPVVHNPALERFRGMKFPHSAEMMNIFHRKFGLHCFRTNQLE 402
Query: 401 IINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPA 460
INA + G D F+LMPTGGGKSL YQLPA + G+T+VISPL SLI DQ+ L +I A
Sbjct: 403 AINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTIVISPLRSLIIDQVQKLKTLDIAA 462
Query: 461 TFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVI 520
T+L+G+ + +I +L+ KLLYVTPEKV S+ L+ LE+L R+LLAR VI
Sbjct: 463 TYLTGDRTDADASKIYMQLSKKDPVIKLLYVTPEKVCASNRLMSTLENLYDRKLLARFVI 522
Query: 521 DEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFR 580
DEAHCVSQWGHDFR DY+ L +L++KF + P++ALTATA V++D++ L ++ +F
Sbjct: 523 DEAHCVSQWGHDFRQDYKRLNMLRRKFGSVPMMALTATANPRVQKDILNQLEMLKPQVFT 582
Query: 581 QSFNRPNLWMDC-----EKVAERLQVGLSYGHFFLLKEFYVVSL-ECGHKAAF------- 627
SFNR NL D +KVA + H Y +S EC AA
Sbjct: 583 MSFNRHNLKYDVLPKKPKKVALDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLA 642
Query: 628 ---YHGSIDPAQRAFVQKQWSKDE-INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYH 683
YH + + R VQ++W E +ICAT+AFGMGI+KPDVR+VIH SLPKSIEGY+
Sbjct: 643 ALAYHAGLTDSNRDLVQQKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYY 702
Query: 684 QECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETN 743
QE GRAGRDG+ S C+L+YSYSD R++ +I S H R +T+
Sbjct: 703 QESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNS-----HTR----------QTH 747
Query: 744 TENLLRMVSYCENDVDCRRLLQLVHFGE-KFDSAHCKK----TCDNCSKIKSF 791
NL MV YCEN V+CRR+ L +FGE F+ CK CDNCS+ K +
Sbjct: 748 FNNLYSMVHYCENVVECRRVQLLAYFGETNFNPTFCKDHPEVICDNCSRKKDY 800
>gi|356533550|ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
1-like [Glycine max]
Length = 612
Score = 362 bits (930), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 194/427 (45%), Positives = 260/427 (60%), Gaps = 35/427 (8%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
+E N +FGN +FRP Q + A ++ D F+LMPTGGGKSL YQLPA + PG+T+V+S
Sbjct: 198 IELANVVIFGNRTFRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPATLQPGVTVVVS 257
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L+ IP+TFL+ ++ +L+EL D KLLYVTPE++A +
Sbjct: 258 PLLSLIQDQIITLNLKFGIPSTFLNSQQTASQVTAVLQELRKDKPSCKLLYVTPERIAGN 317
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L L+ ++ + LA V+DEAHCVSQWGHDFRPDY+GLG LK FP+ PV+ALTATA
Sbjct: 318 QSFLEILKFMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSLKLHFPDVPVMALTATA 377
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERL-QVGL--------SYGHFF 609
T +V+ED+++AL + + ++ +SF+RPNL + K E L Q+G G +
Sbjct: 378 THAVREDILKALRIPHALVLERSFDRPNLKYEVIAKTKEPLKQLGQLLIDRFRNQCGIVY 437
Query: 610 LLKEFYVVSL------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L + V + +C K +YH + QR VQK+W E++I+CAT+AFGMGI+
Sbjct: 438 CLSKSECVEVSKFLNEKCKIKTVYYHAGLAARQRVAVQKKWYDGEVHIVCATIAFGMGID 497
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVRFVIH+++ KSIE Y+QE GRAGRD S C+ Y DF RV MI G
Sbjct: 498 KPDVRFVIHNTMSKSIESYYQESGRAGRDNFPSVCIALYQKKDFSRVVCMIRNG------ 551
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK---K 780
G+ + +T +M YCE +CRR L HFGE FD CK
Sbjct: 552 --QGYKK-------ESFKTAMAQAKKMQEYCEIKAECRRQTLLKHFGESFDRKDCKYGSS 602
Query: 781 TCDNCSK 787
CDNC K
Sbjct: 603 PCDNCLK 609
>gi|443309958|ref|ZP_21039633.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
gi|442780011|gb|ELR90229.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
Length = 724
Score = 362 bits (930), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 233/671 (34%), Positives = 361/671 (53%), Gaps = 79/671 (11%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
P + LE+ KK FG SFR Q++II ++ D+ V+MPTGGGKSL +QLPAL+ G
Sbjct: 1 MPQLQPLESTLKKYFGYTSFRLGQQQIIEQALNNQDLLVVMPTGGGKSLCFQLPALLRKG 60
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPE 494
+T+V+SPL++L+QDQ+ L I ATFL+ + T Q RE K KLLYV PE
Sbjct: 61 LTVVVSPLIALMQDQVQSLRNNGIGATFLNSTL--TTYQVRSREEAILSGKVKLLYVAPE 118
Query: 495 KVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLA 554
++ SD L ++ + + +A IDEAHCVS+WGHDFRPDY+ L L+Q++PN P +A
Sbjct: 119 RLL-SDRFLPFIDLVQHQIGIASFAIDEAHCVSEWGHDFRPDYRQLRALRQRYPNVPTIA 177
Query: 555 LTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERLQVGLSYG 606
LTATAT V+ D++Q L L II SFNRPNL+ D + ++ + + G
Sbjct: 178 LTATATDRVRSDIIQQLNLTKPIIHVASFNRPNLYYDVQPKQKQAYNQLKQLVTKHEGAG 237
Query: 607 HFFLLKEFYV--VSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
+ L V ++++ G A YH + A+R Q ++ +D+ ++ ATVAFGMG
Sbjct: 238 IIYCLSRRKVDDITMKLQQDGISALPYHAGLSDAERESNQTRFIRDDARLMVATVAFGMG 297
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ--GVA 719
INKPDVRFVIH+ LP++IE Y+QE GRAGRDG + C +++ Y D V+++I Q V
Sbjct: 298 INKPDVRFVIHYDLPRNIESYYQESGRAGRDGGAARCTIFFGYGDVKTVEYLIDQKTDVQ 357
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
EQ + L +++ Y + V CRR +QL +FGE F
Sbjct: 358 EQ-------------------RIAKQQLRQIIDYAQGTV-CRRTIQLGYFGESFAGNCGN 397
Query: 780 KTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETL 839
K E+D T A K + V ++F SHI++V RGS +Q V ++ H+ L
Sbjct: 398 CDNCCNPK----PEQDWTIEAMKFLSCVARCQERFGMSHIIDVLRGSRSQKVLQYNHDKL 453
Query: 840 SLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQN 899
+ +G GK + + R L+ + L + +D Y SVL++N + + ++ +++
Sbjct: 454 TTYGIGKDRTADDWRLLGRSLLHQGLLGQ---TTDGY----SVLRLN-ALSWEVMRRKKS 505
Query: 900 VVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRM 959
V+L ++PA K R +TP E+ LY LR
Sbjct: 506 VLL--------------AISPAP------KPVEDRKETPKAADIEM-------LYQKLRA 538
Query: 960 LRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
LR L E +G+ Y +F +++L+ +++ P+T E +++G+G +K+++YG + I
Sbjct: 539 LRKQLADE--QGIAPYIVFADSSLKMMAQVQPQTLAEFSKVSGVGSSKLAQYGEHFVAEI 596
Query: 1020 ESTIKEFYKTD 1030
+ ++ K +
Sbjct: 597 TTYTQQSVKVE 607
>gi|291614340|ref|YP_003524497.1| ATP-dependent DNA helicase RecQ [Sideroxydans lithotrophicus ES-1]
gi|291584452|gb|ADE12110.1| ATP-dependent DNA helicase RecQ [Sideroxydans lithotrophicus ES-1]
Length = 614
Score = 362 bits (929), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 235/650 (36%), Positives = 353/650 (54%), Gaps = 69/650 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG SFR Q+ I+ ++G D VLMPTGGGKSL YQ+PAL+ G+ +++SPL++L
Sbjct: 11 RDTFGYASFRGAQQAIVEHVVAGGDALVLMPTGGGKSLCYQIPALMRKGVGIIVSPLIAL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A FL+ ++E E +E+ R+L C+ KLLYV PE++ ++ L
Sbjct: 71 MQDQVDALKQLGVSAAFLNSSLEAEEAREVSRQLMR--CELKLLYVAPERLL-TEGFLNL 127
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE LN +A IDEAHCVSQWGHDFRP+Y+GL +L ++FP+ P +ALTATA A +
Sbjct: 128 LERLNQDNNIALFAIDEAHCVSQWGHDFRPEYRGLTVLHERFPSVPRIALTATADAPTRS 187
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDC---EKVAERLQVGLSYGHFFLLKEFYVVSL--- 619
+VV+ L L F SF+RPN+ + ++LQ L H Y +S
Sbjct: 188 EVVERLSLEQAEQFVSSFDRPNIRYRVTLKDNARKQLQDFLETEHPDDAGIVYCLSRKKV 247
Query: 620 --------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
E G A YH +D A R+ QK++ ++E I+ ATVAFGMGI+KP+VRFV
Sbjct: 248 EETAAWLKEQGWDALPYHAGLDAAVRSKNQKKFLREEGVIMVATVAFGMGIDKPNVRFVA 307
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKS+EGY+QE GRAGRDG ++ + Y D + ++ M+ G A + R
Sbjct: 308 HLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVSMRQMLLSGDAPEE-----RKRV 362
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIKS 790
+ + L ++ +CE+ CR L +FGE+ C + CDNC S + +
Sbjct: 363 EL-----------QKLDALLGFCESTA-CRHQTILRYFGEE-HPGDCNE-CDNCLSPVDT 408
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
+ D T A+ + + TGQ+F H+++V G V++ H+ LS G GK LA+
Sbjct: 409 W---DATKAAQMALSCIYRTGQRFGVVHLIDVLLGKTTPKVEQFNHQQLSTFGIGKELAQ 465
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
+ S + R LV F+ +++ YG + A ++ G Q V LR +
Sbjct: 466 QQWSSVYRQLVAAGFINVDIEG---YGGLQLA-----EAARPVLRGEQEVWLRRDAEPAK 517
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
K S ++ +GS L + + ND P L+ +L+ RT L +E +
Sbjct: 518 RKSSMAE----RGSRLREAFAGA-NDDP--------------LWLALKAKRTELARE--Q 556
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
GV Y IF ++TL + R P+T +E+ I+G+G+AK++KYG L +E
Sbjct: 557 GVPPYVIFHDSTLLEILNRKPQTLDEMGRISGVGQAKLAKYGDAFLLVVE 606
>gi|428771662|ref|YP_007163452.1| ATP-dependent DNA helicase RecQ [Cyanobacterium aponinum PCC 10605]
gi|428685941|gb|AFZ55408.1| ATP-dependent DNA helicase RecQ [Cyanobacterium aponinum PCC 10605]
Length = 707
Score = 362 bits (929), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 240/649 (36%), Positives = 354/649 (54%), Gaps = 79/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFR Q EII ++ D+ ++MPTGGGKSL +QLPAL+ G+T+VISPL+SL
Sbjct: 9 KKYFGYDSFREGQEEIIQNALNNRDLLIIMPTGGGKSLCFQLPALLKKGVTIVISPLISL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA--KSDVLL 503
+QDQ+M L I ATF++ +++ E + RE K KLLY+ PE++ K L
Sbjct: 69 MQDQVMSLHDNGIGATFINSTLDFQEIKH--REQLILSGKIKLLYLAPERLISEKFQSFL 126
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
+ NA +A IDEAHC+S+WGHDFR +Y+ L L+Q+FP P+ ALTATAT V
Sbjct: 127 NTVAKTNA---IASFAIDEAHCISEWGHDFRLEYRQLRQLRQRFPQIPITALTATATPRV 183
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAER-----LQV-------GLSYGHFFLL 611
++D++Q L L N II R SFNRPNL+ + +R LQ+ G+ Y
Sbjct: 184 QQDIIQQLRLRNPIIRRFSFNRPNLYYEVRPREKRNYHQILQLINSLEGSGIIYCLARKT 243
Query: 612 KEFYVVSLECGHKAAF-YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L + +A YHG + R+ Q + +D+ I+ ATVAFGMGINKPDVRFV
Sbjct: 244 TEDLAYRLRQDNISALPYHGGLTDEMRSHHQDCFIRDDARIMVATVAFGMGINKPDVRFV 303
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
IHH LP++IE Y+QE GRAGRDG+ + C+L Y+ SD ++ + I Q
Sbjct: 304 IHHDLPRNIESYYQESGRAGRDGEPAKCILLYNPSDEYKINYFIKQ-----------KEN 352
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
N R E L ++ Y E + CRR++QL +FGEK+ C CDNC K
Sbjct: 353 INEQKQAR------EQLKKVQEYAETNY-CRRIVQLGYFGEKY-KGDC-GGCDNCLNPKK 403
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F+ D T A+K + V T ++F +HI+ + RG+ NQ + ++ H LS +G GK
Sbjct: 404 FV--DWTIEAQKFLSCVARTREKFGMNHIINILRGAKNQKIYQYGHHLLSTYGIGKDHTT 461
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
E + R LV + + + +D Y +LK+N +++ ++ ++ V + A+N+
Sbjct: 462 KEWQYLGRSLVYQGLVSQS---NDGY----KILKLN-NESWKILQHKRKVKI----ALNN 509
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ + S D P + + E+ L S L+ LR L E E
Sbjct: 510 EQNNNSQDL----------------DNPRKLETEI-------LLSRLKKLRKKLADE--E 544
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y IFG++TL+ +++ P + E L +I+G+ + K++KYG L I
Sbjct: 545 NIAPYVIFGDSTLKVMAQLQPISLESLSKISGVTEYKLNKYGNYFLREI 593
>gi|435850506|ref|YP_007312092.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica DSM
15978]
gi|433661136|gb|AGB48562.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica DSM
15978]
Length = 692
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 226/663 (34%), Positives = 357/663 (53%), Gaps = 64/663 (9%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+K FG +FRP Q +II ++G DVFVLMPTGGGKS+ YQLPAL+ G+T+V+SPL+SL
Sbjct: 6 RKYFGYDTFRPLQEDIIKDVIAGKDVFVLMPTGGGKSICYQLPALLMNGVTVVVSPLISL 65
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +L+ + + E +I +EL ++ KLLYV PE++ S
Sbjct: 66 MKDQVDTLRANGVEAAYLNSTLSYKESNQIKQELENNII--KLLYVAPERLTLS-----S 118
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+L R + IDE+HC+S+WGHDFRP+Y+ L ILK+K+P+ P++ALTATAT V++
Sbjct: 119 TLTLLDRIKVNLFAIDESHCISEWGHDFRPEYRKLSILKRKYPHIPIIALTATATPKVRK 178
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDC-------EKVAERL-----QVGLSYGHFF-LLK 612
D + L + +C + SFNR NL E++ E L + G+ Y +
Sbjct: 179 DTISQLHIEDCNTYVASFNRKNLLYQVRPKKETYEQIVEFLRKRKDKSGIIYCQSRKTVD 238
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E + G A YH + A R+ Q + KD+ II AT+AFGMGI+KP+VRFVIH
Sbjct: 239 ELTGKLRKSGFNALPYHAGLSDAARSRNQDIFIKDDAEIIVATIAFGMGIDKPNVRFVIH 298
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LP+++E Y+QE GR GRDG C+L++S D ++ + I Q
Sbjct: 299 YDLPRNLESYYQETGRGGRDGLECECILFFSRGDKYKIDYFIDQ---------------- 342
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+A S E L ++ YC++ + CRR + L +FGE+ +C CD C ++
Sbjct: 343 IAKSEE-REAARLKLKEVMDYCQSTI-CRRKMLLRYFGEELQEENC-GGCDVC--LQPVK 397
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T+ AK L+ VK Q++ +H+ E+ GS ++ + + H LS +G G +L K
Sbjct: 398 ITDATEEAKLLIRCVKEVSQRYGITHVTEILTGSNSKKITEKGHHRLSSYGTGTYLPKDR 457
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV-----------V 901
+ I R L + L E GS +LK+++ + +I G++ V +
Sbjct: 458 WADIARELAHQGILRLE-------GSRYPLLKLDKD-SEQVIAGKRTVEMIQLASSNDSL 509
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
L I + +L K + + L ++ + ++ Q + +L+S L+ LR
Sbjct: 510 LALGKQIATDQLKKPKASDHQSDL--ARVKEIETEYITKKQTGTVNRIDNELFSRLKELR 567
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ + EGV Y +F + +L+ ++ ++P E+ELLEI G+G+ K+ KYG L I
Sbjct: 568 KKIA--SKEGVPPYIVFADTSLKQMATQMPLNEKELLEITGVGEYKLQKYGDMFLTEIRD 625
Query: 1022 TIK 1024
+K
Sbjct: 626 HLK 628
>gi|254291619|ref|ZP_04962408.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae AM-19226]
gi|150422476|gb|EDN14434.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae AM-19226]
Length = 620
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 231/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ E+ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----EEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|54310561|ref|YP_131581.1| ATP-dependent DNA helicase RecQ [Photobacterium profundum SS9]
gi|46915004|emb|CAG21779.1| putative ATP-dependent DNA helicase RecQ [Photobacterium profundum
SS9]
Length = 615
Score = 362 bits (929), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 228/652 (34%), Positives = 343/652 (52%), Gaps = 85/652 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+E+I A + G D V+MPTGGGKSL YQ+PALI PGITLVISPL+SL
Sbjct: 22 QDVFGYQSFRIGQQEVIEAVVEGQDCLVIMPTGGGKSLCYQIPALIMPGITLVISPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ M E E + KL+YV+PE+V D + R
Sbjct: 82 MKDQVDQLNANGVAAAYINSTMSREEVMETFLAMREG--DLKLVYVSPERVLMRDFIERL 139
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E+ L+ + +DEAHCVSQWGHDFRP+Y LG LKQ F N P++ALTATA + +
Sbjct: 140 YETP-----LSMVAVDEAHCVSQWGHDFRPEYAALGTLKQHFENLPIMALTATADDTTRN 194
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D+ LGL N + SF+RPN+ + EK R Q G+ Y + E
Sbjct: 195 DITSRLGLTNPHDYLGSFDRPNIRYTLLEKHKPMTQLTRYLTGVRGQCGIVYCNSRKRVE 254
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L + G +AA YH +D +R VQ+ + +D+I+I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 QIAGKLRDSGVRAAAYHAGLDHDERGRVQESFQRDDIHIVVATVAFGMGINKPNVRFVVH 314
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +P++IE Y+QE GRAGRDG + V++Y SD ++ + +
Sbjct: 315 YDIPRNIESYYQETGRAGRDGLPAEAVMFYDPSDLAWLRRCLDE---------------- 358
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE + ++ C NC
Sbjct: 359 -KEEGAQKQVESHKLNAMGAFAEAQT-CRRQVLLNYFGE-----YREEPCGNCDICLDPP 411
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F + + A+K + V Q F +++EV RG NQ +++H H+ L+ +G G+
Sbjct: 412 KRF---NAIEVAQKALSCVYRVNQSFGVGYVVEVLRGMQNQRIREHGHDKLTTYGIGREH 468
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ILR L+ FL + + + SS L++ + KA +++ + L P
Sbjct: 469 SHEYWVSILRQLIHRGFLTQNILR-------SSTLQLTE-KARSVLRAEIELELAVPRLD 520
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD K++ D KL++ LR LR + E
Sbjct: 521 VAARSAKSD-----------KMANRHYDK--------------KLFAKLRKLRKAIADE- 554
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +A+L +++ +P ++ E+L ING+G K+ KYG L IE
Sbjct: 555 -EDLPPYVVFNDASLMEMAEILPTSQGEMLAINGVGHRKLEKYGSVFLGVIE 605
>gi|50288805|ref|XP_446832.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526141|emb|CAG59763.1| unnamed protein product [Candida glabrata]
Length = 718
Score = 362 bits (928), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 201/518 (38%), Positives = 297/518 (57%), Gaps = 46/518 (8%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC--- 432
PW K+++ K F FR +Q +IIN+T+ G VFVLM TGGGKSL YQLP+L+
Sbjct: 83 PWDKQVQNILKCTFHMEQFRGSQIDIINSTLQGKHVFVLMCTGGGKSLCYQLPSLVTLGY 142
Query: 433 -PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYV 491
G T+VISPL+SL+ DQ+ L+ I A LS ++ L+ L+ K L Y+
Sbjct: 143 TKGTTIVISPLISLMHDQVEALISKRIKACMLSSTSSSKQKTMALQLLSEG--KLNLFYI 200
Query: 492 TPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTP 551
+PE V S + L + LAR+VIDEAHC+S WGHDFRP+Y+ LG L ++F P
Sbjct: 201 SPEMVMGSSPCKGIIRRLYRQNRLARLVIDEAHCISSWGHDFRPEYKKLGQLTKEFDGVP 260
Query: 552 VLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLL 611
V+ALTATA +++ED+++ L L N ++F+ S NR NL+ + V ++ + Y + L
Sbjct: 261 VMALTATANDNIQEDILKILNLKNVVVFKDSLNRKNLYYE---VVQKNSRTIEYMTYLLK 317
Query: 612 KEFYVVS--LECGHKAA----------------FYHGSIDPAQRAFVQKQWSKDEINIIC 653
EF+ S + C KA+ FYH R Q++W + I ++C
Sbjct: 318 TEFHGQSGIIYCNSKASCEKVSKELNQANISSEFYHAGKTANSRLNTQRKWQQGTIQVVC 377
Query: 654 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHM 713
AT+AFGMGI+K +VRFV H+ +P+S+EGY+QE GRAGRDG S C+L++ D R++ +
Sbjct: 378 ATIAFGMGIDKENVRFVFHYDIPRSMEGYYQETGRAGRDGNPSKCILFFCLQDVNRLQIL 437
Query: 714 ISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF 773
I R NV+ + E N + L ++ YC N VDCRRL L +F E+F
Sbjct: 438 I--------------QRENVSALQK--EHNLKKLQDVLVYCHNKVDCRRLQILEYFNEEF 481
Query: 774 DSAHCKKTCDNCSKI--KSFIEKDVTDTAKKLVELV-KLTGQQFSSSHILEVFRGSLNQY 830
++C KTCDNC I + +KD T AK+++ L+ KL ++ +++ ++FRGS N
Sbjct: 482 FPSNCMKTCDNCKNIGVSTIEQKDFTHYAKQILSLLRKLGNERITTNQCQDIFRGSNNMK 541
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
+ ++ HG+GK L KSE R+ HL+ ++ E
Sbjct: 542 TRFSGYDNFEEHGSGKDLTKSETDRLFVHLLKTGYVCE 579
>gi|424658095|ref|ZP_18095363.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-16]
gi|408056663|gb|EKG91539.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-16]
Length = 611
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 22 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 139 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 195 IMQRLQLNEPQQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKL-CGNHIRAASYHAGMDTDERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 360 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 411 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 468 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 520 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|424589454|ref|ZP_18028911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1037(10)]
gi|408037483|gb|EKG73878.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1037(10)]
Length = 611
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 22 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 139 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 360 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 411 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 468 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 520 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|161582034|ref|NP_229853.2| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|379740087|ref|YP_005332056.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae IEC224]
gi|417811271|ref|ZP_12457937.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-49A2]
gi|417815025|ref|ZP_12461666.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HCUF01]
gi|417822345|ref|ZP_12468945.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE48]
gi|418330899|ref|ZP_12941859.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-06A1]
gi|418335866|ref|ZP_12944769.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-23A1]
gi|418342438|ref|ZP_12949250.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-28A1]
gi|418347611|ref|ZP_12952349.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43A1]
gi|418353167|ref|ZP_12955894.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A1]
gi|419824659|ref|ZP_14348170.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1033(6)]
gi|421315437|ref|ZP_15766011.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1032(5)]
gi|421318988|ref|ZP_15769550.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1038(11)]
gi|421323026|ref|ZP_15773559.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1041(14)]
gi|421326494|ref|ZP_15777013.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1042(15)]
gi|421330426|ref|ZP_15780911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1046(19)]
gi|421334020|ref|ZP_15784493.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1048(21)]
gi|421337925|ref|ZP_15788367.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-20A2]
gi|421345358|ref|ZP_15795746.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46A1]
gi|421350031|ref|ZP_15800399.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-25]
gi|422890228|ref|ZP_16932668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-40A1]
gi|422901023|ref|ZP_16936417.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48A1]
gi|422905194|ref|ZP_16940063.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-70A1]
gi|422911938|ref|ZP_16946476.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HFU-02]
gi|422921444|ref|ZP_16954674.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BJG-01]
gi|422924406|ref|ZP_16957463.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-38A1]
gi|423143466|ref|ZP_17131092.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-19A1]
gi|423148448|ref|ZP_17135818.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-21A1]
gi|423152234|ref|ZP_17139456.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-22A1]
gi|423155026|ref|ZP_17142169.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-32A1]
gi|423158891|ref|ZP_17145869.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-33A2]
gi|423163555|ref|ZP_17150362.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48B2]
gi|423729565|ref|ZP_17702898.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A1]
gi|423745963|ref|ZP_17711086.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A2]
gi|423890179|ref|ZP_17725115.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62A1]
gi|423924715|ref|ZP_17729728.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-77A1]
gi|424000739|ref|ZP_17743841.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A2]
gi|424004900|ref|ZP_17747897.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-37A1]
gi|424022697|ref|ZP_17762372.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62B1]
gi|424025715|ref|ZP_17765344.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-69A1]
gi|424585089|ref|ZP_18024695.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1030(3)]
gi|424593717|ref|ZP_18033068.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1040(13)]
gi|424597647|ref|ZP_18036858.1| ATP-dependent DNA helicase RecQ [Vibrio Cholerae CP1044(17)]
gi|424600419|ref|ZP_18039587.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1047(20)]
gi|424605327|ref|ZP_18044303.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1050(23)]
gi|424609045|ref|ZP_18047916.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-39A1]
gi|424611960|ref|ZP_18050779.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41A1]
gi|424615844|ref|ZP_18054548.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-42A1]
gi|424620598|ref|ZP_18059135.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-47A1]
gi|424643415|ref|ZP_18081182.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A2]
gi|424651343|ref|ZP_18088878.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A2]
gi|424655296|ref|ZP_18092607.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A2]
gi|443502247|ref|ZP_21069249.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-64A1]
gi|443506147|ref|ZP_21072955.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-65A1]
gi|443509985|ref|ZP_21076668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-67A1]
gi|443513827|ref|ZP_21080381.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-68A1]
gi|443517631|ref|ZP_21084066.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-71A1]
gi|443522220|ref|ZP_21088479.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-72A2]
gi|443529152|ref|ZP_21095173.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-7A1]
gi|443533890|ref|ZP_21099822.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-80A1]
gi|443540108|ref|ZP_21105959.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A1]
gi|340045414|gb|EGR06357.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HCUF01]
gi|340045971|gb|EGR06907.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-49A2]
gi|340049588|gb|EGR10502.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE48]
gi|341626483|gb|EGS51872.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-70A1]
gi|341628175|gb|EGS53450.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48A1]
gi|341628480|gb|EGS53726.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-40A1]
gi|341641806|gb|EGS66325.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HFU-02]
gi|341648893|gb|EGS72908.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BJG-01]
gi|341649090|gb|EGS73091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-38A1]
gi|356422714|gb|EHH76185.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-06A1]
gi|356423432|gb|EHH76883.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-21A1]
gi|356427543|gb|EHH80791.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-19A1]
gi|356434248|gb|EHH87429.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-23A1]
gi|356435779|gb|EHH88928.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-22A1]
gi|356438558|gb|EHH91573.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-28A1]
gi|356444285|gb|EHH97096.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-32A1]
gi|356448332|gb|EHI01104.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43A1]
gi|356451141|gb|EHI03843.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-33A2]
gi|356455360|gb|EHI08003.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A1]
gi|356456752|gb|EHI09337.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48B2]
gi|378793597|gb|AFC57068.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae IEC224]
gi|395922926|gb|EJH33739.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1032(5)]
gi|395924346|gb|EJH35149.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1041(14)]
gi|395926264|gb|EJH37052.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1038(11)]
gi|395934825|gb|EJH45562.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1042(15)]
gi|395936113|gb|EJH46842.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1046(19)]
gi|395938083|gb|EJH48781.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1048(21)]
gi|395947099|gb|EJH57756.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-20A2]
gi|395948728|gb|EJH59366.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46A1]
gi|395955138|gb|EJH65741.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-25]
gi|395964752|gb|EJH74949.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A2]
gi|395964962|gb|EJH75150.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A2]
gi|395967722|gb|EJH77772.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-42A1]
gi|395976765|gb|EJH86206.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-47A1]
gi|395979404|gb|EJH88755.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1030(3)]
gi|395979993|gb|EJH89302.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1047(20)]
gi|408011183|gb|EKG49013.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-39A1]
gi|408018033|gb|EKG55503.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41A1]
gi|408038249|gb|EKG74601.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1040(13)]
gi|408045701|gb|EKG81507.1| ATP-dependent DNA helicase RecQ [Vibrio Cholerae CP1044(17)]
gi|408047549|gb|EKG83162.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1050(23)]
gi|408058109|gb|EKG92929.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A2]
gi|408612488|gb|EKK85827.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1033(6)]
gi|408628389|gb|EKL01142.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A1]
gi|408644451|gb|EKL16136.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A2]
gi|408659856|gb|EKL30889.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-77A1]
gi|408660756|gb|EKL31758.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62A1]
gi|408850061|gb|EKL90047.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-37A1]
gi|408850390|gb|EKL90354.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A2]
gi|408875954|gb|EKM15091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62B1]
gi|408882282|gb|EKM21122.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-69A1]
gi|443433407|gb|ELS75915.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-64A1]
gi|443437237|gb|ELS83336.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-65A1]
gi|443441070|gb|ELS90740.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-67A1]
gi|443444882|gb|ELS98141.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-68A1]
gi|443448736|gb|ELT05353.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-71A1]
gi|443451781|gb|ELT12026.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-72A2]
gi|443459995|gb|ELT27385.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-7A1]
gi|443462939|gb|ELT33958.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-80A1]
gi|443464395|gb|ELT39058.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A1]
Length = 611
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 22 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 139 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 360 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 411 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 468 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 520 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|261335969|emb|CBH09254.1| putative RecQ Helicase [Heliconius melpomene]
Length = 632
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/542 (37%), Positives = 282/542 (52%), Gaps = 67/542 (12%)
Query: 373 WD---FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WD + W+ K++ K VF +FRP Q INAT+SG V+MPTG GKSL YQLPA
Sbjct: 58 WDGNVYEWSDKVKKTLKDVFKIEAFRPKQLSAINATLSGQHTIVVMPTGAGKSLCYQLPA 117
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
++ PG+T+VISPLVSL++DQ+ L +IPA ++ E L L K KLL
Sbjct: 118 IVKPGLTIVISPLVSLMEDQVRSLKNKDIPAMLMTSTSSKEETSTALNALKDKTTKIKLL 177
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE++AKS + L+ A L RI IDE HC SQWGHDFRPDY+ LGIL FPN
Sbjct: 178 YVTPERLAKSKRFMANLQKCFAEGRLQRIAIDEVHCCSQWGHDFRPDYKYLGILTNMFPN 237
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM----------DCEKVAERL 599
P+L LTATATA V DV + L + C++ + +FNRPNL+ DC + E+L
Sbjct: 238 IPILGLTATATAHVLSDVQKMLSIQGCLVIKSTFNRPNLYYKILEKPTSQEDCLSILEKL 297
Query: 600 -------QVGLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ G+ Y + E L+ G + +YH +++ R+ V +W E
Sbjct: 298 LKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHATMEAKSRSDVHMKWHAKEYQA 357
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I ATVAFGMGI+KPDVRFVIHH++ KSIE Y+QE GRAGRDGQR+ CV Y D +V
Sbjct: 358 IVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDGQRAECVTLYRMQDIFKVS 417
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ V + ++L MV YC N CRRLL HF E
Sbjct: 418 SMVFSSVG-----------------------SMDHLYDMVKYCLNGTFCRRLLLAKHFDE 454
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV---------KLTGQQFSSSHILEV 822
+ C K CD C + + + + + + KLT Q+ + L
Sbjct: 455 DWGDTDCNKMCDVCENSNTTTREISLENHCRTISYIIENAARQDTKLTAQKLLDAWFL-- 512
Query: 823 FRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV 882
+G + L G + A++ ++ L+IE +L+E+ + Y ++S +
Sbjct: 513 -KGPV----------PLRQKGKEPNFARNIGEDVIAFLLIEGYLIEDFHYT-AYSTISYI 560
Query: 883 LK 884
K
Sbjct: 561 KK 562
>gi|358410697|gb|AEU10083.1| ATP-dependent DNA helicase RecQ [Photobacterium damselae subsp.
piscicida]
Length = 613
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 231/667 (34%), Positives = 353/667 (52%), Gaps = 85/667 (12%)
Query: 371 SSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPAL 430
S D+P + + + VFG FR Q++II ++ D V+MPTGGGKSL YQ+PAL
Sbjct: 5 SLCDYPTLAQAQTLLEDVFGYQQFRDGQQDIITTALNHSDSLVIMPTGGGKSLCYQIPAL 64
Query: 431 ICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
+ G+TLVISPL+SL++DQ+ L+ IPA + + E + + +L S + KLLY
Sbjct: 65 LLDGLTLVISPLISLMKDQVDQLVANGIPAACIHSALTRDEIETVFSQLESG--ELKLLY 122
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
V+PE+V D + R L+ + LA + +DEAHC+SQWGHDFRP+Y LG LKQ F
Sbjct: 123 VSPERVLMRDFIAR-LQQVK----LALLAVDEAHCISQWGHDFRPEYAELGQLKQMFAPL 177
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAER 598
PV+ALTATA + ++D++ L L I SF RPN+ + EK + R
Sbjct: 178 PVMALTATADETTRQDIISRLALEQPYIHLGSFERPNIRYTLLEKYKPLSQLLSYLASVR 237
Query: 599 LQVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
Q G+ Y + E L E G +AA YH + RA+VQ+ + +D+I+I+ ATVA
Sbjct: 238 GQCGIIYCNSRKRVEQICEKLCENGLRAAAYHAGMSVNDRAYVQEAFQRDDIHIVVATVA 297
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINKP+VRFVIHH +P++IE Y+QE GRAGRDG + VL Y +D ++ + +
Sbjct: 298 FGMGINKPNVRFVIHHDIPRNIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLDE- 356
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
+ + R +E + N +R + + CRR + L +FG+ H
Sbjct: 357 --------------KLDGATREVEEHKLNAMRDFAVAQT---CRRQVLLHYFGQ-----H 394
Query: 778 CKKTCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKK 833
+K C NC K F + T+ A+K + V Q F +HI+EV RG N ++
Sbjct: 395 SEKPCGNCDICLDPPKQF---NATEVAQKALSCVYRVQQSFGVNHIIEVLRGMQNHRIRD 451
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
H HE LS +G G + +LR L+ L++ +++ +S L++ + ++ ++
Sbjct: 452 HGHELLSTYGIGCDFSHEYWLSVLRQLIHRGLLVQNIQR-------NSTLQLTE-QSRSV 503
Query: 894 IIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKL 953
+ G ++L P + + +K D KL+ D KL
Sbjct: 504 LRGEVELMLAVPRLDTAARTAKHD-----------KLAQRHYDK--------------KL 538
Query: 954 YSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGV 1013
++ LR LR + + E + Y +F + +L +++R+P + E L ING+G+ K+ KYG
Sbjct: 539 FAKLRKLRKAIADD--ENLPPYVVFNDVSLMEMAERLPTSHGEFLAINGVGQRKLEKYGQ 596
Query: 1014 RLLETIE 1020
LE IE
Sbjct: 597 VFLELIE 603
>gi|302337379|ref|YP_003802585.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
gi|301634564|gb|ADK79991.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
Length = 601
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 228/649 (35%), Positives = 348/649 (53%), Gaps = 75/649 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SF+ NQ+E+INA ++G D+F MPTGGGKSL YQ+PAL+ G+T+V+SPL++L
Sbjct: 9 KSVFGYSSFKANQKEVINAILAGRDLFAAMPTGGGKSLCYQIPALLFDGLTVVVSPLIAL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L IPA FL+ + + E R L + KLLY++PE++A D +
Sbjct: 69 MKDQVDAALSLGIPAAFLNSSQSQEDATETYRRLYRG--EIKLLYLSPERLA-VDGFTER 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N ++ +DEAHC+S+WGHDFRPDY L L+ FP P+ A TATAT V+E
Sbjct: 126 LAAFN----VSLFAVDEAHCLSEWGHDFRPDYLALAQLRTAFPTVPIAAFTATATVRVQE 181
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL------------QVGLSYGHFFLLKE 613
D+++ L L + I R SFNR L+ E L Q G+ Y +
Sbjct: 182 DIIRLLRLEDPFILRASFNRKELFYQVLPKTEVLSQIAQYIGAHPDQSGIVYRLSRKDTD 241
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
V L + G +A YH +D +RA Q++++ D++ +I AT AFGMGI+K ++R+VIH
Sbjct: 242 KTVDYLGKLGIRALPYHAGMDKDERARNQERFNNDDVQVIVATTAFGMGIDKNNIRYVIH 301
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKS+EGY+QE GRAGRDG S C+L++ +D R+ + I Q + P +R
Sbjct: 302 GDLPKSMEGYYQETGRAGRDGLESQCILFFGTADIARLNYFIRQ---IEDPAEQRRSR-- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
ENL RM + +V CRR L +F E F+ +C +CD C+ +
Sbjct: 357 ------------ENLDRMARFASVNV-CRRKQILEYFNETFE-GNC-GSCDVCTGTTN-- 399
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
E D A+KL+ + T + F + HI+++ RG+ + ++K+ H L +G G+ +K
Sbjct: 400 EIDAGTDARKLLSAIYRTREGFGAGHIIDIVRGADTEKIRKNGHAALKTYGVGRDKSKKW 459
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS--AINS 910
I+ L+ + + + SD + +VL++ + + L+ G + + P A +S
Sbjct: 460 WMGIVTELIGQQMIF---RDSDRF----NVLRITE-EGRKLLFGNEPFFILDPGGKAESS 511
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
K + T A G+ TP+ Q L + L+ LRT L KE
Sbjct: 512 AKAPSFEQTAAGGA-----------PTPTNTQ----------LLTRLKQLRTRLAKE--H 548
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y IF + TL ++ +P T ELL I+G+G+ K++ YG L I
Sbjct: 549 HLPPYIIFSDKTLTQMAAALPETSSELLAISGVGEKKLAAYGSDFLAVI 597
>gi|262172709|ref|ZP_06040387.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus MB-451]
gi|261893785|gb|EEY39771.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus MB-451]
Length = 620
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 229/652 (35%), Positives = 354/652 (54%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I+A + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIDAALQGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLTREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
+L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SNLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNDPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D + C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----QPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKTIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|304414091|ref|ZP_07395459.1| ATP-dependent DNA helicase [Candidatus Regiella insecticola LSR1]
gi|304283305|gb|EFL91701.1| ATP-dependent DNA helicase [Candidatus Regiella insecticola LSR1]
Length = 629
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 227/654 (34%), Positives = 353/654 (53%), Gaps = 66/654 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q+EII A +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 23 RDVFGYQQFRPGQKEIIAAILSGQDCLVIMPTGGGKSLCYQIPALVMKGLTLVVSPLISL 82
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ + W +Q E++ S K KLLY+ PE++ + L+Q
Sbjct: 83 MKDQVDQLLAYGVTAACLNSSQTWQQQSEVIANCRSG--KIKLLYIAPERLVAEN-FLQQ 139
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + A + +DEAHC+SQWGHDFRP+Y+ L LK +FP+ PV+ALTATA +
Sbjct: 140 LSFFSP----ALLAVDEAHCISQWGHDFRPEYRALNQLKLRFPHLPVIALTATADEVTRA 195
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGLSYGHFFLLKE 613
D+++ L L + +I SF+RPN+ ++ K E+L + G+ Y + E
Sbjct: 196 DIIRLLNLHHPLIQINSFDRPNIRYTLIEKFKPVEQLCRLVGKQGAKSGIIYCNSRAKVE 255
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
V L+ G A YH +D RA VQ+ + +D++ I+ +TVAFGMGINKP++RFVIH
Sbjct: 256 STVARLQNRGLSVAAYHAGLDSLVRAQVQEAFQRDDLQIVVSTVAFGMGINKPNIRFVIH 315
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L Y SD + ++H + E+ P + N R
Sbjct: 316 FDIPRTIESYYQETGRAGRDGLPAEAMLLYDPSDMVWLRHCL-----EEKPVSEQQNIER 370
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E T CRRL+ L +FGE + ++C NC
Sbjct: 371 HKLNAMGAFAEAQT---------------CRRLILLNYFGE-----YRSQSCGNCDICLD 410
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
E+ D A+K++ V GQ+F +I+ + RGS +Q + H+ LS++G G+
Sbjct: 411 PPERYDGLIDAQKVLSCVYRVGQRFGVGYIVAMLRGSSHQRIHALGHDKLSVYGIGREKT 470
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ ILR L+ L + ++ + S L++ ++ A ++ ++ L P ++
Sbjct: 471 AEHWTSILRQLIHLGKLRQNIE-------MFSALQLTEA-ARPILRAEVSLSLAVPRILD 522
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
K S P K + + + + +E L++ LR LR + EA
Sbjct: 523 FKKRKNSKDQPYSSGAQGHKNATHKKYSHKKSDHE--------LFTKLRKLRKSMADEA- 573
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
V Y +F +ATL +S+++P T +EL ING+GK K+ ++G L+ I +
Sbjct: 574 -NVPPYVVFNDATLLAMSEQIPITVDELFNINGVGKIKLERFGTSFLKVIREHV 626
>gi|339243055|ref|XP_003377453.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
gi|316973743|gb|EFV57302.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
Length = 605
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 288/521 (55%), Gaps = 59/521 (11%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W + F W+ +L K +FG +SFRP Q +NA +SG DV + M TGGGKSLTYQLPA
Sbjct: 63 WETEFFSWSSELSEKLKSIFGMNSFRPLQLSAMNAILSGRDVLLTMSTGGGKSLTYQLPA 122
Query: 430 LI--CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
++ TLVISPLVSL++DQ++ L I A L + E + IL E+NS CK++
Sbjct: 123 VLGNASQFTLVISPLVSLMEDQVISLNTRGIEAVLLYQHTPPEEMKRILAEMNSPGCKFR 182
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPE++AKS + +LE LL I IDE HC SQWGHDFRPDY+ LG+L+++F
Sbjct: 183 LLYVTPERLAKSKRFMAKLEKAYQAGLLKLIAIDEVHCCSQWGHDFRPDYKFLGVLRRQF 242
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAER----LQV-- 601
P+TP+L LTATAT +V +D+ + L + + FR SFNRPNL+ ++ +R LQ+
Sbjct: 243 PDTPILGLTATATVAVLQDIKEILNIPMALEFRASFNRPNLFYQVQQKPDRPEELLQIVC 302
Query: 602 -----------GLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEI 649
G+ Y E + +L G KA YH +DP +R V ++W ++
Sbjct: 303 KLLKGQFSGQSGIIYCFSKKDSETFAQNLRTNGVKAEHYHADMDPNERGMVHRKWLSNKC 362
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
+I ATVAFGMGI+K DVR VIH +LPKS+E Y+QE GRAGRDGQ +SC+LY+ ++D R
Sbjct: 363 QVIVATVAFGMGIDKADVRVVIHLALPKSVENYYQESGRAGRDGQPASCLLYFGFADLFR 422
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
+ V N ENL +M++YC CRR HF
Sbjct: 423 LS-------------------VTVCNE----RNGLENLYKMLAYCTGLASCRRRYFADHF 459
Query: 770 GEKFDSAHCKKTCDNCSKIKSFI-EKDVTDTAKKLVELVKLTGQ-QFSSSHILEVFRGSL 827
E++ C+ CDNC + + ++DV K + ++ +G+ +F++ +++
Sbjct: 460 DEQWKPTWCQSACDNCQRPPGSVHQQDVVQQCKMALAILGASGERKFTALKLIDTL---- 515
Query: 828 NQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLME 868
S H K IL H+++E +L E
Sbjct: 516 ----------CKSEHSLKVDQCKPMLELILVHMLLEGYLKE 546
>gi|261213176|ref|ZP_05927459.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC341]
gi|260837594|gb|EEX64288.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC341]
Length = 620
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNNIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|322421607|ref|YP_004200830.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M18]
gi|320127994|gb|ADW15554.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M18]
Length = 598
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 227/648 (35%), Positives = 347/648 (53%), Gaps = 81/648 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
+FG +FRP Q+EI+ ++G D FVLMPTGGGKSL YQ+PAL PG LV+SPL+SL++
Sbjct: 12 IFGYKAFRPRQQEIVETVLAGKDAFVLMPTGGGKSLCYQVPALCLPGTALVVSPLISLMK 71
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + + A + + E + +L EL++ + KLLYV PE++ SD L +++
Sbjct: 72 DQVDALRENGVAAACYNSALGEAEARRVLAELHAG--ELKLLYVAPERLL-SDGFLERIK 128
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L ++ IDEAHCVSQWGHDFRP+Y LG+L++ FP P++ALTATA A K D+
Sbjct: 129 TLP----ISLFAIDEAHCVSQWGHDFRPEYAQLGVLREIFPQIPMIALTATADAQTKGDI 184
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFFLLKEFYVVSL 619
+ LGL + F F+RPN+ M+ K +L L+ G + L V +
Sbjct: 185 LSRLGLEDAACFFAGFDRPNIRYGVMEKNKPFNQLTAFLATRKDEAGIVYALSRKRVEEV 244
Query: 620 E---CGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
CG KAA YH + +R VQ+ + +D++ I+ ATVAFGMGI+K +VRFV+H+
Sbjct: 245 ARKLCGAGIKAAAYHAGLPDKERHQVQEAFLRDDVKIVVATVAFGMGIDKSNVRFVVHYD 304
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+PKSIE Y+QE GRAGRDG + +L + Y D + +I G E+ NR
Sbjct: 305 MPKSIESYYQETGRAGRDGLPADALLLFGYGDIAVARGLIGNGGNEE------QNR---- 354
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEK 794
+E + N MV + E CRR + L +FG++ + C NC +S E+
Sbjct: 355 -----IELHKLNC--MVGFAEAQT-CRRRVLLGYFGDRLEEG-----CGNCDICESPPER 401
Query: 795 -DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
+ T+ A+K + V GQ+F H+++V RGS NQ + +H+ LS G GKH ++
Sbjct: 402 FEATEDARKALSCVYRVGQRFGMGHVIDVLRGSQNQRILDLKHDQLSTFGIGKHHSQEVW 461
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+LR L+ +L +++ SVLK+ + A L+ G + L P +
Sbjct: 462 GSLLRQLIHLGYLEQDLAN-------FSVLKLTED-ARPLLRGEMRLELAKPRDTRVVEK 513
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
+ PA L+ LR LR + E + V
Sbjct: 514 KSAARKPA---------------------------YDGALFQELRELRKQIADE--QQVP 544
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ +F +ATL ++ ++P+ + ELL+I G+G+ K+++YG L I++
Sbjct: 545 PFVVFADATLAEMAAQMPKDKWELLKITGVGQHKLARYGDAFLRVIKA 592
>gi|121587570|ref|ZP_01677336.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 2740-80]
gi|121728001|ref|ZP_01681040.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V52]
gi|153800796|ref|ZP_01955382.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-3]
gi|153818546|ref|ZP_01971213.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae NCTC 8457]
gi|153821590|ref|ZP_01974257.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|153825932|ref|ZP_01978599.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-2]
gi|227080417|ref|YP_002808968.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae M66-2]
gi|229507002|ref|ZP_04396510.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BX 330286]
gi|229509372|ref|ZP_04398855.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|229512489|ref|ZP_04401961.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TMA 21]
gi|229516319|ref|ZP_04405767.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC9]
gi|229606510|ref|YP_002877158.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MJ-1236]
gi|254851325|ref|ZP_05240675.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MO10]
gi|255744009|ref|ZP_05417963.1| ATP-dependent DNA helicase RecQ [Vibrio cholera CIRS 101]
gi|262153632|ref|ZP_06028759.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae INDRE 91/1]
gi|360036832|ref|YP_004938595.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. 2010EL-1786]
gi|440712130|ref|ZP_20892755.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 4260B]
gi|449054605|ref|ZP_21733273.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. Inaba G4222]
gi|9654602|gb|AAF93372.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548208|gb|EAX58278.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 2740-80]
gi|121629704|gb|EAX62123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V52]
gi|124123627|gb|EAY42370.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-3]
gi|126510885|gb|EAZ73479.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae NCTC 8457]
gi|126520877|gb|EAZ78100.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|149740340|gb|EDM54476.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-2]
gi|227008305|gb|ACP04517.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae M66-2]
gi|229346745|gb|EEO11715.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC9]
gi|229350488|gb|EEO15436.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TMA 21]
gi|229353687|gb|EEO18624.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|229356107|gb|EEO21026.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BX 330286]
gi|229369165|gb|ACQ59588.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MJ-1236]
gi|254847030|gb|EET25444.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MO10]
gi|255738274|gb|EET93665.1| ATP-dependent DNA helicase RecQ [Vibrio cholera CIRS 101]
gi|262030573|gb|EEY49210.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae INDRE 91/1]
gi|356647986|gb|AET28041.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. 2010EL-1786]
gi|439972140|gb|ELP48437.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 4260B]
gi|448265751|gb|EMB02984.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. Inaba G4222]
Length = 620
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|258625868|ref|ZP_05720743.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM603]
gi|258581832|gb|EEW06706.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM603]
Length = 620
Score = 361 bits (926), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 353/652 (54%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I+A + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIDAALQGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
+L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SNLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|147673915|ref|YP_001218455.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|227116593|ref|YP_002818489.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|262167384|ref|ZP_06035092.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC27]
gi|146315798|gb|ABQ20337.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|227012043|gb|ACP08253.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|262024186|gb|EEY42879.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC27]
Length = 620
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLKEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|221505512|gb|EEE31157.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 1753
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/449 (43%), Positives = 269/449 (59%), Gaps = 29/449 (6%)
Query: 357 IKVNYIEGSNDQKWSS-WDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLM 415
++VN + + W + F W + + A N+KVFGN +FRP QR IINA +S DVFV+M
Sbjct: 706 VRVNTV----SRNWEAERGFEWDEAVRACNEKVFGNRAFRPMQRAIINAVLSQRDVFVMM 761
Query: 416 PTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEI 475
PTGGGKSL +QLPA++ G+T+V+ PLVSLI DQ+ + N+ + N W EQ+ +
Sbjct: 762 PTGGGKSLCFQLPAIVSGGVTVVVMPLVSLITDQLEQMQLLNVGCRAFAANQPWEEQKAV 821
Query: 476 LRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRP 535
EL + LL VTPEK+ S +L L LN L R IDEAHCVSQWG+DFRP
Sbjct: 822 YDELRRGTGEIHLLLVTPEKLKGSSLLRSCLHELNREGCLDRFAIDEAHCVSQWGNDFRP 881
Query: 536 DYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--- 592
DY+ L L++++PN P++ALTATAT +V +DVV L + ++F+ SF+RPNL +
Sbjct: 882 DYRQLQSLREEYPNVPLVALTATATKAVLQDVVTQLRMREPVVFQGSFDRPNLRYEVRPK 941
Query: 593 --EKVAERLQVGLSYGHFFLLKEFYVVS-LEC-----------GHKAAFYHGSIDPAQRA 638
++ E + + L Y +S EC G A FYH +D +R
Sbjct: 942 VPRRIVEDIAATIKTEFHGLSGIVYCLSRRECERVAEGLQRHAGISAGFYHAQLDAEKRE 1001
Query: 639 FVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSC 698
+Q+ W D+I +I AT+AFGMGINK DVRFVIH ++PK +E ++QE GRAGR+G+ +SC
Sbjct: 1002 EIQRDWMNDDIKVIVATLAFGMGINKRDVRFVIHCAMPKCLENFYQESGRAGRNGEEASC 1061
Query: 699 VLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDV 758
+L+Y+Y D R H+I ++ G R + R N ENLLRM++YCE +
Sbjct: 1062 ILFYNYHDKQRQSHLIQ--LSSNEAGASGARRQADGQASR----NEENLLRMLAYCEEEE 1115
Query: 759 DCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+CRR L HFGE F A C CDNC +
Sbjct: 1116 ECRRRFILRHFGEDFRGA-CTVACDNCRR 1143
>gi|440794542|gb|ELR15702.1| ATPdependent DNA helicase, RecQ subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 621
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 293/523 (56%), Gaps = 39/523 (7%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
Q W + FPW K++ K VF + FRPNQR++IN +SG D FV+MPTG GKSL YQL
Sbjct: 105 QNWEAPGFPWADKVDHVLKTVFNHEQFRPNQRKVINCVLSGRDAFVIMPTGAGKSLLYQL 164
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRE----LNSDY 483
P +I G TLVISPL+SLIQDQ+ L + + A LS + E ++L++ N+
Sbjct: 165 PGVISNGFTLVISPLLSLIQDQVSALRKKGVVAVELSSSRTPKEVSQMLKKRHWYTNAAL 224
Query: 484 CK---YKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL 540
K K L+VTPE+V KS L + LAR+VIDE HC+SQWG+DFRPD++ L
Sbjct: 225 AKDTNVKFLFVTPERVVKSTRFFAFLRQQVDQARLARVVIDECHCISQWGYDFRPDFKQL 284
Query: 541 GILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQ 600
+L+++FPN P+LALT++AT K D ++ LGL C F QSFNRPNL E ++
Sbjct: 285 LVLRKEFPNVPILALTSSATNRCKVDTMRQLGLEECDFFTQSFNRPNLRYAVENKTKKTT 344
Query: 601 VGLSY----------GHFFLLK----EFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWS 645
+ G + L E L+ +A FYH + PA+R VQ++W
Sbjct: 345 KKIIQFIKKKHNSESGIIYCLSKKECEAMARKLQAAKIQANFYHAGLSPAKREKVQRKWM 404
Query: 646 KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYS 705
E ++ AT+AFG+GI+K DVRFVIHHSLP++IE ++QE GRAGRDG + CV++Y +S
Sbjct: 405 AGEFAVMVATIAFGLGIDKADVRFVIHHSLPRTIEDFYQESGRAGRDGLNADCVVFYRHS 464
Query: 706 DFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
D R +H Q + ++ F T E + ++ ++CE+ CRR L
Sbjct: 465 D--RPRHTFMQLSSCKNAFQA--------------RTKLEKMRQLTAWCEDHTRCRRELL 508
Query: 766 LVHFGEKF-DSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFR 824
L +FGE F A C CDNC + D A+ +V +V G + + ++++ V R
Sbjct: 509 LEYFGEAFTGGACCNGMCDNCLFGARAVALDWCRQAQAVVRIVGSLGDKATMANVVSVVR 568
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLM 867
G VK + +L GA ++ R+++ + + +FL+
Sbjct: 569 GCTTPTVKANGWHSLPDFGADTSASELACRRLVQWMTLNNFLL 611
>gi|429888125|ref|ZP_19369618.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae PS15]
gi|429224784|gb|EKY31102.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae PS15]
Length = 620
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 351/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLTREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAGKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|384423525|ref|YP_005632883.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae LMA3984-4]
gi|327483078|gb|AEA77485.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae LMA3984-4]
Length = 620
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNSMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|237838631|ref|XP_002368613.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211966277|gb|EEB01473.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
Length = 1753
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 268/449 (59%), Gaps = 29/449 (6%)
Query: 357 IKVNYIEGSNDQKWSS-WDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLM 415
++VN + + W + F W + + A N+KVFGN +FRP QR IINA +S DVFV+M
Sbjct: 706 VRVNTV----SRNWEAERGFEWDEAVRACNEKVFGNRAFRPMQRAIINAVLSQRDVFVMM 761
Query: 416 PTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEI 475
PTGGGKSL +QLPA++ G+T+V+ PLVSLI DQ+ + N+ + N W EQ+ +
Sbjct: 762 PTGGGKSLCFQLPAIVSGGVTVVVMPLVSLITDQLEQMQLLNVGCRAFAANQPWEEQKAV 821
Query: 476 LRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRP 535
EL + LL VTPEK+ S +L L LN L R IDEAHCVSQWG+DFRP
Sbjct: 822 YDELRRGTGEIHLLLVTPEKLKGSSLLRSCLHELNREGCLDRFAIDEAHCVSQWGNDFRP 881
Query: 536 DYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--- 592
DY+ L L++++PN P++ALTATAT +V +DVV L + ++F+ SF+RPNL +
Sbjct: 882 DYRQLQSLREEYPNVPLVALTATATKAVLQDVVTQLRMREPVVFQGSFDRPNLRYEVRPK 941
Query: 593 --EKVAERLQVGLSYGHFFLLKEFYVVS-LEC-----------GHKAAFYHGSIDPAQRA 638
++ E + + L Y +S EC G A FYH +D +R
Sbjct: 942 VPRRIVEDIAATIKTEFHGLSGIVYCLSRRECERVAEGLQRHAGISAGFYHAQLDAEKRE 1001
Query: 639 FVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSC 698
+Q+ W D+I +I AT+AFGMGINK DVRFVIH ++PK +E ++QE GRAGR+G+ +SC
Sbjct: 1002 EIQRDWMNDDIKVIVATLAFGMGINKRDVRFVIHCAMPKCLENFYQESGRAGRNGEEASC 1061
Query: 699 VLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDV 758
+L+Y+Y D R H+I E G R + R N ENLLRM++YCE +
Sbjct: 1062 ILFYNYHDKQRQSHLIQLNSNEAG--ASGARRQADGQASR----NEENLLRMLAYCEEEE 1115
Query: 759 DCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+CRR L HFGE F A C CDNC +
Sbjct: 1116 ECRRRFILRHFGEDFRGA-CTVACDNCRR 1143
>gi|397169212|ref|ZP_10492647.1| ATP-dependent DNA helicase [Alishewanella aestuarii B11]
gi|396089292|gb|EJI86867.1| ATP-dependent DNA helicase [Alishewanella aestuarii B11]
Length = 605
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 232/655 (35%), Positives = 349/655 (53%), Gaps = 79/655 (12%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+++L A K+ FG S+R Q+EII+A + G D FVL+PTGGGKSL YQLPAL PG+TL
Sbjct: 2 SEQLLAVLKQSFGYSSWRSGQQEIISAVLQGRDCFVLLPTGGGKSLCYQLPALQLPGVTL 61
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
V+SPL+SL++DQ+ L I A +++ ++ ++L +L Y + KLLYV PE++
Sbjct: 62 VVSPLMSLMKDQVDSLRANGIAAAYVNSSLSREAVLDVLNQLR--YGELKLLYVAPERLL 119
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ L R L+ + ++ IDEAHC+SQWGHDFRPDY L LKQ+FP P +ALTA
Sbjct: 120 QPSFLER-LQEVG----VSLFAIDEAHCISQWGHDFRPDYMALSQLKQRFPGVPFIALTA 174
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFF 609
TA + ++D++Q LGL N I R SF+RPN+ ++ L+ L+Y G +
Sbjct: 175 TADPATQQDILQQLGLSNPYIHRGSFDRPNIRYTVQEKFRPLEQLLAYLKQQENQSGIIY 234
Query: 610 L-----LKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
+ E E G+K A YH D +R VQ + +D+IN+I ATVAFGMG++K
Sbjct: 235 CSSRRKVDELTAQLQERGYKVAAYHAGHDSTERQRVQDAFKRDDINLIVATVAFGMGVDK 294
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
P++RFV+H LP++IE Y+QE GRAGRDG + VL + +D R+K + AE++P
Sbjct: 295 PNIRFVVHFELPRTIEAYYQETGRAGRDGVAAEAVLLFDPADIGRMKRWLE---AEENP- 350
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
GR E + L M ++ E CRRL+ L +FGE A C CD
Sbjct: 351 ------------GRA-EVVWQRFLSMAAFAEAQT-CRRLVLLNYFGEARQQA-C-GNCDI 394
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C + + D T+ A++ + V GQ F H++EV RG Q + H+ +S G
Sbjct: 395 C--LNPPQQFDGTELAQQALSCVYRVGQNFGLHHVIEVLRGGQTQKILDFGHDKVSTWGL 452
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
GK L+ I R L+ L +++ S SVL++ + A ++ G Q + L
Sbjct: 453 GKALSHDYWLSIFRQLIHFGLLQQDI-------SHHSVLRLLPA-ARPVLRGEQQLSLAV 504
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P +L PAK + + N +L++ LR LR +
Sbjct: 505 P------RLQSVAKAPAKLA---------------------NQNYDRQLFARLRALRKRI 537
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + V + +F +ATL + +++P +L ++G+G K+ +YG L I
Sbjct: 538 AER--DDVPPFVVFSDATLIDMCQKLPTDNAGMLAVSGVGYTKLGRYGADFLTEI 590
>gi|170593171|ref|XP_001901338.1| Bloom's syndrome protein homolog [Brugia malayi]
gi|158591405|gb|EDP30018.1| Bloom's syndrome protein homolog, putative [Brugia malayi]
Length = 1054
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 239/677 (35%), Positives = 365/677 (53%), Gaps = 69/677 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG + FR Q+ I A + G+D F+LMPTG GKSL YQLPA++ GIT+VISPL SL
Sbjct: 290 KSRFGFNQFRHRQKHAIIAALLGYDCFILMPTGAGKSLCYQLPAILSKGITVVISPLKSL 349
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
I+DQ M + + I L+ + E I LN K KLLYVTPEK+A S+ L
Sbjct: 350 IEDQKMKMKELEICCYALTSELNQAESDRIYSMLNESSPKIKLLYVTPEKIAASEKLNNM 409
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF--PNTPVLALTATATASV 563
SL+ R+LL R V+DEAHCVSQWGHDFRPDY L L++ F P PV+ALTATAT +
Sbjct: 410 FFSLHRRDLLTRFVVDEAHCVSQWGHDFRPDYTKLQSLRRMFTNPVVPVMALTATATPKI 469
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERLQV------GLSYGHFF 609
D+ L + +F SF R NL D +V +R+++ G+ Y
Sbjct: 470 VTDIRVHLAIQQSKLFISSFVRTNLKYDVIAKGPRSLVRVMDRMKILYPDKSGIVYCLSR 529
Query: 610 LLKEFYVVSLECGHKAA--FYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E LE H + YH + +R VQ +W +++N+ICAT+AFGMGI+KPDV
Sbjct: 530 RDCELVSKMLE-NHAISSEVYHAGLSDKKRLEVQTKWISNQVNVICATIAFGMGIDKPDV 588
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH S+PKSIE Y+QE GRAGRDG S C + YSY+D +R++ MI G
Sbjct: 589 RFVIHFSMPKSIEAYYQETGRAGRDGLNSYCAILYSYNDSVRIRKMIE-----------G 637
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT---CDN 784
N N+ V + ++L++V+YCEN CRR L + HFGE +D+ C+ + CD
Sbjct: 638 EN-----NTQGVRTMHLNSVLQIVAYCENVSICRRKLLVEHFGEVYDAEACRTSNSPCDV 692
Query: 785 C-SKIK---SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQ-----YVKKHR 835
C +IK ++ DVT+ A KLV L + ++ +++RG + Q +
Sbjct: 693 CVQQIKNANAYKVYDVTEEA-KLVTQSMLYMHNVTLKYLADLYRGHMGQKKFVDMAMRLG 751
Query: 836 HETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLII 895
H ++ G G + +++A R +R LVI+ + E++ + +G+ + ++ + +
Sbjct: 752 HTKYAMFGRGVRMQETDALRFVRKLVIDGVITEQLYNTK-FGTTVAYAELTE-------L 803
Query: 896 GRQ--NVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKL 953
GR+ N R ++ S D + G ++G +S + + + + E + A L
Sbjct: 804 GRELANGHSRMKVYLHIXNQSDDD---SHGMEVAGLMSIN-SVSEVEALKERYMVKHADL 859
Query: 954 YSSLR--MLRTLLVKEAGEGVMAY-HIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
+S + +LR + EG+ + I + ++ ++ +PRT +LL+I+ + K +
Sbjct: 860 FSKCKGDLLRLFSDIASAEGLSNHLPIINSEGIEQIAALMPRTYSDLLQIDSMTVRKAER 919
Query: 1011 YGVRLLETIESTIKEFY 1027
YG +++ +KE++
Sbjct: 920 YGAQIM----CMLKEYW 932
>gi|434389644|ref|YP_007100255.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
gi|428020634|gb|AFY96728.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
Length = 743
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 237/666 (35%), Positives = 357/666 (53%), Gaps = 81/666 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FR QREII ++ D+ V+MPTGGGKSL +QLPAL+ G+T+V+S
Sbjct: 11 LEHALKHYFGYDEFRSGQREIITTALANRDLLVVMPTGGGKSLCFQLPALLKNGVTIVVS 70
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L IPATFL+ ++ E+++ + +++ + KLLYV PE++ +
Sbjct: 71 PLIALMQDQVQLLANNGIPATFLNSSITTEEKRDRVAAIHNG--EIKLLYVAPERL-NQE 127
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ L L+ +A IDEAHCVS+WGHDFRPDY+ L L+ FP P L LTATAT
Sbjct: 128 FISNFLVDLHQEVGIAGFAIDEAHCVSEWGHDFRPDYRKLAQLRHYFPKVPWLGLTATAT 187
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK--------VAERLQVGLSYGHFFLLK 612
V+ D++ L L + SFNRPNL+ + + + +++ G + L
Sbjct: 188 DRVRSDIINQLELREPHVHIASFNRPNLYYEVRRKTTAPYKELLAQVKQSEGSGIIYCLS 247
Query: 613 EFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V L G K YH +D R Q + +D++ +I ATVAFGMGINKPDV
Sbjct: 248 RKKVDELTTKLKQDGIKVVPYHAGLDGETRTKNQNSFIRDDVKVIVATVAFGMGINKPDV 307
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH+ LP++IEGY+QE GRAGRDG+ + C LY+ D ++++I+Q V ++
Sbjct: 308 RFVIHYDLPRNIEGYYQESGRAGRDGEPAHCTLYFGMGDIKTIEYLIAQKVDPETGMA-- 365
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ + R+ T+ L R+++Y E +CRR++QL +FGE F +C CDNC
Sbjct: 366 -----LEDEQRI---ATQQLRRVINYAEA-TECRRIIQLGYFGESF-PGNC-DNCDNCKY 414
Query: 788 IKSFIEKDVTDTAKKLVELV-----KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
+ D T A+KL+ V + G+ F +H ++V RGS N V K+ H+TLS +
Sbjct: 415 PRPI--SDWTIEAQKLLSCVYRFGERHNGRTFGLAHTIDVLRGSKNDKVLKNGHDTLSTY 472
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK + E R+L ++ L++E SD Y SVL +N G +L
Sbjct: 473 GIGKDRSVDEW-RMLGRSLLHQGLVDET--SDGY----SVLTLN---------GLSMEIL 516
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLS--AKLYSSLRML 960
+ S + + ++P K PS NEV N + LY+ L L
Sbjct: 517 K------SQRKVEIAISPIK---------------PSVAANEVSTNTAEIQALYNRLHKL 555
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R V Y IF +++L+ ++++ P+T + +I+G+G K+++YG E
Sbjct: 556 RKQYAD--ANKVAPYVIFADSSLRLMAQQQPQTLAQFAQISGVGARKLAQYG----EMFT 609
Query: 1021 STIKEF 1026
I+ F
Sbjct: 610 GEIRAF 615
>gi|393911582|gb|EJD76373.1| CBR-HIM-6 protein [Loa loa]
Length = 1044
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 240/676 (35%), Positives = 356/676 (52%), Gaps = 65/676 (9%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG + FR Q+ I A + G+D F+LMPTG GKSL YQLPA++ G+T+VISPL SL
Sbjct: 284 KSRFGFNQFRHRQKHAIIAALLGYDCFILMPTGAGKSLCYQLPAVLSEGVTVVISPLKSL 343
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
I+DQ M + + I L+ + E I LN + K KLLYVTPEK+A S+ L
Sbjct: 344 IEDQKMKMKELEICCYALTSELSQAESDRIYGMLNENSPKIKLLYVTPEKIAASEKLNNV 403
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF--PNTPVLALTATATASV 563
SL+ R LL R V+DEAHCVSQWGHDFRPDY L L++ F P PV+ALTATAT +
Sbjct: 404 FHSLHRRGLLTRFVVDEAHCVSQWGHDFRPDYTKLQSLRRMFTNPVVPVMALTATATPKI 463
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERLQV------GLSYGHFF 609
D L + +F SF R NL D KV +R+++ G+ Y
Sbjct: 464 VTDTRVHLAIQQSKLFISSFVRTNLKYDVIAKGPRSLLKVMDRMKILYPGKSGIVYCLSR 523
Query: 610 LLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E LE + YH + +R VQ +W + +N+ICAT+AFGMGI+KPDVR
Sbjct: 524 KDCESVAKMLESHSMSSEVYHAGLSDKKRLEVQTRWINNRVNVICATIAFGMGIDKPDVR 583
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FVIH S+PKSIEGY+QE GRAGRDG S C + YSY+D +R++ MI G
Sbjct: 584 FVIHFSIPKSIEGYYQETGRAGRDGLNSYCAILYSYNDSVRIRKMIE-----------GE 632
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT---CDNC 785
N N+ V + ++L +V+YCEN CRR + HFGE +D+ C+K+ CD C
Sbjct: 633 N-----NTQGVRTMHLSSVLEIVAYCENVSICRRKWLVEHFGEVYDAEACRKSNSPCDIC 687
Query: 786 -SKIK---SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQ-----YVKKHRH 836
+IK ++ DVT+ A KLV L + ++ +++RG + Q + H
Sbjct: 688 VQQIKNANAYKVYDVTEEA-KLVAQSMLHMHNVTLKYLADLYRGRMGQKKFADMAVRLGH 746
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEV--KKSDVYGSVSSVLKVNQSKAHNLI 894
++ G G + +++ASR +R LVI+ + E++ K D + + + ++ + A+
Sbjct: 747 TKYAMFGRGVGMQETDASRFVRKLVIDGIITEQLYNTKFDTTVAYAELTELGRELANGR- 805
Query: 895 IGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLY 954
R V L + + + S A S+ S + + E + A L+
Sbjct: 806 -SRMKVYLHLSNQPDDGRNSHGMEVTALMSINSV--------SEMEALKEKYMVKHADLF 856
Query: 955 SSLR--MLRTLLVKEAGEGVMAY-HIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKY 1011
+ +LR + EG +Y I + ++ ++ +PRT +LL+I+ + K +Y
Sbjct: 857 GKCKRDLLRLFSDIASTEGFSSYLPIINSEGIEQIAALMPRTYSDLLQIDSMTARKAERY 916
Query: 1012 GVRLLETIESTIKEFY 1027
G +++ +KE++
Sbjct: 917 GAQIM----CMLKEYW 928
>gi|6714387|gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thaliana]
Length = 624
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/427 (45%), Positives = 256/427 (59%), Gaps = 35/427 (8%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE N +FGN FRP Q + A+M D FVLMPTGGGKSL YQLPA + G+T+VIS
Sbjct: 212 LEFANLVIFGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATLKAGVTIVIS 271
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L+ IPATFL+ ++ +L+EL D KLLYVTPEK+A S
Sbjct: 272 PLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVTPEKIAGS 331
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L L L+ + LLA V+DEAHCVSQWGHDFRPDY+ LG LKQ FP PV+ALTATA
Sbjct: 332 SSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTATA 391
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNL----WMDCEKVAERLQVGL------SYGHFF 609
T SV +DV+++L + + + SF+R NL + ++ ++LQ L G +
Sbjct: 392 TESVCQDVLKSLRIPRAPVLKMSFDRINLKYEVIVKTKEPLKQLQELLRDRFKDQSGIVY 451
Query: 610 LLKEFYVVSL------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L + V + +C K +YH + QR VQ++W E+ I+CAT+AFGMGI+
Sbjct: 452 CLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMGID 511
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
K DVRFVIH++L K++E Y+QE GRAGRDG ++ C+ Y DF RV M+ G
Sbjct: 512 KADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLRNGQGR--- 568
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT-- 781
+RF A + +M YCE +CRR + L +FGE FD CK +
Sbjct: 569 ---NMDRFKSAMA---------QAKKMQQYCELKTECRRQMLLEYFGESFDRMICKSSLN 616
Query: 782 -CDNCSK 787
CDNC +
Sbjct: 617 PCDNCER 623
>gi|229527301|ref|ZP_04416694.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 12129(1)]
gi|229335309|gb|EEO00793.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 12129(1)]
Length = 620
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 229/651 (35%), Positives = 350/651 (53%), Gaps = 85/651 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKLCSNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHF 323
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 324 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP---------- 368
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
G + + L M ++ E CRR + L +FGE D K C NC K
Sbjct: 369 --DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPPK 420
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+ +
Sbjct: 421 RF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHS 477
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 478 HDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLDT 529
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 530 AARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD-- 562
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|321475158|gb|EFX86121.1| RecQ1-like protein [Daphnia pulex]
Length = 624
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 301/540 (55%), Gaps = 57/540 (10%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
Q W S DFPWTKKL K F FRP Q +NAT+ GHDV ++MPTGGGKSL YQL
Sbjct: 56 QDWESNDFPWTKKLYQTLKDAFHIEKFRPMQLSAMNATLKGHDVILIMPTGGGKSLCYQL 115
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PAL+ GITLVI+PLVSL++DQ+ L + I A L+ + E + + K
Sbjct: 116 PALVSDGITLVITPLVSLMEDQLASLEKLGIEAAKLNASSSKEEVNMVHLAMTDAKSSLK 175
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEK+AKS + +L+ + + A + +DE HC SQWGHDFRPDY+ LG+L+ F
Sbjct: 176 LLYVTPEKLAKSKRFMTKLQKMYQIKRFACVAVDEVHCCSQWGHDFRPDYKYLGVLRSLF 235
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERL 599
P P++ LTATAT +V DV + L + N ++F+ SFNRPNL+ + E + E +
Sbjct: 236 PTVPIVGLTATATLNVTNDVQKMLNMKNSLVFKASFNRPNLYYEVRIKPSTQKECIDELV 295
Query: 600 QVGLS--YGHFFLLKEFYVVSL-ECGH----------KAAFYHGSIDPAQRAFVQKQWSK 646
Q+ + +G ++ Y S+ +C + A YH S++PA R V W +
Sbjct: 296 QLLTNRFHGQSGII---YTTSVKDCDQLASELRQQKCRVASYHASLEPADRTEVHTGWRE 352
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+ + AT+AFGMGI+KPDVRFVIHHS+ KS+E ++QE GRAGRD ++ C++Y+ SD
Sbjct: 353 NRYQAVVATIAFGMGIDKPDVRFVIHHSISKSMENFYQESGRAGRDDLQACCIVYWRLSD 412
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R+ M+ FT +T NL M +YC + CRR +
Sbjct: 413 LFRLSTMV---------FTE--------------QTGLRNLYAMAAYCLDPERCRREIIA 449
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTD---TAKKLVELVKLTGQQFSSSHILEVF 823
HF E+++S+ C K CD+CSK + E ++ + T ++++E + + ++ +++ +
Sbjct: 450 SHFDERWESSSCNKMCDHCSKDSTSAEINIVEHLTTLRQILERAEEQQVRVTAQKLIDAW 509
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVL 883
+ + ++ L L + + IL H ++E +L E+ + Y ++S +L
Sbjct: 510 QNTGQVSLR------LPDFKKAAKLPRDKCESILAHFLLEGYLKEDFHFTP-YSTISYLL 562
>gi|30679600|ref|NP_187225.2| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
gi|75334309|sp|Q9FT74.1|RQL1_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 1; AltName:
Full=RecQ-like protein 1; Short=AtRecQ1; Short=AtRecQl1
gi|10944747|emb|CAC14163.1| DNA Helicase [Arabidopsis thaliana]
gi|332640767|gb|AEE74288.1| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
Length = 606
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/427 (45%), Positives = 256/427 (59%), Gaps = 35/427 (8%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE N +FGN FRP Q + A+M D FVLMPTGGGKSL YQLPA + G+T+VIS
Sbjct: 194 LEFANLVIFGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATLKAGVTIVIS 253
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L+ IPATFL+ ++ +L+EL D KLLYVTPEK+A S
Sbjct: 254 PLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVTPEKIAGS 313
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L L L+ + LLA V+DEAHCVSQWGHDFRPDY+ LG LKQ FP PV+ALTATA
Sbjct: 314 SSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTATA 373
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNL----WMDCEKVAERLQVGL------SYGHFF 609
T SV +DV+++L + + + SF+R NL + ++ ++LQ L G +
Sbjct: 374 TESVCQDVLKSLRIPRAPVLKMSFDRINLKYEVIVKTKEPLKQLQELLRDRFKDQSGIVY 433
Query: 610 LLKEFYVVSL------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L + V + +C K +YH + QR VQ++W E+ I+CAT+AFGMGI+
Sbjct: 434 CLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMGID 493
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
K DVRFVIH++L K++E Y+QE GRAGRDG ++ C+ Y DF RV M+ G
Sbjct: 494 KADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLRNGQGR--- 550
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT-- 781
+RF A + +M YCE +CRR + L +FGE FD CK +
Sbjct: 551 ---NMDRFKSAMA---------QAKKMQQYCELKTECRRQMLLEYFGESFDRMICKSSLN 598
Query: 782 -CDNCSK 787
CDNC +
Sbjct: 599 PCDNCER 605
>gi|312091032|ref|XP_003146836.1| RecQ helicase [Loa loa]
Length = 970
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 240/676 (35%), Positives = 356/676 (52%), Gaps = 65/676 (9%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG + FR Q+ I A + G+D F+LMPTG GKSL YQLPA++ G+T+VISPL SL
Sbjct: 284 KSRFGFNQFRHRQKHAIIAALLGYDCFILMPTGAGKSLCYQLPAVLSEGVTVVISPLKSL 343
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
I+DQ M + + I L+ + E I LN + K KLLYVTPEK+A S+ L
Sbjct: 344 IEDQKMKMKELEICCYALTSELSQAESDRIYGMLNENSPKIKLLYVTPEKIAASEKLNNV 403
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF--PNTPVLALTATATASV 563
SL+ R LL R V+DEAHCVSQWGHDFRPDY L L++ F P PV+ALTATAT +
Sbjct: 404 FHSLHRRGLLTRFVVDEAHCVSQWGHDFRPDYTKLQSLRRMFTNPVVPVMALTATATPKI 463
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERLQV------GLSYGHFF 609
D L + +F SF R NL D KV +R+++ G+ Y
Sbjct: 464 VTDTRVHLAIQQSKLFISSFVRTNLKYDVIAKGPRSLLKVMDRMKILYPGKSGIVYCLSR 523
Query: 610 LLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E LE + YH + +R VQ +W + +N+ICAT+AFGMGI+KPDVR
Sbjct: 524 KDCESVAKMLESHSMSSEVYHAGLSDKKRLEVQTRWINNRVNVICATIAFGMGIDKPDVR 583
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FVIH S+PKSIEGY+QE GRAGRDG S C + YSY+D +R++ MI G
Sbjct: 584 FVIHFSIPKSIEGYYQETGRAGRDGLNSYCAILYSYNDSVRIRKMIE-----------GE 632
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT---CDNC 785
N N+ V + ++L +V+YCEN CRR + HFGE +D+ C+K+ CD C
Sbjct: 633 N-----NTQGVRTMHLSSVLEIVAYCENVSICRRKWLVEHFGEVYDAEACRKSNSPCDIC 687
Query: 786 -SKIK---SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQ-----YVKKHRH 836
+IK ++ DVT+ A KLV L + ++ +++RG + Q + H
Sbjct: 688 VQQIKNANAYKVYDVTEEA-KLVAQSMLHMHNVTLKYLADLYRGRMGQKKFADMAVRLGH 746
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEV--KKSDVYGSVSSVLKVNQSKAHNLI 894
++ G G + +++ASR +R LVI+ + E++ K D + + + ++ + A+
Sbjct: 747 TKYAMFGRGVGMQETDASRFVRKLVIDGIITEQLYNTKFDTTVAYAELTELGRELANGR- 805
Query: 895 IGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLY 954
R V L + + + S A S+ S + + E + A L+
Sbjct: 806 -SRMKVYLHLSNQPDDGRNSHGMEVTALMSINSV--------SEMEALKEKYMVKHADLF 856
Query: 955 SSLR--MLRTLLVKEAGEGVMAY-HIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKY 1011
+ +LR + EG +Y I + ++ ++ +PRT +LL+I+ + K +Y
Sbjct: 857 GKCKRDLLRLFSDIASTEGFSSYLPIINSEGIEQIAALMPRTYSDLLQIDSMTARKAERY 916
Query: 1012 GVRLLETIESTIKEFY 1027
G +++ +KE++
Sbjct: 917 GAQIM----CMLKEYW 928
>gi|375109707|ref|ZP_09755949.1| ATP-dependent DNA helicase [Alishewanella jeotgali KCTC 22429]
gi|374570229|gb|EHR41370.1| ATP-dependent DNA helicase [Alishewanella jeotgali KCTC 22429]
Length = 605
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 232/655 (35%), Positives = 349/655 (53%), Gaps = 79/655 (12%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+++L A K+ FG S+R Q+EII+A + G D FVL+PTGGGKSL YQLPAL PG+TL
Sbjct: 2 SEQLLAVLKQSFGYSSWRNGQQEIISAVLQGRDCFVLLPTGGGKSLCYQLPALQLPGVTL 61
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
V+SPL+SL++DQ+ L I A +++ ++ ++L +L Y + KLLYV PE++
Sbjct: 62 VVSPLMSLMKDQVDSLRANGIAAAYVNSSLSREAVLDVLNQLR--YGELKLLYVAPERLL 119
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ L R L+ + ++ IDEAHC+SQWGHDFRPDY L LKQ+FP P +ALTA
Sbjct: 120 QPSFLER-LQEVG----VSLFAIDEAHCISQWGHDFRPDYMALSQLKQRFPGVPFIALTA 174
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFF 609
TA + ++D++Q LGL N I R SF+RPN+ ++ L+ L+Y G +
Sbjct: 175 TADPATQQDILQQLGLSNPYIHRGSFDRPNIRYTVQEKFRPLEQLLAYLKQQENQSGIIY 234
Query: 610 L-----LKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
+ E E G+K A YH D +R VQ + +D+IN+I ATVAFGMG++K
Sbjct: 235 CSSRRKVDELTAQLQERGYKVAAYHAGHDSTERQRVQDAFKRDDINLIVATVAFGMGVDK 294
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
P++RFV+H LP++IE Y+QE GRAGRDG + VL + +D R+K + AE++P
Sbjct: 295 PNIRFVVHFELPRTIEAYYQETGRAGRDGVAAEAVLLFDPADIGRMKRWLE---AEENP- 350
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
GR E + L M ++ E CRRL+ L +FGE A C CD
Sbjct: 351 ------------GRA-EVVWQRFLSMAAFAEAQT-CRRLVLLNYFGEARQQA-C-GNCDI 394
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C + + D T+ A++ + V GQ F H++EV RG Q + H+ +S G
Sbjct: 395 C--LNPPQQFDGTELAQQALSCVYRVGQNFGLHHVIEVLRGGQTQKILDFGHDKVSTWGL 452
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
GK L+ I R L+ L +++ S SVL++ + A ++ G Q + L
Sbjct: 453 GKALSHDYWLSIFRQLIHFGLLQQDI-------SHHSVLRLLPA-ARPVLRGEQQLSLAV 504
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P +L PAK + + N +L++ LR LR +
Sbjct: 505 P------RLQSVAKAPAKLA---------------------NQNYDRQLFARLRALRKRI 537
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + V + +F +ATL + +++P +L ++G+G K+ +YG L I
Sbjct: 538 AER--DDVPPFVVFSDATLIDMCQKLPTDNAGMLAVSGVGYTKLGRYGADFLTEI 590
>gi|424810032|ref|ZP_18235399.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus SX-4]
gi|342322670|gb|EGU18458.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus SX-4]
Length = 611
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 230/653 (35%), Positives = 356/653 (54%), Gaps = 89/653 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 22 EVFGYQQFRVGQQEVIEAALQGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTFAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
+L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 139 SNLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y F K+
Sbjct: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIY--FGSRKKV 252
Query: 615 YVVSLE-CGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+++ + CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+
Sbjct: 253 EMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVV 312
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H +P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 313 HFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP-------- 359
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI--- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 360 ----DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDP 409
Query: 789 -KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 410 PKRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRD 466
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 467 HSHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRL 518
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 519 DTAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD 553
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 --EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|422908717|ref|ZP_16943388.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-09]
gi|341638676|gb|EGS63315.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-09]
Length = 611
Score = 360 bits (923), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 230/655 (35%), Positives = 355/655 (54%), Gaps = 87/655 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 22 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 139 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK---VAERL--------QVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK V++ + Q G+ Y E
Sbjct: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQHGQCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 360 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 411 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 468 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 520 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+ +
Sbjct: 554 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEYL 607
>gi|113971918|ref|YP_735711.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-4]
gi|113886602|gb|ABI40654.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-4]
Length = 607
Score = 359 bits (922), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 230/667 (34%), Positives = 353/667 (52%), Gaps = 89/667 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I SG D V+MPTGGGKSL YQLPAL+ P
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCSGEDCLVIMPTGGGKSLCYQLPALLMP 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ + + E+LR+L+ + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVNAAYLNSSQPREQSVEVLRQLHRG--ELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R + SL L+ IDEAHC+SQWGHDFRP+Y LG LKQ FP+ P++
Sbjct: 124 ERLLTADFIER-MRSLP----LSMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPHVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++++ + LG +N SF+RPN+ VAE+L F L +
Sbjct: 179 ALTATADQATRQNICERLG-INPFKLLSSFDRPNIRY---TVAEKLNAANQLRQFLLQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + P +R VQ + KD+I+I+ ATVA
Sbjct: 235 GSSGIVYCSSRRRVDEVAERLTLQGFHAKAYHAGMTPQERGEVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVDFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIYRIGQRFGINHLIEVLRGSKGAAIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ LS G GK + ++R L+ +++ + S + +N S A ++ G
Sbjct: 452 DKLSTWGIGKDKSHEYWLSVIRQLIHLGLASQDITR-------GSSITLNPS-ARPILKG 503
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSS 956
++L P I T + K VT Q+ LN KL++
Sbjct: 504 EVALMLAEPR-IQLTNI-KRKVT----------------------QSRAPLNYDRKLFAR 539
Query: 957 LRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
L+ LR + +E + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G L
Sbjct: 540 LKALRRTIAEE--QDVPPYLVFNDATLAEMAAMMPTSPGEMLAVNGVGERKLSRFGDDFL 597
Query: 1017 ETIESTI 1023
+ I + +
Sbjct: 598 DEIAAYL 604
>gi|254226334|ref|ZP_04919924.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V51]
gi|125621139|gb|EAZ49483.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V51]
Length = 620
Score = 359 bits (922), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 229/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D + C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----QPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|258620546|ref|ZP_05715583.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM573]
gi|258587061|gb|EEW11773.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM573]
Length = 620
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 351/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALQGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTFAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
+L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SNLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|224074554|ref|XP_002304389.1| predicted protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 213/533 (39%), Positives = 294/533 (55%), Gaps = 58/533 (10%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ + WS F W + + +FG S+R NQ+EIINA MSG DV V+M GGGKSL
Sbjct: 66 SSLEDWSG-SFEWDSQADDVRLNIFGIPSYRQNQKEIINAIMSGRDVLVIMAAGGGKSLC 124
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPA++ G+ LVISPL+SLIQDQ+M L IPA L+ ++ I + L
Sbjct: 125 YQLPAILRDGVALVISPLLSLIQDQVMGLTALGIPAFMLTSTTSKENEKFIYKALEKGEG 184
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ K+LYVTPEK++KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ L ILK
Sbjct: 185 ELKILYVTPEKISKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKSLSILK 244
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW-----------MDCE 593
+F N PV+ALTATAT V+ DV++ L + C+ F + NRPNL+ + +
Sbjct: 245 TQFSNVPVVALTATATQKVQYDVMEMLRIPKCVKFVSTVNRPNLFYTVRSKSSVGKVVVD 304
Query: 594 KVAERLQVGLSYG-----HFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWS 645
++AE +Q S + F KE V+ E G A +YH +D R V WS
Sbjct: 305 EIAEFIQESYSNSESGIVYCFSRKECEQVAAELRERGIAADYYHADMDVNAREKVHTWWS 364
Query: 646 KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYS 705
K+++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S CVL+Y +
Sbjct: 365 KNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLFYRPA 424
Query: 706 DFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQ 765
D R M+ NSG +NL +V YC++ CRR
Sbjct: 425 DVPRQSSMVF-----------------YENSG------LQNLYDIVRYCQSKRQCRRNAF 461
Query: 766 LVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRG 825
HF E C CDNC+ + +E DV+ AK +V L++ T ++ R
Sbjct: 462 FRHFAEPLQD--CNGMCDNCAFLSEVMEVDVSRHAKVMVSLLQDTQEKDQ--------RL 511
Query: 826 SLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGS 878
++ Q V K +++ G + K E +++ L++ DF+ +E + Y +
Sbjct: 512 TMLQLVDKMKNK----KELGSDIKKEEMEQLVIQLIL-DFVFKEEYQHTAYAT 559
>gi|417819060|ref|ZP_12465679.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE39]
gi|423944442|ref|ZP_17733123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-40]
gi|423973888|ref|ZP_17736668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-46]
gi|340042950|gb|EGR03911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE39]
gi|408662447|gb|EKL33390.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-40]
gi|408666471|gb|EKL37258.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-46]
Length = 611
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 354/652 (54%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 22 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 139 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK---VAERL--------QVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK V++ + Q G+ Y E
Sbjct: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQHGQCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 360 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 411 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 468 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 520 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|229524849|ref|ZP_04414254.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae bv. albensis VL426]
gi|229338430|gb|EEO03447.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae bv. albensis VL426]
Length = 620
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 229/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F + T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---EATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|419835117|ref|ZP_14358565.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46B1]
gi|421341784|ref|ZP_15792193.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43B1]
gi|421353007|ref|ZP_15803345.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-45]
gi|423733466|ref|ZP_17706697.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41B1]
gi|424007762|ref|ZP_17750719.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-44C1]
gi|395946961|gb|EJH57619.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43B1]
gi|395955466|gb|EJH66062.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-45]
gi|408632325|gb|EKL04786.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41B1]
gi|408859258|gb|EKL98919.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46B1]
gi|408867878|gb|EKM07231.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-44C1]
Length = 611
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 354/652 (54%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 22 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTTEFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 139 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK---VAERL--------QVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK V++ + Q G+ Y E
Sbjct: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQHGQCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 360 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 411 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 468 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 520 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|262404934|ref|ZP_06081486.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC586]
gi|262348773|gb|EEY97914.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC586]
Length = 620
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 229/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVREGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLTREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNIPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D + C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----QPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|229521104|ref|ZP_04410525.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TM 11079-80]
gi|229341989|gb|EEO06990.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TM 11079-80]
Length = 620
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 230/652 (35%), Positives = 354/652 (54%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTTEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK---VAERL--------QVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK V++ + Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQHGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|427712781|ref|YP_007061405.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427376910|gb|AFY60862.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 732
Score = 359 bits (921), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 355/646 (54%), Gaps = 76/646 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG +FRP Q EIINA+++ DV ++PTGGGKS+ +QLPAL+ PG+TLV+SPL++L
Sbjct: 8 KHYFGYEAFRPGQAEIINASLNQQDVLAILPTGGGKSICFQLPALLKPGVTLVVSPLIAL 67
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQ-EILRELNSDYCKYKLLYVTPEKVAKSDVLLR 504
+ DQ++ L + IPATFL+ + E + I LN + KLLYV PE++ SD
Sbjct: 68 MLDQVLALQKNGIPATFLNSTLAAAEARARIHSILNGEV---KLLYVAPERLV-SDSFTA 123
Query: 505 QLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
L +++ +A V+DEAHCVS+WGHDFRPDY+ L L++ FP+ P++ALTATAT V+
Sbjct: 124 LLANIHQTVGIASFVVDEAHCVSEWGHDFRPDYRQLSRLRELFPSIPMMALTATATHCVR 183
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERLQVGLSYGHFFLLKE-----FYVVS 618
D+ + L L I SFNRPNL+ + EK R +V LS ++ K Y +S
Sbjct: 184 ADITEQLSLKQPFIHVASFNRPNLYYEVIEK--SRGKVSLSELTRYIKKTEGSGIIYCMS 241
Query: 619 L-----------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E G A YH ++ R Q ++ +D++ I+ ATVAFGMGINKPDV
Sbjct: 242 RKNVEKLASELNENGISALPYHAGLNNDTRTDHQTRFIRDDVQIMVATVAFGMGINKPDV 301
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH+ LP++IEGY+QE GR GRDG+ + C L++S D + I V ++ P
Sbjct: 302 RFVIHYDLPQTIEGYYQESGRGGRDGEPARCTLFFSPGDIKQADWFIQNKVHPETN-EPL 360
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ +A + L ++ +Y ++ + CRR L +FGE F +C + CDNC
Sbjct: 361 EDEQRIAR---------QQLRQIAAYADSTL-CRRTTLLGYFGEAF-PGNCGQ-CDNCRF 408
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K ++D T A+K + V TG++F S +I++V RGS V K+ HETLS G G
Sbjct: 409 PKP--KQDWTIEAQKFLSCVARTGERFGSRYIIDVLRGSTRDKVTKNGHETLSTFGIGLD 466
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ E + R LV ++ + E D +G +L +N + + ++ G+ V + P+
Sbjct: 467 KSIKEWQHLARSLVQQNLVNE---SDDGHG----ILTLN-TLSWAVLRGQHQVWVALPN- 517
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLN-LSAKLYSSLRMLRTLLVK 966
+LSK VT K E DL + L+ SLR LR L
Sbjct: 518 ----QLSKEKVTIEK---------------------EPDLGPIHTGLFQSLRTLRKELAD 552
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+ +G+ Y IF +++L+ +++ P + +I G+G K+ YG
Sbjct: 553 D--QGLAPYMIFTDSSLKEMARYRPCSLPSFSKITGVGDKKLEVYG 596
>gi|340374034|ref|XP_003385544.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Amphimedon
queenslandica]
Length = 775
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 209/565 (36%), Positives = 304/565 (53%), Gaps = 66/565 (11%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W + FPW++ L VF SFRP Q INA MS DV ++MPTGGGKSL YQLPA
Sbjct: 63 WETMTFPWSQILLTTLNSVFKIESFRPLQLPCINALMSKRDVMLIMPTGGGKSLCYQLPA 122
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL--NSDYCKYK 487
+I G LVISPLVSL++DQ+M + + I ++ + +++ + SD K
Sbjct: 123 VISGGFALVISPLVSLMEDQLMSVKRLGINCAMINSSSPQAHVKKVHSSMIDKSDR-SLK 181
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
L+YVTPEK+AKS V + +L+ L+ IVIDE HC SQWGHDFRPDY+ LGILK++F
Sbjct: 182 LVYVTPEKIAKSKVFMSKLDKAYGLGRLSIIVIDEVHCASQWGHDFRPDYKVLGILKRQF 241
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--------EKVAERL 599
PN+P+L LTATAT+ V D L L +C+IF+ S+NRPNL+ + E+V +
Sbjct: 242 PNSPLLGLTATATSKVFSDCKNILNLRSCLIFKASYNRPNLFYEVHNKISSQKEQVDTMI 301
Query: 600 QV---------GLSYGHFFLLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEI 649
Q+ G+ Y E ++L+ G A YHG +D R +W +I
Sbjct: 302 QLINSRFKDQSGIVYCFSQKDAEQVSIALQTGSISATCYHGGMDAGDRTKAHTEWYDGKI 361
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
+I ATVAFGMGI+K +VRF++HHS+ KS+E Y+QE GRAGRDGQ ++C+LYY +D R
Sbjct: 362 QVIVATVAFGMGIDKSNVRFIMHHSISKSMENYYQESGRAGRDGQPATCILYYKLADVFR 421
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
M S+ T+ NL MV YC + V CRR L HF
Sbjct: 422 QSTMSSKDF-----------------------TSVANLYPMVQYCIDAVQCRRALIAKHF 458
Query: 770 GEKFDSAHCKKTCDNCSKIKS-----FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFR 824
GE + + C + CD C K+KS + +DV++ +E++ + ++ + +++ ++
Sbjct: 459 GETWKQSDCNEMCDTC-KVKSRRSNDIVTEDVSNICLGFIEVLGNSSKRLTGHMLVDKWK 517
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLK 884
S + +G + R+L H ++ + L E + Y ++S +
Sbjct: 518 SSSIASTQ---------FSSGNKPGIDKLERVLSHCLLTNILKESFHYTS-YNTISYI-- 565
Query: 885 VNQSKAHNLIIGRQNVVL----RFP 905
V KA + G+ V + RFP
Sbjct: 566 VPDKKAAAVKTGKMTVNIERLNRFP 590
>gi|300176399|emb|CBK23710.2| unnamed protein product [Blastocystis hominis]
Length = 755
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 247/742 (33%), Positives = 392/742 (52%), Gaps = 83/742 (11%)
Query: 328 NSSSVSFSSVDRLGVSSYPVEREPFIP-KIIKVNYIEGSNDQKWSSW--DFPWT-KKLEA 383
NS+S+ F++ + S++P++ + K V + +G+ + S + P + K+L
Sbjct: 12 NSTSIQFATAN----STFPIDSTAKVEHKSFSVTFGDGTEIRDISGLLKNCPVSDKELLD 67
Query: 384 NNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLV 443
NK+VFG+++FR Q E++ ++G VF +MPTGGGKSL YQLPAL+ PGIT+V+SPL+
Sbjct: 68 KNKEVFGHNAFRSGQMEVMKTVLTGRSVFCIMPTGGGKSLCYQLPALLLPGITVVVSPLI 127
Query: 444 SLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS-DYCKYKLLYVTPEKVAKSDVL 502
SL+QDQI L +A + ++G+ + + + + + KL+Y TPEK+ KS+ +
Sbjct: 128 SLVQDQIRGLQEAGVEVGAMTGSSGGEVPSALWNSVRTRQFPRLKLVYTTPEKLNKSESM 187
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK-QKFPNTPVLALTATATA 561
L +L++ L+ VIDE HC+SQWGHDFR DY+ LG ++ + F N P++A TATATA
Sbjct: 188 KNLLRALSSLGFLSLFVIDEVHCMSQWGHDFRVDYKELGKVRFEFFQNVPLMAFTATATA 247
Query: 562 SVKEDVVQALGLVN---CIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVS 618
+VK D+++ L LVN ++F++SFNRP L + Q + L K+
Sbjct: 248 TVKNDILKLL-LVNGKEILVFQKSFNRPELRYEVRSKKNHRQFISDVSAYILSKQLNNTG 306
Query: 619 -LECG----------------------HKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
+ CG K FYH ++P +R +Q++WS+D++ II AT
Sbjct: 307 IIYCGTQMACEKVCKDLQEAMKNEGYERKIGFYHAGLEPMERERIQREWSEDQLKIIVAT 366
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGINK DVRFVIH+ LP S+ Y+QE GRAGRD + C+LY+++ D +++I
Sbjct: 367 VAFGMGINKTDVRFVIHYMLPHSLTHYYQEAGRAGRDRNPADCILYFNFQDKKTAENLIR 426
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
Q + ++ N + L R+V+YC+N DCRR L +F E F+
Sbjct: 427 QN-----------------ENTSMINHNLQELRRVVTYCQNKEDCRRCQILKYFSEVFNR 469
Query: 776 AHC----KKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
C + CDNCS+ + F DVT A +LV L+ +++ ++ RG L+ +
Sbjct: 470 DFCGVPMHQLCDNCSQPRDFEVVDVTHIAIELVRLLSECKAPLTTNMLISAARG-LHSGL 528
Query: 832 KKHRHETLSLH---GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS 888
K H + H G K ++K E +++ L+ +D L E K + + +V V S
Sbjct: 529 KPHVLAFVQSHPSYGCAKDISKPEMEKLVTDLLQKDCLAE--KHTRLSSGWGAVYLVPGS 586
Query: 889 KAHNLIIGRQNV------VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQ 942
A L G + + P + + S+ T A G + + + + PS+
Sbjct: 587 NADRLAQGSLQIHITRPKLAPAPQPAKAVSMETSEETDAHGLIDNSNVM----EIPSR-- 640
Query: 943 NEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEING 1002
+D L +LY L M R+ L + ++ F LQ ++ VP T+EEL+ ++
Sbjct: 641 --LDDTLRKRLYDHLLMYRSFL-----QQIIGNVSFTTPVLQEMAWTVPTTQEELITLDR 693
Query: 1003 IGKAKVSKYGVRLLETIESTIK 1024
I VSKYG L+ I S ++
Sbjct: 694 ITPQFVSKYGEVFLKLINSFLE 715
>gi|404497566|ref|YP_006721672.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens GS-15]
gi|418065091|ref|ZP_12702466.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens RCH3]
gi|78195168|gb|ABB32935.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens GS-15]
gi|373562723|gb|EHP88930.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens RCH3]
Length = 601
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 230/656 (35%), Positives = 344/656 (52%), Gaps = 80/656 (12%)
Query: 383 ANN-----KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
ANN + VFG +FRP Q EI+ + G D FVLMPTGGGKSL YQ+PA+ PG+ +
Sbjct: 3 ANNPLDTLRTVFGYRTFRPFQEEIVTRLIGGGDAFVLMPTGGGKSLCYQIPAIHRPGVGI 62
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
V+SPL+SL++DQ+ L + + A + M E +++L L++ + LLYV PE++
Sbjct: 63 VVSPLISLMKDQVDTLRENGVAAAAYNSAMGEREARQVLARLHAG--ELDLLYVAPERL- 119
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+D L +L + +A IDEAHCVSQWGHDFRP+Y GLG L+ FP PV+ALTA
Sbjct: 120 MTDAFLERLREIP----VALFAIDEAHCVSQWGHDFRPEYVGLGRLRGLFPGVPVIALTA 175
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFF 609
TA + D++ LGL + ++ F+RPN+ +D +K +L L G +
Sbjct: 176 TADVQTRSDIIDRLGLRDAQVYVTGFDRPNIRYTVVDKQKPFHQLLAFLGNRPQDAGIVY 235
Query: 610 LLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
L V + + G +AA YH + +R VQ+ + +D++ ++ ATVAFGMGI+K
Sbjct: 236 ALSRKRVEEVAGKLRDAGIEAAAYHAGLADGERGRVQEAFLRDDVRVVVATVAFGMGIDK 295
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
P+VRFV+H+ LPK+IE Y+QE GRAGRDG + +L + Y D + +I G
Sbjct: 296 PNVRFVVHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIAVSRSLIESG------- 348
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
N+ + L MV + E CRR L +FGE+ A CD
Sbjct: 349 ----------NNPEQVRIELHKLNAMVGFAEAGT-CRREALLGYFGERL--AEPCGNCDL 395
Query: 785 C-SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHG 843
C +SF D T+ A+K + V GQ+F H+++V RGS N+ +++ H+ LS +G
Sbjct: 396 CLDPPESF---DATEDARKALSCVYRVGQRFGMGHVIDVLRGSKNERIQQLGHDRLSTYG 452
Query: 844 AGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
G + I+R L+ +L +++ SVLK+ + A L+ G ++ L
Sbjct: 453 IGADRSAEAWGSIIRQLIHRGYLEQDLAN-------YSVLKLTPA-ARPLLRGEVSLTLA 504
Query: 904 FPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
P + V P K K + S + + D L+ +LR LR
Sbjct: 505 KP---------RVKVAPVK------KEPKRKGVVASLAERDED------LFQALRALRKR 543
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
L E + V Y IF +ATL ++ P T ++LL +NG+G+ K+ +YG LE I
Sbjct: 544 LADE--QQVPPYVIFSDATLVEMATLRPATMDDLLRVNGVGEQKLGRYGAAFLEAI 597
>gi|357155794|ref|XP_003577240.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Brachypodium
distachyon]
Length = 599
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 191/430 (44%), Positives = 259/430 (60%), Gaps = 35/430 (8%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L N +FGN SFRP Q E +A ++ D F+LMPTGGGKSL YQLPA + PG+T+V+
Sbjct: 185 LNLANAVIFGNKSFRPLQYEACSAALNNRDCFILMPTGGGKSLCYQLPATLHPGVTVVVC 244
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQ++ L + I A+FL+ ++ +++EL + +KLLYVTPE++ +
Sbjct: 245 PLLSLIQDQVVALTFKFGIQASFLNSQQTSSQASVVMQELRNGTPSFKLLYVTPERMVGN 304
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
+ L L+ R LLAR VIDEAHCVSQWGHDFRPDY+ LG LKQ FP P++ALTATA
Sbjct: 305 YSFMEILRGLHQRGLLARFVIDEAHCVSQWGHDFRPDYRALGCLKQNFPRVPIMALTATA 364
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKV-AERLQVGLSYGHFFLLKEFYVV 617
T +V++D++ L + N ++ ++SF+R NL +M K ++Q+G F+ V
Sbjct: 365 TEAVRKDILSTLRVPNALVLKRSFDRLNLNYMVIGKTKTPQMQLGELLKERFMNMSGIVY 424
Query: 618 SL---ECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L EC A F YH + QR VQ++W + E+ +ICAT+AFGMGI+
Sbjct: 425 CLSKNECADTAKFLREKYKIKCAHYHAGLAARQRTSVQEKWHRGEVKVICATIAFGMGID 484
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVRFVIH++L KSIE Y+QE GRAGRD + CV+ Y DF R+ M+ G +S
Sbjct: 485 KPDVRFVIHNTLSKSIESYYQESGRAGRDDLPAHCVVLYQKKDFSRIVCMLRNGDNFKS- 543
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK---K 780
F VA + +M +YCE +CRR L HFGE++D CK
Sbjct: 544 -----ETFKVA---------MDQAKKMQAYCELKTECRRQTLLAHFGEQYDRQRCKDGPS 589
Query: 781 TCDNCSKIKS 790
CDNC K S
Sbjct: 590 PCDNCLKTAS 599
>gi|67924781|ref|ZP_00518182.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|416405865|ref|ZP_11687987.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
gi|67853376|gb|EAM48734.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|357261215|gb|EHJ10512.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
Length = 710
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 233/659 (35%), Positives = 362/659 (54%), Gaps = 79/659 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRP Q++II ++ D+ V+MPTGGGKSL +QLPAL+ PG+ +V+S
Sbjct: 8 LENALKDHFGYDQFRPGQKQIITEALNNKDLLVIMPTGGGKSLCFQLPALLKPGLCIVVS 67
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ LL I ATFL+ + + +Q RE + K KLLYV PE++ +D
Sbjct: 68 PLIALMQDQVDSLLDNGIGATFLNSTL--SREQLKSRENSILNGKIKLLYVAPERLL-ND 124
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ LN + L+ IDEAHCVS WGHDFRP+Y+ L L+ ++P PV+ALTATAT
Sbjct: 125 SFLNFLDFLNQKIGLSSFAIDEAHCVSAWGHDFRPEYRQLKQLRFRYPTVPVVALTATAT 184
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL--------SYGHFFLL- 611
V+ED+++ LGL + SF+RPNL+ + ++ + R L G + L
Sbjct: 185 KRVREDIIEQLGLEKPSVHLASFDRPNLYYEVQQKSRRSYAQLLNYIRSQEGSGIVYCLS 244
Query: 612 -KEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
K V+ G +A YH + +RA Q ++ +D++ II ATVAFGMGINKPDV
Sbjct: 245 RKNVETVAFRLQQDGIEALPYHAGMYDDERATNQTRFIRDDVRIIVATVAFGMGINKPDV 304
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ LP+++E Y+QE GRAGRDG+ ++C L+ S+ D ++ ++I Q
Sbjct: 305 RFVVHYDLPRNLESYYQESGRAGRDGEPANCALFLSFGDLKKIDYLIDQ----------- 353
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+S + + + L ++V Y E + +CRR + L +FG++ + +C+ CDNC
Sbjct: 354 ------KSSPKEQKIARQQLRKVVDYAEAN-ECRRTIILRYFGQQHN-GNCE-NCDNCKN 404
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K +D T A+K + V ++F +HI++V RGS + ++K+ H LS +G GK
Sbjct: 405 PKPI--EDWTIEAQKFLSCVARCQERFGMTHIIDVLRGSRKKKIEKYGHHLLSTYGIGKE 462
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ E + R L+ + F+ E SD + SVLK+N+ + + + V + +
Sbjct: 463 RSTEEWKMLGRSLIHQGFVNE---TSDGF----SVLKLNKY-SWEIFRNERKVEIAVTES 514
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
++S +L+ D P K E DL L LR LR L +
Sbjct: 515 LSSKELN--DYNPRKA--------------------ESDL-----LLDKLRQLRKHLADQ 547
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
+ Y IF +++L+ +++ P+T E I+G+ K +YG ++ S I+EF
Sbjct: 548 --NRIAPYVIFADSSLRLMAQIKPQTIEAFKNISGVTAYKAQQYG----DSFVSVIREF 600
>gi|434393955|ref|YP_007128902.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 7428]
gi|428265796|gb|AFZ31742.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 7428]
Length = 602
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 232/673 (34%), Positives = 360/673 (53%), Gaps = 94/673 (13%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
P LE+ K FG SFRP QR I+ + D+ V+MPTGGGKSL +QLPAL+ G
Sbjct: 1 MPQLSSLESALKHYFGYDSFRPGQRCIVEQALQNRDLLVVMPTGGGKSLCFQLPALLKKG 60
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEW----TEQQEILRELNSDYCKYKLLY 490
+T+V+SPL++L+QDQ+ L I ATF++ ++ T +Q IL K KLLY
Sbjct: 61 LTVVVSPLIALMQDQVEALQDNGIGATFINSSLSAYHVRTREQAILSG------KVKLLY 114
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
+ PE++ S+ L L+ ++ + ++ IDEAHCVS+WGHDFRP+Y+ L L+ +F
Sbjct: 115 IAPERLL-SEKFLPFLDLVHHQMGISAFAIDEAHCVSEWGHDFRPEYRQLQQLRHRFSGV 173
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY----- 605
P +ALTATAT V++D++Q LGLV + SFNR NL+ + + ++ SY
Sbjct: 174 PTIALTATATERVRQDIIQQLGLVEPSVHIASFNRQNLFYEVQPKQKQ-----SYQQLLQ 228
Query: 606 --------GHFFLLKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINII 652
G + L V + G A YH + R Q + +D++ ++
Sbjct: 229 LIRQQSGAGIIYCLSRRRVDEIAFKLKNDGIAALPYHAGLSDRDRTANQTSFIRDDVQVM 288
Query: 653 CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKH 712
AT+AFGMGINKPDVRFVIH+ LP+++E Y+QE GRAGRDG+ + C L+ +Y D +++
Sbjct: 289 VATIAFGMGINKPDVRFVIHYDLPRNLESYYQESGRAGRDGEPARCTLFLNYGDIKTIEY 348
Query: 713 MISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEK 772
+I+Q P +A + L +++ Y E DCRR +QL +FGE+
Sbjct: 349 LIAQ--------KPDPQEQRIAK---------QQLRQVIDYAEG-TDCRRTIQLSYFGER 390
Query: 773 FDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVK 832
F S C CDNC K +D T A K + V ++F ++I++V RG+ NQ +
Sbjct: 391 F-SGKC-DNCDNCCHPKPM--QDWTIEAMKFLSCVARCKERFGMTYIIDVLRGAKNQKIL 446
Query: 833 KHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHN 892
++ H+ LS +G GK + + + R L+ + L + +D Y SVLK+N
Sbjct: 447 QNGHQNLSTYGIGKDRSIDDWRMLGRSLLHQGLL---AQTTDGY----SVLKLNALSWE- 498
Query: 893 LIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK 952
++ RQ VL A+++T SD DTP+ + E+
Sbjct: 499 -VMRRQRSVL---IAVSATPTRISD-----------------EDTPAAAEVEL------- 530
Query: 953 LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
L+ LR LR L E +GV Y IF ++TL+ ++ + P++ +++G+G K+++YG
Sbjct: 531 LFQRLRKLRKQLADE--QGVPPYVIFADSTLRLMATQQPKSLAAFSQLSGVGSHKLARYG 588
Query: 1013 VRLLETIESTIKE 1025
+ L I++ +E
Sbjct: 589 AQFLAEIQAYCEE 601
>gi|422305600|ref|ZP_16392796.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1035(8)]
gi|408628475|gb|EKL01222.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1035(8)]
Length = 611
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 228/651 (35%), Positives = 350/651 (53%), Gaps = 85/651 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 22 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 139 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKLCSNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHF 314
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 315 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP---------- 359
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
G + + L M ++ E CRR + L +FGE D K C NC K
Sbjct: 360 --DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPPK 411
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+ +
Sbjct: 412 RF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 469 HDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMSIELAVPRLDT 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 521 AARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD-- 553
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|401401364|ref|XP_003880993.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
gi|325115405|emb|CBZ50960.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
Length = 1699
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 220/570 (38%), Positives = 314/570 (55%), Gaps = 46/570 (8%)
Query: 328 NSSSVSFSSVDRLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWSS-WDFPWTKKLEANNK 386
+ +S +F S R+G Y + + ++VN + + W F W K+ N+
Sbjct: 613 SGASSTFRSNFRVGRDDY----DAWAAGNVRVN----TASRNWEGDRSFEWDSKIHQCNQ 664
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFGN SFRP QR IINA +S DVFV+MPTGGGKSL +QLPA++ G+T+V+ PLVSLI
Sbjct: 665 EVFGNRSFRPMQRAIINAVLSQRDVFVMMPTGGGKSLCFQLPAVVSGGVTVVVMPLVSLI 724
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
DQ+ + N+ + N W EQ+ + EL + LL VTPEK+ S +L L
Sbjct: 725 TDQLEQMQLLNVGCRAFAANQPWEEQKAVYDELRRGDGEINLLLVTPEKLKGSSLLRSCL 784
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
LN L R IDEAHCVSQWG+DFRPDY+ L L++++PN P++ALTATAT +V +D
Sbjct: 785 HELNREGRLDRFAIDEAHCVSQWGNDFRPDYRQLQSLREEYPNVPLVALTATATKAVLQD 844
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERL--QVGLSYGHFF--LLKEFYVVS-LE 620
V+ L + ++F+ SF+RPNL + KV +R+ + + F L Y +S E
Sbjct: 845 VIAQLRMQEPVVFQGSFDRPNLRYEVRPKVTKRIIEDIATTIKTEFDGLSGIVYCLSRRE 904
Query: 621 CGH-----------KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
C A FYH +DP +R +Q+ W D+I +I AT+AFGMGINK DVRF
Sbjct: 905 CERVAEGLQKHARISAGFYHAQLDPEKREEIQRDWMNDDIKVIVATLAFGMGINKRDVRF 964
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH ++PK +E ++QE GRAGR+G +SC+L+Y+Y D R H+I A+ G
Sbjct: 965 VIHCAMPKCLENFYQESGRAGRNGDEASCILFYNYHDKQRQSHLIQLNSADG---PSGCR 1021
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
R + + R N ENLL M++YCE + +CRR L HFGE F C CDNC +
Sbjct: 1022 RHDDGQASR----NEENLLPMLAYCEEEDECRRRFILRHFGEDF-RGTCAVACDNCRRRA 1076
Query: 790 SFIEKD----VTDTAKKLVELVKLTGQQFSS-----SHILEVFRGSLNQYVKKHRHETLS 840
+ + D ++++LV+ S S + ++ G N + E L
Sbjct: 1077 TRVGPPRVMRCADEVAQILDLVRRCKADCPSFPLTLSSLRDLLLGKRNTR-RGADVERLP 1135
Query: 841 LHG--AGKHLAKSEASRILRHLVIEDFLME 868
G A + + A R+L+ L+I L E
Sbjct: 1136 HFGLLAKRAWSPETAFRLLKRLIIHQILHE 1165
>gi|198427281|ref|XP_002131591.1| PREDICTED: similar to RECQL1 protein [Ciona intestinalis]
Length = 697
Score = 358 bits (920), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 205/529 (38%), Positives = 289/529 (54%), Gaps = 65/529 (12%)
Query: 367 DQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQ 426
D WSS +FPW+ +L+ + VF F P Q + IN+TMS DV ++M TGGGKSL +Q
Sbjct: 141 DVDWSSKNFPWSAELDKTLQDVFQIKHFHPVQLQAINSTMSKCDVLLIMSTGGGKSLCFQ 200
Query: 427 LPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY 486
LPA+I GITLV++PLVSL++DQ+++L Q I A L + + E+ + S +
Sbjct: 201 LPAIISKGITLVVTPLVSLMEDQVLNLKQYGIKAHMLKADSSMDDVMEVYDSMKSPNPQV 260
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
KL+YVTPEK++KS + L+ L+RI IDE HCVSQWG+DFRPDY+ LGILK+
Sbjct: 261 KLVYVTPEKISKSKQFMSHLDKCYKSGNLSRIAIDEVHCVSQWGNDFRPDYKMLGILKRL 320
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-------EKVAERL 599
+P+TP++ LTAT+T V D Q L + +C++FR R NL+ + +KV + +
Sbjct: 321 YPSTPIIGLTATSTNKVTFDTKQLLNIPDCLVFRTPLVRKNLFYEVRPKPTTHQKVVQDI 380
Query: 600 QVGLSYGHFFLLKEFYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDE 648
+ Y +S ++ G +AA YH +++ V +QW +E
Sbjct: 381 VTTIQENFKGESGIIYCISCRNCTDVCNSLIKSGIRAAVYHARCSAKKKSEVHQQWLNNE 440
Query: 649 INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFI 708
I +ICATVAFGMGINKP VRFVIHHS+ KS+E Y QE GRAGRDG+ S C+LY+ + D
Sbjct: 441 IQVICATVAFGMGINKPQVRFVIHHSISKSVENYFQEAGRAGRDGKPSLCLLYFGFWDVF 500
Query: 709 RVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVH 768
R M+ + T TENL ++V +C N CR L H
Sbjct: 501 RQTSMVFRE-----------------------RTGTENLSKVVKFCHNLKTCRVELLANH 537
Query: 769 FGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK--------LTGQQFSSSHIL 820
FGE + CD CS ++ +KDVT+ K L+ L+K LTG Q + I
Sbjct: 538 FGEVNEQCQSPGMCDVCSNLQKTTKKDVTEPCKVLLRLIKSNSMDGNRLTGIQLVDAAI- 596
Query: 821 EVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
R S N+ K K L++ E RI+ +++ FL E+
Sbjct: 597 ---RDSKNRKTK------------WKDLSRHEWQRIVFDMLVNGFLRED 630
>gi|153216100|ref|ZP_01950274.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 1587]
gi|124114476|gb|EAY33296.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 1587]
Length = 620
Score = 358 bits (919), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 229/652 (35%), Positives = 352/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMSIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|119773474|ref|YP_926214.1| ATP-dependent DNA helicase RecQ [Shewanella amazonensis SB2B]
gi|119765974|gb|ABL98544.1| ATP-dependent DNA helicase RecQ [Shewanella amazonensis SB2B]
Length = 607
Score = 358 bits (919), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 224/655 (34%), Positives = 350/655 (53%), Gaps = 85/655 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FRP QRE++ G D V+MPTGGGKSL YQ+PAL+ PG+TLV+SPL+SL
Sbjct: 18 QQVFGYRDFRPGQREVMTRVCQGEDCLVIMPTGGGKSLCYQVPALVLPGVTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+Q+ + A +L+ + + E+LR+L + + KLLYV+PE++ + D L R
Sbjct: 78 MKDQVDSLIQSGVAAAYLNSSQPREQAIEVLRQLR--FGELKLLYVSPERLLQGDFLSR- 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L+ ++ +DEAHC+S+WGHDFRP+Y LG LKQ+FP+ PV+ALTATA + +
Sbjct: 135 LDELH----ISLFAVDEAHCISEWGHDFRPEYAALGQLKQRFPHVPVMALTATADEATRS 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSLEC---- 621
+ + LG + SF+RPN+ VAE+L F ++ + C
Sbjct: 191 SICERLG-IQPFQHLASFDRPNIRY---TVAEKLNAANQLRQFIQSQKGANGIVYCSSRR 246
Query: 622 ------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
G A YH + +RA VQ ++ KD+I+++ ATVAFGMGINK +VRF
Sbjct: 247 RVDEVAERLRQQGFYAEGYHAGMTQDERASVQDRFLKDQIDVVVATVAFGMGINKSNVRF 306
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
V+H+ +PKSIE Y+QE GRAGRDG + +L + +D RV+H+I Q H
Sbjct: 307 VVHYDIPKSIESYYQETGRAGRDGLDAEALLLFDPADIGRVRHLIEQQEPGPQQQVEFHK 366
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-I 788
++ M ++ E CRR + L +FGE + C NC I
Sbjct: 367 LYS-----------------MAAFAEAQT-CRRQVLLHYFGEA-----ANEPCGNCDICI 403
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+ T+ A+K++ + Q+F +H++EV RGS V H+ LS G GK
Sbjct: 404 DPPKRYNGTEDAQKVLSCIYRLNQRFGVNHLIEVLRGSKAASVVDRGHDKLSTWGIGKEK 463
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ + R L+ +++ + S +++N S A ++ G ++L P
Sbjct: 464 STEYWLSVTRQLIHLGLASQDITR-------GSSVRLN-SAARPVLKGEVALMLAEP--- 512
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+LS SDV P + + PQ N KL++ L+ LR + +E
Sbjct: 513 ---RLSLSDV-------------PRKRTSSRTPQ-----NYDRKLFARLKNLRRTIAEE- 550
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ V Y +F +ATL ++ +P++E ELL +NG+G+ K++++G L+ I + I
Sbjct: 551 -QDVPPYLVFNDATLAEMAWMLPKSEAELLAVNGVGERKLARFGGEFLDEIAAYI 604
>gi|443429393|gb|AGC92678.1| ATP-dependent DNA helicase Q1-like protein [Heliconius erato]
Length = 632
Score = 358 bits (919), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 208/542 (38%), Positives = 284/542 (52%), Gaps = 67/542 (12%)
Query: 373 WD---FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WD + W+ ++ K VF +FRP Q INAT+SG V+MPTG GKSL YQLPA
Sbjct: 58 WDGNVYEWSDNVKKILKDVFKIETFRPKQLSAINATLSGQHTIVVMPTGAGKSLCYQLPA 117
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
L+ PG+T+VISPLVSL++DQ+ L IPA ++ E L L K KLL
Sbjct: 118 LVKPGLTIVISPLVSLMEDQVRSLKNKEIPAMLMTSTSSKEETSTALNALKDKNTKIKLL 177
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE++AKS + L+ A L RI IDE HC SQWGHDFRPDY+ LGIL FPN
Sbjct: 178 YVTPERLAKSKRFMANLQKCFAEGRLQRIAIDEVHCCSQWGHDFRPDYKYLGILTNMFPN 237
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM----------DCEKVAERL 599
P+L LTATATA V DV + L + C+I + +FNRPNL+ DC + E+L
Sbjct: 238 IPILGLTATATAHVLTDVQKMLSIQGCLIIKSTFNRPNLYYKILEKPTSQEDCLSILEKL 297
Query: 600 -------QVGLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ G+ Y + E L+ G + +YH +++ R+ V +W E
Sbjct: 298 LKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHATMEAKARSDVHMKWHAKEYQA 357
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
I ATVAFGMGI+KPDVRFVIHH++ KSIE Y+QE GRAGRDGQR+ CV Y D +V
Sbjct: 358 IVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDGQRAECVTLYRMQDIFKVS 417
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ V + ++L MV YC N CRRLL HF E
Sbjct: 418 SMVFSSVG-----------------------SMDHLYDMVKYCLNGSFCRRLLLAKHFDE 454
Query: 772 KFDSAHCKKTCDNCSKIKSFI-EKDVTDTAKKLVELV--------KLTGQQFSSSHILEV 822
+ C K CD C+ + E ++ + K + ++ KLT Q+ + L
Sbjct: 455 DWGDNDCNKMCDVCTNSNTTTREINLENHCKTISYIIDNASRQDTKLTAQKLLDAWFL-- 512
Query: 823 FRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV 882
+G + L G + ++S ++ L+IE +L+E+ + Y ++S +
Sbjct: 513 -KGPV----------PLRQKGKEPNFSRSIGEDVIAFLLIEGYLIEDFHYT-AYSTISYI 560
Query: 883 LK 884
K
Sbjct: 561 KK 562
>gi|117922195|ref|YP_871387.1| ATP-dependent DNA helicase RecQ [Shewanella sp. ANA-3]
gi|117614527|gb|ABK49981.1| ATP-dependent DNA helicase RecQ [Shewanella sp. ANA-3]
Length = 607
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 230/667 (34%), Positives = 352/667 (52%), Gaps = 89/667 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I SG D V+MPTGGGKSL YQLPAL+ P
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCSGEDCLVIMPTGGGKSLCYQLPALLMP 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ + + E+LR+L+ + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVNAAYLNSSQPREQSVEVLRQLHRG--ELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ D + R + SL L+ IDEAHC+SQWGHDFRP+Y LG LKQ FP+ P++
Sbjct: 124 ERLLTGDFIER-MRSLP----LSMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPHVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++++ + LG +N SF+RPN+ VAE+L F L +
Sbjct: 179 ALTATADQATRQNICERLG-INPFRLLSSFDRPNIRY---TVAEKLNAANQLRQFLLQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + P +R VQ + KD+I+I+ ATVA
Sbjct: 235 GSSGIVYCSSRRRVDEVAERLILQGFHAKAYHAGMTPQERGEVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVDFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIYRLGQRFGINHLIEVLRGSKGAAIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ LS G GK + ++R L+ +++ + S + +N S A ++ G
Sbjct: 452 DKLSTWGIGKDKSHEYWLSVIRQLIHLGLASQDITR-------GSSITLNPS-ARPILKG 503
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSS 956
++L P I T + K VT Q+ LN KL++
Sbjct: 504 EVALMLAEPR-IQLTNI-KRKVT----------------------QSRAPLNYDRKLFAR 539
Query: 957 LRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
L+ LR + +E + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G L
Sbjct: 540 LKALRRTIAEE--QDVPPYLVFNDATLAEMAAMMPTSPGEMLAVNGVGERKLSRFGDDFL 597
Query: 1017 ETIESTI 1023
+ I + +
Sbjct: 598 DEIAAYL 604
>gi|389795781|ref|ZP_10198890.1| ATP-dependent DNA helicase RecQ [Rhodanobacter fulvus Jip2]
gi|388430112|gb|EIL87306.1| ATP-dependent DNA helicase RecQ [Rhodanobacter fulvus Jip2]
Length = 605
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 235/655 (35%), Positives = 345/655 (52%), Gaps = 80/655 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+ ++ G D VLMPTGGGKSL YQ+PAL+ G +V+SPL++L
Sbjct: 10 QSVFGYPSFRGQQQAVVEHLGEGGDALVLMPTGGGKSLCYQVPALLRQGTGIVVSPLIAL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L +A + A FL+ ++ EQ+E+ R+L + + LLYV PE++ L Q
Sbjct: 70 MQDQVDALREAGVAAAFLNSSLAAGEQREVERQLEAG--ELNLLYVAPERLLTGR-FLAQ 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE R +A IDEAHCVSQWGHDFRP+Y+ L IL+++FP P +ALTATA +E
Sbjct: 127 LE----RTEVALFAIDEAHCVSQWGHDFRPEYRELAILQERFPQVPRIALTATADPRTRE 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE-----FYVVS-- 618
++V+ L L N F SF+RPN+ +V R G F L + Y +S
Sbjct: 183 EIVERLSLQNARQFVSSFDRPNIGY---RVGLRHNAKRQLGEFLLGHQGESGIVYCLSRR 239
Query: 619 ---------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
E G +A YH +D A RA QK++ +++ ++ ATVAFGMGI+KPDVRF
Sbjct: 240 KVDDTAAWLAESGVEALPYHAGLDAATRAKNQKRFLREDGVVMVATVAFGMGIDKPDVRF 299
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
V H LP+SIEGY+QE GRAGRDG + + Y SD + + MI+Q +
Sbjct: 300 VAHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTMSQMIAQSESAD-------- 351
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
RV E+LL +Y E DCRR L L FGE + C CDNC I
Sbjct: 352 -----ERKRVERQKLESLL---AYAEA-TDCRRQLLLGAFGESY-PGPCGH-CDNC--IA 398
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
D T A+K + V +GQ+F S H++++ RG + V+ H LS G G +
Sbjct: 399 PPKTWDATVPAQKALSAVYRSGQRFGSGHVIDILRGEETERVRSLGHHQLSTFGVGADMD 458
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ + + R L+ L + ++ YG++ + + ++ G ++V LR +
Sbjct: 459 EKQWRSVFRQLLAAGLLEAD---AEGYGTLRLT-----AASRGVLSGGESVKLREDARPE 510
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSA---KLYSSLRMLRTLLVK 966
+ D L++G S L + A ++ +LR +RT L K
Sbjct: 511 RAARRRRD-----SKLVTGGGS---------------LGIEAYEQDMWDALRAVRTQLAK 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ +GV Y +F +ATL + + +P TE+EL I+G+G+AK+ +YG L I +
Sbjct: 551 Q--QGVPPYVVFHDATLLAMLRALPTTEDELATISGVGEAKLKRYGRDFLAVINA 603
>gi|297570067|ref|YP_003691411.1| ATP-dependent DNA helicase RecQ [Desulfurivibrio alkaliphilus AHT2]
gi|296925982|gb|ADH86792.1| ATP-dependent DNA helicase RecQ [Desulfurivibrio alkaliphilus AHT2]
Length = 609
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 231/658 (35%), Positives = 347/658 (52%), Gaps = 73/658 (11%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
++E K VFG SFRP QREII ++G D FVLMPTGGGKSL YQLPAL PG+ +V+
Sbjct: 4 QIEQTLKDVFGFASFRPQQREIIEDLLAGRDAFVLMPTGGGKSLCYQLPALHRPGVAIVV 63
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL+SL++DQ+ L I A + +E E +++L L+ + LLYV PE++
Sbjct: 64 SPLISLMKDQVDALKAQGIKAACYNSALEAQEARQVLARLHGG--ELDLLYVAPERLMSE 121
Query: 500 DVL--LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
D L LR+L+ +A IDEAHCVSQWGHDFRP+Y LG L+QKFP P++ALTA
Sbjct: 122 DFLGRLRELQ-------IALFAIDEAHCVSQWGHDFRPEYIQLGRLRQKFPGIPLIALTA 174
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKV-----------AERLQVGLSY 605
TA ++D++ L L + SF+RPN+ + EK R + G+ Y
Sbjct: 175 TAEPHTRKDIIARLNLEKARCYLTSFDRPNIRYTVLEKKRPFNQLLDFLDGRREEAGIIY 234
Query: 606 GHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
E L E G AA YH + +R+ VQ+ + +D++ +I ATVAFGMGI+K
Sbjct: 235 CLSRKRVEQLTAKLQEAGFAAASYHAGLSGEERSRVQEAFLRDDLPLIVATVAFGMGIDK 294
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
++R+V+HH +PK+IEGY+QE GRAGRDG S +L + D + +I E+
Sbjct: 295 SNIRYVVHHDVPKNIEGYYQETGRAGRDGLNSEALLLFGMGDVALARGLIDNSQNEERRR 354
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
H L MV + + CRR + L +FGE +A C CD
Sbjct: 355 IENH-----------------KLAAMVGFAQA-TGCRRRVLLGYFGETL-AADC-GNCDT 394
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C +E VT+ A+K + + Q+F H+++V RGS NQ + + H LS +G
Sbjct: 395 CLDPPEMVE--VTEDARKALSCIYRVNQRFGLGHVVDVLRGSKNQRLLELGHHRLSTYGI 452
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G K +LRHL+ ++ ++V SVLK++QS + L+ G + +
Sbjct: 453 GADRDKDYWQALLRHLIHLGYVEQDVGN-------FSVLKLHQS-SRPLLRGEATLQMGR 504
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSA---KLYSSLRMLR 961
P + + A ++ +G S P+ L+A +++ LR LR
Sbjct: 505 P------RTKPAPTAEAGPTVAAGGKSGRAGKGPA--------GLAAADREIFEQLRRLR 550
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + +GV + +F +A L ++ + P+ ++E L+I+G+G+ K+ +YG R L I
Sbjct: 551 KEIADQ--DGVPPFVVFSDAALVAMATQQPKDDKEFLQIHGVGQYKLERYGERFLNAI 606
>gi|403364021|gb|EJY81760.1| ATP-dependent DNA helicase, RecQ family protein [Oxytricha
trifallax]
Length = 923
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 204/554 (36%), Positives = 305/554 (55%), Gaps = 54/554 (9%)
Query: 362 IEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGK 421
+E +W FPW + ++ N+KVF N +F NQREIINA ++G DV L+PTGGGK
Sbjct: 321 LENQGKNEWRDTKFPWDQHIQEFNQKVFRNKTFLENQREIINAALNGKDVMALIPTGGGK 380
Query: 422 SLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-- 479
SLT+QL AL+ G T VI PL++LI+DQI L + + + + +++ Q + +L
Sbjct: 381 SLTFQLTALMNNGYTFVIMPLIALIEDQIEQLRRLKVKCVYYNRSIK---QGQFYTDLLA 437
Query: 480 NSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQG 539
NSD KL+Y+TPEK+ ++ + L+ L +AR VIDE HCVS WG DFR DY+
Sbjct: 438 NSDPL-MKLIYLTPEKLVQTKPFINILDKLYQDNRIARFVIDEVHCVSHWGQDFRKDYRE 496
Query: 540 LGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL 599
L IL+ ++P P++ LTATAT +VK D+V+ L L N + F+ SFNRPNL + A ++
Sbjct: 497 LQILRMRYPTVPMIVLTATATIAVKYDIVKHLKLDNIVFFQSSFNRPNLLYEIRDKA-KI 555
Query: 600 QVGLSYGHFFLLKE---------FYVVS-LECGH----------KAAFYHGSIDPAQRAF 639
+ ++ LL++ Y +S EC K +YH ++ +R
Sbjct: 556 KKNIAEDIIMLLRDRKYVYQSGIIYCLSRTECEELCRELSEFDVKCDYYHAKMNENERRI 615
Query: 640 VQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCV 699
+Q++W ++EI+II AT+AFG+GINK DVRFVIH ++PKS+E Y QECGRAGRDG+ ++C+
Sbjct: 616 IQQRWMRNEIHIIIATIAFGLGINKRDVRFVIHTTIPKSLENYAQECGRAGRDGENANCI 675
Query: 700 LYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVD 759
LYYSY+D R++ I N N+ N L +++ +CE
Sbjct: 676 LYYSYADRKRLEFFIIS---------------NTENTAGRKNENLHALYKILEFCEEPYL 720
Query: 760 CRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQ---FSS 816
CRR + L + GE F S C CDNC K E D T+ A+ +V +V+ ++ +
Sbjct: 721 CRRKILLNYLGEDFKSKKCNNMCDNCRKGLRVAEIDFTEQARYVVAMVESALKKKMDLTL 780
Query: 817 SHILEVFRGSLNQYVKKHRHETL-------SLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
I + RG Q V + ++T S +G ++ RI+ L+I L E+
Sbjct: 781 IQICKFLRGK--QCVMSNPNKTTKMDEIKQSYYGRLSDYSEELIKRIVMRLLINKVLKEK 838
Query: 870 VKKSDVYGSVSSVL 883
V ++ L
Sbjct: 839 FNAYQVEATILVYL 852
>gi|254413079|ref|ZP_05026851.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
gi|196180243|gb|EDX75235.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
Length = 731
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 229/661 (34%), Positives = 368/661 (55%), Gaps = 83/661 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG +FRP Q++I+ + D+ ++MPTGGGKSL +QLPAL+ PG+T+V+SPL++L
Sbjct: 34 KQFFGYTTFRPGQQQIVEEALQNRDLLIIMPTGGGKSLCFQLPALLKPGLTVVVSPLIAL 93
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L+ I ATFL+ + W + RE+ K KLLYV PE++ ++
Sbjct: 94 MQDQVDALVDNGIGATFLNSTLSWDAVRS--REMAILNGKIKLLYVAPERLL-AERFAPF 150
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE + ++ ++ +DEAHCVS WGHDFRP+Y+ + L+Q++P+ P+LALTATAT V++
Sbjct: 151 LEQVRSQVGISAFAVDEAHCVSAWGHDFRPEYRQIKQLRQRYPDIPILALTATATKRVQQ 210
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERLQVGLSYGHFFLLKEFYV- 616
D+VQ L L I SFNRPNL+ + + ++ +++Q G + L V
Sbjct: 211 DIVQQLTLRQPSIHIASFNRPNLYYEIQPKQRQSYNQLFKKVQSHKGSGIIYCLSRRSVD 270
Query: 617 -VSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
V+ G A YH + R+ Q ++ +D++ +I AT+AFGMGINK DVRFVIH
Sbjct: 271 EVAFRLQKDGISALPYHAGMSDIDRSSNQNRFIRDDVQVIVATIAFGMGINKLDVRFVIH 330
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LP+++EGY+QE GRAGRDG+ + C ++Y D R+ ++I Q P
Sbjct: 331 YDLPRNLEGYYQESGRAGRDGEPAYCTIFYRPGDVPRLDYLIDQ--------KPDPREQR 382
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
VA + L ++ Y E DCRR + L +FGE+F +C CDNC K
Sbjct: 383 VAR---------QQLQQIRDYAEG-TDCRRTILLRYFGERF-KGNC-DNCDNCCHPKPV- 429
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+D T A+K + V ++F +HI++V RGS + V+++ H LS +G G+ +
Sbjct: 430 -EDWTIEAQKFLSCVARCRERFGMTHIIDVLRGSRKKKVEQNGHHLLSTYGIGRD-KSID 487
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
A ++L ++ LM+E +D Y VLK+N+ ++ ++ +++V + AI T
Sbjct: 488 AWKMLARSLLHQGLMDET--TDGY----RVLKLNK-RSWEVLRKQRSVHI----AITQTP 536
Query: 913 LSK--SDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
++K SDV+P E++L L+ LR LR + +
Sbjct: 537 VAKALSDVSPRTA--------------------EIEL-----LFERLRKLRKQIADI--Q 569
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTD 1030
V Y IF +++L+ +++ P+T EE +I+G+ K+++YG R + S ++EF +
Sbjct: 570 SVPPYVIFADSSLKLMARMKPKTLEEFAQISGVTAHKLTQYGERFV----SEVREFCQGQ 625
Query: 1031 K 1031
K
Sbjct: 626 K 626
>gi|409202724|ref|ZP_11230927.1| ATP-dependent DNA helicase [Pseudoalteromonas flavipulchra JG1]
Length = 607
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 222/656 (33%), Positives = 341/656 (51%), Gaps = 87/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG +FR Q +II ++++G D VL+PTGGGKSL YQ+PA++ G+T+VISPL+SL
Sbjct: 20 KDVFGYSTFRDGQLDIIQSSLAGQDTLVLLPTGGGKSLCYQVPAVLFAGVTIVISPLISL 79
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L I A +++ ++ W +Q++ L + KLLYV PEK + D + R
Sbjct: 80 MQDQVAQLKAQGIAAEYINNSVAWEQQRDTYDALFQG--RLKLLYVAPEKALQRDFIER- 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ + N ++ IDEAHCVS WGHDFRP Y L L+Q FP+ P++ALTATA + ++
Sbjct: 137 ISNCN----ISLFAIDEAHCVSHWGHDFRPHYFRLKELRQHFPSVPMMALTATADLATRK 192
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL------------QVGLSY-GHFFLLK 612
D+VQ LG+ I+ SF+RPN+ E+ + L Q G+ Y G +
Sbjct: 193 DIVQQLGMQAPFIYTGSFDRPNIRYTIEEKFKPLSQLIRYLKEQKGQSGIIYCGSRKRVD 252
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+ ++ G AA YH +D QR FVQ ++++D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 253 DIAEKLIDAGFNAAGYHAGLDNDQRQFVQNRFARDDIQIVVATVAFGMGINKPNVRFVVH 312
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PKS+E Y+QE GRAGRD + V+Y+ +D RV+ P R
Sbjct: 313 YDIPKSVEAYYQETGRAGRDSLAAEAVMYFDPADIPRVRRFFED--------IPDEQRRK 364
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
V + M S+ E CRR + L +F E + ++ C NC
Sbjct: 365 V---------EEQRFQAMSSFAEAQT-CRRQILLNYFSE-----YQREACGNCDICLNPP 409
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T A++ + V Q+F S+I+++ RG+ +++ H TLS +G GK
Sbjct: 410 KQF---DGTLVAQQALSCVYRAEQRFGISYIVDILRGANTARIREQNHHTLSTYGIGKEH 466
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ILR L+ L +++ Q LR A
Sbjct: 467 SNEFWLSILRQLIHHGLLSQDIT--------------------------QGATLRLTEAA 500
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + + A+ L++ + D +Q N KL++ LR LR L E
Sbjct: 501 RAVLRGEYVLQLAEPRLVAKHVY---QDKLAQ------FNYDKKLFAKLRALRKQLADE- 550
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
+ V Y +F + TL +++R P T+ E L+++G+G K+SKYG ++ I + ++
Sbjct: 551 -DDVPPYVVFNDRTLAEMAQRTPTTDSEFLQVSGVGFTKLSKYGAPFMQLIRNYLE 605
>gi|114045876|ref|YP_736426.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-7]
gi|113887318|gb|ABI41369.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-7]
Length = 607
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 231/667 (34%), Positives = 355/667 (53%), Gaps = 89/667 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I SG D V+MPTGGGKSL YQLPAL+ P
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCSGEDCLVIMPTGGGKSLCYQLPALLMP 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ + + E+LR+L+ + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVNAAYLNSSQPREQSLEVLRQLHRG--ELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R + SL L+ IDEAHC+SQWGHDFRP+Y LG LKQ FP P++
Sbjct: 124 ERLLTADFIER-MRSLP----LSMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPLVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++++ + LG +N SF+RPN+ VAE+L F L +
Sbjct: 179 ALTATADQATRQNICERLG-INPFKLLSSFDRPNIRY---TVAEKLNAANQLRQFLLQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + P +R VQ + KD+I+I+ ATVA
Sbjct: 235 GSSGIVYCSSRRRVDEVAERLTLQGFHAKAYHAGMTPQERGEVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVDFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIYRLGQRFGINHLIEVLRGSKGAAIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ LS G GK + ++R L+ +++ + S + +N S A ++ G
Sbjct: 452 DKLSTWGIGKDKSHEYWLSVIRQLIHLGLASQDITR-------GSSITLNPS-ARPILKG 503
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSS 956
++L P I T + + K++ SR TP LN KL++
Sbjct: 504 DVALMLAEPR-IQLTNIKR-------------KVTQSR--TP--------LNYDRKLFAR 539
Query: 957 LRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
L+ LR + +E + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G L
Sbjct: 540 LKALRRTIAEE--QDVPPYLVFNDATLAEMAAMMPTSPGEMLAVNGVGERKLSRFGDDFL 597
Query: 1017 ETIESTI 1023
+ I + +
Sbjct: 598 DEIAAYL 604
>gi|354595778|ref|ZP_09013795.1| ATP-dependent DNA helicase RecQ [Brenneria sp. EniD312]
gi|353673713|gb|EHD19746.1| ATP-dependent DNA helicase RecQ [Brenneria sp. EniD312]
Length = 610
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 226/655 (34%), Positives = 345/655 (52%), Gaps = 85/655 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATISGRDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q E++ S + KLLY+ PE++ +D L
Sbjct: 78 MKDQVDQLQAYGVSAACLNSTQTREQQHEVMAGCRSG--QIKLLYIAPERLT-TDSFLDH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L ++ R L I +DEAHC+SQWGHDFRP+Y+ LG +KQ FP PV+ALTATA + +
Sbjct: 135 L--IHWRPSL--IAVDEAHCISQWGHDFRPEYRALGQVKQHFPGLPVIALTATADETTRS 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + ++ SF+RPN LWM + +R + G+ Y +
Sbjct: 191 DIVRLLDLQSPLVQISSFDRPNIRYTLVEKFKPLDQLWMFVQ--GQRGKSGIIYCNSRAK 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDISARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 309 VHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA--HCKKTCDNCSKI 788
+G+ L+ L M ++ E CRRL+ L +FGE A +C D +
Sbjct: 357 -----AGQQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQQACGNCDICLDPPKRY 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+E A+K + V GQ+F +I+EV RG+ NQ +++ H+ L ++G G+
Sbjct: 411 DGLVE------AQKALSCVYRVGQRFGMGYIVEVLRGANNQRIREFAHDKLPVYGIGRDK 464
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
++ +LR L+ L + + + S L++ +S A ++ G + L P I
Sbjct: 465 SQEHWVSVLRQLIHLGLLQQNIAQ-------YSALQLTES-ARPVLRGEVPLQLAVPRVI 516
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
N + P S Q N KL++ LR LR + EA
Sbjct: 517 N--------LKPRAAS-----------------QKSYGGNYDRKLFAKLRKLRKSIADEA 551
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++ +P T ELL ING+G K+ ++G + I +
Sbjct: 552 --NIPPYVVFSDATLLEMAELMPITAAELLNINGVGHRKLERFGAPFMSVIRDHV 604
>gi|291228382|ref|XP_002734149.1| PREDICTED: RecQ protein-like (DNA helicase Q1-like)-like
[Saccoglossus kowalevskii]
Length = 785
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 223/628 (35%), Positives = 341/628 (54%), Gaps = 88/628 (14%)
Query: 345 YPVEREPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINA 404
+ +ERE I KI K + D K++ DFPW+KKL+ ++ VF +RP+Q E +NA
Sbjct: 43 HDLERE--IAKIQKGGSVVSKGD-KFNGNDFPWSKKLDELSRSVFKIDEYRPHQLEAMNA 99
Query: 405 TMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLS 464
T+SG D+ ++MPTG GKSL +QLPALI GITLV+SPLVSL++DQ+M L + L+
Sbjct: 100 TLSGRDLILIMPTGSGKSLCFQLPALISKGITLVVSPLVSLMEDQLMSLDMCGVNGALLN 159
Query: 465 GNMEWTEQQEILRELNSDYCK-YKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEA 523
+ + + + + + + K+LYVTPEK+AKS + + +LE + ARIVIDE
Sbjct: 160 ADSTKEHKNYVHKCMIDPHSQDLKILYVTPEKIAKSKMFMSKLEKMYKAGKFARIVIDEV 219
Query: 524 HCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSF 583
HC SQWGHDFR DY+ LGILK++FP P+L LTATAT + +DV L + C+ R S+
Sbjct: 220 HCCSQWGHDFRRDYKVLGILKRQFPEVPLLGLTATATQHILDDVKNLLNVPYCMTMRASY 279
Query: 584 NRPNLWMDC--------EKVAE---------RLQVGLSYGHFFLLKEFYVVSLEC---GH 623
+RPNL+ + E VAE + Q+G+ Y F K+ ++ + G
Sbjct: 280 DRPNLYYEVRRKPKKHEECVAEISKLLNGKFKGQIGIIY--CFSRKDCETIAADLRKGGI 337
Query: 624 KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYH 683
+A YH ID ++R+ + + W+K+ I ++ AT+AFGMGI+KP+VRFVIHH++ KS+E Y+
Sbjct: 338 EALPYHSDIDSSRRSQIHRAWAKETIQVVVATIAFGMGIDKPNVRFVIHHTMSKSVENYY 397
Query: 684 QECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETN 743
QE GRAGRDG + C+L+ + D R M+ + ET
Sbjct: 398 QESGRAGRDGLPAYCILFLGFGDIFRQSTMV------------------------LTETQ 433
Query: 744 T--ENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE-------- 793
T +NL MV YC N CRR L HFGE +D + C CDNC ++K E
Sbjct: 434 TALDNLYNMVRYCTNIERCRRSLIARHFGESWDFSQCSGMCDNC-RLKRKSEDSSCALTQ 492
Query: 794 -KDVTDTAKKLVELVKLTGQQ---FSSSHILEVF--RG-SLNQYVKKHRHETLSLHGAGK 846
+D+T + L ++ Q +++ +++++ RG S +K +
Sbjct: 493 NRDITGHCQTLYTILNKAASQDKKLTANKLVDIWMKRGPSAELRIKDQK---------AP 543
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV-------LKVNQSKAHNLII-GRQ 898
+ + I+ HL++E +L E+ + Y ++S V L + K+ L + ++
Sbjct: 544 FVTDARCEDIVCHLLLEGYLREDYHFTP-YTTISYVQPGTKEKLVTSMGKSIELTLRTKE 602
Query: 899 NVVLRFPSAINSTKLSKS--DVTPAKGS 924
V P ++ K+ K DV P++ S
Sbjct: 603 QKVYDLPDLVSEVKVQKRSVDVKPSEAS 630
>gi|389775051|ref|ZP_10193137.1| ATP-dependent DNA helicase RecQ [Rhodanobacter spathiphylli B39]
gi|388437716|gb|EIL94498.1| ATP-dependent DNA helicase RecQ [Rhodanobacter spathiphylli B39]
Length = 608
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 235/656 (35%), Positives = 342/656 (52%), Gaps = 76/656 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+ ++ G D VLMPTGGGKSL YQ+PAL+ G +V+SPL++L
Sbjct: 9 QSVFGYPSFRGQQQAVVEHLGEGGDALVLMPTGGGKSLCYQIPALLRQGTGIVVSPLIAL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L +A + A FL+ ++ +Q+E+ R+L + + LLYV PE++ S L
Sbjct: 69 MQDQVDALREAGVAAAFLNSSLAGDQQREVERQLLAG--ELNLLYVAPERLLTSRFL--- 123
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L R +A IDEAHCVSQWGHDFRP+Y+ L IL Q+FP P +ALTATA +E
Sbjct: 124 --DLLERTEVALFAIDEAHCVSQWGHDFRPEYRELAILHQRFPEVPRIALTATADPRTRE 181
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE-----FYVVS-- 618
++V+ L L + F SF+RPN+ +V +R G F L E Y +S
Sbjct: 182 EIVERLSLQDARQFVSSFDRPNIGY---RVGQRHNAKRQLGEFLLGHEGESGIVYCLSRR 238
Query: 619 ---------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
E G +A YH +D A RA Q+++ +++ ++ ATVAFGMGI+KPDVRF
Sbjct: 239 KVDDTAAWLAESGIEALPYHAGLDAATRAKNQQRFLREDGVVMVATVAFGMGIDKPDVRF 298
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
V H LP+SIEGY+QE GRAGRDG + + Y SD + + MI+Q +
Sbjct: 299 VAHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTMSQMIAQSESAD-------- 350
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
RV E+LL +Y E +DCRR L L FGE + C CDNC I
Sbjct: 351 -----ERKRVERQKLESLL---AYAEA-IDCRRQLLLGAFGESY-PGPCGH-CDNC--IA 397
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
D T A+K + V TGQ+F S H++ V RG ++ V H LS G G L
Sbjct: 398 PPKTWDATVPAQKALSAVYRTGQRFGSGHVIAVLRGEESERVLSFDHHRLSTFGIGAELD 457
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ + R L+ L + ++ YG++ + + ++ G + V LR +
Sbjct: 458 DKQWRSVFRQLLAAGLLEAD---AEGYGTLRLT-----AASRAVLSGGKPVRLREDARPE 509
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSA---KLYSSLRMLRTLLVK 966
+ D L++G P++ L + A ++ LR LRT L K
Sbjct: 510 CATRRRRD-----SKLVTGD-----------PRHGGSLGIEAYEQPMWDQLRALRTQLAK 553
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ +GV Y +F +ATL + + +P E+EL ++G+G+AK+ +YG L I +
Sbjct: 554 Q--QGVPPYVVFHDATLLAMLRALPANEDELASVSGVGEAKLKRYGRDFLAVINAA 607
>gi|434399695|ref|YP_007133699.1| ATP-dependent DNA helicase RecQ [Stanieria cyanosphaera PCC 7437]
gi|428270792|gb|AFZ36733.1| ATP-dependent DNA helicase RecQ [Stanieria cyanosphaera PCC 7437]
Length = 708
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 226/660 (34%), Positives = 358/660 (54%), Gaps = 85/660 (12%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
+LE K FG SFRP Q+EII T++ D+ ++MPTGGGKSL +QLPAL+ PG+TLV+
Sbjct: 3 RLEKALKHYFGYDSFRPGQKEIIEETLNNQDLLIIMPTGGGKSLCFQLPALLKPGLTLVV 62
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDY-----CKYKLLYVTPE 494
SPL++L+QDQ+ L I ATFL+ +++ E+ S Y K KLLYV PE
Sbjct: 63 SPLIALMQDQVDALKDRGIDATFLNSTLDY-------EEMRSRYGAILQGKIKLLYVAPE 115
Query: 495 KVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLA 554
++ ++ L+ + ++ I IDEAHC+S+WGHDFRP+Y+ L +Q++P P+LA
Sbjct: 116 RLL-AEKFRTFLDKIANNIGISTIAIDEAHCISEWGHDFRPEYRQLKQFRQRYPQVPLLA 174
Query: 555 LTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE----------RLQVGLS 604
LTATAT V++D+++ LGL N + SFNR N+ + + R Q G
Sbjct: 175 LTATATKRVQQDIIEQLGLQNPSVHLNSFNRFNIHYQVQPKQQRSYHQLLQEIRSQSGAG 234
Query: 605 YGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
+ + V+ + G KA YH + +R Q ++ +D++ ++ AT+AFGMG
Sbjct: 235 IVYCLSRRNVEEVAYKLQKDGIKALPYHAGMTDEKRTINQTRFLRDDVQVMVATIAFGMG 294
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
INKPDVRFV H+ LP+S+E ++QE GRAGRDG+ ++ +L++S D+ ++ ++I EQ
Sbjct: 295 INKPDVRFVFHYDLPRSLENFYQESGRAGRDGESATSILFFSMGDWKKIDYLI-----EQ 349
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
P P R + L +++ Y E VDCRR + L +FGE+F S +C +
Sbjct: 350 KP-DPQEQRI-----------ARQQLNQVIDYAEG-VDCRRTILLRYFGERF-SGNCGQ- 394
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CDNC + +D T A+K + V ++F HI+EV RGS N+ V+++ H LS
Sbjct: 395 CDNC--LNPHPIEDWTIEAQKFLSCVARCQEKFGMKHIIEVLRGSRNKKVEQYGHHLLST 452
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+G GK K E ++R L+ + + + +D Y +LK+N+ R +
Sbjct: 453 YGIGKDKTKDEWKMLVRSLLNQGLVSQS---NDGY----RILKLNK---------RSWEI 496
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
LR + V A + + + P N P Q + E+ LY L+ LR
Sbjct: 497 LR----------KQRTVEIAVKNKIDSQTKPQNN--PYQAEKEI-------LYEQLKKLR 537
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ + Y IF +++L+ +++ P+T E+ I+G+ K+ +YG + + I +
Sbjct: 538 KQIADL--HSIPPYIIFADSSLKLMAQLQPQTLEDFASISGVNDYKLQQYGEQFISLIRT 595
>gi|297581635|ref|ZP_06943557.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC385]
gi|297534042|gb|EFH72881.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC385]
Length = 620
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 229/652 (35%), Positives = 351/652 (53%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 31 EVFGYQQFRVGQQEVIEAALAGCDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 90
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 91 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 147
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 148 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 203
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK +R Q G+ Y E
Sbjct: 204 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 263
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 264 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 322
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+ E GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 323 FDIPRNIESYYHETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 368
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 369 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 419
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 420 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 476
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G N+ L P
Sbjct: 477 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMNIELAVPRLD 528
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 529 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 562
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 563 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 613
>gi|419827881|ref|ZP_14351373.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-1A2]
gi|419831541|ref|ZP_14355010.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A2]
gi|422915915|ref|ZP_16950269.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02A1]
gi|423810983|ref|ZP_17714862.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55C2]
gi|423846250|ref|ZP_17718634.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59A1]
gi|423878417|ref|ZP_17722265.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-60A1]
gi|423996324|ref|ZP_17739601.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02C1]
gi|424015029|ref|ZP_17754887.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55B2]
gi|424018140|ref|ZP_17757952.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59B1]
gi|424623518|ref|ZP_18062004.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A1]
gi|424628094|ref|ZP_18066413.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-51A1]
gi|424632040|ref|ZP_18070170.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-52A1]
gi|424635129|ref|ZP_18073161.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55A1]
gi|424638950|ref|ZP_18076857.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A1]
gi|424647207|ref|ZP_18084895.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A1]
gi|443526077|ref|ZP_21092179.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-78A1]
gi|341641612|gb|EGS66137.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02A1]
gi|408017262|gb|EKG54777.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A1]
gi|408022773|gb|EKG59966.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-52A1]
gi|408028170|gb|EKG65081.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A1]
gi|408028453|gb|EKG65344.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55A1]
gi|408038274|gb|EKG74625.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A1]
gi|408059843|gb|EKG94584.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-51A1]
gi|408624245|gb|EKK97194.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-1A2]
gi|408637259|gb|EKL09328.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55C2]
gi|408644873|gb|EKL16546.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-60A1]
gi|408646151|gb|EKL17772.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59A1]
gi|408652428|gb|EKL23643.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A2]
gi|408855314|gb|EKL95021.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02C1]
gi|408862584|gb|EKM02091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55B2]
gi|408871261|gb|EKM10504.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59B1]
gi|443455544|gb|ELT19309.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-78A1]
Length = 611
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 229/652 (35%), Positives = 354/652 (54%), Gaps = 87/652 (13%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL+
Sbjct: 22 EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + E I +++ + KLLYV+PE+V ++ + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAG--QLKLLYVSPERVLTAEFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FPN PV+ALTATA + + D
Sbjct: 139 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEK---VAERL--------QVGLSYGHFFLLKEF 614
++Q L L + SF+RPN+ +M EK V++ + Q G+ Y E
Sbjct: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQHGQCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L CG+ +AA YH +D +RA+VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKL-CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-----DEKP--------- 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
G + + L M ++ E CRR + L +FGE D K C NC
Sbjct: 360 ---DGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ ++ +G G+
Sbjct: 411 KRF---DATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 468 SHDYWVSIFRQLIHKGMLYQNITR-------NSTLQLTE-EARPLLRGEMSIELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD LSGK N KL++ LR LR + +
Sbjct: 520 TAARAAKSDK-------LSGK------------------NYDKKLFAKLRKLRKSIADD- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 -EGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|428201759|ref|YP_007080348.1| ATP-dependent DNA helicase RecQ [Pleurocapsa sp. PCC 7327]
gi|427979191|gb|AFY76791.1| ATP-dependent DNA helicase RecQ [Pleurocapsa sp. PCC 7327]
Length = 708
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 231/670 (34%), Positives = 354/670 (52%), Gaps = 91/670 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LEA K FG FRP QR+I+ + D+ V+MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 7 LEAALKHFFGYEHFRPGQRKIVEEALQNRDLLVIMPTGGGKSLCFQLPALLKPGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QD++ L I ATFL+ ++ + E + RE K KLLYV PE++
Sbjct: 67 PLIALMQDRVDALQDNGIGATFLNSSLTFPEVRS--RETAILDGKIKLLYVAPERLLSER 124
Query: 501 VLLRQLESLNAREL-LARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
R L A ++ + IDEAHCVS+WGHDFRP+Y+ L L+Q++P+ P+ ALTATA
Sbjct: 125 --FRNFLDLAATKISITAFAIDEAHCVSEWGHDFRPEYRQLIQLRQRYPHVPMFALTATA 182
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE------ 613
T V+ED++Q LGL I SFNRPN++ + + R SY L
Sbjct: 183 TKRVQEDIIQQLGLRQPGIHLASFNRPNIYYEVQPKERR-----SYNQLLKLIRTQQGSG 237
Query: 614 -FYVVSLECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
Y +S + AF YH I R Q ++ +D++ +I AT+AFGMG
Sbjct: 238 IVYCLSRRNVDEIAFRLQKDGISTVPYHAGITDEARTLNQTRFIRDDVKVIVATIAFGMG 297
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
I+KPDVRFVIH+ LP+++E Y+QE GRAGRDG+ ++C L+ S DF R++++I Q
Sbjct: 298 IDKPDVRFVIHYDLPRNLESYYQESGRAGRDGEPANCTLFLSLGDFKRIEYIIDQKS--- 354
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
P R + L ++++Y E +CRR + L +FGE+F +C +
Sbjct: 355 ---DPQEQRI-----------ARQQLRQVINYAEG-TECRRTIILRYFGERF-PGNC-AS 397
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CDNC K +D T A+K + V T ++F HI++V RGS + ++++ H LS
Sbjct: 398 CDNCRNPKPI--EDWTIEAQKFLSCVARTQERFGMMHIIDVLRGSSKRKIEEYGHHLLST 455
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+G GK E + R L+ + + E +D Y VLK+N+ ++ ++ ++V
Sbjct: 456 YGIGKGKTVEEWKMLGRSLIHQGLVDE---TTDGY----PVLKLNK-RSWEILRKMRSVQ 507
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
+ + NS L + A+ +L +L R A L+S
Sbjct: 508 IAVTAPSNSKVLESYNPRAAEVEILLERLKQLRKQI-------------ADLHS------ 548
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ Y IF + +L+ +++ P+T +E +I+G+G K+ +YG E S
Sbjct: 549 ----------LPPYVIFSDYSLKLMAQMQPKTLQEFAKISGVGAHKLERYG----EQFVS 594
Query: 1022 TIKEFYKTDK 1031
I+ FY+ K
Sbjct: 595 EIRAFYQEQK 604
>gi|359474777|ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis vinifera]
Length = 711
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 250/673 (37%), Positives = 340/673 (50%), Gaps = 92/673 (13%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ WS F W + + +FG ++R NQREIINA MSG DV V+M GGGKSL YQL
Sbjct: 65 ENWSG-PFDWDAQADDVRFNIFGISTYRANQREIINAVMSGRDVLVIMAAGGGKSLCYQL 123
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA++ G+ LV+SPL+SLIQDQ+M L IPA L+ +++ I + L K
Sbjct: 124 PAILRDGVALVVSPLLSLIQDQVMGLAALGIPAYMLTSTTSKEDEKFIYKALEKGDGDLK 183
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
+LYVTPEK++KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ LGILK +F
Sbjct: 184 ILYVTPEKISKSKRFVSKLEKCHHSGCLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 243
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEK----------VA 596
P+ PV+ALTATAT V+ D+++ L + CI F + NRPNL +M EK +A
Sbjct: 244 PDVPVVALTATATKKVQNDLMEMLHIPKCIKFVSTVNRPNLFYMVREKSSVGRVVIDEIA 303
Query: 597 ERLQ-------VGLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSK 646
E +Q G+ Y F KE V+ E G A +YH +D R V +WS
Sbjct: 304 EYIQESYPNNESGIVY--CFSRKECEQVAKELRERGISADYYHADMDVNARERVHLRWSN 361
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LY+ D
Sbjct: 362 SKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGD 421
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R M+ NSG +NL +V YC++ +CRR
Sbjct: 422 VPRQSSMVF-----------------YENSG------LQNLYDIVQYCQSKRECRRNAFF 458
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E C CDNC+ E DV+ AK ++ L L Q + R +
Sbjct: 459 RHFAEPLQD--CNGMCDNCAFSTEVKEVDVSCLAKAMISL--LQDMQDNDQ------RLT 508
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVN 886
+ Q V K + + L G L K E ++ L+ + L EE + + + L +
Sbjct: 509 MLQMVDKMKVKNKDL---GSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLL 565
Query: 887 QSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVD 946
+ + G++ V L STK V G++ S K S +
Sbjct: 566 WKQVSH---GKRIVKLEI-----STK-----VKTKTGNMKSSKRSLT------------- 599
Query: 947 LNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKA 1006
S+ L L LR L G G+ + + + LS + P + EL + IGK
Sbjct: 600 ---SSGLELKLDELRKELSSTHG-GIFPHSVLSTQQISILSAQKPTSILELETM--IGKL 653
Query: 1007 KVSKYGVRLLETI 1019
K KYG ++LE I
Sbjct: 654 KTEKYGSKILEEI 666
>gi|269103722|ref|ZP_06156419.1| ATP-dependent DNA helicase RecQ [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163620|gb|EEZ42116.1| ATP-dependent DNA helicase RecQ [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 613
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 232/667 (34%), Positives = 350/667 (52%), Gaps = 85/667 (12%)
Query: 371 SSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPAL 430
S D P + + + VFG FR Q++II ++ D V+MPTGGGKSL YQ+PAL
Sbjct: 5 SFCDHPTLAQAQTLLEDVFGYQQFRDGQQDIITTALNRSDSLVIMPTGGGKSLCYQIPAL 64
Query: 431 ICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
+ G+TLVISPL+SL++DQ+ L+ I A + + E + + +L S + KLLY
Sbjct: 65 LLDGLTLVISPLISLMKDQVDQLVANGIQAACIHSALTRDEIETVFSQLESG--ELKLLY 122
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
V+PE+V D + R L+ + LA + +DEAHC+SQWGHDFRP+Y LG LKQ F
Sbjct: 123 VSPERVLMRDFIAR-LQQVK----LALLAVDEAHCISQWGHDFRPEYAELGQLKQMFAPL 177
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAER 598
PV+ALTATA + ++D++ L L I SF+RPN+ + EK + R
Sbjct: 178 PVMALTATADETTRQDIISRLALEQPHIHLGSFDRPNIRYTLLEKYKPLSQLLSYLASVR 237
Query: 599 LQVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
Q G+ Y + E L E G +AA YH + RA+VQ+ + +D+I+I+ ATVA
Sbjct: 238 GQCGIIYCNSRKRVEQICEKLCENGLRAAAYHAGMSVNDRAYVQEAFQRDDIHIVVATVA 297
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINKP+VRFVIHH +P++IE Y+QE GRAGRDG + VL Y +D ++ +
Sbjct: 298 FGMGINKPNVRFVIHHDIPRNIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL--- 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
++ P G E L M + E CRR + L +FG+ H
Sbjct: 355 --DEKP------------DGATREVEEHKLNAMRDFAEAQT-CRRQVLLHYFGQ-----H 394
Query: 778 CKKTCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKK 833
+K C NC K F + T+ A+K + V Q F +HI+EV RG N ++
Sbjct: 395 SEKPCGNCDICLDPPKQF---NATEVAQKALSCVYRVQQSFGVNHIIEVLRGMQNHRIRD 451
Query: 834 HRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNL 893
H HE LS +G G+ + +LR L+ L++ +++ +S L++ + ++ ++
Sbjct: 452 HGHELLSTYGIGRDFSHEYWLSVLRQLIHRGLLVQNIQR-------NSTLQLTE-QSRSV 503
Query: 894 IIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKL 953
+ G ++L P + + +K D KL+ D KL
Sbjct: 504 LRGEVELMLAVPRLDTAARTAKHD-----------KLAQRHYDK--------------KL 538
Query: 954 YSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGV 1013
++ LR LR + + E + Y +F + +L +++R+P + E L ING+G+ K+ KYG
Sbjct: 539 FAKLRKLRKAIADD--ENLPPYVVFNDVSLMEMAERLPTSHGEFLAINGVGQRKLEKYGQ 596
Query: 1014 RLLETIE 1020
LE IE
Sbjct: 597 VFLELIE 603
>gi|148266306|ref|YP_001233012.1| ATP-dependent DNA helicase RecQ [Geobacter uraniireducens Rf4]
gi|146399806|gb|ABQ28439.1| ATP-dependent DNA helicase RecQ [Geobacter uraniireducens Rf4]
Length = 715
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 233/654 (35%), Positives = 343/654 (52%), Gaps = 81/654 (12%)
Query: 382 EANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISP 441
+A KVFG ++FR Q+EI+ + G D FV+MPTGGGKSL YQ+PAL PG+ +V+SP
Sbjct: 6 QATLLKVFGYNTFRQPQQEIVEGLIRGDDAFVIMPTGGGKSLCYQIPALHRPGVGIVVSP 65
Query: 442 LVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDV 501
L+SL++DQ+ L + A F + ++ E + +L EL++ L+YV PE++ S+
Sbjct: 66 LISLMKDQVDALRANGVRAAFYNSSLGEVEARRVLAELHNQ--ALDLIYVAPERL-MSEP 122
Query: 502 LLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATA 561
L +L+ + +A IDEAHCVSQWGHDFRP+Y LG L++ FP P++ALTATA A
Sbjct: 123 FLERLKEME----IALFAIDEAHCVSQWGHDFRPEYVQLGRLRRLFPQVPMIALTATADA 178
Query: 562 SVKEDVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS------YGHFFLLK 612
+ D+++ LGL F+RPN+ M+ +K +L L+ G + L
Sbjct: 179 QTRGDIIERLGLQGAACHVAGFDRPNIRYTVMEKQKPFVQLTTFLAGRGRDEAGIVYALS 238
Query: 613 EFYVVSLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + G AA YH + +R+ VQ+ + +DE+ ++ ATVAFGMGI+KP+V
Sbjct: 239 RKRVEEVAERLSAAGIAAAPYHAGLPDRERSRVQEAFQRDELQVVVATVAFGMGIDKPNV 298
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGV-AEQSPFTP 726
RFV+H+ LPK+IE Y+QE GR+GRDG + +L + Y D + +I G AEQ
Sbjct: 299 RFVVHYDLPKNIESYYQETGRSGRDGLPAEALLLFGYGDIAVARSLIENGGNAEQ----- 353
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
NR + L MV + E V CRR + L +FG A + C NC
Sbjct: 354 --NRIEL-----------HKLNAMVGFAEA-VTCRRRVLLGYFG-----ATLAEDCGNCD 394
Query: 787 K-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
IK D T+ A+K + V GQ+F H+++V RGS NQ ++ H+ LS +G G
Sbjct: 395 ICIKPPERYDATEEAQKALSCVYRVGQRFGMGHVIDVLRGSHNQRIQTLGHDKLSTYGIG 454
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
+ L+ I R LV +L +++ + SVLK+ +KA L+ G + + L P
Sbjct: 455 RGLSSDIWGSIFRQLVHLGYLEQDL-------AAYSVLKLT-AKARPLLRGEERLTLARP 506
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
A + T G+ G L+ SLR LR L
Sbjct: 507 RAKAIPVKNAPRTTATGGAYDEG------------------------LFQSLRALRKQLA 542
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+A GV + +FG+ATL ++ P E LL I+G+G K+ +YG L I
Sbjct: 543 DDA--GVPPFVVFGDATLAEMALARPHDAEALLRISGVGVHKLGRYGADFLAVI 594
>gi|281206277|gb|EFA80466.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 842
Score = 357 bits (915), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/442 (42%), Positives = 271/442 (61%), Gaps = 35/442 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
FPW + +E N+ VFGN RP Q + IN+ + D FV +PTGGGKSL +QLPA+I G
Sbjct: 375 FPWDRFVEGCNRLVFGNERLRPLQSDAINSVLYRRDTFVSLPTGGGKSLCFQLPAIIDSG 434
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYCKYKLLYVTP 493
+TLVISPL++L+ DQ+ LLQ +P L+ ++ +E+++I++EL + C YKLLYVTP
Sbjct: 435 VTLVISPLLALMFDQLSKLLQLGVPTCALNSSVPVSEKKKIIKELLDPAGCPYKLLYVTP 494
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ K+ + LE LN L R+VIDEAHC+S+WGHDFR DY+ L ++ FPN P++
Sbjct: 495 ERM-KTQEFIDILEHLNNTSQLKRLVIDEAHCISEWGHDFRKDYRKLSKFREMFPNIPIV 553
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATAT V+ D+ Q L + N I R SF R NL + K + + + + F+ +
Sbjct: 554 ALTATATPKVELDIKQQLSMHNTINIRGSFIRSNLKYEVRKKSTEPEFCFNDIYHFVNRN 613
Query: 614 -------FYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
Y ++ EC G FYH S++ AQR Q++W + I+C T
Sbjct: 614 HKNSSGIVYCSTIAECESLCEYLTDRGLSVDFYHASLNAAQRVDTQERWITGKFKIVCTT 673
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
+AFGMGI+KPD RFVIHHS+P SIE Y+Q+ GRAGRDG+ S C+LYY+ +D ++ + +
Sbjct: 674 IAFGMGIDKPDTRFVIHHSIPSSIESYYQQTGRAGRDGKLSDCILYYNKNDIRKMLKIST 733
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
G+ QS H + +++E+ TEN+ + SYC +CRR+ + +FGE ++
Sbjct: 734 MGIVAQS-----HEEYQ-----KIMESKTENIDTVTSYCVGS-ECRRVSLMEYFGE--ET 780
Query: 776 AHCKKTCDNCSKIKS--FIEKD 795
CK CDNC+ K+ + E D
Sbjct: 781 KPCKTMCDNCTYTKANHYFEDD 802
>gi|297851930|ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
gi|297339688|gb|EFH70105.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
Length = 704
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 239/680 (35%), Positives = 345/680 (50%), Gaps = 103/680 (15%)
Query: 364 GSND-QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKS 422
GSN + WS F W + + VFG +R NQ+EIINA M+G DV V+M GGGKS
Sbjct: 59 GSNAIENWSEA-FEWDSRADDVRFNVFGISKYRANQKEIINAIMAGRDVLVIMAAGGGKS 117
Query: 423 LTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSD 482
L YQLPA++ G TLV+SPL+SLIQDQ+M L I A L+ ++ + + L
Sbjct: 118 LCYQLPAILRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKG 177
Query: 483 YCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGI 542
K+LYVTPEKV+KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ L I
Sbjct: 178 EHDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSI 237
Query: 543 LKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD----------- 591
LK +FP P++ALTATAT V+ D+++ L + C+ F S NRPNL+
Sbjct: 238 LKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKVV 297
Query: 592 CEKVAERLQVGLSYG-----HFFLLKEFYVVS---LECGHKAAFYHGSIDPAQRAFVQKQ 643
+++AE ++ S + F KE ++ E G A +YH +D R V +
Sbjct: 298 VDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMR 357
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
WSK+++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++
Sbjct: 358 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFR 417
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
+D R M+ E S +NL +V YC++ CRR
Sbjct: 418 SADVPRQSSMV---FYEYSGL--------------------QNLYDIVRYCQSKTKCRRS 454
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVF 823
HFGE S C CDNC+ E DV+D +K +V +V+ T + +L++
Sbjct: 455 AFFRHFGEP--SQDCNGMCDNCALSSEVKEVDVSDLSKLVVSMVQETQSKDQRVTMLQLG 512
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK----KSDVYGSV 879
N +H+ LS L + E ++ L+++ L EE + ++ Y ++
Sbjct: 513 DKLRN------KHKDLS-----AELKRDEIEHLVIKLIVDSVLKEEFQHTPYSTNAYVTM 561
Query: 880 SSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPS 939
+ A+ L+ GR+ + + ++ TK P + SG
Sbjct: 562 GPL-------ANQLLQGRKTI--KMETSSRQTK------KPKRSLSFSG----------- 595
Query: 940 QPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLE 999
++LNL LR + G ++ + + + +S + P + +EL
Sbjct: 596 -----LELNLDE--------LRKEISAADG-SILPHTVLSTQQISLISSQKPVSLQELES 641
Query: 1000 INGIGKAKVSKYGVRLLETI 1019
I IGK K KYG R+LE +
Sbjct: 642 I--IGKLKTEKYGDRILEEV 659
>gi|428310069|ref|YP_007121046.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
gi|428251681|gb|AFZ17640.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
Length = 757
Score = 356 bits (914), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 225/660 (34%), Positives = 359/660 (54%), Gaps = 75/660 (11%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
+ LE K FG +FRP QR+I+ ++ D+ V+MPTGGGKSL +QLPAL+ PG+T+V
Sbjct: 53 QSLEEALKHFFGYDAFRPGQRQIVEEALAQRDLLVIMPTGGGKSLCFQLPALLKPGLTVV 112
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
+SPL++L+QDQ+ L+ I ATFL+ + W + + REL K KLLYV PE++
Sbjct: 113 VSPLIALMQDQVDALVDNGIGATFLNSTLSWDDVRS--RELAILNGKIKLLYVAPERLL- 169
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
+ L LE + A+ ++ IDEAHCVS+WGHDFRP+Y+ + L+Q++P+ P+LALTAT
Sbjct: 170 GEKFLPFLEKVRAQIGISAFAIDEAHCVSEWGHDFRPEYRQMKQLRQRYPDIPILALTAT 229
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERLQVGLSYGHFFL 610
AT V++D+++ L L I SFNRPNL+ + + ++ ++++ G +
Sbjct: 230 ATKRVQQDILEQLTLRQPGIHIASFNRPNLYYEVQPKERHSYNQLLKKIKSHKGSGIVYC 289
Query: 611 LKEFYV--VSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKP 665
L V V+ G A YH + RA Q ++ +D++ ++ AT+AFGMGINKP
Sbjct: 290 LSRRAVDEVAFRLQKDGIDALPYHAGMSDEARATNQTRFIRDDVQVMVATIAFGMGINKP 349
Query: 666 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFT 725
DVRFVIH+ LP ++E Y+QE GRAGRDG+ + C L++ + + ++I EQ P
Sbjct: 350 DVRFVIHYDLPHNLERYYQESGRAGRDGEPAHCTLFFGAGNIRTIDYLI-----EQKP-D 403
Query: 726 PGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC 785
P R + L +++ Y E DCRR +QL +FGE+F +C CDNC
Sbjct: 404 PKEQR-----------VARQQLRQVIDYAEG-TDCRRTIQLRYFGERF-KGNC-GNCDNC 449
Query: 786 SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
K +D T A+K + V ++F +HI++V RGS Q ++++ H LS +G G
Sbjct: 450 RNPKPV--EDWTIEAQKFLSCVARCKERFGMAHIIDVLRGSRKQKIEQYGHHLLSTYGIG 507
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
K + + + R L+ + L E +D Y +LK+N+ L R +
Sbjct: 508 KDRSADDWKMLGRSLLHQGLLDE---TTDGY----RILKLNKLSWEVLRSQRTVEI---- 556
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
AI T ++K+ +++P + + L LR LR +
Sbjct: 557 -AITQTAVAKA----------LAEINPRSAE-------------AEMLLERLRKLRKQIA 592
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
V Y +F +++L+ ++++ P+T E +I+G+ KV++YG + + I + +E
Sbjct: 593 D--AHSVAPYVVFADSSLRLMAQQQPQTLEAFAKISGVVTNKVNQYGDKFVSEIRAFCQE 650
>gi|115486585|ref|NP_001068436.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|77552472|gb|ABA95269.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|113645658|dbj|BAF28799.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|125535256|gb|EAY81804.1| hypothetical protein OsI_36975 [Oryza sativa Indica Group]
gi|125568785|gb|EAZ10300.1| hypothetical protein OsJ_00135 [Oryza sativa Japonica Group]
Length = 588
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 194/426 (45%), Positives = 254/426 (59%), Gaps = 35/426 (8%)
Query: 385 NKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVS 444
N +FGN SFRP Q E A +S D FVLMPTGGGKSL YQLPA + PG+T+V+ PL+S
Sbjct: 178 NVVIFGNKSFRPLQYEACRAAVSNMDTFVLMPTGGGKSLCYQLPATLHPGVTVVVCPLLS 237
Query: 445 LIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
LI+DQI+ L + IPA FL+ ++ +++EL S +KLLYVTPE++A + +
Sbjct: 238 LIEDQIVALNFKFAIPAAFLNSQQTPSQSSAVIQELRSGKPSFKLLYVTPERMAGNSSFI 297
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
L L+ R LLAR VIDEAHCVSQWGHDFRPDY+GLG LKQ FP P++ALTATATASV
Sbjct: 298 GILIGLHQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCLKQNFPRVPIMALTATATASV 357
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDC--EKVAERLQVGLSYGHFFLLKEFYVVSL-- 619
+D++ L + N + ++SF+R NL + + + Q+G F+ V L
Sbjct: 358 CKDILSTLRIPNATVLKRSFDRTNLNYEVIGKTKTPQKQLGDLLKERFMNMSGIVYCLSK 417
Query: 620 -ECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
EC A F YH + QR+ VQ +W E+ +ICAT+AFGMGI+KPDV
Sbjct: 418 NECADTAKFLREKYKIKCAHYHAGLAARQRSNVQGKWHSGEVKVICATIAFGMGIDKPDV 477
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH+++ KSIE Y+QE GRAGRD + C++ Y D R+ M+ +S
Sbjct: 478 RFVIHNTMSKSIESYYQESGRAGRDNLPAHCIVLYQKKDLGRIVCMLRNSGNFKS----- 532
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK---KTCDN 784
F VA E +M +YCE +CRR L HFGE++D CK CDN
Sbjct: 533 -ESFKVA---------MEQAKKMQTYCELKTECRRQTLLGHFGEQYDRQRCKHGCSPCDN 582
Query: 785 CSKIKS 790
C KI S
Sbjct: 583 CIKIPS 588
>gi|126661004|ref|ZP_01732090.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
gi|126617703|gb|EAZ88486.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
Length = 710
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 232/659 (35%), Positives = 358/659 (54%), Gaps = 79/659 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FR Q++IIN ++ D+ ++MPTGGGKSL +QLPAL+ G+ +V+S
Sbjct: 8 LENALKYFFGYDQFRSGQKQIINEALNDKDLLIIMPTGGGKSLCFQLPALLKSGVCVVVS 67
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ LL I ATFL+ + E Q RE K KL+YV PE++ +D
Sbjct: 68 PLIALMQDQVDALLDNGIGATFLNSTLNREELQS--RENAILKGKIKLVYVAPERLL-ND 124
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ L + L+ IDEAHCVS WGHDFRP+Y+ L L+ ++P P+ ALTATAT
Sbjct: 125 NFLNFLDFLKQKVGLSAFAIDEAHCVSAWGHDFRPEYRQLKQLRFRYPKVPMFALTATAT 184
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL--------SYGHFFLL- 611
V+ D+++ LGL N + SF+RPNL+ + ++ + R L G + L
Sbjct: 185 KRVRADIIEQLGLQNPTVHVASFDRPNLYYEVQQKSRRSYTQLLNYIRNQEGSGIIYCLS 244
Query: 612 -KEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
K ++L G A YH + +RA Q ++ +D++ II AT+AFGMGINKPDV
Sbjct: 245 RKNVETIALRLQQDGIDALPYHAGMYDDERATNQTRFIRDDVRIIVATIAFGMGINKPDV 304
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ LP+++E Y+QE GRAGRDG+ ++C L++S+ D R++++I Q + E+
Sbjct: 305 RFVVHYDLPRNLESYYQESGRAGRDGEPANCALFFSFGDLKRLEYLIDQKIDEKE----- 359
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
GR + L ++V Y E +CRR + L +FG+++ C CDNC
Sbjct: 360 ------QRVGR------QQLRQVVDYAEG-TECRRSIVLRYFGQQY-KGKC-DNCDNCKH 404
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K +D T A+K + V ++F SHI++V RGS + V+K+ H LS +G GK
Sbjct: 405 PKPV--EDWTIEAQKFLSCVARCQERFGMSHIIDVLRGSKKKKVEKYGHHLLSTYGIGKD 462
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ +E + R L+ + F+ E +D + SVLK+N+ ++ I R + A
Sbjct: 463 KSAAEWKMLGRSLIHQGFVNE---TTDGF----SVLKLNK---YSWEIFRNERKVEIAIA 512
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ T + +D +P K E DL L LR LR L +
Sbjct: 513 KSLTSKASNDYSPRKA--------------------ESDL-----LLHKLRQLRKHLADQ 547
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
V Y +F +++L+ +++ P+T + +I+G+ K +YG ++ S I+EF
Sbjct: 548 --NKVAPYVVFADSSLRLMAQIKPQTIDAFKKISGVTAYKTQQYG----DSFVSEIREF 600
>gi|404494034|ref|YP_006718140.1| ATP-dependent DNA helicase RecQ [Pelobacter carbinolicus DSM 2380]
gi|77546057|gb|ABA89619.1| ATP-dependent DNA helicase RecQ [Pelobacter carbinolicus DSM 2380]
Length = 596
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 225/642 (35%), Positives = 349/642 (54%), Gaps = 80/642 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+VFG SFRP Q EI+ + G D FVLMPTGGGKSL +QLPAL+ G+ +V+SPL+SL
Sbjct: 10 KRVFGFQSFRPLQEEIVARILDGQDAFVLMPTGGGKSLCFQLPALLRQGVGIVVSPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + + A + + ++ +++L EL++ + LLY+ PE++ S L +
Sbjct: 70 MKDQVDALRASGVRAAYYNSSLGQKAARQVLAELHAG--QLDLLYIAPERLM-SPGFLER 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L ++ +A I IDEAHC+SQWGHDFRP+Y LG+L++ FP P++ALTATA ++
Sbjct: 127 LRDMD----VALIAIDEAHCISQWGHDFRPEYTQLGVLRRSFPGVPLVALTATADVQTRQ 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVS---- 618
D++ L L + F SF+RPN+ ++ + A +L L+ GH Y +S
Sbjct: 183 DILSRLELDDDDCFVTSFDRPNIRYTVLEKHQPARQLMKFLA-GHGSEAGIVYALSRKRV 241
Query: 619 -------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ G AA YH + +R VQ ++ +DE+ I+ ATVAFGMGI+K +VRFV+
Sbjct: 242 EEVAKKLCDAGLSAAAYHAGLGDGERQRVQDEFLRDELQIVVATVAFGMGIDKSNVRFVV 301
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ LPK+IEGY+QE GRAGRDG + +L + Y D + +I +G E+ NR
Sbjct: 302 HYDLPKNIEGYYQETGRAGRDGLAAEALLLFGYGDIALCRGLIEKGHNEE------QNRI 355
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ L M S+ E + CRR + L +FGE H + C NC
Sbjct: 356 EL-----------HKLNAMASFAEA-LTCRRQVLLGYFGE-----HATEDCGNCDICLQP 398
Query: 792 IEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
E D T+ A+K + V GQ+F + H+++V RG+ N+ + + H+ LS +G G +++
Sbjct: 399 PETYDATEDARKALSCVYRVGQRFGAGHVIDVLRGTRNERMLRLGHDRLSTYGIGADVSR 458
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
++R LV +L ++V SVL++ + KA L+ G + L P I
Sbjct: 459 DAWGSLVRQLVHRGYLYQDVGN-------YSVLRLTE-KARPLLRGEITLQLAKPR-IKV 509
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ K PS S+ +E +++ L+ +LR LR + E
Sbjct: 510 KAVKK----------------PS-----SRSASEWSYDVA--LFDALRTLRKQIADH--E 544
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
V + +F +ATL ++ R PR E LL +NG+G+ K+ +YG
Sbjct: 545 HVPPFVVFSDATLAEMAARRPRDEAALLSVNGVGQRKLQRYG 586
>gi|296085510|emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 250/674 (37%), Positives = 340/674 (50%), Gaps = 94/674 (13%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ WS F W + + +FG ++R NQREIINA MSG DV V+M GGGKSL YQL
Sbjct: 65 ENWSG-PFDWDAQADDVRFNIFGISTYRANQREIINAVMSGRDVLVIMAAGGGKSLCYQL 123
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA++ G+ LV+SPL+SLIQDQ+M L IPA L+ +++ I + L K
Sbjct: 124 PAILRDGVALVVSPLLSLIQDQVMGLAALGIPAYMLTSTTSKEDEKFIYKALEKGDGDLK 183
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
+LYVTPEK++KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ LGILK +F
Sbjct: 184 ILYVTPEKISKSKRFVSKLEKCHHSGCLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 243
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEK----------VA 596
P+ PV+ALTATAT V+ D+++ L + CI F + NRPNL +M EK +A
Sbjct: 244 PDVPVVALTATATKKVQNDLMEMLHIPKCIKFVSTVNRPNLFYMVREKSSVGRVVIDEIA 303
Query: 597 ERLQ-------VGLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSK 646
E +Q G+ Y F KE V+ E G A +YH +D R V +WS
Sbjct: 304 EYIQESYPNNESGIVY--CFSRKECEQVAKELRERGISADYYHADMDVNARERVHLRWSN 361
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LY+ D
Sbjct: 362 SKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGD 421
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
R M+ NSG +NL +V YC++ +CRR
Sbjct: 422 VPRQSSMVF-----------------YENSG------LQNLYDIVQYCQSKRECRRNAFF 458
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
HF E C CDNC+ E DV+ AK ++ L L Q + R +
Sbjct: 459 RHFAEPLQD--CNGMCDNCAFSTEVKEVDVSCLAKAMISL--LQDMQDNDQ------RLT 508
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVN 886
+ Q V K + + L G L K E ++ L+ + L EE + + + L +
Sbjct: 509 MLQMVDKMKVKNKDL---GSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLL 565
Query: 887 QSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVD 946
+ + G++ V L STK V G++ S K S +
Sbjct: 566 WKQVSH---GKRIVKLEI-----STK-----VKTKTGNMKSSKRSLT------------- 599
Query: 947 LNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEING-IGK 1005
S+ L L LR L G G+ + + + LS + P + +LE IGK
Sbjct: 600 ---SSGLELKLDELRKELSSTHG-GIFPHSVLSTQQISILSAQKPTS---ILEAKTMIGK 652
Query: 1006 AKVSKYGVRLLETI 1019
K KYG ++LE I
Sbjct: 653 LKTEKYGSKILEEI 666
>gi|241829138|ref|XP_002414740.1| DNA helicase recq1, putative [Ixodes scapularis]
gi|215508952|gb|EEC18405.1| DNA helicase recq1, putative [Ixodes scapularis]
Length = 619
Score = 355 bits (912), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 191/480 (39%), Positives = 275/480 (57%), Gaps = 45/480 (9%)
Query: 366 NDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTY 425
N W +PW+ + VF RP Q IN TMS HD V+MPTGGGKSL +
Sbjct: 54 NQTDWHKSTYPWSAGVLDKLTSVFKMKGLRPTQLPAINVTMSNHDCIVIMPTGGGKSLCF 113
Query: 426 QLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK 485
QLPAL+ PG+T+V+SPLVSL++DQ+M L + + P LS + I ++
Sbjct: 114 QLPALLSPGLTVVVSPLVSLMEDQVMALERLSYPVAMLSATTPQKKTSAITNAMDDKKSP 173
Query: 486 YKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQ 545
KL+YVTPEK+AKS + +LE + +R+ IDE HC SQWG+DFRPDY+ LGI+K+
Sbjct: 174 IKLIYVTPEKMAKSKRFMAKLEKAYQKGCFSRLAIDEVHCCSQWGNDFRPDYKYLGIMKR 233
Query: 546 KFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-CEKV---AERLQ- 600
+FP P++ LTATA+A++ D+ + L + +C++ R +RPNL + C K AE L+
Sbjct: 234 QFPKVPIMGLTATASATIVADIQKMLSIEDCVVLRAPLDRPNLRYEVCSKPSGQAEVLET 293
Query: 601 -VGLSYGHF---------FLLKEFY-VVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKD 647
VGL G F F +K+ + V S C H +A Y+ ++D R+ V +WS +
Sbjct: 294 LVGLLLGRFRGQSGIVYCFSIKDTHEVASGLCQHGIRADCYNANMDHKDRSDVHFRWSHN 353
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
EI+++ ATVAFGMGI+KPDVRFVIHH++ KS+E Y+QE GRAGRD + C++ Y ++D
Sbjct: 354 EIDVVVATVAFGMGIDKPDVRFVIHHTMSKSVENYYQESGRAGRDDAPAVCIVMYRFADI 413
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
R + AE+ T EN+ MVSYC CRR +
Sbjct: 414 FR---QTTSVFAEK--------------------TGQENVYAMVSYCTEARRCRRAVLCQ 450
Query: 768 HFGEKFDSAHCKKTCDNC-SKIKSFIEKDVTDTAKKLVELVK---LTGQQFSSSHILEVF 823
HFGE + C CDNC S + S E DVT + + +++K G+Q +++ +L+ +
Sbjct: 451 HFGENREETCCNGMCDNCDSTVSSTKEVDVTRHVQDIYKILKAAIAVGEQMTATKLLDAW 510
>gi|77552739|gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 707
Score = 355 bits (912), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 244/675 (36%), Positives = 336/675 (49%), Gaps = 96/675 (14%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS F W + + VFG S+R NQREIINA MSG DV V+M GGGKSL YQLPA
Sbjct: 67 WSG-SFLWDSRADDVRFNVFGISSYRQNQREIINAIMSGRDVLVIMAAGGGKSLCYQLPA 125
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
++ GITLV+SPL+SLIQDQ+M L I A L+ ++ + + L+ + K+L
Sbjct: 126 VLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTTNKEVEKFVYKALDKGEGELKIL 185
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK++KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ LGILK +FP+
Sbjct: 186 YVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKVQFPS 245
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL------ 603
P++ALTATAT V+ D+++ L + C+ F + NRPNL+ KV E+ VG
Sbjct: 246 VPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLFY---KVFEKSPVGKVVIDEI 302
Query: 604 ------SYG-------HFFLLKEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKD 647
SY + F KE V+ E + A +YH +D R V +WSK
Sbjct: 303 ANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYHADMDVISREKVHMRWSKS 362
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LYY D
Sbjct: 363 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYRPGDV 422
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
R M+ N G +NL +V YC++ CRR
Sbjct: 423 PRQSSMVF-----------------YENCG------LQNLYDIVRYCQSKRSCRRGAFFR 459
Query: 768 HFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVEL---VKLTGQQFSSSHILEVFR 824
HFGE + C CDNC+ E D T K +V L ++L Q+ + +++ F
Sbjct: 460 HFGEA--AQDCNGMCDNCTSSLELKEIDATHHTKIIVSLLHDIQLNDQRATLLQLVDKF- 516
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLK 884
K + + L L K +++ L+++ L EE + +
Sbjct: 517 --------KAKWKDLGCSNESIDLKKEGIEQLVVQLILDRVLKEEFQHT----------- 557
Query: 885 VNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNE 944
+ A N + + KLS + + KG SG RN
Sbjct: 558 ---AYATNAYVALGPLWKPALQGNRPVKLSVAFHSQDKG---SGSKRTKRNQMS------ 605
Query: 945 VDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIG 1004
NL AKL R L + + GV + + + L+++ P T EL ++ IG
Sbjct: 606 ---NLEAKLDDLRRELSS-----SNGGVFPHAVLSAQQISLLNRQKPTTVAELEKL--IG 655
Query: 1005 KAKVSKYGVRLLETI 1019
K K KYG ++E +
Sbjct: 656 KVKTGKYGSAIIELM 670
>gi|392544476|ref|ZP_10291613.1| ATP-dependent DNA helicase [Pseudoalteromonas piscicida JCM 20779]
Length = 607
Score = 355 bits (911), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 221/655 (33%), Positives = 339/655 (51%), Gaps = 87/655 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG +FR Q +II ++++G D VL+PTGGGKSL YQ+PA++ G+T+VISPL+SL
Sbjct: 20 KDVFGYSTFRDGQLDIIQSSLAGQDTLVLLPTGGGKSLCYQVPAVLFAGVTIVISPLISL 79
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L I A +++ ++ W +Q++ L + KLLYV PEK + D + R
Sbjct: 80 MQDQVAQLKAQGIAAEYINNSVAWEQQKDTYDALFQG--RLKLLYVAPEKALQRDFIDR- 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ + N ++ IDEAHCVS WGHDFRP Y L L+Q FP+ P++ALTATA + ++
Sbjct: 137 ISNCN----ISLFAIDEAHCVSHWGHDFRPHYFRLKELRQHFPSVPMMALTATADLATRK 192
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL------------QVGLSY-GHFFLLK 612
D+VQ LG+ I+ SF+RPN+ E+ + L Q G+ Y G +
Sbjct: 193 DIVQQLGMQAPFIYTGSFDRPNIRYTIEEKFKPLSQLIRYLKEQKGQSGIIYCGSRKRVD 252
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+ ++ G AA YH +D QR FVQ ++++D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 253 DIAEKLIDAGFNAAGYHAGLDNDQRQFVQNRFARDDIQIVVATVAFGMGINKPNVRFVVH 312
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PKS+E Y+QE GRAGRD + V+Y+ +D RV+ P R
Sbjct: 313 YDIPKSVEAYYQETGRAGRDSLAAEAVMYFDPADIPRVRRFFED--------IPDEQRRK 364
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
V + M S+ E CRR + L +F E + ++ C NC
Sbjct: 365 V---------EEQRFQAMSSFAEAQT-CRRQILLNYFSE-----YQREACGNCDICLNPP 409
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T A++ + V Q+F +I+++ RG+ +++ H TLS +G GK
Sbjct: 410 KQF---DGTLVAQQALSCVYRAEQRFGIGYIVDILRGANTARIREQNHHTLSTYGIGKEH 466
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ILR L+ L +++ Q LR A
Sbjct: 467 SNEFWLSILRQLIHHGLLSQDIT--------------------------QGATLRLTEAA 500
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + + A+ L++ + D +Q N KL++ LR LR L E
Sbjct: 501 RAVLRGEYVLQLAEPRLVAKHVY---QDKLAQ------FNYDKKLFTKLRALRKQLADE- 550
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ V Y +F + TL +++R P T+ E L+++G+G K+SKYG ++ I + +
Sbjct: 551 -DDVPPYVVFNDRTLAEMTQRTPTTDSEFLQVSGVGFTKLSKYGAPFMQLIRNYL 604
>gi|332667951|ref|YP_004450739.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
gi|332336765|gb|AEE53866.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
Length = 713
Score = 355 bits (911), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 224/660 (33%), Positives = 351/660 (53%), Gaps = 69/660 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG FRP Q EII A +G D VLMPTGGGKS+ +Q+PA+ PG +V+SPL+SL
Sbjct: 11 KRYFGYDQFRPLQAEIIRAIFAGKDALVLMPTGGGKSVCFQIPAVTMPGTCVVVSPLISL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ ++ EQ ++ + LLYV+PEK+ + +
Sbjct: 71 MKDQVEGLRANGIQAAFLNSAIDSREQLKVEESFYAG--ALNLLYVSPEKLVSGNFV--- 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
S+ R + IDEAHC+S WGHDFRP+Y +G+LKQ FP PV+ALTATA ++
Sbjct: 126 --SILKRGKINLFAIDEAHCISAWGHDFRPEYTQMGMLKQHFPQVPVIALTATADKLTRK 183
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL------------QVGLSYGHFFLLKE 613
D+V L L IF SF+RPNL ++ +RL Q G+ Y E
Sbjct: 184 DIVDQLKLEEPGIFIASFDRPNLSLEVRPGQQRLGQIQEFVQKHPKQAGIIYCLSRKTAE 243
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L + G KA YH + P +R+ +Q + D I+IICATVAFGMGI+K +VR+VIH
Sbjct: 244 DVAAKLAQQGLKAEAYHAGLSPDRRSKIQDNFINDNIHIICATVAFGMGIDKSNVRWVIH 303
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
++LPK++EGY+QE GRAGRDG ++ +L+YS++D ++ +I G N
Sbjct: 304 YNLPKNLEGYYQEIGRAGRDGAKADTLLFYSFADVSMLRDIIQNGE-------------N 350
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
A + E L RM Y E+ + CRR + L +F E S +C CD C +I
Sbjct: 351 AAQN----EIQLVKLERMQQYAES-LACRRRILLAYFSENL-SKNC-GNCDICRNPPQYI 403
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K + V +Q +++V RGS + +++ ++T+ +GAG+ L++ +
Sbjct: 404 --DGTQIAQKALSAVYRVNEQVPMGMLIDVLRGSGRKEIRQLGYDTIKTYGAGRDLSQWD 461
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ L LV +L ++ +SVL++ + +H ++ + V L PS+ +
Sbjct: 462 WQQYLMQLVNLGYL-------EIAYDANSVLRLT-AASHEVLFKSRTVQLVKPSSYKERQ 513
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ K L+ + L +L+ LR +R + ++ EG+
Sbjct: 514 EEEKAAAKTKPKTLAKQ-----------------ERLRDELFEQLRQVRKEIAQQ--EGI 554
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKN 1032
Y IF +ATL+ ++ + P +E LL ++G+G+ K++++G + LE I + +KN
Sbjct: 555 PPYLIFSDATLEEMAFKKPLSETALLGVSGVGEKKLAQFGQQFLEAILEFVGSTSPKEKN 614
>gi|91978870|ref|YP_571529.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisB5]
gi|91685326|gb|ABE41628.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisB5]
Length = 619
Score = 355 bits (911), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 227/649 (34%), Positives = 339/649 (52%), Gaps = 68/649 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR +Q +I+ G D VLMPTGGGKSL YQLPAL+ G +V+SPL++L++
Sbjct: 23 VFGLPGFRGHQEQIVRHVAGGGDCLVLMPTGGGKSLCYQLPALLRDGCGIVVSPLIALMR 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL+A + A L+ ++ + E I R+L S + LLYV PE++ L
Sbjct: 83 DQVAGLLEAGVRAAALNSSLSYAEADAIERQLLSG--ELDLLYVAPERLLTPRCL----- 135
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
S+ AR L+ IDEAHCVSQWGHDFRP+Y GL + +KFPN P +ALTATA A + ++
Sbjct: 136 SMLARAKLSLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPNVPRIALTATADALTRREI 195
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVS------ 618
+ LGL F SF+RPN+ +D + +L+ ++ H Y +S
Sbjct: 196 TERLGLTEAPCFVSSFDRPNIRYTIVDKQNAPAQLKAFIADKHTGHSGVVYCLSRAKVED 255
Query: 619 -----LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G A YH + RA Q ++ ++ +I AT+AFGMGI+KPDVRFV H
Sbjct: 256 TAAALCKAGITALPYHAGLPAGTRAANQDRFINEDGVVIVATIAFGMGIDKPDVRFVAHL 315
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S + Y SD ++ + MI + + G F
Sbjct: 316 DLPKSIEAYYQETGRAGRDGKPSDAWMAYGLSDIVQQRRMIDE--------STGSEAFKR 367
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
++G+ L +V CE+ CRR L +FGE C CDNC
Sbjct: 368 VSAGK--------LDALVGLCES-TGCRRTRLLGYFGETSTDLQCGN-CDNCLSPPKV-- 415
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
+D T A+KL+ TGQ+F + H+++V G L + V + H+ LS+ G G L + +
Sbjct: 416 QDGTVAAQKLLSCAYRTGQRFGAQHLIDVLLGRLTERVGQFGHDKLSVFGIGGELNEKQW 475
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
++R LV L+ + S+ +G+ LK+ ++ + ++ G V+LR T
Sbjct: 476 RAVIRQLVSLGHLLPD---SEAFGA----LKLTET-SRTVLKGETQVMLR-----EQTGG 522
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
+G L+ +R+ T P+ L+++L+ R + +E GV
Sbjct: 523 RPPRARSRRGDLVGS--GAARDATAGDPE----------LFAALKAWRAGVARE--RGVP 568
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
AY + +AT+ ++ PR+ +EL I GIG K+ YG LL I++
Sbjct: 569 AYVVLHDATMDGIAAARPRSLDELRGIAGIGDKKLEHYGAALLAVIDAA 617
>gi|443316688|ref|ZP_21046123.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
gi|442783715|gb|ELR93620.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
Length = 720
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 231/675 (34%), Positives = 349/675 (51%), Gaps = 95/675 (14%)
Query: 371 SSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPAL 430
S+ FP LEA K FG FR QR I A ++ D V+MPTGGGKSL YQLPAL
Sbjct: 5 STAAFP---SLEAALKHFFGYDQFRLQQRAAIEAVLNQQDALVVMPTGGGKSLCYQLPAL 61
Query: 431 ICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
+ G+T+V+SPL++L+QDQ+ L I ATFL+ +++ E + RE + + KLLY
Sbjct: 62 LRLGVTIVVSPLIALMQDQVEALNNNGIAATFLNSSLDLMEARS--REYDLLQGRTKLLY 119
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
V PE++ S+ L L + LA IDEAHCVS+WGHDFRP+Y+ L L+ F
Sbjct: 120 VAPERLL-SENFWPFLTRLQQQVGLAGFAIDEAHCVSEWGHDFRPEYRQLHRLRSAFAGI 178
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFL 610
P+LALTATAT V++D+VQ L L + SFNRPNL+ + + +YGH L
Sbjct: 179 PMLALTATATERVRQDIVQQLQLQKPEVLVASFNRPNLYYEVRPKDRQ-----TYGH--L 231
Query: 611 LKEFYVVS----LEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
L++ ++ + C G A YH + RA Q+++ +D++
Sbjct: 232 LQQVQSINGAGIIYCLSRKRVDEIALRLQNDGIAALPYHAGLPDLTRAENQRRFIRDDVR 291
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
++ AT+AFGMGINKPDVRFV+H+ LP+++E Y+QE GRAGRDG+ + C +Y+ Y+D V
Sbjct: 292 VMVATIAFGMGINKPDVRFVVHYDLPRTLESYYQESGRAGRDGEPAHCTVYFGYADVSTV 351
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
++I Q P N+A + L +++ Y E+ V CRR +QL +FG
Sbjct: 352 NYLIDQ--------KPDEREQNIAR---------QQLRQVIDYAESTV-CRRQIQLGYFG 393
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQY 830
E F S C + CDNC K ++D T A+K + V ++F +HI++V RGS +
Sbjct: 394 E-FLSESCDR-CDNCRFPKP--KQDWTIEAQKFLSCVARCRERFGMTHIIDVLRGSGKKR 449
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
++ +H+ LS +G GK E + R L+ + L E V VLK+N + +
Sbjct: 450 IRDLQHDQLSTYGIGKDRTAEEWKILGRSLLHQGLLEETVDG-------FPVLKLN-AAS 501
Query: 891 HNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLS 950
++ + V + P + + T
Sbjct: 502 WQVLRKQLTVEVAMPEGLQGVATGTTSAT------------------------------E 531
Query: 951 AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
L + L+ LR L +GV Y +F TL+ +++R+P++ + I+G+G K+ +
Sbjct: 532 DGLLARLKALRKRLAD--AQGVPPYVVFTETTLRQMAQRLPQSLDAFARISGVGSRKLEQ 589
Query: 1011 YGVRLLETIESTIKE 1025
YG +E I + E
Sbjct: 590 YGQTFVEEITAFCGE 604
>gi|56603560|dbj|BAD80740.1| DNA helicase [Lentinula edodes]
Length = 945
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 219/572 (38%), Positives = 313/572 (54%), Gaps = 40/572 (6%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC--- 432
P+ K++ N ++VF +FR NQ E I A M+G DVFVLMPTGGGKSL YQLPA +C
Sbjct: 382 PFYKEIMRNLQRVFRLKNFRQNQLEAILAAMAGRDVFVLMPTGGGKSLCYQLPA-VCNGG 440
Query: 433 --PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLY 490
G+T+VISPL+SL+ +Q+ L ++ L N E + EI+R L Y K LLY
Sbjct: 441 STKGVTIVISPLLSLMTNQVDALKTKDVDV--LVWNSETVDHGEIMRRLRG-YPKPSLLY 497
Query: 491 VTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNT 550
V+PEKV S L L LAR V+DEAHC+S WGHDFR YQ L L++ +P
Sbjct: 498 VSPEKVKDSGALKSIFADLYRAGDLARFVVDEAHCISTWGHDFREAYQCLDSLRETYPRV 557
Query: 551 PVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSY---- 605
P++ALTATA ++ +D+++ L L NC F+QSFNR NL ++ +K A+ L S+
Sbjct: 558 PIMALTATANQTMVDDIMKRLKLKNCAFFQQSFNRVNLNYLILDKKAKILDDIYSFINTK 617
Query: 606 -----GHFFLLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICAT 655
G + L + + G KA +H + + V ++W D I I+ AT
Sbjct: 618 HRGETGIIYCLGRDKCEKVAGQLRQKGLKARHFHAQMSTTDKEQVLQEWQSDRIQIVVAT 677
Query: 656 VAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS 715
VAFGMGI+K +VRFVIHH LPKS++GY+QE GRAGRD + + C+L+YSY D+ + MI+
Sbjct: 678 VAFGMGIDKANVRFVIHHDLPKSLDGYYQETGRAGRDQKPADCLLFYSYRDYKVIVKMIN 737
Query: 716 QGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS 775
P + + S E ++ YC N DCRR+ L FGEKF+
Sbjct: 738 ---------NPRNGDSSELASPEARERQELQARIVMQYCLNVSDCRRVQLLQFFGEKFER 788
Query: 776 AHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK----LTGQQFSSSHILEVFRGSLNQYV 831
+C + CDNC +E+D+T+ AK +V LV+ +T Q + +FRG+ ++
Sbjct: 789 RNCHQFCDNCRHAVEMVEQDLTEEAKAIVSLVQHFHSITTQLVTLDQCRTIFRGADTSFI 848
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAH 891
++ + L +GAGKHL ++ + L + L +EV G LK + +A
Sbjct: 849 RERNYNRLPQYGAGKHLDGELHEQLFKRLCFLEGL-DEVSMQGNGGWHVYYLKPGK-RAD 906
Query: 892 NLIIGRQNVVLRF-PSAINSTKLSKSDVTPAK 922
+ GR+ V L + P A K S S V +
Sbjct: 907 EISSGREKVKLFYRPKASKVIKASSSSVAKTR 938
>gi|285019020|ref|YP_003376731.1| DNA helicase superfamily II protein [Xanthomonas albilineans GPE
PC73]
gi|283474238|emb|CBA16739.1| putative dna helicase superfamily II protein [Xanthomonas albilineans
GPE PC73]
Length = 602
Score = 355 bits (910), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 228/648 (35%), Positives = 345/648 (53%), Gaps = 71/648 (10%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q++I+ +GHD VLMPTGGGKSL YQ+P+L+ G +V+SPL++L+
Sbjct: 11 RVFGYDQFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQIPSLLREGTGIVVSPLIALM 70
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
QDQ+ L Q + A +L+ ++ Q + R L + + LLYV PE++ L
Sbjct: 71 QDQVEALHQVGVRAEYLNSTLDAERAQHVERALLAG--ELDLLYVAPERLLTPRFL---- 124
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
SL R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P TP +ALTATA + +
Sbjct: 125 -SLIERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQTPRIALTATADPPTQRE 183
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMDCEKV--AERLQVGLSYGHFFLLKEFYVVS------ 618
+ + L L F SF+RPN+ + A R + GH Y +S
Sbjct: 184 IAERLDLAQARHFVSSFDRPNIRYTVVQKDNARRQLLDFLRGHRGSAGIVYCLSRRKVEE 243
Query: 619 -----LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G A YH + RA Q+++ ++E ++CAT+AFGMGI+KPDVRFV H
Sbjct: 244 TADFLVREGLNALPYHAGLPANVRAEHQRRFLREEGIVMCATIAFGMGIDKPDVRFVAHT 303
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKS+EGY+QE GRAGRDG + L Y D + +K MI QG A G +R V
Sbjct: 304 DLPKSLEGYYQETGRAGRDGDAAEAWLCYGLGDVVLLKQMIEQGEA-------GEDRKRV 356
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
L +++ YCE+ + CRR + L +FGE + C CDNC ++
Sbjct: 357 ---------ERRKLDQLLGYCES-LQCRRQVLLANFGETYPQP-C-GNCDNC--LQPADA 402
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D T +K + V +GQ+F H++++ RG+ ++ +K+ HE LS +G GK L
Sbjct: 403 WDATVAVQKALSCVYRSGQRFGVGHLIDILRGNASEKIKQFGHERLSTYGIGKDLDIRAW 462
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+ R LV L EV SD YG L++ + + ++ G + +++R S
Sbjct: 463 RGVFRQLVATGLL--EV-DSDAYGG----LRLTDA-SRQVLKGERQIMMRRELPSRSRDR 514
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
+P R P QPQ DL L+++LR LR L KE + V
Sbjct: 515 GDRSGSP-------------RTGLPVQPQ---DLG----LFNALRDLRAGLAKE--QNVP 552
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
A+ IF ++TL++++++ P + L + GIG +K+++YG +L+E + +
Sbjct: 553 AFVIFHDSTLRNIAEQRPTNLDALARVGGIGGSKLARYGQQLIEVVRA 600
>gi|157368442|ref|YP_001476431.1| ATP-dependent DNA helicase RecQ [Serratia proteamaculans 568]
gi|157320206|gb|ABV39303.1| ATP-dependent DNA helicase RecQ [Serratia proteamaculans 568]
Length = 614
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 222/650 (34%), Positives = 345/650 (53%), Gaps = 82/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IIN + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 22 RDTFGYQQFRPGQQTIINTAIGGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A + +Q E++ S + K+LY+ PE++ D L Q
Sbjct: 82 MKDQVDQLLAYGVAAACYNSTQTREQQLEVMAGCRSG--QIKMLYIAPERLMM-DSFLDQ 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N LLA +DEAHC+SQWGHDFRP+Y+ LG+LKQ+FP+ PV+ALTATA S +
Sbjct: 139 LGG-NPPALLA---VDEAHCISQWGHDFRPEYRALGLLKQRFPDMPVIALTATADESTRG 194
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + ++ SF+RPN LW + +R + G+ Y +
Sbjct: 195 DIVRLLALQDPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNSRAK 252
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 253 VEDTTARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFV 312
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 313 VHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EEKP------- 360
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G+ L+ L M ++ E CRRL+ L +FGE H + C NC
Sbjct: 361 -----AGQQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGE---GKH--QNCGNCDICLD 409
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D + A+K + V GQ+F +I+EV RGS NQ ++++ HE L ++G G+
Sbjct: 410 PPKRYDGLEDARKALSCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHEKLPVYGIGREQT 469
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ +LR L+ F+ + + ++ S L++ ++ A ++ G + L P I
Sbjct: 470 TEHWTSVLRQLIHLGFITQNI-------AMHSALQLTEA-ARPVLRGELELQLAVPR-IQ 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
S K S + G N KL++ LR LR + E
Sbjct: 521 SLKARSSSNQKSYGG-----------------------NYDRKLFAKLRKLRKSIADE-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E + Y +F +ATL +++++P +LL +NG+G+ K+ ++G + I
Sbjct: 556 ENIPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAMI 605
>gi|157963641|ref|YP_001503675.1| ATP-dependent DNA helicase RecQ [Shewanella pealeana ATCC 700345]
gi|157848641|gb|ABV89140.1| ATP-dependent DNA helicase RecQ [Shewanella pealeana ATCC 700345]
Length = 607
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 220/663 (33%), Positives = 350/663 (52%), Gaps = 85/663 (12%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
+L + + VFG +FR QRE+I +G D V+MPTGGGKSL YQLPAL+ PG+T+V+
Sbjct: 12 QLSSTLQSVFGYRTFREGQREVIEQICAGQDCLVIMPTGGGKSLCYQLPALVLPGLTVVV 71
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL+SL++DQ+ L+Q + A +L+ ++ E ++L+++ Y + KLLYV+PE++ ++
Sbjct: 72 SPLISLMKDQVDSLIQTGVSAAYLNSSLPREESLQVLQKMR--YGELKLLYVSPERLLQA 129
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
+ R L LN ++ IDEAHC+SQWGHDFRP+Y LG L+Q+FP P++ALTATA
Sbjct: 130 SFIDR-LHELN----VSLFAIDEAHCISQWGHDFRPEYAALGRLRQQFPQVPIMALTATA 184
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSL 619
+ + D+ + L + + SF+RPN+ VAE+L F + +
Sbjct: 185 DKATRADICERLTITPHSLL-TSFDRPNIRY---TVAEKLNAANQLRQFVDAQNGASGIV 240
Query: 620 EC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
C GH+A YH +RA VQ ++ KD+++I+ ATVAFGMGIN
Sbjct: 241 YCSSRRRVDEVAERLRLQGHQAEAYHAGKTQEERAEVQDKFLKDQLDIVVATVAFGMGIN 300
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
K +VR+V+H+ +PKS+E Y+QE GRAGRDG S ++ + +D RV+H+I Q
Sbjct: 301 KSNVRYVVHYDIPKSVESYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQS------ 354
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
PG + + L M ++ E CRR + L +F E K C
Sbjct: 355 -EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDEP-----ALKACG 397
Query: 784 NCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC +K + A+K++ + GQ+F +H++EV RGS + V + H+ LS
Sbjct: 398 NCDICLDPPKKYNGIQDAQKVLSCIYRIGQRFGINHLIEVLRGSKSASVIERGHDKLSTW 457
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK + ++R L+ +++ + S + +N S A ++ G ++L
Sbjct: 458 GIGKEKSHEHWLSVIRQLIHLGLATQDITR-------GSSVTLN-SSARAVLKGEVELLL 509
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + T + R++ P P LN KL++ L++LR
Sbjct: 510 AEPRIVIQT-------------------TKRRSNNPRAP-----LNYDRKLFARLKLLRR 545
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
L +E V Y +F +ATL ++ +P + E+L +NG+G+ K+ ++G L+ I
Sbjct: 546 TLAEEL--DVPPYLVFNDATLAEMAAILPTSPGEMLAVNGVGERKLERFGGEFLDEIADY 603
Query: 1023 IKE 1025
+ E
Sbjct: 604 LAE 606
>gi|407790669|ref|ZP_11137761.1| ATP-dependent DNA helicase RecQ [Gallaecimonas xiamenensis 3-C-1]
gi|407203006|gb|EKE72994.1| ATP-dependent DNA helicase RecQ [Gallaecimonas xiamenensis 3-C-1]
Length = 607
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 223/647 (34%), Positives = 341/647 (52%), Gaps = 83/647 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FRP Q+ +++A ++G D V+MPTGGGKSL YQ+PAL+ PG +VISPL+SL++
Sbjct: 22 VFGYDQFRPGQQAVVDAVVAGRDALVIMPTGGGKSLCYQVPALVLPGTAIVISPLISLMK 81
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL + A +L+ + +Q ++L +L+ + + LLYV+PE++++ D R LE
Sbjct: 82 DQVDQLLAMGVRAAYLNSALPRDQQWQVLNQLH--HGELDLLYVSPERLSQPDFQQRLLE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
++ +DEAHC+S WGHDFRP+Y LG LK+ FP P++ALTATA + ++D+
Sbjct: 140 IP-----ISLFAVDEAHCISSWGHDFRPEYMALGQLKRHFPQVPLMALTATADKATRQDI 194
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEKV-----------AERLQVGLSY-GHFFLLKEF 614
Q LGL + SF+RPN+ ++ EK +R Q G+ Y G + +
Sbjct: 195 QQRLGLDDPYFNLSSFDRPNIRYLVVEKFKPINQLLQYLEGQRGQSGIIYAGSRKRVDDI 254
Query: 615 YVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
G AA YH + +R FVQ + KDE++I+ ATVAFGMGINKPDVRFV H
Sbjct: 255 AQKLRGQGFNAAGYHAGLSNDERQFVQDAFQKDEVDIVVATVAFGMGINKPDVRFVAHFD 314
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI--SQGVAEQSPFTPGHNRFN 732
LPK+IE Y+QE GRAGRDG S + + D RV+ +I S+ A+Q
Sbjct: 315 LPKNIESYYQETGRAGRDGLPSEAWMLFEPGDVARVRSLIELSENEAQQ----------- 363
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L M + E + CRR + L +FG+ + C CD C +
Sbjct: 364 --------KVELMKLNAMAGFAEG-LTCRRQVLLNYFGQ-YSGERC-GNCDICLDPPQTL 412
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T+ A+K + + TGQ+F HI+EV RG +K+ H+ LS G GK
Sbjct: 413 --DGTELAQKAMSCIYRTGQRFGVGHIVEVLRGGQTARIKELGHDKLSTWGLGKDQGHDY 470
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
I+R L+ +M+++ + S L + ++ A ++ G + ++L P + K
Sbjct: 471 WVSIIRQLIHHGLVMQDITR-------QSALVLTEA-ARPVLKGERPLLLAVPRLVTRVK 522
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+++ T + ++V L++ L+ LR L E V
Sbjct: 523 QTRA--------------------TDNSAADKV-------LFARLKKLRKQLADEF--EV 553
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
Y +F +ATL ++ P ++ ELL I+G+G+ K+S+YG L I
Sbjct: 554 PPYVVFNDATLAEMASHFPTSDAELLAISGVGQTKLSRYGEPFLGLI 600
>gi|227114714|ref|ZP_03828370.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|403060389|ref|YP_006648606.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402807715|gb|AFR05353.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 608
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 223/655 (34%), Positives = 344/655 (52%), Gaps = 86/655 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EII+AT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q E++ + + KLLY+ PE++ +D L
Sbjct: 78 MKDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTG--QIKLLYIAPERLT-TDSFLDH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L A +A I +DEAHC+SQWGHDFRP+Y+ LG +KQ+FP+ P +ALTATA + +
Sbjct: 135 L----AHWQIALIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + +I SF+RPN LWM + +R + G+ Y +
Sbjct: 191 DIVRLLDLQSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQ--GQRGKSGIIYCNSRSR 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDICARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 309 VHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA--HCKKTCDNCSKI 788
+G L+ L M ++ E CRRL+ L +FGE A +C D +
Sbjct: 357 -----AGPQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQEACGNCDICLDPPKRY 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+E A+K + V GQ+F +++EV RG+ NQ ++ H+ L ++G GK
Sbjct: 411 DGLVE------AQKALSCVYRVGQRFGLGYVVEVLRGANNQRIRDFGHDKLPVYGIGKDK 464
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
++ +LR L+ L + + ++ S +++ +S A ++ G + L P I
Sbjct: 465 SQEHWVSVLRQLIHLGLLNQNI-------TMHSAVQLTES-ARPVLRGEMPLQLAVPRVI 516
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
N L P N Q N KL++ LR LR + E
Sbjct: 517 N--------------------LKPRAN------QKSYGGNYDRKLFAKLRKLRKSIADE- 549
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ + Y +F +ATL +++ +P T ELL ING+G K+ ++G + I +
Sbjct: 550 -DNIPPYVVFSDATLLEMAELMPITAGELLNINGVGHRKLERFGAPFMNMIRDHV 603
>gi|30692489|ref|NP_174421.2| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
gi|75334308|sp|Q9FT73.1|MED34_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 34;
AltName: Full=ATP-dependent DNA helicase Q-like 2;
AltName: Full=RecQ-like protein 2; Short=AtRecQ2;
Short=AtRecQl2
gi|11121445|emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana]
gi|332193225|gb|AEE31346.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
Length = 705
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 234/675 (34%), Positives = 340/675 (50%), Gaps = 102/675 (15%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ WS F W + + VFG +R NQ+EIINA M+G DV V+M GGGKSL YQL
Sbjct: 65 ENWSE-TFEWDSRADDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQL 123
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA++ G TLV+SPL+SLIQDQ+M L I A L+ ++ + + L K
Sbjct: 124 PAMLRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLK 183
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
+LYVTPEKV+KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ L ILK +F
Sbjct: 184 ILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQF 243
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW-----------MDCEKVA 596
P P++ALTATAT V+ D+++ L + C+ F S NRPNL+ + +++A
Sbjct: 244 PKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIA 303
Query: 597 ERLQVGLSYG-----HFFLLKEFYVVS---LECGHKAAFYHGSIDPAQRAFVQKQWSKDE 648
E ++ S + F KE ++ E G A +YH +D R V +WSK++
Sbjct: 304 EFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNK 363
Query: 649 INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFI 708
+ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+L++ +D
Sbjct: 364 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVP 423
Query: 709 RVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVH 768
R M+ E S +NL +V YC++ CRR H
Sbjct: 424 RQSSMV---FYEYSGL--------------------QNLYDIVRYCQSKTKCRRSAFFRH 460
Query: 769 FGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLN 828
FGE S C CDNC+ E DV+D +K +V +V+ T + +L++ N
Sbjct: 461 FGEP--SQDCNGMCDNCALSSEVKEVDVSDLSKLVVSMVQETQAKDQRVTMLQLGDKLRN 518
Query: 829 QYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK----KSDVYGSVSSVLK 884
+H+ L L + E ++ L+++ L EE + ++ Y ++ +
Sbjct: 519 ------KHKDLI-----AELKRDEVEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPL-- 565
Query: 885 VNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNE 944
A+ L+ GR+ + + ++ TK K +T S L KL R +
Sbjct: 566 -----ANQLLQGRKTI--KMETSSRQTKKLKRSIT---FSGLELKLDELRKE-------- 607
Query: 945 VDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIG 1004
+ A ++ + + + +S + P + +EL I IG
Sbjct: 608 --------------------ISAADGSILPHTVLSTQQIGSISSQKPVSLQELESI--IG 645
Query: 1005 KAKVSKYGVRLLETI 1019
K K KYG R+LE +
Sbjct: 646 KLKTEKYGDRILEEV 660
>gi|312881433|ref|ZP_07741228.1| ATP-dependent DNA helicase RecQ [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370915|gb|EFP98372.1| ATP-dependent DNA helicase RecQ [Vibrio caribbenthicus ATCC BAA-2122]
Length = 612
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 225/648 (34%), Positives = 347/648 (53%), Gaps = 81/648 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
+FG SFR Q+E+I ++G D V++PTGGGKSL YQ+PAL+ G+TLVISPL+SL++
Sbjct: 24 IFGYQSFRCGQQEVIECAVTGQDSLVILPTGGGKSLCYQIPALVRSGLTLVISPLISLMK 83
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L+ + A +++ M+ E + +N + K L+YV+PE+V D + R L+
Sbjct: 84 DQVDQLVANGVAAGYVNSTMDREELVNTYKRMNDGHIK--LIYVSPERVLMRDFIER-LD 140
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FP+ P +ALTATA + ++D+
Sbjct: 141 NLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPSVPFMALTATADDATRKDI 196
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-CEKVAERLQV-----------GLSYGHFFLLKEFY 615
+Q L L + SF+RPN+ + EK QV G+ Y E
Sbjct: 197 LQRLQLKEPFSYLGSFDRPNIRYNLIEKHKPVSQVVRFLEGQRGCSGIIYCGSRKKVEML 256
Query: 616 VVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L C G +AA YH +D +RA+VQ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 257 TEKL-CNNGLRAASYHAGLDVDERAYVQDAFQRDDIQIVVATVAFGMGINKPNVRFVVHF 315
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 316 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADIGWLRRMLDE----------------- 358
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIKSFI 792
+ G + L M ++ E CRR + L +FGE + C CD C K F
Sbjct: 359 KDDGPQKQVEAHKLNAMSAFAEAQT-CRRQVLLNYFGE-YRHEPC-GNCDICLDPPKHF- 414
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T+ A+K + V Q F +++EV RG N ++++ H+ LS +G G+ +
Sbjct: 415 --DATEQARKALSCVYRVNQSFGMGYVVEVLRGMQNIRIRENGHDKLSTYGLGRDNSHDY 472
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
I R LV + L + + + +S L++ ++A L+ G N+ L P +T+
Sbjct: 473 WVSIFRQLVHKGLLFQNITR-------NSTLQLT-AEARPLLRGEINLELAVPRLDTATR 524
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+KSD +K N KL++ LR LR + E +G+
Sbjct: 525 AAKSDKLSSK-------------------------NYDKKLFAKLRKLRKAIADE--DGL 557
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 558 PPYVVFNDATLIDMAEILPTSYGEMLAVNGVGQTKLDKYADPFLDLIQ 605
>gi|423684806|ref|ZP_17659614.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri SR5]
gi|371495853|gb|EHN71447.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri SR5]
Length = 608
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 229/652 (35%), Positives = 351/652 (53%), Gaps = 85/652 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG FR Q E+INA + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 18 KDVFGYQEFRVGQEEVINAVLDGKDCLVIMPTGGGKSLCYQIPALVFEGLTLVISPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +E EQ I +NS + K+LYV+PE+V D + R
Sbjct: 78 MKDQVDQLKANGVKAECLNSTIEREEQIAIWNRVNSG--QVKMLYVSPERVMMRDFMDR- 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LESLN L I +DEAHC+SQWGHDFRP+Y LG +KQ+FP+ P++ALTATA + ++
Sbjct: 135 LESLN----LCMIAVDEAHCISQWGHDFRPEYASLGQIKQRFPSVPIMALTATADEATRK 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++ L L + SF+RPN+ + EK ++ Q G+ Y E
Sbjct: 191 DILHRLSLPEPHQYLGSFDRPNIRYTVLEKHKPVSQIVRYLATQKNQCGVIYCGSRKKVE 250
Query: 614 FYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L H +AA YH +D +R +VQ+ + +D+I I+ ATVAFGMGINK +VRFV H
Sbjct: 251 MLTEKLCNNHIRAASYHAGLDLDERNYVQEAFQRDDIQIVVATVAFGMGINKSNVRFVAH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+PK+IE Y+QE GRAGRDG + V+ Y +D + ++ ++ E+ P P
Sbjct: 311 FDIPKNIESYYQETGRAGRDGLPAEAVMLYDPADIVWLRKLV-----EEKPEGP------ 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+++E++ N M ++ E CRR + L +FGE + K C NC
Sbjct: 360 ----QKLVESHKLN--AMTAFAEAQT-CRRQVLLNYFGE-----YSAKPCGNCDVCLDPP 407
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG +++H H+ LS +G GK
Sbjct: 408 KQF---DGTEAAQKALSCVYRVNQSFGVGYVVEVLRGLKIARIREHGHDKLSTYGIGKEH 464
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
I+R L+ + L++ + + +S L++ + +A ++ G++ + L P
Sbjct: 465 THEYWVSIIRQLIHKGLLVQNITR-------NSTLQLTE-EARPILKGQEPLELAVPRLD 516
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ K +KS+ KL+ + N +L++ LR LR +
Sbjct: 517 IAAKTAKSE-----------KLN--------------NRNYDKQLFAKLRKLRKSIADR- 550
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ + Y +F +ATL ++ +P + E+L +NG+G+ K+ KY L+ IE
Sbjct: 551 -DDLPPYVVFSDATLMDMADILPTSYGEMLAVNGVGQKKLEKYADPFLDLIE 601
>gi|428224630|ref|YP_007108727.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
gi|427984531|gb|AFY65675.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
Length = 741
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 361/679 (53%), Gaps = 99/679 (14%)
Query: 376 PWTKK---LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC 432
P+ K LE K FG SFRP QREI+ A + DV V+MPTGGGKSL +QLPAL+
Sbjct: 7 PYASKFDTLEDALKHFFGYESFRPGQREIVEAALDRRDVMVIMPTGGGKSLCFQLPALLN 66
Query: 433 PGITLVISPLVSLIQDQIMHLLQANIPATFL----SGNMEWTEQQEILRELNSDYCKYKL 488
G+++V+SPL++L+QDQ+ L + + ATFL SG + Q EIL + KL
Sbjct: 67 SGVSVVVSPLIALMQDQVASLQKNGVGATFLNSSISGEEVRSRQNEILD------GRIKL 120
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYV PE++ LL L + + L+ VIDEAHCVS+WGHDFRP+Y+ L ++Q+FP
Sbjct: 121 LYVAPERLLNEQFLL-WLNDVRQQVGLSTFVIDEAHCVSEWGHDFRPEYRQLLQIRQRFP 179
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHF 608
PV+ALTATAT V++D+ + L L + SFNRPNL+ + + SY
Sbjct: 180 EVPVMALTATATDRVRQDMGEQLALRQPYVHIASFNRPNLYYEVRPKGKN-----SYDE- 233
Query: 609 FLLKEFYVVSLEC--------------------GHKAAFYHGSIDPAQRAFVQKQWSKDE 648
LL++ V C G +A YH + R Q ++ +D+
Sbjct: 234 -LLQKIRHVEGSCIVYCLSRRRVNELTTRLQQEGIEALPYHAGLSDDVRTENQTRFIRDD 292
Query: 649 INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFI 708
+ +I AT+AFGMGINKPDVR V+H+ LP++IE Y+QE GRAGRDG+ + C+L+Y D
Sbjct: 293 VRVIVATIAFGMGINKPDVRLVMHYDLPRNIEAYYQESGRAGRDGETAQCLLFYGPGDIK 352
Query: 709 RVKHMISQGVAEQSPFT--PGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQL 766
+ +I Q V P T P +A + L +++ Y E+ V CRR +QL
Sbjct: 353 SLDWIIDQKV---HPVTGEPLEQEQRIAR---------QQLRQVIDYAESTV-CRRTIQL 399
Query: 767 VHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGS 826
+FGE+F +C + CDNC K +D T A+K + V ++F ++I++V RGS
Sbjct: 400 SYFGEEF-PGNC-QNCDNCLHPKPL--EDWTIEAQKFLSCVARCRERFGVNYIIDVLRGS 455
Query: 827 LNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVN 886
N+ V + H+ LS +G G+ + +A R L +I L++E SD + SVLK+N
Sbjct: 456 KNKKVLSNGHQALSTYGIGRDRS-VDAWRSLARTLIHQGLVDET--SDGF----SVLKLN 508
Query: 887 QSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVD 946
+ ++ +Q VL PA+ L + ++ Q E +
Sbjct: 509 AASWE--VMRKQRTVL-------------VAALPAEPVL----------EARAEAQIEAE 543
Query: 947 LNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKA 1006
+ L+ LR LR L E + + Y +F +++L+ ++++ P T ++ I+G+G
Sbjct: 544 M-----LFERLRSLRKQLADE--QAIAPYMVFADSSLRLMAQQRPTTLQQFAGISGVGSH 596
Query: 1007 KVSKYGVRLLETIESTIKE 1025
K++ YG R + I +E
Sbjct: 597 KLALYGDRFIAEIRDYCEE 615
>gi|428773638|ref|YP_007165426.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
gi|428687917|gb|AFZ47777.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
Length = 713
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 229/653 (35%), Positives = 356/653 (54%), Gaps = 75/653 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFRP Q +I+ ++ D+ V+MPTGGGKSL +QLPAL+ G+T+VISPL+SL
Sbjct: 9 KKYFGYDSFRPGQEKIVQDAIAHKDLLVIMPTGGGKSLCFQLPALLKQGVTIVISPLISL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L I AT+L+ + + +Q +R+ + K KLLY+ PE++ SD
Sbjct: 69 MQDQVTALQDNGIGATYLNSTLNY--EQTKIRQRDILAGKIKLLYLAPERLV-SDTFQPF 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L +L + +A IDEAHC+S+WGHDFR +Y+ + L+Q+FP P+ ALTATAT V+
Sbjct: 126 LVTLAQKIGIAAFAIDEAHCISEWGHDFRQEYRQMRYLRQQFPQVPITALTATATVRVQR 185
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAER-----LQVGLSY---GHFFLL-----K 612
D+++ L L N I R SFNR NL+ + ++ R L + S+ G + + +
Sbjct: 186 DIIEQLNLRNPQIHRFSFNRQNLYYEVQEKERRAYNQLLHIIRSHQGSGIVYCISRKSTE 245
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E ++ G A YH + R+ Q + +D++ I+ ATVAFGMGINKPDVR V+H
Sbjct: 246 EIAERLVKDGVSALPYHAGLSDKVRSHYQTSFIRDDVRIMVATVAFGMGINKPDVRLVVH 305
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LP++IE Y+QE GRAGRDG++++C+L YS D ++ + I Q P +
Sbjct: 306 YDLPRNIESYYQESGRAGRDGEKANCILLYSRGDKQKIHYFIRQKT------NPQEQKIA 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
A +V+E N CRR+ QL +FGEKF C CDNC K
Sbjct: 360 YAQLAKVIEYADTNY------------CRRIPQLSYFGEKF-KGDC-GNCDNCLNPKPI- 404
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+D T A+K + V T Q+F HI++V RGS ++ + ++ H LS +G GK E
Sbjct: 405 -EDWTIEAQKFLSCVYRTNQRFGIKHIIDVLRGSRDKKIYEYGHHLLSTYGIGKDHTTDE 463
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ LV ++ + + +D + ++LK+N+ ++ ++ G + V + A+
Sbjct: 464 WKNLATSLVYQNLVRQT---NDGF----NILKINE-QSKKILKGEKKVYI----AVKGKT 511
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ K VT DT SQ EV++ L + L+MLR L E +
Sbjct: 512 IKK--VT---------------RDTNSQAL-EVEI-----LLNKLKMLRKKLADL--ENI 546
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
Y IF +ATL +++ P T+ + +++G+ K++KYG + I + I++
Sbjct: 547 APYVIFNDATLTIMAQMQPDTKAKFAQLSGVNDYKLNKYGDIFISEIRTFIQQ 599
>gi|172036703|ref|YP_001803204.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|354554517|ref|ZP_08973821.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
gi|171698157|gb|ACB51138.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|353553326|gb|EHC22718.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
Length = 711
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 230/659 (34%), Positives = 362/659 (54%), Gaps = 79/659 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FR Q++IIN ++ D+ V+MPTGGGKSL +QLPAL+ G+ +V+S
Sbjct: 8 LENALKYFFGYDQFRSGQKQIINEALNNKDLLVIMPTGGGKSLCFQLPALLKSGVCIVVS 67
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ LL I ATFL+ + E Q RE K KLLYV PE++ +D
Sbjct: 68 PLIALMQDQVDTLLDNGIGATFLNSTLNREELQS--RENAILKGKIKLLYVAPERLL-ND 124
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ L + L+ IDEAHCVS WGHDFRP+Y+ L L+ ++P P+ ALTATAT
Sbjct: 125 NFLNFLDFLRQKVGLSGFAIDEAHCVSAWGHDFRPEYRQLKQLRFRYPQVPMFALTATAT 184
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL--------SYGHFFLLK 612
V+ D+++ LGL N + SF+RPNL+ + ++ + R L G + L
Sbjct: 185 KRVRADIIEQLGLQNPTVHVASFDRPNLYYEVQEKSRRSYTQLLNYVRSQEGSGIIYCLS 244
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V ++ + G +A YH + +RA Q ++ +D++ II AT+AFGMGINKPDV
Sbjct: 245 RKNVETIAFRLQQDGIEALPYHAGMYDDERAVNQTRFIRDDVRIIVATIAFGMGINKPDV 304
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ LP+++E Y+QE GRAGRDG+ ++C L++S+ D R++++I Q + E+
Sbjct: 305 RFVVHYDLPRNLESYYQESGRAGRDGEPANCALFFSFGDLKRLEYLIDQKIDEKE----- 359
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
GR + + ++V Y E +CRR + L +FG+++ C CDNC+
Sbjct: 360 ------QRVGR------QQVRQVVDYAEG-TECRRSIILRYFGQQY-KGKC-DNCDNCNY 404
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K +D T A+K + V ++F SHI++V RGS + ++K+ H LS +G GK
Sbjct: 405 PKPI--EDWTIEAQKFLSCVARCQERFGMSHIIDVLRGSKKKKIEKYGHHLLSTYGIGKD 462
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ +E + R L+ + F+ E +D + SVLK+N+ ++ I R
Sbjct: 463 KSVAEWKMLGRSLIHQGFVNE---TTDGF----SVLKLNK---YSWEIFRNE-------- 504
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
K ++ K S K+ S + P + ++++ L LR LR L +
Sbjct: 505 ------RKVEIAITK----SLKVKASNDYNPRKAESDL-------LLHQLRKLRKHLADQ 547
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
V Y +F +++L+ +++ P+T E +I+G+ K +YG ++ S I+EF
Sbjct: 548 --NKVAPYVVFADSSLRLMAQIKPQTIEAFKKISGVTAYKAEQYG----DSFVSEIREF 600
>gi|197333996|ref|YP_002154839.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri MJ11]
gi|197315486|gb|ACH64933.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri MJ11]
Length = 611
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 228/652 (34%), Positives = 352/652 (53%), Gaps = 85/652 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG FR Q E+INA + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 21 KDVFGYQEFRVGQEEVINAVLEGKDSLVIMPTGGGKSLCYQIPALVFEGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +E EQ I +N+ + K+LYV+PE+V D + R
Sbjct: 81 MKDQVDQLKANGVKAECLNSTIEREEQIAIWNRVNAG--QVKMLYVSPERVMMRDFMDR- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LESLN L I +DEAHC+SQWGHDFRP+Y LG +KQ+FP+ P++ALTATA + ++
Sbjct: 138 LESLN----LCMIAVDEAHCISQWGHDFRPEYASLGQIKQRFPSVPIMALTATADEATRK 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++ L L + + SF+RPN+ + EK ++ Q G+ Y E
Sbjct: 194 DILHRLSLPDPHQYLGSFDRPNIRYTVLEKHKPVSQIVRYLATQKNQCGVIYCGSRKKVE 253
Query: 614 FYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L H +AA YH +D +R +VQ+ + +D+I I+ ATVAFGMGINK +VRFV H
Sbjct: 254 MLTEKLCNNHIRAASYHAGLDLDERNYVQEAFQRDDIQIVVATVAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+PK+IE Y+QE GRAGRDG + V+ Y +D + ++ ++ E+ P P
Sbjct: 314 FDIPKNIESYYQETGRAGRDGLPAEAVMLYDPADIVWLRKLV-----EEKPEGP------ 362
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+++E++ N M ++ E CRR + L +FGE + K C NC
Sbjct: 363 ----QKLVESHKLN--AMTAFAEAQT-CRRQVLLNYFGE-----YSAKPCGNCDVCLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG +++H H+ LS +G GK
Sbjct: 411 KQF---DGTEAAQKALSCVYRVNQSFGVGYVVEVLRGLKIARIREHGHDKLSTYGIGKEH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
I+R L+ + L++ + + +S L++ + +A ++ G++ + L P
Sbjct: 468 THEYWVSIIRQLIHKGLLVQNITR-------NSTLQLTE-EARPILKGQEPLELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ K +KS+ KL+ + N +L++ LR LR +
Sbjct: 520 IAAKTAKSE-----------KLN--------------NRNYDKQLFAKLRKLRKSIADR- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ + Y +F +ATL ++ +P + E+L +NG+G+ K+ KY L+ IE
Sbjct: 554 -DDLPPYVVFSDATLMDMADILPTSYGEMLAVNGVGQKKLEKYADPFLDLIE 604
>gi|399024201|ref|ZP_10726247.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
gi|398081075|gb|EJL71860.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
Length = 734
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 230/665 (34%), Positives = 351/665 (52%), Gaps = 79/665 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L KK FG +F+ Q +II + G D+FVLMPTGGGKSL YQLPALI G +V+S
Sbjct: 8 LSGELKKYFGFSTFKGQQEQIIENLLDGKDIFVLMPTGGGKSLCYQLPALISEGTAIVVS 67
Query: 441 PLVSLIQDQI---MHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
PL++L+++Q+ L + A L+ ++ T+ +++ ++ S K KLLYV PE +
Sbjct: 68 PLIALMKNQVDAVNGLSSDDGVAHVLNSSLNKTQTKQVFDDIKS--GKTKLLYVAPESLI 125
Query: 498 KSDVL--LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLAL 555
K D L L+++ ++ IDEAHC+S+WGHDFRP+Y+ L ++ K N PV+AL
Sbjct: 126 KEDYLDFLKEVT-------ISFFAIDEAHCISEWGHDFRPEYRNLKLIIDKIANVPVIAL 178
Query: 556 TATATASVKEDVVQALGLVNCIIFRQSFNRPNLW--------MDCEKVAERLQVGLSYGH 607
TATAT V++D+ + LG+ N ++F++SFNRPNL+ +D E V Q G
Sbjct: 179 TATATPKVQDDIQKTLGMANALVFKESFNRPNLYYEVRPKVNVDKEIVKFINQHKGKSGI 238
Query: 608 FFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
+ L +EF + G A YH +D R Q ++ +E+++I AT+AFGMGI
Sbjct: 239 VYCLSRRKVEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGI 298
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
+KPDVRFVIH+ PKS+E Y+QE GRAGRDG C+ +Y D +++ ++Q
Sbjct: 299 DKPDVRFVIHYDFPKSLESYYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQ------ 352
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD--SAHCKK 780
P R E + L +V Y E + RR L +FGE FD + K
Sbjct: 353 --KPVSER----------EIGLQLLNEVVGYAETSM-SRRQYILYYFGEIFDPVTGEGAK 399
Query: 781 TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
CDN S KD TD KK++EL+K TG++F S ++ V G N K ++ E S
Sbjct: 400 MCDNASDPPKL--KDATDDLKKVLELIKDTGEKFKSKDLISVIAGKENAVTKSYKLEQSS 457
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
G GK + ILR +++FL +++ + YG VLK+ + K ++ G
Sbjct: 458 HFGFGKEEKDNYWKTILRQATVQNFLQKDI---ETYG----VLKIAE-KGQLVLKGE--- 506
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
L I + + D+T AK Q Q + L L+ L+ L
Sbjct: 507 -LEHSFLIAEDR--EFDLTQAKAE-------------SDQIQMQSGGGLDQNLFGQLKEL 550
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + K+ G+ Y +F + +L+ ++ + P T EE+ +I G+G+ K KYG + I+
Sbjct: 551 RKKVAKKY--GIPPYTVFMDPSLEDMTVQYPITVEEIAKIYGVGEGKAKKYGKEFADFIK 608
Query: 1021 STIKE 1025
+ +++
Sbjct: 609 TYVED 613
>gi|336313085|ref|ZP_08568028.1| ATP-dependent DNA helicase RecQ [Shewanella sp. HN-41]
gi|335863205|gb|EGM68363.1| ATP-dependent DNA helicase RecQ [Shewanella sp. HN-41]
Length = 607
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 224/667 (33%), Positives = 352/667 (52%), Gaps = 89/667 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I +G D V+MPTGGGKSL YQLPAL+
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCNGQDCLVIMPTGGGKSLCYQLPALLMD 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ ++ + E+LR+L + + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLR--HGELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R ++S+ LA IDEAHC+SQWGHDFRP+Y LG LKQ FP P++
Sbjct: 124 ERLLTADFIER-MQSMP----LAMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPYVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++ + + LG ++ SF+RPN+ VAE+L HF L +
Sbjct: 179 ALTATADLATRQSICERLG-IDPYRLLSSFDRPNIRY---TVAEKLNAANQLRHFLLQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + +R VQ + KD+I+I+ ATVA
Sbjct: 235 GSSGIIYCSSRRRVDEVADRLCQQGFNAKAYHAGMTQEERGTVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + V H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIYRLGQRFGINHLIEVLRGSRSAPVVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ L+ G GK + ++R L+ ++V + S + +N S A ++ G
Sbjct: 452 DKLTTWGIGKDKSHEYWLSVIRQLIHLGLASQDVTR-------GSSITLNPS-ARPILKG 503
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSS 956
++L P +T K+ Q++ LN KL++
Sbjct: 504 DVALMLAEPRISLTTTKRKTG------------------------QSKAPLNYDRKLFAR 539
Query: 957 LRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
L++LR + ++ + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G L
Sbjct: 540 LKLLRRTIAEQ--QDVPPYLVFNDATLAEMAAMMPTSAGEMLAVNGVGERKLSRFGDAFL 597
Query: 1017 ETIESTI 1023
+ I + +
Sbjct: 598 DEIAAYL 604
>gi|325982577|ref|YP_004294979.1| ATP-dependent DNA helicase RecQ [Nitrosomonas sp. AL212]
gi|325532096|gb|ADZ26817.1| ATP-dependent DNA helicase RecQ [Nitrosomonas sp. AL212]
Length = 651
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 232/649 (35%), Positives = 347/649 (53%), Gaps = 75/649 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+VFG +FR Q E+I G D VLMPTGGGKSL YQ+PAL+ G+ +V+SPL++L
Sbjct: 60 KEVFGYPAFRGQQAEVIAHLAGGGDCLVLMPTGGGKSLCYQIPALLRNGVAIVVSPLIAL 119
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+ +Q+ L + + A L+ ++ E + ++L +D +Y LLYV PE++ + L
Sbjct: 120 MHNQVTALHEIGVRAAVLNSSLSQQEAIRVEQKLLAD--EYDLLYVAPERLLTARFL--- 174
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+L R +A IDEAHCVSQWGHDFRP+Y L IL ++FP P +ALTATA ++
Sbjct: 175 --NLMTRIPIALFAIDEAHCVSQWGHDFRPEYIQLSILHERFPAIPRIALTATADMDTRK 232
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSY---------GHFFLL---- 611
++++ LGL +F SF+RPN+ + +K R Q+ L++ G + L
Sbjct: 233 EIIERLGLDLAKVFVSSFDRPNIRYQIIDKTNSRSQL-LAFIQTEHPSDAGIVYCLSRKK 291
Query: 612 -KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
+E + ++ G A YH + QR+ Q+++ ++E I+ AT+AFGMGI+KP+VRFV
Sbjct: 292 VEEITLWLVKQGLNAVAYHAGMSMHQRSLNQEKFLREESIIMVATIAFGMGIDKPNVRFV 351
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
H LPKSIEGY+QE GRAGRDGQ ++ + Y D I+ + MI + A Q F G
Sbjct: 352 AHLDLPKSIEGYYQETGRAGRDGQAANAWMAYGLGDVIQQRRMIEESEA-QVKFKQG--- 407
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ R LE M+S CE CRR+ L +FGE+ D+A CD C
Sbjct: 408 -----AARKLEA-------MLSLCET-TTCRRIRMLSYFGERIDTAAGCGNCDICLNPPK 454
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
D T +K + TGQ F + H+++V RG+L VK+ H+ +S G GK+L +
Sbjct: 455 VW--DATVEVQKAMSCAYRTGQIFGAGHLIDVLRGNLTDRVKEWHHDRISTFGIGKNLPE 512
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R +V L + S+ +G++ + ++ G+QNV LR
Sbjct: 513 KTWRAIFRQIVALGLLTPD---SEGHGALHLT-----EASRAVLKGQQNVYLR-----QQ 559
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
T+ + +LS R+ P + + L+ LR R KE
Sbjct: 560 TR--------------TEQLSKKRHGDDLTPLDSTE----RYLWEQLRSWRAKTAKE--H 599
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
GV AY IF +ATL L + P+TE+EL ++ G+G K+ KYGV L++ +
Sbjct: 600 GVPAYVIFHDATLHELVRLCPKTEDELSQVTGVGARKLDKYGVYLMQIL 648
>gi|147919945|ref|YP_686301.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
gi|110621697|emb|CAJ36975.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
Length = 605
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 226/653 (34%), Positives = 340/653 (52%), Gaps = 81/653 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG +FRP Q EI+ + G DV ++ TGGGKSL YQLPAL+ G+T+V+SPL+SL
Sbjct: 15 ERYFGYSTFRPFQEEIVTDVLEGRDVLAIIATGGGKSLCYQLPALVSGGLTIVVSPLISL 74
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL NI A L+ +ME E + I +L K K+LY++PE++ + D L+
Sbjct: 75 MKDQVDDLLARNISAATLNSSMELWEIRSIEDQLLGG--KIKVLYISPERITQ-DSCLQF 131
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE L+ + I IDEAHC+S WGH FRPDY+ L +LK KFP P++ALTA+A V+E
Sbjct: 132 LEKLDVK----LIAIDEAHCISMWGHQFRPDYRRLSLLKSKFPKVPMIALTASAIPEVRE 187
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D+ L LV+ + SFNR NL + + + LSY G + L
Sbjct: 188 DIASQLKLVSPKKYLGSFNRINLRYEVREKKDATAQILSYIARNRGKSGIVYCLARKTTE 247
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KA YH + R+ Q+++ +D++ ++CATVAFGMGI+KPDVR+VIH
Sbjct: 248 ELAEKLRRAGIKALPYHADLPDTVRSATQEKFVRDDVEVVCATVAFGMGIDKPDVRYVIH 307
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK++E Y+QE GRAGRDG+ S C+++YS +D ++++ ++ + +T H
Sbjct: 308 YDMPKNLEAYYQETGRAGRDGEASDCIMFYSPADALKMRGLL------EKEYTDYH---- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ + M +CE + CRR L +FGE++D C CDNC K I
Sbjct: 358 ------LSRVAMKKWQAMRDFCETRL-CRRKYLLSYFGEEYDDPAC-DGCDNCLHPKDTI 409
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D D A K+V V G +F + H+ +V GS NQ + +RH + GK + +
Sbjct: 410 --DGRDIANKIVTCVTALGGKFGAGHVADVICGSSNQTIIAYRHNRNPAYNTGKPYTRVQ 467
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVN-QSKAHNLIIGRQNVVLRFPSAINST 911
++ LV +L V G V+ N +SK I Q + L P T
Sbjct: 468 WIGFIKELVRLGYL-------SVAGDKYPVITTNSRSKEVTFI---QELRLTRP-----T 512
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
++ PA V A+L+ LR LR + G
Sbjct: 513 SGGEAAFKPA-----------------------VQEKYDARLFQQLRSLRKSIAD--ANG 547
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
Y +F + TL+ ++ P+T EL +I+G+GKAK+ KYG + I+ ++
Sbjct: 548 WPPYVVFHDTTLREMATTCPKTLAELSKISGVGKAKLEKYGGEFVGVIKGYVE 600
>gi|441506545|ref|ZP_20988513.1| ATP-dependent DNA helicase RecQ [Photobacterium sp. AK15]
gi|441425751|gb|ELR63245.1| ATP-dependent DNA helicase RecQ [Photobacterium sp. AK15]
Length = 613
Score = 353 bits (907), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 223/653 (34%), Positives = 344/653 (52%), Gaps = 87/653 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG +FR Q+E+I A G D V+MPTGGGKSL YQ+PAL+C G+TLV+SPL+SL
Sbjct: 22 QDVFGYQTFRTGQQEVIEAVAEGRDCLVIMPTGGGKSLCYQIPALMCDGLTLVVSPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ QE R + + KL YV+PE+V + + R
Sbjct: 82 MKDQVDQLKANGVAAACLNSTQSREAMQETYRAMQDG--EVKLAYVSPERVMTREFMER- 138
Query: 506 LESLNAREL-LARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
R++ L+ + +DEAHC+SQWGHDFRP+Y LG LKQ F P++ALTATA + +
Sbjct: 139 -----LRDMPLSLVAVDEAHCISQWGHDFRPEYAALGTLKQHFDQLPIIALTATADETTR 193
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE------------RLQVGLSYGHFFLLK 612
+D++ L L + I+ SF+RPN+ ++ + R Q G+ Y +
Sbjct: 194 QDILSRLSLTDPHIYLGSFDRPNIRYTLQEKYKPMSQLSSYLRGVRGQCGIVYCNSRKRV 253
Query: 613 EFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
E L E G +AA YH ++ +RA VQ+ + +D+I+I+ ATVAFGMGINKP+VRFV+
Sbjct: 254 EQITEKLCESGIRAAAYHAGLEFDERARVQEDFQRDDIHIVVATVAFGMGINKPNVRFVV 313
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ +P++IE Y+QE GRAGRDG + V++Y SD ++ + +
Sbjct: 314 HYDIPRNIESYYQETGRAGRDGLPAEAVMFYDPSDLAWLRRCLDE--------------- 358
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI--- 788
G + + L M ++ E CRR + L +FGE + ++ C NC
Sbjct: 359 --KEDGAQKQIESHKLNAMGAFAEAQT-CRRQVLLNYFGE-----YREEPCGNCDICLDP 410
Query: 789 -KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K F +V A+K + V Q F +H+++V RG NQ +++ H+ LS HG G+
Sbjct: 411 PKRFAAVEV---AQKALSCVYRVNQSFGVNHVVDVLRGMQNQRIRELGHDKLSTHGIGRE 467
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ ILR L+ +L++ + + SS L++ + KA ++ G + L P
Sbjct: 468 HSHEFWVSILRQLIHRGYLVQNIVR-------SSTLQLTE-KARGVLRGEVELELAVPRL 519
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ + +K+D KL+ D KL++ LR LR + E
Sbjct: 520 DIAARSAKND-----------KLASRHYDK--------------KLFAKLRKLRKAIADE 554
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATL +++ +P + ELL +NG+G K+ KYG L IE
Sbjct: 555 --EDLPPYVVFNDATLMEMAEMLPTSAGELLAVNGVGHRKLEKYGDAFLTLIE 605
>gi|227325786|ref|ZP_03829810.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 609
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 223/655 (34%), Positives = 344/655 (52%), Gaps = 86/655 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EII+AT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q E++ + + KLLY+ PE++ +D L
Sbjct: 78 MKDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTG--QIKLLYIAPERLT-TDSFLDH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L A ++ I +DEAHC+SQWGHDFRP+Y+ LG +KQ+FP+ P +ALTATA + +
Sbjct: 135 L----AHWQISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + +I SF+RPN LWM + +R + G+ Y +
Sbjct: 191 DIVRLLDLQSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQ--GQRGKSGIIYCNSRSR 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDICARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 309 VHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA--HCKKTCDNCSKI 788
+G L+ L M ++ E CRRL+ L +FGE A +C D +
Sbjct: 357 -----AGPQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQQACGNCDICLDPPKRY 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+E A+K + V GQ+F +I+EV RG+ NQ ++ H+ L ++G GK
Sbjct: 411 DGLVE------AQKALSCVYRVGQRFGLGYIVEVLRGANNQRIRDFGHDKLPVYGIGKEK 464
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
++ +LR L+ L + + ++ S +++ +S A ++ G + L P I
Sbjct: 465 SQEHWVSVLRQLIHLGLLNQNI-------TMHSAVQLTES-ARPVLRGEMPLQLAVPRVI 516
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
N L P N Q N KL++ LR LR + E
Sbjct: 517 N--------------------LKPRAN------QKSYGGNYDRKLFAKLRKLRKSIADE- 549
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ + Y +F +ATL +++ +P T ELL ING+G K+ ++G + I +
Sbjct: 550 -DNIPPYVVFSDATLLEMAELMPITAGELLNINGVGHRKLERFGAPFMNMIRDHV 603
>gi|386312124|ref|YP_006008289.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens 200]
gi|319424749|gb|ADV52823.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens 200]
Length = 607
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 224/667 (33%), Positives = 349/667 (52%), Gaps = 89/667 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I G D V+MPTGGGKSL YQLPAL+
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALMMN 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ ++ + E+LR+L + + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLR--HGELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R ++SL LA IDEAHC+SQWGHDFRP+Y LG LKQ FP P++
Sbjct: 124 ERLLTADFIER-MQSLQ----LAMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPYVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++ + + LG ++ SF+RPN+ VAE+L HF L +
Sbjct: 179 ALTATADQATRQSICERLG-IDPYRLLSSFDRPNIRY---TVAEKLNAANQLRHFLLQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + R VQ + KD+I+I+ ATVA
Sbjct: 235 GSSGIIYCSSRRRVDEVADRLCLQGFNAKAYHAGMTQEDRGAVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIYRLGQRFGINHLIEVLRGSKGAPIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ L+ G GK + ++R L+ ++V + S + +N S A ++ G
Sbjct: 452 DKLTTWGIGKDKSHEYWLSVIRQLIHLGLASQDVTR-------GSSITLNPS-ARPVLKG 503
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSS 956
++L P +T K+ Q++ LN KL++
Sbjct: 504 EVALMLAEPRIQLTTTKRKAS------------------------QSKAPLNYDRKLFAR 539
Query: 957 LRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
L++LR + ++ + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G L
Sbjct: 540 LKLLRRTIAEQ--QDVPPYLVFNDATLAEMAAMMPTSAGEMLAVNGVGERKLSRFGDDFL 597
Query: 1017 ETIESTI 1023
+ I + +
Sbjct: 598 DEIAAYL 604
>gi|190575547|ref|YP_001973392.1| ATP-dependent DNA helicase [Stenotrophomonas maltophilia K279a]
gi|190013469|emb|CAQ47104.1| putative ATP-dependent DNA helicase [Stenotrophomonas maltophilia
K279a]
Length = 601
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 228/647 (35%), Positives = 346/647 (53%), Gaps = 73/647 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q++I+ +GHD VLMPTGGGKSL YQ+PAL+ G +VISPL++L
Sbjct: 11 QRVFGYDDFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQVPALLRDGCGIVISPLIAL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ + REL + + +LYV PE++ L
Sbjct: 71 MQDQVEALRQLGVRAEYLNSTLDAETAGRVERELLAG--ELDMLYVAPERLLTGRFL--- 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL +R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P P +ALTATA +
Sbjct: 126 --SLLSRSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQIPRIALTATADPPTQR 183
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-GLSYGHFFLLKEFYVVS----- 618
++ + L L F SF+RPN+ + +K R Q+ GH Y +S
Sbjct: 184 EIAERLDLQEARHFVSSFDRPNIRYTVVQKDNARKQLTDFLRGHRGEAGIVYCMSRRKVE 243
Query: 619 ----LECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
CG A YH + P RA Q+++ +++ ++CAT+AFGMGI+KPDVRFV H
Sbjct: 244 ETAEFLCGQGFNALPYHAGLPPEVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRFVAH 303
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKS+EGY+QE GRAGRDG+ + L Y D + +K MI Q A G R
Sbjct: 304 TDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEA-------GEERKQ 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L ++ YCE+ + CRR + L FGE + C CDNC +
Sbjct: 357 LERG---------KLDHLLGYCES-MQCRRQVLLAGFGETYPQP-C-GNCDNC--LTPPA 402
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K + V TGQ+F H+++V RGS N+ VK+ H+ LS + G+ L
Sbjct: 403 SWDATIPAQKALSCVYRTGQRFGVGHLIDVLRGSENEKVKQQGHDKLSTYAIGRDLDARS 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ R LV L EV S+ +G L++ + + +++ GR+ + +R A +++
Sbjct: 463 WRSVFRQLVAASLL--EV-DSEGHGG----LRLTDA-SRDVLTGRRQISMRRDPASSTSG 514
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ S R PQ+ L+++LR LR L +E + V
Sbjct: 515 RER---------------SAQRTGLSVLPQD-------LALFNALRGLRAELARE--QNV 550
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
A+ IF ++TL++++++ P + +EL + GIG K+S+YG RL+E +
Sbjct: 551 PAFVIFHDSTLRNIAEQRPTSLDELARVGGIGGTKLSRYGPRLVEIV 597
>gi|261823379|ref|YP_003261485.1| ATP-dependent DNA helicase RecQ [Pectobacterium wasabiae WPP163]
gi|261607392|gb|ACX89878.1| ATP-dependent DNA helicase RecQ [Pectobacterium wasabiae WPP163]
gi|385873847|gb|AFI92367.1| ATP-dependent DNA helicase RecQ [Pectobacterium sp. SCC3193]
Length = 608
Score = 353 bits (906), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 223/655 (34%), Positives = 344/655 (52%), Gaps = 86/655 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EII+AT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q E++ + + KLLY+ PE++ +D L
Sbjct: 78 MKDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTG--QIKLLYIAPERLT-TDSFLDH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L A ++ I +DEAHC+SQWGHDFRP+Y+ LG +KQ+FP+ P +ALTATA + +
Sbjct: 135 L----AHWQISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + +I SF+RPN LWM + +R + G+ Y +
Sbjct: 191 DIVRLLDLQSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQ--GQRGKSGIIYCNSRSR 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDISARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 309 VHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA--HCKKTCDNCSKI 788
+G L+ L M ++ E CRRL+ L +FGE A +C D +
Sbjct: 357 -----AGPQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQEACGNCDICLDPPKRY 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+E A+K + V GQ+F +I+EV RG+ NQ ++ H+ L ++G GK
Sbjct: 411 DGLVE------AQKALSCVYRVGQRFGLGYIVEVLRGANNQRIRDFGHDKLPVYGIGKDK 464
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
++ +LR L+ L + + ++ S +++ +S A ++ G + L P I
Sbjct: 465 SQEHWVSVLRQLIHLGLLNQNI-------TMHSAVQLTES-ARPVLRGEMPLQLAVPRVI 516
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
N L P N Q N KL++ LR LR + E
Sbjct: 517 N--------------------LKPRAN------QKSYGGNYDRKLFAKLRKLRKSIADE- 549
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ + Y +F +ATL +++ +P T ELL ING+G K+ ++G + I +
Sbjct: 550 -DNIPPYVVFSDATLLEMAEMMPITAGELLNINGVGHRKLERFGAPFMNMIRDHV 603
>gi|120597203|ref|YP_961777.1| ATP-dependent DNA helicase RecQ [Shewanella sp. W3-18-1]
gi|146291576|ref|YP_001182000.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens CN-32]
gi|120557296|gb|ABM23223.1| ATP-dependent DNA helicase RecQ [Shewanella sp. W3-18-1]
gi|145563266|gb|ABP74201.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens CN-32]
Length = 607
Score = 353 bits (905), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 224/667 (33%), Positives = 349/667 (52%), Gaps = 89/667 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I G D V+MPTGGGKSL YQLPAL+
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERICGGQDCLVIMPTGGGKSLCYQLPALMMN 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ ++ + E+LR+L + + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLR--HGELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R ++SL LA IDEAHC+SQWGHDFRP+Y LG LKQ FP P++
Sbjct: 124 ERLLTADFIER-MQSLQ----LAMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPYVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++ + + LG ++ SF+RPN+ VAE+L HF L +
Sbjct: 179 ALTATADQATRQSICERLG-IDPYRLLSSFDRPNIRY---TVAEKLNAANQLRHFLLQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + R VQ + KD+I+I+ ATVA
Sbjct: 235 GSSGIIYCSSRRRVDEVADRLCLQGFNAKAYHAGMTQEDRGAVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIYRLGQRFGINHLIEVLRGSKGAPIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ L+ G GK + ++R L+ ++V + S + +N S A ++ G
Sbjct: 452 DKLTTWGIGKDKSHEYWLSVIRQLIHLGLASQDVTR-------GSSITLNPS-ARPVLKG 503
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSS 956
++L P +T K+ Q++ LN KL++
Sbjct: 504 EVALMLAEPRIQLTTTKRKAS------------------------QSKAPLNYDRKLFAR 539
Query: 957 LRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
L++LR + ++ + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G L
Sbjct: 540 LKLLRRTIAEQ--QDVPPYLVFNDATLAEMAAMMPTSAGEMLAVNGVGERKLSRFGDDFL 597
Query: 1017 ETIESTI 1023
+ I + +
Sbjct: 598 DEIAAYL 604
>gi|253690325|ref|YP_003019515.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756903|gb|ACT14979.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 608
Score = 353 bits (905), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 223/655 (34%), Positives = 344/655 (52%), Gaps = 86/655 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EII+AT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q E++ + + KLLY+ PE++ +D L
Sbjct: 78 MKDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTG--QIKLLYIAPERLT-TDSFLDH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L A +A I +DEAHC+SQWGHDFRP+Y+ LG +KQ+FP+ P +ALTATA + +
Sbjct: 135 L----AHWQIALIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + +I SF+RPN LWM + +R + G+ Y +
Sbjct: 191 DIVRLLDLQSPLIQINSFDRPNIRYTLVEKFKPLDQLWMFVQ--GQRGKSGIIYCNSRSR 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDICARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 309 VHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE--KFDSAHCKKTCDNCSKI 788
+G L+ L M ++ E CRRL+ L +FGE + +C D +
Sbjct: 357 -----AGPQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQQPCGNCDVCLDPPKRY 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+E A+K + V GQ+F +I+EV RG+ NQ ++ H+ L ++G GK
Sbjct: 411 DGLVE------AQKALSCVYRVGQRFGLGYIVEVLRGANNQRIRDFGHDKLPVYGIGKDK 464
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
++ +LR L+ L + + ++ S +++ +S A ++ G + L P I
Sbjct: 465 SQEHWVSVLRQLIHLGLLNQNI-------TMHSAVQLTES-ARPVLRGEVPLQLAVPRVI 516
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
N L P N Q N KL++ LR LR + E
Sbjct: 517 N--------------------LKPRAN------QKSYGGNYDRKLFAKLRKLRKSIADE- 549
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ + Y +F +ATL +++ +P T ELL ING+G K+ ++G + I +
Sbjct: 550 -DNIPPYVVFSDATLLEMAELMPITAGELLNINGVGHRKLERFGAPFMNMIRDHV 603
>gi|222053514|ref|YP_002535876.1| ATP-dependent DNA helicase RecQ [Geobacter daltonii FRC-32]
gi|221562803|gb|ACM18775.1| ATP-dependent DNA helicase RecQ [Geobacter daltonii FRC-32]
Length = 605
Score = 353 bits (905), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 232/677 (34%), Positives = 353/677 (52%), Gaps = 94/677 (13%)
Query: 381 LEANNK----KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
+EAN + KVFG SFR Q+EI+ + G D FV+MPTGGGKSL YQ+PAL PG+
Sbjct: 1 MEANPQQTLLKVFGYKSFRQPQQEIVEGLIRGEDAFVIMPTGGGKSLCYQIPALHRPGVA 60
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A F + ++ + +++L +++ D LLYV PE++
Sbjct: 61 IVVSPLISLMKDQVDALQANGVKAAFYNSSLSEAKARQVLAQMHDD--ALDLLYVAPERL 118
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
S+ L +LE + +A IDEAHCVSQWGHDFRP+Y LG L+Q FP P++ALT
Sbjct: 119 -MSEPFLERLEDVK----VALFAIDEAHCVSQWGHDFRPEYVQLGRLRQLFPQVPLIALT 173
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPN---LWMDCEKVAERLQVGLSY------GH 607
ATA + D+++ LGL + F+RPN L + K ++L+ LS G
Sbjct: 174 ATADPQTRNDIIERLGLGTAACYVAGFDRPNIRYLVTEKHKPFDQLRSFLSSRQPGEPGI 233
Query: 608 FFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
+ L +E ++ G AA YH + +R+ VQ+ + +DE+ ++ ATVAFGMGI
Sbjct: 234 VYALSRKRVEEVAARLVQSGVAAAPYHAGLPERERSRVQEAFQRDELQVVVATVAFGMGI 293
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGV-AEQ 721
+K ++RFV+H+ LPK+IE Y+QE GRAGRDG + +L + Y D + +I G AEQ
Sbjct: 294 DKSNIRFVVHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIAVARGLIENGTNAEQ 353
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
L MV + E V CRR + L +FG + H
Sbjct: 354 K------------------RIELHKLNAMVGFAEA-VTCRRRVLLGYFGAALN--HDCGN 392
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CD C I D T A+K + V GQ+F H+++V RG+ NQ ++ H+ LS
Sbjct: 393 CDVC--IDPPQRYDATVEAQKALSCVFRVGQRFGMGHVIDVLRGAGNQRIQSLGHDRLST 450
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+G GK ++ I+R LV +L +++ + SVLK+ + A L+ G + +V
Sbjct: 451 YGIGKDISVDMWGSIIRQLVHLGYLEQDL-------ASYSVLKLTPA-ARVLLRGEERLV 502
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPS---QPQNEVDLNLSAKLYSSLR 958
L P R+ T S P+N+ ++ L+ +LR
Sbjct: 503 LARP----------------------------RHKTASAQKAPRNKGEVPCDDALFQTLR 534
Query: 959 MLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLET 1018
LR L EA GV + +F +ATL ++ P E LL ++G+G K+ +YG E
Sbjct: 535 ALRKRLADEA--GVPPFVVFSDATLTEMAAMRPVDAEGLLSVSGVGIHKLGRYG----EE 588
Query: 1019 IESTIKEFYKTDKNGSS 1035
+ ++E+ + S+
Sbjct: 589 FLTVLREYTANNAPAST 605
>gi|443324439|ref|ZP_21053192.1| ATP-dependent DNA helicase RecQ [Xenococcus sp. PCC 7305]
gi|442795958|gb|ELS05292.1| ATP-dependent DNA helicase RecQ [Xenococcus sp. PCC 7305]
Length = 709
Score = 353 bits (905), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 228/660 (34%), Positives = 354/660 (53%), Gaps = 89/660 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE+ K FG SFR QR+II ++ D+ V+MPTGGGKSL +QLPAL+ G+T+V+S
Sbjct: 5 LESALKHFFGYDSFRAGQRKIIEEALNNQDLLVIMPTGGGKSLCFQLPALLKEGLTIVVS 64
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTE----QQEILRELNSDYCKYKLLYVTPEKV 496
PL++L++DQ+ L I ATFL+ +++ E Q+ IL K KLLYV PE++
Sbjct: 65 PLIALMKDQVDALQDNGIGATFLNSTLDYAEGRSRQEAILA------GKIKLLYVAPERL 118
Query: 497 AKS---DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
LLR L L I IDEAHCVS+WGHDFRP+Y+ L L+ +FP TP+
Sbjct: 119 LTEKFRSFLLRVANGLG----LNAIAIDEAHCVSEWGHDFRPEYRQLKQLRSQFPQTPIF 174
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE----------RLQVGL 603
A TATAT V++D++Q LGL + + SFNRPNL + + + R Q G
Sbjct: 175 AFTATATKRVQDDIIQQLGLRDANVHLASFNRPNLHYEVKSKDKNSYYQLLKDIRRQSGS 234
Query: 604 SYGHFFLLKEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGM 660
+ + ++L+ H A YH ++ R+ Q ++ +D+ +I ATVAFGM
Sbjct: 235 GIVYCLSRRRVEEIALKLKHDGIDALPYHAGLEAEVRSHNQTRFLRDDARVIVATVAFGM 294
Query: 661 GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAE 720
GINKPDVRFV H LP+S+E ++QE GRAGRDG+ + L++S+ D +V ++I Q
Sbjct: 295 GINKPDVRFVFHFDLPRSLESFYQESGRAGRDGETAKSTLFFSFGDIKKVDYLIEQ---- 350
Query: 721 QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKK 780
P N +A + L +++ Y E V CRR + L +FGE+F C +
Sbjct: 351 ----KPDPNEQRIAR---------QQLNQVIDYAEGTV-CRRTIILRYFGERF-GGDCGR 395
Query: 781 TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
CDNC + K +D T A+K + + ++F +H+++V RGS N+ V+++ H +S
Sbjct: 396 -CDNCLEPKPI--EDWTIEAQKFLSCMVRCRERFGMNHLIDVLRGSRNKKVQQYGHHLVS 452
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
+G GK + E ++R L+ + + E +D Y +L++N++ I+ +Q
Sbjct: 453 TYGIGKEKSIDEWKMLVRSLLHQGLISE---TNDGY----RILRLNKNSWE--ILKKQRS 503
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
V A+ KL K + +P Q + E+ LY LR+L
Sbjct: 504 V---QIAVTQKKLGKGET----------------KYSPRQAEAEI-------LYEKLRVL 537
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + + V Y IF +++L+ +S+ P+ ++E I+G+ K+ +YG + L I+
Sbjct: 538 RKNIADL--QAVPPYVIFADSSLKLMSQLQPKNDKEFSRISGVNNHKLQQYGDKFLSIIQ 595
>gi|323499630|ref|ZP_08104598.1| ATP-dependent DNA helicase RecQ [Vibrio sinaloensis DSM 21326]
gi|323315231|gb|EGA68274.1| ATP-dependent DNA helicase RecQ [Vibrio sinaloensis DSM 21326]
Length = 611
Score = 353 bits (905), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 224/653 (34%), Positives = 346/653 (52%), Gaps = 87/653 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q+E+I + + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 21 QEVFGYQEFRDGQQEVIESAVRGQDSLVIMPTGGGKSLCYQIPALVRNGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ M E + +NS KL+YV+PE+V D + R
Sbjct: 81 MKDQVDQLKANGVAAECVNSTMPRDELISVYNRMNSG--AIKLIYVSPERVLMRDFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ FP+ PV+ALTATA + ++
Sbjct: 138 LEQLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPVMALTATADDATRK 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++Q L L + + SF+RPN+ + EK +R Q G+ Y E
Sbjct: 194 DIMQRLQLQDPHSYLGSFDRPNIRYTLIEKHKPISQVVRFLEGQRGQCGIIYCGSRKKVE 253
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
L C G +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+
Sbjct: 254 MVTEKL-CNNGLRAASYHAGLDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVV 312
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H +P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 313 HFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE--------------- 357
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI--- 788
+ G + L M ++ E CRR + L +FGE + ++ C NC
Sbjct: 358 --KDEGPQKQVEAHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREQPCGNCDICLDP 409
Query: 789 -KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K F D T+ A+K + V Q F +++EV RG N V+++ H+ LS +G G+
Sbjct: 410 PKHF---DATEQAQKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKLSTYGIGRE 466
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ + R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 467 NSHDYWVSVFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGEMTLELAVPRL 518
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ + +KSD +K N KL++ LR LR + E
Sbjct: 519 DTAARAAKSDKLSSK-------------------------NYDKKLFAKLRKLRKAIADE 553
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 --DGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|160873520|ref|YP_001552836.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS195]
gi|378706760|ref|YP_005271654.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS678]
gi|418025211|ref|ZP_12664191.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS625]
gi|160859042|gb|ABX47576.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS195]
gi|315265749|gb|ADT92602.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS678]
gi|353535624|gb|EHC05186.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS625]
Length = 607
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 225/668 (33%), Positives = 350/668 (52%), Gaps = 91/668 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I G D V+MPTGGGKSL YQLPAL+
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMD 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ ++ + E+LR+L + + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLR--HGELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R ++SL LA IDEAHC+SQWGHDFRP+Y LG LKQ FP P++
Sbjct: 124 ERLLSADFIER-MQSLQ----LAMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPYVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++ + + LG ++ SF+RPN+ VAE+L HF +
Sbjct: 179 ALTATADQATRQSICERLG-IDPFRLLSSFDRPNIRY---TVAEKLNAANQLRHFLTQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + R VQ + KD+I+I+ ATVA
Sbjct: 235 GTNGIIYCSSRRRVDEVADRLCLQGFNAKAYHAGMTQEDRGAVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIFRLGQRFGINHLIEVLRGSKGAPIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ L+ G GK + ++R L+ ++V + S + +N S A ++ G
Sbjct: 452 DKLTTWGIGKDKSHEYWLSVIRQLIHLGLASQDVTR-------GSSITLNPS-ARPVLKG 503
Query: 897 RQNVVLRFPSA-INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYS 955
++L P + +TK S Q++ LN KL++
Sbjct: 504 EVALMLAEPRIQLTTTKRKVS-------------------------QSKAPLNYDRKLFA 538
Query: 956 SLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRL 1015
L++LR + ++ + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G
Sbjct: 539 RLKLLRRTIAEQ--QDVPPYLVFNDATLAEMAAMMPTSAGEMLAVNGVGERKLSRFGDAF 596
Query: 1016 LETIESTI 1023
L+ IE+ +
Sbjct: 597 LDEIEAYL 604
>gi|424669859|ref|ZP_18106884.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia
Ab55555]
gi|401071930|gb|EJP80441.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia
Ab55555]
gi|456734355|gb|EMF59171.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia EPM1]
Length = 601
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 228/647 (35%), Positives = 346/647 (53%), Gaps = 73/647 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q++I+ +GHD VLMPTGGGKSL YQ+PAL+ G +VISPL++L
Sbjct: 11 QRVFGYDDFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQVPALLRDGCGIVISPLIAL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ + REL + + +LYV PE++ L
Sbjct: 71 MQDQVEALRQLGVRAEYLNSTLDAETAGRVERELLAG--ELDMLYVAPERLLTGRFL--- 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL +R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P P +ALTATA +
Sbjct: 126 --SLLSRSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQIPRIALTATADPPTQR 183
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-GLSYGHFFLLKEFYVVS----- 618
++ + L L F SF+RPN+ + +K R Q+ GH Y +S
Sbjct: 184 EIAERLDLQEARHFVSSFDRPNIRYTVVQKDNARKQLTDFLRGHRGEAGIVYCMSRRKVE 243
Query: 619 ----LECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
CG A YH + P RA Q+++ +++ ++CAT+AFGMGI+KPDVRFV H
Sbjct: 244 ETAEFLCGQGFNALPYHAGLPPEVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRFVAH 303
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKS+EGY+QE GRAGRDG+ + L Y D + +K MI Q A G R
Sbjct: 304 TDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEA-------GEERKQ 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L ++ YCE+ + CRR + L FGE + C CDNC +
Sbjct: 357 LERG---------KLDHLLGYCES-MQCRRQVLLAGFGETYPQP-C-GNCDNC--LTPPA 402
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K + V TGQ+F H+++V RGS N+ VK+ H+ LS + G+ L
Sbjct: 403 SWDATIPAQKALSCVYRTGQRFGVGHLIDVLRGSENEKVKQQGHDKLSTYAIGRDLDART 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ R LV L EV S+ +G L++ + + +++ GR+ + +R A +++
Sbjct: 463 WRSVFRQLVAASLL--EV-DSEGHGG----LRLTDA-SRDVLTGRRQISMRRDPASSTSG 514
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ S R PQ+ L+++LR LR L +E + V
Sbjct: 515 RER---------------SAQRTGLSVLPQD-------LALFNALRGLRAELARE--QNV 550
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
A+ IF ++TL++++++ P + +EL + GIG K+S+YG RL+E +
Sbjct: 551 PAFVIFHDSTLRNIAEQRPTSLDELARVGGIGGTKLSRYGPRLVEIV 597
>gi|308188864|ref|YP_003932995.1| ATP-dependent DNA helicase RecQ [Pantoea vagans C9-1]
gi|308059374|gb|ADO11546.1| ATP-dependent DNA helicase RecQ [Pantoea vagans C9-1]
Length = 609
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 220/651 (33%), Positives = 346/651 (53%), Gaps = 78/651 (11%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG FRP Q+ IIN +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL++D
Sbjct: 21 FGYQQFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ LL + A +L+ M +QQ ++ + + + KLLY+ PE++ + L ES
Sbjct: 81 QVDQLLANGVAAAYLNSTMTRDQQQTVMADCRTG--RVKLLYIAPERLMMDNFL----ES 134
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L A A + +DEAHC+SQWGHDFRP+Y LG ++Q+FP PV+ALTATA + + D+V
Sbjct: 135 L-AHWQPAMLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELPVMALTATADETTRNDIV 193
Query: 569 QALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEFYV 616
L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 194 NLLHMQDPLIQISSFDRPNIRYTLVEKFKPTDQLLRYVQDQRGKCGIIYCNSRAKVEDTA 253
Query: 617 VSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 675
L+ G YH ID QRA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H +
Sbjct: 254 ARLQSRGFSVGAYHAGIDSEQRARVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 313
Query: 676 PKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVAN 735
P++IE Y+QE GRAGRDG + ++ Y +D ++ + + V
Sbjct: 314 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKV----------------- 356
Query: 736 SGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEK- 794
G + + L M ++ E CRRL+ L +FGE ++ CDNC ++
Sbjct: 357 PGPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QQPCDNCDICLDPPKRY 410
Query: 795 DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEAS 854
D A+K + + GQ+F +I+EV RGS NQ +++ H+ L ++G GK +
Sbjct: 411 DGLVEAQKALSGIYRVGQRFGMGYIVEVLRGSNNQRIREQGHDKLPVYGLGKDQSHEHWV 470
Query: 855 RILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLS 914
+LR L+ + + + ++ S L++ ++ A ++ G ++L P I + S
Sbjct: 471 SVLRQLIHLGLVTQNI-------AMHSALQLTEA-ARPVLRGEVPLMLAVPRLITAKTKS 522
Query: 915 KSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMA 974
PAK G N KL++ LR LR + E E +
Sbjct: 523 SG---PAK---FHGG------------------NYDRKLFAKLRKLRKAIADE--ENIPP 556
Query: 975 YHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + +
Sbjct: 557 YVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLVMIKEHLDD 607
>gi|408822198|ref|ZP_11207088.1| ATP-dependent DNA helicase [Pseudomonas geniculata N1]
Length = 601
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 228/647 (35%), Positives = 346/647 (53%), Gaps = 73/647 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q++I+ +GHD VLMPTGGGKSL YQ+PAL+ G +VISPL++L
Sbjct: 11 QRVFGYDDFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQVPALLRDGCGIVISPLIAL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A FL+ ++ + REL + + +LYV PE++ L
Sbjct: 71 MQDQVEALRQLGVRAEFLNSTLDAETAGRVERELLAG--ELDMLYVAPERLLTGRFL--- 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL +R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P P +ALTATA +
Sbjct: 126 --SLLSRSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQIPRIALTATADPPTQR 183
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-GLSYGHFFLLKEFYVVS----- 618
++ + L L F SF+RPN+ + +K R Q+ GH Y +S
Sbjct: 184 EIAERLDLQEARHFVSSFDRPNIRYTVVQKDNARKQLTDFLRGHRGEAGIVYCMSRRKVE 243
Query: 619 ----LECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
CG A YH + P RA Q+++ +++ ++CAT+AFGMGI+KPDVRFV H
Sbjct: 244 ETAEFLCGQGFNALPYHAGLPPEVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRFVAH 303
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKS+EGY+QE GRAGRDG+ + L Y D + +K MI Q A G R
Sbjct: 304 TDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEA-------GEERKQ 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L ++ YCE+ + CRR + L FGE + C CDNC +
Sbjct: 357 LERG---------KLDHLLGYCES-MQCRRQVLLAGFGETYPQP-C-GNCDNC--LTPPA 402
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K + V +GQ+F H+++V RGS N+ VK+ H+ LS + G+ L
Sbjct: 403 SWDATIPAQKALSCVYRSGQRFGVGHLIDVLRGSENEKVKQQGHDKLSTYAIGRDLDART 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ R LV L EV S+ +G L++ + + +++ GR+ + +R A +++
Sbjct: 463 WRSVFRQLVAASLL--EV-DSEGHGG----LRLTDA-SRDVLTGRRQISMRRDPASSTSG 514
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ S R PQ+ L+++LR LR L +E + V
Sbjct: 515 RER---------------SAQRTGLSVLPQD-------LALFNALRGLRAELARE--QNV 550
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
A+ IF ++TL++++++ P + +EL + GIG K+S+YG RL+E +
Sbjct: 551 PAFVIFHDSTLRNIAEQRPTSLDELARVGGIGGTKLSRYGPRLVEIV 597
>gi|158338684|ref|YP_001519861.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
gi|158308925|gb|ABW30542.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
Length = 736
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 231/661 (34%), Positives = 365/661 (55%), Gaps = 72/661 (10%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
K LE K FG FR QR +I A + D+ V+MPTGGGKSL +QLP L+ PG+T+V
Sbjct: 13 KSLEEALKHYFGYDQFRVGQRPVIEAALQRQDLMVVMPTGGGKSLCFQLPGLLLPGLTVV 72
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
ISPL++L+QDQ+ L +IPATFL+ +++ ++ + E+ S K KLLYV PE++
Sbjct: 73 ISPLIALMQDQVTTLQVNDIPATFLNSSIDAATARQRISEIYSG--KIKLLYVAPERLL- 129
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
++ L L+ + A+ LA +DEAHCVS+WGHDFRP+Y+ L ++Q++ PV ALTAT
Sbjct: 130 NESFLNLLDQVQAQVGLAAFAVDEAHCVSEWGHDFRPEYRRLAEVRQRYTQVPVYALTAT 189
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL---------QVGLSYGHFF 609
AT V++D++Q L L + SFNRPNL+ + + ++ Q G G +
Sbjct: 190 ATERVRQDIIQQLQLRQPFVHVASFNRPNLYYEVRPKSRQVYADLYREIRQHGQDSGIVY 249
Query: 610 LLKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
L V + G A YH + + R Q+++ +D++ ++ ATVAFGMGI+K
Sbjct: 250 CLSRREVNEISARLQADGISALPYHAGMSDSARTLNQERFIRDDVQVMVATVAFGMGIDK 309
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
PDVRFVIH++LP++IEGY+QE GRAGRDG+ S C+L++S D ++ +I + A+
Sbjct: 310 PDVRFVIHYNLPRNIEGYYQESGRAGRDGEPSKCLLFFSTKDIHTIEWLIERK-ADPETG 368
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
P N +A + L +++ Y E+ V CRR +QL +FGE F + C CDN
Sbjct: 369 NPLENEQRIAR---------QQLRQVIDYAESTV-CRRTVQLGYFGETF-AGDCGG-CDN 416
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C K +D T A+KL+ V +++ S++++V RGS N+ V + RH+ LS +G
Sbjct: 417 CCHPKPV--EDWTIPAQKLLSCVARCQERYGMSYVIDVLRGSKNKKVLQRRHDQLSTYGI 474
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
GK + + R L+ + + E +D Y VLK+N+
Sbjct: 475 GKDKTVDQWRLLGRTLLHQGLVTE---TTDGY----PVLKLNE----------------- 510
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
LS + + + ++P++ D P+ + E + L+ LR LR L
Sbjct: 511 --------LSWEVLRHQRSVFVPVPVAPTQ-DRPNARREEAE-----ALFQQLRELRKEL 556
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
+ + V Y IF +++L+ ++++ P+T E +I+G+GK K+ +YG + I + +
Sbjct: 557 ADQ--QSVPPYVIFADSSLKLMAQQQPQTMVEFAKISGVGKRKLEQYGQQFTAAIRTHRQ 614
Query: 1025 E 1025
E
Sbjct: 615 E 615
>gi|428302021|ref|YP_007140327.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
gi|428238565|gb|AFZ04355.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
Length = 724
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 359/662 (54%), Gaps = 84/662 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG +FR QREII + D+ V+MPTGGGKSL +QLPAL+ G+T+V+S
Sbjct: 7 LETTLKYYFGYDNFRLGQREIIEEALQNKDLMVVMPTGGGKSLCFQLPALMKKGVTIVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNME----WTEQQEILRELNSDYCKYKLLYVTPEKV 496
PL++L+QDQ+ L + I ATFL+ ++ + +Q IL K KL+YV PE++
Sbjct: 67 PLIALMQDQVETLRKNGIAATFLNSSLNSYQVRSREQAILE------GKVKLVYVAPERL 120
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
S+ L L+ +N + +A IDEAHCVS+WGHDFRP+Y+ L L+Q++ P+ ALT
Sbjct: 121 V-SERFLPFLDLVNHQVGIAGFAIDEAHCVSEWGHDFRPEYRQLITLRQRYSGIPLFALT 179
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE--------KVAERLQVGLSYGHF 608
ATAT V+ D+++ LGL I SFNR NL+ + +V E ++ +
Sbjct: 180 ATATDRVRADIIEQLGLQEPSIHIASFNRQNLYYEVRPKTKTVYAEVLELIRESEASTII 239
Query: 609 FLL--KEFYVVSLECGH---KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
+ L K+ ++ + H A YH + +R Q ++ +D++ ++ ATVAFGMGI+
Sbjct: 240 YCLTRKQVDELTFKLQHDKISALAYHAGLSDEERTNNQTRFIRDDVRVMVATVAFGMGID 299
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVR VIH++LP++IEGY+QE GRAGRDG+ S C +++ D ++ I+Q Q
Sbjct: 300 KPDVRLVIHYNLPRNIEGYYQESGRAGRDGEPSRCTMFFGVGDIKTIEWSINQKTDSQEQ 359
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+ L +++ + E DCRR +QL +FGE+F +C CD
Sbjct: 360 LIA-----------------KQQLRQVIDFAEG-TDCRRTIQLGYFGERF-LGNC-GNCD 399
Query: 784 NCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHG 843
NC K +D T A K + V ++F HI++V RG + +K ++H+TLS +G
Sbjct: 400 NCRYPKPV--QDWTVEAMKFLSCVARCKEKFGMGHIIDVLRGGKTEKIKLYKHDTLSTYG 457
Query: 844 AGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
GK + E R+L ++ L+E+ SD YG VLK+N S + ++ ++NV +
Sbjct: 458 IGKDKSLDEW-RMLGRSLLHQGLVEQ--SSDGYG----VLKLN-SLSWEVMRRQRNVSV- 508
Query: 904 FPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
L+ R + + Q V + L LR LR
Sbjct: 509 ------------------------AVLTVQRENVKEKSQKAVAAEM---LLQRLRGLRKS 541
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
L E + + Y IF +++L+ +S+ +PRT+ + +++G+GK K+++YG R + I++
Sbjct: 542 LADE--QKIAPYAIFADSSLKLMSQSLPRTKADFAKLSGVGKHKLTEYGDRFVAEIQAFC 599
Query: 1024 KE 1025
+E
Sbjct: 600 RE 601
>gi|354566185|ref|ZP_08985358.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
gi|353546693|gb|EHC16141.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
Length = 719
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 226/659 (34%), Positives = 357/659 (54%), Gaps = 76/659 (11%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
+LE K FG +FRP QREI+ +S D+ ++MPTGGGKSL +QLPALI G+T+V+
Sbjct: 6 QLEKALKYHFGYDNFRPGQREIVEDALSNRDLLIIMPTGGGKSLCFQLPALIKKGLTVVV 65
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL++L+QDQ+ L + + ATFL+ ++ + + RE K KLLYV PE++ S
Sbjct: 66 SPLIALMQDQVEALRKNGVAATFLNSSLNSYQTRS--REQYILQGKVKLLYVAPERLV-S 122
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
D L L+ ++ + ++ IDEAHCVS+WGHDFRP+Y+ L +L++++ + P A TATA
Sbjct: 123 DRFLPFLDLIHHQVGISAFAIDEAHCVSEWGHDFRPEYRQLILLRKRYADVPTWAFTATA 182
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-----KVAERLQV-----GLSYGHFF 609
T V+ D++Q LGL N I SFNR NL+ + AE L++ G +
Sbjct: 183 TDRVRNDIIQQLGLQNPSIHIASFNRQNLYYEVRPKKKNAYAELLELIRDSEGSGIIYCL 242
Query: 610 LLKEFYVVSLECGH---KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
K+ ++ + H A YH + +R Q ++ +D++ ++ AT+AFGMGINKPD
Sbjct: 243 TRKKVDEITFKLQHDQVSALPYHAGLTDEERTQNQTRFIRDDVRVMVATIAFGMGINKPD 302
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH +P+++E Y+QE GRAGRDG+ S C L++SY+D ++ +I+Q Q
Sbjct: 303 VRFVIHFDIPRNLESYYQESGRAGRDGEASRCTLFFSYADVKIIEFLINQKSEPQEQLIA 362
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ L +M+ Y E DCRR +QL +FGE+F +C CDNC
Sbjct: 363 -----------------KQQLRQMIDYAEG-TDCRRTIQLSYFGERF-LGNC-DNCDNCR 402
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
K +D T A K + V ++F HI++V RG+ Q + ++ H+ LS +G GK
Sbjct: 403 YPKPV--QDWTVEAMKFLSCVARCKEKFGMGHIIDVLRGAKTQKIAQYEHDKLSTYGIGK 460
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
E R+L ++ L+E+ +D Y +VLK+N A + + R+ + P
Sbjct: 461 D-KSVEEWRMLGRSLLHQGLIEQ--STDGY----AVLKLN---ALSWEVMRRQRTVSIPV 510
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
+ + KL+ + D + E+ L LR LR L
Sbjct: 511 TV-TQKLT------------------WKEDNAKTVEAEM-------LLQRLRSLRKQLAD 544
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
E + V Y IF ++TL+ +++ P+T++ ++G+G K+++YG + + I + +E
Sbjct: 545 E--QSVPPYVIFADSTLKLMAQVKPQTKDAFSRLSGVGSHKLNQYGDKFIAEIRAYCQE 601
>gi|421079860|ref|ZP_15540796.1| ATP-dependent helicase RecQ [Pectobacterium wasabiae CFBP 3304]
gi|401705347|gb|EJS95534.1| ATP-dependent helicase RecQ [Pectobacterium wasabiae CFBP 3304]
Length = 608
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 223/655 (34%), Positives = 344/655 (52%), Gaps = 86/655 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EII+AT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q E++ + + KLLY+ PE++ +D L
Sbjct: 78 MKDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTG--QIKLLYIAPERLT-TDSFLDH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L A ++ I +DEAHC+SQWGHDFRP+Y+ LG +KQ+FP+ P +ALTATA + +
Sbjct: 135 L----AHWQISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + +I SF+RPN LWM + +R + G+ Y +
Sbjct: 191 DIVRLLDLHSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQ--GQRGKSGIIYCNSRSR 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDISARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 309 VHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA--HCKKTCDNCSKI 788
+G L+ L M ++ E CRRL+ L +FGE A +C D +
Sbjct: 357 -----AGPQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQEACGNCDVCLDPPKRY 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+E A+K + V GQ+F +I+EV RG+ NQ ++ H+ L ++G GK
Sbjct: 411 DGLVE------AQKALSCVYRVGQRFGLGYIVEVLRGANNQRIRDFGHDKLPVYGIGKDK 464
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
++ +LR L+ L + + ++ S +++ +S A ++ G + L P I
Sbjct: 465 SQEHWVSVLRQLIHLGLLNQNI-------TMHSAVQLTES-ARPVLRGEMPLQLAVPRVI 516
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
N L P N Q N KL++ LR LR + E
Sbjct: 517 N--------------------LKPRAN------QKSYGGNYDRKLFAKLRKLRKSIADE- 549
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ + Y +F +ATL +++ +P T ELL ING+G K+ ++G + I +
Sbjct: 550 -DNIPPYVVFSDATLLEMAELMPITAGELLNINGVGHRKLERFGAPFMNMIRDHV 603
>gi|219853011|ref|YP_002467443.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
gi|219547270|gb|ACL17720.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
Length = 606
Score = 352 bits (904), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 341/656 (51%), Gaps = 75/656 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ +G SF P+Q+EII + + G D +M TGGGKSL YQLPAL G+T+V+SPL+SL
Sbjct: 9 KRYWGYSSFLPHQKEIIGSVLKGQDTLAIMATGGGKSLCYQLPALCLGGLTVVVSPLISL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + I A + +ME+ + +I +L + K +LL+V+PE+ ++ L
Sbjct: 69 MKDQVDDLNERGILAVAFNSSMEYRVRTKIEADLKNG--KIRLLFVSPERCMQAGFL--- 123
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + I +DEAHC+S+WGH+FRP+Y+ L LK+ FP P++ALTATA V+
Sbjct: 124 --DLIKAAPIRLIAVDEAHCISEWGHNFRPEYRQLAQLKKLFPAVPLVALTATAIPEVRR 181
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAER------LQVGLSY-----GHFFLL--K 612
D+ Q LG+ + F SFNR NL +V E+ L LS G + + K
Sbjct: 182 DICQQLGISDAHEFVGSFNRKNLMY---RVVEKKNPKILLLTFLSRHQHESGIIYCMSKK 238
Query: 613 EFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
E V+ + G+ A YH + R VQ + K+ I I+CAT+AFGMGI+KPDVRF
Sbjct: 239 ETEEVARDLRRRGYNAQAYHAGLSKQVRTKVQDGFIKNTITIVCATIAFGMGIDKPDVRF 298
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH+ +PK++E Y+QE GRAGRDG+ S CVL+YS D RV+ M+ H+
Sbjct: 299 VIHYDIPKTVESYYQETGRAGRDGRPSECVLFYSRGDIARVRSMLE------------HD 346
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
N L + L M YCE + CRR L +FGE+ HC +CDNC+
Sbjct: 347 HMTERN----LRASLRKLQEMTEYCEA-ITCRRRFLLSYFGEESPDEHC-TSCDNCNHPA 400
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D T+ A+ +VE VK F I ++ RGS ++ + + L+ +G GK +
Sbjct: 401 A--RNDGTEPARLIVECVKELSSNFGIDLITDLLRGSTCARIRDYHLDALAAYGTGKQYS 458
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K++ + LV + +L + V G K +L+ G+ V+L +
Sbjct: 459 KAQYRTWINELVRQGYLARTGDRYLVIGMT--------DKGEDLLRGKNRVMLPAQEKMK 510
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ PA +++ S DT L+ LR LR + ++
Sbjct: 511 TKTTKAPRARPAAEPVVT-----SARDT--------------DLFLQLRALRRSIAEQG- 550
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
G+ + +F + TL+ +++ P E L+I+G+G+ KV +YG +E I +E
Sbjct: 551 -GIPPFMVFPDKTLREMARIRPCDRESFLQISGVGEVKVKRYGPAFIEVIRGCSEE 605
>gi|386821390|ref|ZP_10108606.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386426496|gb|EIJ40326.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 699
Score = 352 bits (903), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 225/647 (34%), Positives = 348/647 (53%), Gaps = 84/647 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG SFRP QREII+ ++G+D V+MPTGGGKS+ YQLPAL+ G+T+VISPL++L
Sbjct: 12 KEYFGYDSFRPLQREIIDTILNGNDCLVIMPTGGGKSICYQLPALLQDGLTIVISPLIAL 71
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L IPA FL+ + EQ+ I ++ + K KLLYV PE L
Sbjct: 72 MKDQVDGLNVNGIPACFLNSSQSTAEQEVIFNDIEAK--KIKLLYVAPES-------LSY 122
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE++ + ++ I +DEAHC+S WGHDFRP Y LG LK +FPNTP++ALTATA + +E
Sbjct: 123 LENIFSSTKISLIAVDEAHCISSWGHDFRPAYTQLGFLKNRFPNTPLIALTATADKATRE 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D+ L + N F SF+R NL ++ +R++ + + G + L
Sbjct: 183 DIANQLNISNAKKFVASFDRKNLSLEVRPGTDRIKQIIQFLNKRPNESGIVYCLSRKTTE 242
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
S+ + G+ A YH ++ R+ VQ+ + D+ I+CATVAFGMGI+K +VR+VIH
Sbjct: 243 SIAEKLQQAGYNAEAYHAGVNHDGRSKVQEDFINDKTQIVCATVAFGMGIDKSNVRWVIH 302
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
++LPK+IEGY+QE GRAGRDG S +L++SY+D ++++ F G
Sbjct: 303 YNLPKNIEGYYQEIGRAGRDGLPSYTLLFHSYADVVQLQK-----------FAEG----- 346
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
NS E L RM Y + + CRR + L +FGE F C CD C F
Sbjct: 347 AGNS----EVQLAKLERMKQYADA-LSCRRKILLSYFGE-FIEKDC-GNCDVCKNPPQFF 399
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T TA+K + V + + +++V RGS NQ V ++ ++ L +G +A
Sbjct: 400 --DGTITAQKALSCVARLKENENIGLVIDVLRGSHNQQVLENGYQNLKTYG----IANDI 453
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ R +H +I+ M + ++ + LK+ +A ++ + V L P
Sbjct: 454 SWRDWQHYIIQ---MVNLGYLEIAFHQKNTLKLT-PQAKEVLFNNKKVALTKP------- 502
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ +L++ K + ++ + L+ LR LR + KE E +
Sbjct: 503 ---------QDTLVTEKAANTKQEKTKDT-----------LFERLRKLRLSISKE--EDI 540
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
AY IF +ATL+ + P T+E+ ++ING+G+ K+ YG + ++ I
Sbjct: 541 PAYLIFNDATLKEIEAERPLTDEDFMQINGVGRRKMENYGYQFIKEI 587
>gi|59710677|ref|YP_203453.1| ATP-dependent DNA helicase RecQ [Vibrio fischeri ES114]
gi|59478778|gb|AAW84565.1| ATP-dependent DNA helicase [Vibrio fischeri ES114]
Length = 611
Score = 352 bits (903), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 228/652 (34%), Positives = 350/652 (53%), Gaps = 85/652 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG FR Q E+INA + D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 21 KDVFGYQEFRVGQEEVINAVLDSKDCLVIMPTGGGKSLCYQIPALVFEGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +E EQ I +NS + K+LYV+PE+V D + R
Sbjct: 81 MKDQVDQLKANGVKAECLNSTIEREEQIAIWNRVNSG--QVKMLYVSPERVMMRDFMDR- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LESLN L I +DEAHC+SQWGHDFRP+Y LG +KQ+FP+ P++ALTATA + ++
Sbjct: 138 LESLN----LCMIAVDEAHCISQWGHDFRPEYASLGQIKQRFPSVPIMALTATADEATRK 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++ L L + SF+RPN+ + EK ++ Q G+ Y E
Sbjct: 194 DILHRLSLPEPHQYLGSFDRPNIRYTVLEKHKPVSQIVRYLATQKNQCGVIYCGSRKKVE 253
Query: 614 FYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L H +AA YH +D +R +VQ+ + +D+I I+ ATVAFGMGINK +VRFV H
Sbjct: 254 MLTEKLCNNHIRAASYHAGLDLDERNYVQEAFQRDDIQIVVATVAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+PK+IE Y+QE GRAGRDG + V+ Y +D + ++ ++ E+ P P
Sbjct: 314 FDIPKNIESYYQETGRAGRDGLPAEAVMLYDPADIVWLRKLV-----EEKPEGP------ 362
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+++E++ N M ++ E CRR + L +FGE + K C NC
Sbjct: 363 ----QKLVESHKLN--AMTAFAEAQT-CRRQVLLNYFGE-----YSAKPCGNCDVCLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG +++H H+ LS +G GK
Sbjct: 411 KQF---DGTEAAQKALSCVYRVNQSFGVGYVVEVLRGLKIARIREHGHDKLSTYGIGKEH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
I+R L+ + L++ + + +S L++ + +A ++ G++ + L P
Sbjct: 468 THEYWVSIIRQLIHKGLLVQNITR-------NSTLQLTE-EARPILKGQEPLELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ K +KS+ KL+ + N +L++ LR LR +
Sbjct: 520 IAAKTAKSE-----------KLN--------------NRNYDKQLFAKLRKLRKSIADR- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ + Y +F +ATL ++ +P + E+L +NG+G+ K+ KY L+ IE
Sbjct: 554 -DDLPPYVVFSDATLMDMADILPTSYGEMLAVNGVGQKKLEKYADPFLDLIE 604
>gi|374287671|ref|YP_005034756.1| ATP-dependent DNA helicase [Bacteriovorax marinus SJ]
gi|301166212|emb|CBW25787.1| ATP-dependent DNA helicase [Bacteriovorax marinus SJ]
Length = 605
Score = 352 bits (903), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 233/656 (35%), Positives = 351/656 (53%), Gaps = 86/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG+ SFR +Q +I+N+ + GHD +MPTGGGKS+ YQ+PAL GITLV+SPL+SL
Sbjct: 17 KDKFGHKSFRLSQHDIVNSILDGHDTMAIMPTGGGKSICYQVPALYLEGITLVVSPLISL 76
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+ DQ+ +L I A +L+ N ++QE + ++ S + KL+Y++PE + S
Sbjct: 77 MSDQVSNLAANGIHAVYLNSNQSPEQRQEAISDIRSK--RAKLVYISPEGIL-SGGNSSL 133
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LES++ ++ I IDEAHCVSQWGH+FRPDY LG+LK+ FP+TP++ALTATA +
Sbjct: 134 LESID----ISLIAIDEAHCVSQWGHEFRPDYTRLGLLKELFPSTPLMALTATADEKTRR 189
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGH------FFLLKEFYV 616
D+ L + I+ SF+R N+ ++ E ++L +S H + L V
Sbjct: 190 DIAYQLKMEEPNIYISSFDRSNIKYSILEREDEIKQLDEFISKNHAGDTGIVYCLSRKKV 249
Query: 617 VSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
S+ E GH + YH + +R FVQK ++ D+ II ATVAFGMGI++PDVRFV
Sbjct: 250 ESVSKKLKERGHHSFAYHAGLSANERDFVQKAFNNDDGIIIVATVAFGMGIDRPDVRFVA 309
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKS+E Y+QE GRAGRDGQ ++ + Y D I+ HM+ A + H +
Sbjct: 310 HLDLPKSVESYYQETGRAGRDGQAANAWMVYGLQDVIKHSHMLETTEASE------HYK- 362
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ E L M+S CE CRR L +F E+ CDNC
Sbjct: 363 ---------KVAREKLDSMLSICET-TKCRRNFLLQYFEEE-----SSPKCDNCD--SCL 405
Query: 792 IEKDVTDT---AKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
DV D A+KL+ + TGQ++ +++I++V RGS N V++ H LS++G GK
Sbjct: 406 HPGDVWDARVDAQKLLSTIFRTGQRYGANYIVDVLRGSKNSKVEERGHHNLSVYGIGKDE 465
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
KS + I+R L+ M+ + S+ +++K K+ L+ G + +L+
Sbjct: 466 TKSHWNLIVRQLLN----MKYIAISNWEYRTLTLMK----KSEALLKGEEEFLLK----- 512
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
K +T R P++ QN + L+++LR +R + E
Sbjct: 513 ------KRKITL-------------RKSAPTENQN----HQRDDLFNNLRKIRKSIANE- 548
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
G+ + IFG+ TL + +PR + E L +NG+G K +YG L+ I S I+
Sbjct: 549 -NGLAPFMIFGDKTLHDMCHLLPRDKSEFLMVNGVGTNKCERYGDDFLKEINSYIQ 603
>gi|209693836|ref|YP_002261764.1| ATP-dependent DNA helicase RecQ [Aliivibrio salmonicida LFI1238]
gi|208007787|emb|CAQ77909.1| ATP-dependent DNA helicase RecQ [Aliivibrio salmonicida LFI1238]
Length = 611
Score = 352 bits (902), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 228/655 (34%), Positives = 350/655 (53%), Gaps = 85/655 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FR Q E+INA + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 21 RDVFGYQEFRVGQEEVINAVLEGKDSLVIMPTGGGKSLCYQIPALVFEGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ ++ Q I +NS + K+LYV+PE+V D + R
Sbjct: 81 MKDQVDQLKADGVQAECLNSTIDRDAQVSIWNRVNSG--QIKMLYVSPERVMMRDFMDR- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L SLN L I +DEAHC+SQWGHDFRP+Y LG +KQ+FPN P++ALTATA + ++
Sbjct: 138 LASLN----LCMIAVDEAHCISQWGHDFRPEYASLGQIKQRFPNVPIMALTATADEATRK 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++ L L N + SF+RPN+ + EK ++ Q G+ Y E
Sbjct: 194 DILSRLSLPNPHEYLGSFDRPNIRYTVLEKHKPVSQIVRYLATQKNQCGVIYCGSRKKVE 253
Query: 614 FYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L H +AA YH +D +R +VQ+ + +D+I I+ ATVAFGMGINK +VRFV H
Sbjct: 254 MLTEKLCNNHIRAASYHAGLDLDERNYVQEAFQRDDIQIVVATVAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+PK+IE Y+QE GRAGRDG + V+ Y +D + ++ ++ E+ P P
Sbjct: 314 FDIPKNIESYYQETGRAGRDGLPAEAVMLYDPADIVWLRKLV-----EEKPEGP------ 362
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+++E++ N M ++ E CRR + L +FGE + K C NC
Sbjct: 363 ----QKLVESHKLN--AMTAFAEAQT-CRRQVLLNYFGE-----YNPKPCGNCDVCLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG +++H H+ LS +G GK
Sbjct: 411 KQF---DGTEAAQKALSCVYRVNQSFGVGYVVEVLRGLKIARIREHGHDKLSTYGIGKDN 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I+R L+ + L + + + +S L++ + +A ++ G++ + L P
Sbjct: 468 SHEYWVSIIRQLIHKGLLTQNITR-------NSTLQLTE-EARPILKGQEPLELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ K +KS+ KL+ + D +L++ LR LR +
Sbjct: 520 TAAKTAKSE-----------KLNNRQYDK--------------QLFAKLRKLRKSIADR- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ + Y +F +ATL ++ P + E+L +NG+G+ K+ KY L+ IE I
Sbjct: 554 -DDLPPYVVFSDATLMDMADITPTSYGEMLAVNGVGQKKLEKYADPFLDLIEMHI 607
>gi|167622376|ref|YP_001672670.1| ATP-dependent DNA helicase RecQ [Shewanella halifaxensis HAW-EB4]
gi|167352398|gb|ABZ75011.1| ATP-dependent DNA helicase RecQ [Shewanella halifaxensis HAW-EB4]
Length = 607
Score = 352 bits (902), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 220/663 (33%), Positives = 349/663 (52%), Gaps = 85/663 (12%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
+L + + VFG +FR QRE+I +G D V+MPTGGGKSL YQLPALI PG+T+V+
Sbjct: 12 QLSSTLQSVFGYRTFREGQREVIEQICAGQDCLVIMPTGGGKSLCYQLPALIMPGLTVVV 71
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL+SL++DQ+ L+Q + A +L+ ++ E ++L+++ Y + KLLYV+PE++ ++
Sbjct: 72 SPLISLMKDQVDSLIQTGVSAAYLNSSLPREESLQVLQKMR--YGELKLLYVSPERLLQA 129
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
+ R L LN ++ IDEAHC+SQWGHDFRP+Y LG L+Q+FP P++ALTATA
Sbjct: 130 SFIDR-LHELN----VSLFAIDEAHCISQWGHDFRPEYAALGRLRQQFPQVPIMALTATA 184
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSL 619
+ + D+ + L + + SF+RPN+ VAE+L F + +
Sbjct: 185 DKATRADICERLTITPHSLL-TSFDRPNIRY---TVAEKLNAANQLRQFVDAQNGTSGIV 240
Query: 620 EC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
C GH+A YH +RA VQ ++ KD+++I+ ATVAFGMGIN
Sbjct: 241 YCSSRRRVDEVAERLRLQGHQAEAYHAGKTQEERADVQDRFLKDQLDIVVATVAFGMGIN 300
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
K +VR+V+H+ +PKS+E Y+QE GRAGRDG S ++ + +D RV+H+I Q
Sbjct: 301 KSNVRYVVHYDIPKSVEAYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQS------ 354
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
PG + + L M ++ E CRR + L +F E K C
Sbjct: 355 -EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDEP-----ALKACG 397
Query: 784 NCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC +K + A+K++ + GQ+F +H++EV RGS + V + H+ LS
Sbjct: 398 NCDICLDPPKKYNGIQDAQKVLSCIYRIGQRFGINHLIEVLRGSKSASVIERGHDKLSTW 457
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK + ++R L+ +++ + S + +N S A ++ G ++L
Sbjct: 458 GIGKEKSHEHWLSVIRQLIHLGLANQDITR-------GSSVTLNPS-ARAVLKGEVELLL 509
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + T +S+ + A LN KL++ L++LR
Sbjct: 510 AEPRIVIQTTKRRSNNSRAP------------------------LNYDRKLFARLKLLRR 545
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
L +E V Y +F +ATL ++ +P + E+L +NG+G+ K+ ++G L+ I
Sbjct: 546 TLAEEL--DVPPYLVFNDATLAEMAAILPTSPGEMLAVNGVGERKLERFGGEFLDEIADY 603
Query: 1023 IKE 1025
+ E
Sbjct: 604 LAE 606
>gi|359458485|ref|ZP_09247048.1| ATP-dependent DNA helicase RecQ [Acaryochloris sp. CCMEE 5410]
Length = 739
Score = 352 bits (902), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 233/661 (35%), Positives = 362/661 (54%), Gaps = 71/661 (10%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
K LE K FG FR QR +I A + D+ V+MPTGGGKSL +QLP L+ PG+T+V
Sbjct: 13 KSLEEALKHYFGYDQFRVGQRPVIEAALQQQDLMVVMPTGGGKSLCFQLPGLLLPGLTVV 72
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
ISPL++L+QDQ+ L +IPATFL+ +++ ++ + E+ S K KLLYV PE++
Sbjct: 73 ISPLIALMQDQVTTLQVNDIPATFLNSSIDAATARQRISEIYSG--KIKLLYVAPERLLH 130
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
+ L L+ + A+ LA +DEAHCVS+WGHDFRP+Y+ L ++Q++ PV LTAT
Sbjct: 131 -ESFLNLLDQVQAQVGLAAFAVDEAHCVSEWGHDFRPEYRRLAEVRQRYAQVPVYTLTAT 189
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVA---------ERLQVGLSYGHFF 609
AT V++D++Q L L + SFNRPNL+ + + E Q G G +
Sbjct: 190 ATERVRQDIIQQLQLRQPFVHVASFNRPNLYYEVRPKSRQAYADLYREIRQHGQDSGIVY 249
Query: 610 LLKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
L V + G +A YH + + R Q+++ +D++ ++ ATVAFGMGI+K
Sbjct: 250 CLSRREVNEISARLQGDGIRALPYHAGMSDSARTLNQERFIRDDVQVMVATVAFGMGIDK 309
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
PDVRFVIH++LP++IEGY+QE GRAGRDG+ S C+L++S D ++ +I + V ++
Sbjct: 310 PDVRFVIHYNLPRNIEGYYQEAGRAGRDGEPSKCLLFFSTKDIHTLEWLIERKVDPETG- 368
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
P N +A + L +++ Y E+ V CRR +QL +FGE F C CDN
Sbjct: 369 NPLENEQRIAR---------QQLRQVIDYAESTV-CRRTVQLGYFGETF-GGDCGG-CDN 416
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C K +D T A+KL+ V +++ S++++V RGS NQ V + RH+ LS +G
Sbjct: 417 CCHPKPV--EDWTIPAQKLLSCVARCQERYGMSYVIDVLRGSRNQKVLQRRHDQLSTYGI 474
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
GK + + R L+ + + E +D Y VLK+N
Sbjct: 475 GKDKTVDQWRLLGRTLLHQGLVAE---TTDGY----PVLKLN------------------ 509
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
LS + + + ++P++ D PS + E + L+ LR LR L
Sbjct: 510 -------DLSWEVLRHQRSVFVPVPVAPTQ-DRPSNARREE----AEALFQRLRELRKEL 557
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
+ + V Y IF +++L+ ++++ P+T E +I+G+GK K+ +YG + I + +
Sbjct: 558 ADQ--QSVPPYVIFADSSLKLMAQQQPQTMVEFAKISGVGKRKLEQYGQQFTACIRTHRQ 615
Query: 1025 E 1025
E
Sbjct: 616 E 616
>gi|434406622|ref|YP_007149507.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
gi|428260877|gb|AFZ26827.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
Length = 723
Score = 352 bits (902), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 231/659 (35%), Positives = 358/659 (54%), Gaps = 76/659 (11%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
KLE K FG FRP QR+II + D+ ++MPTGGGKSL +QLPAL+ PG+T+V+
Sbjct: 6 KLEQALKYHFGYDQFRPGQRQIIEDALQNRDLLIIMPTGGGKSLCFQLPALLKPGLTVVV 65
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL++L+QDQ+ L NI ATFL+ ++ + + RE K KLLYV PE++ S
Sbjct: 66 SPLIALMQDQVEALRTNNISATFLNSSLNAFKVRS--REEALLQGKIKLLYVAPERLL-S 122
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
+ L L+ + + ++ IDEAHCVS+WGHDFRP+Y+ + L++++P+ P LALTATA
Sbjct: 123 ERFLPLLDLVKEKIGISTFAIDEAHCVSEWGHDFRPEYRQMKSLRKRYPDVPTLALTATA 182
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-----KVAERLQV-----GLSYGHFF 609
T V+ D++Q LGL I SFNR NL+ + AE L + G +
Sbjct: 183 TDRVRADIIQQLGLKQPSIHIASFNRQNLYYEVRTKTKTAYAELLGIIRENQGSGIIYCL 242
Query: 610 LLKEFYVVSLECGH---KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
K+ ++L+ H YH + +R+ Q ++ +D++ ++ AT+AFGMGINKPD
Sbjct: 243 TRKKVDELTLKLQHDKISVLSYHAGLTDDERSKNQTRFIRDDVRVMVATIAFGMGINKPD 302
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH+ LP+++E Y+QE GRAGRD + S C L++S+SD ++ I+Q Q
Sbjct: 303 VRFVIHYDLPRNLESYYQESGRAGRDDEPSRCTLFFSFSDIKTIEWSINQKTDPQEQL-- 360
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ + L +++ Y E DCRR +QL +FGE+F +C CDNC
Sbjct: 361 ---------------ISKQQLRQVIDYAEG-TDCRRTIQLGYFGERF-PGNC-GNCDNCL 402
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
K +D T A K + V ++F HI++V RG NQ + ++ H+ LS +G GK
Sbjct: 403 YPKPV--QDWTIEAMKFLSCVARCKERFGMLHIIDVLRGGKNQKITQNEHDLLSTYGIGK 460
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
E R+L ++ L+E+ +D Y SVLK+N + + ++ ++ V + P
Sbjct: 461 DKTLDEW-RMLGRSLLHQGLLEQT--ADGY----SVLKLN-ALSWEVMKRQRTVSIAVPV 512
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
A VT +GS + + + L LR LR L
Sbjct: 513 A--------QKVTWEEGSTKAAE--------------------AEVLVQRLRSLRKQLAD 544
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
E + V Y IF ++TL+ +S+ P+T + +++G+G K+++YG + L I++ +E
Sbjct: 545 E--QSVPPYVIFHDSTLKLMSQVQPQTLIDFGKLSGVGSHKLAQYGEKFLAEIKAYRRE 601
>gi|268570477|ref|XP_002640754.1| Hypothetical protein CBG24191 [Caenorhabditis briggsae]
gi|296439745|sp|A8WK63.1|RECQ1_CAEBR RecName: Full=Putative ATP-dependent DNA helicase Q1
Length = 618
Score = 352 bits (902), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/467 (41%), Positives = 259/467 (55%), Gaps = 41/467 (8%)
Query: 369 KWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLP 428
+W FPW+ + K F FRP Q INA MS D V++ TGGGKSL YQLP
Sbjct: 62 RWDQDSFPWSDEANQILKNKFRLEKFRPLQSAAINAVMSKEDAIVILSTGGGKSLCYQLP 121
Query: 429 ALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKL 488
AL+ G+TLVISPLVSL++DQIM L + I A L+ N E + + + + + +L
Sbjct: 122 ALLAKGLTLVISPLVSLVEDQIMQLQKLGIDAASLNANTPKDEAKRVEQAITKGSTELRL 181
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPEK+AKS ++ QLE L I IDE HC SQWGHDFR DY L +LK++F
Sbjct: 182 LYVTPEKLAKSKRMMNQLEKSLGVGYLKLIAIDEVHCCSQWGHDFRTDYSFLNVLKRQFK 241
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM----------DC-EKVAE 597
P+L LTATAT++V +DV + LG+ I+FR FNR NL +C EK+
Sbjct: 242 GVPILGLTATATSNVLDDVKKMLGIPVAIVFRAGFNRANLNYKVLTKPGSEDECVEKIVR 301
Query: 598 RLQVGLS--YGHFFLLK----EFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
++ S G + L E SL+ G +A YH ++P R+ ++W EI
Sbjct: 302 TIKRKFSGKTGIIYCLSRNDCEKLAKSLKANGIRAKHYHAYMEPVDRSAAHQKWVSGEIQ 361
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+I ATVAFGMGI+KPDVRFVIHHSLPKSIE Y+QE GRAGRDG ++C+LYY SD +
Sbjct: 362 VIVATVAFGMGIDKPDVRFVIHHSLPKSIENYYQESGRAGRDGLPATCILYYRMSDIFKQ 421
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
MI Q +T NL MV Y + V CRR+ HF
Sbjct: 422 SSMIQQE-----------------------QTGIANLYNMVRYASDTVTCRRVKLAEHFE 458
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSS 817
E ++ + C+K CD C K + D +K+ V ++ + + SS+
Sbjct: 459 EAWEPSWCQKQCDVCEKSSNSPGTATEDVSKEAVVVINIIEENLSSA 505
>gi|390436587|ref|ZP_10225125.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans IG1]
Length = 609
Score = 352 bits (902), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 219/654 (33%), Positives = 347/654 (53%), Gaps = 78/654 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IIN +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 QDTFGYQHFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A +L+ M +QQ ++ + + + KLLY+ PE++ + L
Sbjct: 78 MKDQVDQLLANGVAAAYLNSTMTREQQQTVMADCRTG--RVKLLYIAPERLMMDNFL--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+SL A A + +DEAHC+SQWGHDFRP+Y LG ++Q+FP PV+ALTATA + +
Sbjct: 133 -DSL-AHWQPAMLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELPVMALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKPTDQLLRYVQDQRGKCGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH ID QR VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGFSVGAYHAGIDSEQRGRVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ + + V
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKV-------------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE ++ CDNC
Sbjct: 357 ---PGPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QQPCDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D A+K + + GQ+F +I+EV RGS NQ +++ H+ L ++G GK +
Sbjct: 408 KRYDGLVEAQKALSSIYRVGQRFGMGYIVEVLRGSNNQRIREQGHDKLPVYGLGKDQSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ + + + ++ S L++ ++ A ++ G ++L P I +
Sbjct: 468 HWVSVLRQLIHLGLVTQNI-------AMHSALQLTEA-ARPVLRGEVPLMLAVPRLITAK 519
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
S S PAK G N KL++ LR LR + E E
Sbjct: 520 TKSSS---PAK---FHGG------------------NYDRKLFAKLRKLRKAIADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + +
Sbjct: 554 IPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLVMIKEHLDD 607
>gi|372276821|ref|ZP_09512857.1| ATP-dependent DNA helicase RecQ [Pantoea sp. SL1_M5]
Length = 609
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 219/654 (33%), Positives = 347/654 (53%), Gaps = 78/654 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IIN +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 QDTFGYQHFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A +L+ M +QQ ++ + + + KLLY+ PE++ + L
Sbjct: 78 MKDQVDQLLANGVAAAYLNSTMTRDQQQTVMADCRTG--RVKLLYIAPERLMMDNFL--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+SL A A + +DEAHC+SQWGHDFRP+Y LG ++Q+FP PV+ALTATA + +
Sbjct: 133 -DSL-AHWQPAMLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELPVMALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKPTDQLLRYVQDQRGKCGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH ID QR VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGFSVGAYHAGIDSEQRGRVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ + + V
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKV-------------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE ++ CDNC
Sbjct: 357 ---PGPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QQPCDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D A+K + + GQ+F +I+EV RGS NQ +++ H+ L ++G GK +
Sbjct: 408 KRYDGLVEAQKALSGIYRVGQRFGMGYIVEVLRGSNNQRIREQGHDKLPVYGLGKDQSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ + + + ++ S L++ ++ A ++ G ++L P I +
Sbjct: 468 HWVSVLRQLIHLGLVTQNI-------AMHSALQLTEA-ARPVLRGEVPLMLAVPRLITAK 519
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
S S PAK G N KL++ LR LR + E E
Sbjct: 520 TKSSS---PAK---FHGG------------------NYDRKLFAKLRKLRKAIADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + +
Sbjct: 554 IPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLVMIKEHLDD 607
>gi|427733629|ref|YP_007053173.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
gi|427368670|gb|AFY52626.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
Length = 719
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 233/659 (35%), Positives = 353/659 (53%), Gaps = 78/659 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG SFR QREII + D+ V+MPTGGGKSL +QLPAL+ G+T+V+S
Sbjct: 7 LENALKHHFGYDSFRSPQREIIVEALENRDLLVIMPTGGGKSLCFQLPALMKEGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L + IPATFL+ ++ + + +RE K KLLYV PE++ S+
Sbjct: 67 PLIALMQDQVDGLRKNGIPATFLNSSV--SPHKVRMREQAILAGKVKLLYVAPERLL-SE 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ ++ + ++ IDEAHCVS+WGHDFRP+Y+ + L+Q++PN P+ ALTATAT
Sbjct: 124 RFLPLLDLVHHQIGISAFAIDEAHCVSEWGHDFRPEYRQMISLRQRYPNVPIWALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL--------SYGHFFLL- 611
V+ D+++ LGL + SFNR NL+ + + V L G + L
Sbjct: 184 ERVRLDIIKQLGLKQPNVHIASFNRQNLYYEVRPKKKNSYVELLGLIQDNEGSGIIYCLT 243
Query: 612 -KEFYVVSLECGH---KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
K+ ++ + H A YH + +R+ Q ++ +D+ II AT+AFGMGINKPDV
Sbjct: 244 RKKVEELAFKLQHDKISALPYHAGLSDVERSENQTKFIRDDARIIVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ + +++E Y+QE GRAGRDG+ S C+L+ SYSD ++ +I Q EQ
Sbjct: 304 RFVVHYDISRNLESYYQESGRAGRDGESSRCMLFLSYSDVKTIEWLIDQKSNEQEQMIAK 363
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
H L +M+ Y E DCRR +QL +FGE+F N K
Sbjct: 364 H-----------------QLRQMIDYAEG-TDCRRAIQLSYFGERFTGNCGNCDNCNNPK 405
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+D T A K + V Q+F HI++V RGS Q V H+ LS +G GK
Sbjct: 406 ----PVEDWTIEAMKFLSCVARCKQRFGMKHIIDVLRGSKTQKVLSKGHDKLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+L ++ L+E+ +D Y +VLK+N F
Sbjct: 462 RTLDEW-RMLGRSLLHQGLLEQT--TDGY----AVLKLNA----------------FSLE 498
Query: 908 INSTKLSKSDVTPAKGSL-LSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
+ + S S V PAK + G+ S+ + D+ L+ LR LR L
Sbjct: 499 VMKKQRSVSVVVPAKEKVAWKGR---------SEKAEQADI-----LFQKLRELRKQLAD 544
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ V Y IFG++TL+ +++ P+T++E ++ G+G K+++YG + + I++ ++E
Sbjct: 545 --AQSVPPYVIFGDSTLRLMTQMKPKTKQEFSQLAGVGSHKLTQYGDKFIAVIKAYLQE 601
>gi|374334314|ref|YP_005091001.1| ATP-dependent DNA helicase RecQ [Oceanimonas sp. GK1]
gi|372984001|gb|AEY00251.1| ATP-dependent DNA helicase RecQ [Oceanimonas sp. GK1]
Length = 608
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 225/649 (34%), Positives = 353/649 (54%), Gaps = 81/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q EI+ A ++G D V+MPTGGGKSL YQ+PAL+ PG+T+V+SPL+SL
Sbjct: 22 QQVFGYQDFRDGQLEIVEAAVAGRDAMVIMPTGGGKSLCYQIPALLRPGLTVVVSPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS-DYCKYKLLYVTPEKVAKSDVLLR 504
++DQ+ L+ + A +++ ++ + +LR + + KLLYV+PE++ + + +
Sbjct: 82 MKDQVDTLVANGVAAAYINSSLS---RDTMLRHFTALRRGEIKLLYVSPERLLQHEFM-- 136
Query: 505 QLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
E L EL IDEAHC+SQWGHDFRP+Y LG LKQ FP+ PV+ALTATA + +
Sbjct: 137 --ERLGELEL-GLFAIDEAHCISQWGHDFRPEYAELGRLKQWFPHIPVMALTATADEATR 193
Query: 565 EDVVQALGLVNCIIFRQSFNRPNL-WMDCEK----------VAER-LQVGLSY-GHFFLL 611
+D++ L L +I SF+RPN+ + EK VAE+ Q G+ Y +
Sbjct: 194 QDMLGRLNLTAPLIHIASFDRPNIRYTLVEKFKGLDQLVRYVAEQNGQCGIVYCSSRKRV 253
Query: 612 KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+E L GH+AA YH + R VQ+++ +D+++I+ ATVAFGMGI+KP+VR+V+
Sbjct: 254 EEVAERLLAKGHRAASYHAGLPLELRQSVQERFIRDDLDIVVATVAFGMGIDKPNVRYVV 313
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ +PK+IE Y+QE GR GRDG S +L Y D RV+ ++ EQ
Sbjct: 314 HYDIPKNIESYYQETGRGGRDGLPSEALLLYDPGDVGRVRRLLENSDNEQQ--------- 364
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
L+ L M ++ E+ + CRR + L +FGE + ++ C NC
Sbjct: 365 --------LQVELYKLNVMAAFAES-LTCRRQVLLNYFGE-----YQREPCGNCDICLDP 410
Query: 792 IEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
++ D T+ A+K + V TGQ+F +++EV RG+ Q V++H H+ LS +G GK ++
Sbjct: 411 PKRYDGTEDAQKALSCVYRTGQRFGVLYVVEVLRGADTQRVREHGHDKLSTYGIGKDKSQ 470
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
+LR L+ L + + + + VL++ ++ A ++ G + L P +
Sbjct: 471 EHWVSVLRQLIHSGLLTQNITR-------NMVLQLTEA-ARPVLRGDVALELAEPRLVRV 522
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ K++ + L+ +LR LR L +EA
Sbjct: 523 KQKDKAESGLTRAE-------------------------DRALFKALRQLRKQLAEEA-- 555
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V Y +F +ATL L++ P+TE ELL ING+G K+ ++G LE +
Sbjct: 556 DVPPYVVFNDATLTELARYRPKTEAELLGINGVGVRKLERFGEAFLELL 604
>gi|24375725|ref|NP_719768.1| ATP-dependent DNA helicase RecQ [Shewanella oneidensis MR-1]
gi|24350662|gb|AAN57212.1|AE015857_5 ATP-dependent DNA helicase RecQ [Shewanella oneidensis MR-1]
Length = 607
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 226/673 (33%), Positives = 352/673 (52%), Gaps = 89/673 (13%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
Q ++ D P +++L +VFG FR QRE+I G D V+MPTGGGKSL YQL
Sbjct: 4 QLLNTHDDPLSERL----AQVFGYRDFRDGQREVIERVCRGEDCLVIMPTGGGKSLCYQL 59
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PAL+ GIT+V+SPL+SL++DQ+ LLQ + A +L+ + E+LR+L+ + K
Sbjct: 60 PALMMHGITIVVSPLISLMKDQVDSLLQTGVNAAYLNSSQPRELSLEVLRQLH--LGELK 117
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYV+PE++ +D + R ++SL L+ IDEAHC+SQWGHDFRP+Y LG LKQ F
Sbjct: 118 LLYVSPERLLTADFIER-MQSLP----LSMFAIDEAHCISQWGHDFRPEYAALGQLKQLF 172
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGH 607
P+ P++ALTATA + ++++ + LG +N SF+RPN+ VAE+L
Sbjct: 173 PHVPMMALTATADQATRQNICERLG-INPFKLLSSFDRPNIRY---TVAEKLNAANQLRQ 228
Query: 608 FFLLKEFYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
F L + + C G A YH + P +R VQ + KD+I+I
Sbjct: 229 FLLQQNGSSGIIYCSSRRRVDEVAERLTLQGFHAKAYHAGMTPEERGEVQDSFLKDQIDI 288
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ ATVAFGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+
Sbjct: 289 VVATVAFGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVR 348
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
H+I Q PG + + L M ++ E CRR + L +F E
Sbjct: 349 HLIEQS-------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDE 390
Query: 772 KFDSAHCKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQY 830
+ C NC ++ + ++ A+K++ + GQ+F +H++EV RGS
Sbjct: 391 S-----ALEPCGNCDICLDPPKRYNGSEDAQKVLSCIYRLGQRFGINHLIEVLRGSKGAA 445
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
+ H+ LS G GK + ++R L+ +++ + S + +N S A
Sbjct: 446 IVDRGHDKLSTWGIGKDKSHEYWLSVIRQLIHLGLASQDITR-------GSSITLNPS-A 497
Query: 891 HNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLS 950
++ G ++L P I T + + Q+ V LN
Sbjct: 498 RPILKGEVALMLAEPR-IQLTSIKRKTT-----------------------QSRVPLNYD 533
Query: 951 AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
KL++ L+ LR + +E + V Y +F +ATL ++ +P + E+L +NG+G+ K+S+
Sbjct: 534 RKLFARLKTLRREIAEE--QDVPPYLVFNDATLAEMAAMMPTSPGEMLAVNGVGERKLSR 591
Query: 1011 YGVRLLETIESTI 1023
+G L+ I + +
Sbjct: 592 FGGEFLDEIAAYL 604
>gi|373947884|ref|ZP_09607845.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS183]
gi|386326268|ref|YP_006022385.1| ATP-dependent DNA helicase RecQ [Shewanella baltica BA175]
gi|333820413|gb|AEG13079.1| ATP-dependent DNA helicase RecQ [Shewanella baltica BA175]
gi|373884484|gb|EHQ13376.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS183]
Length = 607
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 224/668 (33%), Positives = 349/668 (52%), Gaps = 91/668 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I G D V+MPTGGGKSL YQLPAL+
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMD 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ ++ + E+LR+L + + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLR--HGELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R ++SL LA IDEAHC+SQWGHDFRP+Y LG LKQ FP P++
Sbjct: 124 ERLLSADFIER-MQSLQ----LAMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPYVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++ + + LG ++ SF+RPN+ VAE+L HF +
Sbjct: 179 ALTATADQATRQSICERLG-IDPFRLLSSFDRPNIRY---TVAEKLNAANQLRHFLTQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + R VQ + KD+I+I+ ATVA
Sbjct: 235 GTNGIIYCSSRRRVDEVADRLCLQGFNAKAYHAGMTQEDRGAVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDARKVLSCIFRLGQRFGINHLIEVLRGSKGAPIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ L+ G GK + ++R L+ ++V + S + +N S A ++ G
Sbjct: 452 DKLTTWGIGKDKSHEYWLSVIRQLIHLGLASQDVTR-------GSSITLNPS-ARPVLKG 503
Query: 897 RQNVVLRFPSA-INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYS 955
++L P + +TK S Q++ LN KL++
Sbjct: 504 EVALMLAEPRIQLTTTKRKVS-------------------------QSKAPLNYDRKLFA 538
Query: 956 SLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRL 1015
L++LR + ++ + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G
Sbjct: 539 RLKLLRRTIAEQ--QDVPPYLVFNDATLAEMAAMMPTSAGEMLAVNGVGERKLSRFGDAF 596
Query: 1016 LETIESTI 1023
L+ I + +
Sbjct: 597 LDEIAAYL 604
>gi|50123092|ref|YP_052259.1| ATP-dependent DNA helicase RecQ [Pectobacterium atrosepticum
SCRI1043]
gi|49613618|emb|CAG77069.1| ATP-dependent DNA helicase [Pectobacterium atrosepticum SCRI1043]
Length = 608
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 222/655 (33%), Positives = 344/655 (52%), Gaps = 86/655 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EII+AT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q E++ + + KLLY+ PE++ ++ L
Sbjct: 78 MKDQVDQLQAYGVSAACLNSTQTREQQFEVMAGCRTG--QIKLLYIAPERLT-TESFLDH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L A ++ I +DEAHC+SQWGHDFRP+Y+ LG +KQ+FP+ P +ALTATA + +
Sbjct: 135 L----AHWQISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLPFIALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + +I SF+RPN LWM + A+R + G+ Y +
Sbjct: 191 DIVRLLDLQSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQ--AQRGKSGIIYCNSRSR 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDISARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 309 VHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA--HCKKTCDNCSKI 788
+G L+ L M ++ E CRRL+ L +FGE A +C D +
Sbjct: 357 -----AGPQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQEACGNCDICLDPPKRY 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+E A+K + V GQ+F +I+EV RG+ NQ ++ H+ L ++G GK
Sbjct: 411 DGLVE------AQKALSCVYRVGQRFGIGYIVEVLRGANNQRIRDFGHDKLPVYGIGKDK 464
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
++ +LR L+ L + + ++ S +++ + A ++ G + L P I
Sbjct: 465 SQEHWVSVLRQLIHLGLLNQNI-------TMHSAVQLTEP-ARPVLRGEMPLQLAVPRVI 516
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
N L P N Q N KL++ LR LR + E
Sbjct: 517 N--------------------LKPRAN------QKSYGGNYDRKLFAKLRKLRKSIADE- 549
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ + Y +F +ATL +++ +P T ELL ING+G K+ ++G + I +
Sbjct: 550 -DNIPPYVVFSDATLLEMAELMPITAGELLNINGVGHRKLERFGAPFMNMIRDHV 603
>gi|126172636|ref|YP_001048785.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS155]
gi|386339411|ref|YP_006035777.1| RecQ familyATP-dependent DNA helicase [Shewanella baltica OS117]
gi|125995841|gb|ABN59916.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS155]
gi|334861812|gb|AEH12283.1| ATP-dependent DNA helicase, RecQ family [Shewanella baltica OS117]
Length = 607
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 224/668 (33%), Positives = 349/668 (52%), Gaps = 91/668 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I G D V+MPTGGGKSL YQLPAL+
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMD 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ ++ + E+LR+L + + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLR--HGELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R ++SL LA IDEAHC+SQWGHDFRP+Y LG LKQ FP P++
Sbjct: 124 ERLLSADFIER-MQSLQ----LAMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPYVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++ + + LG ++ SF+RPN+ VAE+L HF +
Sbjct: 179 ALTATADQATRQSICERLG-IDPFRLLSSFDRPNIRY---TVAEKLNAANQLRHFLTQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + R VQ + KD+I+I+ ATVA
Sbjct: 235 GTNGIIYCSSRRRVDEVADRLCLQGFNAKAYHAGMTQEDRGAVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIFRLGQRFGINHLIEVLRGSKGAPIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ L+ G GK + ++R L+ ++V + S + +N S A ++ G
Sbjct: 452 DKLTTWGIGKDKSHEYWLSVIRQLIHLGLASQDVTR-------GSSITLNPS-ARPVLKG 503
Query: 897 RQNVVLRFPSA-INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYS 955
++L P + +TK S Q++ LN KL++
Sbjct: 504 EVALMLAEPRIQLTTTKRKVS-------------------------QSKAPLNYDRKLFA 538
Query: 956 SLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRL 1015
L++LR + ++ + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G
Sbjct: 539 RLKLLRRTIAEQ--QDVPPYLVFNDATLAEMAAMMPTSAGEMLAVNGVGERKLSRFGDAF 596
Query: 1016 LETIESTI 1023
L+ I + +
Sbjct: 597 LDEIAAYL 604
>gi|217971615|ref|YP_002356366.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS223]
gi|217496750|gb|ACK44943.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS223]
Length = 607
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 224/668 (33%), Positives = 349/668 (52%), Gaps = 91/668 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I G D V+MPTGGGKSL YQLPAL+
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMD 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ ++ + E+LR+L + + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLR--HGELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R ++SL LA IDEAHC+SQWGHDFRP+Y LG LKQ FP P++
Sbjct: 124 ERLLSADFIER-MQSLQ----LAMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPYVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++ + + LG ++ SF+RPN+ VAE+L HF +
Sbjct: 179 ALTATADQATRQSICERLG-IDPFRLLSSFDRPNIRY---TVAEKLNAANQLRHFLTQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + R VQ + KD+I+I+ ATVA
Sbjct: 235 GTNGIIYCSSRRRVDEVADRLCLQGFNAKAYHAGMTQEDRGAVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIFRLGQRFGINHLIEVLRGSKGAPIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ L+ G GK + ++R L+ ++V + S + +N S A ++ G
Sbjct: 452 DKLTTWGIGKDKSHEYWLSVIRQLIHLGLASQDVTR-------GSSITLNPS-ARPVLKG 503
Query: 897 RQNVVLRFPSA-INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYS 955
++L P + +TK S Q++ LN KL++
Sbjct: 504 EVALMLAEPRIQLTTTKRKVS-------------------------QSKAPLNYDRKLFA 538
Query: 956 SLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRL 1015
L++LR + ++ + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G
Sbjct: 539 RLKLLRRTIAEQ--QDVPPYLVFNDATLAEMAAMMPTSAGEMLAVNGVGERKLSRFGDAF 596
Query: 1016 LETIESTI 1023
L+ I + +
Sbjct: 597 LDEIAAYL 604
>gi|152998934|ref|YP_001364615.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS185]
gi|151363552|gb|ABS06552.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS185]
Length = 607
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 224/668 (33%), Positives = 350/668 (52%), Gaps = 91/668 (13%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P +++L +VFG FR QRE+I G D V+MPTGGGKSL YQLPAL+
Sbjct: 10 DDPLSQRL----AQVFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMD 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GIT+V+SPL+SL++DQ+ LLQ + A +L+ ++ + E+LR+L + + KLLYV+P
Sbjct: 66 GITIVVSPLISLMKDQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLR--HGELKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ +D + R ++SL LA IDEAHC+SQWGHDFRP+Y LG LKQ FP P++
Sbjct: 124 ERLLSADFIER-MQSLQ----LAMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPYVPMM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++ + + LG ++ SF+RPN+ VAE+L HF +
Sbjct: 179 ALTATADQATRQSICERLG-IDPFRLLSSFDRPNIRY---TVAEKLNAANQLRHFLTQQN 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C G A YH + R+ VQ + KD+I+I+ ATVA
Sbjct: 235 GTNGIIYCSSRRRVDEVADRLCLQGFNAKAYHAGMTQEDRSAVQDSFLKDQIDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + T+ A+K++ + GQ+F +H++EV RGS + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGTEDAQKVLSCIFRLGQRFGINHLIEVLRGSKGAPIVDRGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ L+ G GK + ++R L+ ++V + S + +N S A ++ G
Sbjct: 452 DKLTTWGIGKDKSHEYWLSVIRQLIHLGLASQDVTR-------GSSITLNPS-ARPVLKG 503
Query: 897 RQNVVLRFPSA-INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYS 955
++L P + +TK S Q++ LN KL++
Sbjct: 504 EVALMLAEPRIQLTTTKRKVS-------------------------QSKAPLNYDRKLFA 538
Query: 956 SLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRL 1015
L++LR + ++ + V Y +F +ATL ++ +P + E+L +NG+G+ K+S++G
Sbjct: 539 RLKLLRRTIAEQ--QDVPPYLVFNDATLAEMAAMMPTSAGEMLAVNGVGERKLSRFGDAF 596
Query: 1016 LETIESTI 1023
L+ I + +
Sbjct: 597 LDEIAAYL 604
>gi|339483748|ref|YP_004695534.1| ATP-dependent DNA helicase RecQ [Nitrosomonas sp. Is79A3]
gi|338805893|gb|AEJ02135.1| ATP-dependent DNA helicase RecQ [Nitrosomonas sp. Is79A3]
Length = 599
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 227/650 (34%), Positives = 341/650 (52%), Gaps = 78/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+VFG +FR Q E+I +G D VLMPTGGGKSL YQ+PAL+ G+ +V+SPL++L
Sbjct: 9 KEVFGYPAFRGQQAEVIAHLANGGDCLVLMPTGGGKSLCYQIPALLRDGVAIVVSPLIAL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+Q+Q+ L + + A L+ ++ E ++ E N +Y LLYV PE++ + L
Sbjct: 69 MQNQVAALHEIGVRAAVLNSSLSQQEAAQV--EQNLQAGEYDLLYVAPERLLTARFL--- 123
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+L R +A IDEAHCVSQWGHDFRP+Y L +L ++F P +ALTATA ++
Sbjct: 124 --NLITRIPIALFAIDEAHCVSQWGHDFRPEYSQLSVLHERFSEVPRIALTATADMDTRK 181
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSY---------GHFFLL---- 611
++++ LGL +F SF+RPN+ + +K R Q+ L++ G + L
Sbjct: 182 EIIERLGLDVARVFVSSFDRPNIRYQIIDKTNSRSQL-LTFIQAEHPGDAGIVYCLSRKK 240
Query: 612 -KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
+E ++ G +A YH ++ +R+ Q+++ ++E I+ AT+AFGMGI+KPDVRFV
Sbjct: 241 VEETTACLVDHGMRAVAYHAGMNMQERSLNQEKFLREEGIIMVATIAFGMGIDKPDVRFV 300
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
H LPKSIEGY+QE GRAGRDGQ ++ + Y D I+ + MI + A Q F
Sbjct: 301 AHLDLPKSIEGYYQETGRAGRDGQAANAWMVYGLGDVIQQRRMIEESQA-QLKFK----- 354
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ L M+S CE CRR L +FGE D+A C CD C
Sbjct: 355 ----------QVAARKLEAMLSLCET-TTCRRARLLSYFGETADTAPC-GNCDVCLNPPE 402
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
D T +K + V TGQ F + H+++V RG+L + V++ H+ +S G GK L +
Sbjct: 403 VW--DATVEVQKALSCVYRTGQNFGAGHLIDVLRGNLTERVQQWHHDRISTFGIGKDLPE 460
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R +V L + S+ +G++ + + ++ G+Q+V LR +
Sbjct: 461 RAWRAIFRQIVALGLLTTD---SEGHGALQLI-----EASRAVLKGQQSVFLRLQT---- 508
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKL-YSSLRMLRTLLVKEAG 969
P R Q + L+ + + + LR+ R KE
Sbjct: 509 --------------------KPERLSGKRQADDLALLDTAERYRWERLRLWRAKTAKE-- 546
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
GV AY IF +ATL L + P+TE+EL + GIG K+ KYG L+E +
Sbjct: 547 HGVPAYVIFHDATLHELVRLCPQTEDELRLVTGIGARKLDKYGNHLIEIL 596
>gi|123440598|ref|YP_001004592.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087559|emb|CAL10340.1| ATP-dependent DNA helicase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 616
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 223/661 (33%), Positives = 347/661 (52%), Gaps = 88/661 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 78 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVM-----DGCRSGQIKLLYIAPERLVM-ESF 131
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FPN PV+ALTATA +
Sbjct: 132 LDQLHQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPNLPVIALTATADEA 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+V+ L L +I SF+RPN LW + +R + G+ Y +
Sbjct: 188 TRGDIVRLLNLDQPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 245
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCL-----EEKP---- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+G + L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 --------AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQSCGNCDI 402
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 403 CLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREFDHDKLSVYGIGR 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +LR L+ L + + ++ S L++ ++ A ++ + L P
Sbjct: 463 EQSHEHWVSVLRQLIHLGLLSQNI-------AMFSALQLTEA-ARPVLRAELPLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K+ S + G N KL++ LR LR +
Sbjct: 515 -IQSLKVRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIAD 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
E + Y +F +ATL +++++P T ELL +NG+G+ K+ ++G + I +
Sbjct: 551 EG--NIPPYVVFNDATLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMAMIRDHVDNI 608
Query: 1027 Y 1027
+
Sbjct: 609 H 609
>gi|332159828|ref|YP_004296405.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310846|ref|YP_006006902.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418243645|ref|ZP_12870111.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420261107|ref|ZP_14763764.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433548693|ref|ZP_20504742.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica IP 10393]
gi|318607629|emb|CBY29127.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664058|gb|ADZ40702.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862578|emb|CBX72731.1| ATP-dependent DNA helicase recQ [Yersinia enterocolitica W22703]
gi|351776862|gb|EHB19136.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404511396|gb|EKA25274.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431790342|emb|CCO67782.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica IP 10393]
Length = 616
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 223/661 (33%), Positives = 347/661 (52%), Gaps = 88/661 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 78 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVM-----DGCRSGQIKLLYIAPERLVM-ESF 131
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FPN PV+ALTATA +
Sbjct: 132 LDQLHQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPNLPVIALTATADEA 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+V+ L L +I SF+RPN LW + +R + G+ Y +
Sbjct: 188 TRGDIVRLLNLDQPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 245
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCL-----EEKP---- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+G + L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 --------AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQSCGNCDI 402
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 403 CLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREFGHDKLSVYGIGR 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +LR L+ L + + ++ S L++ ++ A ++ + L P
Sbjct: 463 EQSHEHWVSVLRQLIHLGLLSQNI-------AMFSALQLTEA-ARPVLRAELPLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K+ S + G N KL++ LR LR +
Sbjct: 515 -IQSLKVRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIAD 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
E + Y +F +ATL +++++P T ELL +NG+G+ K+ ++G + I +
Sbjct: 551 EG--NIPPYVVFNDATLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMAMIRDHVDNI 608
Query: 1027 Y 1027
+
Sbjct: 609 H 609
>gi|218438410|ref|YP_002376739.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
gi|218171138|gb|ACK69871.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
Length = 709
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 227/665 (34%), Positives = 349/665 (52%), Gaps = 89/665 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K+ FG +FRP QREII + D+ V+MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 8 LETALKQYFGYDNFRPGQREIIEEALENRDLLVIMPTGGGKSLCFQLPALLKPGVTVVVS 67
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL+SL+QDQ+ LL I ATFL+ +++++E + RE K KLLYV PE++ S+
Sbjct: 68 PLISLMQDQVDALLDNGIGATFLNSSLDFSEIRS--RETAILRNKIKLLYVAPERLL-SE 124
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L+++ + ++ IDEAHCVS+WGHDFRP+Y+ L L++++PN P+ ALTATAT
Sbjct: 125 KFTPFLDTIAQQVGISAFAIDEAHCVSEWGHDFRPEYRQLRQLRKRYPNVPMFALTATAT 184
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEF------ 614
V++D++ L L N I SFNR NL+ D + +R SY LLK
Sbjct: 185 KRVQQDIILQLDLKNPGIHIASFNRTNLYYDIKPKEKR-----SYNQ--LLKYIRAHQGS 237
Query: 615 ---YVVSLECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGM 660
Y +S + AF YH + R Q ++ +D++ ++ ATVAFGM
Sbjct: 238 GIVYCMSRRNVDEIAFRLQNDGISALPYHAGLTDEARTLNQTRFIRDDVRVMVATVAFGM 297
Query: 661 GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAE 720
GINKPDVRFV+H LP+++E Y+QE GRAGRDG+ + C+L YS D +++++I Q
Sbjct: 298 GINKPDVRFVVHFDLPRNLESYYQESGRAGRDGEPAKCLLLYSLGDLKKIEYIIEQKTNP 357
Query: 721 QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKK 780
Q + + L +++ Y E +CRR + L +FGE+F +C
Sbjct: 358 QEQ-----------------KIARQQLRQVIDYAEG-TECRRTIVLRYFGERF-KGNC-N 397
Query: 781 TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
CDNC K +D T A+K + V ++F +I++V RG+ + ++++ H LS
Sbjct: 398 NCDNCRHPKPV--EDWTIEAQKFLSCVARCRERFGMGYIIDVLRGANRRRIEENGHHLLS 455
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
+G GK E + R L+ + + E VLK+N+
Sbjct: 456 TYGIGKDRTVPEWKNLGRSLIHQGLVDETTDG-------LPVLKLNKLSWE--------- 499
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
+LR ++ KS T + GK +P + +T L LR L
Sbjct: 500 ILRKQRSVEIAVARKSAET------VIGKYNPRKAET-------------EMLLDRLRQL 540
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R L V Y +F +++L+ ++++ P+T + I+G+ K+S+YG R + I
Sbjct: 541 RKYLAD--ANSVAPYVVFSDSSLKLMAEKKPQTLPDFANISGVTAHKLSQYGERFISEIR 598
Query: 1021 STIKE 1025
+E
Sbjct: 599 DFCQE 603
>gi|427713763|ref|YP_007062387.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427377892|gb|AFY61844.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 730
Score = 350 bits (898), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 233/656 (35%), Positives = 350/656 (53%), Gaps = 72/656 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG +FRP Q +II A+++ DV ++PTGGGKS+ +QLPAL+ GITLV+SPL++L
Sbjct: 8 KHYFGYEAFRPGQADIITASLNQQDVLAILPTGGGKSICFQLPALLKTGITLVVSPLIAL 67
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+ DQ++ L + I ATFL+ + E + + + + + KLLYV PE++ SD
Sbjct: 68 MLDQVVALQKNGIAATFLNSTLSAAEARGRIAAIMAG--EVKLLYVAPERLV-SDSFTAL 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE+++ ++ IV+DEAHCVS+WGHDFRPDY+ L L+++FP PV+ALTATAT V+
Sbjct: 125 LETIHQTVGISSIVVDEAHCVSEWGHDFRPDYRQLSRLRERFPTIPVIALTATATHRVRT 184
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERLQVGLS-----------YGHFFLLKE 613
D+ + L L + SFNRPNL+ + EK R +V LS G + +
Sbjct: 185 DITEQLSLKKPFVHVASFNRPNLYYEVIEK--SRGKVSLSELTGYIKETEGSGIIYCMSR 242
Query: 614 FYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
V L E G A YH + R Q ++ +D++ I+ ATVAFGMGINKPDVR
Sbjct: 243 KQVEKLASELNENGISALPYHAGLSNETRTDHQTRFIRDDVQIMVATVAFGMGINKPDVR 302
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FVIH+ LP++IEGY+QE GRAGRDG+ + C L++S D + I V ++ P
Sbjct: 303 FVIHYDLPQTIEGYYQESGRAGRDGEPARCTLFFSPGDIKQADWFIQNKVHPETN-EPLE 361
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
+ +A + L ++ +Y ++ + CRR L +FGE F +C + CDNC
Sbjct: 362 DEQRIAR---------QQLRQIAAYADSTL-CRRTTLLGYFGEVF-GGNCGQ-CDNCRFP 409
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K ++D T A+K + V T ++F HI+++ RGS V K+ H+ LS G G
Sbjct: 410 KP--KQDWTIEAQKFLSCVARTNERFGIRHIVDILRGSTQDKVIKYGHDKLSTFGIGLDK 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ E + R LV ++ + E D YG +L +N + + ++ G+ V + P+
Sbjct: 468 SIKEWQHLARSLVQQNLVNE---SDDGYG----ILTLN-TLSWAVLRGQHQVWVSMPN-- 517
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+LSK VT K L P + L+ SLR LR L +
Sbjct: 518 ---QLSKEKVTVEK----EPNLGP----------------IHTGLFQSLRTLRKELADD- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
+G+ Y IF +L+ +++ P + I G+G K+ YG + I S K
Sbjct: 554 -QGIAPYLIFTETSLKEMARYRPCSLASFSRITGVGDKKLEVYGSTFVNRIFSYCK 608
>gi|442772186|gb|AGC72851.1| ATP-dependent DNA helicase RecQ [uncultured bacterium A1Q1_fos_97]
Length = 607
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 221/648 (34%), Positives = 351/648 (54%), Gaps = 71/648 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG FRP Q +II A SG D VLMPTGGGKS+ +Q+PA+ PG +V+SPL+SL
Sbjct: 11 KRYFGYDQFRPLQADIIRAIFSGKDALVLMPTGGGKSVCFQIPAVTLPGTCIVVSPLISL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC-KYKLLYVTPEKVAKSDVLLR 504
++DQ+ L I A F++ ++ EQ LR S Y + LLYV+PEK+ + +
Sbjct: 71 MKDQVEGLRANGIAAAFINSAIDSREQ---LRVEESFYAGELDLLYVSPEKLVSGNFV-- 125
Query: 505 QLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
S+ R + IDEAHC+S WGHDFRP+Y +G+LKQ FP PV+ALTATA +
Sbjct: 126 ---SILKRGKINLFAIDEAHCISAWGHDFRPEYTQMGMLKQHFPRVPVVALTATADKLTR 182
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQ------------VGLSYGHFFLLK 612
+D+V L L IF SF+RPNL ++ +RLQ G+ Y
Sbjct: 183 KDIVDQLKLEEPGIFIASFDRPNLSLEVRPGQQRLQQIEDFIRKHPKQAGIIYTLSRKAT 242
Query: 613 EFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
E L + G KA YH + P +R+ +Q + D ++IICATVAFGMGI+K +VR+VI
Sbjct: 243 EDIADKLKQKGFKAEAYHAGLSPDRRSKIQDHFINDNLHIICATVAFGMGIDKSNVRWVI 302
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H++LPK++EGY+QE GRAGRDG ++ +L+YS++D ++ +I G
Sbjct: 303 HYNLPKNLEGYYQEIGRAGRDGAKADTLLFYSFADVSMLRDIIQNGE------------- 349
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
N A + E L RM Y E+ + CRR + L +F E S +C CD C
Sbjct: 350 NAAQN----EIQLVKLERMQQYAES-LACRRRILLAYFSENL-SENC-GNCDICRNPPQS 402
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
I D T A+K + V +Q +++V RGS + +K+ ++T+ +GAG+ ++
Sbjct: 403 I--DGTVIAQKALSAVYRLNEQVPMGMLIDVLRGSGRREIKQLGYDTIKTYGAGRDFSQW 460
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ L L+ +L +V ++VL++ + + ++ ++V L P++
Sbjct: 461 DWQHYLMQLINLGYL-------EVAYDAANVLRLTLA-SQEVLFKNRSVELIKPTSYKER 512
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ + + ++ P+Q + E L +L+ LR +R + ++ EG
Sbjct: 513 QEQEQ--------------ANAKTKAPTQLKKE---RLRDELFEHLRQIRKEIAQK--EG 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y IF +ATL+ ++ P+TE+++L ++G+G+ K+ ++G R ++ I
Sbjct: 554 IPPYLIFSDATLEEMAFSKPQTEDDMLAVSGVGEKKLVQFGYRFIKAI 601
>gi|304398161|ref|ZP_07380036.1| ATP-dependent DNA helicase RecQ [Pantoea sp. aB]
gi|440760554|ref|ZP_20939663.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans 299R]
gi|304354447|gb|EFM18819.1| ATP-dependent DNA helicase RecQ [Pantoea sp. aB]
gi|436425719|gb|ELP23447.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans 299R]
Length = 609
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 218/652 (33%), Positives = 345/652 (52%), Gaps = 80/652 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG FRP Q+ II+ +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL++D
Sbjct: 21 FGYQHFRPGQQTIIHQALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ LL + A +L+ M +QQ ++ + + + KLLY+ PE++ + L ES
Sbjct: 81 QVDQLLANGVAAAYLNSTMTRDQQQTVMADCRTG--RVKLLYIAPERLMMDNFL----ES 134
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L A A + +DEAHC+SQWGHDFRP+Y LG ++Q+FP PV+ALTATA + + D+V
Sbjct: 135 L-AHWQPAMLAVDEAHCISQWGHDFRPEYGALGKMRQRFPELPVMALTATADETTRNDIV 193
Query: 569 QALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEFYV 616
L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 194 NLLHMQDPLIQISSFDRPNIRYTLVEKFKPTDQLLRYVQDQRGKCGIIYCNSRAKVEDTA 253
Query: 617 VSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 675
L+ G YH ID QR VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H +
Sbjct: 254 ARLQSRGFSVGAYHAGIDSEQRGRVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 313
Query: 676 PKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVAN 735
P++IE Y+QE GRAGRDG + ++ Y +D ++ + + V
Sbjct: 314 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKV----------------- 356
Query: 736 SGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE--KFDSAHCKKTCDNCSKIKSFIE 793
G + + L M ++ E CRRL+ L +FGE + +C D + +E
Sbjct: 357 PGPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQQPCGNCDICLDPPKRYDGLVE 415
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
A+K + + GQ+F +I+EV RGS NQ +++ H+ L ++G GK +
Sbjct: 416 ------AQKALSGIYRVGQRFGMGYIVEVLRGSNNQRIREQGHDKLPVYGLGKDQSHEHW 469
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+LR L+ + + + ++ S L++ ++ A ++ G ++L P I +
Sbjct: 470 VSVLRQLIHLGLVTQNI-------AMHSALQLTEA-ARPVLRGEVPLMLAVPRLITAKTK 521
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
S S PAK L G N KL++ LR LR + E E +
Sbjct: 522 SSS---PAK--FLGG-------------------NYDRKLFAKLRKLRKAIADE--ENIP 555
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + +
Sbjct: 556 PYVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLVMIKEHLDD 607
>gi|253702373|ref|YP_003023562.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M21]
gi|251777223|gb|ACT19804.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M21]
Length = 599
Score = 350 bits (897), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 232/653 (35%), Positives = 349/653 (53%), Gaps = 83/653 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q EI+ +SG D FVLMPTGGGKSL YQ+PAL PG LV+SPL+SL++
Sbjct: 12 VFGFKSFRSPQHEIVETVLSGRDAFVLMPTGGGKSLCYQIPALCFPGTALVVSPLISLMK 71
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + I A + + E + +L +L++ + KLLYV PE++ SD L +++
Sbjct: 72 DQVDALRENGISAACYNSALGEAEARRVLAQLHAG--ELKLLYVAPERLL-SDGFLERIK 128
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L+ ++ IDEAHCVSQWGHDFRP+Y LG+L++ FP P++ALTATA A + D+
Sbjct: 129 PLS----ISLFAIDEAHCVSQWGHDFRPEYAQLGVLREIFPEIPMIALTATADAQTRGDI 184
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFFLLKEFYVVSL 619
+ LGL + F+RPN+ +D K +L LS G + L V +
Sbjct: 185 LSRLGLQGATCYCAGFDRPNIRYSVIDKNKPFNQLTGFLSSRKDEAGIVYALSRKRVEEV 244
Query: 620 E-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
G KAA YH + +R VQ+ + KD+I I+ ATVAFGMGI+K +VRFV+H+
Sbjct: 245 ARKLCAAGIKAAAYHAGLPDKERHRVQEAFLKDDIKIVVATVAFGMGIDKSNVRFVVHYD 304
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGV-AEQSPFTPGHNRFNV 733
+PKSIE Y+QE GRAGRDG + +L + Y D + +I G AEQ NR
Sbjct: 305 MPKSIESYYQETGRAGRDGLPADALLLFGYGDVAVARGLIGNGGNAEQ-------NR--- 354
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+E + N M + E CRR + L +FG++ + + C NC +S E
Sbjct: 355 ------IELHKLNC--MTGFAEAQT-CRRRVLLGYFGDRLE-----QDCGNCDICESPPE 400
Query: 794 K-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D T+ A+K + V GQ+F H+++V RGS N +++ +H+ LS G GK ++
Sbjct: 401 RFDATEDAQKALSCVYRVGQRFGMGHVIDVLRGSQNHRIQELKHDQLSTFGIGKQHSQEF 460
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+LR L+ +L +++ SVLK+ + A L+ G + L P TK
Sbjct: 461 WGNLLRQLIHLGYLEQDLAN-------FSVLKLTEG-ARPLLRGEVRLELAKP---RDTK 509
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ + K PS + L+ LR LR + E + V
Sbjct: 510 VVEKKSAAKK---------PSYDGV---------------LFQELRELRKGIADE--QQV 543
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ +F +ATL ++ ++P+ + ELL+I G+G+ K+++YG L I +++
Sbjct: 544 PPFVVFADATLAEMAAQMPKDKWELLKITGVGQHKMARYGDAFLRVIREHLEK 596
>gi|440680362|ref|YP_007155157.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
gi|428677481|gb|AFZ56247.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
Length = 724
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 228/659 (34%), Positives = 355/659 (53%), Gaps = 76/659 (11%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
+LE K FG FRP QR+II + D+ V+MPTGGGKSL +QLPAL+ PG+T+V+
Sbjct: 6 ELEKKLKYHFGYDQFRPGQRQIIEDALQNRDLMVVMPTGGGKSLCFQLPALLKPGLTVVV 65
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL++L+QDQ+ L NI ATFL+ ++ + + RE K +LLYV PE++ S
Sbjct: 66 SPLIALMQDQVEALRNNNISATFLNSSLNSYKVRS--REEAIMNGKVRLLYVAPERLV-S 122
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
D L L+ + + ++ IDEAHCVS+WGHDFRP+Y+ L +L++++P+ P +ALTATA
Sbjct: 123 DRFLPLLDVVKEKIGISTFAIDEAHCVSEWGHDFRPEYRQLKLLRKRYPDVPTIALTATA 182
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK-----VAERLQV-------GLSYGH 607
T V+ D+++ LGL I SFNR NL+ + AE L++ G+ Y
Sbjct: 183 TDRVRADIIEQLGLKQPSIHIASFNRQNLYYEVRAKSKRAYAEILEIVRENEGSGIIYCL 242
Query: 608 FFLLKEFYVVSLECGHKAAF-YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
+ L+ AA YH + +R+ Q ++ +D++ ++ AT+AFGMGINKPD
Sbjct: 243 TRKKVDELTFKLQKDKVAALPYHAGLSDDERSKNQTRFIRDDVRVMVATIAFGMGINKPD 302
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH LP++IEGY+QE GRAGRD + S C L++S++D ++ I+Q Q
Sbjct: 303 VRFVIHSDLPRNIEGYYQESGRAGRDDEPSRCTLFFSFADVKTIEWSINQKTDPQEQLIA 362
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ L +++ Y E DCRR +QL +FGE+F + +C CDNC
Sbjct: 363 -----------------KQQLRQVIDYAEG-TDCRRTIQLGYFGERF-AGNC-GNCDNCR 402
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
K +D T A K + V +++ +I++V RG+ NQ + + H+ LS +G GK
Sbjct: 403 YPKPV--QDWTIEAMKFLSCVARCKERYGMLYIIDVLRGAKNQKIALNGHDQLSTYGIGK 460
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
E + R L+ + L + D Y SVLK+N
Sbjct: 461 DKTVDEWRMLGRSLLHQGILEQ---TPDGY----SVLKLNPL------------------ 495
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
S ++ + T + ++ K+S + + EV++ L LR LR +
Sbjct: 496 ---SWEVMRKQRTVSIAVPIAQKISYEEGNV---KEAEVEV-----LMHRLRSLRKQIAD 544
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
E + V Y IF ++TL+ +++ P+T E E++G+G K+++YG + L I++ +E
Sbjct: 545 E--QAVPPYVIFHDSTLKLMAQVQPKTLHEFGELSGVGSHKLAQYGAKFLTEIQAYRQE 601
>gi|260770707|ref|ZP_05879637.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
gi|260614288|gb|EEX39477.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
Length = 611
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 219/652 (33%), Positives = 344/652 (52%), Gaps = 85/652 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG +FR Q+E+I + ++G D V+MPTGGGKSL YQ+PAL G+T+VISPL+SL
Sbjct: 21 RDVFGYQTFRDGQQEVIESAVAGRDALVIMPTGGGKSLCYQIPALAREGVTVVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ I ++S + KLLYV+PE+V + + R
Sbjct: 81 MKDQVDQLKANGVAAECVNSTQSREALMGIYNRMHSG--QLKLLYVSPERVLTGEFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L +L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FP P++ALTATA + +
Sbjct: 138 LHNLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKQQFPQVPIMALTATADDATRS 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY-----GHFFLL------KEF 614
D++ L L + ++ SF+RPN+ + + + + Y GH ++ K
Sbjct: 194 DILSRLNLTDPHVYLGSFDRPNIRYTLMEKHKPVSQVIRYLDTQKGHCGIIYCGSRKKVE 253
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
V C + +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 254 MVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + V+ Y +D ++ M+ +
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAVMLYDPADIAWLRRMLDE---------------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ G + T L M ++ E CRR + L +FGE D K C NC
Sbjct: 358 -KSDGPQKQVETHKLTAMSNFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ +S +G G+
Sbjct: 411 KHF---DATEEARKALSCVYRVNQSFGIGYVVEVLRGMQNIRIREHGHDKISTYGLGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 468 SHDYWVSIFRQLIHKGMLHQNITR-------NSTLQLTE-EARPLLRGDMSLELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD +K N KL++ LR LR + E
Sbjct: 520 TAVRAAKSDKLSSK-------------------------NYDKKLFAKLRKLRKSIADE- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL ++ +P + E+L ++G+G+ K+ KY L+ I+
Sbjct: 554 -EGLPPYVVFSDATLIDMADILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQ 604
>gi|346725926|ref|YP_004852595.1| DNA helicase [Xanthomonas axonopodis pv. citrumelo F1]
gi|346650673|gb|AEO43297.1| DNA helicase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 598
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 229/646 (35%), Positives = 349/646 (54%), Gaps = 75/646 (11%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+ I+ +G+D VLMPTGGGKSL YQ+PAL+ GI +V+SPL++L+
Sbjct: 11 RVFGYDDFRGPQQAIVEHVAAGNDALVLMPTGGGKSLCYQVPALLRDGIGIVVSPLIALM 70
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
QDQ+ L Q + A FL+ ++ Q + R L S LLYV PE++ L ++
Sbjct: 71 QDQVEALRQLGVRAEFLNSTLDAENAQRVERALLSG--DLDLLYVAPERL-----LTQRF 123
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
SL R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P+ P +ALTATA + +
Sbjct: 124 LSLLERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHIPRMALTATADPPTQRE 183
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSYG-HFFLLKEFYVVSLE---- 620
+ + L LV+ F +F+RPN+ + +K + R Q+ G H Y +S
Sbjct: 184 IAERLDLVDARHFVSTFDRPNIRYTVVQKDSARKQLQEFLGRHRGSAGIVYAMSRRKVEE 243
Query: 621 -----C--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
C G A YH + RA Q+++ +++ I+ AT+AFGMGI+KPDVRFV H
Sbjct: 244 TAQQLCAQGFNALPYHAGLPAEVRAENQRRFLREDGIIMAATIAFGMGIDKPDVRFVAHV 303
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKS+EGY+QE GRAGRDG + L Y D + +K MI QG A + R
Sbjct: 304 DLPKSLEGYYQETGRAGRDGDPAEAWLCYGLGDVVLLKQMIEQGEAAEE-----RKRLER 358
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
A L ++ YCE+ + CRR + L FGE + A CDNC +
Sbjct: 359 A-----------KLDHLLGYCES-MQCRRQVLLAGFGETY--AKPCGNCDNC--LTPAAA 402
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D T ++K + V +GQ+F H++++ RGS N+ +K+ H+ LS +G G+ L +
Sbjct: 403 WDATVASQKALSCVYRSGQRFGVGHLIDILRGSENERIKQLGHDQLSTYGIGRDLDERTW 462
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+ R LV L EV S+ +G L++ + + ++ G + V++R +
Sbjct: 463 RGVFRQLVAASLL--EV-DSEGHGG----LRLTDA-SRQVLKGERQVMMRREN------- 507
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
PA G + S R P QPQ+ L+++LR LR L KE + V
Sbjct: 508 ------PAAGR----ERSAQRTGLPVQPQD-------LALFNALRGLRADLAKE--QNVP 548
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
A+ IF ++TL++++++ P + + L + GIG K+++YG +L+E +
Sbjct: 549 AFVIFHDSTLRNIAEQRPTSIDALSRVGGIGGGKLARYGAQLIEIV 594
>gi|20093292|ref|NP_619367.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
gi|19918649|gb|AAM07847.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
Length = 909
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 227/692 (32%), Positives = 365/692 (52%), Gaps = 79/692 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG +FRP Q EII + DVFVLMPTGGGKS+ YQLP+L+ G+T+V+SPL+SL
Sbjct: 30 RQYFGYTAFRPLQEEIIRDVLDRKDVFVLMPTGGGKSICYQLPSLLLDGVTVVVSPLISL 89
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC--KYKLLYVTPEKVAKSDVLL 503
++DQ+ L I A M T+ +R++ S + + K+LY+ PE++ +
Sbjct: 90 MKDQVDGLEANGIAAAC----MNSTQSAREIRDVKSAFLENRLKILYIAPERLMMPGTI- 144
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGIL---KQKFPNTPVLALTATAT 560
+ + ++ IDEAHC+S+WGHDFRP+Y+ L +L K FP+ PV+ALTATAT
Sbjct: 145 ----TFLKKGKISLFAIDEAHCISEWGHDFRPEYRKLKLLRDPKTGFPDVPVIALTATAT 200
Query: 561 ASVKEDVVQALGL---VNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSY 605
V++D++ LGL ++ SFNR NL+ + + R + G+ Y
Sbjct: 201 GRVRKDIIVQLGLDLDPEKGLYVASFNRSNLYYEVRPKKDTFSEITDYLLRHRGEAGIIY 260
Query: 606 GHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
E L G +A YH + ++R+ Q+ + KD+++II AT+AFGMGI+K
Sbjct: 261 CQSRNNVETLTKKLNLAGFRALPYHAGLSDSERSRNQEMFIKDDVDIIVATIAFGMGIDK 320
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
+VRFVIH+ LP+++E Y+QE GR GRDG C+L++S D ++++ I+Q E+
Sbjct: 321 SNVRFVIHYDLPRNLESYYQETGRGGRDGSPCECILFFSRGDRFKIEYFIAQKTNEKEK- 379
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
+ + L +MV+YCE + CRR L +FGE+ SA C CD
Sbjct: 380 ----------------DISLVQLRQMVAYCEGN-KCRRQALLEYFGEEL-SASC-GNCDT 420
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C + K D T+ A+KL+ ++ Q+F ++++++V GS N+ V+K+RHE L HG
Sbjct: 421 CLRPKDTF--DGTEAARKLITCIQELNQRFGTNYVIDVLTGSKNKKVRKNRHEKLKSHGN 478
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ K E R L ++ L+E V G+ VLK+N S + ++ G ++V L
Sbjct: 479 GREFTK-EQWRSLASEMLNTGLLE------VSGTQYPVLKLN-SMSRKILNGSESVELVC 530
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK------------ 952
P + + + PA + K + + ++ D+ AK
Sbjct: 531 PEGF-IPEAEEIFIPPAPAGKVKAKAEDNIQPSTTEYSTATDILKKAKSGGLLKSGTEHD 589
Query: 953 --LYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
L+ L+ LR + + + Y IF + +L+ ++ + P+T EE I G+G K+ K
Sbjct: 590 PILFERLKALRKKIALK--RNLPPYIIFSDTSLKEMASKFPQTPEEFHSITGVGDHKLRK 647
Query: 1011 YGVRLLETIESTIKEFYKTDKNGSSSNDSNDS 1042
YG L+ I +++ +G ++ DS DS
Sbjct: 648 YGDDFLQEIGDYCRDYGLI--SGENAEDSGDS 677
>gi|126179385|ref|YP_001047350.1| ATP-dependent DNA helicase RecQ [Methanoculleus marisnigri JR1]
gi|125862179|gb|ABN57368.1| ATP-dependent DNA helicase RecQ [Methanoculleus marisnigri JR1]
Length = 605
Score = 349 bits (896), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 218/654 (33%), Positives = 340/654 (51%), Gaps = 81/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+K FG SF P+Q EI++A ++G DV +M TGGGKSL YQLPAL+ G+T+V+SPL++L
Sbjct: 9 EKYFGYTSFLPHQEEIVDAVLAGRDVLAVMATGGGKSLCYQLPALVFGGLTVVVSPLIAL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L IPA ++ ++ + EQ+ + R + + ++LYV+PE+ + L
Sbjct: 69 MKDQVDGLRANGIPAATINSSLGYGEQKIVERVILEG--RIRILYVSPERAVQPFFL--- 123
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL A+ + I IDEAHC+S WGH+FRP+Y+ L +LK++FP PV+ALTATA +V+
Sbjct: 124 --SLIAKADVRLIAIDEAHCISMWGHNFRPEYRRLRVLKERFPTVPVIALTATAIPAVQN 181
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D+ L L N F SFNR NL A ++Y G + + V
Sbjct: 182 DIAVELALSNPARFVGSFNRKNLTYRVVPKARYFPRLVAYLNEHKNDAGIIYCFSQKATV 241
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L + G A YH + A RA Q+ +S+ ++ IICATVAFGMGI+KPDVRFVIH
Sbjct: 242 ELAKKLQDKGFSALPYHAGLPDAVRAEHQEAFSRGDVAIICATVAFGMGIDKPDVRFVIH 301
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPK IE Y+QE GRAGRDG+ C+LYYS D+ ++++I + A+ + + +
Sbjct: 302 TDLPKDIESYYQETGRAGRDGEPGDCILYYSRGDYGTIRYIIEKEGADATQKDVAYRKVG 361
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIKSF 791
M+ YCE CRR L +FGE + C CD C + +K F
Sbjct: 362 A----------------MLDYCETP-GCRRKFLLAYFGESYPEERC-GACDRCETPVKVF 403
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A ++ ++ TG++F +S+I +V GS + V+++ H+ LS +G+G+ +
Sbjct: 404 ---DGTEVAAAVIACIRETGERFGASYIADVLAGSKSARVRENGHDRLSAYGSGRGYTRD 460
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ ++ +V + F+ G VL V+ ++ ++ G+ V L P
Sbjct: 461 QWLLFIQEMVGKGFVAST-------GGRYPVL-VSNDRSRAVLAGKNPVPLAEPR----- 507
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ V P G D P + + A L +
Sbjct: 508 --PEGVVAPETGE--------KDYDEPLFLRLRRLRKVVADL----------------DH 541
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
V + +F + +L+ ++ P T LLEI G+ +AK+ +YG + L+ I+ E
Sbjct: 542 VPPFVVFHDRSLKEMATYYPTTGVALLEIYGVSEAKLKRYGRKFLDAIDKHCAE 595
>gi|387592527|gb|EIJ87551.1| hypothetical protein NEQG_02098 [Nematocida parisii ERTm3]
gi|387595153|gb|EIJ92778.1| hypothetical protein NEPG_02177 [Nematocida parisii ERTm1]
Length = 861
Score = 349 bits (895), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 197/452 (43%), Positives = 275/452 (60%), Gaps = 45/452 (9%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+KVF + FR NQ +II+A + G DVFVLMPTGGGKSLT+QLPA+I GIT+V+SPL++L
Sbjct: 321 RKVFRLYDFRQNQLQIISAVLDGRDVFVLMPTGGGKSLTFQLPAIISRGITVVVSPLLAL 380
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQ---EILRELNSDYCKY----------KLLYVT 492
IQDQI +LL IPA ++ ++ +E+ ++ + D K+ K++Y T
Sbjct: 381 IQDQIKNLLAKGIPAVAINSSLTKSERDIAYHMILMVGLDKDKHEPTEKRMPVTKIVYAT 440
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE + +S R LE+L+ + L R VIDEAHCVSQWGHDFRPDY L LK+++PN P+
Sbjct: 441 PELLVESQTFNRALETLSQQNRLTRFVIDEAHCVSQWGHDFRPDYTQLFRLKERYPNIPI 500
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSY------ 605
ALTATATA+VK+DV AL L NC IF QSFNRPNL + K ++ +S+
Sbjct: 501 TALTATATAAVKKDVTDALRLKNCKIFTQSFNRPNLKYRVIPKTKNQIAEIVSFIETHYP 560
Query: 606 ---GHFFLLK----EFYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATV 656
G + L E+ +L+ H +A +YH + +R ++W I +I AT+
Sbjct: 561 EDSGIIYCLSKRDCEWLAETLQKDHGIRAGYYHAGLSTKERTERAREWDSSHIRVIVATI 620
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGI+K DVR+V+H+SLPKS+EGY+QE GRAGRD S CVLYY+YSD ++ +MI +
Sbjct: 621 AFGMGIDKKDVRYVLHYSLPKSLEGYYQETGRAGRDQLNSECVLYYTYSDKKKIDYMIDR 680
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
N + S +L ++SYCEN DCRR L L +FGE F+
Sbjct: 681 ---------------NESASAEAKSRQRRHLQEVISYCENKTDCRRHLLLHYFGETFNK- 724
Query: 777 HCKKTCDNCSKIKSFIEKDVTDTAKKLVELVK 808
C CDNC + S + + A +++++V+
Sbjct: 725 FCGDGCDNCQRGGSVQQINCLQEALQIIKVVQ 756
>gi|404449892|ref|ZP_11014879.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
gi|403764371|gb|EJZ25272.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
Length = 726
Score = 349 bits (895), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 226/664 (34%), Positives = 350/664 (52%), Gaps = 83/664 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
++ N K++FG FR NQ I++ + G++ FV+MPTG GKSL YQLPA+I G +VIS
Sbjct: 5 VKENLKRIFGFSQFRGNQEPIVDNVLRGNNTFVIMPTGAGKSLCYQLPAVIQDGTAIVIS 64
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+++Q+ L I A FL+ + TE ++ +E+ S K KLLYV PE + K +
Sbjct: 65 PLIALMKNQVDQLNAFGINAHFLNSTLNKTETNKVKKEVLSG--KTKLLYVAPESLTKEE 122
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL-GILKQKFPNTPVLALTATA 559
+L ++ L+ + IDEAHC+S+WGHDFRP+Y+ + I+ Q N P++ALTATA
Sbjct: 123 NVLFLKDAK-----LSFVAIDEAHCISEWGHDFRPEYRKIKTIIAQIGSNLPIVALTATA 177
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE-----------RLQVGLSYGHF 608
T V++D+ + L + +F+ SFNR NL+ + + + Q G S G
Sbjct: 178 TPKVQQDIQRNLQMEEADLFKSSFNRTNLYYEVRPKVKNETKKQIIKYIKSQKGKS-GII 236
Query: 609 FLLKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
+ L V + G KAA YH ++ R Q + +E+++I AT+AFGMGI+
Sbjct: 237 YCLSRKKVEEIANLLKVNGIKAAPYHAGLEQNVRVKNQDDFLNEEVDVIVATIAFGMGID 296
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVR+VIH+ +PKS+EGY+QE GRAGRDG C+++Y Y D ++++ + P
Sbjct: 297 KPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYKYDDIVKLEKF-----NKDKP 351
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF--DSAHCKKT 781
T N ++L L M +Y E+ + CRR L +FGE D H
Sbjct: 352 VTEREN-------AKIL------LQEMAAYAESSI-CRRKFLLHYFGEMLEDDCGH---- 393
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CDNC K K + D + ++ VK T +F+ HI+ V RG N Y+K ++H+ LS+
Sbjct: 394 CDNCKKPKE--KFDGIEHLTAVIGAVKETSSRFNMDHIVNVVRGESNDYIKSYKHDKLSV 451
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
G GK + ++R +I FL ++++ V + + L+ +S I N
Sbjct: 452 FGLGKDEDERTWKTVIRQAMIGGFLEKDIENYGVIKTTAKGLEYLKSPYSFFIFKDHN-- 509
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
F I + D PA G GK KL+ L+ R
Sbjct: 510 --FEEMIEN---ETPDEVPAGG----GKA------------------YDEKLFELLKAER 542
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ K +G+ Y IF + +L+ ++ P + EEL +ING+G KV+K+G L+ IE+
Sbjct: 543 KKVAK--AKGLPPYVIFQDPSLEEMATVYPTSREELAQINGVGMGKVTKFGTPFLKLIEN 600
Query: 1022 TIKE 1025
++E
Sbjct: 601 YVEE 604
>gi|212556507|gb|ACJ28961.1| ATP-dependent DNA helicase RecQ [Shewanella piezotolerans WP3]
Length = 607
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 226/664 (34%), Positives = 346/664 (52%), Gaps = 87/664 (13%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
+L A+ + VFG +FR QRE+I +G D V+MPTGGGKSL YQLPAL PG+T+V+
Sbjct: 12 QLSASLQSVFGYRTFRDGQREVIEQICAGQDCLVIMPTGGGKSLCYQLPALQLPGLTVVV 71
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL+SL++DQ+ L+Q + A +L+ + E +IL+++ Y + KLLYV+PE++ ++
Sbjct: 72 SPLISLMKDQVDSLIQTGVSAAYLNSSQPREESLKILQQMR--YGELKLLYVSPERLLQA 129
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
+ R L LN ++ IDEAHC+SQWGHDFRP+Y LG L+Q+FP P++ALTATA
Sbjct: 130 SFIDR-LHELN----ISLFAIDEAHCISQWGHDFRPEYAALGRLRQQFPLVPIMALTATA 184
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSL 619
+ + D+ + L + SF+RPN+ VAE+L F + +
Sbjct: 185 DNATRVDICERLT-IEPFSLLTSFDRPNIRY---TVAEKLNAANQLRQFIDAQNGNSGIV 240
Query: 620 EC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
C GH+A YH +RA VQ ++ KD+++I+ ATVAFGMGIN
Sbjct: 241 YCSSRRRVDEVAERLRMQGHQAEAYHAGKTQEERADVQDRFLKDQLDIVVATVAFGMGIN 300
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
K +VR+V+H+ +PKS+E Y+QE GRAGRDG S ++ + +D RV+H+I Q
Sbjct: 301 KSNVRYVVHYDIPKSVEAYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQS------ 354
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
PG + + L M ++ E CRR + L +F E + C
Sbjct: 355 -EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES-----ALEPCG 397
Query: 784 NCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC +K + A+K++ + GQ+F +H++EV RGS V H LS
Sbjct: 398 NCDICLDPPKKYNGIQDAQKVLSCIYRLGQRFGVNHLIEVLRGSKAATVMDRGHNKLSTW 457
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK + ++R L+ +++ + S + +N S A ++ G ++L
Sbjct: 458 GIGKEKSHEHWLSVIRQLIHLGLANQDITR-------GSSVTLNPS-ARTVLKGEVELLL 509
Query: 903 RFPS-AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
P I STK R P P LN KL++ L++LR
Sbjct: 510 AEPRIVIQSTK--------------------RRGHNPKAP-----LNYDRKLFARLKLLR 544
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
L +E V Y +F +ATL ++ +P + ELL +NG+G+ K+ ++G L+ IE+
Sbjct: 545 RKLAEEL--DVPPYLVFNDATLAEMAAILPTSPGELLAVNGVGERKLERFGGEFLDEIEN 602
Query: 1022 TIKE 1025
+ E
Sbjct: 603 YLAE 606
>gi|393759811|ref|ZP_10348623.1| ATP-dependent DNA helicase [Alcaligenes faecalis subsp. faecalis NCIB
8687]
gi|393161623|gb|EJC61685.1| ATP-dependent DNA helicase [Alcaligenes faecalis subsp. faecalis NCIB
8687]
Length = 608
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 226/657 (34%), Positives = 339/657 (51%), Gaps = 85/657 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG SFR +Q EII + G D VLMPTGGGKSL YQ+PAL+ PG +V+SPL++L
Sbjct: 10 QEVFGYDSFRGSQHEIIETLIQGGDALVLMPTGGGKSLCYQIPALVRPGTGVVVSPLIAL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L + + A +L+ +W +E+ RE + + LLYV PE++ L
Sbjct: 70 MQDQVDALTELGVNAAYLNSTQDWQTAREVEREFLTG--QLDLLYVAPERLLTDRCL--- 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L AR ++ IDEAHCVSQWGHDFRP+Y GL +L Q++P P +ALTATAT +
Sbjct: 125 --DLLARGQISLFAIDEAHCVSQWGHDFRPEYLGLDLLAQRWPGVPRVALTATATQLTRV 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVG---LSY---------GHFFLLKE 613
++ Q L L F SF+RPN+ C ++ E+ +V LS+ G + L
Sbjct: 183 EIAQRLKLEQARHFVASFDRPNI---CYRIIEKNEVRKQLLSFIQEEHAGDAGIVYCLSR 239
Query: 614 FYV---VSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
V C G A YH +D QRA Q ++ ++E ++ AT+AFGMG+NKPDVR
Sbjct: 240 SRVEDTAEFLCKNGIHALPYHAGLDAQQRAINQARFLREEGVVMVATIAFGMGVNKPDVR 299
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV H LPKS+EGY+QE GRAGRDG+ ++ L Y D +++ MI+Q + + H
Sbjct: 300 FVAHIDLPKSVEGYYQETGRAGRDGEAATAWLAYGLQDVVQLHRMINQSQGDAA-----H 354
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
R G+ L+ M+ CE + CRR L +F + + CD C +
Sbjct: 355 RR----QQGQALDA-------MLGLCET-ISCRRQRLLAYFDQHIEPC---GNCDTC--L 397
Query: 789 KSFIEKDVTDTAKKLV----ELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
++ D T A+K++ L + GQ+F + H++++ G L VK+H H+ L++ G
Sbjct: 398 EAPQAWDGTVAAQKMLSTIYRLWRERGQRFGAGHLIDILLGKLTDRVKEHEHDKLTVFGV 457
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS-KAHNLIIGRQNVVLR 903
GK L +LR L+ + + + YG++ + K ++ R+ V R
Sbjct: 458 GKDLTDQAWRGVLRQLLAHSLVTVD---PEGYGTLLLTEASREVLKGERTLMLRRETVTR 514
Query: 904 FPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
P+A + P+ P + D + + +LR R
Sbjct: 515 GPAA-----------------------HRVKGQAPAGPALDPD---QQRRFEALRTWRAA 548
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ +E GV AY IF +ATL+ ++ R P +E +L I GIG K YG LL ++
Sbjct: 549 IARE--HGVPAYVIFHDATLREVAIRCPGSEADLEPITGIGVRKREAYGEALLRCVQ 603
>gi|375129367|ref|YP_004991462.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii NCTC 11218]
gi|315178536|gb|ADT85450.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii NCTC 11218]
Length = 611
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 219/652 (33%), Positives = 344/652 (52%), Gaps = 85/652 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG +FR Q+E+I + ++G D V+MPTGGGKSL YQ+PAL G+T+VISPL+SL
Sbjct: 21 RDVFGYQTFRDGQQEVIESAVAGRDALVIMPTGGGKSLCYQIPALAREGVTVVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ I ++S + KLLYV+PE+V + + R
Sbjct: 81 MKDQVDQLKANGVAAECVNSTQSREALMGIYNRMHSG--QLKLLYVSPERVLTGEFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L +L LA I +DEAHC+SQWGHDFRP+Y LG LKQ+FP P++ALTATA + +
Sbjct: 138 LHNLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKQQFPQVPIMALTATADDATRS 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY-----GHFFLL------KEF 614
D++ L L + ++ SF+RPN+ + + + + Y GH ++ K
Sbjct: 194 DILSRLNLTDPHVYLGSFDRPNIRYTLMEKHKPVSQVIRYLDTQKGHCGIIYCGSRKKVE 253
Query: 615 YVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
V C + +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 254 MVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + V+ Y +D ++ M+ +
Sbjct: 314 FDIPRNIESYYQEPGRAGRDGLPAEAVMLYDPADIAWLRRMLDE---------------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ G + T L M ++ E CRR + L +FGE D K C NC
Sbjct: 358 -KSDGPQKQVETHKLTAMSNFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F +++EV RG N +++H H+ +S +G G+
Sbjct: 411 KHF---DATEEARKALSCVYRVNQSFGIGYVVEVLRGMQNIRIREHGHDKISTYGLGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 468 SHDYWVSIFRQLIHKGMLHQNITR-------NSTLQLTE-EARPLLRGDMSLELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD +K N KL++ LR LR + E
Sbjct: 520 TAVRAAKSDKLSSK-------------------------NYDKKLFAKLRKLRKSIADE- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
EG+ Y +F +ATL ++ +P + E+L ++G+G+ K+ KY L+ I+
Sbjct: 554 -EGLPPYVVFSDATLIDMADILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQ 604
>gi|300777720|ref|ZP_07087578.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
gi|300503230|gb|EFK34370.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
Length = 734
Score = 349 bits (895), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 224/665 (33%), Positives = 347/665 (52%), Gaps = 79/665 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L KK FG +F+ Q +II+ + G D+FVLMPTGGGKSL YQLPALI G +V+S
Sbjct: 8 LSGELKKYFGFSTFKGQQEQIIDNLLGGKDIFVLMPTGGGKSLCYQLPALISEGTAIVVS 67
Query: 441 PLVSLIQDQI---MHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
PL++L+++Q+ L + A L+ ++ T+ +++ ++ S K KLLYV PE +
Sbjct: 68 PLIALMKNQVDAVNGLSSDDGVAHVLNSSLNKTQTKQVFDDIKS--GKTKLLYVAPESLI 125
Query: 498 KSDVL--LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLAL 555
K D L L++++ ++ IDEAHC+S+WGHDFRP+Y+ L + K N PV+AL
Sbjct: 126 KDDYLDFLKEVK-------ISFFAIDEAHCISEWGHDFRPEYRNLKQIIDKIANVPVIAL 178
Query: 556 TATATASVKEDVVQALGLVNCIIFRQSFNRPNLW--------MDCEKVAERLQVGLSYGH 607
TATAT V++D+ + LG+ N ++F++SFNRPNL+ +D E V Q G
Sbjct: 179 TATATPKVQDDIQKTLGMTNALVFKESFNRPNLYYEVRPKVNVDKEIVKFINQHKGKSGI 238
Query: 608 FFLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
+ L +EF + G A YH +D R Q ++ +E+++I AT+AFGMGI
Sbjct: 239 VYCLSRRKVEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGI 298
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
+KPDVRFVIH+ PKS+E Y+QE GRAGRDG C+ +Y D +++ ++Q
Sbjct: 299 DKPDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQ------ 352
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFD--SAHCKK 780
P R E + L +V Y E + RR L +FGE FD +
Sbjct: 353 --KPVSER----------EIGLQLLNEVVGYAETSM-SRRQYILYYFGESFDPVKGEGAR 399
Query: 781 TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
CDN S KD T KK +EL+ TG++F + ++ V G K ++ E S
Sbjct: 400 MCDNSSNPPKL--KDATADLKKALELIHDTGEKFKAKDLISVIAGKETAVTKSYKLEQSS 457
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
G GK + ILR +++FL +++ + YG VLK+ K N++ G+
Sbjct: 458 YFGFGKEEKDNYWKTILRQATVQNFLQKDI---ETYG----VLKIT-DKGRNVLNGKSKD 509
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
V + D+T AK Q Q + L L++ L+ L
Sbjct: 510 VFLIAED------REFDLTQAKAE-------------SDQVQQQAGGGLDQNLFNLLKEL 550
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + K+ G+ Y +F + +L+ ++ + P T +E+ +I G+G+ K KYG + I+
Sbjct: 551 RKKVAKK--HGIPPYTVFMDPSLEDMTVQYPITVDEITKIYGVGEGKAKKYGKEFADYIK 608
Query: 1021 STIKE 1025
+ +++
Sbjct: 609 TYVED 613
>gi|254523679|ref|ZP_05135734.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas sp. SKA14]
gi|219721270|gb|EED39795.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas sp. SKA14]
Length = 601
Score = 348 bits (894), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 226/647 (34%), Positives = 346/647 (53%), Gaps = 73/647 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q++I+ +GHD VLMPTGGGKSL YQ+PAL+ G +VISPL++L
Sbjct: 11 QRVFGYDDFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQVPALLRDGCGIVISPLIAL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ + REL + + +LYV PE++ L
Sbjct: 71 MQDQVEALRQLGVRAEYLNSTLDAETAGRVERELLAG--ELDMLYVAPERLLTGRFL--- 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL +R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P+ P +ALTATA +
Sbjct: 126 --SLLSRSHIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPDIPRIALTATADPPTQR 183
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-GLSYGHFFLLKEFYVVS----- 618
++ + L L F SF+RPN+ + +K R Q+ GH Y +S
Sbjct: 184 EIAERLDLAEARHFVSSFDRPNIRYTVVQKDNARKQLTDFLRGHRSEAGIVYCMSRRKVE 243
Query: 619 ----LECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
CG A YH + P RA Q+++ +++ ++CAT+AFGMGI+KPDVRFV H
Sbjct: 244 ETAEFLCGQGFNALPYHAGLPPEVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRFVAH 303
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKS+EGY+QE GRAGRDG+ + L Y D + +K MI Q A + R
Sbjct: 304 TDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEASE-------ERKQ 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ S L ++ YCE+ + CRR + L FGE + C CDNC +
Sbjct: 357 LERS---------KLDHLLGYCES-MQCRRQVLLAGFGETYPQP-C-GNCDNC--LTPPA 402
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K + V +GQ+F H++++ RGS N+ V++ H+ LS + G+ L
Sbjct: 403 AWDATVPAQKALSCVYRSGQRFGVGHLIDILRGSENEKVRQQGHDKLSTYAIGRDLDART 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ R LV L EV S+ +G + + S+A ++ G + + +R +A S+
Sbjct: 463 WRSVFRQLVAASLL--EV-DSEGHGGLR---LTDASRA--VLTGHRQISMRRDAAGTSSG 514
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ S R PQ+ L+++LR LR L +E + V
Sbjct: 515 RER---------------SAQRTGLSVLPQD-------LALFNALRGLRAELARE--QNV 550
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
A+ IF ++TL++++++ P + +EL + GIG K+S+YG RL+E +
Sbjct: 551 PAFVIFHDSTLRNIAEQRPTSLDELARVGGIGGTKLSRYGPRLVEIV 597
>gi|194366875|ref|YP_002029485.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia R551-3]
gi|194349679|gb|ACF52802.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia R551-3]
Length = 601
Score = 348 bits (894), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 225/647 (34%), Positives = 344/647 (53%), Gaps = 73/647 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q++I+ +GHD VLMPTGGGKSL YQ+PAL+ G +VISPL++L
Sbjct: 11 QRVFGYDDFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQVPALLRDGCGIVISPLIAL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ + REL + + +LYV PE++ L
Sbjct: 71 MQDQVEALRQLGVRAEYLNSTLDAETAGRVERELLAG--ELDMLYVAPERLLTGRFL--- 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL +R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P P +ALTATA +
Sbjct: 126 --SLLSRSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPEIPRIALTATADPPTQR 183
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVG-------LSYGHFFLLKEFYV- 616
++ + L L F SF+RPN+ + +K R Q+G G + + V
Sbjct: 184 EIAERLDLQEARHFVSSFDRPNIRYTVVQKDNARKQLGDFLRSHRSEAGIVYCMSRRKVE 243
Query: 617 --VSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
C G A YH + RA Q+++ +++ ++CAT+AFGMGI+KPDVRFV H
Sbjct: 244 ETAEFLCTQGFNALPYHAGLPSEVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRFVAH 303
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKS+EGY+QE GRAGRDG+ + L Y D + +K MI Q A G R
Sbjct: 304 TDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEA-------GEERKQ 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L ++ YCE+ + CRR + L FGE + C CDNC +
Sbjct: 357 LERG---------KLDHLLGYCES-MQCRRQVLLAGFGETYPKP-C-GNCDNC--LTPPA 402
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K + V +GQ+F H+++V RGS N+ V++ H+ LS + G+ L
Sbjct: 403 SWDATIPAQKALSCVYRSGQRFGVGHLIDVLRGSENEKVRQQGHDKLSTYAIGRDLDART 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ R LV L EV S+ +G L++ + + +++ GR+ + +R + ST
Sbjct: 463 WRSVFRQLVAASLL--EV-DSEGHGG----LRLTDA-SRDVLTGRRQISMRRDAVSTSTG 514
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ S R PQ+ L+++LR LR L +E + V
Sbjct: 515 RER---------------SAQRTGLSVLPQD-------LALFNALRGLRAELARE--QNV 550
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
A+ IF ++TL++++++ P + +EL + GIG K+S+YG RL+E +
Sbjct: 551 PAFVIFHDSTLRNIAEQRPTSLDELARVGGIGGTKLSRYGPRLVEIV 597
>gi|149057328|gb|EDM08651.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149057329|gb|EDM08652.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 999
Score = 348 bits (894), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 180/364 (49%), Positives = 238/364 (65%), Gaps = 17/364 (4%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
+ + S +FP TK++ +K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQL
Sbjct: 633 EHFQSLNFPHTKEMMKIFRKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 692
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYK 487
PA + PG+T+VISPL SLI DQ+ L +IPAT+L+G+ +E I +L+ K
Sbjct: 693 PACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLSKKDPIIK 752
Query: 488 LLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKF 547
LLYVTPEKV S+ L+ LE+L R+LLAR VIDEAHCVSQWGHDFR DY+ + +L+Q+F
Sbjct: 753 LLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQRF 812
Query: 548 PNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-----DCEKVAERLQVG 602
P+ PV+ALTATA V++D++ L ++ +F SFNR NL +KVA
Sbjct: 813 PSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVALDCLEW 872
Query: 603 LSYGHFFLLKEFYVVSL-EC----------GHKAAFYHGSIDPAQRAFVQKQW-SKDEIN 650
+ H + Y +S EC G A YH + + R VQ +W ++D
Sbjct: 873 IRKHHPYDSGIIYCLSRKECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQ 932
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
+ICAT+AFGMGI+KPDVRFV+H SLPKS+EGY+QE GRAGRDG+ S CVL+Y+Y D R+
Sbjct: 933 VICATIAFGMGIDKPDVRFVVHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRL 992
Query: 711 KHMI 714
K +I
Sbjct: 993 KRLI 996
>gi|344208534|ref|YP_004793675.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia JV3]
gi|343779896|gb|AEM52449.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia JV3]
Length = 601
Score = 348 bits (894), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 225/647 (34%), Positives = 346/647 (53%), Gaps = 73/647 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q++I+ +GHD VLMPTGGGKSL YQ+PAL+ G +VISPL++L
Sbjct: 11 QRVFGYDDFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQVPALLRDGCGIVISPLIAL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ + REL + + +LYV PE++ L
Sbjct: 71 MQDQVEALRQLGVRAEYLNSTLDAETAGRVERELLAG--ELDMLYVAPERLLTGRFL--- 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL +R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P P +ALTATA +
Sbjct: 126 --SLLSRSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQIPRIALTATADPPTQR 183
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-GLSYGHFFLLKEFYVVS----- 618
++ + L L F SF+RPN+ + +K R Q+ GH Y +S
Sbjct: 184 EIAERLDLQEARHFVSSFDRPNIRYTVVQKDNARKQLTDFLRGHRGEAGIVYCMSRRKVE 243
Query: 619 ----LECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
CG A YH + P RA Q+++ +++ ++CAT+AFGMGI+KPDVRFV H
Sbjct: 244 ETAEFLCGQGFNALPYHAGLPPDVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRFVAH 303
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKS+EGY+QE GRAGRDG+ + L Y D + +K MI Q A G R
Sbjct: 304 TDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEA-------GEERKQ 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ + L ++ YCE+ + CRR + L FGE + C CDNC +
Sbjct: 357 LERA---------KLDHLLGYCES-MQCRRQVLLAGFGETYPQP-C-GNCDNC--LTPPA 402
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K + V +GQ+F H++++ RGS N+ VK+ H+ LS + G+ L
Sbjct: 403 SWDATIPAQKALSCVYRSGQRFGVGHLIDILRGSENEKVKQQGHDKLSTYAIGRDLDART 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ R LV L EV S+ +G L++ + + +++ GR+ + +R A +++
Sbjct: 463 WRSVFRQLVAASLL--EV-DSEGHGG----LRLTDA-SRDVLTGRRQISMRRDPASSTSG 514
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ S R PQ+ L+++LR LR L +E + V
Sbjct: 515 RER---------------SAQRTGLSVLPQD-------LALFNALRGLRAELARE--QNV 550
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
A+ IF ++TL++++++ P + + L + GIG K+S+YG RL+E +
Sbjct: 551 PAFVIFHDSTLRNIAEQRPTSLDALARVGGIGGTKLSRYGPRLVEIV 597
>gi|119385383|ref|YP_916439.1| ATP-dependent DNA helicase RecQ [Paracoccus denitrificans PD1222]
gi|119375150|gb|ABL70743.1| ATP-dependent DNA helicase RecQ [Paracoccus denitrificans PD1222]
Length = 790
Score = 348 bits (894), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 218/672 (32%), Positives = 345/672 (51%), Gaps = 82/672 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FRP Q EI++A +G DV +MPTGGGKSL YQLPAL+ G+T+VISPL++L
Sbjct: 121 RQVFGFDAFRPGQEEIVDAVAAGRDVLAIMPTGGGKSLCYQLPALMRDGLTVVISPLIAL 180
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L +A + A L+ E E+LR LN+ + +LLY+ PE++A +
Sbjct: 181 MRDQVRALTEAGVAAAALTSGNSDEENSEVLRALNAR--ELRLLYMAPERLASGATI--- 235
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ R + I +DEAHCVSQWGHDFRPDY +G L++ + P+ A TATA A +E
Sbjct: 236 --PMLRRAGVQAIAVDEAHCVSQWGHDFRPDYLRVGELRRTL-SVPLAAFTATADAETRE 292
Query: 566 DVVQAL-GLVNCIIFRQSFNRPNLWMDCE------------KVAERLQVGLSYGHFFLLK 612
++V+ L F + F+RPN+ + + A R Q G+ Y
Sbjct: 293 EIVKRLFDGAQPQSFLRGFDRPNIHLAFQPKDGPRRQILDFAAARRGQSGIVYCGTRAKT 352
Query: 613 EFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
E +L E G A YHG ++P QR V+ ++ +++ I+ ATVAFGMGI+KPD+R+V
Sbjct: 353 ETLAGALNEAGLAAVAYHGGMEPDQRRKVEARFQREDGLIVVATVAFGMGIDKPDIRWVA 412
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKSIE Y+QE GR GRDG + + Y D + I +G+A H R
Sbjct: 413 HADLPKSIEAYYQEIGRGGRDGAPAETLTLYGPDDIRLRRGQIDEGLAPPERKAADHARL 472
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
N ++ E CRR+ L +FGE ++A C CD C
Sbjct: 473 NA----------------LLGLAEATA-CRRVALLRYFGE--EAAAC-GNCDICDNPPEC 512
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A+K++ V TGQ + + H+++V G++ +++ H+ L G G+ +AK
Sbjct: 513 F--DATEAAQKVLSAVLRTGQTYGAGHVIDVLTGTMTDRIRQRGHDRLPTFGVGRDMAKP 570
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ ++R ++ D + + ++ +G ++ + AH ++ G + + LR
Sbjct: 571 QWQAVIRQMLGRDLIRPDPER---HGGLAIT-----AAAHPVLRGEERITLR-------- 614
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ +T A+ +++ + +VD A L S+L+ R L + A
Sbjct: 615 ---RDAMTRARPAVVV--------------RTQVD-EEDAPLLSALKAKRRALAEAA--R 654
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDK 1031
V AY IF + TL +++ PRT +E+ +NG+G K+ YG L I + + +
Sbjct: 655 VPAYVIFPDRTLIEMAQSRPRTLDEMARVNGVGAKKLESYGEEFLRVIAGEVAPMHPARR 714
Query: 1032 --NGSSSNDSND 1041
G +S D D
Sbjct: 715 ALAGRASGDLFD 726
>gi|238763624|ref|ZP_04624584.1| ATP-dependent DNA helicase recQ [Yersinia kristensenii ATCC 33638]
gi|238698102|gb|EEP90859.1| ATP-dependent DNA helicase recQ [Yersinia kristensenii ATCC 33638]
Length = 610
Score = 348 bits (894), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 222/657 (33%), Positives = 346/657 (52%), Gaps = 88/657 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 78 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVM-----DGCRSGQIKLLYIAPERLVM-ESF 131
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA +
Sbjct: 132 LDQLHQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEA 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+V+ L L N +I SF+RPN LW + +R + G+ Y +
Sbjct: 188 TRGDIVRLLNLENPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 245
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCL-----EEKP---- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+G + L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 --------AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQSCGNCDI 402
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 403 CLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREFGHDKLSVYGIGR 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +LR L+ L + + ++ S L++ ++ A ++ + L P
Sbjct: 463 EQSHEHWVSVLRQLIHLGLLSQNI-------AMFSALQLTEA-ARPVLRAELPLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K+ S + G N KL++ LR LR +
Sbjct: 515 -IQSLKVRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIAD 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F + TL +++++P T ELL +NG+G+ K+ ++G + I +
Sbjct: 551 EG--NIPPYVVFNDTTLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMAMIRDHV 605
>gi|110597180|ref|ZP_01385469.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
gi|110341371|gb|EAT59836.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
Length = 597
Score = 348 bits (894), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 223/659 (33%), Positives = 338/659 (51%), Gaps = 90/659 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+KVFG FRPNQ +I+ A + DVF +MPTGGGKSL YQLPA++ PG +VISPL++L
Sbjct: 2 RKVFGFREFRPNQEKIVRAILEKRDVFAVMPTGGGKSLCYQLPAVLLPGTCMVISPLIAL 61
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ I A FL+ + E++ ++REL S+ LLYV PE+
Sbjct: 62 MKDQVDGARANGIRAAFLNSSQLPEERESVMRELLSN--SLDLLYVAPERFTFD------ 113
Query: 506 LESLNARELLARI-----VIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ RELL R+ VIDEAHCVS+WGHDFRPDY L L FP+ PV A TATAT
Sbjct: 114 ----HFRELLGRVNISMAVIDEAHCVSEWGHDFRPDYLSLSALVSLFPDLPVSAFTATAT 169
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC---EKV---------AERLQVGLSYGHF 608
V++D++ + L N +I R SF+RPNL+ D EK A + + G+ Y
Sbjct: 170 HRVQQDILDRIALRNPLIVRASFDRPNLFYDVRFKEKPDAQIVAILKANKGKAGIIYRTS 229
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
L+ G +A YH + +R Q+ + +DE+ +I AT+AFGMGI+K ++
Sbjct: 230 RKSVNDTAAMLQARGFRALPYHAGLSDDERKRNQEAFIRDEVEVIVATIAFGMGIDKSNI 289
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH LPKSIE Y+QE GRAGRDG+ + C L ++ D +V+ I + E
Sbjct: 290 RFVIHADLPKSIENYYQETGRAGRDGEPAHCTLLFAQGDIPKVRFFIDSMLDE------- 342
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
R L+ L R+ S+ V CRR+ L +FGE + +C +CD C+
Sbjct: 343 ------TERARALDA----LTRVTSFASTSV-CRRITLLNYFGETYPHENC-GSCDICTG 390
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ + D T A+ L+ + T ++F ++HI+++ GS NQ ++ H+ L +G G
Sbjct: 391 TREVV--DCTREAQMLLSAIVRTEERFGATHIIDIVMGSANQKIRDMGHDQLRTYGVG-- 446
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV-VLRFPS 906
K + + R L E + V K++ +L KA ++ G + + ++R
Sbjct: 447 --KGQTKKYWRQLADELLAQKVVAKAEGLYPTLYLL----PKAVKILKGEEQIEIVRV-- 498
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
L K KG + +L+ LR LR +
Sbjct: 499 ------LEKKAARAVKG--------------------DAGATFDQELFELLRTLRKQIAD 532
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
E +G+ Y +F + +L ++ PRT E +L ++G+G+ K+ +YG + L I+ I +
Sbjct: 533 E--QGIPPYLVFSDRSLHDMAAIFPRTSEAMLTVSGVGEVKLERYGRQFLRLIDRFISD 589
>gi|52841103|ref|YP_094902.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296889|ref|YP_123258.1| hypothetical protein lpp0930 [Legionella pneumophila str. Paris]
gi|397666546|ref|YP_006508083.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
gi|52628214|gb|AAU26955.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750674|emb|CAH12081.1| hypothetical protein lpp0930 [Legionella pneumophila str. Paris]
gi|395129957|emb|CCD08190.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
Length = 608
Score = 348 bits (893), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 227/648 (35%), Positives = 346/648 (53%), Gaps = 79/648 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFRP Q +II +SG DV VLMPTGGGKSL YQ+PA++ PG+ +V+SPL++L
Sbjct: 19 KKYFGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRPGVGIVVSPLIAL 78
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A + + ++ E + +L +L+ + + LLY+ PE++ + L R
Sbjct: 79 MEDQVTALKLQGIRAAYYNSSLTAEEARNVLNQLHHN--ELDLLYIAPERLISTSFLDRL 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E ++ IDEAHC+SQWGHDFRP+Y LG+LK FP+ P++ALTATA +E
Sbjct: 137 SECT-----ISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIALTATADKQTRE 191
Query: 566 DVVQALGLVNCIIFRQSFNRPNL------------WMDCEKVAERLQVGLSY-GHFFLLK 612
D+V L + SFNRPN+ ++ ++ Q G+ Y G ++
Sbjct: 192 DIVTKLN-YQPKKYVVSFNRPNIHYKVVPKTNAVKQLNLFLQSDTQQSGIIYCGTRHTVE 250
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E G KA YH + A R VQ + D I+I+ AT+AFGMGI+KP+VRFV+H
Sbjct: 251 HLTAKLQELGFKARAYHAGLPHAVRREVQNLFRYDRIDIVVATIAFGMGIDKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H LPKSIEGY+QE GRAGRDG + +L Y +D R++ I E+
Sbjct: 311 HDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIPLEEQ---------- 360
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
R +ETN N M+++ E CRR + L +F E C K CD C
Sbjct: 361 -----RHIETNKLN--HMLAFAEAS-HCRRQILLRYFDEP-SHTEC-KNCDVCDNPPQ-- 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T+ A+K + + Q + +H ++V RGSL++ +K+ HE LS G GK + +
Sbjct: 409 TADATEDAQKFLSCIYRLKQSYGLTHTIDVLRGSLSEKIKQSGHEHLSTFGIGKEKSANY 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP-SAINST 911
+ L+ +D+ ++++ + VL++ KA L+ G +++ L P + +NS+
Sbjct: 469 WKHLAWQLIHKDYCLQDMNHFN-------VLRLT-PKAIPLLKGEESISLTIPNNDLNSS 520
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K GK +PS +P+ S L+ LR LR L E E
Sbjct: 521 K-------------KKGKQNPS-----FKPE-------SNPLFEKLRALRRQLADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ IF +ATL +++ P+ ++LL ++G+G+ K+++YG LE +
Sbjct: 554 KPPFMIFSDATLHEMAQSKPKNSKQLLNVSGVGQHKLARYGHYFLEAL 601
>gi|393763185|ref|ZP_10351808.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
gi|392606102|gb|EIW88990.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
Length = 606
Score = 348 bits (893), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 226/642 (35%), Positives = 341/642 (53%), Gaps = 82/642 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K++FG S+R Q EII A ++G D FVL+PTGGGKSL YQLPAL P +T+V+SPL+SL
Sbjct: 10 KQIFGYSSWRDGQAEIIAAALAGRDCFVLLPTGGGKSLCYQLPALQLPKVTVVVSPLMSL 69
Query: 446 IQDQIMHLLQAN-IPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLR 504
++DQ+ LQAN I A +++ ++ E+L +L D + KLLYV PE++ + + R
Sbjct: 70 MKDQV-DTLQANGIAAAYVNSSLSREAVLEVLNQLRYD--ELKLLYVAPERLLQPQFIER 126
Query: 505 QLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
L+ + ++ IDEAHCVSQWGHDFRPDY L L+Q FP PV+ALTATA + +
Sbjct: 127 -LQEVG----VSLFAIDEAHCVSQWGHDFRPDYMALAQLRQHFPGVPVMALTATADPATQ 181
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFL-----L 611
+D+VQ L L I R SF+RPN+ ++ L+ L+Y G + +
Sbjct: 182 QDIVQQLALQQPFIHRGSFDRPNIRYTVQEKFRPLEQLLAYLKQQENHSGIIYCSSRRKV 241
Query: 612 KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
E E G KAA YH D R VQ + +D++ +I ATVAFGMG++KP++RFV+
Sbjct: 242 DELTAQLQEKGFKAAAYHAGHDATHRQQVQDAFKRDDLALIVATVAFGMGVDKPNIRFVV 301
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LP++IE Y+QE GRAGRDG + +L + +D R+K +
Sbjct: 302 HFELPRTIEAYYQETGRAGRDGVAAEALLLFDPADIGRMKRWLQ---------------- 345
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
N+ R E + L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 346 TEENNLRA-EVTWQRFLSMAAFAEAQT-CRRLVLLNYFGEAR-----QQPCGNCDICLNP 398
Query: 792 IEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
++ D T+ A+K + V Q F H++EV RGS +Q V H+ LS G GK L+
Sbjct: 399 PQRFDGTELAQKALSCVYRVNQNFGLHHVIEVLRGSQSQKVLDLGHDKLSTWGLGKELSH 458
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ L +++ + SV +L V A ++ G Q + L P ++
Sbjct: 459 DYWLSIFRQLIHHGLLQQDIS----HHSVLRLLPV----ARPILRGEQRLQLAVPRLQSA 510
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
K++ S KL+ D L++ LR LR + + +
Sbjct: 511 PKMA------------SSKLAVQHYDR--------------VLFARLRALRKAIAER--D 542
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
V + +F +ATL + +++P + +L ++G+G+ K+S+YG
Sbjct: 543 DVPPFVVFSDATLIDMCQKLPTDQPTMLSVSGVGQTKLSRYG 584
>gi|238750693|ref|ZP_04612192.1| ATP-dependent DNA helicase recQ [Yersinia rohdei ATCC 43380]
gi|238711083|gb|EEQ03302.1| ATP-dependent DNA helicase recQ [Yersinia rohdei ATCC 43380]
Length = 610
Score = 348 bits (893), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 222/657 (33%), Positives = 345/657 (52%), Gaps = 88/657 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTEGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 78 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVM-----DGCRSGQIKLLYIAPERLVM-ESF 131
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA +
Sbjct: 132 LDQLHQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEA 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+V+ L L N +I SF+RPN LW + +R + G+ Y +
Sbjct: 188 TRGDIVRLLNLENPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 245
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAHVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCL-----EEKP---- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+G + L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 --------AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQSCGNCDI 402
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 403 CLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREFGHDKLSVYGLGR 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +LR L+ L + + ++ S L++ ++ A ++ + L P
Sbjct: 463 EQSHEHWVSVLRQLIHLGLLSQNI-------AMFSALQLTEA-ARPVLRAELPLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K S + G N KL++ LR LR +
Sbjct: 515 -IQSLKARSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIAD 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F + TL +++++P T ELL +NG+G+ K+ ++G + I +
Sbjct: 551 EG--NIPPYVVFNDTTLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMAMIRDHV 605
>gi|327291741|ref|XP_003230579.1| PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Anolis
carolinensis]
Length = 451
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/410 (44%), Positives = 245/410 (59%), Gaps = 41/410 (10%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S + W+ DFPW+KK+ + F FRP Q E IN TM+G DVF++MPTGGGKSL
Sbjct: 63 SAAEDWNKEDFPWSKKVREVLRNSFKLPKFRPLQLETINVTMAGRDVFLVMPTGGGKSLC 122
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPA+ G TLVI PLVSL++DQ+M L Q + AT L+ + + + E+ S
Sbjct: 123 YQLPAVCSDGFTLVICPLVSLMEDQLMVLEQLKVSATLLNASSSKEHVKWVYTEMLSSSS 182
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
+ KL+YVTPEK+AKS + + +LE L I +DE HC SQWGHDFRPDY+ LGILK
Sbjct: 183 QLKLIYVTPEKIAKSKMFVSKLEKAYQAGRLTHIAVDEVHCCSQWGHDFRPDYKLLGILK 242
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-------------- 590
++FPN ++ LTATAT+ V D + L + CI F SFNRPNL+
Sbjct: 243 RQFPNASLIGLTATATSHVLHDAQKILCIQKCITFTASFNRPNLYYEVRQKSPVAQNFIE 302
Query: 591 DCEKVAERLQVGLS-YGHFFLLKEFYVVSL---ECGHKAAFYHGSIDPAQRAFVQKQWSK 646
D K+ R GLS + F K+ V++ + G KA YH +++P ++ V K+WS
Sbjct: 303 DIVKLINRRYKGLSGIIYCFSQKDAEQVTMSLQQLGIKAGTYHANMEPKDKSRVHKRWSA 362
Query: 647 DEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSD 706
+EI I+ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE GRAGRD Q++ C+LYY + D
Sbjct: 363 NEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYGFGD 422
Query: 707 FIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCEN 756
R+ M+ + N G+ + L MVSYC N
Sbjct: 423 IFRISTMVV-----------------MENVGQ------QKLYDMVSYCHN 449
>gi|251787844|ref|YP_003002565.1| ATP-dependent DNA helicase RecQ [Dickeya zeae Ech1591]
gi|247536465|gb|ACT05086.1| ATP-dependent DNA helicase RecQ [Dickeya zeae Ech1591]
Length = 599
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 220/650 (33%), Positives = 336/650 (51%), Gaps = 83/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q+ IINA +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 8 RETFGYQQFRPGQQAIINAAVSGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISL 67
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +QQ + + KLLY+ PE++ +D L Q
Sbjct: 68 MKDQVDQLQAYGVAAACLNSTQSREQQQAVFSACRRG--ELKLLYIAPERLT-TDGFLDQ 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N A I IDEAHC+SQWGHDFRP+Y+ LG +KQ+FP P++ALTATA + ++
Sbjct: 125 LAHWNT----ALIAIDEAHCISQWGHDFRPEYRALGQIKQQFPALPIVALTATADETTRQ 180
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+ + L L + + SF+RPN LW+ + +R + G+ Y +
Sbjct: 181 DIARLLDLRDPLTNISSFDRPNIRYTLVEKFKPLDQLWLFIQ--GQRGKSGIVYCNSRAK 238
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G YH ++ +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 239 VEDLCARLQNRGLSVGAYHAGLENDRRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 298
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 299 VHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCL-----EEKP------- 346
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G L+ L M ++ E CRRL+ L +FGE A C NC
Sbjct: 347 -----AGMQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGENRQQA-----CGNCDICLD 395
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + V GQ+F +I EV RG+ NQ +++ H+ L ++G GK
Sbjct: 396 PPRRYDGLVDAQKALSCVYRVGQRFGIGYIAEVLRGANNQRIREFGHDKLPVYGLGKDKT 455
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ + ILR L+ L + + S L++ +S A ++ G + L P I+
Sbjct: 456 QEQWVSILRQLIHLGLLAQNIAH-------HSALQLTES-ARPVLRGEVPLQLAVPRVIS 507
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K P Q N KL++ LR LR + E
Sbjct: 508 LSK-------------------------PRASQKSYGGNYDRKLFAKLRKLRKSIADE-- 540
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + Y +F +ATL +++ +P T ELL +NG+G+ K+ ++G + I
Sbjct: 541 DNIPPYVVFSDATLLEMAELLPVTASELLAVNGVGQRKLERFGAPFMTLI 590
>gi|262392866|ref|YP_003284720.1| ATP-dependent DNA helicase RecQ [Vibrio sp. Ex25]
gi|451976070|ref|ZP_21927241.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus E0666]
gi|262336460|gb|ACY50255.1| ATP-dependent DNA helicase RecQ [Vibrio sp. Ex25]
gi|451929977|gb|EMD77700.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus E0666]
Length = 611
Score = 348 bits (893), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 221/655 (33%), Positives = 348/655 (53%), Gaps = 85/655 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+E+I A + G D V+MPTGGGKSL YQ+PAL+ GITLVISPL+SL
Sbjct: 21 EEVFGYQTFRDGQQEVIEAAIEGKDSLVIMPTGGGKSLCYQIPALVRSGITLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ M E + ++S + KL+YV+PE+V D + R
Sbjct: 81 MKDQVDQLKANGVAAECVNSTMNREELLSVYNRMHSG--QLKLVYVSPERVLMRDFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ F + P +ALTATA + +
Sbjct: 138 LENLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVPFMALTATADDATRR 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D+++ L L ++ SF+RPN+ + EK ++ G+ Y E
Sbjct: 194 DILERLRLHEPQVYLGSFDRPNIRYTLVEKHKPVSQIIRYLATQKGSCGIIYCGSRKKVE 253
Query: 614 FYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 254 MVTEKLCNNHIRAAGYHAGMDTEERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 314 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE---------------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ G + + L M ++ E CRR + L +FGE + +K C NC
Sbjct: 358 -KDDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F ++++EV RG N V++H H+ +S +G G+
Sbjct: 411 KHF---DATEEARKALSCVYRVNQSFGMTYVVEVLRGMQNIRVREHGHDKISTYGIGRDH 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 468 SHDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVSLELAVPRLD 519
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD +K N KL++ LR LR + E
Sbjct: 520 TAARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE- 553
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 554 -DGLPPYVVFSDATLIDMAEMLPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|78048811|ref|YP_364986.1| DNA helicase [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|78037241|emb|CAJ24986.1| DNA helicase [Xanthomonas campestris pv. vesicatoria str. 85-10]
Length = 598
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 229/646 (35%), Positives = 349/646 (54%), Gaps = 75/646 (11%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q+ I+ +G+D VLMPTGGGKSL YQ+PAL+ GI +V+SPL++L+
Sbjct: 11 RVFGYDDFRGPQQAIVEHVAAGNDALVLMPTGGGKSLCYQVPALLRDGIGIVVSPLIALM 70
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
QDQ+ L Q + A FL+ ++ Q + R L S LLYV PE++ L ++
Sbjct: 71 QDQVEALRQLGVRAEFLNSTLDAENAQRVERALLSG--DLDLLYVAPERL-----LTQRF 123
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
SL R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P+ P +ALTATA + +
Sbjct: 124 LSLLERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHIPRMALTATADPPTQRE 183
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSYG-HFFLLKEFYVVSLE---- 620
+ + L LV+ F SF+RPN+ + +K + R Q+ G H Y +S
Sbjct: 184 IAERLDLVDARHFVSSFDRPNIRYTVVQKDSARKQLQEFLGRHRGSAGIVYAMSRRKVEE 243
Query: 621 -----C--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
C G A YH + RA Q+++ +++ I+ AT+AFGMGI+KPDVRFV H
Sbjct: 244 TAQQLCAQGFNALPYHAGLPAEVRAENQRRFLREDGIIMAATIAFGMGIDKPDVRFVAHV 303
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKS+EGY+QE GRAGRDG + L Y D + +K MI QG A +
Sbjct: 304 DLPKSLEGYYQETGRAGRDGDPAEAWLCYGLGDVVLLKQMIEQGEAAE------------ 351
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
R+ ++LL YCE+ + CRR + L FGE + A CDNC +
Sbjct: 352 -ERKRLERAKLDHLL---GYCES-MQCRRQVLLAGFGETY--AKPCGNCDNC--LTPAAA 402
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D ++K + V +GQ+F H++++ RGS N+ +K+ H+ LS +G G+ L +
Sbjct: 403 WDARVASQKALSCVYRSGQRFGVGHLIDILRGSENERIKQLGHDQLSTYGIGRDLDERTW 462
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+ R LV L EV S+ +G L++ + + ++ G + V++R +
Sbjct: 463 RGVFRQLVAASLL--EV-DSEGHGG----LRLTDA-SRQVLKGERQVMMRREN------- 507
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
PA G + S R P QPQ+ L+++LR LR L KE + V
Sbjct: 508 ------PAAGR----ERSAQRTGLPVQPQD-------LALFNALRGLRADLAKE--QNVP 548
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
A+ IF ++TL++++++ P + + L + GIG K+++YG +L+E +
Sbjct: 549 AFVIFHDSTLRNIAEQRPTSIDALSRVGGIGGGKLARYGAQLIEIV 594
>gi|343497191|ref|ZP_08735268.1| ATP-dependent DNA helicase RecQ [Vibrio nigripulchritudo ATCC 27043]
gi|342819758|gb|EGU54595.1| ATP-dependent DNA helicase RecQ [Vibrio nigripulchritudo ATCC 27043]
Length = 612
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 223/654 (34%), Positives = 347/654 (53%), Gaps = 85/654 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG SFR Q E+I +++ G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL+
Sbjct: 23 EVFGYQSFRVGQEEVIQSSLEGKDSLVIMPTGGGKSLCYQIPALVKEGVTLVVSPLISLM 82
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ ME E ++ +N+ + KL+YV+PE+V D + R L
Sbjct: 83 KDQVDQLKANGVAAECINSTMERDELIKVYNRMNAG--QLKLVYVSPERVLTRDFMER-L 139
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
E L L+ I +DEAHC+SQWGHDFR +Y LG LKQ+FP P++ALTATA + ++D
Sbjct: 140 EHLR----LSMIAVDEAHCISQWGHDFRREYAALGELKQRFPYAPIMALTATADEATRKD 195
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMD-CEK-----------VAERLQVGLSYGHFFLLKEF 614
+V L L + + SF+RPN+ + EK ++ Q G+ Y E
Sbjct: 196 IVSRLHLEEPLEYLGSFDRPNIRYNLVEKHKPVSQVIRFLATQQGQCGVIYCGSRKKVEM 255
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ + KD+I ++ ATVAFGMGINKP+VRFV+H
Sbjct: 256 LTEKLCNNHIRAAGYHAGMDADERAYVQDAFQKDDIQVVVATVAFGMGINKPNVRFVLHF 315
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D + M+ +
Sbjct: 316 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWQRRMLDE----------------- 358
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ G + L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 359 KDDGPQKQVEAHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YSEKPCGNCDICLDPPK 412
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D + A+K + V Q F +++EV RG N V+++ H+ LS +G G+ +
Sbjct: 413 HF---DGMEAAQKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKLSTYGIGREHS 469
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I+R L+ + L + + + +S L++ + +A ++ G Q + L P
Sbjct: 470 HDYWVSIIRQLIHKGLLTQNITR-------NSTLQLTE-EARPVLRGEQPLELAVPRLDT 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ K +KSD KL ++ + KL++ LR LR + E
Sbjct: 522 AAKSAKSD-----------KL--------------INKHYDKKLFAKLRKLRKSIADE-- 554
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL ++ +P + E+L +NG+G+ K+ KY L+ I+ I
Sbjct: 555 DGLPPYVVFSDATLIDMADILPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEHI 608
>gi|383311275|ref|YP_005364085.1| ATP-dependent DNA helicase recQ [Pasteurella multocida subsp.
multocida str. HN06]
gi|386835294|ref|YP_006240611.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
multocida str. 3480]
gi|380872547|gb|AFF24914.1| ATP-dependent DNA helicase recQ [Pasteurella multocida subsp.
multocida str. HN06]
gi|385201997|gb|AFI46852.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
multocida str. 3480]
Length = 632
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 223/649 (34%), Positives = 351/649 (54%), Gaps = 82/649 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q E+I+AT+ G D V+M TG GKSL YQ+PAL G+TLVISPL+SL++
Sbjct: 33 VFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMK 92
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL I A +L+ + +TEQQ++ +L S KLLYV+PEKV +
Sbjct: 93 DQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSG--TLKLLYVSPEKVMTTSFF----- 145
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L + ++ + IDEAHC+SQWGHDFRP+Y LG LK FP P++ALTATA + ++D+
Sbjct: 146 HLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPYAPIMALTATADHATRQDI 205
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEFY 615
++ L L + ++ SF+RPN+ + EK + ++ + G+ Y + E
Sbjct: 206 LRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPMEQLCRFVLGQKGKSGIIYCNSRSKVERI 265
Query: 616 VVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
SL G A YH ++ AQR VQ+ + +D + ++ AT+AFGMGINK +VRFV+H
Sbjct: 266 AESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFD 325
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--RFN 732
LP+SIE Y+QE GRAGRD + VL+Y +D+ + ++ + P +P
Sbjct: 326 LPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILL-----EKPESPQRQIEALK 380
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ G E+ T CRRL+ L +FGE H +K C NC +
Sbjct: 381 LQAIGEFAESQT---------------CRRLVLLNYFGE-----HQQKPCQNCDICLDPP 420
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K++ + GQ+F + +++ V RG NQ +K ++HE LS++G GK +K
Sbjct: 421 KQYDGLIDAQKVMSTIYRIGQRFGAHYVIAVLRGLSNQKIKDNQHEQLSVYGIGKDKSKE 480
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V+ ++ L++ ++ A ++ G Q + L P
Sbjct: 481 HWQSVIRQLIHLGFIKQ------VFDHFNATLQLTEN-AKPILRGEQPLSLAMP------ 527
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ S L+ ++P R + Q + D L++ LR LR + + E
Sbjct: 528 ----------RISSLTSVVAPQRY---AMAQYDKD------LFARLRFLRKQIADK--EN 566
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ AY +F +ATLQ +++ P T+ E+L ING+G K ++ ++ I+
Sbjct: 567 IPAYIVFNDATLQEMAQYQPTTKAEMLAINGVGATKFERFAQPFMQIIQ 615
>gi|378775278|ref|YP_005177521.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida 36950]
gi|356597826|gb|AET16552.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida 36950]
Length = 632
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 223/649 (34%), Positives = 351/649 (54%), Gaps = 82/649 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q E+I+AT+ G D V+M TG GKSL YQ+PAL G+TLVISPL+SL++
Sbjct: 33 VFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMK 92
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL I A +L+ + +TEQQ++ +L S KLLYV+PEKV +
Sbjct: 93 DQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSG--TLKLLYVSPEKVMTTSFF----- 145
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L + ++ + IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++D+
Sbjct: 146 HLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATADHATRQDI 205
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEFY 615
++ L L + ++ SF+RPN+ + EK + ++ + G+ Y + E
Sbjct: 206 LRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPMEQLCRFVLGQKGKSGIIYCNSRSKVERI 265
Query: 616 VVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
SL G A YH ++ AQR VQ+ + +D + ++ AT+AFGMGINK +VRFV+H
Sbjct: 266 AESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFD 325
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--RFN 732
LP+SIE Y+QE GRAGRD + VL+Y +D+ + ++ + P +P
Sbjct: 326 LPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILL-----EKPESPQRQIEALK 380
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ G E+ T CRRL+ L +FGE H +K C NC +
Sbjct: 381 LQAIGEFAESQT---------------CRRLVLLNYFGE-----HQQKPCQNCDICLDPP 420
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K++ + GQ+F +++ V RG NQ +K ++HE LS++G GK +K
Sbjct: 421 KQYDGLIDAQKVMSTIYRIGQRFGVHYVIAVLRGLSNQKIKDNQHEQLSVYGIGKDKSKE 480
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V+ ++ L++ ++ A ++ G Q + L P
Sbjct: 481 HWQSVIRQLIHLGFIKQ------VFDHFNATLQLTEN-AKPILRGEQPLSLAMP------ 527
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ S L+ ++P R + Q + D L++ LR LR + + E
Sbjct: 528 ----------RISSLTSVVAPQRY---AMAQYDKD------LFARLRFLRKQIADK--EN 566
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ AY +F +ATLQ +++ P T+ E+L ING+G K ++ ++ I+
Sbjct: 567 IPAYIVFNDATLQEMAQYQPTTKAEMLAINGVGATKFERFAQPFMQIIQ 615
>gi|149908521|ref|ZP_01897183.1| ATP-dependent DNA helicase RecQ [Moritella sp. PE36]
gi|149808355|gb|EDM68292.1| ATP-dependent DNA helicase RecQ [Moritella sp. PE36]
Length = 606
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 218/650 (33%), Positives = 348/650 (53%), Gaps = 79/650 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q ++I ++G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL++
Sbjct: 18 VFGYQQFRMGQEDVIAHAVAGLDSLVIMPTGGGKSLCYQVPALVLGGLTIVLSPLISLMK 77
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL--LRQ 505
DQ+ L + + A +++ ++ E +I +L ++ + ++LY++PE++ D L L+Q
Sbjct: 78 DQVDALRASGVAAAYMNSSLARQESAQIYTDLQNN--RLQVLYLSPERLMVGDFLQYLQQ 135
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++ IDEAHC+S WGHDFRP+Y LG LKQ FP+ P++ALTATA + +
Sbjct: 136 FP-------ISLFAIDEAHCISSWGHDFRPEYNELGKLKQLFPHVPMMALTATADDATRA 188
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---------WMDCEKVAERLQVGLSYGHFFL-----L 611
D++ L + + SF+RPN+ +D K + Q G+S G + +
Sbjct: 189 DILNQLQMHEPKVSMSSFDRPNIRYSLVEKFKALDQLKRYVKQQDGVS-GIVYCTSRKRV 247
Query: 612 KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+E G A YH + +R Q+ + +DE++I+ ATVAFGMGINKP+VRFV+
Sbjct: 248 EEVAEGLARAGFDAKPYHAGLSQQERQDTQETFIRDELDIVVATVAFGMGINKPNVRFVV 307
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ LPK+IE Y+QE GRAGRDG + +L + +D +RV++M+ Q EQ H
Sbjct: 308 HYDLPKNIESYYQETGRAGRDGLPAEALLMFDPADIMRVRYMVEQTENEQQQRVEMH--- 364
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ NT MV++ E CRR + L +FGE F+ C CD C +
Sbjct: 365 ---------KLNT-----MVAFAEAQT-CRRQVLLNYFGE-FNDRSC-GNCDIC--LDPP 405
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D A+ + V GQ F +++++V RGS NQ VK+ H+ LS G GKH ++
Sbjct: 406 KRYDGAKDAQMALSCVYRVGQAFGMAYVVDVLRGSQNQRVKERGHDKLSTFGIGKHKSQE 465
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR LV L++ + + SSVL++ ++ A ++ G Q + L P T
Sbjct: 466 HWLSVLRQLVHSGLLLQNITR-------SSVLQLTEA-ARPVLRGEQALELAEPRLQPIT 517
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ K+ P + + N KL+++LR LR + E
Sbjct: 518 NVDKA---------------------PKRSSRIANFNYDRKLFAALRKLRKDIAD--SEN 554
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ Y +F +A+L +++ P+ + E+L+ING+G K+ ++G + L I +
Sbjct: 555 IPPYVVFNDASLAEMAEIKPQNDAEMLDINGVGHVKLERFGRQFLTKIAA 604
>gi|254230201|ref|ZP_04923594.1| ATP-dependent DNA helicase RecQ [Vibrio sp. Ex25]
gi|151937286|gb|EDN56151.1| ATP-dependent DNA helicase RecQ [Vibrio sp. Ex25]
Length = 633
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 221/655 (33%), Positives = 348/655 (53%), Gaps = 85/655 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+E+I A + G D V+MPTGGGKSL YQ+PAL+ GITLVISPL+SL
Sbjct: 43 EEVFGYQTFRDGQQEVIEAAIEGKDSLVIMPTGGGKSLCYQIPALVRSGITLVISPLISL 102
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ M E + ++S + KL+YV+PE+V D + R
Sbjct: 103 MKDQVDQLKANGVAAECVNSTMNREELLSVYNRMHSG--QLKLVYVSPERVLMRDFIER- 159
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ F + P +ALTATA + +
Sbjct: 160 LENLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVPFMALTATADDATRR 215
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D+++ L L ++ SF+RPN+ + EK ++ G+ Y E
Sbjct: 216 DILERLRLHEPQVYLGSFDRPNIRYTLVEKHKPVSQIIRYLATQKGSCGIIYCGSRKKVE 275
Query: 614 FYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 276 MVTEKLCNNHIRAAGYHAGMDTEERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVH 335
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 336 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE---------------- 379
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ G + + L M ++ E CRR + L +FGE + +K C NC
Sbjct: 380 -KDDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPP 432
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T+ A+K + V Q F ++++EV RG N V++H H+ +S +G G+
Sbjct: 433 KHF---DATEEARKALSCVYRVNQSFGMTYVVEVLRGMQNIRVREHGHDKISTYGIGRDH 489
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 490 SHDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVSLELAVPRLD 541
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KSD +K N KL++ LR LR + E
Sbjct: 542 TAARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE- 575
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 576 -DGLPPYVVFSDATLIDMAEMLPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 629
>gi|440228947|ref|YP_007342740.1| ATP-dependent DNA helicase RecQ [Serratia marcescens FGI94]
gi|440050652|gb|AGB80555.1| ATP-dependent DNA helicase RecQ [Serratia marcescens FGI94]
Length = 614
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 220/650 (33%), Positives = 340/650 (52%), Gaps = 82/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ II+A G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 22 RDTFGYQQFRPGQQTIIDAVTRGQDCLVVMPTGGGKSLCYQIPALMLEGLTLVVSPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A + +Q E++ S K+LY+ PE++ D L
Sbjct: 82 MKDQVDQLLANGVAAACYNSTQTREQQLEVMAGCRSG--AIKMLYIAPERLMM-DSFLSL 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+S A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP PV+ALTATA + +
Sbjct: 139 LDSCPP----AMLAVDEAHCISQWGHDFRPEYRALGQLKQRFPAMPVVALTATADETTRN 194
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+ + L L + +I SF+RPN LW + +R + G+ Y +
Sbjct: 195 DITRLLALQDPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNSRAK 252
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D A+RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 253 VEDTAARLQSRGLSVAAYHAGLDNARRAQVQEGFQRDDLQVVVATVAFGMGINKPNVRFV 312
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 313 VHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EEKP------- 360
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G+ L+ L M ++ E CRRL+ L +FGE A C NC
Sbjct: 361 -----AGQQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGKQEA-----CGNCDICLD 409
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D + A+K + + GQ+F +++EV RGS NQ +++ H+ L ++G G+
Sbjct: 410 PPKRYDGLEDARKALSAIGRVGQRFGIGYVVEVLRGSNNQRIREFGHDKLPVYGIGRDHT 469
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+LR L+ F+ + V ++ S L++ ++ A ++ G + L P I
Sbjct: 470 TEHWISVLRQLIHLGFITQNV-------AMHSALQLTEA-ARPVLRGEVELQLAVPR-IQ 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
S K P GS Q N KL++ LR LR + E
Sbjct: 521 SLK-------PRGGS----------------AQKSYGGNYDRKLFAKLRKLRKSIADE-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E + Y +F ++TL +++++P ELL +NG+G+ K+ ++G + I
Sbjct: 556 ENIPPYVVFNDSTLLEMAEQMPTRASELLSVNGVGQRKLERFGTPFMAMI 605
>gi|296106447|ref|YP_003618147.1| Superfamily II DNA helicase [Legionella pneumophila 2300/99 Alcoy]
gi|295648348|gb|ADG24195.1| Superfamily II DNA helicase [Legionella pneumophila 2300/99 Alcoy]
Length = 608
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 227/649 (34%), Positives = 347/649 (53%), Gaps = 81/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFRP Q +II +SG DV VLMPTGGGKSL YQ+PA++ PG+ +V+SPL++L
Sbjct: 19 KKYFGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRPGVGIVVSPLIAL 78
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A + + ++ E + +L +L+ + + LLY+ PE++ + L R
Sbjct: 79 MEDQVTALKLQGIRAAYYNSSLTAEEARNVLNQLHHN--ELDLLYIAPERLISTSFLDRL 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E ++ IDEAHC+SQWGHDFRP+Y LG+LK FP+ P++ALTATA +E
Sbjct: 137 SECT-----ISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIALTATADKQTRE 191
Query: 566 DVVQALGLVNCIIFRQSFNRPNL------------WMDCEKVAERLQVGLSY-GHFFLLK 612
D+V L + SFNRPN+ ++ ++ Q G+ Y G ++
Sbjct: 192 DIVTKLN-YQPKKYVVSFNRPNIHYKVVPKTNAVKQLNLFLQSDTQQSGIIYCGTRHTVE 250
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E G KA YH + +R VQ + D I+I+ AT+AFGMGI+KP+VRFV+H
Sbjct: 251 HLTAKLQELGLKARAYHAGLSHTERREVQNLFRYDRIDIVVATIAFGMGIDKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H LPKSIEGY+QE GRAGRDG + +L Y +D R++ I N
Sbjct: 311 HDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWI----------------MN 354
Query: 733 VA-NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ + R +ETN N M+++ E CRR + L +F E C K CD C
Sbjct: 355 IPLDEQRHIETNKLN--HMLAFAEAS-HCRRQILLRYFDEP-SHTEC-KNCDVCDNPPQ- 408
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A+K + + Q + +H ++V RGSL++ +K+ HE LS G GK + +
Sbjct: 409 -TTDATEDAQKFLSCIYRLKQSYGLTHTIDVLRGSLSEKIKQSGHEHLSTFGIGKEKSAN 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP-SAINS 910
+ L+ +D+ ++++ + VL++ KA L+ G +++ L P + +NS
Sbjct: 468 YWKHLAWQLIHKDYCLQDMNHFN-------VLRLT-PKAIPLLKGEESISLTIPNNDLNS 519
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+K GK SPS +P+ S L+ LR LR L E E
Sbjct: 520 SK-------------KKGKQSPS-----FKPE-------SNPLFEKLRALRRQLADE--E 552
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ IF +ATL +++ P+ ++LL ++G+G+ K+++YG LE +
Sbjct: 553 NKPPFMIFSDATLHEMAQLKPKNSKQLLNVSGVGQHKLARYGHYFLEAL 601
>gi|378776821|ref|YP_005185258.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507635|gb|AEW51159.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 608
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 226/648 (34%), Positives = 347/648 (53%), Gaps = 79/648 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFRP Q +II +SG DV VLMPTGGGKSL YQ+PA++ PG+ +V+SPL++L
Sbjct: 19 KKYFGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRPGVGIVVSPLIAL 78
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A + + ++ + + +L +L+ + + LLY+ PE++ + L R
Sbjct: 79 MEDQVTALKLQGIRAAYYNSSLTAEDARNVLNQLHHN--ELDLLYIAPERLISTSFLDRL 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E ++ IDEAHC+SQWGHDFRP+Y LG+LK FP+ P++ALTATA +E
Sbjct: 137 SECT-----ISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIALTATADKQTRE 191
Query: 566 DVVQALGLVNCIIFRQSFNRPNL------------WMDCEKVAERLQVGLSY-GHFFLLK 612
D+V L + SFNRPN+ ++ ++ Q G+ Y G ++
Sbjct: 192 DIVTKLN-YQPKKYVVSFNRPNIHYKVVPKTNAVKQLNLFLQSDTQQSGIIYCGTRHTVE 250
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E G KA YH + A+R VQ + D I+I+ AT+AFGMGI+KP+VRFV+H
Sbjct: 251 HLTAKLQELGFKARAYHAGLPHAERREVQNLFRYDRIDIVVATIAFGMGIDKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H LPKSIEGY+QE GRAGRDG + +L Y +D R++ I E+
Sbjct: 311 HDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIPLEEQ---------- 360
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
R +ETN N M+++ E CRR + L +F E C K CD C
Sbjct: 361 -----RHIETNKLN--HMLAFAEAS-HCRRQILLRYFDEP-SHTEC-KNCDVCDNPPQ-- 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T+ A+K + + Q + +H ++V RGSL++ +K+ HE LS G GK + +
Sbjct: 409 TADATEDAQKFLSCIYRLKQSYGLTHTIDVLRGSLSEKIKQSGHEHLSTFGIGKEKSANY 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP-SAINST 911
+ L+ +D+ ++++ + VL++ KA L+ G +++ L P + +NS+
Sbjct: 469 WKHLAWQLIHKDYCLQDMNHFN-------VLRLT-PKAIPLLKGVESISLTIPNNDLNSS 520
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K GK +PS +P+ S L+ LR LR L E E
Sbjct: 521 K-------------KKGKQNPS-----FKPE-------SNPLFEKLRALRRQLADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ IF +ATL +++ P+ ++LL ++G+G+ K+++YG LE +
Sbjct: 554 KPPFMIFSDATLHEMAQLKPKNSKQLLNVSGVGQHKLARYGHYFLEAL 601
>gi|254508582|ref|ZP_05120699.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus 16]
gi|219548524|gb|EED25532.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus 16]
Length = 611
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 222/653 (33%), Positives = 346/653 (52%), Gaps = 87/653 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR QRE+I + ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 21 EEVFGYQTFRDGQREVIESAVAGQDSLVIMPTGGGKSLCYQIPALVRSGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ M E + +N+ K L+YV+PE+V D + R
Sbjct: 81 MKDQVDQLKANGVAAECINSTMPREELIAVYNRMNAGVTK--LVYVSPERVLMRDFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ F + PV+ALTATA + ++
Sbjct: 138 LQGLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQAFSHVPVMALTATADDATRK 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++Q L L + + SF+RPN+ + EK +R Q G+ Y E
Sbjct: 194 DIMQRLQLNDPHTYLGSFDRPNIRYTLVEKHKPVSQVVRFLEGQRGQCGIIYCGSRKKVE 253
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
L C G +AA YH +D +RA+VQ + +D++ I+ ATVAFGMGINKP+VRFV+
Sbjct: 254 MVTEKL-CNNGLRAASYHAGLDADERAYVQDAFQRDDLQIVVATVAFGMGINKPNVRFVV 312
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H +P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 313 HFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADIGWLRRMLDE--------------- 357
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI--- 788
+ G + L M ++ E CRR + L +FGE + ++ C NC
Sbjct: 358 --KDDGPQKQVEAHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREQPCGNCDICLDP 409
Query: 789 -KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K F D T+ A+K + V Q F +++EV RG N V+++ H+ LS +G G+
Sbjct: 410 PKHF---DATEQAQKALSCVYRVNQSFGIGYVVEVLRGMQNIRVRENGHDKLSTYGLGRE 466
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ I R L+ + L + + + +S L++ +A L+ G ++ L P
Sbjct: 467 NSHDYWVSIFRQLIHKGLLFQNITR-------NSTLQLT-PEARPLLRGEVSLELAVPRL 518
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ + +KSD +K N KL++ LR LR + E
Sbjct: 519 DTAARAAKSDKLVSK-------------------------NYDKKLFAKLRKLRKAIADE 553
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 554 --DGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
>gi|381403551|ref|ZP_09928235.1| ATP-dependent DNA helicase RecQ [Pantoea sp. Sc1]
gi|380736750|gb|EIB97813.1| ATP-dependent DNA helicase RecQ [Pantoea sp. Sc1]
Length = 608
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 345/651 (52%), Gaps = 78/651 (11%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG FRP Q+ IIN +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL++D
Sbjct: 21 FGYQQFRPGQQTIINQALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ LL + A L+ M +QQ ++ + + + KLLY+ PE++ + L ++
Sbjct: 81 QVDQLLANGVAAACLNSTMTREQQQTVMADCRTG--RVKLLYIAPERLMMDNFL----DN 134
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L A + +DEAHC+SQWGHDFRP+Y LG L+++FP PV+ALTATA + + D+V
Sbjct: 135 L-AHWQPVMLAVDEAHCISQWGHDFRPEYGALGRLRERFPEVPVMALTATADETTRNDIV 193
Query: 569 QALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEFYV 616
L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 194 NLLHMQDPLIQISSFDRPNIRYTLVEKFKPTDQLLRYVQDQRGKCGIIYCNSRAKVEDTA 253
Query: 617 VSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 675
L+ G YH ID QRA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H +
Sbjct: 254 ARLQSRGLSVGAYHAGIDSEQRARVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 313
Query: 676 PKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVAN 735
P++IE Y+QE GRAGRDG + ++ Y +D ++ + + V
Sbjct: 314 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKV----------------- 356
Query: 736 SGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEK- 794
G + + L M ++ E CRRL+ L +FGE ++ CDNC ++
Sbjct: 357 PGPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QQPCDNCDICLDPPKRY 410
Query: 795 DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEAS 854
D A+K + + GQ+F +I+EV RGS NQ +++ H+ L ++G GK +
Sbjct: 411 DGLVEAQKALSGIYRVGQRFGMGYIVEVLRGSNNQRIREQGHDKLPVYGLGKDQSHEHWV 470
Query: 855 RILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLS 914
+LR L+ + + + ++ S L++ ++ A ++ G ++L P I + S
Sbjct: 471 SVLRQLIHLGLVTQNI-------AMHSALQLTEA-ARPVLRGEVPLMLAVPRLITAKTKS 522
Query: 915 KSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMA 974
S PAK G N KL++ LR LR + E E +
Sbjct: 523 SS---PAK---FHGG------------------NYDRKLFAKLRKLRKAIADE--ENIPP 556
Query: 975 YHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + E
Sbjct: 557 YVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLVMIKEHLDE 607
>gi|332291549|ref|YP_004430158.1| ATP-dependent DNA helicase RecQ [Krokinobacter sp. 4H-3-7-5]
gi|332169635|gb|AEE18890.1| ATP-dependent DNA helicase RecQ [Krokinobacter sp. 4H-3-7-5]
Length = 696
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 220/661 (33%), Positives = 343/661 (51%), Gaps = 84/661 (12%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
T++L + K FG +FRPNQ+EII + G D V+MPTGGGKS+ +QLPAL G+ L
Sbjct: 4 TQELHSLLKTHFGYDNFRPNQQEIIESVCRGDDALVIMPTGGGKSMCFQLPALALDGVAL 63
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL++L++DQ+ L I A + + E Q++L +L S L+YV PE +
Sbjct: 64 VISPLIALMKDQVDALRANGIRAAYYNSTQPLEETQQVLSDLQSGAID--LIYVAPESLQ 121
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
D +LNA ++ I IDEAHC+S WGHDFRP Y LG LK++FP P++ALTA
Sbjct: 122 MLD------GALNA-ATISLIAIDEAHCISSWGHDFRPAYTQLGYLKRRFPQAPLIALTA 174
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFF 609
TA S ++D+ LG+ N + SF+RPNL++D +R L + G +
Sbjct: 175 TADRSTQDDIADQLGISNAKKYVSSFDRPNLYLDVRPGQKRNDQILDFLEEHPGESGIIY 234
Query: 610 LLKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
L SL G+KAA YH + QR+ VQ+ + D IICAT+AFGMGI+K
Sbjct: 235 CLSRKSTESLAAKLQANGYKAAAYHAGMHAEQRSKVQEDFINDTTPIICATIAFGMGIDK 294
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
+VR+VIH+++PK++EGY+QE GRAGRDG + +L+YSY+D ++++ I
Sbjct: 295 SNVRWVIHYNMPKNLEGYYQEIGRAGRDGLPAHTLLFYSYADTLQLRQFI---------- 344
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
+ + + L RM Y E + CRR + + +FGE F S C CD
Sbjct: 345 ----------DGAKNADYQMAKLDRMQQYAEA-LSCRRKVLINYFGE-FLSEDC-GNCDI 391
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C+ ++ D T A+K++ V Q+ + +++V RGS N V ++ + +GA
Sbjct: 392 CNSPPAYF--DGTVLAQKVLSGVARMQQKEAMGTVIDVLRGSQNAQVYDKGYQEIKTYGA 449
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
K + + + + L+ + L ++S L+ VL
Sbjct: 450 AKDVPWRDLQQYIVQLINQGLLEIRFRES----------------GRLLLTPLAKEVLYD 493
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
I KL+K P ++ P +P+ L+ LR LR+ L
Sbjct: 494 GKNIQLAKLTKVKTEPV-----------TKERKPKKPK--------GTLFEKLRELRSEL 534
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
++A V AY +F + +L+ + + P T+++ L+I G+G+AK+ KYG ++ I+ ++
Sbjct: 535 ARDA--NVAAYIVFSDTSLKDMEDQEPVTQKQFLDIQGVGQAKMEKYGADFIKVIKEHVQ 592
Query: 1025 E 1025
+
Sbjct: 593 K 593
>gi|414079433|ref|YP_007000857.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
gi|413972712|gb|AFW96800.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
Length = 729
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 227/658 (34%), Positives = 354/658 (53%), Gaps = 76/658 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRP QR+II + D+ V+MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 7 LEKALKHHFGYDQFRPGQRQIIEDALENRDLMVVMPTGGGKSLCFQLPALLKPGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L NI ATFL+ ++ + + RE K KLLYV PE++ S+
Sbjct: 67 PLIALMQDQVEALRTNNISATFLNSSLNAYKVRS--REEAIMNGKIKLLYVAPERLV-SE 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ + + ++ IDEAHCVS+WGHDFRP+Y+ L +L++++P+ P +ALTATAT
Sbjct: 124 RFLPLLDVVKEKVGISTFAIDEAHCVSEWGHDFRPEYRQLRLLRKRYPDVPTIALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEK-----VAERLQV-----GLSYGHFFL 610
V+ D+++ LGL I SFNR NL + AE L++ G +
Sbjct: 184 DRVRADIIEQLGLKQPSIHIASFNRQNLHYEVRSKSNRAYAELLEIVRENEGSGIIYCLT 243
Query: 611 LKEFYVVSLECGHKAAF---YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
K+ ++L+ + YH + +R+ Q ++ +D++ ++ ATVAFGMGINKPDV
Sbjct: 244 RKKVDEITLKLQNDKVSVLPYHAGLSDEERSKNQTRFIRDDVRVMVATVAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H LP+++E Y+QE GRAGRD + S C L+++Y D ++ I+Q Q
Sbjct: 304 RFVVHSDLPRNLESYYQESGRAGRDDEPSKCTLFFNYGDIKTIEWSINQKPDPQEQLIA- 362
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ L +++ Y E DCRR +QL +FGE+F +C CDNC
Sbjct: 363 ----------------KQQLRQVIDYAEG-TDCRRTIQLSYFGERF-PGNC-GNCDNCLY 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K +D T A K + V +++ HI+++ RG+ NQ + ++H+ LS +G GK
Sbjct: 404 PKPV--QDWTIEAMKFLSCVARCKERYGMLHIIDILRGAKNQRIVVNKHDQLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E R+L ++ L+E+ +D Y S+LK+N + + ++ ++ V + P A
Sbjct: 462 KTVDEW-RMLGRSLLHQGLIEQT--ADGY----SILKLN-ALSWEVMRKQRPVSIAVPIA 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
T + +V A +L K LR LR L E
Sbjct: 514 -KKTTWEEENVKAADVEVLMQK---------------------------LRSLRKELADE 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ V Y IF ++TL+ +++ P+T +E ++G+G K+S+YG R L I+ +E
Sbjct: 546 --QAVPPYVIFHDSTLKLMAQSQPKTLDEFGNLSGVGSHKLSQYGERFLAEIQKYRQE 601
>gi|114564972|ref|YP_752486.1| ATP-dependent DNA helicase RecQ [Shewanella frigidimarina NCIMB 400]
gi|114336265|gb|ABI73647.1| ATP-dependent DNA helicase RecQ [Shewanella frigidimarina NCIMB 400]
Length = 615
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 213/656 (32%), Positives = 343/656 (52%), Gaps = 86/656 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L A+ ++VFG +FR QRE+I ++ G D V+MPTGGGKS+ YQLPA++ PG+T+V+S
Sbjct: 22 LAASLQQVFGYRAFREGQREVIEQSLQGQDTLVIMPTGGGKSMCYQLPAIVLPGVTVVVS 81
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL+SL++DQ+ LLQ+ + A +L+ ++ + E+LR+L+S + KLLYV+PE++ + D
Sbjct: 82 PLISLMKDQVDSLLQSGVSAAYLNSSLPREQSAEVLRKLHSG--EIKLLYVSPERLLRPD 139
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ R L+S++ ++ +DEAHC+SQWGHDFRP+Y LG LK+ FP P++ALTATA
Sbjct: 140 FIER-LQSVD----VSMFAVDEAHCISQWGHDFRPEYAALGQLKEYFPYLPLMALTATAD 194
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSLE 620
+ + + + LG+ + SF+RPN+ VAE+L F ++ +
Sbjct: 195 HATRLSICERLGVTPYTLL-SSFDRPNIRY---TVAEKLNAANQLRQFLTIQNGTSGIVY 250
Query: 621 C----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
C G A YH + R VQ ++ KD+++I+ ATVAFGMGINK
Sbjct: 251 CSSRRRVDEVAERLRLQGFNAQAYHAGLSQEDRGNVQDKFLKDQVDIVVATVAFGMGINK 310
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
+VRFV+H+ +PKSIE Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 311 SNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAYMLFDPADIGRVRHLIEQS------- 363
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
PG + + L M ++ E CRR + L +F E K C N
Sbjct: 364 EPGPQQ----------QVEFHKLHTMAAFAEAQT-CRRQVLLNYFDEV-----ASKPCGN 407
Query: 785 CSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHG 843
C ++ D T+ A+K++ + Q+F H++EV RGS + H+ LS G
Sbjct: 408 CDICLDPPKRYDGTEDAQKVLSCIYRLQQRFGIHHVIEVLRGSKAANIVDRGHDKLSTWG 467
Query: 844 AGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
GK + ++R L+ + +++ + S +K+N
Sbjct: 468 IGKDKSTEFWLSVIRQLIHLGLMSQDITR-------GSAIKLN----------------- 503
Query: 904 FPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
P+A + A+ SL+ + D +P KL++ L++LR
Sbjct: 504 -PAA--------RPILKAELSLMLAEPRIQLIDVKRKPNGRAPQQYDRKLFARLKLLRRE 554
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
L ++ + Y +F +ATL + +P + E+L +NG+G+ K+ ++G L+ I
Sbjct: 555 LAEK--NDIPPYLVFNDATLAEMCAMLPTSPGEMLAVNGVGQIKLDRFGGEFLDEI 608
>gi|397663426|ref|YP_006504964.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
gi|395126837|emb|CCD05020.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
Length = 608
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 227/649 (34%), Positives = 347/649 (53%), Gaps = 81/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFRP Q +II +SG DV VLMPTGGGKSL YQ+PA++ PG+ +V+SPL++L
Sbjct: 19 KKYFGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRPGVGIVVSPLIAL 78
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A + + ++ E + +L +L+ + + LLY+ PE++ + L R
Sbjct: 79 MEDQVTALKLQGIRAAYYNSSLTAEEARNVLNQLHHN--ELDLLYIAPERLISTSFLDRL 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E ++ IDEAHC+SQWGHDFRP+Y LG+LK FP+ P++ALTATA +E
Sbjct: 137 SECT-----ISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIALTATADKQTRE 191
Query: 566 DVVQALGLVNCIIFRQSFNRPNL------------WMDCEKVAERLQVGLSY-GHFFLLK 612
D+V L + SFNRPN+ ++ ++ Q G+ Y G ++
Sbjct: 192 DIVTKLN-YQPKKYVVSFNRPNIHYKVVPKTNAVKQLNLFLQSDTQQSGIIYCGTRHTVE 250
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E G KA YH + A+R VQ + D I+I+ AT+AFGMGI+KP+VRFV+H
Sbjct: 251 HLTAKLQELGFKARAYHAGLPHAERREVQNLFRYDRIDIVVATIAFGMGIDKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H LPKSIEGY+QE GRAGRDG + +L Y +D R++ I N
Sbjct: 311 HDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWI----------------MN 354
Query: 733 VA-NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ + R +ETN N M+++ E CRR + L +F E C K CD C
Sbjct: 355 IPLDEQRHIETNKLN--HMLAFAEAS-HCRRQILLRYFDEP-SHTEC-KNCDVCDNPPQ- 408
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A+K + + Q + +H ++V RGSL++ +K+ HE LS G GK + +
Sbjct: 409 -TADATEDAQKFLSCIYRLKQSYGLTHTIDVLRGSLSEKIKQSGHEHLSTFGIGKDKSAN 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP-SAINS 910
+ L+ +D+ ++++ + VL++ KA L+ G +++ L P + +NS
Sbjct: 468 YWKHLAWQLIHKDYCLQDMNHFN-------VLRLT-PKAIPLLKGEESISLTIPNNDLNS 519
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+K GK +PS +P+ S L+ LR LR L E E
Sbjct: 520 SK-------------KKGKQNPS-----FKPE-------SNPLFEKLRALRRQLADE--E 552
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ IF +ATL ++ P+ ++LL ++G+G+ K+++YG LE +
Sbjct: 553 NKPPFMIFSDATLHEMAHLKPKNSKQLLNVSGVGQHKLARYGHYFLEAL 601
>gi|443695320|gb|ELT96261.1| hypothetical protein CAPTEDRAFT_131881 [Capitella teleta]
Length = 570
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/528 (37%), Positives = 287/528 (54%), Gaps = 57/528 (10%)
Query: 362 IEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGK 421
++ S DQ D W+K+L VFG RP Q +N T+S + ++MPTGGGK
Sbjct: 65 LQSSTDQ-LDRQDHLWSKELSEKQSSVFGISDLRPLQLSTMNLTLSNKNCILVMPTGGGK 123
Query: 422 SLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS 481
SL +QLPAL+ G+TLVISPLVSL++DQ+ L NI A L+ + + + E+ S
Sbjct: 124 SLCFQLPALLSKGVTLVISPLVSLMEDQLFALENLNISAAMLNASSTKEHVKFVHSEMTS 183
Query: 482 DYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLG 541
+LLYVTPEK+AKS + LE + + LAR IDE HC SQWGHDFRPDY+ LG
Sbjct: 184 TKSDLRLLYVTPEKLAKSKRFMSYLEKMYTQNRLARFAIDEVHCCSQWGHDFRPDYKFLG 243
Query: 542 ILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD---------- 591
ILK++FP P+L LTATAT+SV DV + L + +C+I + SFNR NL+ +
Sbjct: 244 ILKRQFPKAPILGLTATATSSVLNDVKKILQIPDCVILKASFNRANLFYEVRPKPSNAHA 303
Query: 592 -CEKVAERLQV------GLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQ 643
E++ + +Q G+ Y E L+ G AA YH +D R+ ++
Sbjct: 304 LVEEIVDLIQTRFRDQSGIVYCLTQKDSEEMARQLQSHGLTAACYHAQMDAKHRSLAHRK 363
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
W+ ++I ++ AT+AFGMGI+KP+VRFVIHH++ KS+E Y+QE GRAGRD Q + C+++
Sbjct: 364 WTTNKIQVVVATIAFGMGIDKPNVRFVIHHTISKSMENYYQESGRAGRDDQTAHCIVFRG 423
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
++D R M+ +EQ T E L M+ Y + CRR
Sbjct: 424 FADLFRQSTMV---FSEQ--------------------TGQEKLYSMLDYVNDLSTCRRA 460
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTG--QQFSSSHILE 821
L HFGE + S+ C++ CDNC + S + AK L+ ++ T Q+++ +L+
Sbjct: 461 LIARHFGETWKSSDCQEKCDNCQRKTSVTSFNCYSFAKNLINILSKTSKIQRYTGLKLLD 520
Query: 822 VFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
+ K E K L++S+ I+ L+ +L E+
Sbjct: 521 AWMAQ-----KPCLQE--------KKLSRSQCEMIIMQLITNGYLKED 555
>gi|425064148|ref|ZP_18467273.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida X73]
gi|404381741|gb|EJZ78209.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida X73]
Length = 632
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 223/649 (34%), Positives = 351/649 (54%), Gaps = 82/649 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q E+I+AT+ G D V+M TG GKSL YQ+PAL G+TLVISPL+SL++
Sbjct: 33 VFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMK 92
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL I A +L+ + +TEQQ++ +L S KLLYV+PEKV +
Sbjct: 93 DQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSG--TLKLLYVSPEKVMTTSFF----- 145
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L + ++ + IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++D+
Sbjct: 146 HLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATADHATRQDI 205
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEFY 615
++ L L + ++ SF+RPN+ + EK + ++ + G+ Y + E
Sbjct: 206 LRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPIEQLCRFVLGQKGKSGIIYCNSRSKVERI 265
Query: 616 VVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
SL G A YH ++ AQR VQ+ + +D + ++ AT+AFGMGINK +VRFV+H
Sbjct: 266 AESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFD 325
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--RFN 732
LP+SIE Y+QE GRAGRD + VL+Y +D+ + ++ + P +P
Sbjct: 326 LPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILL-----EKPESPQRQIEALK 380
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ G E+ T CRRL+ L +FGE H +K C NC +
Sbjct: 381 LQAIGEFAESQT---------------CRRLVLLNYFGE-----HQQKPCQNCDICLDPP 420
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K++ + GQ+F +++ V RG NQ +K ++HE LS++G GK +K
Sbjct: 421 KQYDGLIDAQKVMSTIYRIGQRFGVYYVIAVLRGLSNQKIKDNQHEQLSVYGIGKDKSKE 480
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V+ ++ L++ ++ A ++ G Q + L P
Sbjct: 481 HWQSVIRQLIHLGFIKQ------VFDHFNATLQLTEN-AKPILRGEQPLSLAMP------ 527
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ S L+ ++P R + Q + D L++ LR LR + + E
Sbjct: 528 ----------RISSLTSVVAPQRY---AMAQYDKD------LFARLRFLRKQIADK--EN 566
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ AY +F +ATLQ +++ P T+ E+L ING+G K ++ ++ I+
Sbjct: 567 IPAYIVFNDATLQEMAQYQPTTKAEMLAINGVGATKFERFAQPFMQIIQ 615
>gi|417951017|ref|ZP_12594128.1| ATP-dependent DNA helicase RecQ [Vibrio splendidus ATCC 33789]
gi|342805457|gb|EGU40720.1| ATP-dependent DNA helicase RecQ [Vibrio splendidus ATCC 33789]
Length = 612
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 223/654 (34%), Positives = 346/654 (52%), Gaps = 87/654 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q+E+I+ + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL++
Sbjct: 24 VFGYQSFRDGQQEVIDLAVQGRDSLVIMPTGGGKSLCYQIPALVREGLTLVISPLISLMK 83
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ +M + + +NS + K++YV+PE+V D + R L+
Sbjct: 84 DQVDQLKANGVAAECINSSMPRDQLLSVFNRMNSG--QLKMVYVSPERVLMRDFIER-LQ 140
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ FP+ P +ALTATA + ++D+
Sbjct: 141 GLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPYMALTATADDATRKDI 196
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
V L LV+ + SF+RPN+ + +V L+ G+ Y E
Sbjct: 197 VSRLQLVDPHTYLGSFDRPNIRYNLVEKHKPVSQVVRYLETQKGNCGIIYCGSRKKVEMV 256
Query: 616 VVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L C G +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 257 TEKL-CNNGIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHF 315
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ + +D ++ M+ + E+ P
Sbjct: 316 DIPRNIESYYQETGRAGRDGLPAEAMMLFDPADMGWLRRMLDE--KEEGPQK-------- 365
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 366 -------QVEMHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKQCGNCDICLDPPK 412
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T A+K + V Q F +++EV RG N V+ + H+ LS +G G+ +
Sbjct: 413 HF---DATQEAQKALSCVYRVNQSFGMGYVVEVMRGMQNIRVRDNGHDKLSTYGIGRDHS 469
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 470 HDYWISIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGEMSLELAVPRLDT 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +KSD +K N KL++ LR LR + E
Sbjct: 522 AVRNAKSDKLSSK-------------------------NYDKKLFAKLRKLRKSIADE-- 554
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+ I
Sbjct: 555 DGLPPYVVFSDATLIDMAEVLPTSYGEMLAVNGVGQRKLDKYADPFLDLIQEHI 608
>gi|419839751|ref|ZP_14363154.1| ATP-dependent DNA helicase RecQ [Haemophilus haemolyticus HK386]
gi|386909096|gb|EIJ73776.1| ATP-dependent DNA helicase RecQ [Haemophilus haemolyticus HK386]
Length = 619
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 224/651 (34%), Positives = 345/651 (52%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ + +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQRVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + +A IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSKVSFIA---IDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADYATRQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILTHLNLENPHRYIGSFDRPNIRYTLEEKYKPMEQLIRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAFRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H+ LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHDKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V G ++ L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VIGELNPTLQLTES-AKAILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQSVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|77552741|gb|ABA95538.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 556
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/481 (42%), Positives = 268/481 (55%), Gaps = 54/481 (11%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS F W + + VFG S+R NQREIINA MSG DV V+M GGGKSL YQLPA
Sbjct: 67 WSG-SFLWDSRADDVRFNVFGISSYRQNQREIINAIMSGRDVLVIMAAGGGKSLCYQLPA 125
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
++ GITLV+SPL+SLIQDQ+M L I A L+ ++ + + L+ + K+L
Sbjct: 126 VLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTTNKEVEKFVYKALDKGEGELKIL 185
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK++KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ LGILK +FP+
Sbjct: 186 YVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKVQFPS 245
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL------ 603
P++ALTATAT V+ D+++ L + C+ F + NRPNL+ KV E+ VG
Sbjct: 246 VPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLFY---KVFEKSPVGKVVIDEI 302
Query: 604 ------SYG-------HFFLLKEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKD 647
SY + F KE V+ E + A +YH +D R V +WSK
Sbjct: 303 ANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYHADMDVISREKVHMRWSKS 362
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LYY D
Sbjct: 363 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYRPGDV 422
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
R M+ N G +NL +V YC++ CRR
Sbjct: 423 PRQSSMVF-----------------YENCG------LQNLYDIVRYCQSKRSCRRGAFFR 459
Query: 768 HFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVEL---VKLTGQQFSSSHILEVFR 824
HFGE + C CDNC+ E D T K +V L ++L Q+ + +++ F+
Sbjct: 460 HFGEA--AQDCNGMCDNCTSSLELKEIDATHHTKIIVSLLHDIQLNDQRATLLQLVDKFK 517
Query: 825 G 825
Sbjct: 518 A 518
>gi|148978460|ref|ZP_01814934.1| ATP-dependent DNA helicase RecQ [Vibrionales bacterium SWAT-3]
gi|145962367|gb|EDK27647.1| ATP-dependent DNA helicase RecQ [Vibrionales bacterium SWAT-3]
Length = 612
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 223/654 (34%), Positives = 346/654 (52%), Gaps = 87/654 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q+E+I+ + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL++
Sbjct: 24 VFGYQSFRDGQQEVIDLAVQGRDSLVIMPTGGGKSLCYQIPALVREGLTLVISPLISLMK 83
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ +M + + +NS + K++YV+PE+V D + R L+
Sbjct: 84 DQVDQLKANGVAAECINSSMPRDQLLSVFNRMNSG--QLKMVYVSPERVLMRDFIER-LQ 140
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ FP+ P +ALTATA + ++D+
Sbjct: 141 GLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPYMALTATADDATRKDI 196
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
V L LV+ + SF+RPN+ + +V L+ G+ Y E
Sbjct: 197 VSRLQLVDPHTYLGSFDRPNIRYNLVEKHKPVSQVVRYLETQKGNCGIIYCGSRKKVEMV 256
Query: 616 VVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L C G +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 257 TEKL-CNNGIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHF 315
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ + +D ++ M+ + E+ P
Sbjct: 316 DIPRNIESYYQETGRAGRDGLPAEAMMLFDPADMGWLRRMLDE--KEEGPQK-------- 365
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 366 -------QVEMHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKQCGNCDICLDPPK 412
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T A+K + V Q F +++EV RG N V+ + H+ LS +G G+ +
Sbjct: 413 HF---DATQEAQKALSCVYRVNQSFGMGYVVEVMRGMQNIRVRDNGHDKLSTYGIGRDHS 469
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 470 HDYWISIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGEMSLELAVPRLDT 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +KSD +K N KL++ LR LR + E
Sbjct: 522 AVRNAKSDKLSSK-------------------------NYDKKLFAKLRKLRKSIADE-- 554
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+ I
Sbjct: 555 DGLPPYVVFSDATLIDMAEVLPTSYGEMLAVNGVGQRKLDKYADPFLDLIQEHI 608
>gi|395804511|ref|ZP_10483749.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
gi|395433398|gb|EJF99353.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
Length = 768
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 222/652 (34%), Positives = 342/652 (52%), Gaps = 83/652 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L A K+ FG FRPNQ IIN +SG D +MPTGGGKS+ +QLPALI PGIT+VIS
Sbjct: 6 LHATLKENFGFEKFRPNQETIINTILSGQDALAIMPTGGGKSICFQLPALILPGITIVIS 65
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L++DQ+ L I A +++ EQQ + L S++ +KL+YV PE ++ D
Sbjct: 66 PLIALMKDQVDSLKTNGISACYINSTQSSQEQQYYIDNLKSNH--FKLVYVAPESLSYLD 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ +L ++ I IDEAHC+S WGHDFRP Y LG LK +FP+TP+LALTATA
Sbjct: 124 MAFSELN-------ISLIAIDEAHCISSWGHDFRPAYTNLGYLKSRFPSTPILALTATAD 176
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLK 612
+ + D+ + L L N F SF+R NL ++ +R++ + + G + L
Sbjct: 177 KATRTDISKQLNLKNPKTFIASFDRKNLSLEVRPALDRVKQIIDFIENKPNESGIIYCLS 236
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
L + G +A YH +D RA Q Q+ D+ ++CAT+AFGMGI+K +V
Sbjct: 237 RKATEELAEKLRKNGIEAKAYHAGLDNETRAKTQDQFINDDCQVVCATIAFGMGIDKSNV 296
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
R+VIH++LPK+IEGY+QE GRAGRDG + VL+ SY+D I+++ S+G+
Sbjct: 297 RWVIHYNLPKNIEGYYQEIGRAGRDGLPAETVLFESYADVIQLQKFASEGL--------- 347
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
NS + L RM Y + V CRR + L +FGE + +C CD C
Sbjct: 348 -------NS----DIQLAKLDRMKQYADA-VSCRRKILLSYFGE-LVTENC-GNCDICKN 393
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+F + + K L +V+L + + I++ RGS N Y+ + ++ L +G G
Sbjct: 394 PPTFFDGTIL-AQKALSAIVRLKESE-PLAVIVDFLRGSRNAYIYEKNYQELKTYGIGAD 451
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
++ + ++ L L+ + ++ + + + L G + ++ +
Sbjct: 452 VSWYDWNQYLIQLI-------NLGYCEIAFHQHNKILLTPFAKKVLFEGEK---VKLTTV 501
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ T + KS+ AK P +N L+ +LR LR + +E
Sbjct: 502 VKKT-IDKSEAKEAK---------------PKASKNS--------LFETLRKLRFEIAQE 537
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E V AY IF +A+L+ + P ++EE L + G+GKAK+ KYG ++ I
Sbjct: 538 --EEVPAYVIFSDASLRQMEILRPMSDEEFLAVEGVGKAKLEKYGADFIKAI 587
>gi|238798601|ref|ZP_04642077.1| ATP-dependent DNA helicase recQ [Yersinia mollaretii ATCC 43969]
gi|238717557|gb|EEQ09397.1| ATP-dependent DNA helicase recQ [Yersinia mollaretii ATCC 43969]
Length = 610
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 222/657 (33%), Positives = 343/657 (52%), Gaps = 88/657 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 78 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVM-----DGCRSGQIKLLYIAPERLVM-ESF 131
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FPN PV+ALTATA +
Sbjct: 132 LDQLHQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPNLPVIALTATADEA 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+V+ L L +I SF+RPN LW + +R + G+ Y +
Sbjct: 188 TRGDIVRLLNLDQPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 245
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + VL Y +D ++ + E+ P
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL-----EEKP---- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+G + L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 --------AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQSCGNCDI 402
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 403 CLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREFGHDKLSVYGLGR 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +LR L+ L + + + S L++ ++ A ++ + L P
Sbjct: 463 EQSHEHWVSVLRQLIHLGLLSQNIAQ-------FSALQLTEA-ARPVLRAELPLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K+ S + G N KL++ LR LR +
Sbjct: 515 -IQSLKVRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIAD 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F + TL +++++P T ELL + G+G+ K+ ++G + I +
Sbjct: 551 EG--NIPPYVVFNDTTLLEMAEQMPITASELLSVTGVGQRKLERFGAPFMAMIRDHV 605
>gi|225450636|ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Vitis
vinifera]
Length = 602
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/430 (45%), Positives = 253/430 (58%), Gaps = 41/430 (9%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
E N +FGN +FRP Q + A+++ D FVLMPTGGGKSL YQLPA + PG+T+V+
Sbjct: 190 FELANVVIFGNRTFRPLQHQACKASVTKRDCFVLMPTGGGKSLCYQLPATLQPGVTVVVC 249
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L IPATFLS ++ +L+EL D KLLYVTPE++A +
Sbjct: 250 PLLSLIQDQIITLNLNFGIPATFLSSQQTASQAAAVLKELRKDKPSCKLLYVTPERIAGN 309
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L+SL+ + LA V+DEAHCVSQWGHDFRPDY+ LG LKQ FP+ PV+ALTATA
Sbjct: 310 STFFEILKSLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPDVPVMALTATA 369
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERL-QVGLSYGHFF--LLKEFY 615
T V++D++ +L + + ++ SF+R NL + K E L Q+G F L Y
Sbjct: 370 TQPVRKDILNSLRIPHALVLETSFDRSNLKYEVIGKTKEPLKQLGQLLKDRFKNLCGIVY 429
Query: 616 VVSL------------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
+S +C K +YH + QR VQK+W +++IICAT+AFGMGIN
Sbjct: 430 CLSKSECAEVSKFLNGKCKIKTVYYHAGLSARQRIDVQKKWHTGKVHIICATIAFGMGIN 489
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFVIH+++ KSIE Y+QE GRAGRD + C+ Y DF RV M+ G +S
Sbjct: 490 KPNVRFVIHNTMSKSIENYYQESGRAGRDDLPAVCMALYQKKDFSRVVCMLRNGHGCKS- 548
Query: 724 FTPGHNRFNVANSGRVLETNTENLL---RMVSYCENDVDCRRLLQLVHFGEKFDSAHCK- 779
ET E + +M YCE +CRR L HFGE D CK
Sbjct: 549 -----------------ETFKEAMTQARKMQQYCELKTECRRQTLLEHFGESLDRKACKN 591
Query: 780 --KTCDNCSK 787
CDNC K
Sbjct: 592 GCNPCDNCLK 601
>gi|424775779|ref|ZP_18202769.1| ATP-dependent DNA helicase [Alcaligenes sp. HPC1271]
gi|422888879|gb|EKU31261.1| ATP-dependent DNA helicase [Alcaligenes sp. HPC1271]
Length = 608
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 228/658 (34%), Positives = 336/658 (51%), Gaps = 87/658 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG SFR +Q EII + G D VLMPTGGGKSL YQ+PAL+ G +V+SPL++L
Sbjct: 10 QEVFGYDSFRGSQHEIIETLIQGGDALVLMPTGGGKSLCYQIPALVRTGTGVVVSPLIAL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L + + A +L+ +W +E+ RE + + LLYV PE++ L
Sbjct: 70 MQDQVDALNELGVNAAYLNSTQDWQTAREVEREFLTG--QLDLLYVAPERLLTDRCL--- 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L AR ++ IDEAHCVSQWGHDFRP+Y GL +L Q++P P +ALTATAT +
Sbjct: 125 --DLLARGQISLFAIDEAHCVSQWGHDFRPEYLGLDLLAQRWPGVPRVALTATATQLTRV 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVG---LSY---------GHFFLLKE 613
++ Q L L + F SF+RPN+ C ++ E+ +V LS+ G + L
Sbjct: 183 EIAQRLKLEDARHFVASFDRPNI---CYRIIEKNEVRKQLLSFIQEEHSGDAGIVYCLSR 239
Query: 614 FYV---VSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
V C G A YH +D QRA Q ++ ++E ++ AT+AFGMG+NKPDVR
Sbjct: 240 SRVEDTAEFLCKNGIHALPYHAGLDAQQRAINQARFLREEGVVMVATIAFGMGVNKPDVR 299
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV H LPKS+EGY+QE GRAGRDG+ ++ L Y D +++ MI+ QS H
Sbjct: 300 FVAHIDLPKSVEGYYQETGRAGRDGEAATAWLAYGLQDVVQLHRMIN-----QSQGDAAH 354
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
R G+ L+ M+ CE + CRR L +F ++ + C NC
Sbjct: 355 RR----QQGQALDA-------MLGLCET-ISCRRQRLLAYFDQQIEP------CGNCDTC 396
Query: 789 KSFIEK-DVTDTAKKLV----ELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHG 843
E D T A+K++ L + GQ+F + H++++ G L VK+H H+ L++ G
Sbjct: 397 LEAPEAWDGTVAAQKMLSTIYRLWRERGQRFGAGHLIDILLGKLTDRVKEHEHDKLTVFG 456
Query: 844 AGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQS-KAHNLIIGRQNVVL 902
GK L +LR L+ + + + YG++ + K ++ R+ V
Sbjct: 457 VGKDLTDQAWRGVLRQLLAHSLVTVD---PEGYGTLLLTEASREVLKGERTLMLRRETVT 513
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
R P+A + P+ P E D + + +LR R
Sbjct: 514 RGPAA-----------------------HRVKGQAPAGPALEPD---QQRRFEALRAWRA 547
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+E GV AY IF +ATL+ ++ R P +E +L I GIG K YG LL ++
Sbjct: 548 ATARE--HGVPAYVIFHDATLREVAIRCPSSEADLEPITGIGVRKREAYGEALLRCVQ 603
>gi|194332913|ref|YP_002014773.1| ATP-dependent DNA helicase RecQ [Prosthecochloris aestuarii DSM 271]
gi|194310731|gb|ACF45126.1| ATP-dependent DNA helicase RecQ [Prosthecochloris aestuarii DSM 271]
Length = 617
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 222/647 (34%), Positives = 344/647 (53%), Gaps = 80/647 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
KVFG ++FRPNQ E++ A +SG D F +MPTGGGKSL YQLPA++ G +VISPL++L+
Sbjct: 20 KVFGFNAFRPNQGEVVQAILSGRDAFAVMPTGGGKSLCYQLPAVVMEGTCVVISPLIALM 79
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ I A +L+ ++ EQ ++ EL S+ + LLYV PE+ + L
Sbjct: 80 KDQVDGARVNGIRAAYLNSSLSPDEQSLVMSELTSN--RLDLLYVAPERFS-----LEHF 132
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
+++ ++ VIDEAHC+S+WGHDFRPDY L L + FP+ PV A TATAT V+ D
Sbjct: 133 QTVLKEVKISMAVIDEAHCISEWGHDFRPDYLSLSALVELFPDVPVAAFTATATHKVQAD 192
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMDC---EKVAERLQVGL---SYGHFFLL--------K 612
+++ LGL + + R SF+RPNL D + V+E+L VGL S G ++
Sbjct: 193 ILRKLGLRDPFVVRASFDRPNLTYDVRFKDNVSEQL-VGLLKSSPGKAGIIYRTSRKSVN 251
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E + G +A YH + +R Q+ + +DE ++I ATVAFGMGI+K ++RFVIH
Sbjct: 252 ETTAMLQAKGFRALPYHAGLGDEERKKNQETFIRDEADVIVATVAFGMGIDKSNIRFVIH 311
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKSIE Y+QE GRAGRDG+ + C L +S D +V+ I + E
Sbjct: 312 ADLPKSIENYYQETGRAGRDGEPAHCTLLFSQGDIPKVRFFIDTIIDE------------ 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L+ L R+VS+ V CRR+ L +FGE + +C +CD C +
Sbjct: 360 -TERNKALDA----LQRVVSFASTSV-CRRITLLDYFGESYPKENC-GSCDICLGTREV- 411
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+ L+ + T +F ++HI+++ GS N+ + + H+ L +G GK K
Sbjct: 412 -TDCTREAQMLLSAIARTEGRFGATHIIDIVMGSKNKKILELGHDRLKTYGVGKEKNK-- 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ RHL+ E + + K++ G ++ + QS P +
Sbjct: 469 --KFWRHLIDELLAQKMIAKAE--GLYPTLYLLEQS---------------VPVLKGEAR 509
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
L V K +P PS+ D + +L+ LR LR L E + +
Sbjct: 510 LEMVRVIEKK--------TPK----PSRTMEHGDYD--HELFEQLRTLRKQLADE--QDI 553
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
Y +F + +L+ ++ +P+ +E +LE++G+G+ K+ +YG L+ I
Sbjct: 554 PPYIVFSDRSLRDMAALLPKDDETMLEVSGVGEVKLERYGRIFLDWI 600
>gi|22124312|ref|NP_667735.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM10+]
gi|45442967|ref|NP_994506.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Microtus str.
91001]
gi|51594557|ref|YP_068748.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
32953]
gi|108806187|ref|YP_650103.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Antiqua]
gi|108810297|ref|YP_646064.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Nepal516]
gi|145600700|ref|YP_001164776.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Pestoides F]
gi|153947607|ref|YP_001399215.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
31758]
gi|153997111|ref|ZP_02022244.1| ATP-dependent DNA helicase [Yersinia pestis CA88-4125]
gi|162418857|ref|YP_001605148.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Angola]
gi|165926240|ref|ZP_02222072.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939115|ref|ZP_02227666.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011675|ref|ZP_02232573.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213635|ref|ZP_02239670.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401854|ref|ZP_02307342.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421077|ref|ZP_02312830.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426281|ref|ZP_02318034.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469646|ref|ZP_02334350.1| ATP-dependent DNA helicase RecQ [Yersinia pestis FV-1]
gi|218930836|ref|YP_002348711.1| ATP-dependent DNA helicase RecQ [Yersinia pestis CO92]
gi|229837162|ref|ZP_04457327.1| ATP-dependent DNA helicase [Yersinia pestis Pestoides A]
gi|229839522|ref|ZP_04459681.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229900085|ref|ZP_04515222.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229900469|ref|ZP_04515598.1| ATP-dependent DNA helicase [Yersinia pestis Nepal516]
gi|270488824|ref|ZP_06205898.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM D27]
gi|294505497|ref|YP_003569559.1| ATP-dependent DNA helicase [Yersinia pestis Z176003]
gi|384123966|ref|YP_005506586.1| ATP-dependent DNA helicase [Yersinia pestis D106004]
gi|384127827|ref|YP_005510441.1| ATP-dependent DNA helicase [Yersinia pestis D182038]
gi|384138308|ref|YP_005521010.1| ATP-dependent DNA helicase RecQ [Yersinia pestis A1122]
gi|384413065|ref|YP_005622427.1| ATP-dependent DNA helicase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420549046|ref|ZP_15046797.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-01]
gi|420554379|ref|ZP_15051553.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-02]
gi|420560006|ref|ZP_15056434.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-03]
gi|420565382|ref|ZP_15061272.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-04]
gi|420581390|ref|ZP_15075799.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-07]
gi|420586787|ref|ZP_15080681.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-08]
gi|420591869|ref|ZP_15085252.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-09]
gi|420597248|ref|ZP_15090090.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-10]
gi|420602944|ref|ZP_15095145.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-11]
gi|420608335|ref|ZP_15100039.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-12]
gi|420613725|ref|ZP_15104865.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-13]
gi|420619086|ref|ZP_15109540.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-14]
gi|420624397|ref|ZP_15114328.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-15]
gi|420629378|ref|ZP_15118846.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-16]
gi|420639815|ref|ZP_15128223.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-25]
gi|420645253|ref|ZP_15133196.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-29]
gi|420650581|ref|ZP_15137995.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-32]
gi|420661646|ref|ZP_15147913.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-36]
gi|420666997|ref|ZP_15152736.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-42]
gi|420671856|ref|ZP_15157169.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-45]
gi|420682761|ref|ZP_15167043.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-47]
gi|420688171|ref|ZP_15171857.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-48]
gi|420693441|ref|ZP_15176465.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-52]
gi|420699163|ref|ZP_15181511.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-53]
gi|420705063|ref|ZP_15186161.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-54]
gi|420710327|ref|ZP_15190893.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-55]
gi|420721372|ref|ZP_15200506.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-58]
gi|420726804|ref|ZP_15205306.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-59]
gi|420732302|ref|ZP_15210251.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-60]
gi|420737293|ref|ZP_15214760.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-61]
gi|420742774|ref|ZP_15219685.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-63]
gi|420753919|ref|ZP_15229361.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-65]
gi|420765089|ref|ZP_15238752.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-71]
gi|420780906|ref|ZP_15252870.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-88]
gi|420797138|ref|ZP_15267335.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-91]
gi|420802233|ref|ZP_15271911.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-92]
gi|420812973|ref|ZP_15281585.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-94]
gi|420818445|ref|ZP_15286557.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-95]
gi|420823785|ref|ZP_15291325.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-96]
gi|420828848|ref|ZP_15295891.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-98]
gi|420834430|ref|ZP_15300927.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-99]
gi|420839377|ref|ZP_15305399.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-100]
gi|420844579|ref|ZP_15310118.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-101]
gi|420850225|ref|ZP_15315189.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-102]
gi|420855965|ref|ZP_15320020.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-103]
gi|420861052|ref|ZP_15324517.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-113]
gi|421765358|ref|ZP_16202143.1| ATP-dependent DNA helicase RecQ [Yersinia pestis INS]
gi|21957085|gb|AAM83986.1|AE013640_5 ATP-dependent DNA helicase [Yersinia pestis KIM10+]
gi|45437834|gb|AAS63383.1| ATP-dependent DNA helicase [Yersinia pestis biovar Microtus str.
91001]
gi|51587839|emb|CAH19442.1| ATP-dependent DNA helicase [Yersinia pseudotuberculosis IP 32953]
gi|108773945|gb|ABG16464.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Nepal516]
gi|108778100|gb|ABG12158.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Antiqua]
gi|115349447|emb|CAL22420.1| ATP-dependent DNA helicase [Yersinia pestis CO92]
gi|145212396|gb|ABP41803.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Pestoides F]
gi|149289417|gb|EDM39495.1| ATP-dependent DNA helicase [Yersinia pestis CA88-4125]
gi|152959102|gb|ABS46563.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
31758]
gi|162351672|gb|ABX85620.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Angola]
gi|165912888|gb|EDR31514.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921764|gb|EDR38961.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989444|gb|EDR41745.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205308|gb|EDR49788.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961206|gb|EDR57227.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048747|gb|EDR60155.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054800|gb|EDR64604.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229682488|gb|EEO78575.1| ATP-dependent DNA helicase [Yersinia pestis Nepal516]
gi|229686865|gb|EEO78944.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695888|gb|EEO85935.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229706105|gb|EEO92114.1| ATP-dependent DNA helicase [Yersinia pestis Pestoides A]
gi|262363562|gb|ACY60283.1| ATP-dependent DNA helicase [Yersinia pestis D106004]
gi|262367491|gb|ACY64048.1| ATP-dependent DNA helicase [Yersinia pestis D182038]
gi|270337328|gb|EFA48105.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM D27]
gi|294355956|gb|ADE66297.1| ATP-dependent DNA helicase [Yersinia pestis Z176003]
gi|320013569|gb|ADV97140.1| ATP-dependent DNA helicase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342853437|gb|AEL71990.1| ATP-dependent DNA helicase RecQ [Yersinia pestis A1122]
gi|391421158|gb|EIQ83878.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-01]
gi|391421371|gb|EIQ84073.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-02]
gi|391421448|gb|EIQ84143.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-03]
gi|391436188|gb|EIQ97169.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-04]
gi|391453252|gb|EIR12582.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-07]
gi|391453411|gb|EIR12729.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-08]
gi|391455260|gb|EIR14393.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-09]
gi|391469060|gb|EIR26879.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-10]
gi|391469818|gb|EIR27555.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-11]
gi|391471272|gb|EIR28850.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-12]
gi|391484954|gb|EIR41152.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-13]
gi|391486455|gb|EIR42485.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-15]
gi|391486548|gb|EIR42569.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-14]
gi|391501084|gb|EIR55520.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-16]
gi|391506158|gb|EIR60104.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-25]
gi|391517115|gb|EIR69950.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-29]
gi|391518917|gb|EIR71596.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-32]
gi|391531438|gb|EIR82932.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-36]
gi|391534305|gb|EIR85494.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-42]
gi|391536661|gb|EIR87623.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-45]
gi|391550077|gb|EIR99727.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-47]
gi|391550347|gb|EIR99969.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-48]
gi|391564613|gb|EIS12805.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-52]
gi|391566044|gb|EIS14081.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-53]
gi|391569386|gb|EIS16980.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-54]
gi|391579599|gb|EIS25700.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-55]
gi|391591637|gb|EIS36175.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-58]
gi|391595137|gb|EIS39212.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-60]
gi|391595868|gb|EIS39867.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-59]
gi|391609696|gb|EIS52066.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-61]
gi|391610048|gb|EIS52385.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-63]
gi|391623135|gb|EIS63973.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-65]
gi|391633409|gb|EIS72815.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-71]
gi|391648413|gb|EIS85930.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-88]
gi|391666018|gb|EIT01535.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-91]
gi|391675612|gb|EIT10109.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-92]
gi|391675850|gb|EIT10329.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-94]
gi|391689548|gb|EIT22669.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-95]
gi|391691498|gb|EIT24422.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-96]
gi|391693223|gb|EIT25990.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-98]
gi|391706602|gb|EIT38024.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-99]
gi|391707573|gb|EIT38908.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-100]
gi|391710357|gb|EIT41433.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-101]
gi|391722570|gb|EIT52360.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-102]
gi|391722697|gb|EIT52473.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-103]
gi|391723511|gb|EIT53184.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-113]
gi|411173338|gb|EKS43383.1| ATP-dependent DNA helicase RecQ [Yersinia pestis INS]
Length = 610
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 223/657 (33%), Positives = 343/657 (52%), Gaps = 88/657 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 78 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVM-----DGCRSGQIKLLYIAPERLVM-ESF 131
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA +
Sbjct: 132 LDQLYQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEA 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+V+ L L +I SF+RPN LW + +R + G+ Y +
Sbjct: 188 TRGDIVRLLNLDQPLIQISSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 245
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + VL Y +D ++ + E+ P
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL-----EEKP---- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+G + L M ++ E CRRL+ L +FGE ++ C NC
Sbjct: 357 --------AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQPCGNCDI 402
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 403 CLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREMGHDKLSVYGIGR 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+LR L+ L + + + S L++ ++ A ++ + L P
Sbjct: 463 EQTHEHWVSVLRQLIHLGLLSQNIAQ-------FSALQLTEA-ARPVLRAELPLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K+ S + G N KL++ LR LR +
Sbjct: 515 -IQSLKVRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIAD 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL +++++P T ELL +NG+G+ K+ ++G + I +
Sbjct: 551 EG--NIPPYVVFNDATLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMALIRDHV 605
>gi|307132960|ref|YP_003884976.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
gi|306530489|gb|ADN00420.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
Length = 614
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 219/650 (33%), Positives = 335/650 (51%), Gaps = 83/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q+ IINA +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 23 RETFGYQQFRPGQQAIINAAVSGRDCLVIMPTGGGKSLCYQIPALVLEGLTLVVSPLISL 82
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +QQ + + KLLY+ PE++ +D L Q
Sbjct: 83 MKDQVDQLQAYGVAAACLNSTQTREQQQAVFSACRRG--ELKLLYIAPERLT-TDGFLEQ 139
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N I IDEAHC+SQWGHDFRP+Y+ LG +KQ+ P P++ALTATA + ++
Sbjct: 140 LTHWNT----TLIAIDEAHCISQWGHDFRPEYRALGQIKQQLPALPIVALTATADETTRQ 195
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+ + L L + +I SF+RPN LW+ + +R + G+ Y +
Sbjct: 196 DIARLLDLRDPLINISSFDRPNIRYTLVEKFKPLDQLWLFVQ--GQRGKSGIVYCNSRAK 253
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G YH +D +R+ VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 254 VEDLCARLQNRGLSVGAYHAGLDNDRRSQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 313
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 314 VHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCL-----EEKP------- 361
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G L+ L M ++ E CRRL+ L +FGE A C NC
Sbjct: 362 -----AGVQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGENRQQA-----CGNCDVCLD 410
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + V GQ+F +I EV RG+ NQ +++ H+ L ++G GK
Sbjct: 411 PPRRYDGLVDAQKALSCVYRVGQRFGIGYIAEVLRGANNQRIREFGHDKLPVYGLGKDKT 470
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ + ILR L+ L + + S L++ +S A ++ G + L P I+
Sbjct: 471 QEQWVSILRQLIHLGLLAQNIAH-------HSALQLTES-ARPVLRGDVPLQLAVPRVIS 522
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K P Q N KL++ LR LR + E
Sbjct: 523 LSK-------------------------PRASQKTYGGNYDRKLFAKLRKLRKSIADE-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + Y +F +ATL +++ +P T ELL +NG+G+ K+ ++G + I
Sbjct: 556 DNIPPYVVFSDATLLEMAELLPVTASELLAVNGVGQRKLERFGTPFMTLI 605
>gi|90407207|ref|ZP_01215394.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
gi|90311630|gb|EAS39728.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
Length = 602
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 221/652 (33%), Positives = 344/652 (52%), Gaps = 92/652 (14%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG SFR Q+E+I +G D V+MPTGGGKSL +Q+PALI PGI +VISPL+SL++D
Sbjct: 17 FGYKSFRAGQKEVIEQLCAGKDALVVMPTGGGKSLCFQIPALIQPGICIVISPLISLMKD 76
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L + A +L+ ++ + +Q +IL +++ K KLLY+ PE++ + D + R L++
Sbjct: 77 QVDTLQTCGVAAAYLNSSLSYPQQNQILNDMHQG--KLKLLYIAPERLLRHDFMQR-LKT 133
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L + IDEAHC+SQWGHDFRP+Y LG LK FP P++ALTATA + ++D++
Sbjct: 134 LT----INLFAIDEAHCISQWGHDFRPEYALLGQLKIHFPQVPLVALTATADHATQKDIL 189
Query: 569 QALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKEFYV 616
L + ++ SF+RPN+ ++ EK +Q+ G+ Y E
Sbjct: 190 ARLQFNDPLLSIHSFDRPNIEYLLIEKYRPLIQLFNYLAEHQHESGIIYCTSRRRTEEIA 249
Query: 617 VSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 675
L+ G A YH ++ ++R VQ ++ KDE++I+ ATVAFGMGI+KP+VRFV+H+ +
Sbjct: 250 QKLQGKGLNARCYHAGLELSERQLVQDKFIKDEVDIVVATVAFGMGIDKPNVRFVVHYEI 309
Query: 676 PKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVAN 735
PK+IE Y+QE GRAGRDG + +L+Y +D RV+ M+ + E+
Sbjct: 310 PKNIESYYQETGRAGRDGLPAQAMLFYDPADPARVRAMLEKNENEEQ------------- 356
Query: 736 SGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEK- 794
R +E + N MV++ E CRR + L +FGE + + C NC ++
Sbjct: 357 --RRIELHKLN--TMVAFAEAQT-CRRQVLLNYFGE-----YSRNACGNCDICLDPPKRY 406
Query: 795 DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEAS 854
D + A+K++ V +GQ F HI+EV RG+ +K H+ LS++ G +
Sbjct: 407 DALEDARKVLSCVYRSGQNFGMHHIVEVLRGAKTARIKSLGHDKLSVYALGAEQSTEYWL 466
Query: 855 RILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLS 914
+LR L+ LM+ N T+ S
Sbjct: 467 SLLRQLIHCGLLMQ----------------------------------------NLTRGS 486
Query: 915 KSDVTPAKGSLLSG----KLSPSRNDTPSQPQNEVDLNLSA--KLYSSLRMLRTLLVKEA 968
+TPA +L +L+ R +N+ L+L++ KL++ LR LR +
Sbjct: 487 ALQLTPAARPILRAELPLQLAVPRLQMVKSSKNKKRLSLASDNKLFARLRQLRKQIADR- 545
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E Y IF + +L +S+ +P + E L I G+G+ K+ KYGV L+ I+
Sbjct: 546 -EDRAPYMIFSDVSLSEMSEIMPTNQSEFLNITGVGQIKLEKYGVEFLQIIK 596
>gi|242237700|ref|YP_002985881.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech703]
gi|242129757|gb|ACS84059.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech703]
Length = 607
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 218/650 (33%), Positives = 340/650 (52%), Gaps = 84/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q+ II+A +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RETFGYQQFRPGQQAIIHAAVSGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q ++ S + +LLY+ PE++ ++ L Q
Sbjct: 78 MKDQVDQLQAYGVSAACLNSTQTREQQMAVIAGCRSG--QIRLLYIAPERLT-NEGFLEQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
N + I IDEAHC+SQWGHDFRP+Y+ LG +KQ+FP PV+ALTATA + +
Sbjct: 135 FTGWNP----SLIAIDEAHCISQWGHDFRPEYRELGYIKQRFPQLPVVALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+++ LGL + ++ SF+RPN LW+ + +R + G+ Y +
Sbjct: 191 DIIRLLGLRDPLVQISSFDRPNIRYTLVEKFKPLDQLWLFVQ--GQRGKSGIIYCNSRAK 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDISARLQNRGLSVGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 309 VHFDIPRTIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ L+ L M ++ E CRRL+ L +FGE + ++ C NC
Sbjct: 357 -----ASAQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGE-----NRQQPCGNCDICLD 405
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D A+K + V GQ+F +I EV RG+ NQ +++ H+ L ++G GK
Sbjct: 406 PPKRYDGLVDAQKALSCVYRAGQRFGMGYIAEVLRGANNQRIREFGHDKLPVYGIGKDKT 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ + ILR L+ L + + + S L++ +S A ++ G + L P IN
Sbjct: 466 QEQWISILRQLIHLGLLTQNIIQ-------HSALQLTES-ARPVLRGEVPLQLAVPRTIN 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPRASQKSYGGNYDRKLFAKLRKLRKSIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + Y +F +ATL +++ +P T ELL ING+G+ K+ ++GV + I
Sbjct: 550 DNIPPYVVFSDATLLEMAEVMPVTPGELLNINGVGQRKLERFGVPFMTLI 599
>gi|170026209|ref|YP_001722714.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis YPIII]
gi|186893559|ref|YP_001870671.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis PB1/+]
gi|420570412|ref|ZP_15065845.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-05]
gi|420576075|ref|ZP_15070964.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-06]
gi|420634593|ref|ZP_15123519.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-19]
gi|420656190|ref|ZP_15143047.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-34]
gi|420677196|ref|ZP_15162026.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-46]
gi|420715828|ref|ZP_15195768.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-56]
gi|420748668|ref|ZP_15224634.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-64]
gi|420759919|ref|ZP_15234148.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-66]
gi|420770307|ref|ZP_15243422.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-72]
gi|420775288|ref|ZP_15247941.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-76]
gi|420786536|ref|ZP_15257793.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-89]
gi|420791561|ref|ZP_15262319.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-90]
gi|420807567|ref|ZP_15276750.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-93]
gi|169752743|gb|ACA70261.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis YPIII]
gi|186696585|gb|ACC87214.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis PB1/+]
gi|391437458|gb|EIQ98312.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-05]
gi|391441078|gb|EIR01593.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-06]
gi|391501167|gb|EIR55597.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-19]
gi|391518233|gb|EIR70963.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-34]
gi|391549862|gb|EIR99531.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-46]
gi|391581169|gb|EIS27080.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-56]
gi|391611365|gb|EIS53551.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-64]
gi|391626018|gb|EIS66438.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-66]
gi|391635100|gb|EIS74299.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-72]
gi|391645325|gb|EIS83215.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-76]
gi|391652808|gb|EIS89836.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-89]
gi|391658455|gb|EIS94858.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-90]
gi|391675277|gb|EIT09812.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-93]
Length = 597
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 342/654 (52%), Gaps = 82/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 5 RDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 64
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ + +Q ++ S + KLLY+ PE++ + L Q
Sbjct: 65 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSG--QIKLLYIAPERLVM-ESFLDQ 121
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA + +
Sbjct: 122 LYQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEATRG 177
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L +I SF+RPN LW + +R + G+ Y +
Sbjct: 178 DIVRLLNLDQPLIQISSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNSRAK 235
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 236 VEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFV 295
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + VL Y +D ++ + E+ P
Sbjct: 296 VHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL-----EEKP------- 343
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G + L M ++ E CRRL+ L +FGE ++ C NC
Sbjct: 344 -----AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQPCGNCDICLD 392
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 393 PPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREMGHDKLSVYGIGREQT 452
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+LR L+ L + + + S L++ ++ A ++ + L P I
Sbjct: 453 HEHWVSVLRQLIHLGLLSQNIAQ-------FSALQLTEA-ARPVLRAELPLQLAVPR-IQ 503
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
S K+ S + G N KL++ LR LR + E
Sbjct: 504 SLKVRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIADEG- 539
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++++P T ELL +NG+G+ K+ ++G + I +
Sbjct: 540 -NIPPYVVFNDATLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMALIRDHV 592
>gi|352085481|ref|ZP_08953101.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 2APBS1]
gi|351681902|gb|EHA65016.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 2APBS1]
Length = 612
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 239/662 (36%), Positives = 347/662 (52%), Gaps = 90/662 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+ ++ G D VLMPTGGGKSL YQ+PAL+ G +V+SPL++L
Sbjct: 13 QSVFGYPSFRGQQQAVVEHLGEGGDALVLMPTGGGKSLCYQIPALLRQGTGIVVSPLIAL 72
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L +A + A +L+ ++ Q+E+ R+L + + LLYV PE++ + L
Sbjct: 73 MQDQVDALREAGVAAAYLNSSLSAEAQREVERQLLAG--ELNLLYVAPERLL-TPRFLGL 129
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LES+ +A IDEAHCVSQWGHDFRP+Y+ L IL Q+FP+ P +ALTATA +E
Sbjct: 130 LESIE----VALFAIDEAHCVSQWGHDFRPEYRELAILHQRFPHAPRIALTATADPRTRE 185
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEF----------- 614
++V+ L L + F SF+RPN+ +VGL + L EF
Sbjct: 186 EIVERLSLQHARQFVSSFDRPNIGY---------RVGLRHNAKRQLTEFLQGHQGESGIV 236
Query: 615 YVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y +S E G +A YH +D A RA Q+++ +++ ++ ATVAFGMGI+
Sbjct: 237 YCLSRRKVDDTAAWLAESGVEALPYHAGLDAATRAKNQQRFLREDGVVMVATVAFGMGID 296
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVRFV H LP+SIEGY+QE GRAGRDG + + Y SD + + MI+Q +
Sbjct: 297 KPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTMSQMIAQSESAD-- 354
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
RV E+LL +Y E CRR L L FGE + C CD
Sbjct: 355 -----------ERKRVERQKLESLL---AYAEA-TGCRRQLLLGAFGEVYPGP-CGH-CD 397
Query: 784 NC-SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + K++ D T A+K + V TGQ++ S H+++V RG + V H LS
Sbjct: 398 NCLAPPKTW---DATVPAQKALSAVYRTGQRYGSGHVIDVLRGEETERVLALDHHRLSTF 454
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G L + + + R L+ L + ++ YG+ L++ + L GRQ + L
Sbjct: 455 GVGADLDEKQWRSVFRQLLAAGLLEAD---AEGYGT----LRLTAASRSVLSGGRQ-LKL 506
Query: 903 RFPSAINSTKLSKSD---VTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRM 959
R + + D VT KGS G L + +L+ +LR
Sbjct: 507 REDARPERASRRRRDSKLVTSDKGS--GGSLGIEAYEQ--------------ELWDALRA 550
Query: 960 LRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
LRT L K+ +GV Y +F +ATL + + +P E+EL I+G+G+AK+ +YG L I
Sbjct: 551 LRTQLAKQ--QGVPPYVVFHDATLLAMLRAMPANEDELATISGVGEAKLKRYGSDFLAVI 608
Query: 1020 ES 1021
+
Sbjct: 609 NA 610
>gi|343506824|ref|ZP_08744288.1| ATP-dependent DNA helicase RecQ [Vibrio ichthyoenteri ATCC 700023]
gi|342801358|gb|EGU36830.1| ATP-dependent DNA helicase RecQ [Vibrio ichthyoenteri ATCC 700023]
Length = 612
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 222/661 (33%), Positives = 339/661 (51%), Gaps = 93/661 (14%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q ++I A + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 22 EQVFGYQQFRSGQEQVIEAAIQGQDSLVIMPTGGGKSLCYQVPALVREGLTLVISPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ M + + +NS KL+YV+PE+V D + R
Sbjct: 82 MKDQVDQLKADGVAAECVNSTMSREDLISVYNRMNSG--ALKLVYVSPERVLMRDFIER- 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L+ L+ I +DEAHC+SQWGHDFRP+Y LG LK FP+ P +ALTATA + +
Sbjct: 139 LQGLS----LSMIAVDEAHCISQWGHDFRPEYASLGQLKHYFPHVPFMALTATADDATRN 194
Query: 566 DVVQALGLVNCIIFRQSFNRPNL----------------WMDCEKVAERLQVGLSYGHFF 609
D+V L LV+ + + SF+RPN+ ++D +K G+ Y
Sbjct: 195 DIVSRLQLVDPLNYLGSFDRPNIRYTLLEKHKPVSQIIRYLDTQKG----HCGIIYCGSR 250
Query: 610 LLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VR
Sbjct: 251 KKVEMVTEKLCNNHIRAASYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 310
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV H +P++IE Y+QE GRAGRDG + V+ Y +D ++ M+ +
Sbjct: 311 FVAHFDIPRNIESYYQETGRAGRDGLPAEAVMLYDPADISWLRRMLDE------------ 358
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
+ G + L M ++ E CRR + L +FGE D K C NC
Sbjct: 359 -----KDDGPQKQVEAHKLNAMSAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDIC 407
Query: 789 ----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
K F D T A+K + V Q F +++EV RG N +++ H+ LS +G
Sbjct: 408 LDPPKHF---DATQEAQKALSCVYRVNQSFGIGYVVEVLRGMQNIRIREQGHDKLSTYGL 464
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ + I R L+ + L + + + +S L++ + +A L+ G + L
Sbjct: 465 GRDHSHDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGEMTLELAV 516
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P + + +KSD +K N KL++ LR LR +
Sbjct: 517 PRLDTAARAAKSDKLSSK-------------------------NYDKKLFAKLRKLRKSI 551
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
E +G+ Y +F +ATL +++ +P + E+L +NG+G K+ KY L+ I+ I
Sbjct: 552 ADE--DGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGHRKLEKYADPFLDLIQEHIT 609
Query: 1025 E 1025
+
Sbjct: 610 Q 610
>gi|238793565|ref|ZP_04637189.1| ATP-dependent DNA helicase recQ [Yersinia intermedia ATCC 29909]
gi|238727155|gb|EEQ18685.1| ATP-dependent DNA helicase recQ [Yersinia intermedia ATCC 29909]
Length = 610
Score = 346 bits (888), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 221/657 (33%), Positives = 345/657 (52%), Gaps = 88/657 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 78 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVM-----DGCRSGQIKLLYIAPERLVM-ESF 131
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA +
Sbjct: 132 LDQLYQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEA 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+V+ L L +I SF+RPN LW + +R + G+ Y +
Sbjct: 188 TRGDIVRLLNLDQPLIQISSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 245
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +R VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRGQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCL-----EEKP---- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+G + L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 --------AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQSCGNCDI 402
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 403 CLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVMRGANNQRIREMGHDKLSVYGIGR 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +LR L+ L + + ++ S L++ ++ A ++ + L P
Sbjct: 463 EQSHEHWVSVLRQLIHLGLLSQNI-------AMFSALQLTEA-ARPILRAELPLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K+ S + G N KL++ LR LR +
Sbjct: 515 -IQSLKVRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIAD 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL +++++P T ELL +NG+G+ K+ ++G + I +
Sbjct: 551 EG--NIPPYVVFNDATLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMAMIRDHV 605
>gi|145588880|ref|YP_001155477.1| ATP-dependent DNA helicase RecQ [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047286|gb|ABP33913.1| ATP-dependent DNA helicase RecQ [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 612
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 223/654 (34%), Positives = 350/654 (53%), Gaps = 72/654 (11%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q I+ ++G D VLMPTG GKSL YQ+P+LI G+ +V+SPL++L+Q
Sbjct: 11 VFGFDQFRGAQESIVEHVVAGGDALVLMPTGAGKSLCYQIPSLIRRGVGVVVSPLIALMQ 70
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L Q ++ A+FL+ +++ Q++ +L + L+YV PE++ L L+
Sbjct: 71 DQVDALTQLDVKASFLNSSLDAATAQKVTSQLLAG--DLDLIYVAPERLMNPG-FLSILD 127
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
LN +A IDEAHCVSQWGHDFRP+Y+ L +L ++FP P +ALTATA A + ++
Sbjct: 128 RLNEGPGIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERFPAVPRIALTATADAPTRAEI 187
Query: 568 VQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE------FYVVSLEC 621
V+ L L + F SF+RPN+ +V ++ HF + Y +S
Sbjct: 188 VERLSLESAHQFVSSFDRPNIRY---RVLQKQNAKQQLEHFLDAEHPNDSGIIYCLSRRS 244
Query: 622 -----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
G A YH + R+ QK++ ++E I+ ATVAFGMGI+KP+VRFV
Sbjct: 245 VEDTAQWLQDRGWDAMPYHAGLSQEVRSANQKRFLREEGVIMVATVAFGMGIDKPNVRFV 304
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
H LPKS+EGY+QE GRAGRDG ++ + Y D + ++ M+ G A +
Sbjct: 305 AHLDLPKSMEGYYQETGRAGRDGLPANAWMVYGLGDVVSLRQMVDSGEASE--------- 355
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ RV + L ++ +CE+ DCR L +FGE +C CDNC ++
Sbjct: 356 ----DRKRV---ERQKLNALLGFCES-TDCRHQGILRYFGEA-HPGNC-GNCDNC--LEP 403
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
+ T +K + V TGQ+F +H+++V G + VK++ H+ +S G G L +
Sbjct: 404 VETWNATHEVQKALSCVYRTGQRFGVTHLIDVLLGKVTPRVKQYFHDQVSTFGIGSELNQ 463
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
S+ + + R LV +L ++ +YG LK+ + A ++ G Q V LR +A +
Sbjct: 464 SQWNSVFRQLVAGGYLEADIA---LYGG----LKLVDAIALPVLRGEQEVCLRKEAAYSK 516
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+K++KS + R+ P N D N L+ +L+ RT L ++ +
Sbjct: 517 SKVAKSGAS-------------KRSTHPF--TNIADEN----LWEALKAKRTELARQ--Q 555
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
GV Y IF ++TLQ + K P T ++ I G+G+AK+ +YG ++ +E+T+K
Sbjct: 556 GVPPYLIFHDSTLQEMVKSSPITLDQFSRIGGVGQAKLERYGTHFIKVVEATLK 609
>gi|394988714|ref|ZP_10381549.1| ATP-dependent DNA helicase RecQ [Sulfuricella denitrificans skB26]
gi|393792093|dbj|GAB71188.1| ATP-dependent DNA helicase RecQ [Sulfuricella denitrificans skB26]
Length = 616
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 339/648 (52%), Gaps = 68/648 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG +FR Q+ I+ SG D VLMPTGGGKSL YQLPAL+ G+ +V+SPL++L+Q
Sbjct: 13 VFGYSAFRDEQQAIVEHVTSGGDALVLMPTGGGKSLCYQLPALLRHGVGIVVSPLIALMQ 72
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEIL-RELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
DQ+ L Q + A FL+ ++ +++ R + D +LYV PE++ ++ L L
Sbjct: 73 DQVDALKQLGVKAAFLNSSLAADAARDVFGRLMRGDL---DILYVAPERLLMAN-FLSAL 128
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
E + A LA IDEAHCVSQWGHDFRP+Y+ L +L ++FP P +ALTATA A + +
Sbjct: 129 EQVQAGPGLALFAIDEAHCVSQWGHDFRPEYRELTVLHERFPAVPRIALTATADAPTRRE 188
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMDCEKVAE---RLQVGLSYGHFFLLKEFYVVSL---- 619
+V+ L L F SF+RPN+ A +LQ L H Y +S
Sbjct: 189 IVERLALEQAHQFVSSFDRPNIRYRVALKANARNQLQAFLETEHANDAGIVYCLSRKKVD 248
Query: 620 -------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E G A YH +D A R Q+++ ++E I+ ATVAFGMGI+KP+VRFV H
Sbjct: 249 ETAAWLKEKGWDALPYHAGLDAATRNANQRRFLREEGVIMVATVAFGMGIDKPNVRFVAH 308
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKS+EGY+QE GRAGRDG + + Y D + ++ M+S G A
Sbjct: 309 LDLPKSMEGYYQETGRAGRDGLPADAWMTYGLGDVVSMRQMLSSGDAP------------ 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
A RV + L ++ +CE CR L +FGE+ C + CDNC ++
Sbjct: 357 -AERKRV---ELQKLDALLGFCEATA-CRHQTILRYFGEE-HPGDCGQ-CDNC--LEPVD 407
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+ + V TGQ+F H+++V G V++ H+ L+ G G+ L++++
Sbjct: 408 TWDATQPAQMALSCVFRTGQRFGVVHLIDVLLGKATAKVEQFNHQQLTTFGIGQALSQTQ 467
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
S + R LV L ++ + YG L++ + ++ ++ G Q V LR
Sbjct: 468 WSSVYRQLVAAGLLNVDI---EAYGG----LRLTE-ESRPVLRGEQEVWLR--------- 510
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
D PAK S S +R NE L+ +L+ RT L +E +GV
Sbjct: 511 ---RDAEPAKKSRTSKAERGARAREAFAGANE------DPLWQALKAKRTELARE--QGV 559
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
Y IF ++TL + R P T E+ EI G+G+AK++KYG L+ +E
Sbjct: 560 PPYVIFHDSTLLEILNRRPGTLREMSEITGVGQAKLAKYGDEFLQVLE 607
>gi|322834919|ref|YP_004214946.1| ATP-dependent DNA helicase RecQ [Rahnella sp. Y9602]
gi|384260143|ref|YP_005404077.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis HX2]
gi|321170120|gb|ADW75819.1| ATP-dependent DNA helicase RecQ [Rahnella sp. Y9602]
gi|380756119|gb|AFE60510.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis HX2]
Length = 610
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 218/652 (33%), Positives = 343/652 (52%), Gaps = 78/652 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IIN +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+ A + A L+ +Q E++ + + K+LY+ PE++ D L Q
Sbjct: 78 MKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAG--RIKMLYIAPERLMMGD-FLEQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ N A + +DEAHC+SQWGHDFRP+Y+ LG LK ++P PV+ALTATA + +
Sbjct: 135 LQQWNP----AMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D RA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + VL Y +D ++ + E+ P
Sbjct: 311 FDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+G + L M ++ E CRRL+ L +FGE +A C NC
Sbjct: 357 ---AGAQQDVERHKLNAMNAFAEAQT-CRRLVLLNYFGEGKQNA-----CGNCDVCLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D A+K + +V GQ+F +++EV RGS NQ ++++ H+ L+++G GK +
Sbjct: 408 KRYDGLLDAQKALSVVARVGQRFGLGYVVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ ++R L+ + + + ++ S L++ +S A ++ G + L P I +
Sbjct: 468 HWTSVVRQLIHLGLITQNI-------AMHSALQLTES-ARPVLRGEIPLQLAVPR-IQTL 518
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K+ S G N KL++ LR LR L +
Sbjct: 519 KIKSSASQKTYGG-----------------------NYDRKLFAKLRKLRKSLADD--NN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
V Y +F + TL +++ +P + +LL+I G+G+ K+ K+G + I I
Sbjct: 554 VPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAMIRDHI 605
>gi|431795569|ref|YP_007222473.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786334|gb|AGA76463.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 725
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 228/664 (34%), Positives = 359/664 (54%), Gaps = 82/664 (12%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
K++ N KK+FG + FR NQ I++ + G++ FV+MPTG GKSL YQLPA+ G +VI
Sbjct: 4 KIKENLKKIFGFNQFRGNQEAIVDNILQGNNTFVIMPTGAGKSLCYQLPAVTKEGTAIVI 63
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL++L+++Q+ L I A FL+ + TE ++ +E+ S K LLYV PE + K
Sbjct: 64 SPLIALMKNQVDQLNAFGINAHFLNSTLSKTETNKVKKEVLSGATK--LLYVAPESLTKE 121
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL-GILKQKFPNTPVLALTAT 558
+ +E L + +L + + IDEAHC+S+WGHDFRP+Y+ + I+ Q P++ALTAT
Sbjct: 122 E----NVEFLKSAQL-SFVAIDEAHCISEWGHDFRPEYRKIKSIIAQIGDALPIIALTAT 176
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE-----------RLQVGLSYGH 607
AT V++D+ + L + +F+ SFNR NL+ + A+ + Q G S G
Sbjct: 177 ATPKVQQDIQRNLNMEEADLFKSSFNRTNLFYEVRPKAKSDTKKHLIKYVKSQKGKS-GI 235
Query: 608 FFLLKEFYVVSLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
+ L V + G AA YH ++ A R Q + +E++++ AT+AFGMGI
Sbjct: 236 IYCLSRKKVEEIAELLKVNGINAAPYHAGLESAMRIKNQDDFLNEEVDVVVATIAFGMGI 295
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
+KPDVR+VIH+ +PKS+EGY+QE GRAGRDG C+++Y Y D ++++ +
Sbjct: 296 DKPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYKYEDIVKLEKF--------N 347
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
P + R N +VL L M +Y E+ V CRR + L +FGE + C C
Sbjct: 348 KDKPVNEREN----AKVL------LQEMAAYAESSV-CRRRVLLHYFGESLNE-DC-GFC 394
Query: 783 DNCSKIK-SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
DNC K + +F K+ TA +E VK T Q+FS HI+ V RG N+Y++ + H+ LS+
Sbjct: 395 DNCKKKRDAFDAKEDILTA---IEAVKETHQRFSLDHIVNVIRGEQNEYMESYNHDGLSV 451
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
G GK + ++R +I L ++++ YG V+K++++
Sbjct: 452 FGKGKEENERYWRSVIRQTMIHGLLEKDIEN---YG----VIKLSKTSED---------F 495
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
L+ P I TK D ND + N + KL+ L++ R
Sbjct: 496 LKNPHEITFTKDHDFD-------------EMIENDEAEEIAN-TNKAYDEKLFELLKVER 541
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ K +G+ Y IF + +L+ ++ P + EEL ++NG+G KV+K+G L+ I +
Sbjct: 542 KKVAK--SKGLPPYVIFQDPSLEEMATVYPTSREELAQVNGVGMGKVTKFGAPFLKLITN 599
Query: 1022 TIKE 1025
++E
Sbjct: 600 YVEE 603
>gi|259906892|ref|YP_002647248.1| ATP-dependent DNA helicase RecQ [Erwinia pyrifoliae Ep1/96]
gi|387869602|ref|YP_005800972.1| ATP-dependent DNA helicase RecQ [Erwinia pyrifoliae DSM 12163]
gi|224962514|emb|CAX53969.1| ATP-dependent DNA helicase [Erwinia pyrifoliae Ep1/96]
gi|283476685|emb|CAY72514.1| ATP-dependent DNA helicase RecQ [Erwinia pyrifoliae DSM 12163]
Length = 610
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 339/652 (51%), Gaps = 79/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ II +++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ S +LLY+ PE++ D L Q
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSG--TVRLLYIAPERLMM-DNFLEQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N A + +DEAHC+SQWGHDFRP+Y LG L+Q+ P+ PV+ALTATA + +
Sbjct: 135 LTHCNP----AMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ + L L + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIARLLQLNDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D A RA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGMDNAHRAHVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L Y +D ++ + +
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLEE---------------- 354
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A CDNC
Sbjct: 355 -KTQGPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQQA-----CDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + GQ+F +I+E+ RG+ NQ ++ +H+ L ++G G+ L+
Sbjct: 408 RRYDGLLEAQKALSCIYRVGQRFGMGYIVEILRGANNQRIRDMQHDKLPVYGIGRDLSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ +LR L+ + + + ++ S L++ ++ A ++ G +++L P ++
Sbjct: 468 HWTSVLRQLIHLGLVTQNI-------AMYSALQLTEA-ARPVLRGDVSLLLAVPRLVSVK 519
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
T S Q N KL++ LR LR + E +
Sbjct: 520 -------------------------TRSSSQKSFGGNYDRKLFAKLRKLRKAIADE--DN 552
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++++P T E+L +NG+G K+ ++G L I+ I
Sbjct: 553 LPPYVVFNDATLIEMAEQMPITASEMLSVNGVGHKKLERFGKPFLLMIKEHI 604
>gi|343516209|ref|ZP_08753250.1| ATP-dependent DNA helicase RecQ [Vibrio sp. N418]
gi|342796629|gb|EGU32302.1| ATP-dependent DNA helicase RecQ [Vibrio sp. N418]
Length = 612
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 221/661 (33%), Positives = 340/661 (51%), Gaps = 93/661 (14%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q ++I A + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 22 EQVFGYQQFRSGQEQVIEAAIQGKDSLVIMPTGGGKSLCYQVPALVREGLTLVISPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ +M E + +NS KL+YV+PE+V D + R
Sbjct: 82 MKDQVDQLKADGVAAECINSSMPREELISVYNRMNSG--ALKLVYVSPERVLMRDFIER- 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ ++ L+ I +DEAHC+SQWGHDFRP+Y LG LK FP+ P +ALTATA + +
Sbjct: 139 LQGVS----LSMIAVDEAHCISQWGHDFRPEYASLGQLKHYFPHVPFMALTATADDATRN 194
Query: 566 DVVQALGLVNCIIFRQSFNRPNL----------------WMDCEKVAERLQVGLSYGHFF 609
D+V L LV + + SF+RPN+ ++D +K G+ Y
Sbjct: 195 DIVSRLQLVEPLNYLGSFDRPNIRYTLLEKHKPVSQIIRYLDTQKG----HCGIIYCGSR 250
Query: 610 LLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VR
Sbjct: 251 KKVEMVTEKLCNNHIRAASYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 310
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV H +P++IE Y+QE GRAGRDG + V+ Y +D ++ M+ +
Sbjct: 311 FVAHFDIPRNIESYYQETGRAGRDGLPAEAVMLYDPADISWLRRMLDE------------ 358
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
+ G + L M ++ E CRR + L +FGE D K C NC
Sbjct: 359 -----KDEGPQKQVEAHKLNAMSAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDIC 407
Query: 789 ----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
K F D T A+K + V Q F +++EV RG N +++ H+ LS +G
Sbjct: 408 LDPPKHF---DATQEAQKALSCVYRVNQSFGIGYVVEVLRGMQNIRIREQGHDKLSTYGL 464
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ + + R L+ + L + + + +S L++ + +A L+ G + L
Sbjct: 465 GRDHSHDYWVSVFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGEMTLELAV 516
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P + + +KSD +K N KL++ LR LR +
Sbjct: 517 PRLDTAARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSI 551
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
E +G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+ I
Sbjct: 552 ADE--DGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEHIT 609
Query: 1025 E 1025
+
Sbjct: 610 Q 610
>gi|161486585|ref|NP_935980.2| ATP-dependent DNA helicase RecQ [Vibrio vulnificus YJ016]
Length = 611
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 222/657 (33%), Positives = 345/657 (52%), Gaps = 85/657 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG +FR Q+ +I A + G D V+MPTGGGKSL YQ+PAL+ PGITLVISPL+SL+
Sbjct: 22 QVFGYQTFREGQQSVIEAAVEGKDSLVIMPTGGGKSLCYQIPALVRPGITLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + + +++ + KL+YV+PE+V D + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLSRDALLSVYNRMHAG--QLKLVYVSPERVLMRDFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
E+L LA I +DEAHC+SQWGHDFRP+Y LG LK FP+ P +ALTATA + ++D
Sbjct: 139 ENLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKHHFPHVPFMALTATADDATRKD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMD-CEKVAERLQV-----------GLSYGHFFLLKEF 614
++ L L ++ SF+RPN+ D EK QV G+ Y E
Sbjct: 195 ILSRLHLNEPHVYLGSFDRPNIRYDLVEKHKPVSQVIRYLESQKGNCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHF 314
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 315 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADITWLRRMLDE----------------- 357
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ G + + L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 358 KDDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPK 411
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T+ A+K + V Q F +++EV RG N +++H H+ +S +G G+ +
Sbjct: 412 HF---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRIREHGHDKISTYGLGRDHS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 469 HDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDMTLELAVPRLDT 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +K+D KLS D KL++ LR LR + E
Sbjct: 521 AARSAKAD-----------KLSNKHYDK--------------KLFAKLRKLRKSIADE-- 553
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
E + Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I +
Sbjct: 554 EEIPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHITHY 610
>gi|406901072|gb|EKD43834.1| hypothetical protein ACD_72C00100G0005 [uncultured bacterium]
Length = 619
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 228/654 (34%), Positives = 352/654 (53%), Gaps = 92/654 (14%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG SFR NQ EII M D FVLMPTGGGKSL YQ+PAL+ G+T+VISPL++L
Sbjct: 9 KTKFGYESFRFNQEEIIQTIMQKRDAFVLMPTGGGKSLCYQIPALLFDGLTVVISPLIAL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV-AKSDVLLR 504
++DQ+ L I A +++ +M+ E ++ +L D + KLLYV+PE++ + L
Sbjct: 69 MKDQVDALRLNGIKAAYMNSSMDSDEISDLYEQL--DRHEIKLLYVSPERLLGNNQQFLV 126
Query: 505 QLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
L LN ++ IDEAHC+S WGHDFRP+Y+ L LK+ FP+ P +ALTATA +
Sbjct: 127 YLRDLN----ISLFAIDEAHCISSWGHDFRPEYRMLSSLKKDFPDVPTIALTATADNLTR 182
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE-------FYVV 617
+D++ L L N IF SFNRPN+ E + + +SY LK+ YV+
Sbjct: 183 DDILNKLKLKNPSIFVSSFNRPNINYSVEPKRKMYEEIVSY-----LKKHRSDSGIIYVL 237
Query: 618 SLECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
S K A YH ++ +R Q+ + KD++ I+ AT+AFGMGINK +
Sbjct: 238 SRNSAEKMAEKLKKDGFSTKPYHAGLNNEKRQRHQEMFIKDQVKIMVATIAFGMGINKSN 297
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH LPK+IE Y+QE GRAGRDG +S +LYYS D +++K + E +P
Sbjct: 298 VRFVIHADLPKNIESYYQETGRAGRDGLKSEAILYYSGGDVVKLKRF---AMVENNP--- 351
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
RV+ L +M + CE + CRR L +FGE+ CD+C
Sbjct: 352 --------EQTRVM---LHKLSQMATLCEANA-CRRRAILNYFGEE-----APDKCDSCD 394
Query: 787 KIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
+ EK D T A+K + V ++ +++++ RGS ++ + H+ L +G G
Sbjct: 395 VCMTVREKFDGTVIAQKALSAVARLESRYGLTYVVDFLRGSKSERISDS-HKNLKTYGIG 453
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
K ++K E R + L+ ++L + GS +L + + K+ ++++G++ V L
Sbjct: 454 KDISKEEWYRYFKDLISFNYLKQ-------VGSEYPILTLTE-KSRDVLMGKEKVFLVQL 505
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
+A K K ++LS D + +L+++L+++RT L
Sbjct: 506 TAKKEHK---------KETVLS------------------DQSYEQELFNALKIIRTDLA 538
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
++ E V AY +F +ATL L+ +P++ E++ +I+G G K++KYG LE +
Sbjct: 539 EK--ENVPAYLVFSDATLLELAAYLPQSLEDVRKISGFGDIKLAKYGQVFLEAV 590
>gi|343510097|ref|ZP_08747353.1| ATP-dependent DNA helicase RecQ [Vibrio scophthalmi LMG 19158]
gi|342803236|gb|EGU38611.1| ATP-dependent DNA helicase RecQ [Vibrio scophthalmi LMG 19158]
Length = 612
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 223/658 (33%), Positives = 344/658 (52%), Gaps = 87/658 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q ++I A + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 22 EQVFGYQQFRSGQEQVIEAAIQGKDSLVIMPTGGGKSLCYQVPALVREGLTLVISPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ +M E + +NS KL+YV+PE+V D + R
Sbjct: 82 MKDQVDQLKADGVAAECINSSMPREELISVYNRMNSG--ALKLVYVSPERVLMRDFIER- 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ ++ L+ I +DEAHC+SQWGHDFRP+Y LG LK FP+ P +ALTATA + +
Sbjct: 139 LQGVS----LSMIAVDEAHCISQWGHDFRPEYASLGQLKHYFPHVPFMALTATADDATRN 194
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSY-----GHFFLL------KE 613
D+V L LV + + SF+RPN+ + EK Q+ + Y GH ++ K
Sbjct: 195 DIVSRLQLVEPLNYLGSFDRPNIRYTLLEKHKPVSQI-IRYLETQKGHCGIIYCGSRKKV 253
Query: 614 FYVVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
V C + +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV
Sbjct: 254 EMVTEKLCNNHIRAASYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVA 313
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H +P++IE Y+QE GRAGRDG + V+ Y +D ++ M+ +
Sbjct: 314 HFDIPRNIESYYQETGRAGRDGLPAEAVMLYDPADISWLRRMLDE--------------- 358
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI--- 788
+ G + L M ++ E CRR + L +FGE D K C NC
Sbjct: 359 --KDEGPQKQVEAHKLNAMSAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDP 410
Query: 789 -KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K F D T A+K + V Q F +++EV RG N +++ H+ LS +G G+
Sbjct: 411 PKHF---DATQEAQKALSCVYRVNQSFGIGYVVEVLRGMQNIRIREQGHDKLSTYGLGRD 467
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ + R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 468 HSHDYWVSVFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGEMTLELAVPRL 519
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ + +KSD +K N KL++ LR LR + E
Sbjct: 520 DTAARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE 554
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+ I +
Sbjct: 555 --DGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEHITQ 610
>gi|149049047|gb|EDM01501.1| rCG29929, isoform CRA_a [Rattus norvegicus]
Length = 542
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 187/482 (38%), Positives = 274/482 (56%), Gaps = 45/482 (9%)
Query: 406 MSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSG 465
M+ D+F++MPTGGGKSL YQLPAL G TLVI PL+SL++DQ+M L Q I AT L+
Sbjct: 1 MARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNS 60
Query: 466 NMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHC 525
+ + + E+ + KL+YVTPEK+AKS + + +LE L + +DE HC
Sbjct: 61 SSSKEHVKCVHTEMMNKNSHLKLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHC 120
Query: 526 VSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNR 585
SQWGHDFRPDY+ LGILK++FPN ++ LTATAT V +D + L + C+ F SFNR
Sbjct: 121 CSQWGHDFRPDYKALGILKRQFPNISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNR 180
Query: 586 PNLWMDC-----------EKVAERL------QVGLSYGHFFLLKEFYVVSLE-CGHKAAF 627
PNL+ + E +A + + G+ Y E +SL+ G +A
Sbjct: 181 PNLYYEVRQKPSSAEDFIENIANLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGT 240
Query: 628 YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 687
YH +++P R V QWS +E+ ++ ATVAFGMGI+KPDVRFVIHHS+ KS+E Y+QE G
Sbjct: 241 YHANMEPEDRTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESG 300
Query: 688 RAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENL 747
RAGRD R+ C+LYY + D R+ M+ + N G+ + L
Sbjct: 301 RAGRDDWRADCILYYGFGDIFRISSMVV-----------------MENVGQ------QKL 337
Query: 748 LRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELV 807
MVSYC+N CRR L HF E +++ C K CDNC K SF +K++T+ + L++++
Sbjct: 338 YEMVSYCQNISKCRRALIAQHFDEVWNADACNKMCDNCCKDDSFEKKNITEHCQALIKIL 397
Query: 808 KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLM 867
K L++ + + K R +++ L + + +I+ H +++ +L
Sbjct: 398 KQAEGLNEKLTPLKLIDAWMGKGAAKFRVAGVAVPA----LPREDLEKIIVHALLQQYLK 453
Query: 868 EE 869
E+
Sbjct: 454 ED 455
>gi|91791699|ref|YP_561350.1| ATP-dependent DNA helicase RecQ [Shewanella denitrificans OS217]
gi|91713701|gb|ABE53627.1| ATP-dependent DNA helicase RecQ [Shewanella denitrificans OS217]
Length = 613
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 220/657 (33%), Positives = 344/657 (52%), Gaps = 85/657 (12%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
+L A ++VFG SFR QRE++ T++G D V+MPTGGGKS+ YQLPAL+ G+T+V+
Sbjct: 18 ELSARLQQVFGYRSFREGQREVMERTLAGEDTLVIMPTGGGKSICYQLPALLFQGLTIVV 77
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL+SL++DQ+ L+Q +PA +L+ + +LR+L+S + KLLYV+PE++ +
Sbjct: 78 SPLISLMKDQVDSLIQTGVPAAYLNSSQPREVSMNVLRQLHSG--EIKLLYVSPERLLRE 135
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
D + R L+ L+ ++ +DEAHC+SQWGHDFRP+Y LG LKQ FP+ P++ALTATA
Sbjct: 136 DFIER-LQHLH----VSLFAVDEAHCISQWGHDFRPEYAELGRLKQLFPHVPLMALTATA 190
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSL 619
+ ++ + + L + SF+RPN+ VAE+L F + +
Sbjct: 191 DQATRKSICERLN-IEPFCLLSSFDRPNIRY---TVAEKLNAASQLKQFIASQSGNSGII 246
Query: 620 EC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
C G KA YH +R VQ ++ KD+++I+ ATVAFGMGIN
Sbjct: 247 YCSSRRRVDEVAERLRLQGLKAEAYHAGRSQEERGDVQDKFLKDQLDIVVATVAFGMGIN 306
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
K +VRFV+H+ +PKS+E Y+QE GRAGRDG + + + +D RV+H+I Q
Sbjct: 307 KSNVRFVVHYDIPKSVEAYYQETGRAGRDGLDAEAYMLFDPADIGRVRHLIEQS------ 360
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
PG + + L M ++ E CRR + L +F E K C
Sbjct: 361 -EPGPQQ----------QVEFHKLHTMAAFAEAQT-CRRQVLLHYFDES-----ASKPCG 403
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC I D ++ AKK++ V GQ+F +H++EV RGS V H+ LS
Sbjct: 404 NCDICINPPKRYDGSEDAKKVLSCVFRLGQRFGINHLIEVLRGSKAANVLDRGHDKLSTW 463
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK + + R L+ ++V + S + +N + A ++ G Q + L
Sbjct: 464 GIGKDKSPEHWLSVTRQLIHLGLASQDVTR-------GSSITLNDA-ARPVLRGEQTLKL 515
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + L+S K S + P Q +L++ L++LR
Sbjct: 516 AEP----------------RIQLVSSKRKASNSRAPQQ--------YDRQLFARLKLLRR 551
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ ++ + Y +F +A+L +S +P + E+L +NG+G+ K+S++G L+ I
Sbjct: 552 EIAEK--NDIPPYLVFNDASLAEMSAMLPTSPGEMLAVNGVGERKLSRFGGEFLDEI 606
>gi|407804673|ref|ZP_11151487.1| ATP-dependent DNA helicase RecQ [Alcanivorax sp. W11-5]
gi|407021366|gb|EKE33140.1| ATP-dependent DNA helicase RecQ [Alcanivorax sp. W11-5]
Length = 601
Score = 346 bits (887), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 337/648 (52%), Gaps = 76/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG HSFR +Q+ II G+D VLMPTGGGKSL YQ+PAL+ G +VISPL++L
Sbjct: 10 ERVFGYHSFRGHQQAIIETLWHGNDALVLMPTGGGKSLCYQIPALLHSGTGVVISPLIAL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L + + A FL+ ++ + I E + + LLY+ PE++ + L
Sbjct: 70 MQDQVDALHELGVRAGFLNSSL--GREDIIATEQALLHGQLDLLYIAPERLTQQRTL--- 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL + LA IDEAHCVSQWGHDFR +Y LG+L ++FP+ P +ALTATA +E
Sbjct: 125 --SLLKQIPLALFAIDEAHCVSQWGHDFRSEYLQLGLLHEQFPDVPRIALTATADMRTRE 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY---------GHFFLLKEFYV 616
++ + L L + F SF+RPN+ + + Q L + G + L V
Sbjct: 183 EIARRLQLTDAAHFVSSFDRPNIQYRITQKSNARQQLLRFLRAEHPGDAGIVYCLSRNKV 242
Query: 617 VSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ + G A YH + AQR Q+++ +++ I+ AT+AFGMGI+KPDVRFV
Sbjct: 243 DTTAEWLQQQGFNALPYHAGLPAAQRRDHQQRFLREDGVIMVATIAFGMGIDKPDVRFVA 302
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKSIEGY+QE GRAGRDG+ ++ L Y D I+++ M+ E S + H R
Sbjct: 303 HLDLPKSIEGYYQETGRAGRDGEPATAWLVYGVEDVIKLRQML-----EGSAGSEDHKR- 356
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ + L M+ CE V CRR L +FGE D A C CD C +
Sbjct: 357 ----------SERQKLDAMLGLCEI-VSCRRHALLTYFGEASD-AQC-GNCDAC--LHPA 401
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D +D +K + V TGQ+F +H+++V RGS N+ V++ H+ LS +G G L +
Sbjct: 402 RTWDASDAVRKALSCVYRTGQRFGVNHLIDVLRGSDNEKVRQFGHQHLSTYGIGSDLPTA 461
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ R LV L +V D YG++ ++ G + V LR
Sbjct: 462 GWRSVFRQLVARGLLRVDV---DGYGALHLT-----EACRPILRGEEAVHLR-------- 505
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
DV A + S S+ P+ P+ + L+ +LR LR L E G
Sbjct: 506 ----EDVKEA------AERSRSKRHQPALPEED------RPLWEALRKLRKTLADE--HG 547
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V Y IF + TL + +R P E ELL + G+G+ K+ ++G LE I
Sbjct: 548 VPPYVIFNDRTLTEMVERRPLKENELLSVTGVGETKLERFGDAFLEVI 595
>gi|421781133|ref|ZP_16217606.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica A30]
gi|407756805|gb|EKF66915.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica A30]
Length = 610
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 219/648 (33%), Positives = 344/648 (53%), Gaps = 78/648 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A + +Q E++ S + K+LY+ PE++ D L
Sbjct: 78 MKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRSG--QIKMLYIAPERLMM-DSFLDL 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP PV+ALTATA S +
Sbjct: 135 LDHCPP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATADESTRG 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + ++ SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIVRLLALHDPLVQISSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTTARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+G+ L+ L M ++ E CRRL+ L +FGE ++ C NC
Sbjct: 357 ---AGQQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGK-----QQNCGNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D + A+K + V GQ+F +I+EV RGS NQ ++++ H+ L ++G G+
Sbjct: 408 KRYDGLEDARKALSCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHDKLPVYGIGREQTTE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ +LR L+ F+ + + ++ S L++ ++ A ++ G + L P I S
Sbjct: 468 HWTSVLRQLIHLGFITQNI-------AMHSALQLTEA-ARPVLRGELELQLAVPR-IQSL 518
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K SR S Q N KL++ LR LR + E E
Sbjct: 519 K--------------------SRG---SANQKSYGGNYDRKLFAKLRKLRKSIADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y +F +ATL +++++P +LL +NG+G+ K+ ++G + I
Sbjct: 554 IPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAMI 601
>gi|386823577|ref|ZP_10110722.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica PRI-2C]
gi|386379516|gb|EIJ20308.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica PRI-2C]
Length = 610
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 219/648 (33%), Positives = 344/648 (53%), Gaps = 78/648 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A + +Q E++ S + K+LY+ PE++ D L
Sbjct: 78 MKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRSG--QIKMLYIAPERLMM-DSFLDL 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP PV+ALTATA S +
Sbjct: 135 LDHCPP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATADESTRG 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + ++ SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIVRLLALHDPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTTARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+G+ L+ L M ++ E CRRL+ L +FGE ++ C NC
Sbjct: 357 ---AGQQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGK-----QQNCGNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D + A+K + V GQ+F +I+EV RGS NQ ++++ H+ L ++G G+
Sbjct: 408 KRYDGLEDARKALSCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHDKLPVYGIGREQTTE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ +LR L+ F+ + + ++ S L++ ++ A ++ G + L P I S
Sbjct: 468 HWTSVLRQLIHLGFITQNI-------AMHSALQLTEA-ARPVLRGELELQLAVPR-IQSL 518
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K SR S Q N KL++ LR LR + E E
Sbjct: 519 K--------------------SRG---SANQKSYGGNYDRKLFAKLRKLRKSIADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y +F +ATL +++++P +LL +NG+G+ K+ ++G + I
Sbjct: 554 IPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAMI 601
>gi|417854228|ref|ZP_12499548.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|338218289|gb|EGP04066.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_goat]
Length = 632
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 222/649 (34%), Positives = 351/649 (54%), Gaps = 82/649 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q E+I+AT+ G D V+M TG GKSL YQ+PAL G+TLVISPL+SL++
Sbjct: 33 VFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMK 92
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL I A +L+ + +TEQQ++ +L S KLLYV+PEKV +
Sbjct: 93 DQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSG--TLKLLYVSPEKVMTTSFF----- 145
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L + ++ + IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++D+
Sbjct: 146 HLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATADHATRQDI 205
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEFY 615
++ L L + ++ SF+RPN+ + EK + ++ + G+ Y + E
Sbjct: 206 LRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPMEQLCRFVLGQKGKSGIIYCNSRSKVERI 265
Query: 616 VVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
SL G A YH ++ AQR VQ+ + +D + ++ AT+AFGMGINK +VRFV+H
Sbjct: 266 AESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFD 325
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--RFN 732
LP+SIE Y+QE GRAGRD + VL+Y +D+ + ++ + P +P
Sbjct: 326 LPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILL-----EKPESPQRQIEALK 380
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ G E+ T CRRL+ L +FGE H +K C NC +
Sbjct: 381 LQAIGEFAESQT---------------CRRLVLLNYFGE-----HQQKPCQNCDICLDPP 420
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K++ + GQ+F +++ V RG +Q +K ++HE LS++G GK +K
Sbjct: 421 KQYDGLIDAQKVMSTIYRIGQRFGVHYVIAVLRGLSSQKIKDNQHEQLSVYGIGKDKSKE 480
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V+ ++ L++ ++ A ++ G Q + L P
Sbjct: 481 HWQSVIRQLIHLGFIKQ------VFDHFNATLQLTEN-AKPILRGEQPLSLAMP------ 527
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ S L+ ++P R + Q + D L++ LR LR + + E
Sbjct: 528 ----------RISSLTSVVAPQRY---AMAQYDKD------LFARLRFLRKQIADK--EN 566
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ AY +F +ATLQ +++ P T+ E+L ING+G K ++ ++ I+
Sbjct: 567 IPAYIVFNDATLQEMAQYQPTTKAEMLAINGVGATKFERFAQPFMQIIQ 615
>gi|188532380|ref|YP_001906177.1| ATP-dependent DNA helicase RecQ [Erwinia tasmaniensis Et1/99]
gi|188027422|emb|CAO95269.1| ATP-dependent DNA helicase [Erwinia tasmaniensis Et1/99]
Length = 610
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 340/652 (52%), Gaps = 79/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ II +++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ S K +LLY+ PE++ D L Q
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSG--KVRLLYIAPERLMM-DNFLEQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N A + +DEAHC+SQWGHDFRP+Y LG L+Q+ P+ PV+ALTATA + +
Sbjct: 135 LTHCNP----AMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATADDTTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ + L L + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIARLLQLDDPLIQVSSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D RA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGMDNVHRARVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L Y +D ++ + + V
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLEEKV-------------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G +L+ L M ++ E CRRL+ L +FGE A CDNC
Sbjct: 357 ---QGPLLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQQA-----CDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + GQ+F +I+E+ RG+ NQ ++ +H+ L ++G G+ +
Sbjct: 408 RRYDGLVEAQKALSCIYRVGQRFGMGYIVEILRGANNQRIRDMQHDKLPVYGIGRDQSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ +LR L+ + + + ++ S L++ ++ A ++ G ++ L P ++
Sbjct: 468 HWTSVLRQLIHLGLVTQNI-------AMHSALQLTEA-ARPVLRGEVSLQLAVPRLVS-- 517
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
V P G Q N KL++ LR LR + + +
Sbjct: 518 ------VKPRGGG-----------------QKSFGGNYDRKLFAKLRKLRKAIADD--DN 552
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++++P T E+L +NG+G K+ ++G L I+ +
Sbjct: 553 LPPYVVFNDATLIEMAEQMPITASEMLSVNGVGHKKLERFGKPFLLMIKEHV 604
>gi|389798157|ref|ZP_10201184.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 116-2]
gi|388445812|gb|EIM01870.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 116-2]
Length = 609
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 239/664 (35%), Positives = 345/664 (51%), Gaps = 94/664 (14%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+ ++ G D VLMPTGGGKSL YQ+PAL+ G +V+SPL++L
Sbjct: 10 QSVFGYPSFRGQQQAVVEHLGEGGDALVLMPTGGGKSLCYQIPALLRQGTGIVVSPLIAL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDV--LL 503
+QDQ+ L +A + A +L+ ++ Q+E+ R+L + + LLYV PE++ S LL
Sbjct: 70 MQDQVDALREAGVAAAYLNSSLGAEAQREVERQLLAG--ELNLLYVAPERLLTSRFQGLL 127
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
+E +A IDEAHCVSQWGHDFRP+Y+ L IL Q+FP P +ALTATA
Sbjct: 128 ESIE-------VALFAIDEAHCVSQWGHDFRPEYRELAILHQRFPQVPRIALTATADPRT 180
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEF--------- 614
+E++V+ L L + F SF+RPN+ +VGL + L EF
Sbjct: 181 REEIVERLSLQHARQFVSSFDRPNIGY---------RVGLRHNAKRQLGEFLQGHQGESG 231
Query: 615 --YVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
Y +S E G +A YH +D A RA Q+++ +++ ++ ATVAFGMG
Sbjct: 232 IVYCLSRRKVDDTAAWLAESGVEALPYHAGLDAATRAKNQQRFLREDGVVMVATVAFGMG 291
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
I+KPDVRFV H LP+SIEGY+QE GRAGRDG + + Y SD + + MI+Q +
Sbjct: 292 IDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTMSQMIAQSESAD 351
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
RV E+LL +Y E CRR L L FGE + C
Sbjct: 352 -------------ERKRVERQKLESLL---AYAEA-TGCRRQLLLGAFGEVYPGP-CGH- 392
Query: 782 CDNC-SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
CDNC + K++ D T A+K + V TGQ++ S H+++V RG + V H LS
Sbjct: 393 CDNCLAPPKTW---DATVPAQKALSAVYRTGQRYGSGHVIDVLRGEETERVLALDHHRLS 449
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
G G L + + + R L+ L + ++ YG+ L++ + L GRQ +
Sbjct: 450 TFGVGADLDEKQWRSVFRQLLAAGLLEAD---AEGYGT----LRLTAASRSVLSGGRQ-L 501
Query: 901 VLRFPSAINSTKLSKSD---VTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSL 957
LR + + D VT KGS G L + +L+ +L
Sbjct: 502 KLREDARPERASRRRRDSKLVTSDKGS--GGSLGIEAYEQ--------------ELWDAL 545
Query: 958 RMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLE 1017
R LRT L K+ +GV Y +F +ATL + + +P E+EL I+G+G+AK+ +YG L
Sbjct: 546 RALRTQLAKQ--QGVPPYVVFHDATLLAMLRAMPANEDELATISGVGEAKLKRYGSDFLA 603
Query: 1018 TIES 1021
I +
Sbjct: 604 VINA 607
>gi|270264266|ref|ZP_06192533.1| ATP-dependent DNA helicase RecQ [Serratia odorifera 4Rx13]
gi|270041915|gb|EFA15012.1| ATP-dependent DNA helicase RecQ [Serratia odorifera 4Rx13]
Length = 612
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 219/648 (33%), Positives = 344/648 (53%), Gaps = 78/648 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 20 RDTFGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 79
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A + +Q E++ S + K+LY+ PE++ D L
Sbjct: 80 MKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRSG--QIKMLYIAPERLMM-DSFLDL 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP PV+ALTATA S +
Sbjct: 137 LDHCPP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATADESTRG 192
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + ++ SF+RPN+ + EK +R + G+ Y + E
Sbjct: 193 DIVRLLALHDPLVQISSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGIIYCNSRAKVE 252
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV+H
Sbjct: 253 DTTARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVH 312
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 313 FDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EEKP--------- 358
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+G+ L+ L M ++ E CRRL+ L +FGE ++ C NC
Sbjct: 359 ---AGQQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGK-----QQNCGNCDICLDPP 409
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D + A+K + V GQ+F +I+EV RGS NQ ++++ H+ L ++G G+
Sbjct: 410 KRYDGLEDARKALSCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHDKLPVYGIGREQTTE 469
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ +LR L+ F+ + + ++ S L++ ++ A ++ G + L P I S
Sbjct: 470 HWTSVLRQLIHLGFITQNI-------AMHSALQLTEA-ARPVLRGELELQLAVPR-IQSL 520
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K SR S Q N KL++ LR LR + E E
Sbjct: 521 K--------------------SRG---SANQKSYGGNYDRKLFAKLRKLRKSIADE--EN 555
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y +F +ATL +++++P +LL +NG+G+ K+ ++G + I
Sbjct: 556 IPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAMI 603
>gi|384213982|ref|YP_005605145.1| ATP-dependent DNA helicase [Bradyrhizobium japonicum USDA 6]
gi|354952878|dbj|BAL05557.1| ATP-dependent DNA helicase [Bradyrhizobium japonicum USDA 6]
Length = 621
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 343/648 (52%), Gaps = 66/648 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q EII G + VLMPTGGGKSL YQLP+L+ G +V+SPL++L++
Sbjct: 25 VFGLPGFRGAQGEIIRHVSDGGNCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLIALMR 84
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL+A + A L+ ++ E +I R L + LLYV PE++ L
Sbjct: 85 DQVAGLLEAGVNAAALNSSLTLQEASDIERRLIAG--DLDLLYVAPERLVTPRCL----- 137
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
SL A+ +A IDEAHCVSQWGHDFRP+Y GL I+ ++FPN P +ALTATA ++++
Sbjct: 138 SLLAQAKVALFAIDEAHCVSQWGHDFRPEYVGLSIIAERFPNVPRIALTATADELTRKEI 197
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVSL----- 619
V+ L L + F SF+RPN+ +D +L+ + H Y +S
Sbjct: 198 VERLRLADSPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERHTGDAGVVYCLSRNRVEE 257
Query: 620 ------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G A YH +D + R+ Q ++ ++ +I AT+AFGMGI+KPDVRFV H
Sbjct: 258 VAAALDDAGIAALPYHAGLDSSIRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHL 317
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S+ + Y SD ++ + MI + + G + F
Sbjct: 318 DLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDE--------SSGSDDFKR 369
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+ G+ L +V E CRR L +FGE ++AH CDNC
Sbjct: 370 VSIGK--------LDALVGLAET-AQCRRKRLLAYFGEA-ETAHNCGNCDNCLTPPKM-- 417
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
+D A+KL+ TGQ+F + +++V G L + V + H+ LS+ G G+ L +++
Sbjct: 418 RDGKVLAQKLLSCAYRTGQRFGAMQLIDVLIGRLTEKVTQFGHDKLSVFGIGRELNETQW 477
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+LR LV L + S+ +G+ LK+ +S A ++ G V LR + +
Sbjct: 478 RTVLRQLVAMGHLYSD---SEAFGA----LKLTES-ARGVLRGETEVWLREEAPGTRVRA 529
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
S++ G L+P+ N PQ +VD L A+ LR R+ + +E GV
Sbjct: 530 SRTKSR-------RGDLAPAAN----APQGDVDPELRAR----LRSWRSDIARE--RGVP 572
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
AY + +AT+ + + P T +EL + GIG K+ YG LL+ +++
Sbjct: 573 AYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVKT 620
>gi|238789392|ref|ZP_04633178.1| ATP-dependent DNA helicase recQ [Yersinia frederiksenii ATCC 33641]
gi|238722535|gb|EEQ14189.1| ATP-dependent DNA helicase recQ [Yersinia frederiksenii ATCC 33641]
Length = 610
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 220/657 (33%), Positives = 345/657 (52%), Gaps = 88/657 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATLAGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 78 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVM-----DGCRSGQIKLLYIAPERLVM-ESF 131
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA +
Sbjct: 132 LDQLHQWRP----GLLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEA 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+V+ L L +I SF+RPN LW + +R + G+ Y +
Sbjct: 188 TRGDIVRLLNLDQPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 245
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCL-----EEKP---- 356
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+G + L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 --------AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQSCGNCDI 402
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 403 CLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREFGHDKLSVYGIGR 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +LR L+ L + + ++ S L++ ++ A ++ + L P
Sbjct: 463 EQSHEHWVSVLRQLIHLGLLSQNI-------AMFSALQLTEA-ARPVLRAELPLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K+ S + G N KL++ LR LR +
Sbjct: 515 -IQSLKVRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIAD 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL +++++P T ELL +NG+G+ K+ ++G + I +
Sbjct: 551 EG--NIPPYVVFNDATLLEMAEQLPITASELLSVNGVGQRKLERFGAPFMAMIRDHV 605
>gi|27364385|ref|NP_759913.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus CMCP6]
gi|27360504|gb|AAO09440.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus CMCP6]
Length = 611
Score = 345 bits (886), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 222/657 (33%), Positives = 345/657 (52%), Gaps = 85/657 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG +FR Q+ +I A + G D V+MPTGGGKSL YQ+PAL+ PGITLVISPL+SL+
Sbjct: 22 QVFGYQTFREGQQSVIEAAVEGKDSLVIMPTGGGKSLCYQIPALVRPGITLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + + +++ + KL+YV+PE+V D + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLSRDALLSVYNRMHAG--QLKLVYVSPERVLMRDFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
E+L LA I +DEAHC+SQWGHDFRP+Y LG LK FP+ P +ALTATA + ++D
Sbjct: 139 ENLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKHHFPHVPFMALTATADDATRKD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMD-CEKVAERLQV-----------GLSYGHFFLLKEF 614
++ L L ++ SF+RPN+ D EK QV G+ Y E
Sbjct: 195 ILSRLHLNEPHVYLGSFDRPNIRYDLVEKHKPVSQVIRYLESQKGNCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHF 314
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 315 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADITWLRRMLDE----------------- 357
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ G + + L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 358 KDDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPK 411
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T+ A+K + V Q F +++EV RG N +++H H+ +S +G G+ +
Sbjct: 412 HF---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRIREHGHDKISTYGLGRDHS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 469 HDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDMTLELAVPRLDT 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +K+D KLS D KL++ LR LR + E
Sbjct: 521 AARSAKAD-----------KLSNKHYDK--------------KLFAKLRKLRKSIADE-- 553
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
E + Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I +
Sbjct: 554 EEIPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHITHY 610
>gi|149191369|ref|ZP_01869621.1| ATP-dependent DNA helicase RecQ [Vibrio shilonii AK1]
gi|148834786|gb|EDL51771.1| ATP-dependent DNA helicase RecQ [Vibrio shilonii AK1]
Length = 611
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 224/655 (34%), Positives = 348/655 (53%), Gaps = 85/655 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FRP Q+E+I++ + G+D V+MPTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQEFRPGQQEVIDSAIEGNDGLVIMPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ +I R +N+ + KL+YV+PE+V D + R LE
Sbjct: 83 DQVDQLKADGVAAECINSTQSKETLIDIYRRMNNG--QLKLIYVSPERVLMHDFIER-LE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L L+ I +DEAHC+SQWGHDFRP+Y LG LK+ FP P++ALTATA + ++D+
Sbjct: 140 HLE----LSMIAVDEAHCISQWGHDFRPEYAALGRLKEWFPFVPMVALTATADDATRKDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKEFY 615
+ L L N + SF+RPN+ + EK Q+ G+ Y E
Sbjct: 196 IHRLNLNNPHEYLGSFDRPNIRYTLVEKHKPVSQIVRFLGENKGGSGIIYCGSRKKVEML 255
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ + +D+I ++ ATVAFGMGINKP+VRFV H
Sbjct: 256 TEKLCANHVRAAGYHAGMDMDERAYVQDAFQRDDIQVVVATVAFGMGINKPNVRFVAHFD 315
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ + E+ P
Sbjct: 316 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADIGWLRRMLDE--KEEGPQK--------- 364
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ + L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 365 ------QVESHKLNAMNAFAEAQT-CRRQVLLNYFGE-----YSEKPCGNCDICLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T A+K + V Q F S+++EV RG N +++H H+ L+ +G G+ +
Sbjct: 413 F---DATQEAQKALSCVYRVNQSFGISYVVEVLRGMSNIRIREHGHDKLTTYGIGRDHSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G ++ L P +
Sbjct: 470 DYWVSIFRQLIHKGLLSQNITR-------NSTLQLTE-EARPLLRGENSLELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD KL+ D KL++ LR LR + E +
Sbjct: 522 ARSAKSD-----------KLASKHYDK--------------KLFAKLRKLRKSIADE--D 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+ + +
Sbjct: 555 GLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGERKLEKYADPFLDLIQEHLTQ 609
>gi|330827839|ref|YP_004390791.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii B565]
gi|406674905|ref|ZP_11082097.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AMC35]
gi|423211489|ref|ZP_17198022.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AER397]
gi|328802975|gb|AEB48174.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii B565]
gi|404613569|gb|EKB10590.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AER397]
gi|404628413|gb|EKB25195.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AMC35]
Length = 611
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 228/651 (35%), Positives = 338/651 (51%), Gaps = 83/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q EII ++G D VL PTGGGKSL YQ+PAL+ PG+ +V+SPL+SL
Sbjct: 21 QAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCYQIPALLRPGLGVVVSPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ + E + + + KL+YV+PE++ + + + R
Sbjct: 81 MKDQVDSLRANGVAAVYINSALSREEMIQNFAAMRRG--EIKLVYVSPERLLQHEFMDRL 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E L IDEAHCVSQWGHDFRP+Y LG LKQ FP PV+ALTATA + +
Sbjct: 139 AELP-----LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRS 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGLSYGHFFLLKE 613
D++ L L + I SF+RPN+ ++ K AE+L G+ Y E
Sbjct: 194 DMLHRLELNDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KAA YH + QR Q + KD+I I+ ATVAFGMGI+KP+VRFV+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLEQRQQTQDAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK+IE Y+QE GRAGRDG + +L Y +D RV+ ++ N
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD----------------N 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ N + L+ L M ++ E CRR + L +FGE D K C NC
Sbjct: 358 IENPQQ-LQVEQYKLNVMAAFAEAQT-CRRQVLLNYFGEYND-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
KS+ D T+ A+K + V GQ F +++EV RGSLNQ +K H H+ LS +G GK
Sbjct: 411 KSY---DGTEDAQKALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQ 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ++R L+ + L + + + N+VL+ A
Sbjct: 468 SHEYWMSVIRQLIHKGLLTQNITR--------------------------NLVLQLTEA- 500
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + + DV K L +L P + + + N +L+ LR LR + ++
Sbjct: 501 -ARPVLRGDV---KLELAVPRLQPISSRKEKRNGLLDNANYDKRLFKELRGLRKQIAED- 555
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E V Y +F +ATL +++ +P TE+E+L ING+G K+ ++G ++ I
Sbjct: 556 -EEVPPYVVFNDATLVEMAQLMPMTEDEMLAINGVGHRKLERFGEAFMDLI 605
>gi|238756279|ref|ZP_04617594.1| ATP-dependent DNA helicase recQ [Yersinia ruckeri ATCC 29473]
gi|238705485|gb|EEP97887.1| ATP-dependent DNA helicase recQ [Yersinia ruckeri ATCC 29473]
Length = 609
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 222/653 (33%), Positives = 340/653 (52%), Gaps = 88/653 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q+EIINAT++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RETFGYQQFRPGQQEIINATLAGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 78 MKDQVDQLLAYGVAAGCLNSSQTREQQLAVM-----DGCRNGQIKLLYIAPERLVMEN-F 131
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QLE A + +DEAHC+SQWGHDFRP+Y+ LG LK++FP PV+ALTATA +
Sbjct: 132 LEQLEHWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKRRFPALPVIALTATADEA 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+V+ L L +I SF+RPN LW + +R + G+ Y +
Sbjct: 188 TRGDIVRLLDLNQPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 245
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 246 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 305
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E P
Sbjct: 306 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EDKPV--- 357
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
G + L M ++ E CRRL+ L +FGE A C NC
Sbjct: 358 ---------GAQQDVERHKLNAMGAFAEAQT-CRRLVLLNYFGEGQQQA-----CGNCDI 402
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 403 CLDPPQRYDGLGDAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREMGHDKLSVYGIGR 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+LR L+ L + + + S L++ ++ A ++ ++ L P
Sbjct: 463 EQTHEHWVSVLRQLIHLGLLSQNIAQ-------FSALQLTEA-ARPVLRAEISLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K S + G N KL++ LR LR +
Sbjct: 515 -IQSLKPRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIAD 550
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E E + Y +F +ATL +++++P ELL +NG+G+ K+ ++G + I
Sbjct: 551 E--ENIPPYVVFNDATLLEMAEQMPIKANELLSVNGVGQRKLERFGAPFMAVI 601
>gi|15603292|ref|NP_246366.1| RecQ protein [Pasteurella multocida subsp. multocida str. Pm70]
gi|18202817|sp|Q9CL21.1|RECQ_PASMU RecName: Full=ATP-dependent DNA helicase RecQ
gi|12721804|gb|AAK03511.1| RecQ [Pasteurella multocida subsp. multocida str. Pm70]
Length = 632
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 220/649 (33%), Positives = 349/649 (53%), Gaps = 82/649 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q E+I+AT+ G D V+M TG GKSL YQ+PAL G+TLVISPL+SL++
Sbjct: 33 VFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMK 92
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL I A +L+ + +TEQQ++ +L S KLLYV+PEKV +
Sbjct: 93 DQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSG--TLKLLYVSPEKVMTTSFF----- 145
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L + ++ + IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++D+
Sbjct: 146 HLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATADHATRQDI 205
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEFY 615
++ L L + ++ SF+RPN+ + EK + ++ + G+ Y + E
Sbjct: 206 LRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPMEQLCRFVLGQKGKSGIIYCNSRSKVERI 265
Query: 616 VVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
SL G A YH ++ +QR VQ+ + +D + ++ AT+AFGMGINK +VRFV+H
Sbjct: 266 AESLRNKGVSAQAYHAGLETSQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFD 325
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--RFN 732
LP+SIE Y+QE GRAGRD + VL+Y +D+ + ++ + P +P
Sbjct: 326 LPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILL-----EKPESPQRQIEALK 380
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ G E+ T CRRL+ L +FGE H +K C NC +
Sbjct: 381 LQAIGEFAESQT---------------CRRLVLLNYFGE-----HQQKPCQNCDICLDPP 420
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K++ + GQ+F +++ V RG NQ +K ++HE LS++G GK +K
Sbjct: 421 KQYDGLIDAQKVMSTIYRIGQRFGVHYVIAVLRGLSNQKIKDNQHEQLSVYGIGKDKSKE 480
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V+ ++ L++ ++ A ++ G Q + L P
Sbjct: 481 HWQSVIRQLIHLGFIKQ------VFDHFNATLQLTEN-AKPILRGEQPLSLAMP------ 527
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ S L+ ++P R ++ L++ LR LR + + E
Sbjct: 528 ----------RISSLTSVVAPQRYAIAQYDKD---------LFARLRFLRKQIADK--EN 566
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ AY +F +ATLQ +++ P T+ E+L ING+G K ++ ++ I+
Sbjct: 567 IPAYIVFNDATLQEMAQYQPTTKAEMLAINGVGATKFERFAQPFMQIIQ 615
>gi|378581806|ref|ZP_09830449.1| ATP-dependent DNA helicase [Pantoea stewartii subsp. stewartii DC283]
gi|377815544|gb|EHT98656.1| ATP-dependent DNA helicase [Pantoea stewartii subsp. stewartii DC283]
Length = 608
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 216/654 (33%), Positives = 345/654 (52%), Gaps = 78/654 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IIN ++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 QDTFGYQQFRPGQQAIINEALNGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ M +QQ ++ + + + KLLY+ PE++ + L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTMTREQQQNVMADCRNG--RVKLLYIAPERLMMDNFL--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
ESL A A + +DEAHC+SQWGHDFRP+Y LG ++Q+FP+ PV+ALTATA + +
Sbjct: 133 -ESL-AHWQPAMLAVDEAHCISQWGHDFRPEYGALGQMRQRFPDLPVMALTATADETTRL 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH ID AQRA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGIDSAQRARVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ + E+ P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLE----EKQP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE ++ C NC
Sbjct: 358 ----GPLQDIERHKLNAMNAFAEAQT-CRRLVLLNYFGEGR-----QQPCGNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D A+K + + GQ+F +I+EV RG+ N +++ H+ L ++G GK +
Sbjct: 408 KRYDGLVEAQKALSSIYRVGQRFGMGYIVEVLRGANNHRIREQGHDKLPVYGLGKENSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ + + + ++ S L++ ++ A ++ G ++L P I +
Sbjct: 468 HWVSVLRQLIHLGLVTQNI-------AMHSALQLTEA-ARPVLRGEVPLMLAVPRLITTR 519
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
S S G N KL++ LR LR + E E
Sbjct: 520 PKSSSSAKVYGG------------------------NYDRKLFAKLRKLRKAIADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y +F +ATL +++++P + ++L +NG+G K+ ++G L I+ + E
Sbjct: 554 IPPYVVFNDATLLEMAEQMPVSASDMLSVNGVGHRKLERFGKPFLLMIKEHLDE 607
>gi|359454206|ref|ZP_09243496.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|414070221|ref|ZP_11406208.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
gi|358048729|dbj|GAA79745.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|410807319|gb|EKS13298.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
Length = 607
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 228/668 (34%), Positives = 341/668 (51%), Gaps = 97/668 (14%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+K E K+VFG FR Q+ +I+A ++GHD VL+PTGGGKS+ YQ+PAL+ G+T+
Sbjct: 12 VRKPETVLKQVFGYSEFRDGQKAVIDAAINGHDSLVLLPTGGGKSVCYQIPALVLEGVTI 71
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ K LLYV PEKV
Sbjct: 72 VISPLISLMQDQVTQLQALGVKAAYVNNSLAREEQQLVYQQLHQGLIK--LLYVAPEKVL 129
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ D L R L LN ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTA
Sbjct: 130 QRDFLER-LSHLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTA 184
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE---- 613
TA + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 185 TADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKNQ 239
Query: 614 ---FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFG
Sbjct: 240 SGIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFG 299
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+ + +
Sbjct: 300 MGINKPNVRFVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFF-EDID 358
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
++ RFN M S+ E CRR + L +F E + +
Sbjct: 359 DEQRRRVEEQRFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQR 396
Query: 780 KTCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHR 835
+ C NC KSF D T A++ + V Q+F +I+E+ RG+ ++ +
Sbjct: 397 EPCGNCDICLNPPKSF---DGTLVAQQALSCVYRAEQRFGLGYIVELLRGANTSRIRDNN 453
Query: 836 HETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLII 895
H LS +G GK + ILR L+ + L +++
Sbjct: 454 HHELSTYGIGKDKSSEFWLSILRQLIHQGLLSQDIT------------------------ 489
Query: 896 GRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYS 955
Q LR A + S+ + A+ L + + D +Q N KL++
Sbjct: 490 --QGASLRLTEAARAILKSEYALQLAEPRLQAKHVY---QDKLAQ------FNYDKKLFA 538
Query: 956 SLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRL 1015
LR LR L + V Y +F + TL +++ +P + E L+++G+G K++KYG
Sbjct: 539 RLRALRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGAF 596
Query: 1016 LETIESTI 1023
L I + +
Sbjct: 597 LTAIRNYL 604
>gi|85818249|gb|EAQ39409.1| ATP-dependent DNA helicase RecQ [Dokdonia donghaensis MED134]
Length = 701
Score = 345 bits (885), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 219/659 (33%), Positives = 337/659 (51%), Gaps = 84/659 (12%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
P + L K FG FRPNQ+EII + +G D V+MPTGGGKS+ +QLPAL G
Sbjct: 6 LPTQQDLHKLLKTHFGYDGFRPNQQEIIESICNGQDALVIMPTGGGKSMCFQLPALALDG 65
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPE 494
+ LVISPL++L++DQ+ L I A + + E Q++L +L + L+YV PE
Sbjct: 66 VALVISPLIALMKDQVDALRANGIKAAYYNSTQPPEETQKVLSDLQHN--ALDLIYVAPE 123
Query: 495 KVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLA 554
+ D +L ++ ++ I IDEAHC+S WGHDFRP Y LG LK+++P TP++A
Sbjct: 124 SLQLLDPVLSTIK-------ISLIAIDEAHCISSWGHDFRPAYTQLGYLKRRYPETPLVA 176
Query: 555 LTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--GHFFLLK 612
LTATA S ++D+ Q L + + SF+RPNL++D +R + L + H F
Sbjct: 177 LTATADRSTQDDIAQQLSIPQAKKYISSFDRPNLYLDVRPGQKRNEQILDFLEDHPFESG 236
Query: 613 EFYVVSLEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
Y +S + GH AA YH + QR+ VQ+ + D IICAT+AFGMG
Sbjct: 237 IIYCLSRKSTENLAAKLKSNGHNAAAYHAGMSAEQRSKVQEDFINDTTPIICATIAFGMG 296
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
I+K +VR+VIH+++PK++EGY+QE GRAGRDG S VL+YSY+D ++++ I
Sbjct: 297 IDKSNVRWVIHYNMPKNLEGYYQEIGRAGRDGLPSHTVLFYSYADTMQLRQFI------- 349
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
+ + + L RM Y E + CRR + + +FGE F S C
Sbjct: 350 -------------DGAKNADYQMAKLDRMQQYAEA-LSCRRKVLINYFGE-FLSQDC-GN 393
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CD C ++ D T +K++ V Q+ + +++V RGS N V ++ +
Sbjct: 394 CDICKNAPAYF--DGTVLTQKVLSGVARMQQKEAMGTVIDVLRGSQNAQVYDKGYQNIKT 451
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+GA K ++ + + + ++ + L ++S L+ V
Sbjct: 452 YGAAKDVSWRDLQQYVIQMINQGLLEIRFRES----------------GRLLLTPLSKEV 495
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
L I K SK P ++ P +P+ L+ LR LR
Sbjct: 496 LYDGKKIQLAKPSKEKAKPI-----------TKERKPKKPK--------GSLFEKLRELR 536
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
L +EA V AY +F +A+L+ + + P T+++ L+I G+G+AK+ KYG L+ I+
Sbjct: 537 AELAREA--NVAAYIVFSDASLKDMEDQEPVTQKQFLDIQGVGQAKMEKYGADFLKLIK 593
>gi|429327654|gb|AFZ79414.1| ATP-dependent DNA helicase, RecQ family member protein [Babesia
equi]
Length = 809
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 186/446 (41%), Positives = 260/446 (58%), Gaps = 40/446 (8%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
+N +W+ +FPWTK + N+ VF N +FRPNQ E IN + G+D FV++PTGGGKSL
Sbjct: 140 ANSDEWNR-EFPWTKLVHEINRDVFKNVAFRPNQLEAINCLLDGNDTFVVIPTGGGKSLC 198
Query: 425 YQLPALI-------CPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILR 477
+QLPA++ C +T+VI PL+SLI DQ+ L I L G + W+E++ I
Sbjct: 199 FQLPAVVDHYMQKNC--LTVVIMPLISLIHDQMKRLKNLGIGCRALVGELTWSERKGIYD 256
Query: 478 ELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDY 537
+++ + +L++TPE + S LL L L+ L+R V+DE HCVSQWG+DFRP+Y
Sbjct: 257 DISENTESVSILFLTPEGLTTSKNLLDLLHQLDKARRLSRFVLDEVHCVSQWGNDFRPNY 316
Query: 538 QGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----- 592
+G++K FP+ PV ALTATAT SV DV++ L L N IIF+ FNR NL +
Sbjct: 317 GAMGLIKHDFPHLPVCALTATATESVMRDVIKKLRLRNPIIFKSDFNRKNLRYEVIKKDK 376
Query: 593 ----------EKVAERL--QVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFV 640
E + R Q G+ Y E +L + +YH I+ R +
Sbjct: 377 QSKRAVNGLIELITNRFMDQCGIVYCLSCREAEDVANALSSHVTSCYYHAQINMVTRNRI 436
Query: 641 QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVL 700
W + +N+I AT+AFGMGI+KPDVRFVIH S+PKS+E Y QE GRAGRDG+ S CVL
Sbjct: 437 YHDWIEGRVNVIVATLAFGMGIDKPDVRFVIHFSMPKSLENYFQESGRAGRDGKLSVCVL 496
Query: 701 YYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDC 760
Y + D R+ ++QGV+ Q + N + +L MV+YCE+++ C
Sbjct: 497 LYEFHDSQRLL-TLTQGVSAQG-----------SQESEQQMVNRKQILSMVNYCEDNITC 544
Query: 761 RRLLQLVHFGEKFDSAHCKKTCDNCS 786
RR+L L +FG+ F+ A C CDNCS
Sbjct: 545 RRILLLKYFGQDFN-AKCDVPCDNCS 569
>gi|95930254|ref|ZP_01312992.1| ATP-dependent DNA helicase RecQ [Desulfuromonas acetoxidans DSM 684]
gi|95133717|gb|EAT15378.1| ATP-dependent DNA helicase RecQ [Desulfuromonas acetoxidans DSM 684]
Length = 598
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 224/650 (34%), Positives = 348/650 (53%), Gaps = 79/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FR Q++II ++G D FVLMPTGGGKSL YQ+PAL G+ +V+SPL+SL
Sbjct: 8 QNTFGFREFREPQQQIIETLIAGQDCFVLMPTGGGKSLCYQIPALHRQGVAIVVSPLISL 67
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A + ++ E +++L +L+ + LLYV PE++ D L R
Sbjct: 68 MKDQVDALNANGVSAACYNSSLAAQEARDVLSQLHRQ--QLDLLYVAPERLLSPDFLER- 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + +A I +DEAHCVSQWGHDFRP+Y LG L+ +FP+TP++ALTATA ++
Sbjct: 125 LHDIK----IALIAVDEAHCVSQWGHDFRPEYVQLGQLRDQFPDTPMIALTATADMQTRQ 180
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFFLL-----K 612
D+V+ L L + F SF+RPN+ +D +K +L+ L G + L +
Sbjct: 181 DIVERLRLHHARKFISSFDRPNIRYTVVDKQKPIVQLEQFLDQHRNEAGIVYALSRKRVE 240
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E ++ G AA YH + QR VQ+ + +D+I ++ ATVAFGMGI+K +VRFV+H
Sbjct: 241 EIAAKLVDRGIVAAAYHAGLPDRQRHEVQEAFLRDDIQVVVATVAFGMGIDKSNVRFVVH 300
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LPK+IE Y+QE GRAGRDG + +L + Y D + +I +G P R
Sbjct: 301 YDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIAIARGLIEKG------GNPDQVRIE 354
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L MVSY E + CRR L +FGE D C NC +
Sbjct: 355 L-----------HKLNAMVSYAEP-LTCRRRALLGYFGETLD-----HDCGNCDLCLNPP 397
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
E+ + T+ A+K++ V GQ+F + H+++V RGS Q V H+ LS +G G +
Sbjct: 398 ERYNATEDAQKVLSCVYRVGQRFGAKHVIDVLRGSSGQRVLDLGHDKLSTYGIGADQSSD 457
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R LV +L ++V SV+K+ + + ++ G+Q + L P T
Sbjct: 458 VWGGLIRQLVHLGYLYQDVAN-------YSVIKLTEL-SRTVLTGQQELTLARPRLKAVT 509
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K P R + +DL+ + L+ LR R + E +G
Sbjct: 510 K------------------KPVR-------KRAMDLDYNEDLFEVLRQRRKEIADE--QG 542
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
V + +F + +L ++ +P TEEE+++ING+GK K++ YG + ++ I++
Sbjct: 543 VPPFVVFSDNSLVEMAYYLPLTEEEMMKINGVGKHKMAHYGQQFMDAIDA 592
>gi|440494379|gb|ELQ76762.1| ATP-dependent DNA helicase [Trachipleistophora hominis]
Length = 838
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 202/507 (39%), Positives = 299/507 (58%), Gaps = 60/507 (11%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
++F SFRPNQ EIINA + DVFVLMPTGGGKSL Y LPA++ +T+VISPL+SLI
Sbjct: 336 QIFKLRSFRPNQEEIINAVLDEKDVFVLMPTGGGKSLCYFLPAVLTHNLTVVISPLLSLI 395
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILREL------NSDYCKYKLLYVTPEKVAKSD 500
+DQI LL+ NI + L+ M E+ + R L + + + K+L++TPE + +SD
Sbjct: 396 EDQIQELLRLNIASLTLNSAMSARERGVVFRALREGVRVGTAHKRIKILFLTPETLMQSD 455
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L R L+ LAR+VIDEAHCVSQWG+DFRPDY+ L ++K F T V+ALTATAT
Sbjct: 456 ALQRMLKGN-----LARVVIDEAHCVSQWGNDFRPDYKKLRMVKDVFGCT-VMALTATAT 509
Query: 561 ASVKEDVVQALGLVNC-----IIFRQSFNRPNL-WMDCEKVAERLQVGLSYGHFFLLKE- 613
V++D+ + L + + FR SFNR NL ++ K + + +S+ + + +
Sbjct: 510 RRVEQDIKECLFGAHAPNSPVLTFRSSFNRKNLKYIVLPKKKDTITQIVSFINTYYPRSP 569
Query: 614 --FYVVSL----ECGHK------AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
YV+S E HK + +YH + +R VQ++WS DE+ +I ATVAFGMG
Sbjct: 570 GIIYVISKREAEEVSHKLNGHITSLYYHAGLTKKERNAVQRKWSTDEVRVIVATVAFGMG 629
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
INK +VR+VIHHS+P S+E Y+QE GRAGRDG +S+C+L+YSY+D R+ +++ + V
Sbjct: 630 INKRNVRYVIHHSMPYSLENYYQETGRAGRDGLQSTCILFYSYADKNRLNNLLKRQVER- 688
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
+NL R+V YCEN +CRR L L +F E+ + C
Sbjct: 689 -----------------------DNLSRVVQYCENVTECRRKLILQYFNERLTDS-CTG- 723
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CDNC + +++D T A+ + +V ++ S +HI+ V RGS ++ V + +
Sbjct: 724 CDNCQNTCNRVQRDCTQCARAIARVVH-EHERLSLTHIVNVLRGSRSKAVCAYAGS--AC 780
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLME 868
+G + + +S R++R +V + L E
Sbjct: 781 YGVLRDVRRSLLERVVRVMVGQGMLKE 807
>gi|37200123|dbj|BAC95951.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus YJ016]
Length = 625
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 222/657 (33%), Positives = 345/657 (52%), Gaps = 85/657 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG +FR Q+ +I A + G D V+MPTGGGKSL YQ+PAL+ PGITLVISPL+SL+
Sbjct: 36 QVFGYQTFREGQQSVIEAAVEGKDSLVIMPTGGGKSLCYQIPALVRPGITLVISPLISLM 95
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + + +++ + KL+YV+PE+V D + R L
Sbjct: 96 KDQVDQLKANGVAAECVNSTLSRDALLSVYNRMHAG--QLKLVYVSPERVLMRDFIER-L 152
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
E+L LA I +DEAHC+SQWGHDFRP+Y LG LK FP+ P +ALTATA + ++D
Sbjct: 153 ENLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKHHFPHVPFMALTATADDATRKD 208
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMD-CEKVAERLQV-----------GLSYGHFFLLKEF 614
++ L L ++ SF+RPN+ D EK QV G+ Y E
Sbjct: 209 ILSRLHLNEPHVYLGSFDRPNIRYDLVEKHKPVSQVIRYLESQKGNCGIIYCGSRKKVEM 268
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 269 LTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHF 328
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 329 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADITWLRRMLDE----------------- 371
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ G + + L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 372 KDDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPK 425
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T+ A+K + V Q F +++EV RG N +++H H+ +S +G G+ +
Sbjct: 426 HF---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRIREHGHDKISTYGLGRDHS 482
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 483 HDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDMTLELAVPRLDT 534
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +K+D KLS D KL++ LR LR + E
Sbjct: 535 AARSAKAD-----------KLSNKHYDK--------------KLFAKLRKLRKSIADE-- 567
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
E + Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I +
Sbjct: 568 EEIPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHITHY 624
>gi|119476327|ref|ZP_01616678.1| ATP-dependent DNA helicase RecQ [marine gamma proteobacterium
HTCC2143]
gi|119450191|gb|EAW31426.1| ATP-dependent DNA helicase RecQ [marine gamma proteobacterium
HTCC2143]
Length = 610
Score = 345 bits (885), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 225/651 (34%), Positives = 336/651 (51%), Gaps = 85/651 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
+FG SFR +Q EII++ ++G+D VLMPTGGGKS+ YQ+PAL+ G+ ++ISPL++L+Q
Sbjct: 17 IFGYPSFRGHQEEIIDSIVAGNDALVLMPTGGGKSMCYQIPALVRDGVGIIISPLIALMQ 76
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDV--LLRQ 505
DQ+ + Q + A FL+ + EQ+ + ++L + LLYV PE++ + + LL Q
Sbjct: 77 DQVDAMQQLGVHAAFLNSTLTVMEQRRVEQQLQDG--QLDLLYVAPERLLQQNTFQLLSQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E +A IDEAHCV+QWGHDFR DY GLG+L FP+ P +ALTATA + +
Sbjct: 135 CE-------IALFAIDEAHCVAQWGHDFRADYLGLGVLHDNFPDVPRVALTATADSRTQN 187
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSY--------GHFFLLKEFYV 616
++ Q L L + F F+RPN+ + K A + Q+ LS+ G + L V
Sbjct: 188 EIQQRLTLTDAHCFISGFDRPNIRYAIANKTAPKKQL-LSFLRNRLHEAGIVYCLSRKKV 246
Query: 617 VS-----LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
S E G+ A YH + RA+ Q ++ +++ II AT+AFGMGI+KPDVRFV
Sbjct: 247 ESTAQWLCEQGYTALPYHAGLSSELRAYHQSRFLREDAVIIVATIAFGMGIDKPDVRFVA 306
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKSIE Y+QE GRAGRDG S + Y D +R++ M + A
Sbjct: 307 HLDLPKSIEAYYQETGRAGRDGLPSDAWMVYGLQDVVRMQQMQGESTA------------ 354
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
S + T L M+ CE CRR + L +FG++ C CDNC
Sbjct: 355 ----SDQFKRTERHKLDAMLGLCEV-TSCRRQVLLNYFGDQAPD-QCG-YCDNCQIPPE- 406
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D ++ A+K++ + +GQ+F HI+++ RGS + +++H H+ LS +G G +++
Sbjct: 407 -TWDASEAAQKVLSSIYRSGQRFGVVHIVDILRGSDTEKIRQHGHQQLSTYGIGSDISEV 465
Query: 852 EASRILRHLVIEDFL---MEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
++R LV+ L +E + S VL+ Q + R++ V+ FPS
Sbjct: 466 GWRSVIRQLVVRGLLKVDLEGYSGLQLEDSCRPVLRGEQR-----LFLRKDEVVSFPSKQ 520
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
KSDV P +L+ +LR R L E
Sbjct: 521 RKRSSKKSDVLPEH----------------------------QQLWDALRACRKRLADEF 552
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V Y IF +ATL + + P + ELL I GIG +K+ +YG ++ I
Sbjct: 553 N--VPPYVIFHDATLLEMLESRPMSSMELLTITGIGDSKLDRYGRDFIDVI 601
>gi|425066310|ref|ZP_18469430.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida P1059]
gi|404381895|gb|EJZ78360.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida P1059]
Length = 632
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 220/649 (33%), Positives = 344/649 (53%), Gaps = 82/649 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q E+I+AT+ G D V+M TG GKSL YQ+PAL G+TLVISPL+SL++
Sbjct: 33 VFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMK 92
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL I A +L+ + +TEQQ++ +L S KLLYV+PEKV +
Sbjct: 93 DQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSG--TLKLLYVSPEKVMTTSFF----- 145
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L + ++ + IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++D+
Sbjct: 146 HLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATADHATRQDI 205
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEFY 615
++ L L + ++ SF+RPN+ + EK + ++ + G+ Y + E
Sbjct: 206 LRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPMEQLCRFVLGQKGKSGIIYCNSRSKVERI 265
Query: 616 VVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
SL G A YH + AQR VQ+ + +D + ++ AT+AFGMGINK +VRFV+H
Sbjct: 266 AESLRNKGVSAQAYHAGRETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFD 325
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--RFN 732
LP+SIE Y+QE GRAGRD + VL+Y +D+ + ++ + P +P
Sbjct: 326 LPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILL-----EKPESPQRQIEALK 380
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ G E+ T CRRL+ L +FGE H +K C NC +
Sbjct: 381 LQAIGEFAESQT---------------CRRLVLLNYFGE-----HQQKPCQNCDICLDPP 420
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K++ + GQ+F +++ V RG NQ +K ++HE LS++G GK +K
Sbjct: 421 KQYDGLIDAQKVMSTIYRIGQRFGVHYVIAVLRGLSNQKIKDNQHEQLSVYGIGKDKSKE 480
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V+ ++ L++ ++ A ++ G Q + L P + T
Sbjct: 481 HWQSVIRQLIHLGFIKQ------VFDHFNATLQLTEN-AKPILRGEQPLSLAMPRISSLT 533
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ PQ + L++ LR LR + + E
Sbjct: 534 SVVA-------------------------PQRYAIVQYDKDLFARLRFLRKQIADK--EN 566
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ AY +F +ATLQ +++ P T+ E+L ING+G K ++ ++ I+
Sbjct: 567 IPAYIVFNDATLQEMAQYQPTTKAEMLAINGVGATKFERFAQPFMQIIQ 615
>gi|39937884|ref|NP_950160.1| DNA helicase [Rhodopseudomonas palustris CGA009]
gi|39651744|emb|CAE30266.1| DNA helicase [Rhodopseudomonas palustris CGA009]
Length = 616
Score = 345 bits (885), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 228/646 (35%), Positives = 335/646 (51%), Gaps = 71/646 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q I+ G D VLMPTGGGKSL YQLPAL+ G +V+SPL++L++
Sbjct: 24 VFGLPSFRGQQEAIVRHVADGGDALVLMPTGGGKSLCYQLPALLREGCGVVVSPLIALMR 83
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL++ + A L+ + + E +I ++L + LLYV PE++ L
Sbjct: 84 DQVAGLLESGVRAAALNSTLSYDEANDIEQQLLKG--ELDLLYVAPERLLTPRCL----- 136
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
SL AR ++ IDEAHCVSQWGHDFRP+Y GL + +KFPN P +ALTATA A + ++
Sbjct: 137 SLLARAKISLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPNVPRIALTATADALTRREI 196
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGH------FFLLKEFYVVS 618
+ L L + F SF+RPN+ +D + +L+ + H + L V
Sbjct: 197 AERLSLTDAPCFVSSFDRPNIRYSIVDKQNAPAQLKAFIDDRHRGHSGVVYCLSRAKVED 256
Query: 619 L-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ + G A YH + P RA Q ++ ++ +I AT+AFGMGI+KPDVRFV H
Sbjct: 257 IAETLSKSGLTALPYHAGLPPDVRARNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHL 316
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S + Y SD ++ + MI + + G + F
Sbjct: 317 DLPKSIEAYYQETGRAGRDGKPSEAWMAYGLSDIVQQRRMIDE--------SSGSDAFKR 368
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+ G+ L +V CE+ CRR L +FGE C CDNC I
Sbjct: 369 VSMGK--------LDALVGLCES-TGCRRTRLLGYFGETAQHESC-GNCDNCLTPPKVI- 417
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D T A+KL+ TGQ+F + H+++V G L V + H+ LS+ G G + +
Sbjct: 418 -DGTVPAQKLLSCAYRTGQRFGAQHLIDVLLGRLTDRVTQFGHDKLSVFGIGGEFGEKQW 476
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
++R LV L + S+ +G+ LK+ ++ + ++ G V+LR +
Sbjct: 477 RAVIRQLVSLGHLAPD---SEAFGA----LKLTET-SRAVLKGETQVMLREQTGRPPRAK 528
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
S+ +G L+ G ++ +T P L+++L+ R+ + K GV
Sbjct: 529 SR------RGDLVGG----AQRETSGDP----------ALFAALKAWRSEVAK--ARGVP 566
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
AY + +ATL L+ PRT +EL I GIG K+ YG LL I
Sbjct: 567 AYVVLHDATLDGLAAAKPRTLDELRGIAGIGDKKLDHYGAALLAVI 612
>gi|197120051|ref|YP_002140478.1| ATP-dependent DNA helicase RecQ [Geobacter bemidjiensis Bem]
gi|197089411|gb|ACH40682.1| ATP-dependent DNA helicase RecQ [Geobacter bemidjiensis Bem]
Length = 599
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 232/653 (35%), Positives = 348/653 (53%), Gaps = 83/653 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q+EI+ +SG D FVLMPTGGGKSL YQ+PAL PG LVISPL+SL++
Sbjct: 12 VFGFKSFRSPQQEIVETVLSGRDAFVLMPTGGGKSLCYQVPALCFPGTALVISPLISLMK 71
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + I A + + E + +L +L++ + KLLYV PE++ SD L +++
Sbjct: 72 DQVDALRENGISAACYNSALGEAEARRVLAQLHAG--ELKLLYVAPERLL-SDGFLERIK 128
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L ++ IDEAHCVSQWGHDFRP+Y LG+L++ FP P++ALTATA A + D+
Sbjct: 129 QLP----ISLFAIDEAHCVSQWGHDFRPEYAQLGVLREIFPEIPMIALTATADAQTRGDI 184
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFFLLKEFYVVSL 619
+ LGL + F+RPN+ +D K +L LS G + L V +
Sbjct: 185 LSRLGLQGATCYCAGFDRPNIRYSVIDKNKPFSQLTGFLSSRKDEAGIVYALSRKRVEEV 244
Query: 620 E-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
G KAA YH + +R VQ + KD+I I+ ATVAFGMGI+K +VRFV+H+
Sbjct: 245 AKKLCAAGIKAAAYHAGLPDKERHRVQDAFLKDDIKIVVATVAFGMGIDKSNVRFVVHYD 304
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGV-AEQSPFTPGHNRFNV 733
+PKSIE Y+QE GRAGRDG + +L + Y D + +I G AEQ NR
Sbjct: 305 MPKSIESYYQETGRAGRDGLPADALLLFGYGDVAVARGLIGNGGNAEQ-------NR--- 354
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+E + N M+ + E CRR + L +FG++ + + C NC +S E
Sbjct: 355 ------IELHKLNC--MIGFAEAQT-CRRRVLLGYFGDRLE-----QDCGNCDICESPPE 400
Query: 794 K-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D T+ A+K + V GQ+F H+++V RGS N +++ +H+ LS G GK ++
Sbjct: 401 RFDATEDAQKALSCVYRVGQRFGVGHVIDVLRGSQNHRIQELKHDQLSTFGIGKQHSQEF 460
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+LR L+ +L +++ SVLK+ + L + + R TK
Sbjct: 461 WGNLLRQLIHLGYLEQDLAN-------FSVLKLTEGARPLLRGELRLELAR----PRDTK 509
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+ + K S +R PS L+ LR LR + E + V
Sbjct: 510 VVE-------------KKSAARK--PS---------YDGALFQELRELRKGIADE--QQV 543
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ +F +ATL ++ ++P+ + ELL+I G+G+ K+++YG L I +++
Sbjct: 544 PPFVVFADATLAEMAAQLPKDKWELLKITGVGQHKMARYGDAFLRVIREHLEK 596
>gi|385786868|ref|YP_005817977.1| ATP-dependent DNA helicase RecQ [Erwinia sp. Ejp617]
gi|310766140|gb|ADP11090.1| ATP-dependent DNA helicase RecQ [Erwinia sp. Ejp617]
Length = 610
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 340/652 (52%), Gaps = 79/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ II +++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ S +LLY+ PE++ D L Q
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSG--TVRLLYIAPERLMM-DNFLEQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N A + +DEAHC+SQWGHDFRP+Y LG L+Q+ P+ PV+ALTATA + +
Sbjct: 135 LTHCNP----AMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ + L L + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIARLLRLNDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D A RA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGMDNAHRAHVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L Y +D ++ + +
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCMEE---------------- 354
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A CDNC
Sbjct: 355 -KTQGPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQQA-----CDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + GQ+F +I+E+ RG+ NQ ++ +H+ L ++G G+ L+
Sbjct: 408 RRYDGLLEAQKALSCIYRVGQRFGMGYIVEILRGANNQRIRDMQHDKLPVYGIGRDLSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ +LR L+ + + + ++ S L++ ++ A ++ G +++L P + S
Sbjct: 468 HWTSVLRQLIHLGLVTQNI-------AMYSALQLTEA-ARPVLRGDVSLLLAVPR-LASV 518
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K T S Q N KL++ LR LR + E +
Sbjct: 519 K------------------------TRSSSQKSFGGNYDRKLFAKLRKLRKAIADE--DN 552
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++++P T E+L +NG+G K+ ++G L I+ I
Sbjct: 553 LPPYVVFNDATLIEMAEQMPITASEMLSVNGVGHKKLERFGKPFLLMIKEHI 604
>gi|260775110|ref|ZP_05884009.1| ATP-dependent DNA helicase RecQ [Vibrio coralliilyticus ATCC BAA-450]
gi|260609027|gb|EEX35187.1| ATP-dependent DNA helicase RecQ [Vibrio coralliilyticus ATCC BAA-450]
Length = 611
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 222/653 (33%), Positives = 344/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL++
Sbjct: 23 VFGYQSFRDGQQEVIEAAVNGQDSLVIMPTGGGKSLCYQVPALVRGGLTLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ +M E + + S + KL+YV+PE+V D + R LE
Sbjct: 83 DQVDQLKANGVSAECVNSSMPRDELISVYNRMQSG--QLKLVYVSPERVLMRDFIER-LE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
SL+ L+ I +DEAHC+SQWGHDFRP+Y LG +KQ FP+ P +ALTATA + + D+
Sbjct: 140 SLS----LSMIAVDEAHCISQWGHDFRPEYASLGQIKQHFPHVPFMALTATADDATRNDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKEFY 615
+ L L I SF+RPN+ + EK QV G+ Y E
Sbjct: 196 MHRLQLNEPHIHLSSFDRPNIRYTLVEKHKPISQVIRFLDTQKGNCGIIYCGSRKKVEMV 255
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH ++ +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 256 TEKLCNNHIRAASYHAGLEADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 315
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 316 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE-----------------K 358
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + L M ++ E CRR + L +FGE + ++ C NC K
Sbjct: 359 DDGPQKQVEAHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREQPCGNCDICLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N ++++ H+ L+ +G G+ +
Sbjct: 413 F---DATEQARKALSCVYRVNQSFGMGYVVEVLRGMQNIRIRENGHDKLTTYGIGRENSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 470 DYWVSIFRQLIHKGMLFQNITR-------NSTLQLTE-EARPLLRGDTALELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD +K N KL++ LR LR + E +
Sbjct: 522 ARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKAIADE--D 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+ I
Sbjct: 555 GLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEHI 607
>gi|253991584|ref|YP_003042940.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
gi|211638462|emb|CAR67084.1| atp-dependent dna helicase recq (ec 3.6.1.-) [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253783034|emb|CAQ86199.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
Length = 608
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 225/657 (34%), Positives = 346/657 (52%), Gaps = 83/657 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q+++IN + G D V+MPTGGGKSL YQ+PALI G+TLV+SPL+SL
Sbjct: 18 RETFGYQQFRPGQQQVINTILEGRDCLVIMPTGGGKSLCYQIPALIQEGVTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q +++R K LLY+ PE++ + L +
Sbjct: 78 MKDQVDQLQANGVAADCLNSTQAREQQIDVIRRCRQGMVK--LLYIAPERLMMDNFLEQL 135
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE A +LA +DEAHC+SQWGHDFRP+Y+ LG L+Q+FP PV+ALTATA + +
Sbjct: 136 LEWQPA--ILA---VDEAHCISQWGHDFRPEYRALGQLRQRFPTLPVIALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L N +I SF+RPN LW+ A++ + G+ Y +
Sbjct: 191 DIVRLLNLNNPLIHISSFDRPNIRYTLIEKYKPLDQLWLFIR--AQKGKSGIIYCNSRSK 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D QRA VQ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEETSERLQKRGLSVAPYHAGLDNNQRARVQDAFQRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H ++P++IE Y+QE GRAGRDG + VL+Y +D + ++ + E+ P
Sbjct: 309 VHFNIPRNIESYYQETGRAGRDGLPAEAVLFYDPADMVWLRRCL-----EEKPV------ 357
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIK 789
G + L M ++ E CRRL+ L +FGE + + CD C K
Sbjct: 358 ------GTQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGE--NKQNLCGNCDICLDPPK 408
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D A+K + V GQ+F +I+EV RGS NQ ++ H+ L ++G GK +
Sbjct: 409 NY---DGLVDAQKALSCVYRVGQRFGIGYIVEVLRGSNNQRIRDMGHDRLPVYGIGKEQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ +LR L+ F+ + + S L++ ++ L R V+L
Sbjct: 466 QEYWISVLRQLIHLGFISQNITN-------YSALQLTEAARPVL---RGEVLL------- 508
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
KL+ + KG SQ N KL++ LR LR + E
Sbjct: 509 --KLAVPRIQSLKGR--------------SQQSKSYSGNYDRKLFAKLRKLRKSIADE-- 550
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
+ + +F + TL +S++ P T +E+L ING+G+ K+ ++G + I ++EF
Sbjct: 551 NNIPPFVVFNDVTLIEMSEQCPVTADEMLLINGVGQRKLERFGGVFMALIHEHLEEF 607
>gi|170078505|ref|YP_001735143.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
gi|169886174|gb|ACA99887.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
Length = 712
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 230/667 (34%), Positives = 340/667 (50%), Gaps = 85/667 (12%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPG 434
FP LEA K FG +FR Q+ +I A + D+ LMPTG GKSL +QLPAL+ PG
Sbjct: 4 FP---SLEAALKHFFGYDNFRHGQKAVITAALENRDILALMPTGAGKSLCFQLPALLKPG 60
Query: 435 ITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPE 494
+T+VISPL++L+QDQ+ L I ATFL+ + + + ++ + + KLLYV PE
Sbjct: 61 LTVVISPLIALMQDQVDALTDNGIGATFLNSTLNLDQARSRIQAIFNG--NIKLLYVAPE 118
Query: 495 KVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLA 554
++ ++ + L ++ L V+DEAHCVS+WGHDFRP+Y+ L +++++P TP A
Sbjct: 119 RLF-NEGFQQLLTDVDQTIGLTGFVVDEAHCVSEWGHDFRPEYRQLSRIRRRYPRTPCQA 177
Query: 555 LTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD-------------CEKVAERLQV 601
TATAT V+ED++ L L N SFNRPNL+ + C R Q
Sbjct: 178 FTATATQRVREDIIDQLALQNPSFHCTSFNRPNLYYEVLPKVRKSYTQLLCYVRQRRGQP 237
Query: 602 GLSY-GHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGM 660
G+ Y + E + G KA YH + RA Q+Q+ +D++ ++ ATVAFGM
Sbjct: 238 GIIYCSSRKKVDELADRLKQDGVKALPYHAGLADRLRADYQEQFIRDDVPVMVATVAFGM 297
Query: 661 GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAE 720
GINKPDVRFV+H+ LP ++E Y+QE GRAGRDG+ + C L+Y D R ++ I E
Sbjct: 298 GINKPDVRFVVHYDLPTNLERYYQESGRAGRDGEPAHCTLFYRAGDIKRAEYFIELKEDE 357
Query: 721 QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKK 780
Q + L +M+ Y E +DCRR +QL +FGE+F C
Sbjct: 358 QEK-----------------RIAYQQLQKMIDYAEG-IDCRRTIQLSYFGEQF-PGDC-G 397
Query: 781 TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
CDNC + +D T A+K + V +++ ++I++V RGS + + ++ H LS
Sbjct: 398 GCDNCQNPRPI--EDWTIEAQKFLSCVARCRERYGMTYIIDVLRGSKKEKIIQNGHHQLS 455
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
+G G K + R L+ + + E SD Y VLK+N A + I RQ
Sbjct: 456 TYGIGLDHTKEAWKNLGRSLLYQGLMTE---TSDGY----RVLKLN---ARSWEILRQQK 505
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK-LYSSLRM 959
+ K++ R T + + L A+ L+ LR
Sbjct: 506 TV--------------------------KIAVERRQTAQEILGISESRLDAEILFGQLRQ 539
Query: 960 LRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
LR L V Y IF +ATL+ ++ R PRT+ + I+G+ AK +YG E
Sbjct: 540 LRKQLAD--ANWVAPYMIFSDATLRQMATRRPRTQADFCLISGVTSAKYQRYG----EPF 593
Query: 1020 ESTIKEF 1026
+ I+EF
Sbjct: 594 LAAIQEF 600
>gi|448239974|ref|YP_007404027.1| ATP-dependent DNA helicase [Serratia marcescens WW4]
gi|445210338|gb|AGE16008.1| ATP-dependent DNA helicase [Serratia marcescens WW4]
Length = 614
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 218/650 (33%), Positives = 343/650 (52%), Gaps = 82/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 22 RDTFGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A + EQ +++ + K+LY+ PE++ L
Sbjct: 82 MKDQVDQLLAYGVSAACYNSTQTREEQLDVMAGCRNG--TIKMLYIAPERLMMESFL--- 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA + +
Sbjct: 137 --SLLDHCPPAMLAVDEAHCISQWGHDFRPEYRALGQLKQRFPSMPVIALTATADEATRG 194
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + ++ SF+RPN LW + +R + G+ Y +
Sbjct: 195 DIVRLLSLQDPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNSRAK 252
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 253 VEDTAARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFV 312
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 313 VHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EEKP------- 360
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G+ L+ L M ++ E CRRL+ L +FGE H + C NC
Sbjct: 361 -----AGQQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGE---GKH--ENCGNCDICLD 409
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D + A+K + V GQ+F +I+EV RGS NQ ++++ H+ L ++G G+
Sbjct: 410 PPKRYDGLEDARKALSCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHDKLPVYGIGRDQT 469
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ +LR L+ F+ + + ++ S L++ ++ A ++ G + L P I
Sbjct: 470 TEHWTSVLRQLIHLGFITQNI-------AMHSALQLTEA-ARPVLRGEVALQLAVPR-IQ 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
S K S+S S Q N KL++ LR LR + E
Sbjct: 521 SLK-SRS----------------------SANQKSYGGNYDRKLFAKLRKLRKSIADE-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E + Y +F +ATL +++++P +LL +NG+G+ K+ ++G + I
Sbjct: 556 ENIPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAMI 605
>gi|294495880|ref|YP_003542373.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
gi|292666879|gb|ADE36728.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
Length = 599
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 224/652 (34%), Positives = 332/652 (50%), Gaps = 82/652 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG +FRP Q II ++ DVFVLMPTGGGKSL YQLP+L+ G+T+V+SPL+SL++D
Sbjct: 9 FGYDTFRPLQENIIQDVLNKKDVFVLMPTGGGKSLCYQLPSLLMEGVTVVVSPLISLMKD 68
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ LL I A +++ ++ +E + L K LLYV PE++A L
Sbjct: 69 QVDRLLSHGIAAAYMNSTLDNSEMSHVKDSLIRG--KLDLLYVAPERLAMPSTL------ 120
Query: 509 LNARELLARI-----VIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
+LLA++ +DEAHC+SQWGHDFRP+Y+ LG L+ FPN P++ALTATAT +V
Sbjct: 121 ----KLLAKVNVNLFAVDEAHCISQWGHDFRPEYRKLGALRSGFPNVPLIALTATATPAV 176
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFY 615
D+ + L +V + SFNR NL+ + + Q SY G +
Sbjct: 177 ARDITKQLNMVRSEKYVASFNRSNLYYEVKSGENADQQITSYLRSHPESCGIIYCQTRKS 236
Query: 616 VVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
V L + G AAFYH + R Q+++ I ++ ATVAFGMGI+K +VRFV
Sbjct: 237 VEGLAGRLKKLGVNAAFYHAGMSDELRHRAQEKFLDGTIRVVVATVAFGMGIDKSNVRFV 296
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H+ LP +E Y+Q+ GR GRDGQ C+L++ D+ + ++ I Q
Sbjct: 297 MHYDLPADLESYYQQTGRGGRDGQPCDCILFFKRGDWYKQQYFIEQ-------------- 342
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+S + E L M+ YCE+ V CRR + L +FGE +S CD C +
Sbjct: 343 ---MSSKKEREIALSKLRHMMDYCES-VTCRRKILLEYFGESAES-----DCDYCDVCLN 393
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ DVT+ A + + +K Q+F ++H+ V GS + + H L HG G H
Sbjct: 394 PPQQVDVTEDALIIFKCIKELNQKFGATHVASVIAGSKAKKIVSSGHHRLHCHGNGSHNP 453
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ + L FL +V G VLK+N+ L G ++ + +A N
Sbjct: 454 QDYWKDLSHRLSSLGFL-------EVKGGRYPVLKLNKKSRAVLNDGANVIIPQSSAATN 506
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+TK +SG+ S +P VD AKL+ LR LR K
Sbjct: 507 TTK------------KISGQSKASSKSSP------VDCEY-AKLFEKLRRLRLQFAKR-- 545
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ V Y +F + +L+ ++ P+T ++L I G+GK K+ KYG L I+S
Sbjct: 546 DNVPPYIVFADTSLKQMASSKPQTANQMLTITGVGKCKMEKYGDAFLSEIKS 597
>gi|389806094|ref|ZP_10203234.1| ATP-dependent DNA helicase RecQ [Rhodanobacter thiooxydans LCS2]
gi|388446093|gb|EIM02139.1| ATP-dependent DNA helicase RecQ [Rhodanobacter thiooxydans LCS2]
Length = 611
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 240/660 (36%), Positives = 345/660 (52%), Gaps = 83/660 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+ ++ G D VLMPTGGGKSL YQ+PAL+ G +V+SPL++L
Sbjct: 11 QSVFGYPSFRGQQQAVVEHLAEGGDALVLMPTGGGKSLCYQIPALLRQGTGIVVSPLIAL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L +A + A +L+ ++ Q+E+ R+L + + LLYV PE++ S L
Sbjct: 71 MQDQVDALREAGVAAAYLNSSLGAEAQREVERQLLAG--ELNLLYVAPERLLTSR-FLGL 127
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LES+ +A IDEAHCVSQWGHDFRP+Y+ L +L Q+FP P +ALTATA +E
Sbjct: 128 LESIE----VALFAIDEAHCVSQWGHDFRPEYRELVVLHQRFPQVPRIALTATADPRTRE 183
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEF----------- 614
++V+ L L F SF+RPN+ +VGL + L EF
Sbjct: 184 EIVERLALQEARRFVSSFDRPNIGY---------RVGLRHNAKRQLAEFLQGHQDESGIV 234
Query: 615 YVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y +S E G +A YH +D A RA Q+++ +++ ++ ATVAFGMGI+
Sbjct: 235 YCLSRRKVDDTAAWLAESGVEALPYHAGLDAATRAKNQQRFLREDGVVMVATVAFGMGID 294
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVRFV H LP+SIEGY+QE GRAGRDG + + Y SD + + MI+Q ++
Sbjct: 295 KPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTMSQMIAQSESDD-- 352
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
RV E+LL +Y E DCRR L L FGE A C CD
Sbjct: 353 -----------ERKRVERQKLESLL---AYAEA-TDCRRQLLLGAFGESHPGA-CGH-CD 395
Query: 784 NC-SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + K++ + T A+K + V TGQ+F S H+++V RG + V H LS
Sbjct: 396 NCVAPPKTW---NATVPAQKALSAVYRTGQRFGSGHVIDVLRGEETERVLSLDHHRLSTF 452
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G L + + + R L+ L + ++ YG+ L++ + L GRQ V L
Sbjct: 453 GIGADLDEKQWRSVFRQLLAAGLLEAD---AEGYGT----LRLTAASRSVLNGGRQ-VKL 504
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
R + + D S L S + E D L+ +LR LRT
Sbjct: 505 REDARPERASRRRRD------SKLVTSGKGSGGGSLGIEAYEQD------LWDALRALRT 552
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
L K+ +GV Y +F +ATL + + +P E+EL ++G+G+AK+ +YG L I +T
Sbjct: 553 QLAKQ--QGVPPYVVFHDATLLAMLRAMPANEDELAGVSGVGEAKLKRYGRDFLAVINAT 610
>gi|410627347|ref|ZP_11338088.1| ATP-dependent DNA helicase RecQ [Glaciecola mesophila KMM 241]
gi|410153093|dbj|GAC24857.1| ATP-dependent DNA helicase RecQ [Glaciecola mesophila KMM 241]
Length = 602
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/650 (32%), Positives = 345/650 (53%), Gaps = 82/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG FR Q ++I + GHDV VLMPTGGGKSL YQ+PAL+ G+T+V+SPL++L
Sbjct: 16 KTVFGYDEFRDGQHDVIEKILQGHDVLVLMPTGGGKSLCYQIPALVLEGLTIVVSPLIAL 75
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+ + + A +++ N+ E + R + +YKL+YV PE++ + D + R
Sbjct: 76 MKDQVDALVASGVSAAYINSNLSSEEMHNVYRGMQDG--RYKLIYVAPERLMQFDFIQR- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L SL LA +DEAHCVS WGHDFR +Y+ LG LKQ+FPN PV+ LTATA + +
Sbjct: 133 LHSLE----LALFAVDEAHCVSHWGHDFRKEYRRLGQLKQQFPNVPVVGLTATADITTRS 188
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-------WMDCEKVAERLQVGLSYGHFFL-----LKE 613
D++Q L L + IF+ SF+RPN+ + ++V + ++ G + + +
Sbjct: 189 DILQQLALQDPFIFKGSFDRPNIRYNQLFKYKATDQVIQYVKQQEGSGIIYCNSRKKVDD 248
Query: 614 FYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G A YH ++ R +Q+ + +D I+II ATVAFGMGINK +VRFV+H
Sbjct: 249 LSIALARQGINCAGYHAGLEGPIRDKIQRDFIQDNIDIIVATVAFGMGINKSNVRFVVHF 308
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LP+S+E Y+QE GRAGRDG + +L + D R++ I G +P R ++
Sbjct: 309 DLPRSVEAYYQETGRAGRDGMPAEALLLFDEKDAARIRQWIGMG---DNP-----ERLDI 360
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIKSFI 792
E + + + CRR + L +F E SAH CD C K F
Sbjct: 361 -------ELQKFAAMEAFAEAQT---CRRQVLLNYFSEY--SAHDCGNCDICLDPPKRF- 407
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+ ++ + GQ +S ++++V RG + + + H++LS GK + +
Sbjct: 408 --DGTVPAQMVLSCIYRLGQNVASQYVIDVLRGKKLKRIVEQGHDSLSTFAIGKDKSDAH 465
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS-AINST 911
I+ L+ + FL ++ + S+VLK+ + +A ++ G+ + L P I+S
Sbjct: 466 WHNIINQLIHKGFLRIDITQ-------SAVLKLTE-EARGVLAGKLELALAVPRLTIDSG 517
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K SK ++N KL++ L+ LR + + E
Sbjct: 518 KKSKLK----------------------------EMNYDRKLFAKLKHLRKSIAQR--ED 547
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
V + +F +ATL ++ ++P+++ + LE+NG+G+ K+ +YG L I +
Sbjct: 548 VPPFVVFSDATLADMADKLPQSKTDFLEVNGVGQTKLDRYGSEFLAAISA 597
>gi|423203715|ref|ZP_17190283.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AER39]
gi|404612493|gb|EKB09554.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AER39]
Length = 611
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 334/651 (51%), Gaps = 83/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q EII ++G D VL PTGGGKSL YQ+PAL+ PG+ +V+SPL+SL
Sbjct: 21 QAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCYQIPALLRPGLGVVVSPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ + E + + + KL+YV+PE++ + + + R
Sbjct: 81 MKDQVDSLRANGVAAVYINSALSREEMIQNFAAMRRG--EIKLVYVSPERLLQHEFMDRL 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E L IDEAHCVSQWGHDFRP+Y LG LKQ FP PV+ALTATA + +
Sbjct: 139 AELP-----LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRS 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGLSYGHFFLLKE 613
D++ L L + I SF+RPN+ ++ K AE+L G+ Y E
Sbjct: 194 DMLHRLELNDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KAA YH + QR Q + KD+I I+ ATVAFGMGI+KP+VRFV+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLEQRQQTQDAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK+IE Y+QE GRAGRDG + +L Y +D RV+ ++ N
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD----------------N 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ N + L+ L M ++ E CRR + L +FGE D K C NC
Sbjct: 358 IENPQQ-LQVEQYKLNVMAAFAEAQT-CRRQVLLNYFGEYND-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
KS+ D T+ A+K + V GQ F +++EV RGSLNQ +K H H+ LS +G GK
Sbjct: 411 KSY---DGTEDAQKALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQ 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ++R L+ + L + + + N+VL+ A
Sbjct: 468 SHEYWMSVIRQLIHKGLLTQNITR--------------------------NLVLQLTEAA 501
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
K K L +L P + + + N +L+ LR LR + ++
Sbjct: 502 RPVLRGK-----VKLELAVPRLQPISSRKEKRNGLLDNANYDKRLFKELRGLRKQIAED- 555
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E V Y +F +ATL +++ +P TE+E+L ING+G K+ ++G ++ I
Sbjct: 556 -EEVPPYVVFNDATLVEMAQLMPMTEDEMLAINGVGHRKLERFGEAFMDLI 605
>gi|402225561|gb|EJU05622.1| ATP-dependent DNA helicase, partial [Dacryopinax sp. DJM-731 SS1]
Length = 476
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/488 (40%), Positives = 270/488 (55%), Gaps = 42/488 (8%)
Query: 406 MSGHDVFVLMPTGGGKSLTYQLPALICP-----GITLVISPLVSLIQDQIMHLLQANIPA 460
M G DV+VLMPTGGGKSL YQLPA +C G+T+VISPL++L+ DQ+ H NI
Sbjct: 1 MGGKDVYVLMPTGGGKSLCYQLPA-VCKTGKTKGVTVVISPLLALMSDQVQHCRDLNIDV 59
Query: 461 TFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVI 520
L+ ++ E +E L S K L Y+TPE + L L L+ LAR VI
Sbjct: 60 VMLNSDISKDEARETESRLRSRN-KPALCYITPEGLEARGSLRNLLSYLHNDNNLARFVI 118
Query: 521 DEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFR 580
DEAHCVSQWG DFRP Y+ LGIL++++P P++ALTATA V ED++ LG+ C+
Sbjct: 119 DEAHCVSQWGFDFRPAYEKLGILRREYPGVPIMALTATANKRVSEDIIGCLGIKGCVRLS 178
Query: 581 QSFNRPNLWMDCEKVAERLQVGLSYG-------------HFFLLKEFYVVSLEC----GH 623
SFNRPNL K V YG + K+ V+ E G
Sbjct: 179 LSFNRPNLHYSVRKKPPGNLVANIYGFINSCHRNDAGIIYCLSRKKCEEVAAELRDTFGL 238
Query: 624 KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYH 683
A YH ++ R Q+ W +E +I AT+AFGMGI+KPDVR+VIHHSLPKS+EGY+
Sbjct: 239 PARHYHAGMNKNDRLRTQESWKHNEFKVIVATIAFGMGIDKPDVRYVIHHSLPKSLEGYY 298
Query: 684 QECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETN 743
QE GRAGRDG S C+LYY Y D K I + ++ SP R
Sbjct: 299 QETGRAGRDGNDSVCILYYHYGDTALFKKFIDE--SDASPEQKERQRM------------ 344
Query: 744 TENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKL 803
+L R+V YC+N DCRR L +F E+F +C K+CDNC + + +DV+D A+K
Sbjct: 345 --DLQRVVQYCQNITDCRRTQVLQYFDEEFAPENCHKSCDNCMSNEETLLEDVSDLARKA 402
Query: 804 VELVK--LTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLV 861
+ V+ L + + + +++FRG+ VK+ + L +G G + + + R+ +HLV
Sbjct: 403 LLTVQAALRSGRVTLAQAIDIFRGAHTAKVKQMGWDNLEAYGTGAGINREQVERLYQHLV 462
Query: 862 IEDFLMEE 869
D L E+
Sbjct: 463 SHDALREQ 470
>gi|28899781|ref|NP_799386.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus RIMD
2210633]
gi|153839097|ref|ZP_01991764.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus AQ3810]
gi|260362513|ref|ZP_05775439.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus K5030]
gi|260877193|ref|ZP_05889548.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus AN-5034]
gi|260897237|ref|ZP_05905733.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus Peru-466]
gi|260901369|ref|ZP_05909764.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus AQ4037]
gi|28808033|dbj|BAC61270.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus RIMD
2210633]
gi|149747393|gb|EDM58357.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus AQ3810]
gi|308088951|gb|EFO38646.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus Peru-466]
gi|308094160|gb|EFO43855.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus AN-5034]
gi|308107192|gb|EFO44732.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus AQ4037]
gi|308112667|gb|EFO50207.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus K5030]
Length = 611
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 221/659 (33%), Positives = 347/659 (52%), Gaps = 93/659 (14%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+E+I + + G D V+MPTGGGKSL YQ+PAL+ GITLVISPL+SL
Sbjct: 21 EEVFGYQTFRDGQQEVIESAVEGKDSLVIMPTGGGKSLCYQIPALVRSGITLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ M E + ++S + KL+YV+PE+V D + R
Sbjct: 81 MKDQVDQLKANGVAAECVNSTMSREELLSVYNRMHSG--QLKLVYVSPERVLMRDFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE+L LA I +DEAHC+SQWGHDFRP+Y LG LKQ F + P +ALTATA + +
Sbjct: 138 LENLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVPFMALTATADDATRR 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL----------------WMDCEKVAERLQVGLSYGHFF 609
D+++ L L + SF+RPN+ ++D +K G+ Y
Sbjct: 194 DILERLRLHEPHVHLGSFDRPNIRYNLVEKHKPISQIIRYLDTQKG----NCGIIYCGSR 249
Query: 610 LLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VR
Sbjct: 250 KKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 309
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV+H +P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE------------ 357
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
+ G + + L M ++ E CRR + L +FGE + +K C NC
Sbjct: 358 -----KDDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDIC 406
Query: 789 ----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
K F D T+ A+K + V Q F ++++EV RG N V++H H+ +S +G
Sbjct: 407 LDPPKHF---DATEEARKALSCVYRVNQSFGMTYVVEVLRGMQNIRVREHGHDKISTYGI 463
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ + I R L+ + L + + + +S L++ + +A L+ G ++ L
Sbjct: 464 GRDHSHDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVSLELAV 515
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P + + +KSD +K N KL++ LR LR +
Sbjct: 516 PRLDTAARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSI 550
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E +G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 551 ADE--DGLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|271502372|ref|YP_003335398.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech586]
gi|270345927|gb|ACZ78692.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech586]
Length = 614
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 218/650 (33%), Positives = 341/650 (52%), Gaps = 83/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q++IINA ++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 23 RETFGYQQFRPGQQDIINAAINGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISL 82
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +QQ + + KLLY+ PE+++ +D L Q
Sbjct: 83 MKDQVDQLQAYGVAAACLNSTQSREQQQAVFNACRRG--ELKLLYIAPERLS-TDGFLDQ 139
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + I IDEAHC+SQWGHDFRP+Y+ LG +KQ+ P P++ALTATA + ++
Sbjct: 140 LVHWNT----SLIAIDEAHCISQWGHDFRPEYRALGQIKQQCPTLPIVALTATADDTTRQ 195
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+ + L L + ++ SF+RPN LW+ +R + G+ Y +
Sbjct: 196 DIARLLDLRDPLVNVSSFDRPNIRYTLVEKFKPLDQLWLFIH--GQRGKSGIVYCNSRAK 253
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G YH +D +R+ VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 254 VEDLCARLQNRGLSVGAYHAGLDNDRRSQVQEAFLRDDLQVVVATVAFGMGINKPNVRFV 313
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + L+Y +D ++ + E+ P
Sbjct: 314 VHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCL-----EEKP------- 361
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G L+ L M ++ E CRRL+ L +FGE + +++C NC
Sbjct: 362 -----AGMQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGE-----NRQQSCGNCDICLD 410
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + V GQ+F +I EV RG+ NQ +++ H+ L ++G GK
Sbjct: 411 PPRRYDGLVDAQKALSCVYRVGQRFGIGYIAEVLRGANNQRIREFGHDKLPVYGLGKDKT 470
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ + ILR L+ L + + S L++ +S A ++ G + L P
Sbjct: 471 QEQWVSILRQLIHLGLLAQNIAH-------HSALQLTES-ARPVLRGEVPLQLAVPRV-- 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ LSK P Q N KL++ LR LR + E
Sbjct: 521 -SSLSK----------------------PRASQKSYGGNYDRKLFAKLRKLRKSIADE-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + Y +F +ATL +++ +P T ELL +NG+G+ K+ ++GV + I
Sbjct: 556 DNIPPYVVFSDATLLEMAELLPLTASELLAVNGVGQRKLERFGVPFMTLI 605
>gi|374572158|ref|ZP_09645254.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. WSM471]
gi|374420479|gb|EHR00012.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. WSM471]
Length = 621
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 231/655 (35%), Positives = 343/655 (52%), Gaps = 76/655 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FR Q EII G + VLMPTGGGKSL YQLPAL+ G +V+SPL++L
Sbjct: 23 RSVFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSLCYQLPALLREGCGVVVSPLIAL 82
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ +L+A + A L+ ++ E +I R L + LLYV PE++ L
Sbjct: 83 MRDQVAAMLEAGVNAAALNSSLTPQEASDIERRLIAG--DLDLLYVAPERLVTPRCL--- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+L AR +A IDEAHCVSQWGHDFRP+Y GL I+ ++FP+ P +ALTATA ++
Sbjct: 138 --ALLARAKVALFAIDEAHCVSQWGHDFRPEYVGLSIIAERFPDVPRIALTATADELTRK 195
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVSL--- 619
++V+ L L + F SF+RPN+ +D +L+ + H Y +S
Sbjct: 196 EIVERLALADSPHFVSSFDRPNIRYEIVDKRNAVSQLKDLIRERHAGDAGVVYCLSRKRV 255
Query: 620 --------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ G A YH +D + R+ Q ++ ++ +I AT+AFGMGI+KPDVRFV
Sbjct: 256 EEVAAALDDAGIAALPYHAGLDSSVRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVA 315
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKSIE Y+QE GRAGRDG+ S+ + Y SD ++ + MI + + G F
Sbjct: 316 HLDLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDE--------SSGSEEF 367
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ G+ L +V E CRR L +FGE C CDNC
Sbjct: 368 KRVSIGK--------LDALVGLAETP-HCRRRRLLAYFGEIVMGEGC-GNCDNCLTPPKM 417
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+D A+KL+ V TGQ+F + H+++V G L + V + H+ L++ G G+ L +
Sbjct: 418 --RDGKVLAQKLLSCVYRTGQRFGAMHLIDVLIGRLTEKVTQFGHDKLTVFGIGRELNEK 475
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR--FPSA-I 908
+ +LR LV L+ + S+ +G+ LK+ +S + ++ G V LR P A I
Sbjct: 476 QWRTVLRQLVAMGHLLSD---SEAFGA----LKLTES-SRGVLRGETEVWLREEAPGARI 527
Query: 909 NST--KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
S+ K + D+ PA G+ PQ +VD L A+ LR R+ + +
Sbjct: 528 RSSRAKSRRGDLAPAAGA----------------PQGDVDPELRAR----LRAWRSEIAR 567
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
E GV AY + +AT+ + + P T +EL + GIG K+ YG LL+ + +
Sbjct: 568 E--RGVPAYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVRA 620
>gi|433659081|ref|YP_007276460.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus BB22OP]
gi|432509769|gb|AGB11286.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus BB22OP]
Length = 611
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 221/659 (33%), Positives = 347/659 (52%), Gaps = 93/659 (14%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+E+I + + G D V+MPTGGGKSL YQ+PAL+ GITLVISPL+SL
Sbjct: 21 EEVFGYQTFRDGQQEVIASAVEGKDSLVIMPTGGGKSLCYQIPALVRSGITLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ M E + ++S + KL+YV+PE+V D + R
Sbjct: 81 MKDQVDQLKANGVAAECVNSTMSREELLSVYNRMHSG--QLKLVYVSPERVLMRDFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE+L LA I +DEAHC+SQWGHDFRP+Y LG LKQ F + P +ALTATA + +
Sbjct: 138 LENLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVPFMALTATADDATRR 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL----------------WMDCEKVAERLQVGLSYGHFF 609
D+++ L L + SF+RPN+ ++D +K G+ Y
Sbjct: 194 DILERLRLHEPHVHLGSFDRPNIRYNLVEKHKPISQIIRYLDTQKG----NCGIIYCGSR 249
Query: 610 LLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VR
Sbjct: 250 KKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 309
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV+H +P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE------------ 357
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
+ G + + L M ++ E CRR + L +FGE + +K C NC
Sbjct: 358 -----KDDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDIC 406
Query: 789 ----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
K F D T+ A+K + V Q F ++++EV RG N V++H H+ +S +G
Sbjct: 407 LDPPKHF---DATEEARKALSCVYRVNQSFGMTYVVEVLRGMQNIRVREHGHDKISTYGI 463
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ + I R L+ + L + + + +S L++ + +A L+ G ++ L
Sbjct: 464 GRDHSHDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVSLELAV 515
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P + + +KSD +K N KL++ LR LR +
Sbjct: 516 PRLDTAARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSI 550
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E +G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 551 ADE--DGLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|417321543|ref|ZP_12108080.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus 10329]
gi|328471322|gb|EGF42221.1| ATP-dependent DNA helicase RecQ [Vibrio parahaemolyticus 10329]
Length = 611
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 221/659 (33%), Positives = 347/659 (52%), Gaps = 93/659 (14%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+E+I + + G D V+MPTGGGKSL YQ+PAL+ GITLVISPL+SL
Sbjct: 21 EEVFGYQTFRDGQQEVIESAVEGKDSLVIMPTGGGKSLCYQIPALVRSGITLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ M E + ++S + KL+YV+PE+V D + R
Sbjct: 81 MKDQVDQLKANGVAAECVNSTMSREELLSVYNRMHSG--QLKLVYVSPERVLMRDFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE+L LA I +DEAHC+SQWGHDFRP+Y LG LKQ F + P +ALTATA + +
Sbjct: 138 LENLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVPFMALTATADDATRR 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL----------------WMDCEKVAERLQVGLSYGHFF 609
D+++ L L + SF+RPN+ ++D +K G+ Y
Sbjct: 194 DILERLRLHEPHVHLGSFDRPNIRYNLVEKHKPVSQIIRYLDTQKG----NCGIIYCGSR 249
Query: 610 LLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VR
Sbjct: 250 KKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVR 309
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV+H +P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE------------ 357
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
+ G + + L M ++ E CRR + L +FGE + +K C NC
Sbjct: 358 -----KDDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDIC 406
Query: 789 ----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
K F D T+ A+K + V Q F ++++EV RG N V++H H+ +S +G
Sbjct: 407 LDPPKHF---DATEEARKALSCVYRVNQSFGMTYVVEVLRGMQNIRVREHGHDKISTYGI 463
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ + I R L+ + L + + + +S L++ + +A L+ G ++ L
Sbjct: 464 GRDHSHDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVSLELAV 515
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P + + +KSD +K N KL++ LR LR +
Sbjct: 516 PRLDTAARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSI 550
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E +G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 551 ADE--DGLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|242214076|ref|XP_002472863.1| predicted protein [Postia placenta Mad-698-R]
gi|220728069|gb|EED81971.1| predicted protein [Postia placenta Mad-698-R]
Length = 452
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/466 (40%), Positives = 260/466 (55%), Gaps = 42/466 (9%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-----PGITLVIS 440
K VFG FR NQ E I A + G DVF+LMPTGGGKSL YQLPA +C G+T+VIS
Sbjct: 2 KDVFGLSGFRTNQLEAITAALDGKDVFLLMPTGGGKSLCYQLPA-VCSSGTTKGVTVVIS 60
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL SL+ DQ+ L N+ + S + E E+ L S+ K LLY+TPEK+ SD
Sbjct: 61 PLRSLMTDQVESLQAKNVDVVYFSSDQSRDESDEVQHRLRSNGQKPSLLYLTPEKIKHSD 120
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L R L L ++LAR V+DEAHC+S WG FR Y L L++ FP+ P++ALTATAT
Sbjct: 121 ALKRDLTDLYESKMLARFVVDEAHCISSWGRQFRDSYGALAYLRKTFPDVPIMALTATAT 180
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----EKVAERLQVGLSYGHFFLLKEFYV 616
K D++ LG+ CI QSFNRPNL + +KV + + + H Y
Sbjct: 181 GEAKNDIIAHLGIRGCIELTQSFNRPNLNYEVRLKKKKVTDEIVDFIVTKHKNESGVIYC 240
Query: 617 VS-LEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
S ++C G KA YH +D R ++W + + I+ AT+A GMGI+K
Sbjct: 241 SSKVKCEEVAKNLRDKYGLKARHYHAGLDDRDRTVTMQEWKRGDFKIVVATIALGMGIDK 300
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
+VRFVIH+++P S+EGY+QE GRAGRDG+ + C+LYYS SD H + + + E+S
Sbjct: 301 GNVRFVIHYAMPSSLEGYYQETGRAGRDGKPADCILYYSGSD----AHPVWRRINEES-- 354
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
P + E + R++ +C N+VDCRR L FGE FDSA C+K CDN
Sbjct: 355 IPETEK----------EKQRDTFRRVIQFCVNNVDCRRRQVLGFFGEVFDSASCRKGCDN 404
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLT----GQQFSSSHILEVFRGS 826
C +KD+ A ++ L K ++ + L+V RG+
Sbjct: 405 CRDTTDIEKKDMRKAAVDIINLAKSMILKHKERITRIQFLDVIRGA 450
>gi|407072033|ref|ZP_11102871.1| ATP-dependent DNA helicase RecQ [Vibrio cyclitrophicus ZF14]
Length = 612
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 222/656 (33%), Positives = 346/656 (52%), Gaps = 87/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+E+I+ + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 22 QDVFGYQSFRDGQQEVIDLAVEGKDSLVIMPTGGGKSLCYQIPALVREGLTLVISPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ +M + + +NS + K++YV+PE+V D + R
Sbjct: 82 MKDQVDQLKANGVAAECINSSMPREKLISVFNRMNSG--QLKMVYVSPERVLMRDFIER- 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ FP+ P +ALTATA + ++
Sbjct: 139 LQGLP----LSMIAVDEAHCISQWGHDFRPEYASLGQLKQYFPHVPYMALTATADDATRK 194
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKE 613
D++ L LV + SF+RPN+ + +V L+ G+ Y E
Sbjct: 195 DIISRLQLVEPHTYLGSFDRPNIRYNLVEKHKPVSQVVRYLETQKGNCGIIYCGSRKKVE 254
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
L C G +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+
Sbjct: 255 MVTEKL-CNNGLRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVV 313
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H +P++IE Y+QE GRAGRDG + ++ + +D ++ M+ + E+ P
Sbjct: 314 HFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADMGWLRRMLDE--KEEGPQK------ 365
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI--- 788
+ L M ++ E CRR + L +FGE + +K C NC
Sbjct: 366 ---------QVEMHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKQCGNCDICLDP 410
Query: 789 -KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K F D T A+K + V Q F +++EV RG N V+ + H+ LS +G G+
Sbjct: 411 PKHF---DATQEAQKALSCVYRVNQSFGMGYVVEVMRGMQNIRVRDNGHDKLSTYGIGRD 467
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 468 HSHDYWISIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGEMSLELAVPRL 519
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ + +KSD +K N KL++ LR LR + E
Sbjct: 520 DTAVRNAKSDKLSSK-------------------------NYDKKLFAKLRKLRKSIADE 554
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+ I
Sbjct: 555 --DGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLDKYADPFLDLIQEHI 608
>gi|237809713|ref|YP_002894153.1| ATP-dependent DNA helicase RecQ [Tolumonas auensis DSM 9187]
gi|237501974|gb|ACQ94567.1| ATP-dependent DNA helicase RecQ [Tolumonas auensis DSM 9187]
Length = 604
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 232/660 (35%), Positives = 358/660 (54%), Gaps = 82/660 (12%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGI 435
P+ + L+ ++VFG +FRP Q +I +SGHDV +MPTGGGKSL YQ+PAL+ PG+
Sbjct: 5 PYPQPLDVL-REVFGYQAFRPGQDAVIAQLVSGHDVLAIMPTGGGKSLCYQIPALVRPGL 63
Query: 436 TLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEK 495
+V+SPL++LI+DQ+ L + A L + E E+ +L KLLYV PE+
Sbjct: 64 AIVVSPLIALIKDQVDALRANGVAAAGLHSGLARDELLEVYSQLWRG--DLKLLYVAPER 121
Query: 496 VAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLAL 555
+ D L R L+ + LA I IDEAHC+SQWGHDFRP+Y LG LKQ FP P+ AL
Sbjct: 122 ILLPDFLAR-LQDIP----LALIAIDEAHCISQWGHDFRPEYAELGRLKQLFPQVPIAAL 176
Query: 556 TATATASVKEDVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGL 603
TATA + + D++ LGL ++ SF+RPN+ ++ K +E+L Q G+
Sbjct: 177 TATADDATRLDILNRLGLHEPLVHLASFDRPNIRYTLVEKFKPSEQLLHYVQKQAGQCGI 236
Query: 604 SYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y E L+ ++AA YH + +RA VQ + +D+++I+ ATVAFGMGI
Sbjct: 237 VYCTSRKRTEEVADILKVRNYRAACYHAGLPADERARVQDAFIRDDLDIVVATVAFGMGI 296
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
+KP+VRFV+H+ +PK+IE Y+QE GRAGRDG + +L + +D RV+ ++ +
Sbjct: 297 DKPNVRFVVHYDIPKNIESYYQETGRAGRDGLPAEALLLFDPADIERVRGLLEK------ 350
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
N R +E NL M ++ E CRR + L +FGE + + C C
Sbjct: 351 ---------NENAEQRQVEIFKLNL--MSAFAEAQT-CRRQVLLNYFGE-YHAEPC-GNC 396
Query: 783 DNC-SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
D C K++ D T+ A+K + V GQ++ H++E+ RG+ +Q +++ H+ LS
Sbjct: 397 DICLDPPKTY---DGTEDAQKALSCVYRVGQRYGMGHVIEILRGAQSQRIRELGHDKLST 453
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+G GK + +LR L+ + L++ + + VL++ ++ A ++ G Q +
Sbjct: 454 YGIGKEQSHEYWVSVLRQLIHKGLLVQNITR-------HLVLQLTEA-ARPILRGEQALE 505
Query: 902 LRFPSA--INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRM 959
L P +++ KL + ++ A+G A L+ LR
Sbjct: 506 LAVPRTELLSAKKLRRRELELAQGE-------------------------DAALFRELRK 540
Query: 960 LRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
LR L +E EG+ Y +F +ATL L++ P TE E+L ING+G K+ ++G LE I
Sbjct: 541 LRKQLAEE--EGIPPYVVFNDATLLELAQFRPTTESEMLTINGVGYRKLERFGEVFLECI 598
>gi|410611552|ref|ZP_11322650.1| ATP-dependent DNA helicase RecQ [Glaciecola psychrophila 170]
gi|410168970|dbj|GAC36539.1| ATP-dependent DNA helicase RecQ [Glaciecola psychrophila 170]
Length = 728
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 230/649 (35%), Positives = 348/649 (53%), Gaps = 82/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG FR +Q II+ + + +MPTGGGKSL YQ+P + G+T+VISPL+SL
Sbjct: 10 KSVFGFDQFRESQEAIISNVLHKQNTLAIMPTGGGKSLCYQIPGTVFDGLTIVISPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L + IPA L+ ++ ++ Q L + + KLL++ PE +S++L
Sbjct: 70 MQDQVRQLNELAIPACVLNSSLSDSDYQNNLDAIKQQ--QIKLLFLAPETALQSNIL--- 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L +A I IDEAHC+S+WGHDFRP+Y+ L L + FP +ALTATAT V+E
Sbjct: 125 --DLLTHCDVACIAIDEAHCISEWGHDFRPEYRQLNRLIECFPRAVCIALTATATPRVRE 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNL----------WMDCEKVAERL--QVGLSYGHFFL-LK 612
D+ + L +V+ F SF+RPNL ++ C+K E+ Q G+ Y +
Sbjct: 183 DIKRQLNIVDSSEFISSFDRPNLFIGVVPKDNPYLQCKKFVEQHPEQSGIIYCQSRKGVD 242
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E + G A YH + +R+ Q+++ +D++NII AT+AFGMGINKPDVR+V+H
Sbjct: 243 ELTSKLQQDGFSALPYHAGLSSIKRSEYQERFIRDDVNIIVATIAFGMGINKPDVRYVLH 302
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LPK+IEGY+Q+ GRAGRDG + C+L + Y D +++ I Q EQ
Sbjct: 303 YDLPKNIEGYYQQIGRAGRDGLDADCLLLFGYGDTGKIRFFIDQMSNEQEK--------R 354
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+AN +L +M++ E + DCRR L +FGEK +C CDNC+ +S
Sbjct: 355 LANM---------HLNQMLALAEAE-DCRRSPLLEYFGEKSTKENC-ANCDNCTG-ESKE 402
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D+T A+K + V TGQ+F SSHI++V RGS + V +++H LS + G K +
Sbjct: 403 KSDLTVPAQKFLSCVHRTGQRFGSSHIIDVLRGSNAEKVLQNQHNLLSTYNIGNEYNKKQ 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQN--VVLRFPSAINS 910
+ R L+ + L +E + +G LK+ Q KA +++ G+ +L+ P A S
Sbjct: 463 WMTLARQLIQKGLLNQE----EQFGG----LKLTQ-KAGDVLKGKVPFFALLQQPVAA-S 512
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ SK+ V P +L + L+ R L A
Sbjct: 513 SHTSKTLVNPG----------------------------DQQLVAILKADRKRLADAA-- 542
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y IF + TL ++ P ++E LL I+G+G+AK+ KYG L I
Sbjct: 543 NLPPYAIFSDRTLNEMAHFFPHSQESLLRIHGVGQAKLDKYGEHYLALI 591
>gi|383192105|ref|YP_005202233.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371590363|gb|AEX54093.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 610
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 217/652 (33%), Positives = 343/652 (52%), Gaps = 78/652 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IIN +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIINTAISGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+ A + A L+ +Q +++ + + K+LY+ PE++ D L Q
Sbjct: 78 MKDQVDQLMAAGVEAGCLNSTQTREQQLDVMAGCRAG--RIKMLYIAPERLMMGD-FLEQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ N A + +DEAHC+SQWGHDFRP+Y+ LG LK ++P PV+ALTATA + +
Sbjct: 135 LQQWNP----AMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D RA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + VL Y +D ++ + E+ P
Sbjct: 311 FDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+G + L M ++ E CRRL+ L +FGE +A C NC
Sbjct: 357 ---AGAQQDVERHKLNAMNAFAEAQT-CRRLVLLNYFGEGKQNA-----CGNCDVCLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D A+K + +V GQ+F +++EV RGS NQ ++++ H+ L+++G GK +
Sbjct: 408 KRYDGLLDAQKALSVVARVGQRFGLGYVVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ ++R L+ + + + ++ S L++ +S A ++ G + L P I +
Sbjct: 468 HWTSVVRQLIHLGLITQNI-------AMHSALQLTES-ARPVLRGEIPLQLAVPR-IQTL 518
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K+ S G N KL++ LR LR L +
Sbjct: 519 KIKSSASQKTYGG-----------------------NYDRKLFAKLRKLRKSLADD--NN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
V Y +F + TL +++ +P + +LL+I G+G+ K+ K+G + I I
Sbjct: 554 VPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAMIRDHI 605
>gi|54293843|ref|YP_126258.1| hypothetical protein lpl0899 [Legionella pneumophila str. Lens]
gi|53753675|emb|CAH15133.1| hypothetical protein lpl0899 [Legionella pneumophila str. Lens]
Length = 608
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 226/649 (34%), Positives = 346/649 (53%), Gaps = 81/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFR Q +II +SG DV VLMPTGGGKSL YQ+PA++ PG+ +V+SPL++L
Sbjct: 19 KKYFGFDSFRSPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRPGVGIVVSPLIAL 78
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A + + ++ E + +L +L+ + + LLY+ PE++ + L R
Sbjct: 79 MEDQVTALKLQGIRAAYYNSSLTAEEARNVLNQLHHN--ELDLLYIAPERLISTSFLDRL 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E ++ IDEAHC+SQWGHDFRP+Y LG+LK FP+ P++ALTATA +E
Sbjct: 137 SECT-----ISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIALTATADKQTRE 191
Query: 566 DVVQALGLVNCIIFRQSFNRPNL------------WMDCEKVAERLQVGLSY-GHFFLLK 612
D+V L + SFNRPN+ ++ ++ Q G+ Y G ++
Sbjct: 192 DIVTKLN-YQPKKYVVSFNRPNIHYKVVPKTNAVKQLNLFLQSDTQQSGIIYCGTRHTVE 250
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E G KA YH + A R VQ + D I+I+ AT+AFGMGI+KP+VRFV+H
Sbjct: 251 HLTAKLQELGFKARAYHAGLPHADRREVQNLFRYDRIDIVVATIAFGMGIDKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H LPKSIEGY+QE GRAGRDG + +L Y +D R++ I N
Sbjct: 311 HDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWI----------------MN 354
Query: 733 VA-NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ + R +ETN N M+++ E CRR + L +F E C K CD C
Sbjct: 355 IPLDEQRHIETNKLN--HMLAFAEAS-HCRRQILLRYFDEP-SHTEC-KNCDVCDNPPQ- 408
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A+K + + Q + +H ++V RGSL++ +K+ HE LS G GK + +
Sbjct: 409 -TADATEDAQKFLSCIYRLKQSYGLTHTIDVLRGSLSEKIKQSGHEHLSTFGIGKEKSAN 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP-SAINS 910
+ L+ +D+ ++++ + VL++ KA L+ G +++ L P + +NS
Sbjct: 468 YWKHLAWQLIHKDYCLQDMNHFN-------VLRLT-PKAIPLLKGEESISLTIPNNDLNS 519
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+K GK +PS +P+ S L+ LR LR L E E
Sbjct: 520 SK-------------EKGKQNPS-----FKPE-------SNPLFEKLRSLRRQLADE--E 552
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ IF +ATL +++ P+ ++LL ++G+G+ K+++YG LE +
Sbjct: 553 NKPPFMIFSDATLHEMAQSKPKNSKQLLNVSGVGQHKLARYGHYFLEAL 601
>gi|406997576|gb|EKE15607.1| hypothetical protein ACD_11C00117G0003 [uncultured bacterium]
Length = 719
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 221/660 (33%), Positives = 347/660 (52%), Gaps = 82/660 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
+E KK FG FRP QREII ++ D FVLMPTGGGKSL YQLPAL PGITLVIS
Sbjct: 1 METILKKYFGFDEFRPLQREIIENVLNKRDTFVLMPTGGGKSLCYQLPALKFPGITLVIS 60
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L++DQ+ L + + A FL+ ++ E Q I +E+ K K+LY+ PE++A S+
Sbjct: 61 PLIALMKDQVDFLKASGVAAEFLNSSLSGDEIQRIQKEIKEG--KVKILYIAPERMA-SN 117
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L++L + I +DEAHC+S+WGHDFRPDY+ L LK FP P++ALTATAT
Sbjct: 118 GFENFLQNLKP----SLIAVDEAHCISEWGHDFRPDYRNLRRLKDIFPGVPIMALTATAT 173
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-------EKVAERLQVGLSYG---HFFL 610
V++D++ L N IF SFNR NL+ EK+ + L+ + F
Sbjct: 174 EKVRQDILNQLNFENPNIFISSFNRDNLFFRVIEKKNSFEKLLKLLENRRKESVIIYCFS 233
Query: 611 LKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
K+ ++L G A YH +D A+R Q+ + +D+INII AT+AFGMGI+KPDV
Sbjct: 234 RKDTENLALNLRSEGFSALAYHAGLDSAKRKKTQEDFIQDKINIIVATIAFGMGIDKPDV 293
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
R V+H++ PKS+EGY+QE GRAGRDG + CV++Y+++D + ++ I
Sbjct: 294 RMVVHYTFPKSLEGYYQEVGRAGRDGLPAECVMFYTFADARKHRYFI------------- 340
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
NV + + L ++ Y + + CRR L +FGEK++ +C CD+C
Sbjct: 341 ----NVMDDENLKRQTERKLQEVMDYADLN-SCRRRHILSYFGEKYEKENC-GGCDHCLS 394
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K D T A+K++ + G +F + +I+++ +G ++ +++ H LS++G
Sbjct: 395 GKEMF--DATVVAQKILSAIIRCGFRFGAGYIVDILKGKNSKQIRERGHSKLSVYGIVND 452
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS- 906
++ + I++ L+ + +E S Y +L++ K + ++ + L P
Sbjct: 453 FSEGQLFEIIKSLIGVQLIEKE---SGDY----PILRLT-GKGKKFLHSKEKLSLSKPKE 504
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
+ +L D L +L+ LR +R L
Sbjct: 505 EVFDDRLKIKDA----------------------------LEYDGRLFEKLREVRKKL-- 534
Query: 967 EAGE-GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
AGE V + +F + +L+ ++ P E L+I G+G+ K+ +G L+ I +E
Sbjct: 535 -AGELNVPPFVVFSDVSLREMAYYFPINENNFLKIAGVGEQKLKNFGKIFLDEINKYARE 593
>gi|336122927|ref|YP_004564975.1| RecQ [Vibrio anguillarum 775]
gi|335340650|gb|AEH31933.1| RecQ [Vibrio anguillarum 775]
Length = 619
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 345/652 (52%), Gaps = 85/652 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+E+I+A+++G D V+MPTGGGKSL YQ+PAL+ GITLVISPL+SL
Sbjct: 29 QTVFGYQSFRVGQQEVIDASLAGQDSLVIMPTGGGKSLCYQIPALVKEGITLVISPLISL 88
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ +M + +N+ + KL+Y +PE+V SD + R
Sbjct: 89 MKDQVDQLKANGVAAECINSSMSREMLMSVYNRMNAG--QLKLIYASPERVLMSDFIER- 145
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L LA I +DEAHC+SQWGHDFRP+Y LG LKQ F + P +ALTATA + +
Sbjct: 146 LQQLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVPFMALTATADDATRV 201
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++ L L ++ SF+RPN+ + EK +R G+ Y E
Sbjct: 202 DILHRLQLQEPHVYLGSFDRPNIRYTLVEKHKPVSQVIRYLDTQRGHCGIIYCGSRKKVE 261
Query: 614 FYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 262 MLTEKLCNNHLRAASYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVH 321
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ ++ P P
Sbjct: 322 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRML-----DEKPEGPQK---- 372
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ + L M ++ E CRR + L +FGE D K C NC
Sbjct: 373 --------QVESHKLGAMSAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPP 418
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T A+K + V Q F +++EV RG N ++++ H+ L+ +G G+
Sbjct: 419 KHF---DATQEAQKALSCVYRVNQSFGIGYVVEVMRGMQNIRIRENGHDKLTTYGIGRDH 475
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ I R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 476 SHDYWVSIFRQLIHKGLLQQNITR-------NSTLQLTE-EARPLLRGEMPLELAIPRLD 527
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + +KS+ KLS D P L++ LR LR + E
Sbjct: 528 TAARAAKSE-----------KLSNKNYDKP--------------LFAKLRKLRKSIADE- 561
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 562 -DGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 612
>gi|333925046|ref|YP_004498625.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS12]
gi|333929999|ref|YP_004503577.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica AS9]
gi|386326870|ref|YP_006023040.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS13]
gi|333471606|gb|AEF43316.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica AS9]
gi|333489106|gb|AEF48268.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS12]
gi|333959203|gb|AEG25976.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS13]
Length = 618
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 218/648 (33%), Positives = 344/648 (53%), Gaps = 78/648 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 26 RDTFGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 85
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A + +Q E++ S + K+LY+ PE++ D L
Sbjct: 86 MKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRSG--QIKMLYIAPERLMM-DSFLDL 142
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP PV+ALTATA S +
Sbjct: 143 LDHCPP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATADESTRG 198
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + ++ SF+RPN+ + EK +R + G+ Y + E
Sbjct: 199 DIVRLLALHDPLVQISSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGIIYCNSRAKVE 258
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D +R+ VQ+ + +D++ ++ ATVAFGMGINKP+VRFV+H
Sbjct: 259 DTTARLQSRGLSVGAYHAGLDNDRRSQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVH 318
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 319 FDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EEKP--------- 364
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+G+ L+ L M ++ E CRRL+ L +FGE ++ C NC
Sbjct: 365 ---AGQQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGK-----QQNCGNCDICLDPP 415
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D + A+K + V GQ+F +I+EV RGS NQ ++++ H+ L ++G G+
Sbjct: 416 KRYDGLEDARKALSCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHDKLPVYGIGREQTTE 475
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ +LR L+ F+ + + ++ S L++ ++ A ++ G + L P I S
Sbjct: 476 HWTSVLRQLIHLGFITQNI-------AMHSALQLTEA-ARPVLRGELELQLAVPR-IQSL 526
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K SR S Q N KL++ LR LR + E E
Sbjct: 527 K--------------------SRG---SANQKSYGGNYDRKLFAKLRKLRKSIADE--EN 561
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y +F +ATL +++++P +LL +NG+G+ K+ ++G + I
Sbjct: 562 IPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAMI 609
>gi|115526900|ref|YP_783811.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisA53]
gi|115520847|gb|ABJ08831.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisA53]
Length = 617
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 226/646 (34%), Positives = 333/646 (51%), Gaps = 69/646 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR NQ +I+ SG D VLMPTGGGKSL YQLP+L+ G +V+SPL++L++
Sbjct: 23 VFGLPGFRGNQEKIVTHVASGGDCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLIALMR 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL+A + A L+ + + E + ++L + LLYV PE++ L
Sbjct: 83 DQVAGLLEAGVRAAVLNSTLSYQEANAVEQQLLDG--ELDLLYVAPERLLTPRCL----- 135
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
SL AR LA IDEAHCVSQWGHDFRP+Y GL + +KFPN P +ALTATA + ++
Sbjct: 136 SLLARAKLALFAIDEAHCVSQWGHDFRPEYIGLSAIAEKFPNVPRIALTATADDLTRREI 195
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVSL----- 619
+ LGL F SF+RPN+ +D +L+ + H Y +S
Sbjct: 196 AERLGLTEAPCFVASFDRPNIRYEIVDKHNAPSQLKAFIDERHAGDSGIVYCLSRAKVED 255
Query: 620 ------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
G A YH +D RA Q ++ ++ +I ATVAFGMGI+KPDVRFV H
Sbjct: 256 TAAALSRAGITALPYHAGLDAGVRAKNQDRFINEDGVVIVATVAFGMGIDKPDVRFVAHL 315
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S + Y SD ++ + MI + + G + F
Sbjct: 316 DLPKSIEAYYQETGRAGRDGKPSDAWMAYGLSDIVQQRRMIDE--------STGSDAFKR 367
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+ G+ L +V CE CRR L +FGE HC CDNC +
Sbjct: 368 VSIGK--------LEALVGLCET-TGCRRTRLLGYFGETPHEVHC-GNCDNCLSPPKVWD 417
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
V A+KL+ TGQ+F + H+++V G L + V + H+ LS+ G G L + +
Sbjct: 418 GSV--AAQKLLSCAYRTGQRFGAMHLIDVLIGRLTERVTQFGHDKLSVFGIGPELNEKQW 475
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
++R LV L + ++ +G+ LK+ ++ + ++ G V+LR + + +
Sbjct: 476 RGVIRQLVALGHLRPD---NEAFGA----LKLTET-SRGVLKGESAVMLREQTGGRAPR- 526
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
+KS +G L S + + P L+++L+ R+ + + GV
Sbjct: 527 AKSR----RGDLASAPVPRAAAGDPD-------------LFAALKAWRSEVART--RGVP 567
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
AY + +AT+ ++ PRT +EL I GIG K+ YG LL +
Sbjct: 568 AYVVLHDATMDGIAAARPRTLDELRRIAGIGDKKLEHYGAALLALV 613
>gi|423204847|ref|ZP_17191403.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AMC34]
gi|404625723|gb|EKB22538.1| ATP-dependent DNA helicase RecQ [Aeromonas veronii AMC34]
Length = 611
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 339/651 (52%), Gaps = 83/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q EII ++G D VL PTGGGKSL YQ+PAL+ PG+ +V+SPL+SL
Sbjct: 21 QAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCYQIPALLRPGLGVVVSPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ + E + + + KL+YV+PE++ + + + R
Sbjct: 81 MKDQVDSLRANGVAAVYINSALSREEMIQNFAAMRRG--EIKLVYVSPERLLQHEFMDRL 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E L IDEAHCVSQWGHDFRP+Y LG LKQ FP PV+ALTATA + +
Sbjct: 139 AELP-----LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRS 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGLSYGHFFLLKE 613
D++ L L + I SF+RPN+ ++ K AE+L G+ Y E
Sbjct: 194 DMLHRLELNDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KAA YH + QR Q+ + KD+I I+ ATVAFGMGI+KP+VRFV+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLEQRQQTQEAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK+IE Y+QE GRAGRDG + +L Y +D RV+ ++ N
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD----------------N 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ N + L+ L M ++ E CRR + L +FGE D K C NC
Sbjct: 358 IENPQQ-LQVEQYKLNVMAAFAEAQT-CRRQVLLNYFGEYND-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
KS+ D T+ A+K + V GQ F +++EV RGSLNQ +K H H+ LS +G GK
Sbjct: 411 KSY---DGTEDAQKALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQ 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ++R L+ + L + + + N+VL+ A
Sbjct: 468 SHEYWMSVIRQLIHKGLLTQNITR--------------------------NLVLQLTEA- 500
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + + +V K L +L P + + + N +L+ LR LR + ++
Sbjct: 501 -ARPVLRGEV---KLELAVPRLQPISSRKEKRNGLLDNANYDKRLFKELRGLRKQIAED- 555
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E V Y +F +ATL +++ +P TE+E+L ING+G K+ ++G ++ I
Sbjct: 556 -EEVPPYVVFNDATLVEMAQLMPMTEDEMLAINGVGHRKLERFGEAFMDLI 605
>gi|292486686|ref|YP_003529556.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora CFBP1430]
gi|292897923|ref|YP_003537292.1| ATP-dependent DNA helicase [Erwinia amylovora ATCC 49946]
gi|428783612|ref|ZP_19001107.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora ACW56400]
gi|291197771|emb|CBJ44866.1| ATP-dependent DNA helicase [Erwinia amylovora ATCC 49946]
gi|291552103|emb|CBA19140.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora CFBP1430]
gi|312170752|emb|CBX79014.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora ATCC BAA-2158]
gi|426277898|gb|EKV55621.1| ATP-dependent DNA helicase RecQ [Erwinia amylovora ACW56400]
Length = 610
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 339/652 (51%), Gaps = 79/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ II +++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ S K +LLY+ PE++ D L Q
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSG--KVRLLYIAPERLMM-DNFLEQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N A + +DEAHC+SQWGHDFRP+Y LG L+Q+ P+ PV+ALTATA + +
Sbjct: 135 LTHCNP----AMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ + L L + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIARLLQLNDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D A RA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGMDNAHRAQVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L Y +D ++ + + +Q P R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLEE--KKQGPLQ-DIERHK 367
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ G E T CRRL+ L +FGE A CDNC
Sbjct: 368 LNAMGAFAEAQT---------------CRRLVLLNYFGEGRQQA-----CDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + GQ+F +I+E+ RG+ NQ ++ +H+ L ++G G+
Sbjct: 408 RRYDGLVEAQKALSCIYRVGQRFGMGYIVEILRGANNQRIRDMQHDKLPVYGIGRDQNHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ +LR L+ + + + ++ S L++ ++ A ++ G +++L P ++
Sbjct: 468 HWTSVLRQLIHLGLVTQNI-------AMYSALQLTEA-ARPVLRGEVSLLLAVPRLVS-- 517
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+GS Q N KL++ LR LR + E +
Sbjct: 518 -------VKTRGS----------------SQKSFGGNYDRKLFAKLRKLRKAIADE--DN 552
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++++P T E+L +NG+G K+ ++G L I+ I
Sbjct: 553 LPPYVVFNDATLIEMAEQMPITASEMLSVNGVGHKKLERFGKPFLLMIKEHI 604
>gi|86751799|ref|YP_488295.1| ATP-dependent DNA helicase, RecQ [Rhodopseudomonas palustris HaA2]
gi|86574827|gb|ABD09384.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris HaA2]
Length = 618
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 226/649 (34%), Positives = 336/649 (51%), Gaps = 70/649 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR +Q II G D VLMPTGGGKSL YQLPAL+ G +V+SPL++L++
Sbjct: 24 VFGLPGFRGHQEAIIRHVAHGGDCLVLMPTGGGKSLCYQLPALLRDGCGIVVSPLIALMR 83
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL+A + A L+ ++ + E I R+L + + LLYV PE++ L
Sbjct: 84 DQVAGLLEAGVRAAALNSSLSYAEADAIERQLLAG--ELDLLYVAPERLLTPRCL----- 136
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
++ AR +A IDEAHCVSQWGHDFRP+Y GL + +KFPN P +ALTATA A + ++
Sbjct: 137 AMLARAKIALFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPNVPRIALTATADALTRREI 196
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVS------ 618
+ LGL + F SF+RPN+ +D + +L+ ++ H Y +S
Sbjct: 197 SERLGLTDAPCFVSSFDRPNIRYAIVDKQNAPAQLKAFIADKHMGHSGVVYCLSRAKVED 256
Query: 619 -----LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G A YH + RA Q ++ ++ +I AT+AFGMGI+KPDVRFV H
Sbjct: 257 IADTLCKAGIDALPYHAGLPAEIRARNQDRFINEDGVVIVATIAFGMGIDKPDVRFVAHL 316
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S + Y SD ++ + MI + + G + F
Sbjct: 317 DLPKSIEAYYQETGRAGRDGKPSDAWMAYGLSDIVQQRRMIDE--------SSGSDAFKR 368
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+ G+ L +V CE+ CRR L +FGE C CDNC I
Sbjct: 369 VSMGK--------LDALVGLCESTA-CRRTRLLGYFGETALEPQC-GNCDNCLSPPKVI- 417
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D T A+KL+ TGQ+F + H+++V G L + V + H+ LS+ G G + +
Sbjct: 418 -DGTVAAQKLLSCAYRTGQRFGAQHLIDVLLGRLTERVGQFGHDKLSVFGIGGEFNEKQW 476
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
++R LV L + S+ +G+ LK+ +S + ++ G V+LR T
Sbjct: 477 RAVIRQLVSLGHLAPD---SEAFGA----LKLTES-SRAVLKGDAQVMLR-----EQTGG 523
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
+G L+ G P + + D L+++L+ R+ + K GV
Sbjct: 524 RPPRAKSRRGDLVGG--------APRESTGDPD------LFAALKAWRSEVAKS--RGVP 567
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
AY + +AT+ ++ PR+ +EL I GIG K+ YG LL + ++
Sbjct: 568 AYVVLHDATMDGIAAVRPRSLDELRGIPGIGDKKLEHYGQELLALVNAS 616
>gi|75908908|ref|YP_323204.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
gi|75702633|gb|ABA22309.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
Length = 718
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 228/664 (34%), Positives = 356/664 (53%), Gaps = 76/664 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG +FRP QR+II + D+ V+MPTGGGKSL +QLPAL+ G+T+V+S
Sbjct: 7 LEQALKYHFGYDNFRPGQRQIIEDALQNRDLMVVMPTGGGKSLCFQLPALMKQGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L NI ATFL+ ++ + + RE K +LLYV PE++ S+
Sbjct: 67 PLIALMQDQVEALRNNNISATFLNSSLNAYQVRS--REEAILNGKVRLLYVAPERLL-SE 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ +N + ++ IDEAHCVS+WGHDFRP+Y+ L L++++PN PVLALTATAT
Sbjct: 124 RFLPFLDLVNEKVGISIFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPNVPVLALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----EKVAERLQV-----GLSYGHFFL 610
V+ D++Q LGL I SFNR NL+ + + AE L++ G + +
Sbjct: 184 DRVRSDIIQQLGLKQPSIHLASFNRQNLYYEVRPKSKQAYAELLELIRDNEGSAIIYCLT 243
Query: 611 LKEFYVVSLECGH---KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
K+ ++ + A YH + +R+ Q ++ +D++ ++ AT+AFGMGINKPDV
Sbjct: 244 RKKVEELTFKLQKDKISALSYHAGLPDDERSKNQTRFIRDDVRVMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
R V+H +P+++E Y+QE GRAGRDG+ S C +++S+ D ++ I Q Q
Sbjct: 304 RLVVHFDIPRNLESYYQESGRAGRDGEPSRCTIFFSFGDIKTIEWSIEQKTDPQEQLIA- 362
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ L +M+ Y E DCRR +QL +FGE+F + +C CDNC
Sbjct: 363 ----------------KQQLRQMIDYAEG-TDCRRTIQLGYFGERF-AGNCG-NCDNCRY 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K +D T A K + V ++F HI++V RG+ + ++ H+ LS +G GK
Sbjct: 404 PKPM--QDWTIEAMKFLSCVARCKERFGMLHIIDVLRGAKKDKIIQYEHDKLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E + R L+ + L + SD Y SVLK+N + + ++ ++ V L P A
Sbjct: 462 RTVDEWRTLGRSLLHQGLLEQ---TSDGY----SVLKLN-ALSWEVMKRQRQVFLSVPVA 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
K SL+ +TP + E L LR LR L E
Sbjct: 514 -------------QKLSLI--------QETPKFEEAEA-------LLHRLRSLRKQLADE 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFY 1027
+ V Y +F ++TL+ + + P+ E +++G+G K+++YG + + I + +E +
Sbjct: 546 --QSVPPYVVFHDSTLKLMVQVQPQNLLEFSKLSGVGSHKLAQYGEKFIAEIRAYRQEKH 603
Query: 1028 KTDK 1031
+K
Sbjct: 604 PQEK 607
>gi|28198526|ref|NP_778840.1| ATP-dependent DNA helicase [Xylella fastidiosa Temecula1]
gi|28056610|gb|AAO28489.1| ATP-dependent DNA helicase [Xylella fastidiosa Temecula1]
Length = 600
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 346/648 (53%), Gaps = 77/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+ II +GHD VLMPTGGGKSL YQ+PAL+ GI +VISPL++L
Sbjct: 12 QRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPALLRKGIGVVISPLIAL 71
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ T+ Q I L + LLY+TPE++ + L
Sbjct: 72 MQDQVETLRQLGVRAAYLNSTLDATQAQRIEHALVT--ADLDLLYITPERLLTAHFL--- 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P+ P +ALTATA +
Sbjct: 127 --SLLERSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHVPRIALTATADPPTQR 184
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKE 613
++ + L L + F SF+RPN+ + +K R Q+ G+ Y K
Sbjct: 185 EIAERLDLSDAHHFISSFDRPNIRYTVVQKNNMRRQLQEFLSRHRNTAGIVYA-MSRRKT 243
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ + C G+ A YH + RA Q+ + ++E ++CAT+AFGMGINKPDVRFV
Sbjct: 244 EEIAAYLCTQGYNALPYHAGLPAETRAKHQRCFLREEGIVMCATIAFGMGINKPDVRFVA 303
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKS+EGY+QE GRAGRDG+ + + YS D + +K MI Q A ++ R
Sbjct: 304 HIDLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSEASEA-------RK 356
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
V + L ++ YCE+ + CRR L L FGE + + C CDNC +
Sbjct: 357 CVERA---------KLDHLLGYCES-MQCRRQLLLSSFGETYPNP-CGN-CDNC--LTPA 402
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T ++K + V TGQ+F H++++ RGS +Q + + H+ LS +G G+ + +
Sbjct: 403 TAWDATVLSQKALSCVYRTGQRFGVGHLIDILRGSKSQRILQLGHDQLSTYGIGRDVDER 462
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ R LV L EV ++ YG L++ S + ++ G + V++R I
Sbjct: 463 SWRSVFRQLVATHLL--EV-DNEGYGG----LRLTPS-SRPVLKGERQVMMRRDQFIRE- 513
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
D Q L L+++L LR L KE +
Sbjct: 514 -----------------------RDRTGQRHGLSVLPEDLGLFNALHRLRAQLAKE--QN 548
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V A+ IF ++TL+H++++ P L +INGIG K+++YG +L+E +
Sbjct: 549 VPAFVIFHDSTLRHIAEQRPTNINALSKINGIGSNKLTRYGHQLIELV 596
>gi|238760167|ref|ZP_04621314.1| ATP-dependent DNA helicase recQ [Yersinia aldovae ATCC 35236]
gi|238701603|gb|EEP94173.1| ATP-dependent DNA helicase recQ [Yersinia aldovae ATCC 35236]
Length = 605
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 342/657 (52%), Gaps = 88/657 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 13 RDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 72
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
++DQ+ LL + A L+ + +Q ++ D C+ KLLY+ PE++ +
Sbjct: 73 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVM-----DGCRSGQIKLLYIAPERLVM-ESF 126
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA +
Sbjct: 127 LDQLHQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEA 182
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHF 608
+ D+++ L L ++ SF+RPN LW + +R + G+ Y +
Sbjct: 183 TRGDILRLLNLSQPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNS 240
Query: 609 FLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+V
Sbjct: 241 RAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNV 300
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + VL Y +D ++ + E+ P
Sbjct: 301 RFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL-----EEKP---- 351
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+G + L M ++ E CRRL+ L +FGE ++ C NC
Sbjct: 352 --------AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQPCGNCDI 397
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+
Sbjct: 398 CLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREMGHDKLSVYGIGR 457
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+LR L+ L + + ++ S L++ ++ A ++ + L P
Sbjct: 458 EQTHEHWVSVLRQLIHLGLLSQNI-------AMFSALQLTEA-ARPVLRAELPLQLAVPR 509
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
N S ++ G N KL++ LR LR +
Sbjct: 510 IQNLKARSSANQKSYGG------------------------NYDRKLFAKLRKLRKSIAD 545
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E+ + Y +F + TL +++++P T ELL +NG+G+ K+ ++G + I +
Sbjct: 546 ES--NIPPYVVFNDTTLLEMAEQMPITASELLSVNGVGQRKLERFGASFMAMIRDHV 600
>gi|145297285|ref|YP_001140126.1| ATP-dependent DNA helicase RecQ [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362038|ref|ZP_12962682.1| ATP-dependent DNA helicase RecQ [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142850057|gb|ABO88378.1| ATP-dependent DNA helicase RecQ [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356686673|gb|EHI51266.1| ATP-dependent DNA helicase RecQ [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 607
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 228/651 (35%), Positives = 338/651 (51%), Gaps = 83/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q EII ++G D VL PTGGGKSL +Q+PAL+ PG+ +V+SPL+SL
Sbjct: 17 QAVFGYQQFRPGQLEIIEQIVAGRDAMVLKPTGGGKSLCFQIPALLRPGLGVVVSPLISL 76
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ + E + + + KLLYV+PE++ + + + R
Sbjct: 77 MKDQVDSLRANGVAAIYINSALSREEMIQNFAAMRRG--EIKLLYVSPERLLQHEFMDRL 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E L IDEAHCVSQWGHDFRP+Y LG LKQ FP PV+ALTATA + +
Sbjct: 135 AELP-----LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRS 189
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGLSYGHFFLLKE 613
D++ L L + I SF+RPN+ ++ K AE+L G+ Y E
Sbjct: 190 DMLHRLELNDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 249
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KAA YH + AQR Q + KD+I I+ ATVAFGMGI+KP+VRFV+H
Sbjct: 250 EVAERLSRHGSKAAPYHAGLPLAQRQQTQDAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 309
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK+IE Y+QE GRAGRDG + +L Y +D RV+ ++ N
Sbjct: 310 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD----------------N 353
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ N + L+ L M ++ E CRR + L +FGE D K C NC
Sbjct: 354 IENPQQ-LQVEQYKLNVMAAFAEAQT-CRRQVLLNYFGEYND-----KPCGNCDICLDPP 406
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
KS+ D T+ A+K + V GQ F +++EV RGSLNQ +K H H+ LS +G GK
Sbjct: 407 KSY---DGTEDAQKALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQ 463
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ++R L+ + L + + + N+VL+ A
Sbjct: 464 SHEYWMSVIRQLIHKGLLTQNITR--------------------------NLVLQLTEA- 496
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
S + + ++ K L +L P + + + N +L+ LR LR + ++
Sbjct: 497 -SRPVLRGEM---KLELAVPRLQPISSRKEKRNGLLDNANYDKRLFKELRGLRKQIAED- 551
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E V Y +F +ATL +++ +P TE E+L ING+G K+ ++G ++ I
Sbjct: 552 -EEVPPYVVFNDATLVEMAQLMPMTEAEMLAINGVGHRKLERFGEAFMDLI 601
>gi|381395927|ref|ZP_09921621.1| ATP-dependent DNA helicase RecQ [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379328492|dbj|GAB56754.1| ATP-dependent DNA helicase RecQ [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 742
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 227/678 (33%), Positives = 365/678 (53%), Gaps = 83/678 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+VFG FR +Q+ II + G + +MPTGGGKSL YQLP ++ G+TLVISPL+SL
Sbjct: 17 KEVFGFDQFRASQQPIIENVLDGINTLAIMPTGGGKSLCYQLPGIVFDGLTLVISPLISL 76
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL--L 503
+QDQ+ L + N+ A L+ + E Q L + S + K LL++ PE V +S ++ L
Sbjct: 77 MQDQVRQLKELNVSACVLNSALSSQEYQHNLDSIVSGHTK--LLFLAPETVLQSSIISVL 134
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
+ ++ +A I IDEAHC+S+WGH+FRP+Y+ L L + F V+ALTATAT V
Sbjct: 135 KNVD-------VACIAIDEAHCISEWGHEFRPEYRQLHQLVEHFAKAVVIALTATATPRV 187
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFY 615
+ED+ + L + F SF+RPNL+++ + Q ++ G +
Sbjct: 188 REDIKRQLLISEDAEFMASFDRPNLYIEVAHKEKPYQQAKAFINKHPKQSGIIYCQSRSG 247
Query: 616 VVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
V L G+KA YH ++ +R+ Q ++ D+++II AT+AFGMGINKPDVR+V
Sbjct: 248 VDELATKLQNDGYKALPYHAGLNSQKRSDYQHKFVYDDVDIIVATIAFGMGINKPDVRYV 307
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H+ LPK+IEGY+Q+ GRAGRDG + C+L + Y D ++++ I Q
Sbjct: 308 LHYDLPKNIEGYYQQIGRAGRDGLNADCLLLFGYGDTGKIRYFIDQ-------------- 353
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
A R+ T +L M++ E+ +CRR++ L +FGE S C+ CDNC +
Sbjct: 354 MRDAQQKRL---ATMHLGHMLALAESQ-ECRRIVLLQYFGETNISQDCQH-CDNCLN-EG 407
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
D+T A+K + + TGQ+F +S+I +V RGS + + +++H LS + G+ L K
Sbjct: 408 KEASDLTVHAQKFLSCIHRTGQRFGASYIADVLRGSNAEKILQNQHNLLSTYNIGRELTK 467
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQN--VVLRFPSAI 908
+ + R L+ + + +E ++YG L++ Q A +++ G+ +L+ SA+
Sbjct: 468 KQWMTLSRQLIAKGLIEQE----EIYGG----LRLTQL-AGDVLKGKAPFLALLQQASAV 518
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
S K +++ +L P + L +L+ R L A
Sbjct: 519 GSAKTKATNLDAL-------QLEPEQ-----------------ALVDALKRKRKQL---A 551
Query: 969 GEGVM-AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFY 1027
EGV+ Y IF + +L ++ P++ + LL+I+G+G+AK+ KYG L I +E
Sbjct: 552 DEGVVPPYAIFADRSLNEMAHFFPQSHDSLLKIHGVGQAKLDKYGAIFLTIIVEYCREHG 611
Query: 1028 KTDKNGSSSNDSNDSGKR 1045
KT+ + + S S K+
Sbjct: 612 KTEVSNDAKATSTTSPKK 629
>gi|441498157|ref|ZP_20980358.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
gi|441438064|gb|ELR71407.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
Length = 728
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 226/661 (34%), Positives = 349/661 (52%), Gaps = 79/661 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L++ K+VFG + FR NQ IIN ++G + FV+MPTG GKSL YQLPAL+ G+ +VIS
Sbjct: 9 LKSKLKEVFGYNQFRGNQEAIINNILNGRNTFVIMPTGAGKSLCYQLPALVTDGLAIVIS 68
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+++Q+ L + A FL+ + E + +E KLLYV PE + K +
Sbjct: 69 PLIALMKNQVDQLNAFGVNAQFLNSTLTKAEMNRVKKETLD--GSIKLLYVAPESLTKEE 126
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ + ++ + +DEAHC+S+WGHDFRP+Y+ + + N P++ALTATAT
Sbjct: 127 NI-----DFLKKANVSFVAVDEAHCISEWGHDFRPEYRRIKEIIGLLGNLPIIALTATAT 181
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC--EKVAERLQVGLSYGH------FFLLK 612
V+ D+ + L + +F+ SFNR NL+ + +K A++ + H + L
Sbjct: 182 PKVQLDIQKNLHMEGADVFKSSFNRTNLFYEVRQKKHAKKQLIQFLRDHKGKSGIVYCLS 241
Query: 613 EFYVVSLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
VV + G KAA YH ++PA R Q + ++++I+ AT+AFGMGI+KPDV
Sbjct: 242 RKKVVEIAELLNVNGFKAAPYHAGLEPAVREKNQDDFLNEDVDIVVATIAFGMGIDKPDV 301
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H+ +PKS+EGY+QE GR+GRDG C+++YS++D +++ + P
Sbjct: 302 RFVVHYDVPKSLEGYYQETGRSGRDGLEGKCLMFYSHNDINKLEKF--------NKDKPV 353
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
R N RVL L M Y E+ V CRR L +FGE+F +C+ CDNC
Sbjct: 354 QEREN----ARVL------LQEMSFYAESPV-CRRKQLLHYFGEEFTFDNCE-MCDNCVV 401
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K E + AK VE TG++F +H+++V RG NQYVK + H L ++G G
Sbjct: 402 PKDKYE--AKEYAKLAVEAALKTGERFGLNHLVDVIRGVENQYVKSYDHHILDIYGNGNE 459
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ ++R +I + L +++ D G VLKV+ GR+ L P +
Sbjct: 460 ESGDFWKSVVRQSLIYELLEKDI---DNIG----VLKVSAK-------GRE--FLNNPYS 503
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSS--LRMLRTLLV 965
I+ K DT + ++ +S K Y ML++L
Sbjct: 504 ISFAK------------------DHEYTDTGDEEESSERTPVSTKAYDEALFNMLKSLRK 545
Query: 966 KEAGEGVMA-YHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
K A + + Y IF + +L+ ++ P TEEE+ +ING+G KV K+G L+ I +
Sbjct: 546 KIAHQKELPPYVIFQDPSLEEMATTYPTTEEEMAQINGVGMGKVKKFGQEFLDLISEYVD 605
Query: 1025 E 1025
E
Sbjct: 606 E 606
>gi|299473691|emb|CBN78084.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 645
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/449 (41%), Positives = 269/449 (59%), Gaps = 42/449 (9%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
++ N+++FGN+ FR Q +I AT+ G D FVLMPTGGGKSL YQLPA + G+T V+S
Sbjct: 208 MDDANREIFGNNGFRGVQERVIRATLCGRDCFVLMPTGGGKSLCYQLPACLSKGVTFVMS 267
Query: 441 PLVSLIQDQIMHLLQA---NIPATFLSGNMEWTEQQEILRELN-SDYCK---YKLLYVTP 493
PL+SLI+DQ+ LL+A IPA L+ T ++I ++L +D + KLLYVTP
Sbjct: 268 PLLSLIEDQVTQLLKAPCGGIPAAHLTSATPTTAIKQIYKDLGRADRDREPSVKLLYVTP 327
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ SD +L + LN + +LAR VIDEAHCVS WGHDFRPDY LG K+ FPN P++
Sbjct: 328 ERLGNSDSMLDFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGYFKKTFPNVPII 387
Query: 554 ALTATATASVK---EDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFL 610
ALTATAT +V+ EDV+++L LVN F QSFNR NL E+ +++ + Y F+
Sbjct: 388 ALTATATTTVRPVMEDVIKSLRLVNPTKFIQSFNRTNLVFRVEEKPDKINDAMEYVADFI 447
Query: 611 LKE-----------FYVVSLECGH----------KAAFYHGSIDPAQRAFVQKQWSKDEI 649
K+ F + +E A +YH A+R VQ W + EI
Sbjct: 448 KKQNSKNGGRCAMVFPLSVMETSALSDFLRKKKISADYYHAGQGAAERKSVQGSWQRGEI 507
Query: 650 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIR 709
+++CAT+A+GMGI+KPDVR+V+H S+ KS+EGY+QE GRAGRDG+R+ C++ + D +
Sbjct: 508 SVVCATIAYGMGIDKPDVRYVVHMSIAKSVEGYYQEAGRAGRDGRRAECLMLFRGPDVSK 567
Query: 710 VKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHF 769
+K+++ F R A + R L+ L RM YC + CRR +F
Sbjct: 568 MKNLVMG-------FGKRRARRTSAATTRQLDM----LERMKDYCLEEGVCRRKFLARYF 616
Query: 770 GEKFDSAHCKKTCDNCSKIKSFIEKDVTD 798
GE++ ++ C CD+C+K + + +D
Sbjct: 617 GEEYKASMCNGMCDHCAKRAPSVHRRTSD 645
>gi|109896583|ref|YP_659838.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas atlantica T6c]
gi|109698864|gb|ABG38784.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas atlantica T6c]
Length = 602
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 214/650 (32%), Positives = 345/650 (53%), Gaps = 82/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG FR QR++I + GHDV VLMPTGGGKSL YQ+PAL+ G+T+V+SPL++L
Sbjct: 16 KTVFGYDEFRDGQRDVIEKILQGHDVLVLMPTGGGKSLCYQIPALVLEGLTIVVSPLIAL 75
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+ + + A +++ N+ E + R + + YKL+YV PE++ + D + R
Sbjct: 76 MKDQVDALVASGVSAAYINSNLSSEEIHNVYRGMQDGH--YKLIYVAPERLMQFDFIQR- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L SL LA +DEAHCVS WGHDFR +Y+ LG LKQ+FP PV+ LTATA + +
Sbjct: 133 LHSLE----LALFAVDEAHCVSHWGHDFRKEYRRLGQLKQQFPTVPVVGLTATADITTRS 188
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-------WMDCEKVAERLQVGLSYGHFFL-----LKE 613
D++Q L L + IF+ SF+RPN+ + ++V + ++ G + + +
Sbjct: 189 DILQQLALQDPFIFKGSFDRPNIRYNQLFKYKATDQVIQYVKQQEGSGIIYCNSRKKVDD 248
Query: 614 FYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G A YH ++ R +Q+ + +D I+II ATVAFGMGINK +VRFV+H
Sbjct: 249 LSIALARQGINCAGYHAGLEGPIRDKIQRDFIQDNIDIIVATVAFGMGINKSNVRFVVHF 308
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LP+S+E Y+QE GRAGRDG + +L + D R++ I G +P R ++
Sbjct: 309 DLPRSVEAYYQETGRAGRDGMPAEALLLFDEKDAARIRQWIGMG---DNP-----ERLDI 360
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIKSFI 792
E + + + CRR + L +F E SAH CD C K F
Sbjct: 361 -------ELQKFAAMEAFAEAQT---CRRQVLLNYFSEY--SAHDCGNCDICLDPPKRF- 407
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+ ++ + GQ +S ++++V RG + + + H++LS GK + +
Sbjct: 408 --DGTVPAQMVLSCIYRLGQNVASQYVIDVLRGKKLKRIVEQGHDSLSTFAIGKDKSDAH 465
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS-AINST 911
I+ L+ + FL ++ + S+VLK+ + +A ++ G+ + L P I+S
Sbjct: 466 WHNIINQLIHKGFLRIDITQ-------SAVLKLTE-EARGVLAGKLELALAVPRLTIDSG 517
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K SK ++N KL++ L+ LR + + E
Sbjct: 518 KKSKLK----------------------------EMNYDRKLFAKLKHLRKSIAQR--ED 547
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
V + +F +ATL ++ ++P+++ + LE+NG+G+ K+ +YG L I +
Sbjct: 548 VPPFVVFSDATLADMADKLPQSKTDFLEVNGVGQTKLDRYGSEFLAAISA 597
>gi|260774489|ref|ZP_05883403.1| ATP-dependent DNA helicase RecQ [Vibrio metschnikovii CIP 69.14]
gi|260610616|gb|EEX35821.1| ATP-dependent DNA helicase RecQ [Vibrio metschnikovii CIP 69.14]
Length = 611
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 225/650 (34%), Positives = 347/650 (53%), Gaps = 81/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+E+I A ++G D V+MPTGGGKSL YQ+PAL+ PG+T+VISPL+SL
Sbjct: 21 REVFGYQTFRVGQQEVIEAAIAGQDSLVIMPTGGGKSLCYQIPALVFPGLTVVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ ++ I +N + KLLYV+PE+V +D + R
Sbjct: 81 MKDQVDQLKANGVAAECVNSSLSRETLIAIYNRINRG--QIKLLYVSPERVLMADFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L LA I +DEAHC+SQWGHDFR +Y LG LKQ FP+ P +ALTATA + +
Sbjct: 138 LQQLP----LAMIAVDEAHCISQWGHDFRREYASLGQLKQVFPHVPFMALTATADDATRI 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++ L L N + SF+RPN+ + EK +R Q G+ Y E
Sbjct: 194 DILHRLQLANPHTYLGSFDRPNIRYTLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVE 253
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
L C G +AA YH ++ +RA+VQ+ + +D++ I+ ATVAFGMGINK +VRFV+
Sbjct: 254 MLTEKL-CNNGIRAASYHAGMEVDERAYVQEAFQRDDVQIVVATVAFGMGINKSNVRFVV 312
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H +P++IE Y+QE GRAGRDG + ++ Y +D + ++ M+ + E+ P
Sbjct: 313 HFDIPRNIESYYQETGRAGRDGLPAEAIMLYDPADIVWLRRMLDE--KEEGPQK------ 364
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIKS 790
+ + L M + E CRR + L +FGE D+ C CD C K
Sbjct: 365 ---------QVESHKLTAMSHFAEAQT-CRRQVLLNYFGEYRDTP-C-GNCDVCLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ +K + V Q F +++EV RG N ++++ H+ LS +G G+ +
Sbjct: 413 F---DATEQVRKALSCVYRVQQSFGIGYVVEVLRGMQNIRIRENGHDKLSTYGLGRDHSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A ++ G + V L P +
Sbjct: 470 DYWVSIFRQLIHKGLLQQNITR-------NSTLQLTE-EARPILRGDKAVELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ KSD KLS + N KL++ LR LR L E E
Sbjct: 522 ARAVKSD-----------KLS--------------NKNYDKKLFAKLRKLRKSLADE--E 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
G+ Y +F +ATL ++ +P + E+L +NG+G+ K+ KY L+ I+
Sbjct: 555 GLPPYVVFSDATLIDMADILPTSYGEMLAVNGVGQRKLEKYADPFLDVIQ 604
>gi|383768835|ref|YP_005447898.1| ATP-dependent DNA helicase [Bradyrhizobium sp. S23321]
gi|381356956|dbj|BAL73786.1| ATP-dependent DNA helicase [Bradyrhizobium sp. S23321]
Length = 621
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 230/648 (35%), Positives = 342/648 (52%), Gaps = 66/648 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q EII +G + VLMPTGGGKSL YQLP+L+ G +V+SPL++L++
Sbjct: 25 VFGLPGFRGAQGEIIRHVTNGGNCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLIALMR 84
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL+A + A L+ ++ E +I R L + LLYV PE++ L
Sbjct: 85 DQVAGLLEAGVNAAALNSSLTLQEASDIERRLIAG--DLDLLYVAPERLVTPRCL----- 137
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
S+ A+ +A IDEAHCVSQWGHDFRP+Y GL ++ ++FPN P +ALTATA ++++
Sbjct: 138 SMLAQAKVALFAIDEAHCVSQWGHDFRPEYVGLSVIAERFPNVPRIALTATADDLTRKEI 197
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHK 624
V+ L L F SF+RPN+ +D +L+ + H Y +S +
Sbjct: 198 VERLQLGGSPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERHAGDAGVVYCLSRNRVEE 257
Query: 625 AAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
A YH +D + R+ Q ++ ++ +I AT+AFGMGI+KPDVRFV H
Sbjct: 258 VAAALADAGIAALPYHAGLDSSVRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHL 317
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S+ + Y SD ++ + MI + A + F
Sbjct: 318 DLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDESTAS--------DDFKR 369
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
A+ G+ L +V E CRR L +FGE D A+C CDNC
Sbjct: 370 ASIGK--------LDALVGLAET-AQCRRKRLLGYFGETLDGANC-GNCDNCLTPPQM-- 417
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
+D A+KL+ TGQ+F + H+++V G L + V + H+ LS+ G G+ L + +
Sbjct: 418 RDGKVLAQKLLSCAYRTGQRFGAMHLIDVLIGRLTEKVTQFGHDKLSVFGIGRELNEKQW 477
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+LR LV L + S+ +G+ LK+ +S A ++ G V LR + T++
Sbjct: 478 RTVLRQLVAMGHLQSD---SEAFGA----LKLTES-ARGVLRGETEVWLREEAP--GTRI 527
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
S +G L+P+ N PQ +VD L A+ LR R+ + +E GV
Sbjct: 528 RSSRAKSRRGD-----LAPAAN----TPQGDVDPELRAR----LRSWRSDIARE--RGVP 572
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
AY + +AT+ + + P T +EL + GIG K+ YG LL+ + +
Sbjct: 573 AYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVRT 620
>gi|307609659|emb|CBW99166.1| hypothetical protein LPW_09501 [Legionella pneumophila 130b]
Length = 608
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 226/649 (34%), Positives = 346/649 (53%), Gaps = 81/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFRP Q +II +SG DV VLMPTGGGKSL YQ+PA++ G+ +V+SPL++L
Sbjct: 19 KKYFGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRRGVGIVVSPLIAL 78
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A + + ++ E + +L +L+ + + LLY+ PE++ + L R
Sbjct: 79 MEDQVTALKLQGIRAAYYNSSLTAEEARNVLNQLHHN--ELDLLYIAPERLISTSFLDRL 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E ++ IDEAHC+SQWGHDFRP+Y LG+LK FP+ P++ALTATA +E
Sbjct: 137 SECT-----ISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIALTATADKQTRE 191
Query: 566 DVVQALGLVNCIIFRQSFNRPNL------------WMDCEKVAERLQVGLSY-GHFFLLK 612
D+V L + SFNRPN+ ++ ++ Q G+ Y G ++
Sbjct: 192 DIVTKLN-YQPKKYVVSFNRPNIHYKVVPKTNAVKQLNLFLQSDTQQSGIIYCGTRHTVE 250
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E G KA YH + +R VQ + D I+I+ AT+AFGMGI+KP+VRFV+H
Sbjct: 251 HLTAKLQELGLKARAYHAGLSHTERREVQNLFRYDRIDIVVATIAFGMGIDKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H LPKSIEGY+QE GRAGRDG + +L Y +D R++ I N
Sbjct: 311 HDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWI----------------MN 354
Query: 733 VA-NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ + R +ETN N M+++ E CRR + L +F E C K CD C
Sbjct: 355 IPLDEQRHIETNKLN--HMLAFAEAS-HCRRQILLRYFDEP-SHTEC-KNCDVCDNPPQ- 408
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A+K + + Q + +H ++V RGSL++ +K+ HE LS G GK + +
Sbjct: 409 -TADATEDAQKFLSCIYRLKQSYGLTHTIDVLRGSLSEKIKQSGHEHLSTFGIGKEKSAN 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP-SAINS 910
+ L+ +D+ ++++ + VL++ KA L+ G +++ L P + +NS
Sbjct: 468 YWKHLAWQLIHKDYCLQDMNHFN-------VLRLT-PKAIPLLKGEESISLTIPNNDLNS 519
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+K GK SPS +P+ S L+ LR LR L E E
Sbjct: 520 SK-------------KKGKQSPS-----FKPE-------SNPLFEKLRALRRQLADE--E 552
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ IF +ATL +++ P+ ++LL ++G+G+ K+++YG LE +
Sbjct: 553 NKPPFMIFSDATLHEMAQLKPKNSKQLLNVSGVGQHKLARYGHYFLEAL 601
>gi|340781475|ref|YP_004748082.1| ATP-dependent DNA helicase RecQ [Acidithiobacillus caldus SM-1]
gi|340555628|gb|AEK57382.1| ATP-dependent DNA helicase RecQ [Acidithiobacillus caldus SM-1]
Length = 611
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 228/674 (33%), Positives = 335/674 (49%), Gaps = 91/674 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q +I + G D VLMPTGGGKSL YQ+PAL PG +V+SPL++L
Sbjct: 13 QHVFGFSDFRPPQDAVIARLLGGGDALVLMPTGGGKSLCYQVPALTLPGTAVVVSPLIAL 72
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L Q + A L + E Q I L+ + KLLYV PE++ + L
Sbjct: 73 MEDQVQALQQYGVSAHALHSGLGVDETQRIEEALSRG--EIKLLYVAPERLLQERSL--- 127
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L AR ++ IDEAHCVSQWGHDFRP+Y L +L ++FP+ P +ALTATA +E
Sbjct: 128 --RLLARLDISLFAIDEAHCVSQWGHDFRPEYLRLQLLHERFPSVPRVALTATADPRTRE 185
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE--RLQVGLSYGHFFLLKEFYVVSL---- 619
++ LGL+ +F++SF+RPN+ + E R Q+ L + H + K+ +V
Sbjct: 186 EIRSRLGLLQAPVFQRSFDRPNIHYRLQSGGESGRQQL-LHFIHQYHAKDSGIVYCLSRK 244
Query: 620 ----------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
E G A YH +D A R Q + DE+ I+ AT+AFGMGI+KPDVRF
Sbjct: 245 RVEETAQWLKEQGLSALPYHAGLDAATRRRHQAMFQNDEVRIVVATIAFGMGIDKPDVRF 304
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
V H +LPKS+E Y+QE GRAGRDG + L+Y D ++++ MI Q A+ + H
Sbjct: 305 VAHLNLPKSLESYYQETGRAGRDGLPADAWLHYGLQDVVQLRQMIQQSGADAA-----HK 359
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
+ E L M+ CE V CRR L +FGE D C CDNC
Sbjct: 360 ALEL-----------ERLEAMLGLCET-VGCRRRELLAYFGEHLDRP-C-GNCDNCVAPP 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ + ++ A+K + V TGQ+F H+++V G + ++ H LS+ G G+ L
Sbjct: 406 AVW--NASEAAQKALSTVHRTGQRFGVQHLIDVLLGRDHPRLRSFGHHELSVFGIGRDLP 463
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ + RHL + ++ + + +A ++ G + V +R P+ +
Sbjct: 464 ANTWRSLFRHLALRGQVLPHPEGHGGF--------CLGPRARPVLRGEEEVWIRAPAEED 515
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
K + + SP S PQ+E L+ +LR LR L +
Sbjct: 516 RPKHATA--------------SPG-----SAPQDE--------LWEALRALRLELAR--A 546
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKT 1029
GV Y IF ++TLQ + +R PR L I G+G+ K+ +G L +
Sbjct: 547 RGVPPYVIFHDSTLQEIRRRQPRDRATLAAIPGVGERKLENFGDAFLRLLRQ-------- 598
Query: 1030 DKNGSSSNDSNDSG 1043
+ G S + D G
Sbjct: 599 -RGGGSGPAACDDG 611
>gi|88812165|ref|ZP_01127417.1| ATP-dependent DNA helicase RecQ [Nitrococcus mobilis Nb-231]
gi|88790669|gb|EAR21784.1| ATP-dependent DNA helicase RecQ [Nitrococcus mobilis Nb-231]
Length = 615
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 228/657 (34%), Positives = 345/657 (52%), Gaps = 87/657 (13%)
Query: 382 EANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISP 441
E+ K FG +FR +Q+ II G D VLMPTGGGKSL YQ+PAL+ PG +V+SP
Sbjct: 4 ESILKTTFGFDAFRGSQQAIIETLTRGTDALVLMPTGGGKSLCYQIPALLRPGCGVVVSP 63
Query: 442 LVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDV 501
L++L+ DQ+ L QA + A +L+ ++ EQ+ + +++ L+Y+ PE++ +
Sbjct: 64 LIALMADQVAALRQAGVAAAYLNSSLSAAEQRAVEQQMLVG--ALDLVYIAPERLLQP-- 119
Query: 502 LLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATA 561
R L+ LN E+ A IDEAHCVSQWGHDFRP+Y L L ++F +TP +ALTATA
Sbjct: 120 --RCLDLLNRCEI-ALFAIDEAHCVSQWGHDFRPEYLQLAALAERFADTPRIALTATADG 176
Query: 562 SVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE-------F 614
+ ++V+ L L F SF+RPN+ C +VAER G + F+ +E
Sbjct: 177 PTRCEIVERLRLHEARQFIHSFDRPNI---CYRVAER-GGGRAQLLRFIAEEHANEAGIV 232
Query: 615 YVVSL-----------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y +S E G A YH +D A RA Q++++++E ++ ATVAFGMGI+
Sbjct: 233 YCLSRNKVEQTAAWLREQGIAALPYHAGLDHAARAAHQRRFAREEALVVVATVAFGMGID 292
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVRFV H LP SIEGY+QE GRAGRDG+ ++ L Y +D ++ + MI EQS
Sbjct: 293 KPDVRFVAHLDLPASIEGYYQETGRAGRDGRPANAWLLYGLADVVQRRRMI-----EQSE 347
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+ G R L M++YCE CRRL L +FGE+ +A C
Sbjct: 348 SSEGRKRI-----------ERHKLDAMLAYCEI-CSCRRLHLLRYFGEQPRTA-----CG 390
Query: 784 NCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + E D T+ A+KL+ V TGQ+F + +++ RG ++ + H LS
Sbjct: 391 NCDTCLAPPETWDATEAARKLLSAVYRTGQRFGAQYLIAHLRGERDERAARFGHTQLSTF 450
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G + + ++R LV +L ++ YG L++++ +A L+ G Q + L
Sbjct: 451 GIGADFSPRQWGSLIRQLVAYGYLDVDLVG---YGG----LRLDE-RARPLLRGEQALRL 502
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
R K + + + ++ + +P L+ +LR LR
Sbjct: 503 R-----RDRKAHRPSARIKRHTEIAAEATP--------------------LWEALRALRK 537
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
L E +GV Y IF + TL + R P ++ E L ++G+G+ K++ YG ++ I
Sbjct: 538 QLAAE--QGVPGYVIFPDTTLLEMVARRPASDAEFLALSGVGQKKLAAYGAPFMQVI 592
>gi|395645903|ref|ZP_10433763.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
gi|395442643|gb|EJG07400.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
Length = 724
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 215/653 (32%), Positives = 342/653 (52%), Gaps = 75/653 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ +G SF P Q+EII + + GHD +M TGGGKSL YQLPAL+ G+T+VISPL++L
Sbjct: 9 QRYWGYTSFLPYQKEIITSVLDGHDTLAVMATGGGKSLCYQLPALVLGGLTIVISPLIAL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+++Q+ L + I A + +++ E+ E+ R L ++ ++L+++PEK + L
Sbjct: 69 MKNQVDDLNERGIRAVAYNSTLDYRERVEVERGLQNN--TVRMLFISPEKCMQPSFL--- 123
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
S R + I IDEAHC+S+WGH+FRP+Y+ L L++ FP P++ALTATA +V+E
Sbjct: 124 --SFINRFPVRLIAIDEAHCISEWGHNFRPEYRQLSALREHFPPVPIVALTATAIPAVRE 181
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLL-----K 612
D+ L L + + SFNRPNL + ++ L Y G + L +
Sbjct: 182 DICTQLQLSDVREYIGSFNRPNLSYRVVPKNKPVEFILDYIGQHPNDSGIIYCLSRKATE 241
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+ +E GH A+ YH + P R VQ+ + KD+I+IICATVAFGMGI+KPDVR+VIH
Sbjct: 242 DLAETLVEHGHMASAYHAGLLPEVRKKVQEAFIKDDISIICATVAFGMGIDKPDVRYVIH 301
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H LPKS+E Y+QE GRAGRDGQ C+L YS D +V++++ H+ +
Sbjct: 302 HDLPKSVEAYYQESGRAGRDGQPGECILLYSRGDLAKVRYLLE------------HDDQD 349
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
SG + E +V YCE + CRR L +FGE++ C CDNC+ +
Sbjct: 350 EEQSGIAFKKMQE----VVDYCETN-SCRRKYLLAYFGEEYPGETC-DACDNCTHPQELF 403
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+ ++ V+ ++ + I ++ GS + + R + L + GK ++
Sbjct: 404 --DGTGVAQNIIRCVRQLPTKYGAGMITDILLGSKKAEIGRLRFDALPAYATGKGYDRNT 461
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ LV + +L + D Y ++ K + I R V + P + T+
Sbjct: 462 YLTWIGDLVRQGYLS---RTGDKYPVIALTAKSEE-------ILRGGVPVMLP-LLQKTR 510
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+S+V P ++ TP + +L+ +L+ +R L E V
Sbjct: 511 QRRSEV-PGPDAM-----------TPEE----------GELFLALKRVRKDLADR--ENV 546
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
Y IF + TL +++ P +E +L I G+G+ K K+G + I+ ++E
Sbjct: 547 PPYIIFSDRTLMQMARLRPCDQESILAIGGVGEYKSKKFGPAFIAEIKRVVQE 599
>gi|336452159|ref|ZP_08622591.1| ATP-dependent DNA helicase RecQ [Idiomarina sp. A28L]
gi|336280975|gb|EGN74260.1| ATP-dependent DNA helicase RecQ [Idiomarina sp. A28L]
Length = 623
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 215/641 (33%), Positives = 335/641 (52%), Gaps = 81/641 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FR Q EII+ + G D L+PTG GKS+ YQLPA++ PG+T+V+SPLVSL
Sbjct: 35 RDVFGYDKFRFGQEEIISNVLQGRDTLALLPTGAGKSMCYQLPAMLLPGVTIVVSPLVSL 94
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+ DQ+ + + I A + + E + R+L+S + K+LY+ PE++ L R
Sbjct: 95 MDDQVAAMRELGIAAGAIHSGLNAPEVMDTFRKLHSG--ELKVLYLAPERL-----LQRS 147
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ ++ I +DEAHC+SQWGHDFRP+Y LG ++++ P PVLALTATA A ++
Sbjct: 148 FQERLQEVQVSLIAVDEAHCISQWGHDFRPEYGQLGEVREQLPGAPVLALTATADAVTRQ 207
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSY-GHFFLLK 612
D+++ L L + + + SF+RPN+ ++ EK R QV G+ Y G +
Sbjct: 208 DIIERLHLDDSALVQGSFDRPNIRYLVQEKYKPRTQVLKYVKRQRGASGIIYCGSRKRTE 267
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E + + G +AA Y+ + QRA + + +D+I++I ATVAFGMGINKP+VRFV+H
Sbjct: 268 ELAEMLMREGIRAAAYNAGLPHDQRAAALQGFIRDDIDVIVATVAFGMGINKPNVRFVMH 327
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LP+S+E Y+QE GRAGRDG + V+ Y SD V ++ E+ TP
Sbjct: 328 YDLPRSVEAYYQETGRAGRDGAAAEAVMLYEPSDAAWVWKIL-----EEHDETPQ----- 377
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
L + M S+ E CRR++ L +F E D K C NC I+
Sbjct: 378 -------LRVEKQKFSAMTSFAEAQT-CRRVVLLNYFNEYRD-----KACGNCDLCIQPP 424
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D T A+K + V TGQQF H+++V RGS NQ +K+ HE LS +G G +
Sbjct: 425 RQYDGTVDAQKALSCVYRTGQQFGVHHVVDVLRGSQNQKIKQFNHEQLSTYGIGSDHSAE 484
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ L++++++ V +A ++ G + L P +
Sbjct: 485 YWVSVLRQLIHRGLLLQDIRRHSAL--------VLTEEARPVLRGEVALTLAEPRLATTA 536
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+L N Q Q++ L+ L+ LR + ++ EG
Sbjct: 537 QL---------------------NSVVEQGQHD------KALFRRLKKLRKEIAEK--EG 567
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+ +F + +LQ ++ +P TE E L ++G+G+ K+ +YG
Sbjct: 568 KPPFVVFSDVSLQEMALLLPSTESEFLRVSGVGQIKLERYG 608
>gi|255020906|ref|ZP_05292962.1| ATP-dependent DNA helicase RecQ [Acidithiobacillus caldus ATCC 51756]
gi|254969697|gb|EET27203.1| ATP-dependent DNA helicase RecQ [Acidithiobacillus caldus ATCC 51756]
Length = 611
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 228/674 (33%), Positives = 334/674 (49%), Gaps = 91/674 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q +I + G D VLMPTGGGKSL YQ+PAL PG +V+SPL++L
Sbjct: 13 QHVFGFSDFRPPQDAVIARLLGGGDALVLMPTGGGKSLCYQVPALTLPGTAVVVSPLIAL 72
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L Q + A L + E Q I L+ + KLLYV PE++ + L
Sbjct: 73 MEDQVQALQQYGVSAHALHSGLGVDETQRIEEALSRG--EIKLLYVAPERLLQERSL--- 127
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L AR ++ IDEAHCVSQWGHDFRP+Y L +L ++FP+ P +ALTATA +E
Sbjct: 128 --RLLARLDISLFAIDEAHCVSQWGHDFRPEYLRLQLLHERFPSVPRVALTATADPRTRE 185
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE--RLQVGLSYGHFFLLKEFYVVSL---- 619
++ LGL+ +F++SF+RPN+ + E R Q+ L + H + K+ +V
Sbjct: 186 EIRSRLGLLQAPVFQRSFDRPNIHYRLQSGGESGRQQL-LHFIHQYHAKDSGIVYCLSRK 244
Query: 620 ----------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
E G A YH +D A R Q + DE+ I+ AT+AFGMGI+KPDVRF
Sbjct: 245 RVEETAQWLKEQGLSALPYHAGLDAATRRRHQAMFQNDEVRIVVATIAFGMGIDKPDVRF 304
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
V H +LPKS+E Y+QE GRAGRDG + L+Y D ++++ MI Q A+ + H
Sbjct: 305 VAHLNLPKSLESYYQETGRAGRDGLPADAWLHYGLQDVVQLRQMIQQSEADAA-----HK 359
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
+ E L M+ CE V CRR L +FGE D C CDNC
Sbjct: 360 ALEL-----------ERLEAMLGLCET-VGCRRRELLAYFGEHLDRP-C-GNCDNCVAPP 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ + ++ A+K + V TGQ+F H+++V G + ++ H LS+ G G+ L
Sbjct: 406 AVW--NASEAAQKALSTVHRTGQRFGVQHLIDVLLGRDHPRLRSFGHHELSVFGIGRDLP 463
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ + RHL + ++ + + +A ++ G + V +R P+ +
Sbjct: 464 ANTWRSLFRHLALRGQVLPHPEGHGGF--------CLGPRARPVLRGEEEVWIRAPAEED 515
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
K + + SP S PQ+E L+ +LR LR L +
Sbjct: 516 RPKHATA--------------SPG-----SAPQDE--------LWEALRALRLELAR--A 546
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKT 1029
GV Y IF + TLQ + +R PR L I G+G+ K+ +G L +
Sbjct: 547 RGVQPYVIFHDITLQEIRRRQPRDRATLAAIPGVGERKLENFGDAFLRLLRQ-------- 598
Query: 1030 DKNGSSSNDSNDSG 1043
+ G S + D G
Sbjct: 599 -RGGGSGPAACDDG 611
>gi|332534725|ref|ZP_08410553.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035812|gb|EGI72296.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas haloplanktis
ANT/505]
Length = 596
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 227/664 (34%), Positives = 340/664 (51%), Gaps = 99/664 (14%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
+K E K+VFG FR Q+ +I+A ++G D VL+PTGGGKS+ YQ+PAL+ G+T+V
Sbjct: 2 RKPETVLKQVFGYSEFRDGQKAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIV 61
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
ISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ + KLLYV PEKV +
Sbjct: 62 ISPLISLMQDQVTQLQALGVKAAYVNNSLAREEQQLVYQQLHQG--QIKLLYVAPEKVLQ 119
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
+ L R L LN ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTAT
Sbjct: 120 REFLER-LSHLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTAT 174
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE----- 613
A + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 175 ADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKSQS 229
Query: 614 --FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGM 660
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFGM
Sbjct: 230 GIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGM 289
Query: 661 GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAE 720
GINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+ E
Sbjct: 290 GINKPNVRFVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDE 349
Query: 721 QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKK 780
Q RFN M S+ E CRR + L +F E + ++
Sbjct: 350 QRRRVE-EQRFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQRE 386
Query: 781 TCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
C NC KSF D T A++ + V GQ+F +I+E+ RG+ ++ + H
Sbjct: 387 PCGNCDICLNPPKSF---DGTLVAQQALSCVYRAGQRFGLGYIVELLRGANTSRIRDNNH 443
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
LS +G GK + ILR L+ + L +++ +
Sbjct: 444 HELSTYGIGKDKSSEFWLSILRQLIHQGLLSQDITQG----------------------- 480
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEV-DLNLSAKLYS 955
S +L+++ KG + +L+ R Q+++ N KL++
Sbjct: 481 ------------ASLRLTEAARVILKGE-YALQLAEPRLQAKHVYQDKLAQFNYDKKLFA 527
Query: 956 SLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRL 1015
LR LR L + V Y +F + TL +++ +P + E L+++G+G K++KYG
Sbjct: 528 RLRALRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGEF 585
Query: 1016 LETI 1019
L I
Sbjct: 586 LTAI 589
>gi|145632079|ref|ZP_01787814.1| ATP-dependent DNA helicase [Haemophilus influenzae 3655]
gi|145634861|ref|ZP_01790569.1| organic solvent tolerance protein [Haemophilus influenzae PittAA]
gi|144986986|gb|EDJ93516.1| ATP-dependent DNA helicase [Haemophilus influenzae 3655]
gi|145268027|gb|EDK08023.1| organic solvent tolerance protein [Haemophilus influenzae PittAA]
Length = 619
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 222/651 (34%), Positives = 344/651 (52%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ + +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQRVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ + RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAMLRGMHNQKIIERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|186683728|ref|YP_001866924.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
gi|186466180|gb|ACC81981.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
Length = 719
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 231/664 (34%), Positives = 354/664 (53%), Gaps = 88/664 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRP QR+II + D+ ++MPTGGGKSL +QLPALI G+T+V+S
Sbjct: 7 LEQALKYHFGYDRFRPGQRQIIEDALQNRDLLIVMPTGGGKSLCFQLPALIKKGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L NI ATFL+ ++ + + RE K +LLYV PE++ S+
Sbjct: 67 PLIALMQDQVEGLRNNNINATFLNSSLNPYKVRS--REEAILSGKVRLLYVAPERLL-SE 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ + + +A IDEAHCVS+WGHDFRP+Y+ + L++++P+ P LALTATAT
Sbjct: 124 RFLPFLDLVKEKIGIAAFAIDEAHCVSEWGHDFRPEYRQMKSLRKRYPDVPTLALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFF-LLKE------ 613
V+ D++Q LGL I SFNR NL+ + R + +Y L++E
Sbjct: 184 DRVRADIIQQLGLKQPSIHIASFNRQNLYYEV-----RSKTKSAYAELLELIRENEGSAI 238
Query: 614 FYVVSLECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y ++ + + F YH + +R+ Q ++ +D++ ++ AT+AFGMGI
Sbjct: 239 IYCLTRKKVDELTFKLQNDKISALSYHAGLSDEERSSNQTRFIRDDVRVMVATIAFGMGI 298
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
NKPDVR VIH LP+++E Y+QE GRAGRD + S C L++S+SD ++ I Q Q
Sbjct: 299 NKPDVRLVIHFDLPRNLESYYQESGRAGRDSEPSRCTLFFSFSDIKTIEWSIDQKTDPQE 358
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
+ L +++ Y + V CRR +QL +FGE+FD +C C
Sbjct: 359 QLIA-----------------KQQLRQVIDYAQGTV-CRRTIQLGYFGERFD-GNC-ANC 398
Query: 783 DNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
DNC K +D T A K + V ++F HI++V RG+ +Q + ++ H+ LS +
Sbjct: 399 DNCRYPKPM--QDWTIEAMKFLSCVARCKERFGMLHIIDVLRGAKSQKIIQNEHDQLSTY 456
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV- 901
G GK + E R+L ++ L+E+ SD Y SVLK+N ++ RQ V
Sbjct: 457 GIGKDKSVDEW-RMLARSLLHQGLVEQT--SDGY----SVLKLNPLSWE--VMRRQRTVS 507
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
L P A +T +G S+ E ++ L LR LR
Sbjct: 508 LAVPVA--------QKITWEEG---------------SEKAAEAEI-----LMQRLRSLR 539
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
L E + V Y +F ++TL+ +++ P+T E +++G+G K+S+YG + L I +
Sbjct: 540 KQLADE--QSVPPYVVFQDSTLKVMAQVQPKTLTEFGKLSGVGSHKLSQYGDKFLTEIRA 597
Query: 1022 TIKE 1025
+E
Sbjct: 598 YRQE 601
>gi|300714809|ref|YP_003739612.1| ATP-dependent DNA helicase [Erwinia billingiae Eb661]
gi|299060645|emb|CAX57752.1| ATP-dependent DNA helicase [Erwinia billingiae Eb661]
Length = 608
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 342/652 (52%), Gaps = 79/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q+ II A+++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 17 QETFGYQHFRPGQQSIIQASLNGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISL 76
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQE++ + K +LLY+ PE++ D L
Sbjct: 77 MKDQVDQLLANGVSAACLNSTQTREEQQEVMAGCRTG--KVRLLYIAPERLMM-DNFLDN 133
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N A + +DEAHC+SQWGHDFRP+Y LG L+Q+ P+ PV+ALTATA + +
Sbjct: 134 LLHWNP----AMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMALTATADETTRN 189
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ + L L + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 190 DIARLLQLDDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGIIYCNSRAKVE 249
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D A RA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 250 DTAARLQSRGLSVGAYHAGMDNAHRAQVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 309
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ + E++P
Sbjct: 310 FDIPRNIESYYQETGRAGRDGLPAEALMLYDPADMAWLRRCLD----EKAP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE ++ CDNC
Sbjct: 357 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QQPCDNCDICLDPP 406
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + GQ+F +I+EV RG+ NQ ++ +H+ L ++G GK +
Sbjct: 407 RRYDGLVEAQKALSGIYRVGQRFGMGYIVEVLRGANNQRIRDMQHDKLPIYGIGKDQSHE 466
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ + + + ++ S L++ ++ A ++ G +++L P +
Sbjct: 467 HWVSVLRQLIHLGLVTQNI-------AMHSALQLTEA-ARPVLRGEASLMLAVPRLVTVK 518
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
S S Q N KL++ LR LR + E
Sbjct: 519 TRSSS-------------------------QKSYGGNYDRKLFAKLRKLRKAIADE--NN 551
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
V Y +F +A+L +++++P T E+L +NG+G+ K+ ++G + I +
Sbjct: 552 VPPYVVFNDASLIEMAEQMPITASEMLGVNGVGQKKLERFGKPFMVMIRDHV 603
>gi|428781470|ref|YP_007173256.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
gi|428695749|gb|AFZ51899.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
Length = 713
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 215/663 (32%), Positives = 350/663 (52%), Gaps = 86/663 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE + K+ FG FRP Q+++I A + DV V+MPTGGGKSL YQLPAL+ PG+ +V+S
Sbjct: 6 LETSLKQYFGYDQFRPGQKDVIQAVCNQQDVLVVMPTGGGKSLCYQLPALLKPGLAVVVS 65
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L + I ATFL+ ++ E + R L+ KLLY+ PEK+ S
Sbjct: 66 PLIALMQDQVESLQKNGIAATFLNSSLNPNEARS--RRLSILQGNIKLLYLAPEKLVSSG 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ L++++ ++ L+ +DEAHC+S+WGHDFRP+Y+ L L+Q+FP P +ALTATAT
Sbjct: 124 A-KKFLQAVSEKQGLSLFAVDEAHCISEWGHDFRPEYRQLETLRQQFPEVPTIALTATAT 182
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE------- 613
V+ D+++ L L I SF+RPNL+ + + + Y F
Sbjct: 183 EQVRGDIIRQLKLKPPKIQITSFDRPNLYYEVQPKQRQ-----HYNQLFKFIRHQNGSGI 237
Query: 614 FYVVSLECGHKAAF-----------YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y +S + AF YH + R Q ++ +D++ ++ AT+AFGMGI
Sbjct: 238 VYCLSRRRVEEVAFRLEKDGISALPYHAGMTDGNRRDYQTRFLRDDVQVMVATIAFGMGI 297
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
+KPD+RFV H+ LP+++E Y+QE GRAGRD + + C+L + D ++++ISQ E+S
Sbjct: 298 DKPDIRFVAHYDLPRNLENYYQEAGRAGRDNEPAQCLLLFGAKDIHTIEYLISQKEEEKS 357
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
+ L +M+ Y E DCRR +QL +FGE F + +C C
Sbjct: 358 Q-----------------RLARQQLRKMIDYAEG-TDCRRTIQLSYFGEHF-AGNC-GNC 397
Query: 783 DNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
DNC K +D T A+K + V ++F SHI+++ RGS N+ ++K+ H LS +
Sbjct: 398 DNCLNPKPI--EDWTVEAQKFLSCVARCRERFGMSHIIDILRGSKNKKIEKNGHHLLSTY 455
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK E + R L+ ++ + E +D Y VLK+NQ ++ ++ ++ V +
Sbjct: 456 GIGKEKTTEEWRNLARSLLHQNLITE---TTDGY----RVLKLNQ-RSWEILRHKRTVYI 507
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
+ + +S +++ D +Q +L LR R
Sbjct: 508 AVVKSASEKSVSSANL-----------------DIETQ-----------QLLVRLRKKRK 539
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
L + Y IF + TL+ +++ P ++ I+G+ + K+++YG + I++
Sbjct: 540 GLADM--QNTAPYMIFSDQTLKEMARLKPTQINKMTNISGVTEHKLNEYGQSFVSEIQAF 597
Query: 1023 IKE 1025
+ E
Sbjct: 598 LNE 600
>gi|359434605|ref|ZP_09224868.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20652]
gi|357918814|dbj|GAA61117.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20652]
Length = 607
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 227/665 (34%), Positives = 340/665 (51%), Gaps = 99/665 (14%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+K E K+VFG FR Q+ +I+A ++G D VL+PTGGGKS+ YQ+PAL+ G+T+
Sbjct: 12 VRKPETVLKQVFGYSEFRDGQKTVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTI 71
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ + KLLYV PEKV
Sbjct: 72 VISPLISLMQDQVTQLQALGVKAAYVNNSLAREEQQLVYQQLHQG--QIKLLYVAPEKVL 129
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ + L R L LN ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTA
Sbjct: 130 QREFLER-LSHLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTA 184
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE---- 613
TA + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 185 TADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKSQ 239
Query: 614 ---FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFG
Sbjct: 240 SGIIYCTSRKRVDDIAEKIADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFG 299
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+
Sbjct: 300 MGINKPNVRFVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDD 359
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
EQ RFN M S+ E CRR + L +F E + +
Sbjct: 360 EQRRRVE-EQRFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQR 396
Query: 780 KTCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHR 835
+ C NC KSF D T A++ + V GQ+F +I+E+ RG+ ++ +
Sbjct: 397 EPCGNCDICLNPPKSF---DGTLVAQQALSCVYRAGQRFGLGYIVELLRGANTSRIRDNN 453
Query: 836 HETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLII 895
H LS +G GK + ILR L+ + L +++ +
Sbjct: 454 HHELSTYGIGKDKSSEFWLSILRQLIHQGLLSQDITQG---------------------- 491
Query: 896 GRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEV-DLNLSAKLY 954
S +L+++ KG + +L+ R Q+++ N KL+
Sbjct: 492 -------------ASLRLTEAARVILKGE-YALQLAEPRLQAKHVYQDKLAQFNYDKKLF 537
Query: 955 SSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVR 1014
+ LR LR L + V Y +F + TL +++ +P + E L+++G+G K++KYG
Sbjct: 538 ARLRALRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGA 595
Query: 1015 LLETI 1019
L I
Sbjct: 596 FLTAI 600
>gi|315127615|ref|YP_004069618.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
gi|315016129|gb|ADT69467.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
Length = 607
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/669 (34%), Positives = 337/669 (50%), Gaps = 107/669 (15%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+K E K+VFG FR Q +I+A ++G D VL+PTGGGKS+ YQ+PAL+ G+T+
Sbjct: 12 VRKPETVLKQVFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTI 71
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ K LLYV PEKV
Sbjct: 72 VISPLISLMQDQVTQLQALGVKAAYVNNSLAREEQQLVYQQLHQGLIK--LLYVAPEKVL 129
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ D L R L LN ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTA
Sbjct: 130 QRDFLER-LSHLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTA 184
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE---- 613
TA + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 185 TADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKNQ 239
Query: 614 ---FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFG
Sbjct: 240 SGIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFG 299
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+
Sbjct: 300 MGINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDD 359
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
EQ RFN M S+ E CRR + L +F E + +
Sbjct: 360 EQRRRVE-EQRFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQR 396
Query: 780 KTCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHR 835
+ C NC KSF D T A++ + V QQF +I+E+ RG+ ++ +
Sbjct: 397 EPCGNCDICLNPPKSF---DGTLVAQQALSCVYRAQQQFGLGYIVELLRGANTSRIRDNN 453
Query: 836 HETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLII 895
H LS +G GK + ILR L+ + L +++
Sbjct: 454 HHELSTYGIGKDKSSEFWLSILRQLIHQGLLSQDIT------------------------ 489
Query: 896 GRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSG----KLSPSRNDTPSQPQNEV-DLNLS 950
Q LR +T A ++L G +L+ R Q+++ N
Sbjct: 490 --QGASLR--------------LTEAARAILKGEYALQLAEPRLQAKHVYQDKLAQFNYD 533
Query: 951 AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
KL++ LR LR L + V Y +F + TL +++ +P + E L+++G+G K++K
Sbjct: 534 KKLFARLRALRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNK 591
Query: 1011 YGVRLLETI 1019
YG L I
Sbjct: 592 YGGEFLTAI 600
>gi|108864717|gb|ABA95535.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 766
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 198/450 (44%), Positives = 253/450 (56%), Gaps = 51/450 (11%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS F W + + VFG S+R NQREIINA MSG DV V+M GGGKSL YQLPA
Sbjct: 67 WSG-SFLWDSRADDVRFNVFGISSYRQNQREIINAIMSGRDVLVIMAAGGGKSLCYQLPA 125
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
++ GITLV+SPL+SLIQDQ+M L I A L+ ++ + + L+ + K+L
Sbjct: 126 VLHDGITLVVSPLLSLIQDQVMGLAALGIQAYMLASTTNKEVEKFVYKALDKGEGELKIL 185
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPEK++KS + +LE + L+ I IDEAHC SQWGHDFRPDY+ LGILK +FP+
Sbjct: 186 YVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKVQFPS 245
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL------ 603
P++ALTATAT V+ D+++ L + C+ F + NRPNL+ KV E+ VG
Sbjct: 246 VPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLFY---KVFEKSPVGKVVIDEI 302
Query: 604 ------SYG-------HFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKD 647
SY + F KE V+ E G A +YH +D R V +WSK
Sbjct: 303 ANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYHADMDVISREKVHMRWSKS 362
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LYY D
Sbjct: 363 KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYRPGDV 422
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
R M+ N G +NL +V YC++ CRR
Sbjct: 423 PRQSSMVF-----------------YENCG------LQNLYDIVRYCQSKRSCRRGAFFR 459
Query: 768 HFGEKFDSAHCKKTCDNCSKIKSFIEKDVT 797
HFGE + C CDNC+ E D T
Sbjct: 460 HFGEA--AQDCNGMCDNCTSSLELKEIDAT 487
>gi|375267036|ref|YP_005024479.1| ATP-dependent DNA helicase RecQ [Vibrio sp. EJY3]
gi|369842356|gb|AEX23500.1| ATP-dependent DNA helicase RecQ [Vibrio sp. EJY3]
Length = 611
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 219/653 (33%), Positives = 345/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+E+I+A + G D V+MPTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQKFRDGQQEVIDAAIDGQDSLVIMPTGGGKSLCYQIPALVRNGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ M E + +++ + KL+YV+PE+V D + R LE
Sbjct: 83 DQVDQLKANGVAAECVNSTMSREELLSVYNRMHNG--QLKLIYVSPERVLMRDFIER-LE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
SL LA I +DEAHC+SQWGHDFRP+Y LG LKQ F + P +ALTATA + + D+
Sbjct: 140 SLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQHFSHVPFMALTATADDATRRDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
++ L L + ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 196 LERLRLNDPQVYLGSFDRPNIRYNLVEKHKPVSQIIRYLETQKGNCGIIYCGSRKKVEMV 255
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 256 TEKLCNNHIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 315
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ + +D ++ M+ +
Sbjct: 316 IPRNIESYYQETGRAGRDGLPAEAMMLFDPADISWLRRMLDE-----------------K 358
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + + L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 359 DDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S +G G+ +
Sbjct: 413 F---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYGIGRDHSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 470 DYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVALELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD +K N KL++ LR LR + E +
Sbjct: 522 ARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE--D 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 555 GLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|254425231|ref|ZP_05038949.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
gi|196192720|gb|EDX87684.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
Length = 738
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 232/693 (33%), Positives = 361/693 (52%), Gaps = 94/693 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE+ K FG+ FR QR I+ + DV V+MPTGGGKSL YQLPAL+ PG T+VIS
Sbjct: 8 LESALKHFFGHDQFRFEQRSIVEQVLKNKDVLVIMPTGGGKSLCYQLPALLRPGTTIVIS 67
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ++ L I ATFL+ + + E + R+ + K K+LY+ PE++ S
Sbjct: 68 PLIALMQDQVVALKDNGIEATFLNSTLSFEEVRS--RQKDLLMGKIKILYIAPERLFTSS 125
Query: 501 V--LLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
L+QL + + ++ IDEAHCVS+WGHDFRP+Y+ L +KQ +P P++ALTAT
Sbjct: 126 FHDFLKQL---SQKVGISTFAIDEAHCVSEWGHDFRPEYRQLFQIKQLYPQIPIIALTAT 182
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------------EKVAERLQVGLSYG 606
AT V+ D+VQ L L + ++ SFNR NL+ + K+ + G
Sbjct: 183 ATQRVRTDIVQQLRLNDPTVYISSFNRQNLYYEVIQKSRKPYQQLLAKIQQHQGKEKGAG 242
Query: 607 HFFLLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMG 661
+ L +V + + G A YH + QR Q ++ +D++ II ATVAFGMG
Sbjct: 243 IIYCLSRKHVDEVSNNLTKDGISALPYHAGLTNTQRENNQTKFIRDDVQIIVATVAFGMG 302
Query: 662 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQ 721
INKPDVRFVIH+ LP+++E Y+QE GRAGRD + +SC + + + D V+++I Q
Sbjct: 303 INKPDVRFVIHYDLPRNLESYYQESGRAGRDSEAASCTILFGWGDVHTVRYLIGQKA--- 359
Query: 722 SPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKT 781
PG R + L +++SY E+ + CRR +QL +FGE+F C
Sbjct: 360 ---DPGEQRI-----------AQQQLNQIISYAESPI-CRRQVQLNYFGEQFIPP-C-NN 402
Query: 782 CDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
CDNC + +D T A+K + V Q+F +HI++V RGS + + + H+ L+
Sbjct: 403 CDNC--LSPVPIEDWTIEAQKFLSCVYRCDQRFGMNHIVDVLRGSNKKRIFELGHDRLTT 460
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+ GK E + R ++ + +L E +D Y + K NQ I ++ V
Sbjct: 461 YSIGKERTADEWRMLCRAMIYQGYLEE---TTDGYPILRLTRKSNQ-------ILKKFVS 510
Query: 902 LRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLR 961
++ P +++ P S+ S NE ++L +R L+
Sbjct: 511 VKIP-------VTQKIAQPIA----------SKEKVTSTELNEESVSL-------MRQLK 546
Query: 962 TLLVKEAG-EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI- 1019
TL + A + V Y +F +++L+ +++ P+T ++ +I+G+G K+ +YG + I
Sbjct: 547 TLRKELADQQNVPPYVVFSDSSLRQMAQLRPQTADDFSKISGVGSRKLIQYGKIFTQAIR 606
Query: 1020 ------------ESTIKEFYKTDKNGSSSNDSN 1040
ES KE DK S S+ S+
Sbjct: 607 KFCSDHNLEVSTESFSKEPTVVDKGSSKSDISS 639
>gi|316936302|ref|YP_004111284.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris DX-1]
gi|315604016|gb|ADU46551.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris DX-1]
Length = 617
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 223/646 (34%), Positives = 333/646 (51%), Gaps = 71/646 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q I+ G D VLMPTGGGKSL YQLPAL+ G +V+SPL++L++
Sbjct: 24 VFGLSSFRGQQEAIVRHVADGGDALVLMPTGGGKSLCYQLPALLRDGCGVVVSPLIALMR 83
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL++ + A L+ + + E I ++L + LLYV PE++ L
Sbjct: 84 DQVAGLLESGVRAAALNSTLSYDEASAIEQQLLKG--ELDLLYVAPERLLTPRCL----- 136
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L AR +A IDEAHCVSQWGHDFRP+Y GL + +KFPN P +ALTATA A + ++
Sbjct: 137 GLLARAKIALFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPNVPRIALTATADALTRREI 196
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGH------FFLLKEFYVVS 618
+ L L + F SF+RPN+ +D + +L+ + H + L V
Sbjct: 197 AERLALTDAPCFVSSFDRPNIRYSIVDKQNAPAQLKAFIDDRHRGHSGVVYCLSRAKVED 256
Query: 619 L-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ + G A YH + P RA Q ++ ++ +I AT+AFGMGI+KPDVRFV H
Sbjct: 257 IAETLSKSGLTALPYHAGLPPDARARNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHL 316
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S + Y SD ++ + MI + + G + F
Sbjct: 317 DLPKSIEAYYQETGRAGRDGKPSEAWMAYGLSDIVQQRRMIDE--------SSGSDAFKR 368
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+ G+ L +V CE+ CRR L +FGE C CDNC I
Sbjct: 369 VSMGK--------LDALVGLCES-TGCRRTRLLGYFGETAQHESC-GNCDNCLTPPKVI- 417
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D T A+KL+ TGQ+F + H+++V G L + V + H+ LS+ G G + +
Sbjct: 418 -DGTVPAQKLLSCAYRTGQRFGAQHLIDVLLGRLTERVGQFGHDRLSVFGIGGEFNEKQW 476
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
++R LV L + S+ +G+ LK+ ++ + ++ G V+LR
Sbjct: 477 RAVIRQLVSLGHLAPD---SEAFGA----LKLTET-SRAVLKGEAQVMLR---------- 518
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
++ P + G++ + +T P+ L+++L+ R+ + K GV
Sbjct: 519 EQTGGRPPRARSRRGEVGAAPRETSGDPE----------LFAALKAWRSEVAK--ARGVP 566
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
AY + +AT+ ++ PRT +EL I GIG K+ YG LL +
Sbjct: 567 AYVVLHDATMDGIAAARPRTLDELRGIPGIGDKKLEIYGAALLALM 612
>gi|239813172|ref|YP_002942082.1| ATP-dependent DNA helicase RecQ [Variovorax paradoxus S110]
gi|239799749|gb|ACS16816.1| ATP-dependent DNA helicase RecQ [Variovorax paradoxus S110]
Length = 633
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 225/652 (34%), Positives = 338/652 (51%), Gaps = 70/652 (10%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPL 442
+VFG FR Q++I+ ++G D VLMPTGGGKSL YQ+PA+ G+++V+SPL
Sbjct: 24 EVFGYSQFRGPQQDIVEHVVAGGDALVLMPTGGGKSLCYQIPAIARQRAGRGVSVVVSPL 83
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
++L+ DQ+ L +A + A FL+ ++W + Q++ R + + LLY PE+V +
Sbjct: 84 IALMHDQVGALHEAGVNAAFLNSTLDWEQTQDVERRMLRG--EITLLYAAPERV-NTPRF 140
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL+SL R L+ IDEAHCVSQWGHDFRP+Y+ L +L +++P P +ALTATA A
Sbjct: 141 LSQLDSLKERGKLSLFAIDEAHCVSQWGHDFRPEYRALTVLHERYPGVPRIALTATADAL 200
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV------------GLSYGHFF 609
+ D+V+ L L F SF+RPN+ + EK Q+ G+ Y
Sbjct: 201 TRADIVERLQLEEARQFVSSFDRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSR 260
Query: 610 LLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E V L+ G A YH +D A R Q ++ ++E ++ AT+AFGMGI+KPDVR
Sbjct: 261 KRVEDVAVMLKGAGINALPYHAGLDAAVRQKHQDRFLREEGVVMVATIAFGMGIDKPDVR 320
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV H +PK+IEGY+QE GRAGRDG + + Y D + + MI + +P
Sbjct: 321 FVGHLDMPKNIEGYYQETGRAGRDGAPADAWMAYGLQDVVNQRRMIDE--------SPAG 372
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
F +V+ + LL + DCRR+ L +FGEK S C CDNC
Sbjct: 373 EEFK-----QVMRGKLDALLSLAEAS----DCRRVRLLGYFGEK--STPC-GNCDNCLNP 420
Query: 789 KSFIEKDVTDTAKKLVELV----KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
D TD A+KL+ + +L+G F + HI+++ RG + VK+ HE +S G
Sbjct: 421 PQVW--DGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGKETEKVKQFGHERISTFGI 478
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G ++ + +LR L+ L V + LK+ + + ++ G NV LR
Sbjct: 479 GAEFSEVQLRGVLRQLIATGALA-------VDAEAFNTLKLTEG-SRAVLKGEANVTLRE 530
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
+ + + K P + G SP+ + Q K + +L+ R +
Sbjct: 531 SVSSPAARGGK----PRREKAARGAPSPAAAALDADGQ---------KRFEALKAWRAEV 577
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
+E + AY IF +ATL +++R P T E+L I+GIG K+ YG +L
Sbjct: 578 ARE--HNLPAYVIFHDATLAAIAERAPATLEDLQGISGIGTKKLEAYGAEVL 627
>gi|238786204|ref|ZP_04630153.1| ATP-dependent DNA helicase recQ [Yersinia bercovieri ATCC 43970]
gi|238712894|gb|EEQ04957.1| ATP-dependent DNA helicase recQ [Yersinia bercovieri ATCC 43970]
Length = 610
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 220/654 (33%), Positives = 341/654 (52%), Gaps = 82/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+EIINAT+ G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQEIINATLEGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ + +Q ++ S + KLLY+ PE++ + L Q
Sbjct: 78 MKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSG--QIKLLYIAPERLVM-ESFLDQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA + +
Sbjct: 135 LHQWRP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPHLPVIALTATADEATRG 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L +I SF+RPN LW + +R + G+ Y +
Sbjct: 191 DIVRLLNLHQPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNSRAK 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDTTARLQSRGLSVAAYHAGLDNERRAHVQEAFQRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + VL Y +D ++ + E+ P
Sbjct: 309 VHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G + L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 -----AGAQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-----KQQSCGNCDICLD 405
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D A+K + V GQ+F +I+EV RG+ NQ +++ H+ LS++G G+ +
Sbjct: 406 PPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREFGHDKLSVYGLGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+LR LV L + + + S L++ ++ A ++ + L P I
Sbjct: 466 HEHWVSVLRQLVHLGLLSQNIAQ-------FSALQLTEA-ARPVLRAELPLQLAVPR-IQ 516
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
S K+ S + G N KL++ LR LR + E
Sbjct: 517 SLKVRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIADEG- 552
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F + TL +++++P T ELL + G+G+ K+ ++G + I +
Sbjct: 553 -NIPPYVVFNDTTLLEMAEQMPITASELLSVTGVGQRKLERFGAPFMAMIRDHV 605
>gi|293393904|ref|ZP_06638211.1| ATP-dependent helicase RecQ [Serratia odorifera DSM 4582]
gi|291423731|gb|EFE96953.1| ATP-dependent helicase RecQ [Serratia odorifera DSM 4582]
Length = 614
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 338/650 (52%), Gaps = 82/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA ++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 22 RDTFGYQQFRPGQQTIINAAINGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A + +Q E++ KLLY+ PE++ D L
Sbjct: 82 MKDQVDQLLAYGVSAACYNSTQTREQQLEVMAGCRRG--DVKLLYIAPERLMM-DSFLDL 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP PV+ALTATA + +
Sbjct: 139 LDHCQP----ALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPTMPVIALTATADEATRG 194
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+ + L L + ++ SF+RPN LW + +R + G+ Y +
Sbjct: 195 DITRLLALHDPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNSRAK 252
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 253 VEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFV 312
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 313 VHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EEKP------- 360
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G+ L+ L M ++ E CRRL+ L +FGE A C NC
Sbjct: 361 -----AGQQLDIERHKLNAMSAFAEAQT-CRRLVLLNYFGEGKQQA-----CGNCDICLD 409
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D + A+K + + GQ+F +++EV RGS NQ +++ H+ L ++G G+
Sbjct: 410 PPKRYDGLEDARKALSAIGRVGQRFGIGYVVEVLRGSNNQRIREFGHDKLPVYGIGRDHT 469
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ +LR L+ F+ + + ++ S L++ ++ A ++ G + L P I
Sbjct: 470 TEHWTSVLRQLIHLGFITQNI-------ALHSALQLTEA-ARPVLRGEVPLQLAVPR-IQ 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
S K P G Q N KL++ LR LR + E
Sbjct: 521 SLK-------PRSGG----------------SQKTYGGNYDRKLFAKLRKLRKSIADE-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E + Y +F + TL +++++P ELL +NG+G+ K+ ++G + I
Sbjct: 556 ENIPPYVVFNDTTLLEMAEQMPTKASELLSVNGVGQRKLERFGSPFMAMI 605
>gi|86148265|ref|ZP_01066561.1| ATP-dependent DNA helicase RecQ [Vibrio sp. MED222]
gi|85833961|gb|EAQ52123.1| ATP-dependent DNA helicase RecQ [Vibrio sp. MED222]
Length = 612
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 221/656 (33%), Positives = 345/656 (52%), Gaps = 87/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q+E+I+ + G D V+MPTGGGKSL YQ+PAL+ G+TLVISPL+SL
Sbjct: 22 QDVFGYQSFRDGQQEVIDLAVEGKDSLVIMPTGGGKSLCYQIPALVRDGLTLVISPLISL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ +M + + +NS + K++Y +PE+V D + R
Sbjct: 82 MKDQVDQLKANGVAAECINSSMPRDQLLSVFNRMNSG--QLKMVYASPERVLMRDFIER- 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ FP+ P +ALTATA + ++
Sbjct: 139 LQGLP----LSMIAVDEAHCISQWGHDFRPEYALLGQLKQYFPHVPYMALTATADDATRK 194
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKE 613
D++ L LV + SF+RPN+ + +V L+ G+ Y E
Sbjct: 195 DIISRLQLVEPHTYLGSFDRPNIRYNLVEKHKPVSQVVRYLETQKGNCGIIYCGSRKKVE 254
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
L C G +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+
Sbjct: 255 MVTEKL-CNNGIRAAGYHAGMDTDERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVV 313
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H +P++IE Y+QE GRAGRDG + ++ + +D ++ M+ + E+ P
Sbjct: 314 HFDIPRNIESYYQETGRAGRDGLPAEAMMLFDPADMGWLRRMLDE--KEEGPQK------ 365
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI--- 788
+ L M ++ E CRR + L +FGE + +K C NC
Sbjct: 366 ---------QVEMHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKQCGNCDICLDP 410
Query: 789 -KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K F D T A+K + V Q F +++EV RG N V+ + H+ LS +G G+
Sbjct: 411 PKHF---DATQEAQKALSCVYRVNQSFGMGYVVEVMRGMQNIRVRDNGHDKLSTYGIGRD 467
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ I R L+ + L + + + +S L++ + +A L+ G ++ L P
Sbjct: 468 HSHDYWISIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGEMSLELAVPRL 519
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ + +KSD +K N KL++ LR LR + E
Sbjct: 520 DTAVRNAKSDKLSSK-------------------------NYDKKLFAKLRKLRKSIADE 554
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL +++ +P + E+L +NG+G+ K+ KY L+ I+ I
Sbjct: 555 --DGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLDKYADPFLDLIQEHI 608
>gi|27375353|ref|NP_766882.1| ATP-dependent DNA helicase [Bradyrhizobium japonicum USDA 110]
gi|27348489|dbj|BAC45507.1| ATP-dependent DNA helicase [Bradyrhizobium japonicum USDA 110]
Length = 670
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 339/648 (52%), Gaps = 66/648 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q EII G + VLMPTGGGKSL YQLP+L+ G +V+SPL++L++
Sbjct: 74 VFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLIALMR 133
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL+A + A L+ ++ E +I R L + LLYV PE++ LL
Sbjct: 134 DQVAGLLEAGVNAAALNSSLTPQEASDIERRLIAG--DLDLLYVAPERLVTPRCLL---- 187
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+ A+ +A IDEAHCVSQWGHDFRP+Y GL I+ ++FP P +ALTATA ++++
Sbjct: 188 -MLAQAKVALFAIDEAHCVSQWGHDFRPEYVGLSIIAERFPEVPRIALTATADELTRKEI 246
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVSL----- 619
V+ L L F SF+RPN+ +D +L+ + H Y +S
Sbjct: 247 VERLKLGGSPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERHAGDAGVVYCLSRNRVEE 306
Query: 620 ------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G A YH +D + R+ Q ++ ++ +I AT+AFGMGI+KPDVRFV H
Sbjct: 307 VAAALDDAGIAALPYHAGLDSSVRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHL 366
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S+ + Y SD ++ + MI + + G + F
Sbjct: 367 DLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDE--------SSGSDDFKR 418
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+ G+ L +V E CRR L +FGE C CDNC
Sbjct: 419 VSIGK--------LDALVGLAET-AQCRRRRLLAYFGEIVHGETC-GNCDNCLTPPKM-- 466
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
+D A+KL+ V TGQ+F + H+++V G L + V + H+ LS+ G G+ L + +
Sbjct: 467 RDGKVLAQKLLSCVYRTGQRFGAMHLIDVLIGRLTEKVTQFGHDKLSVFGIGRELNEKQW 526
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+LR LV L + S+ YG+ LK+ ++ A ++ G V LR + T++
Sbjct: 527 RTVLRQLVAMGHLQSD---SEAYGA----LKLTEA-ARGVLRGETEVWLR--EEVPGTRV 576
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
S +G L+P+ S PQ +VD L A+ LR R+ + +E GV
Sbjct: 577 RSSRAKSRRGD-----LAPA----ASAPQGDVDPELRAR----LRSWRSDVARE--RGVP 621
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
AY + +AT+ + + P T +EL + GIG K+ YG LL+ + +
Sbjct: 622 AYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVRT 669
>gi|399215939|emb|CCF72627.1| unnamed protein product [Babesia microti strain RI]
Length = 706
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 183/429 (42%), Positives = 251/429 (58%), Gaps = 47/429 (10%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
DF W+ +++ N +VF N FRP Q EIIN+ +SG+D F L+PTGGGK+L YQLPA+
Sbjct: 158 DFDWSNEIKRINSEVFNNTGFRPMQLEIINSVISGNDTFALVPTGGGKTLCYQLPAIYSD 217
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
GITLVISPL+SLIQDQ+ L NI E+ E+ I+ +L + + K+L+VTP
Sbjct: 218 GITLVISPLISLIQDQVQRLEFLNISCASFPTEQEYFERLSIIEKLRN--AEIKVLFVTP 275
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
EK+ S L+ L ++ELL R VIDEAHC+S WG DFRPDY LG+L++ +P+ P+L
Sbjct: 276 EKIVSSKWFQSVLDELYSKELLVRFVIDEAHCISHWGSDFRPDYASLGVLRKCYPDVPIL 335
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERLQVGL---- 603
LTATAT++V +D+++ + L NC F +FNRPNL K+A +G
Sbjct: 336 LLTATATSNVFDDLIRIMRLRNCQAFSCNFNRPNLKFKVVPKSRNTKLAIEELIGYVREY 395
Query: 604 --SYGHFFLLK----EFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATV 656
S G + L EF L + G + YH +D R VQ+ W + IN++ AT+
Sbjct: 396 PTSSGIVYCLSCQDCEFVSSELVKSGINSMHYHAQLDQLTRKHVQQSWMEGSINVVVATL 455
Query: 657 AFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQ 716
AFGMGI+K +VRFVIH S+PKSIE Y QE GRAGRDG+ ++C++ Y Y D R+ ++
Sbjct: 456 AFGMGIDKSNVRFVIHFSMPKSIENYFQEAGRAGRDGELATCIVMYDYKDSQRLLSLVKN 515
Query: 717 GVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSA 776
G E++ +M+ YCEN CRR + L HFG+K
Sbjct: 516 G---------------------------ESIKKMLEYCENPKKCRREMLLGHFGQKLKGP 548
Query: 777 HCKKTCDNC 785
C CDNC
Sbjct: 549 -CDVICDNC 556
>gi|242219722|ref|XP_002475637.1| predicted protein [Postia placenta Mad-698-R]
gi|220725158|gb|EED79158.1| predicted protein [Postia placenta Mad-698-R]
Length = 457
Score = 343 bits (879), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 191/467 (40%), Positives = 260/467 (55%), Gaps = 48/467 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-----PGITLVISPL 442
VFG FR NQ E I A + G DVF+LMPTGGGKSL YQLPA +C G+T+VISPL
Sbjct: 9 VFGLSGFRTNQLEAITAALDGKDVFLLMPTGGGKSLCYQLPA-VCSSGTTKGVTVVISPL 67
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
SL+ DQ+ L N+ + S + E E+ L S+ K LLY+TPEK+ SD L
Sbjct: 68 RSLMTDQVESLQAKNVDVVYFSSDQSRDESDEVQHRLRSNGQKPSLLYLTPEKIKHSDAL 127
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
R L L ++LAR V+DEAHC+S WG FR Y L L++ FP+ P++ALTATAT
Sbjct: 128 KRDLTDLYESKMLARFVVDEAHCISSWGRQFRDSYGALAYLRKTFPDVPIMALTATATGE 187
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE------FYV 616
K D++ LG+ C QSFNRPNL + E ++ +V +F + K Y
Sbjct: 188 AKNDIIAHLGIRGCTELTQSFNRPNL--NYEVRLKKKKVTDEIVNFIVTKHKNESGVIYC 245
Query: 617 VS-LEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
S ++C G KA YH +D R ++W + + II AT+A GMGI+K
Sbjct: 246 SSKVKCEEVAKNLRDKYGLKARHYHAGLDDRDRTVTMQEWKRGDFKIIVATIALGMGIDK 305
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS-P 723
+VRFVIH+++P S+EGY+QE GRAGRDG+ + C+LYYS SD H + + + E+S P
Sbjct: 306 GNVRFVIHYAMPSSLEGYYQETGRAGRDGKPADCILYYSGSD----AHPVWRRINEESIP 361
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
T E + R++ +C N+VDCRR L FGE FDSA C+K CD
Sbjct: 362 ETEK-------------EKQRDTFRRVIQFCVNNVDCRRRQVLGFFGEVFDSASCRKGCD 408
Query: 784 NCSKIKSFIEKDVTDTAKKLVELVKLT----GQQFSSSHILEVFRGS 826
NC +KD+ A ++ L K ++ + L+V RG+
Sbjct: 409 NCRDTTDIEKKDMRKAAVDIINLAKSMILKHKERITRIQFLDVIRGA 455
>gi|418054291|ref|ZP_12692347.1| ATP-dependent DNA helicase RecQ [Hyphomicrobium denitrificans 1NES1]
gi|353211916|gb|EHB77316.1| ATP-dependent DNA helicase RecQ [Hyphomicrobium denitrificans 1NES1]
Length = 728
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 229/671 (34%), Positives = 342/671 (50%), Gaps = 77/671 (11%)
Query: 383 ANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPL 442
A + VFG FRP Q +II+ + G D LMPTGGGKSL YQ+P+L+ PG +V+SPL
Sbjct: 25 AKLEDVFGYKGFRPLQGDIIDTILRGGDCLALMPTGGGKSLCYQIPSLVRPGTGIVVSPL 84
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
++L+QDQ+ L + A FL+ + + Q +I R+ +D LLYV PE++ + L
Sbjct: 85 IALMQDQVDALRDLGVKAAFLNSTQDRSTQDQIERQFAAD--ALDLLYVAPERLVQERTL 142
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
+L R +A IDEAHCVSQWGHDFRP+Y+ L IL Q+FP+ P +ALTATA
Sbjct: 143 -----ALFERADIALFAIDEAHCVSQWGHDFRPEYRQLKILAQRFPSVPRIALTATADER 197
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVA-----ERLQVGLSYGHFFLLKEFYVV 617
++D++ L L N F SF+RPN+ ++ ERL + H Y +
Sbjct: 198 TRQDIIAELSLENARSFIASFDRPNIRYTIAELGSGSARERLWQFIEAEHSSDAGIVYCL 257
Query: 618 SLEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
S + G KA YH ++ RA Q ++ +E II AT+AFGMGI+KPD
Sbjct: 258 SRKSVEETAAWLCSKGRKALAYHAGLEAPVRAAAQAKFLTEEGLIIVATIAFGMGIDKPD 317
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFV H +LPKSIE Y+QE GRAGRDG+ ++ + Y D ++++ I Q +
Sbjct: 318 VRFVAHLNLPKSIESYYQETGRAGRDGEAANAWMAYGLQDIVQLRQWIGQ--------SE 369
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
G F + L +V E CRR L +FGE S C CDNC
Sbjct: 370 GPEAFKT--------VQRQKLDALVGLAEMP-GCRRQALLAYFGE-MRSEPC-GNCDNC- 417
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
+ +D T A+K + V TGQ+F +++ +V G+ ++ V ++ H+ LS+ G GK
Sbjct: 418 -LSPPHTEDGTIIAQKALSAVYRTGQRFGVTYLADVLIGTADERVLRNGHDRLSVFGIGK 476
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ S + R L + +L D G S VL +A L+ G + ++R
Sbjct: 477 DVPVSTWKGLFRQLTAQGYL-----TGDDEGMGSLVLT---ERARPLLRGEERFLMRVTR 528
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
KS V +G+ L+ K+ +R + P L+ +L+ LR L
Sbjct: 529 -------PKSKVAKKRGASLASKV--TRENQP--------------LFDALKALRQKLA- 564
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
A + Y + + TL L+++ P TE L +I G+G +K+++YG ++ I K
Sbjct: 565 -AAAKLPPYVVAQDRTLIELAEKRPDTETALHDILGLGASKIARYGAAFMQVISQFKKHP 623
Query: 1027 YKTDKNGSSSN 1037
T++ +S N
Sbjct: 624 VLTNRLSASVN 634
>gi|398825380|ref|ZP_10583678.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. YR681]
gi|398223762|gb|EJN10096.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. YR681]
Length = 621
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 227/648 (35%), Positives = 338/648 (52%), Gaps = 66/648 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q EII G + VLMPTGGGKSL YQLP+L+ G +V+SPL++L++
Sbjct: 25 VFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLIALMR 84
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L++A + A L+ ++ + E +I R L + LLYV PE++ L
Sbjct: 85 DQVAGLIEAGVNAAALNSSLTFQEASDIERRLIAG--DLDLLYVAPERLVTPRCL----- 137
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
S+ A+ +A IDEAHCVSQWGHDFRP+Y GL I+ ++FP+ P +ALTATA ++++
Sbjct: 138 SMLAQAKVALFAIDEAHCVSQWGHDFRPEYVGLSIIAERFPDVPRIALTATADELTRKEI 197
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVSL----- 619
V+ L L F SF+RPN+ +D +L+ + H Y +S
Sbjct: 198 VERLQLTGSPQFVSSFDRPNIRYEIVDKRNAVSQLKDFIRERHAGDAGVVYCLSRNRVEE 257
Query: 620 ------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
E G A YH +D R+ Q ++ ++ +I AT+AFGMGI+KPDVRFV H
Sbjct: 258 VAAALDEAGIAALPYHAGLDSNVRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHL 317
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S+ + Y SD ++ + MI + + G + F
Sbjct: 318 DLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDE--------SSGSDDFK- 368
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+ L +V E CRR L +FGE C CDNC
Sbjct: 369 -------RVSIRKLDALVGLAET-AQCRRKRLLGYFGENAHGETC-GNCDNCLTPPKM-- 417
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
+D A+KL+ TGQ+F + H+++V G L + V + H+ LS+ G G+ L + +
Sbjct: 418 RDGKVLAQKLLSCAYRTGQRFGAMHLIDVLIGRLTEKVTQFGHDKLSVFGIGRELNEKQW 477
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+LR LV +L + S+ YG+ LK+ ++ A ++ G V LR + T++
Sbjct: 478 RTVLRQLVAMGYLQSD---SEAYGA----LKLTET-ARGVLRGETEVWLREEAP--GTRI 527
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
S +G L+P+ N PQ +VD L A+ LR R+ + +E GV
Sbjct: 528 RSSRAKSRRGD-----LAPAAN----APQGDVDPELRAR----LRSWRSDIARE--RGVP 572
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
AY + +AT+ + + P T +EL + GIG K+ YG LL+ + +
Sbjct: 573 AYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVRT 620
>gi|334706300|ref|ZP_08522166.1| ATP-dependent DNA helicase RecQ [Aeromonas caviae Ae398]
Length = 611
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 228/653 (34%), Positives = 342/653 (52%), Gaps = 87/653 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q EII ++G D VL PTGGGKSL YQ+PAL+ PG+ +V+SPL+SL
Sbjct: 21 QAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCYQIPALLRPGLGVVVSPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ + E + + + KL+YV+PE++ + + + R
Sbjct: 81 MKDQVDTLRANGVAAVYINSALSREEMIQNFAAMRRG--EIKLVYVSPERLLQHEFMDRL 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E L IDEAHCVSQWGHDFRP+Y LG LKQ FP PV+ALTATA + +
Sbjct: 139 AELP-----LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRS 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGLSYGHFFLLKE 613
D++ L L + I SF+RPN+ ++ K AE+L G+ Y E
Sbjct: 194 DMLHRLELNDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KAA YH + R Q+ + KD+I I+ ATVAFGMGI+KP+VRFV+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLELRQQTQEAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK+IE Y+QE GRAGRDG + +L Y +D RV+ ++ N
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD----------------N 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ N + L+ L M ++ E CRR + L +FGE D K C NC
Sbjct: 358 IENPQQ-LQVEQYKLNVMAAFAEAQT-CRRQVLLNYFGEYND-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
KS+ D T+ A+K + V GQ F +++EV RGSLNQ +K H H+ LS +G GK
Sbjct: 411 KSY---DGTEDAQKALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQ 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP--S 906
+ ++R L+ + L + + + + VL++ ++ A ++ G + L P
Sbjct: 468 SHEYWMSVIRQLIHKGLLTQNITR-------NLVLQLTEA-ARPVLRGEMKLELAVPRLQ 519
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I+S K ++ LL + N +L+ LR LR + +
Sbjct: 520 PISSRKEKRN-------GLLD------------------NANYDKRLFKELRALRKQIAE 554
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ E V Y +F +ATL +++ +P TEEE+L +NG+G K+ ++G ++ I
Sbjct: 555 D--EEVPPYVVFNDATLVEMAQLMPMTEEEMLAVNGVGHRKLERFGEAFMDLI 605
>gi|148826626|ref|YP_001291379.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
gi|148716786|gb|ABQ98996.1| prolyl-tRNA synthetase [Haemophilus influenzae PittEE]
Length = 615
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 224/651 (34%), Positives = 351/651 (53%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INAT++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A+R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RITESLRNKGVSAAAYHAGMETARRDRVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H+ LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIVVLRGMHNQKIIELQHDKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P +
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEELELAMPRISS 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G+ ++ I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGLPFIKLIQ 606
>gi|307566216|ref|ZP_07628664.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
gi|307345074|gb|EFN90463.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
Length = 727
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 349/662 (52%), Gaps = 89/662 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG +F+ Q II ++G+D+FVLMPTGGGKSL YQLP+LI G +V+SPL++L
Sbjct: 12 KHFFGFDNFKGEQESIILHLLAGNDIFVLMPTGGGKSLCYQLPSLIMEGTAIVVSPLIAL 71
Query: 446 IQDQI---MHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD-- 500
+++Q+ + + + A FL+ +++ E + ++ K KLLYV PE + K D
Sbjct: 72 MKNQVDVVNGISETDGVAHFLNSSLKKAEIDSVRNDIRVG--KTKLLYVAPESLNKEDNI 129
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L+ ++ ++ IDEAHC+S+WGHDFRP+Y+ + + P++ALTATAT
Sbjct: 130 AFLKTIK-------VSFYAIDEAHCISEWGHDFRPEYRKIRTAIDEIGKAPIIALTATAT 182
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWM---------DCEKVAERL--QVGLSYGHFF 609
V+ D+V++LG+ C+ F+ SFNRPNL+ D K R Q G +
Sbjct: 183 DKVRTDIVRSLGIEGCLEFKSSFNRPNLYYEVRFKKNEDDTNKQIIRFIKQHSGKSGIIY 242
Query: 610 LL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
L +E + + KAA YH +D R+ Q Q+ ++I++I AT+AFGMGI+K
Sbjct: 243 CLSRKKVEELAAILIANDIKAAAYHAGLDSETRSKTQDQFLMEDIDVIVATIAFGMGIDK 302
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV-KHMISQGVAEQSP 723
PDVRFVIH+ +PKS+EGY+QE GRAGRDG+ C+ +YS +D ++ K M + +AEQ
Sbjct: 303 PDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGICIAFYSRNDLKKLEKFMEGKPIAEQ-- 360
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+ GR L TE +Y E+ V CRR L L +FGE++ +C CD
Sbjct: 361 -----------DIGRQLLQETE------AYAESSV-CRRKLLLHYFGEEYPKDNC-GMCD 401
Query: 784 NCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHG 843
NC K+ IE D K +++ +K + F +I++ +G ++ H+HE L G
Sbjct: 402 NCRNPKTLIE--AKDPLKIVLQAIKELKENFRQEYIIDFVKGRATDDIRDHKHEKLLTFG 459
Query: 844 AGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
AG+++ + ++R +++ ++ + V ++YG +LK+ +K I ++ ++
Sbjct: 460 AGENINNKVWNPVIRQAILKGYIKKSV---ELYG----LLKIT-AKGEKFIKSPESFMI- 510
Query: 904 FPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
+L + ND S V L +L++ L+ LR
Sbjct: 511 ---------------------VLDAEFKEDVNDIDSYNGGSV---LDPELFTMLKGLRKT 546
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ + GV Y +F + +L+ ++ P E+EL I G+G K +YG + I
Sbjct: 547 VAHKF--GVPPYVVFQDVSLEQMAMMYPINEQELQNIQGVGAGKAKRYGEEFYKLIHKYC 604
Query: 1024 KE 1025
KE
Sbjct: 605 KE 606
>gi|410639269|ref|ZP_11349819.1| ATP-dependent DNA helicase RecQ [Glaciecola chathamensis S18K6]
gi|410648965|ref|ZP_11359360.1| ATP-dependent DNA helicase RecQ [Glaciecola agarilytica NO2]
gi|410131472|dbj|GAC07759.1| ATP-dependent DNA helicase RecQ [Glaciecola agarilytica NO2]
gi|410141191|dbj|GAC08006.1| ATP-dependent DNA helicase RecQ [Glaciecola chathamensis S18K6]
Length = 604
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 210/650 (32%), Positives = 344/650 (52%), Gaps = 82/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG +FR QRE+I + G DV VLMPTGGGKSL YQ+PAL+ G+T+VISPL++L
Sbjct: 19 KNVFGYDAFRDGQREVIEQILQGKDVLVLMPTGGGKSLCYQIPALVLDGLTIVISPLIAL 78
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+ + + A +++ N+ E + R + +YKL+YV PE++ + D + R
Sbjct: 79 MKDQVDALVASGVSAAYINSNLSNEEMLNVYRGMQDG--RYKLIYVAPERLMQFDFIQR- 135
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L SLN +A +DEAHCVS WGHDFR +Y+ LG +KQ+FP PV+ LTATA + +
Sbjct: 136 LHSLN----VALFAVDEAHCVSHWGHDFRKEYRQLGQIKQQFPGVPVVGLTATADITTRS 191
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-------WMDCEKVAERLQVGLSYGHFFL-----LKE 613
D++Q L L +F+ SF+RPN+ + ++V + ++ G + + +
Sbjct: 192 DILQQLALEQPFVFKGSFDRPNIRYNQLFKYKATDQVIQYVKQQDGSGIIYCNSRKKVDD 251
Query: 614 FYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ + G A YH ++ R +Q+ + +D ++II ATVAFGMGINK +VRFV+H
Sbjct: 252 LSIALAKQGINCAGYHAGLEGPIRDKIQRDFIQDNVDIIVATVAFGMGINKSNVRFVVHF 311
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LP+S+E Y+QE GRAGRDG + +L + D R++ I G
Sbjct: 312 DLPRSVEAYYQETGRAGRDGMPAEALLLFDEKDAARIRQWIGMG---------------- 355
Query: 734 ANSGRV-LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
N R+ +E + + + CRR + L +F E + + C CD C
Sbjct: 356 DNPARLDIELQKFAAMEAFAEAQT---CRRQVLLNYFSE-YSAEDC-GNCDICLDPPKRF 410
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ V +A+ ++ + GQ +S ++++V RG + + + H+ LS G GK + +
Sbjct: 411 DGKV--SAQMVLSCIYRLGQNVASQYVIDVLRGKKLKRIFEQGHDALSTFGIGKDKSDAH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS-AINST 911
I+ L+ + FL ++ + S+VLK+ + +A L+ G+ + L P I+S
Sbjct: 469 WHNIIYQLIHKGFLRIDITQ-------SAVLKLTE-EARGLLAGKLELALAVPRLTIDSG 520
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K SK ++N KL++ L+ LR + + E
Sbjct: 521 KKSKLK----------------------------EMNYDRKLFAKLKHLRKSIAQR--ED 550
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
V + +F +ATL ++ ++P+++ E LE+NG+G+ K+ +YG L I +
Sbjct: 551 VPPFVVFSDATLADMADKLPQSKVEFLEVNGVGQTKLDRYGSEFLAAIAA 600
>gi|170728871|ref|YP_001762897.1| ATP-dependent DNA helicase RecQ [Shewanella woodyi ATCC 51908]
gi|169814218|gb|ACA88802.1| ATP-dependent DNA helicase RecQ [Shewanella woodyi ATCC 51908]
Length = 608
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 221/656 (33%), Positives = 344/656 (52%), Gaps = 84/656 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L + + VFG +FR Q+E+I + SG+D V+MPTGGGKSL YQLPAL PG+TLV+S
Sbjct: 13 LSLSLQSVFGYRTFRDGQKEVIEQSCSGYDCLVIMPTGGGKSLCYQLPALQLPGLTLVVS 72
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL+SL++DQ+ L+Q + A +L+ + E IL++++S + KLLYV+PE++ +
Sbjct: 73 PLISLMKDQVDSLIQMGVSAAYLNSSQPREESARILQQMHSG--ELKLLYVSPERLLQGH 130
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ R L LN L+ IDEAHC+SQWGHDFRP+Y LG L++ FP+ P++ALTATA
Sbjct: 131 FIDR-LHELN----LSLFAIDEAHCISQWGHDFRPEYAALGKLREVFPHVPIMALTATAD 185
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSLE 620
+ ++D+ L + + SF+RPN+ VAE+L F + +
Sbjct: 186 QATRKDICDRLTITPYSLL-TSFDRPNIRY---TVAEKLNAANQLRQFVAAQNGNSGIIY 241
Query: 621 C----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
C GH A YH +RA VQ ++ KD+++I+ ATVAFGMGINK
Sbjct: 242 CSSRRRVDEVAERLRLQGHNAEAYHAGKTQEERADVQDRFLKDQLDIVVATVAFGMGINK 301
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
+VR+V+H+ +PKS+E Y+QE GRAGRDG S +L + +D RV+H+I Q
Sbjct: 302 SNVRYVVHYDIPKSVESYYQETGRAGRDGLESEALLLFDPADIGRVRHLIEQS------- 354
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
PG + + L M ++ E CRR + L +F E + C N
Sbjct: 355 EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES-----ALEPCGN 398
Query: 785 CSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHG 843
C +K + A+K++ + Q+F +H++EV RGS V + H+ LS G
Sbjct: 399 CDICLDPPKKYNGIQDAQKVLSCIYRLDQRFGINHLIEVLRGSKAATVLERGHDKLSTWG 458
Query: 844 AGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
GK + I+R ++ F +++ + S +K+N S A +++ G ++L
Sbjct: 459 IGKDKSHEYWLSIIRQIIHLGFASQDITR-------GSSVKLNPS-ARSVLKGEVELLLA 510
Query: 904 FPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
P ++ T +GS LN KL++ L+ LR
Sbjct: 511 EP------RMVLQSTTKRRGS-----------------STRAPLNYDRKLFARLKQLRRK 547
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
L +E V Y +F +ATL ++ +P + E+L +NG+G+ K++++G L+ I
Sbjct: 548 LAEEL--DVPPYLVFNDATLAEMAAILPTSPGEMLAVNGVGERKLTRFGDEFLDEI 601
>gi|182681205|ref|YP_001829365.1| ATP-dependent DNA helicase RecQ [Xylella fastidiosa M23]
gi|386084704|ref|YP_006000986.1| ATP-dependent DNA helicase RecQ [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|417559225|ref|ZP_12210177.1| Superfamily II DNA helicase [Xylella fastidiosa EB92.1]
gi|182631315|gb|ACB92091.1| ATP-dependent DNA helicase RecQ [Xylella fastidiosa M23]
gi|307579651|gb|ADN63620.1| ATP-dependent DNA helicase RecQ [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338178204|gb|EGO81197.1| Superfamily II DNA helicase [Xylella fastidiosa EB92.1]
Length = 600
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 228/648 (35%), Positives = 345/648 (53%), Gaps = 77/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+ II +GHD VLMPTGGGKSL YQ+PAL+ GI +VISPL++L
Sbjct: 12 QRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPALLRKGIGVVISPLIAL 71
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ T+ Q I L + LLY+ PE++ + L
Sbjct: 72 MQDQVETLRQLGVRAAYLNSTLDATQAQRIEHALVT--ADLDLLYIAPERLLTAHFL--- 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P+ P +ALTATA +
Sbjct: 127 --SLLERSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHVPRIALTATADPPTQR 184
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKE 613
++ + L L + F SF+RPN+ + +K R Q+ G+ Y K
Sbjct: 185 EIAERLDLSDAHHFISSFDRPNIRYTVVQKNNMRRQLQEFLSRHRNTAGIVYA-MSRRKT 243
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ + C G+ A YH + RA Q+ + ++E ++CAT+AFGMGINKPDVRFV
Sbjct: 244 EEIAAYLCTQGYNALPYHAGLPAETRAKHQRCFLREEGIVMCATIAFGMGINKPDVRFVA 303
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKS+EGY+QE GRAGRDG+ + + YS D + +K MI Q A ++ R
Sbjct: 304 HIDLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSEASEA-------RK 356
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
V + L ++ YCE+ + CRR L L FGE + + C CDNC +
Sbjct: 357 CVERA---------KLDHLLGYCES-MQCRRQLLLSSFGETYPNP-CGN-CDNC--LTPA 402
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T ++K + V TGQ+F H++++ RGS +Q + + H+ LS +G G+ + +
Sbjct: 403 TAWDATVLSQKALSCVYRTGQRFGVGHLIDILRGSKSQRILQLGHDQLSTYGIGRDVDER 462
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ R LV L EV ++ YG L++ S + ++ G + V++R I
Sbjct: 463 SWRSVFRQLVATHLL--EV-DNEGYGG----LRLTPS-SRPVLKGERQVMMRRDQFIRE- 513
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
D Q L L+++L LR L KE +
Sbjct: 514 -----------------------RDRTGQRHGLSVLPEDLGLFNALHRLRAQLAKE--QN 548
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V A+ IF ++TL+H++++ P L +INGIG K+++YG +L+E +
Sbjct: 549 VPAFVIFHDSTLRHIAEQRPTNINALSKINGIGSNKLTRYGHQLIELV 596
>gi|444428652|ref|ZP_21223965.1| ATP-dependent DNA helicase RecQ [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444238126|gb|ELU49752.1| ATP-dependent DNA helicase RecQ [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 611
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 220/654 (33%), Positives = 346/654 (52%), Gaps = 87/654 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY-KLLYVTPEKVAKSDVLLRQL 506
DQ+ L + A ++ M ++E+L N Y + KL+YV+PE+V D + R L
Sbjct: 83 DQVDQLKANGVAAECINSTMP---REELLSVYNRMYTGHIKLVYVSPERVLMRDFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
E+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D
Sbjct: 139 ENLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEF 614
+++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 195 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 VTEKLCNNHIRAAGYHAGMDADERAYVQESFQRDDIQIVVATVAFGMGINKPNVRFVVHF 314
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 315 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE----------------- 357
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 358 KDDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPK 411
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 412 HF---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 469 HDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDT 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +KSD +K N KL++ LR LR + E
Sbjct: 521 AARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE-- 553
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 554 DGLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|320157768|ref|YP_004190147.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus MO6-24/O]
gi|319933080|gb|ADV87944.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus MO6-24/O]
Length = 611
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 221/657 (33%), Positives = 344/657 (52%), Gaps = 85/657 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG +FR Q+ +I A + G D V+MPTGGGKSL YQ+PAL+ GITLVISPL+SL+
Sbjct: 22 QVFGYQTFREGQQSVIEAAVEGKDSLVIMPTGGGKSLCYQIPALVRSGITLVISPLISLM 81
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + A ++ + + +++ + KL+YV+PE+V D + R L
Sbjct: 82 KDQVDQLKANGVAAECVNSTLSRDALLSVYNRMHAG--QLKLVYVSPERVLMRDFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
E+L LA I +DEAHC+SQWGHDFRP+Y LG LK FP+ P +ALTATA + ++D
Sbjct: 139 ENLP----LAMIAVDEAHCISQWGHDFRPEYAALGQLKHHFPHVPFMALTATADDATRKD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMD-CEKVAERLQV-----------GLSYGHFFLLKEF 614
++ L L ++ SF+RPN+ D EK QV G+ Y E
Sbjct: 195 ILSRLHLNEPHVYLGSFDRPNIRYDLVEKHKPVSQVIRYLESQKGNCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 LTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHF 314
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 315 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADITWLRRMLDE----------------- 357
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ G + + L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 358 KDDGPQKQVESHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPK 411
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T+ A+K + V Q F +++EV RG N +++H H+ +S +G G+ +
Sbjct: 412 HF---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRIREHGHDKISTYGLGRDHS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 469 HDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDMTLELAVPRLDT 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +K+D KLS D KL++ LR LR + E
Sbjct: 521 AARSAKAD-----------KLSNKHYDK--------------KLFAKLRKLRKSIADE-- 553
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
E + Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I +
Sbjct: 554 EEIPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHITHY 610
>gi|417846212|ref|ZP_12492224.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21639]
gi|341953231|gb|EGT79743.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21639]
Length = 627
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 222/649 (34%), Positives = 345/649 (53%), Gaps = 77/649 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 29 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQVPALCFEGLTLVISPLISL 88
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ + +L S + KLLYV+PEKV + Q
Sbjct: 89 MKDQVDQLQANGIEADFLNSSQTLEQQQRVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 144
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + +A IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 145 LISYSKVSFIA---IDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADHATRQ 201
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 202 DILTHLNLENPHRYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 261
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRF+ H
Sbjct: 262 RIAESLRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFIAH 321
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P T
Sbjct: 322 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPET------- 369
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
S R +E ++ L + CRRL+ L +FGE H + C+NC
Sbjct: 370 ---SQRQIE---QHKLEAIGEFAESQTCRRLVLLNYFGE-----HRQTPCNNCDICLDPP 418
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+K D A+K++ + GQ F + +++ V RG NQ + + +H+ LS++G GK +K
Sbjct: 419 KKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHDKLSVYGIGKDKSKE 478
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V ++ L++ +S A ++ G + + L P +
Sbjct: 479 HWQSVIRQLIHLGFVKQ------VISELNPTLQLTES-AKAILKGEEPLELAMPRISAIS 531
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K++ + PQ + N L++ LR LR + + E
Sbjct: 532 KIAHN------------------------PQRQSVANYDKDLFARLRFLRKQIADK--EN 565
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 566 IPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 614
>gi|319790871|ref|YP_004152511.1| ATP-dependent DNA helicase recq [Variovorax paradoxus EPS]
gi|315593334|gb|ADU34400.1| ATP-dependent DNA helicase RecQ [Variovorax paradoxus EPS]
Length = 631
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 341/652 (52%), Gaps = 72/652 (11%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPL 442
+VFG FR Q++I++ + G D VLMPTGGGKSL YQ+PA+ G+ +V+SPL
Sbjct: 24 EVFGYSQFRGAQQDIVDHVVGGGDALVLMPTGGGKSLCYQIPAIARQRAGRGVAVVVSPL 83
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
++L+ DQ+ L +A + A FL+ ++W + Q++ R + + LLY PE+V +
Sbjct: 84 IALMHDQVGALHEAGVNAAFLNSTLDWEQTQDVERRMLRG--EITLLYAAPERV-NTPRF 140
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL+SL R L+ IDEAHCVSQWGHDFRP+Y+ L +L +++P P +ALTATA
Sbjct: 141 LSQLDSLKERGKLSLFAIDEAHCVSQWGHDFRPEYRALTVLHERYPGVPRIALTATADDL 200
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV------------GLSYGHFF 609
+ D+V+ L L F SF+RPN+ + EK Q+ G+ Y
Sbjct: 201 TRADIVERLQLEEARQFVSSFDRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSR 260
Query: 610 LLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E +L+ G A YH +D A R Q ++ ++E ++ AT+AFGMGI+KPDVR
Sbjct: 261 KRVEDLATTLQGAGINALPYHAGLDAAVRQKHQDRFLREEGIVMVATIAFGMGIDKPDVR 320
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV H +PK+IEGY+QE GRAGRDG + + Y +D + + MI + +P
Sbjct: 321 FVGHLDMPKNIEGYYQETGRAGRDGAPADAWMTYGLNDVVNQRRMIDE--------SPAG 372
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
F +V+ + LL + DCRR+ L +FGEK S C CDNC
Sbjct: 373 EEFK-----QVMRGKLDALLSLAEAS----DCRRVRLLGYFGEK--STPC-GNCDNCLNP 420
Query: 789 KSFIEKDVTDTAKKLVELV----KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
+ D TD A+KL+ + +L+G F + HI+++ RG + VK+ HE +S G
Sbjct: 421 PNVW--DGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGKETEKVKQFGHERISTFGL 478
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G ++ + +LR L+ L V + LK+ + + ++ G NV LR
Sbjct: 479 GAEFSEVQLRGVLRQLIATGALA-------VDAEAFNTLKLTEG-SRAVLKGEANVTLR- 529
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
+I+S K P + + G PS ++D + K + +L+ R +
Sbjct: 530 -ESISSPAERK----PRREKVAKG--------APSPAAAKLD-DTGKKRFEALKAWRAEV 575
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
KE + AY IF +ATL +++R P T E+L I+GIG K+ YG +L
Sbjct: 576 AKE--HNLPAYVIFHDATLASIAERAPATLEDLQGISGIGTKKLEAYGTEVL 625
>gi|410632528|ref|ZP_11343186.1| ATP-dependent DNA helicase RecQ [Glaciecola arctica BSs20135]
gi|410147954|dbj|GAC20053.1| ATP-dependent DNA helicase RecQ [Glaciecola arctica BSs20135]
Length = 728
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 228/649 (35%), Positives = 347/649 (53%), Gaps = 82/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG FR +Q II ++ + +MPTGGGKSL YQ+P + G+T+VISPL+SL
Sbjct: 10 KSVFGFDQFRESQEAIIGNVLNKQNTLAIMPTGGGKSLCYQIPGTVFNGLTIVISPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L + IPA L+ ++ ++ Q+ L + + KLL++ PE ++ +L
Sbjct: 70 MQDQVRQLNELAIPACVLNSSLSDSDYQDNLDSIKHQ--QIKLLFLAPETALQTSIL--- 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + ++ I IDEAHC+S+WGHDFRP+Y+ L L + FP +ALTATAT V+E
Sbjct: 125 --DLLSNCDVSCIAIDEAHCISEWGHDFRPEYRQLNRLIECFPRAVCIALTATATPRVRE 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWM----------DCEKVAERL--QVGLSYGHFFL-LK 612
D+ + L + + + SF+RPNL++ C+K E+ Q G+ Y +
Sbjct: 183 DIKRQLNINDSSEYISSFDRPNLFISVIPKDNPYQQCKKFVEQHPEQSGIIYCQSRKGVD 242
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E + G A YH + +R+ Q+++ +D++NII AT+AFGMGINKPDVR+V+H
Sbjct: 243 ELTAKLKQDGFSALPYHAGLSSIKRSDYQERFIRDDVNIIVATIAFGMGINKPDVRYVLH 302
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LPK+IEGY+Q+ GRAGRDG + C+L + Y D +++ I Q EQ
Sbjct: 303 YDLPKNIEGYYQQIGRAGRDGLDADCLLLFGYGDTGKIRFFIEQMSNEQEK--------R 354
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+AN +L +M++ E + DCRR L +FGEK +C CDNC+ +S
Sbjct: 355 LANV---------HLNQMLALAEAE-DCRRTPLLAYFGEKSAKENC-ANCDNCTN-ESKE 402
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D+T A+K + V TGQ+F SSHI++V RGS + V +++H LS + G K +
Sbjct: 403 KSDLTVPAQKFLSCVHRTGQRFGSSHIIDVLRGSSAEKVLQNQHNLLSTYNIGNEYNKKQ 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQN--VVLRFPSAINS 910
+ R L+ + L +E + YG LK+ Q KA +++ G+ +L+ P A S
Sbjct: 463 WMALARQLIQKGLLNQE----EQYGG----LKLTQ-KAGDVLKGKVPFFALLQQPVAA-S 512
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
SK+ P +L + L+ R L EA
Sbjct: 513 GHASKTLANPG----------------------------DQQLVAILKADRKRLADEA-- 542
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y IF + TL ++ P +EE LL I+G+G+AK+ KYG L I
Sbjct: 543 NLPPYAIFSDRTLNEMAYYFPHSEENLLRIHGVGQAKLDKYGEHYLMLI 591
>gi|387770728|ref|ZP_10126905.1| ATP-dependent DNA helicase RecQ [Pasteurella bettyae CCUG 2042]
gi|386903739|gb|EIJ68543.1| ATP-dependent DNA helicase RecQ [Pasteurella bettyae CCUG 2042]
Length = 630
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 235/661 (35%), Positives = 351/661 (53%), Gaps = 77/661 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q E+I A ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 27 RSVFGYQSFRKGQEEVIEAALTGRDSLVVMATGNGKSLCYQIPALCFEGLTLVISPLISL 86
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL I A FL+ + +QQ++ + S + KLLY++PEKV + Q
Sbjct: 87 MKDQVDQLLTNGISADFLNSTQSFEQQQKVQNKAISG--ELKLLYLSPEKVMTNSFF--Q 142
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL +A IDEAHC+SQWGHDFRP+Y LG LK FPN PV+ALTATA + ++
Sbjct: 143 FISLCNVSFIA---IDEAHCISQWGHDFRPEYTQLGGLKSCFPNAPVMALTATADRTTRQ 199
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++Q L L ++ SF+RPN+ + EK VA++ + G+ Y + E
Sbjct: 200 DILQNLHLNEPHLYVGSFDRPNIRYTLVEKFKPMDQLCNFVVAQKGKSGIVYCNSRSKVE 259
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+L+ G AA YH ++P QR VQ+ + +D I ++ AT+AFGMGINK +VRFV H
Sbjct: 260 RIAEALKKKGVSAAGYHAGMEPQQRDAVQQAFQRDNIQVVVATIAFGMGINKSNVRFVAH 319
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
L +SIE Y+QE GRAGRD + VL+Y +D+ + M+ + P P
Sbjct: 320 FDLSRSIEAYYQETGRAGRDDLPAEAVLFYEPADYAWLHKMLL-----EEPEGPQR---- 370
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
E L + + E+ CRRL+ L +FGE + +K C NC
Sbjct: 371 --------EIKQHKLEAIGEFAESQT-CRRLVLLNYFGE-----NRQKPCQNCDICLDPP 416
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+K D A+K++ + TGQ F + +++ V RG NQ +K+++H+ LS++G GK +K
Sbjct: 417 KKYDGLLDAQKILSTIYRTGQCFGTQYVIGVMRGLQNQKIKENQHDQLSVYGIGKDKSKE 476
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L I L++++ +G + S L++ +S A ++ G + L P
Sbjct: 477 YWQSVIRQL-IHLGLVQQILND--FG-MGSRLQLTES-ARPVLRGEVPLQLAMPRL---- 527
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
S VT A+ PQ + L++ LR LR + + E
Sbjct: 528 ----SSVTMAQ-----------------TPQKNAIIYYDKDLFARLRFLRKQIADK--EN 564
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDK 1031
+ Y +F +ATLQ ++ P T E+L+ING+G K+ +YG + I+ K K K
Sbjct: 565 IPPYIVFNDATLQEMALHKPTTRVEMLQINGVGATKLERYGQAFMAIIKEH-KSLAKVSK 623
Query: 1032 N 1032
N
Sbjct: 624 N 624
>gi|89074461|ref|ZP_01160938.1| putative ATP-dependent DNA helicase RecQ [Photobacterium sp. SKA34]
gi|89049749|gb|EAR55299.1| putative ATP-dependent DNA helicase RecQ [Photobacterium sp. SKA34]
Length = 616
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 221/653 (33%), Positives = 342/653 (52%), Gaps = 81/653 (12%)
Query: 382 EANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISP 441
E+ +++FG FR Q ++I+A D V+MPTGGGKSL YQ+PAL+ GITLVISP
Sbjct: 19 ESVLQEIFGYQQFRVGQLDVIDAVNRDEDCLVIMPTGGGKSLCYQIPALLKEGITLVISP 78
Query: 442 LVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDV 501
L+SL++DQ+ L + A +++ ME E + + KL+YV+PE+V D
Sbjct: 79 LISLMKDQVDQLKANGVAAAYINSTMERDEILSVFDAMKD--ATVKLVYVSPERVLTYDF 136
Query: 502 LLRQLESLNAREL-LARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ R R++ LA + +DEAHC+SQWGHDFRP+Y LG LKQ F N P++ALTATA
Sbjct: 137 IDR------LRDVPLAMVAVDEAHCISQWGHDFRPEYAALGRLKQSFENLPIMALTATAD 190
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPN----LWMDCEKVAE--------RLQVGLSYGHF 608
+ + D+V LGL + SF+RPN LW + + + R Q G+ Y +
Sbjct: 191 ETTRHDIVSRLGLQTPHEYLGSFDRPNIRYILWEKHKPLTQIIRYVEGMRGQCGIIYCNS 250
Query: 609 FLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L + G +A YH +D +RA VQ+ + +D+I+I+ ATVAFGMGINKP+V
Sbjct: 251 RKKVEQISEKLRDKGIRAEAYHAGLDHIERANVQEAFQRDDIHIVVATVAFGMGINKPNV 310
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
R+V+H +P++IE Y+QE GRAGRDG + V++Y SD ++ + +
Sbjct: 311 RYVVHFDIPRNIESYYQETGRAGRDGLPAEAVMFYDPSDLAWLRRCLDE----------- 359
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
G+ + L M ++ E CRR + L +FGE D A C NC
Sbjct: 360 ------KEEGQQKDVEHHKLHAMGAFAEAQT-CRRQVLLHYFGEHRDEA-----CGNCDV 407
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ + + A+K + V Q F ++I+EV RG NQ +++H H+ LS +G G+
Sbjct: 408 CLDPPQRFNAVEVAQKALSCVYRVNQSFGITYIVEVLRGMQNQRIREHGHDKLSTYGIGR 467
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +LR L+ +L + + + +SVL++ + KA L+ + L P
Sbjct: 468 EYSHEYWVSVLRQLIHLGYLTQNISR-------NSVLQLTE-KARPLLRAEIGLELAVPR 519
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
N + K + KL+ + D KL++ LR LR +
Sbjct: 520 LDNIARNMKVN-----------KLANRQYDK--------------KLFAKLRKLRKAIAD 554
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E E + Y +F +A+L +++R+P + + L +NG+G+ K+ KYG L I
Sbjct: 555 E--EDLPPYVVFNDASLMEMAERLPTSNGDFLAVNGVGQRKLEKYGEVFLGLI 605
>gi|71728516|gb|EAO30674.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Xylella fastidiosa Ann-1]
Length = 645
Score = 342 bits (877), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 228/648 (35%), Positives = 345/648 (53%), Gaps = 77/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+ II +GHD VLMPTGGGKSL YQ+PAL+ GI +VISPL++L
Sbjct: 57 QRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPALLRKGIGVVISPLIAL 116
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ T+ Q I L + LLY+ PE++ + L
Sbjct: 117 MQDQVETLRQLGVRAAYLNSTLDATQAQRIEHALVT--ADLDLLYIAPERLLTAHFL--- 171
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P+ P +ALTATA +
Sbjct: 172 --SLLERSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHVPRIALTATADPPTQR 229
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKE 613
++ + L L + F SF+RPN+ + +K R Q+ G+ Y K
Sbjct: 230 EIAERLDLSDAHHFISSFDRPNIRYTVVQKNNMRRQLQEFLSRHRNTAGIVYA-MSRRKT 288
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ + C G+ A YH + RA Q+ + ++E ++CAT+AFGMGINKPDVRFV
Sbjct: 289 EEIAAYLCTQGYNALPYHAGLPAETRAKHQRCFLREEGIVMCATIAFGMGINKPDVRFVA 348
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKS+EGY+QE GRAGRDG+ + + YS D + +K MI Q A ++ R
Sbjct: 349 HIDLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSEASEA-------RK 401
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
V + L ++ YCE+ + CRR L L FGE + + C CDNC +
Sbjct: 402 CVERA---------KLDHLLGYCES-MQCRRQLLLSSFGETYPNP-CGN-CDNC--LTPA 447
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T ++K + V TGQ+F H++++ RGS +Q + + H+ LS +G G+ + +
Sbjct: 448 TAWDATVLSQKALSCVYRTGQRFGVGHLIDILRGSKSQRILQLGHDQLSTYGIGRDVDER 507
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ R LV L EV ++ YG L++ S + ++ G + V++R I
Sbjct: 508 SWRSVFRQLVATHLL--EV-DNEGYGG----LRLTPS-SRPVLKGERQVMMRRDQFIRE- 558
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
D Q L L+++L LR L KE +
Sbjct: 559 -----------------------RDRTGQRHGLSVLPEDLGLFNALHRLRAQLAKE--QN 593
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V A+ IF ++TL+H++++ P L +INGIG K+++YG +L+E +
Sbjct: 594 VPAFVIFHDSTLRHIAEQRPTNINALSKINGIGSNKLTRYGHQLIELV 641
>gi|388598278|ref|ZP_10156674.1| ATP-dependent DNA helicase RecQ [Vibrio campbellii DS40M4]
Length = 611
Score = 342 bits (876), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 220/654 (33%), Positives = 346/654 (52%), Gaps = 87/654 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY-KLLYVTPEKVAKSDVLLRQL 506
DQ+ L + A ++ M ++E+L N Y + KL+YV+PE+V D + R L
Sbjct: 83 DQVDQLKANGVAAECINSTMP---REELLSVYNRMYTGHIKLVYVSPERVLMRDFIER-L 138
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
E+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D
Sbjct: 139 ENLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 194
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEF 614
+++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 195 ILERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEM 254
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 255 VTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHF 314
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 315 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE----------------- 357
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 358 KDDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPK 411
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 412 HF---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 469 HDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDT 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +KSD +K N KL++ LR LR + E
Sbjct: 521 AARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE-- 553
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 554 DGLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|408675008|ref|YP_006874756.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387856632|gb|AFK04729.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 715
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 222/656 (33%), Positives = 343/656 (52%), Gaps = 89/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFRP Q EII ++ D VLMPTGGGKS+ +Q+PA++ PGITLVISPL++L
Sbjct: 8 KKYFGYDSFRPLQAEIIETIIAQKDCMVLMPTGGGKSICFQVPAMVMPGITLVISPLIAL 67
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVL 502
+QDQ+ L IPA FL+ + EQ+ I + CK KLLY++PEK+ S+
Sbjct: 68 MQDQVQALKSNGIPAAFLNSTLSTIEQRTI-----EEDCKNGSLKLLYISPEKLF-SNNY 121
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L +++LN + I IDE+HCVS WGHDFRP+Y L LK FPN P++ALTATA
Sbjct: 122 LGFIKTLNVNQ----IAIDESHCVSTWGHDFRPEYIQLKALKDTFPNVPMVALTATADRV 177
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE------FYV 616
++D++ LG+ +IF SF+RPNL + RL+V H F+ K Y
Sbjct: 178 TRKDILNQLGIPEALIFISSFDRPNLNLRVLPGRNRLKVI----HEFIAKRTNQSGIIYC 233
Query: 617 VSLE-----------CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKP 665
+S + G +A YH +D RA VQ + KDEI +I AT+AFGMGI+K
Sbjct: 234 LSRKNTEDVAEGLRKLGIRAMHYHAGLDAQTRAEVQDAYIKDEIQVIVATIAFGMGIDKS 293
Query: 666 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFT 725
+VRFVIH+SLP ++E ++QE GRAGRDG +S +L+YS+ D I K MI Q
Sbjct: 294 NVRFVIHYSLPSNVESFYQEIGRAGRDGMKSDTLLFYSFGDIITRKEMI------QKSEL 347
Query: 726 PGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC 785
P + E L RM Y E+++ CRR + + +F E+ ++ C NC
Sbjct: 348 PDEMK----------EVQLAKLERMKQYAESEI-CRRRVLMSYFNEETNN-----DCGNC 391
Query: 786 SKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
++ ++ D T A+K + + Q+ + ++++ RGS N+ + + + L G
Sbjct: 392 DVCQNPPQRFDATIFAQKALSAIARAEQKAAMGMLIDILRGSQNRSIYEKGFQNLKTFGV 451
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
GK L E + + ++ + D+ LK+N L R+ ++RF
Sbjct: 452 GKELKYEEWAEYITQMLNSGIV-------DIAYDEHHYLKLNPVSWQVLKNERKVELVRF 504
Query: 905 -PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
P + +L + D P + + + D+ + L+ LR+LR
Sbjct: 505 EPYDVKKARLDE--------------------DVPRE-RTKKDV-IKDALFEKLRILRKK 542
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ +E + + + +F +ATL ++++ P +++ ++G+G+ K YG + I
Sbjct: 543 IAEE--QNIPPFVVFSDATLSDMAQKRPINRFQMMAVSGVGEQKFRMYGDEFINEI 596
>gi|453064584|gb|EMF05549.1| ATP-dependent DNA helicase RecQ [Serratia marcescens VGH107]
Length = 610
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 343/650 (52%), Gaps = 82/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A + EQ +++ + K+LY+ PE++ L
Sbjct: 78 MKDQVDQLLAYGVSAACYNSTQTREEQLDVMAGCRNG--TIKMLYIAPERLMMESFL--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+L A + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP+ PV+ALTATA + +
Sbjct: 133 --NLLDHCPPAMLAVDEAHCISQWGHDFRPEYRALGQLKQRFPSMPVIALTATADEATRG 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+V+ L L + ++ SF+RPN LW + +R + G+ Y +
Sbjct: 191 DIVRLLSLQDPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQD--QRGKSGIIYCNSRAK 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV
Sbjct: 249 VEDTAARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H +P++IE Y+QE GRAGRDG + +L Y +D ++ + E+ P
Sbjct: 309 VHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G+ L+ L M ++ E CRRL+ L +FGE H + C NC
Sbjct: 357 -----AGQQLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGE---GKH--ENCGNCDICLD 405
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D + A+K + V GQ+F +I+EV RG+ NQ ++++ H+ L ++G G+
Sbjct: 406 PPKRYDGLEDARKALSCVYRVGQRFGLGYIVEVLRGANNQRIREYGHDKLPVYGIGRDQT 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
+ +LR L+ F+ + + ++ S L++ ++ A ++ G + L P I
Sbjct: 466 TEHWTSVLRQLIHLGFITQNI-------AMHSALQLTEA-ARPVLRGEVALQLAVPR-IQ 516
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
S K S+S S Q N KL++ LR LR + E
Sbjct: 517 SLK-SRS----------------------SANQKSYGGNYDRKLFAKLRKLRKSIADE-- 551
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E + Y +F +ATL +++++P +LL +NG+G+ K+ ++G + I
Sbjct: 552 ENIPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAMI 601
>gi|421254067|ref|ZP_15709061.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_buffalo]
gi|401693064|gb|EJS87299.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_buffalo]
Length = 632
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 221/649 (34%), Positives = 349/649 (53%), Gaps = 82/649 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q E+I+AT+ G D V+M TG GKSL YQ+PAL G+TLVISPL+SL++
Sbjct: 33 VFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMK 92
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL I A +L+ + +TEQQ++ +L S KLLYV+PEKV +
Sbjct: 93 DQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSG--TLKLLYVSPEKVMTTSFF----- 145
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
L + ++ + IDE HC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++D+
Sbjct: 146 HLISHCKVSFVAIDETHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATADHATRQDI 205
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEFY 615
++ L L + ++ SF+RPN+ + EK + ++ + G+ Y + E
Sbjct: 206 LRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPIEQLCRFVLGQKGKSGIIYCNSRSKVERI 265
Query: 616 VVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
SL G A YH ++ AQR VQ+ + +D + ++ AT+AFGMGINK +VRFV+H
Sbjct: 266 AESLRNKGVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFD 325
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--RFN 732
LP+SIE Y+QE GRAGRD + VL+Y +D+ + ++ + P +P
Sbjct: 326 LPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILL-----EKPESPQRQIEALK 380
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ G E+ T CR L+ L +FGE H +K C NC +
Sbjct: 381 LQAIGEFAESQT---------------CRCLVLLNYFGE-----HQQKPCQNCDICLDPP 420
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K++ + GQ+F +++ V RG NQ +K ++HE LS++G GK +K
Sbjct: 421 KQYDGLIDAQKVMSTIYRIGQRFGVHYVIAVLRGLSNQKIKDNQHEQLSVYGIGKDKSKE 480
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V+ ++ L++ ++ A ++ G Q + L P
Sbjct: 481 HWQSVIRQLIHLGFIKQ------VFDHFNATLQLTEN-AKPILRGEQPLSLAMP------ 527
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ S L+ ++P R + Q + D L++ LR LR + + E
Sbjct: 528 ----------RISSLTSVVAPQRY---AMAQYDKD------LFARLRFLRKQIADK--EN 566
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ AY +F +ATLQ +++ P T+ E+L ING+G K ++ ++ I+
Sbjct: 567 IPAYIVFNDATLQEMAQYQPTTKAEMLAINGVGATKFERFAQPFMQIIQ 615
>gi|291615730|ref|YP_003518472.1| RecQ [Pantoea ananatis LMG 20103]
gi|378769205|ref|YP_005197680.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis LMG 5342]
gi|386081281|ref|YP_005994806.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis PA13]
gi|291150760|gb|ADD75344.1| RecQ [Pantoea ananatis LMG 20103]
gi|354990462|gb|AER34586.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis PA13]
gi|365188693|emb|CCF11643.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis LMG 5342]
Length = 608
Score = 342 bits (876), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 342/651 (52%), Gaps = 78/651 (11%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG FRP Q+ IIN +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL++D
Sbjct: 21 FGYQQFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ LL + A L+ M +QQ ++ + + + KLLY+ PE++ + L +S
Sbjct: 81 QVDQLLANGVAAACLNSTMTREQQQVVMADCRNG--RVKLLYIAPERLMMDNFL----DS 134
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L A + +DEAHC+SQWGHDFRP+Y LG ++Q+FP+ PV+ALTATA + + D++
Sbjct: 135 L-AHWQPCMLAVDEAHCISQWGHDFRPEYGALGQMRQRFPDLPVMALTATADETTRLDII 193
Query: 569 QALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEFYV 616
L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 194 NLLHMQDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGIIYCNSRAKVEDTA 253
Query: 617 VSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 675
L+ G YH ID AQRA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H +
Sbjct: 254 ARLQSRGLSVGAYHAGIDSAQRARVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 313
Query: 676 PKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVAN 735
P++IE Y+QE GRAGRDG + ++ Y +D ++ + E+ P
Sbjct: 314 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLE----EKQP------------ 357
Query: 736 SGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEK- 794
G + + L M ++ E CRRL+ L +FGE ++ C NC ++
Sbjct: 358 -GPLQDIERHKLNAMNAFAEAQT-CRRLVLLNYFGEGR-----QQPCGNCDICLDPPKRY 410
Query: 795 DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEAS 854
D A+K + + GQ+F +I+EV RG+ N +++ H+ L ++G GK +
Sbjct: 411 DGLVEAQKALSSIYRVGQRFGMGYIVEVLRGANNHRIREQGHDKLPVYGLGKENSHEHWV 470
Query: 855 RILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLS 914
+LR L+ + + + ++ S L++ ++ A ++ G ++L P I + S
Sbjct: 471 SVLRQLIHLGLVTQNI-------AMHSALQLTEA-ARPVLRGEVPLMLAVPRLITARPKS 522
Query: 915 KSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMA 974
G N KL++ LR LR + E E +
Sbjct: 523 SGSAKVYGG------------------------NYDRKLFAKLRKLRKAIADE--ENIPP 556
Query: 975 YHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + E
Sbjct: 557 YVVFNDATLLEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLLMIKEHLDE 607
>gi|192293669|ref|YP_001994274.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris TIE-1]
gi|192287418|gb|ACF03799.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris TIE-1]
Length = 616
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 227/646 (35%), Positives = 333/646 (51%), Gaps = 71/646 (10%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q I+ G D VLMPTGGGKSL YQLPAL+ G +V+SPL++L++
Sbjct: 24 VFGLPSFRGQQEAIVRHVADGGDALVLMPTGGGKSLCYQLPALLREGCGVVVSPLIALMR 83
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL++ + A L+ + + E +I ++L + LLYV PE++ L
Sbjct: 84 DQVAGLLESGVRAAALNSTLSYDEANDIEQQLLKG--ELDLLYVAPERLLTPRCL----- 136
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
SL AR ++ IDEAHCVSQWGHDFRP+Y GL + +KFPN P +ALTATA A + ++
Sbjct: 137 SLLARAKISLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPNVPRIALTATADALTRREI 196
Query: 568 VQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGH------FFLLKEFYVVS 618
+ L L + F SF+RPN+ +D + +L+ + H + L V
Sbjct: 197 AERLSLTDAPCFVSSFDRPNIRYSIVDKQNAPAQLKAFIDDRHRGHSGVVYCLSRAKVED 256
Query: 619 L-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ + G A YH + RA Q ++ ++ +I AT+AFGMGI+KPDVRFV H
Sbjct: 257 IAETLSKSGLTALPYHAGLPAEIRARNQDRFLNEDGVVIVATIAFGMGIDKPDVRFVAHL 316
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPKSIE Y+QE GRAGRDG+ S + Y SD ++ + MI + + G + F
Sbjct: 317 DLPKSIEAYYQETGRAGRDGKPSDAWMAYGLSDIVQQRRMIDE--------SSGSDAFKR 368
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+ G+ L +V CE+ CRR L +FGE C CDNC I
Sbjct: 369 VSMGK--------LDALVGLCES-TGCRRTRLLGYFGETAQHESC-GNCDNCLTPPKVI- 417
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D T A+KL+ TGQ+F + H+++V G L V + H+ LS+ G G + +
Sbjct: 418 -DGTVAAQKLLSCAYRTGQRFGAQHLIDVLLGRLTDRVTQFGHDKLSVFGIGGEFNEKQW 476
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
++R LV L + S+ +G+ LK+ ++ + ++ G V LR +
Sbjct: 477 RAVIRQLVSLGHLAPD---SEAFGA----LKLTET-SRAVLKGESEVALREQAGRPPRSK 528
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
S+ +G L+ G ++ +T P L+++L+ R+ + K GV
Sbjct: 529 SR------RGDLVGG----AQRETSGDP----------ALFAALKAWRSEVAK--ARGVP 566
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
AY + +ATL L+ PRT +EL I GIG K+ YG LL I
Sbjct: 567 AYVVLHDATLDSLAAAKPRTLDELRGIAGIGDKKLEHYGAALLAVI 612
>gi|332304550|ref|YP_004432401.1| ATP-dependent DNA helicase RecQ [Glaciecola sp. 4H-3-7+YE-5]
gi|332171879|gb|AEE21133.1| ATP-dependent DNA helicase RecQ [Glaciecola sp. 4H-3-7+YE-5]
Length = 599
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 210/650 (32%), Positives = 343/650 (52%), Gaps = 82/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG +FR QRE+I + G DV VLMPTGGGKSL YQ+PAL+ G+T+VISPL++L
Sbjct: 14 KNVFGYDAFRDGQREVIEQILQGKDVLVLMPTGGGKSLCYQIPALVLEGLTIVISPLIAL 73
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+ + + A +++ N+ E + R + +YKL+YV PE++ + D + R
Sbjct: 74 MKDQVDALVASGVSAAYINSNLSNEEMLNVYRGMQDG--RYKLIYVAPERLMQFDFIQR- 130
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L SLN +A +DEAHCVS WGHDFR +Y+ LG +KQ+FP PV+ LTATA + +
Sbjct: 131 LHSLN----VALFAVDEAHCVSHWGHDFRKEYRQLGQIKQQFPGVPVVGLTATADITTRS 186
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-------WMDCEKVAERLQVGLSYGHFFL-----LKE 613
D++Q L L +F+ SF+RPN+ + ++V + ++ G + + +
Sbjct: 187 DILQQLALEQPFVFKGSFDRPNIRYNQLFKYKATDQVIQYVKQQDGSGIIYCNSRKKVDD 246
Query: 614 FYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G A YH ++ R +Q+ + +D ++II ATVAFGMGINK +VRFV+H
Sbjct: 247 LSIALARQGINCAGYHAGLEGPIRDKIQRDFIQDNVDIIVATVAFGMGINKSNVRFVVHF 306
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LP+S+E Y+QE GRAGRDG + +L + D R++ I G
Sbjct: 307 DLPRSVEAYYQETGRAGRDGMPAEALLLFDEKDAARIRQWIGMG---------------- 350
Query: 734 ANSGRV-LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
N R+ +E + + + CRR + L +F E + + C CD C
Sbjct: 351 DNPARLDIELQKFAAMEAFAEAQT---CRRQVLLNYFSE-YSAEDC-GNCDICLDPPKRF 405
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ V +A+ ++ + GQ +S ++++V RG + + + H+ LS G GK + +
Sbjct: 406 DGKV--SAQMVLSCIYRLGQNVASQYVIDVLRGKKLKRIFEQGHDALSTFGIGKDKSDAH 463
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS-AINST 911
I+ L+ + FL ++ + S+VLK+ + +A L+ G+ + L P I+S
Sbjct: 464 WHNIIYQLIHKGFLRIDITQ-------SAVLKLTE-EARGLLAGKLELALAVPRLTIDSG 515
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K SK ++N KL++ L+ LR + + E
Sbjct: 516 KKSKLK----------------------------EMNYDRKLFAKLKHLRKSIAQR--ED 545
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
V + +F +ATL ++ ++P+++ E LE+NG+G+ K+ +YG L I +
Sbjct: 546 VPPFVVFSDATLADMADKLPQSKVEFLEVNGVGQTKLDRYGSEFLAAIAA 595
>gi|392963657|ref|ZP_10329081.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
gi|387847620|emb|CCH51120.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
Length = 715
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 224/655 (34%), Positives = 338/655 (51%), Gaps = 85/655 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ +G FRP Q +I+ + + G D VLMPTGGGKS+ +Q+PAL+ PGI +V+SPL++L
Sbjct: 22 KRYYGYDRFRPMQEDIVRSILRGRDTLVLMPTGGGKSVCFQIPALMMPGICVVVSPLIAL 81
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC---KYKLLYVTPEKVAKSDVL 502
++DQ+ L IPA F + EQ+ I D C K KLLYV+PEK+
Sbjct: 82 MKDQVEALHMNGIPAAFYNSTQSGKEQRAI-----EDDCVKGKIKLLYVSPEKMLTESFF 136
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
+ L+ +N ++ IDEAHC+S WGHDFRP+Y L +LK+ FP P +ALTATA
Sbjct: 137 VF-LKRIN----ISLFAIDEAHCISSWGHDFRPEYTQLHVLKEHFPTVPTVALTATADKL 191
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL--------QVGLSYGHFFLLKEF 614
+ D+ Q LG+ + +F SFNRPNL + RL Q + G + L
Sbjct: 192 TRNDIAQRLGMNDPAVFIASFNRPNLSLKVLPGTNRLPQIIKLLQQKPDTSGIIYCLSRK 251
Query: 615 YVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
SL E G KAAFYH +DP RA Q+ + +D++ I+CAT+AFGMGI+K +VR+
Sbjct: 252 STESLAAKLQEKGFKAAFYHAKMDPEDRAKTQEAFLRDDVRIMCATIAFGMGIDKSNVRW 311
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH++LPK+IE ++QE GRAGRDG + VL+YS++D K M+S E +P
Sbjct: 312 VIHYNLPKNIESFYQEIGRAGRDGAEAQTVLFYSFADVATYKDMLS----ESAP------ 361
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
AN G L L RM Y + + CRR + L +F E D CD C +
Sbjct: 362 ----ANLGLQL----AKLERMQQYADANT-CRRQILLSYFSE--DLPEPCGNCDVCRDPR 410
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D T A+K + + G++ + ++++ RGS +Q V + ++ + +GAG+ L
Sbjct: 411 --VTFDGTILAQKALSAIVRAGERVPMNLLIDILRGSRSQAVLQGGYDQIKTYGAGRDLR 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
E L L+ + + EV Y +L A ++ G + V L P
Sbjct: 469 FEEWRNYLHQLI--NVGVIEVAYDQHYALRKGIL------ADQVLFGGRKVDLVRPDDAP 520
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ K + K R+D L+ LR+LR L E
Sbjct: 521 KPVVEK----------VKTKTETQRDD----------------LFERLRVLRKKLADE-- 552
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
+ V Y IF + TL+ ++++ P T + L ++G+G+ K+ +G + L+ I ++
Sbjct: 553 QNVPPYVIFTDTTLEDMARQRPTTPDALRNVSGVGERKLQLFGKQFLDEIVGYVR 607
>gi|386817166|ref|ZP_10104384.1| ATP-dependent DNA helicase RecQ [Thiothrix nivea DSM 5205]
gi|386421742|gb|EIJ35577.1| ATP-dependent DNA helicase RecQ [Thiothrix nivea DSM 5205]
Length = 630
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 225/647 (34%), Positives = 335/647 (51%), Gaps = 69/647 (10%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
+G FR NQ++II + + G DV LMPTGGGKSL YQ+PAL G+ +V+SPL++L+QD
Sbjct: 15 YGYADFRLNQQDIIGSLLQGRDVLALMPTGGGKSLCYQIPALARDGVGIVVSPLIALMQD 74
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L Q I A FL+ + + ++ REL + LLYV PE++ + +L LE
Sbjct: 75 QVDALQQLGIRAAFLNSTLNYGTVLQVERELLEG--EIDLLYVAPERLL-GEKMLALLER 131
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
LN+ +A IDEAHCVSQWGHDFRP+YQ L +L ++FP P +ALTATA +++++
Sbjct: 132 LNSSVGIALFAIDEAHCVSQWGHDFRPEYQQLSVLAERFPGIPRIALTATADQRTRQEII 191
Query: 569 QALGLVNCIIFRQSFNRPNLWMDCEK---VAERLQVGLSYGHFFLLKEFYVVS------- 618
Q L L N ++ SF+RPN+ + ++L ++ H Y +S
Sbjct: 192 QQLRLQNADVYINSFDRPNIHYTIRQGQNARQQLWRFIADNHPQDAGIVYCLSRKKVEDT 251
Query: 619 ----LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
E G A YH + R Q+++ +++ II AT+AFGMGI+KPDVRFV H S
Sbjct: 252 ALWLAEQGRVALPYHAGMSADTRREHQQRFLREDGVIIVATIAFGMGIDKPDVRFVAHLS 311
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
LPKSIE Y+QE GRAGRDGQ S+ + Y D I ++ M+ + A + H++
Sbjct: 312 LPKSIEAYYQETGRAGRDGQPSNAWMAYGLQDVITLRQMMQESTASEQQKRVEHHKLQA- 370
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEK 794
M+ CE CRR L +FGE + CDNC E
Sbjct: 371 ---------------MLGLCEM-TTCRRQALLEYFGEP--TPEPCGNCDNCQSPPEVWEA 412
Query: 795 DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEAS 854
V A+K + V TGQ+F ++I++V G + +++ H+ LS +G G +++E
Sbjct: 413 AV--AAQKALSCVYRTGQRFGVNYIIDVLLGKDDSRIRQFGHDQLSTYGIGTEHSQAEWR 470
Query: 855 RILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLS 914
I R L+ +L +V D +G + K+ L+ G + LR
Sbjct: 471 NIFRQLIALGYLSVDV---DGHGGLRLT-----DKSRPLLRGEIELHLR----------- 511
Query: 915 KSDVTPAKGSLLSGKLSPSRNDTPSQPQNEV-DLNLSAK-LYSSLRMLRTLLVKEAGEGV 972
+ ++ RN P+ E +++ +AK L+ LR LRT L KE + V
Sbjct: 512 --------KEQMRERVRKERNRAERTPRPEFEEMSTAAKALFEQLRNLRTRLAKE--QEV 561
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
Y IF ++TL H++ P+T E + I GIG+ K+ +YG L I
Sbjct: 562 PPYVIFHDSTLLHMANEQPQTLEAMRSIPGIGERKLEQYGQAFLNVI 608
>gi|424044511|ref|ZP_17782123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-03]
gi|408887908|gb|EKM26398.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-03]
Length = 611
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 218/653 (33%), Positives = 343/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ M E + +++ + K L+YV+PE+V D + R LE
Sbjct: 83 DQVDQLKANGVAAECINSTMPREELLSVYNRMHTGHLK--LVYVSPERVLMRDFIER-LE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D+
Sbjct: 140 NLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 196 LERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEMV 255
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 256 TEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 315
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 316 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE-----------------K 358
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + T L M ++ E CRR + L +FGE D K C NC K
Sbjct: 359 DDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGEYRD-----KPCGNCDICLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 413 F---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 470 DYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD +K N KL++ LR LR + E +
Sbjct: 522 ARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE--D 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 555 GLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|157373532|ref|YP_001472132.1| ATP-dependent DNA helicase RecQ [Shewanella sediminis HAW-EB3]
gi|157315906|gb|ABV35004.1| ATP-dependent DNA helicase RecQ [Shewanella sediminis HAW-EB3]
Length = 607
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 219/669 (32%), Positives = 350/669 (52%), Gaps = 85/669 (12%)
Query: 374 DFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICP 433
D P L ++ + VFG +FR QRE+I + SG+D V+MPTGGGKSL YQLPAL P
Sbjct: 6 DEPQLDPLSSSLQSVFGYRTFREGQREVIEQSCSGYDCLVIMPTGGGKSLCYQLPALQLP 65
Query: 434 GITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTP 493
G+T+V+SPL+SL++DQ+ L Q + A +L+ ++ E IL++++ + KLLYV+P
Sbjct: 66 GLTIVVSPLISLMKDQVDSLTQMGVSAAYLNSSLPREESARILQQMHKG--EIKLLYVSP 123
Query: 494 EKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL 553
E++ + + R L L+ ++ IDEAHC+SQWGHDFRP+Y LG L++ FP+ P++
Sbjct: 124 ERLLQGHFIDR-LHELH----ISLFAIDEAHCISQWGHDFRPEYAALGKLREVFPHVPIM 178
Query: 554 ALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE 613
ALTATA + ++D+ L ++ SF+RPN+ VAE+L F ++
Sbjct: 179 ALTATADQATRKDICDRL-TISPFSLLTSFDRPNIRY---TVAEKLNAANQLRQFVTDQK 234
Query: 614 FYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
+ C GH A YH +RA VQ ++ KD+++I+ ATVA
Sbjct: 235 GTSGIIYCSSRRRVDEVAERLRLQGHNAEAYHAGKTQEERADVQDRFLKDQLDIVVATVA 294
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGINK +VR+V+H+ +PKS+E Y+QE GRAGRDG S ++ + +D RV+H+I Q
Sbjct: 295 FGMGINKSNVRYVVHYDIPKSVEAYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQS 354
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
PG + + L M ++ E CRR + L +F E
Sbjct: 355 -------EPGPQQ----------QVEFHKLNTMAAFAEAQT-CRRQVLLHYFDES----- 391
Query: 778 CKKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
+ C NC ++ + A+K++ + Q+F +H++EV RGS V + H
Sbjct: 392 ALEPCGNCDICLDPPKRYNGMQDAQKVLSCIYRLDQRFGVNHLIEVLRGSKAATVLERGH 451
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
+ LS G GK + I+R ++ F +++ + S +K+N S A +++ G
Sbjct: 452 DKLSTWGIGKDKSHEYWLSIIRQIIHLGFASQDITR-------GSSVKLNPS-ARSVLKG 503
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSS 956
++L P + T T +GS LN KL++
Sbjct: 504 EVELLLAEPRIVLQT-------TKRRGS-----------------STRAPLNYDRKLFAR 539
Query: 957 LRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
L+ LR L +E V Y +F +A+L ++ +P + E+L +NG+G+ K+S++G L
Sbjct: 540 LKQLRRQLAEEL--DVPPYLVFNDASLAEMAAMMPTSPGEMLAVNGVGERKLSRFGGEFL 597
Query: 1017 ETIESTIKE 1025
+ I + + +
Sbjct: 598 DEIANYLAD 606
>gi|148360486|ref|YP_001251693.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila str. Corby]
gi|148282259|gb|ABQ56347.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila str. Corby]
Length = 608
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 225/649 (34%), Positives = 345/649 (53%), Gaps = 81/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFRP Q +II +SG DV VLMPTGGGKSL YQ+PA++ G+ +V+SPL++L
Sbjct: 19 KKYFGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRRGVGIVVSPLIAL 78
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A + + ++ E + +L +L+ + + LLY+ PE++ + L R
Sbjct: 79 MEDQVTALKLQGIRAAYYNSSLTAEEARNVLNQLHHN--ELDLLYIAPERLISTSFLDRL 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E ++ IDEAHC+SQWGHDFRP+Y LG+LK FP+ P++ALTATA +E
Sbjct: 137 SECT-----ISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIALTATADKQTRE 191
Query: 566 DVVQALGLVNCIIFRQSFNRPNL------------WMDCEKVAERLQVGLSY-GHFFLLK 612
D+V L + SFNRPN+ ++ ++ Q G+ Y G ++
Sbjct: 192 DIVTKLN-YQPKKYVVSFNRPNIHYKVVPKTNAVKQLNLFLQSDTQQSGIIYCGTRHTVE 250
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
E G KA YH + +R VQ + D I+I+ AT+AFGMGI+KP+VRFV+H
Sbjct: 251 HLTAKLQELGLKARAYHAGLSHTERREVQNLFRYDRIDIVVATIAFGMGIDKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H LPKSIEGY+QE GRAGRDG + +L Y +D R++ I N
Sbjct: 311 HDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWI----------------MN 354
Query: 733 VA-NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ + R +ETN N M+++ E CRR + L +F E C K CD C
Sbjct: 355 IPLDEQRHIETNKLN--HMLAFAEAS-HCRRQILLRYFDEP-SHTEC-KNCDVCDNPPQ- 408
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A+K + + Q + +H ++V RGSL++ +K+ HE LS G GK + +
Sbjct: 409 -TADATEDAQKFLSCIYRLKQSYGLTHTIDVLRGSLSEKIKQSGHEHLSTFGIGKDKSAN 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP-SAINS 910
+ L+ +D+ ++++ + VL++ KA L+ G +++ L P + +NS
Sbjct: 468 YWKHLAWQLIHKDYCLQDMNHFN-------VLRLT-PKAIPLLKGEESISLTIPNNDLNS 519
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+K GK +PS +P+ S L+ LR LR L E E
Sbjct: 520 SK-------------KKGKQNPS-----FKPE-------SNPLFEKLRALRRQLADE--E 552
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ IF +ATL ++ P+ ++LL ++G+G+ K+++YG LE +
Sbjct: 553 NKPPFMIFSDATLHEMAHLKPKNSKQLLNVSGVGQHKLARYGHYFLEAL 601
>gi|423198737|ref|ZP_17185320.1| ATP-dependent DNA helicase RecQ [Aeromonas hydrophila SSU]
gi|404629927|gb|EKB26652.1| ATP-dependent DNA helicase RecQ [Aeromonas hydrophila SSU]
Length = 611
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 225/651 (34%), Positives = 338/651 (51%), Gaps = 83/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q EII ++G D VL PTGGGKSL YQ+PAL+ PG+ +V+SPL+SL
Sbjct: 21 QAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCYQIPALLRPGLGVVVSPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ + E + + + K++YV+PE++ + + + R
Sbjct: 81 MKDQVDSLRANGVAAVYINSALSREEMIQNFAAMRRG--EIKIVYVSPERLLQHEFMDRL 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E L IDEAHCVSQWGHDFRP+Y LG LKQ FP PV+ALTATA + +
Sbjct: 139 AELP-----LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRS 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGLSYGHFFLLKE 613
D++ L L + I SF+RPN+ ++ K AE+L G+ Y E
Sbjct: 194 DMLHRLELQDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KAA YH + R Q+ + KD+I I+ ATVAFGMGI+KP+VRFV+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLELRQQTQEAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK+IE Y+QE GRAGRDG + +L Y +D RV+ ++ N
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD----------------N 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
+ N + L+ L M ++ E CRR + L +FGE D K C NC
Sbjct: 358 IENPQQ-LQVEQYKLNVMAAFAEAQT-CRRQVLLNYFGEYND-----KPCGNCDICLDPP 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
KS+ D T+ A+K + V GQ F +++EV RGSLNQ +K H H+ LS +G GK
Sbjct: 411 KSY---DGTEDAQKALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQ 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ++R L+ + L + + + N+VL+ A
Sbjct: 468 SHEYWMSVIRQLIHKGLLTQNITR--------------------------NLVLQLTEA- 500
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + + +V K L +L P + + + N +L+ LR LR + ++
Sbjct: 501 -ARPVLRGEV---KLELAVPRLQPISSRKEKRNGLLDNANYDKRLFKELRALRKQIAED- 555
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E V Y +F +ATL +++ +P TE+E+L ING+G K+ ++G ++ I
Sbjct: 556 -EEVPPYVVFNDATLVEMAQLMPMTEDEMLAINGVGHRKLERFGEAFMDLI 605
>gi|193606281|ref|XP_001943152.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Acyrthosiphon pisum]
Length = 599
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/526 (36%), Positives = 284/526 (53%), Gaps = 52/526 (9%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
S+ KW DFPW ++++ K VF SFR Q IN T+S HD ++MPTGGGKSL
Sbjct: 58 SDHNKWIHTDFPWHERVKDTLKTVFKLDSFRSQQLAAINITLSKHDAILIMPTGGGKSLC 117
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPALI G TLV+SP+VSL++DQI+ + + ++ A +S + + + + +
Sbjct: 118 YQLPALIDQGFTLVVSPMVSLMEDQIIQIQKLDVNAKMISSYSSKEDVKLLFQMMTDIKS 177
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
KL+Y TPE++ KS + +L+ ++ + L+RI IDE HC + WGHDFRPDY L I K
Sbjct: 178 GLKLVYCTPERIVKSKTFMNKLQKAHSLKYLSRIAIDEVHCCTTWGHDFRPDYTHLTIFK 237
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAER 598
FP+ P+L LTATA++ V D + L + C + + SFNRPNL+ + +K +
Sbjct: 238 PMFPDIPILGLTATASSKVIVDTQKLLQIQGCALLKASFNRPNLYYEVKWKPEGKKCVDE 297
Query: 599 L----------QVGLSYGHFFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKD 647
L Q G+ Y E L E G + YH ++ R+ V ++W D
Sbjct: 298 LASLLKNKFKNQSGIIYTTSIKDCESLRKDLKEHGCRVGSYHAQLEGPLRSKVHRKWLND 357
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
E + AT+AFG+GI+KP+VRFVIHH+L KSIE ++QE GRAGRDG+ S+C+LYY SD
Sbjct: 358 EYQAVVATIAFGLGIDKPNVRFVIHHTLSKSIENFYQESGRAGRDGKPSTCLLYYKLSDV 417
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
++ M+ FT +T NL ++ YC N +CRR L
Sbjct: 418 FKLSTMV---------FTT--------------QTGLPNLYSIIKYCLNVKECRRKLIST 454
Query: 768 HFGEKFDSAHCKKTCDNCSKIKSF----IEKDVTDTAKKLVELVKLTGQQFSSSHILEVF 823
HF E ++S C CDNC K+ I K D L V+ +F++ +L+ +
Sbjct: 455 HFDESWESIDCDAMCDNCCNPKTVKSICINKYCLDVYSILNAAVE-NETKFTAQMLLDTW 513
Query: 824 RGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEE 869
G N+ V L L +++ A IL L+++ +LME+
Sbjct: 514 YGKGNKKV-------LLLDVQSPLFSRTRAEMILGELIVQGYLMED 552
>gi|156972686|ref|YP_001443593.1| ATP-dependent DNA helicase RecQ [Vibrio harveyi ATCC BAA-1116]
gi|156524280|gb|ABU69366.1| hypothetical protein VIBHAR_00344 [Vibrio harveyi ATCC BAA-1116]
Length = 625
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 220/654 (33%), Positives = 345/654 (52%), Gaps = 87/654 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 37 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 96
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY-KLLYVTPEKVAKSDVLLRQL 506
DQ+ L + A ++ M ++E+L N Y + KL+YV+PE+V D + R L
Sbjct: 97 DQVDQLKANGVAAECINSTMP---REELLSVYNRMYTGHIKLVYVSPERVLMRDFIER-L 152
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
E+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D
Sbjct: 153 ENLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRD 208
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEF 614
++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 209 ILDRLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEM 268
Query: 615 YVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 269 VTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHF 328
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 329 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE----------------- 371
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----K 789
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 372 KDDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPK 425
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 426 HF---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYSIGRDHS 482
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
I R L+ + L + + + +S L++ + +A L+ G + L P
Sbjct: 483 HDYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLALAVPRLDT 534
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ + +KSD +K N KL++ LR LR + E
Sbjct: 535 AARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE-- 567
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 568 DGLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 621
>gi|392533361|ref|ZP_10280498.1| ATP-dependent DNA helicase [Pseudoalteromonas arctica A 37-1-2]
Length = 607
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 227/673 (33%), Positives = 343/673 (50%), Gaps = 107/673 (15%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+K E K+VFG FR Q+ +I+A ++G D VL+PTGGGKS+ YQ+PAL+ G+T+
Sbjct: 12 VRKPETVLKQVFGYSEFRDGQKTVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTI 71
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ + KLLYV PEKV
Sbjct: 72 VISPLISLMQDQVSQLQALGVKAAYVNNSLAREEQQLVYQQLHQG--QIKLLYVAPEKVL 129
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ + L R L LN ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTA
Sbjct: 130 QREFLER-LSHLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTA 184
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE---- 613
TA + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 185 TADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKSQ 239
Query: 614 ---FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFG
Sbjct: 240 SGIIYCTSRKRVDDIAEKIADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFG 299
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+ + +
Sbjct: 300 MGINKPNVRFVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFF-EDID 358
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
++ RFN M S+ E CRR + L +F E + +
Sbjct: 359 DEQRRRVEEQRFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQR 396
Query: 780 KTCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHR 835
+ C NC KSF D T A++ + V Q+F +I+E+ RG+ ++ +
Sbjct: 397 EPCGNCDICLNPPKSF---DGTLVAQQALSCVYRADQRFGLGYIVELLRGANTSRIRDNN 453
Query: 836 HETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLII 895
H LS +G GK + ILR L+ + L +++
Sbjct: 454 HHELSTYGIGKDKSSEFWLSILRQLIHQGLLSQDIT------------------------ 489
Query: 896 GRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSG----KLSPSRNDTPSQPQNEV-DLNLS 950
Q LR +T A ++L G +L+ R Q+++ N
Sbjct: 490 --QGASLR--------------LTEAARAILKGEYALQLAEPRLQAKHVYQDKLAQFNYD 533
Query: 951 AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
KL++ LR LR L + V Y +F + TL +++ +P + E L+++G+G K++K
Sbjct: 534 KKLFARLRALRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNK 591
Query: 1011 YGVRLLETIESTI 1023
YG L I + +
Sbjct: 592 YGGEFLTAIRNYL 604
>gi|119470517|ref|ZP_01613220.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
gi|119446218|gb|EAW27495.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
Length = 607
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 226/665 (33%), Positives = 338/665 (50%), Gaps = 91/665 (13%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+K E K+VFG FR Q+ +I+A ++ D VL+PTGGGKS+ YQ+PAL+ G+T+
Sbjct: 12 VRKPETVLKQVFGYSEFRDGQKAVIDAALNAQDTLVLLPTGGGKSVCYQIPALVLEGVTI 71
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ K LLYV PEKV
Sbjct: 72 VISPLISLMQDQVAQLQALGVKAAYVNNSLAREEQQRVYQQLHQGLIK--LLYVAPEKVL 129
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ D L R L L ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTA
Sbjct: 130 QRDFLER-LSHLK----ISLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTA 184
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE---- 613
TA + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 185 TADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKNQ 239
Query: 614 ---FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFG
Sbjct: 240 SGIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFG 299
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+ + +
Sbjct: 300 MGINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFF-EDID 358
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
++ RFN M S+ E CRR + L +F E + C
Sbjct: 359 DEQRRRVEEQRFNA----------------MASFAEAQT-CRRQILLNYFSE-YQREQC- 399
Query: 780 KTCDNC-SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHET 838
CD C + KSF D T A++ + V Q+F +I+E+ RG+ ++ + H
Sbjct: 400 GNCDICLNPPKSF---DGTLVAQQALSCVYRAEQRFGLGYIVELLRGANTNRIRDNNHHQ 456
Query: 839 LSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQ 898
LS +G GK + ILR L+ + L +++ Q
Sbjct: 457 LSTYGIGKDRSSEFWLSILRQLIHQGLLSQDIT--------------------------Q 490
Query: 899 NVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLR 958
LR A + S+ + A+ L + + D +Q N KL++ LR
Sbjct: 491 GASLRLTEAARAILKSEYALQLAEPRLQAKHVY---QDKLAQ------FNYDKKLFARLR 541
Query: 959 MLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLET 1018
LR L + V Y +F + TL +++ +P + E L+++G+G K++KYG L
Sbjct: 542 SLRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGAFLTA 599
Query: 1019 IESTI 1023
I + +
Sbjct: 600 IRNYL 604
>gi|90581058|ref|ZP_01236858.1| putative ATP-dependent DNA helicase RecQ [Photobacterium angustum
S14]
gi|90437754|gb|EAS62945.1| putative ATP-dependent DNA helicase RecQ [Vibrio angustum S14]
Length = 616
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 345/654 (52%), Gaps = 83/654 (12%)
Query: 382 EANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISP 441
E+ +++FG FR Q ++I+A D V+MPTGGGKSL YQ+PAL+ GITLVISP
Sbjct: 19 ESVLQEIFGYQQFRVGQLDVIDAVNRDEDCLVIMPTGGGKSLCYQIPALLKEGITLVISP 78
Query: 442 LVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNS-DYCKYKLLYVTPEKVAKSD 500
L+SL++DQ+ L + A +++ ME + EIL N+ KL+YV+PE+V D
Sbjct: 79 LISLMKDQVDQLKANGVAAAYINSTME---RDEILTVFNAMKDATVKLVYVSPERVLTYD 135
Query: 501 VLLRQLESLNAREL-LARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
+ R R++ LA + +DEAHC+SQWGHDFRP+Y LG LKQ F N P++ALTATA
Sbjct: 136 FIDR------LRDVPLAMVAVDEAHCISQWGHDFRPEYAALGRLKQSFENLPIMALTATA 189
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPN----LWMDCEKVAE--------RLQVGLSYGH 607
+ + D++ LGL + SF+RPN LW + + + R Q G+ Y +
Sbjct: 190 DETTRHDIISRLGLQTPHEYLGSFDRPNIRYTLWEKHKPLTQIIRYVEGMRGQCGIIYCN 249
Query: 608 FFLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
E L + G +A YH +D +RA VQ+ + +D+I+I+ ATVAFGMGINKP+
Sbjct: 250 SRKKVEQISEKLRDKGIRAEAYHAGLDHIERANVQEAFQRDDIHIVVATVAFGMGINKPN 309
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VR+V+H +P++IE Y+QE GRAGRDG + V++Y SD ++ + +
Sbjct: 310 VRYVVHFDIPRNIESYYQETGRAGRDGLPAEAVMFYDPSDLAWLRRCLDE---------- 359
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
G+ + L M ++ E CRR + L +FGE H + C NC
Sbjct: 360 -------KEEGQQKDVERHKLHAMGAFAEAQT-CRRQVLLHYFGE-----HRDEPCGNCD 406
Query: 787 KIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
++ + + A+K + V Q F ++I+EV RG NQ +++H H+ LS +G G
Sbjct: 407 VCLDPPQRFNAVEVAQKALSCVYRVNQSFGITYIVEVLRGMQNQRIREHGHDKLSTYGIG 466
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
+ + +LR L+ +L + + + +SVL++ + KA L+ + L P
Sbjct: 467 REYSHEYWVSVLRQLIHLGYLTQNISR-------NSVLQLTE-KARPLLRAEIGLELAVP 518
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
N + K + KL+ + D KL++ LR LR +
Sbjct: 519 RLDNIARNMKVN-----------KLANRQYDK--------------KLFAKLRKLRKAIA 553
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E E + Y +F +A+L +++R+P + + L +NG+G+ K+ KYG L I
Sbjct: 554 DE--EDLPPYVVFNDASLMEMAERLPTSNGDFLAVNGVGQRKLEKYGEVFLGLI 605
>gi|332882051|ref|ZP_08449686.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357048209|ref|ZP_09109763.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
gi|332679975|gb|EGJ52937.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355528792|gb|EHG98270.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
Length = 608
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 224/653 (34%), Positives = 338/653 (51%), Gaps = 73/653 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG SFRP Q +II ++GHDV VLMPTGGGKSL YQ+PAL+ G T+VISPL+SL
Sbjct: 6 KRYFGFDSFRPLQEDIIGNILAGHDVVVLMPTGGGKSLCYQVPALMREGTTVVISPLISL 65
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L +PA L+ + E + + KLLY++PE+ L+ +
Sbjct: 66 MKDQVEGLRANGVPAAALNSMNDEAESARV--RAACLRGELKLLYISPER------LMLE 117
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L L ++ +DEAHC+SQWGHDFRP+Y LG+L+Q FP+ P++ALTATA +E
Sbjct: 118 LPYLIRDMKVSLFAVDEAHCISQWGHDFRPEYAQLGLLRQTFPDVPIVALTATADRLTRE 177
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCE-----KVAERLQVGLSYGH-------FFLLKE 613
D+ + L L + ++F SF+RPNL +D + K +R + L H + L K+
Sbjct: 178 DIQKQLALSDPVVFISSFDRPNLSLDVKRGYQKKDKDRAILELIARHPDDCGIIYCLSKK 237
Query: 614 FY--VVSLECGH--KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
V + GH A YH + +R Q + D + ++CATVAFGMGI+K +VRF
Sbjct: 238 TTESVAEMLRGHDIAAVAYHAGLPTEERERAQDDFIHDRVQVVCATVAFGMGIDKSNVRF 297
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH++LPKSIEG++QE GRAGRDG + VL+YS D +++ +
Sbjct: 298 VIHYNLPKSIEGFYQEIGRAGRDGLPAETVLFYSLGDLVQL------------------S 339
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
+F + R E N E L RM Y E+DV CRR + L +FGE H C NC K
Sbjct: 340 KFAQESGQR--EINMEKLRRMQEYAESDV-CRRRILLNYFGE-----HTDGDCGNCDVCK 391
Query: 790 SFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+ ++ D T A+K + + +Q S+ + ++ RG+ + V K ETL G G+ +
Sbjct: 392 NPPQRFDGTILAQKALSAIVRADEQVSARTLTDILRGNFSPEVTKGHFETLKTFGVGRDV 451
Query: 849 AKSEASRILRHLVIEDFLMEEVKKS--DVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ +D+LM+ ++ ++ + LK+ +S L GR+ +
Sbjct: 452 PPRD---------WQDYLMQMLQNGLFEIAYEEGNHLKLTESGRQVLYKGRKVELAVIRR 502
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
K + + P +L P+ + Q +L+ +LR LR L
Sbjct: 503 EEKPQKRGRKSLRPVAAPVLFTGGRPAAAPLAADSQ---------ELFEALRALRKRLAD 553
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+G Y + + LQ+L + P+T E ++GIG+ K KYG +E I
Sbjct: 554 --AQGFPPYIVMSDKVLQNLCEARPQTVEAFGTVSGIGEFKKEKYGKDFVEVI 604
>gi|359449260|ref|ZP_09238757.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
gi|392537893|ref|ZP_10285030.1| ATP-dependent DNA helicase [Pseudoalteromonas marina mano4]
gi|358044909|dbj|GAA75006.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
Length = 607
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 226/665 (33%), Positives = 338/665 (50%), Gaps = 91/665 (13%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+K E K+VFG FR Q+ +I+A ++ D VL+PTGGGKS+ YQ+PAL+ G+T+
Sbjct: 12 VRKPETVLKQVFGYSEFRDGQKAVIDAALNAQDTLVLLPTGGGKSVCYQIPALVLEGVTI 71
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ K LLYV PEKV
Sbjct: 72 VISPLISLMQDQVAQLQALGVKAAYVNNSLAREEQQRVYQQLHQGLIK--LLYVAPEKVL 129
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ D L R L L ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTA
Sbjct: 130 QRDFLER-LSHLK----ISLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTA 184
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE---- 613
TA + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 185 TADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKNQ 239
Query: 614 ---FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFG
Sbjct: 240 SGIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFG 299
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+ + +
Sbjct: 300 MGINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFF-EDID 358
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
++ RFN M S+ E CRR + L +F E + C
Sbjct: 359 DEQRRRVEEQRFNA----------------MASFAEAQT-CRRQILLNYFSE-YQREQC- 399
Query: 780 KTCDNC-SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHET 838
CD C + KSF D T A++ + V Q+F +I+E+ RG+ ++ + H
Sbjct: 400 GNCDICLNPPKSF---DGTLVAQQALSCVYRAEQRFGLGYIVELLRGANTSRIRDNNHHQ 456
Query: 839 LSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQ 898
LS +G GK + ILR L+ + L +++ Q
Sbjct: 457 LSTYGIGKDRSSEFWLSILRQLIHQGLLSQDIT--------------------------Q 490
Query: 899 NVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLR 958
LR A + S+ + A+ L + + D +Q N KL++ LR
Sbjct: 491 GASLRLTEAARAILKSEYALQLAEPRLQAKHVY---QDKLAQ------FNYDKKLFARLR 541
Query: 959 MLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLET 1018
LR L + V Y +F + TL +++ +P + E L+++G+G K++KYG L
Sbjct: 542 SLRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGAFLTA 599
Query: 1019 IESTI 1023
I + +
Sbjct: 600 IRNYL 604
>gi|300721460|ref|YP_003710735.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
gi|297627952|emb|CBJ88501.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
Length = 608
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 219/660 (33%), Positives = 347/660 (52%), Gaps = 81/660 (12%)
Query: 382 EANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISP 441
E +K FG FRP Q+++I+A + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SP
Sbjct: 14 EQTLRKTFGYQQFRPGQQQVIDAVLDGLDCLVVMPTGGGKSLCYQIPALVKDGLTLVVSP 73
Query: 442 LVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDV 501
L+SL++DQ+ L + A L+ +Q +I++ KLLY+ PE++ +D
Sbjct: 74 LISLMKDQVDQLRANGVEAECLNSTQSREQQFDIIQRCRQG--SIKLLYIAPERLV-TDN 130
Query: 502 LLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATA 561
L QL + +DEAHC+SQWGHDFRP+Y+ LG L+++FPN PV+ALTATA
Sbjct: 131 FLEQLHDWRP----VVLAVDEAHCISQWGHDFRPEYRALGQLRRRFPNLPVIALTATADN 186
Query: 562 SVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKV-----------AERLQVGLSYGHFF 609
+ ++D+V+ L L II SF+RPN+ + EK A++ + G+ Y +
Sbjct: 187 TTRQDIVRLLELHEPIIHLSSFDRPNIRYTLVEKYKPLDQLWSFVRAQQGKSGIIYCNSR 246
Query: 610 LLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L+ G A YH ++ QRA+VQ + +D++ I+ ATVAFGMGINKP+VR
Sbjct: 247 TKVEETAERLQKRGLSVAPYHAGLENDQRAWVQDAFQRDDLQIVVATVAFGMGINKPNVR 306
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV+H ++P++IE Y+QE GRAGRDG + VL+Y +D + ++ + E+ P
Sbjct: 307 FVVHFNIPRNIESYYQETGRAGRDGLPAEAVLFYDPADMVWLRRCL-----EEKP----- 356
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE--KFDSAHCKKTCDNCS 786
+G + L M ++ E CRRL+ L +FGE + D +C D
Sbjct: 357 -------AGEQQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGESRQKDCGNCDICLDPPK 408
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
+ ++ A+K + + GQ+F +I+EV RG+ NQ ++ H+ L ++G GK
Sbjct: 409 RYDGLVD------AQKALSCIYRVGQRFGIGYIVEVLRGANNQRIRDFGHDKLPVYGIGK 462
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
++ +LR L+ F+ + + S L++ ++ + ++ G ++ L P
Sbjct: 463 AQSQEHWMSVLRQLIHLGFISQNIAN-------YSALQLTEA-SRPILKGEVSLQLAVPR 514
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
I S K SRN Q N KL++ LR LR +
Sbjct: 515 -IQSLK--------------------SRN----QQHKSYSGNYDRKLFAKLRKLRKSIAD 549
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
E + + +F + TL ++++ P T ELL ING+G+ K+ ++G + I + F
Sbjct: 550 E--NNIPPFVVFNDVTLIEMAEQYPVTPNELLLINGVGQRKLERFGDAFMALIRDHFEGF 607
>gi|330444885|ref|ZP_08308540.1| ATP-dependent DNA helicase RecQ [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489195|dbj|GAA03037.1| ATP-dependent DNA helicase RecQ [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 616
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 220/656 (33%), Positives = 345/656 (52%), Gaps = 87/656 (13%)
Query: 382 EANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISP 441
E+ + VFG FR Q+++I+A D V+MPTGGGKSL YQ+PAL+ G+TLVISP
Sbjct: 19 ESVLQDVFGYQQFRVGQQDVIDAVNRDEDCLVIMPTGGGKSLCYQIPALLKEGVTLVISP 78
Query: 442 LVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDV 501
L+SL++DQ+ L + A +++ M + + + + KL+YV+PE+V D
Sbjct: 79 LISLMKDQVDQLKANGVAAAYINSTMSRDDILAVFEAMQAG--SVKLVYVSPERVLTHDF 136
Query: 502 LLRQLESLNAREL-LARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ R R++ LA + +DEAHC+SQWGHDFRP+Y LG+LKQ F N PV+ALTATA
Sbjct: 137 IDR------LRDVPLAMVAVDEAHCISQWGHDFRPEYAALGLLKQSFDNLPVMALTATAD 190
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPN----LWMDCEKVAE--------RLQVGLSYGHF 608
+ + D++Q LGL + SF+RPN LW + + + R Q G+ Y +
Sbjct: 191 ETTRHDIIQRLGLSQPHEYLGSFDRPNIRYTLWEKHKPLTQIIRYIEGMRGQCGIIYCNS 250
Query: 609 FLLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
E L + G +A YH ++ A+R VQ + +D+I+++ ATVAFGMGINKP+V
Sbjct: 251 RKKVEQISEKLRDNGIRAEAYHAGLEHAERVHVQDAFQRDDIHVVVATVAFGMGINKPNV 310
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H +P++IE Y+QE GRAGRDG + V++Y +D ++ + ++ P
Sbjct: 311 RFVVHFDIPRNIESYYQETGRAGRDGLPAEAVMFYDPADLAWLRRCL-----DEKP---- 361
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
G+ + L M ++ E CRR + L +FGE H + C NC
Sbjct: 362 --------EGQQKDVERHKLNAMGAFAEAQT-CRRQVLLHYFGE-----HRDEPCGNCDV 407
Query: 788 I----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHG 843
K F + + A+K + V Q F ++I+EV RG NQ +++H H+ LS +G
Sbjct: 408 CLDPPKRF---NAVEVAQKALSCVYRVQQSFGITYIVEVLRGMQNQRIREHGHDKLSTYG 464
Query: 844 AGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR 903
G+ + +LR L+ +L + + + +SVL++ + KA L+ ++ L
Sbjct: 465 IGRDYSHEYWVSVLRQLIHLGYLTQNISR-------NSVLQLTE-KARPLLRAEVSLELA 516
Query: 904 FPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
P N + K + KL V+ KL++ LR LR
Sbjct: 517 VPRLDNIARTMKVN-----------KL--------------VNRQYDKKLFAKLRKLRKA 551
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ E E + Y +F +A+L +++R+P + + L +NG+G+ K+ KYG L I
Sbjct: 552 IADE--EDLPPYVVFNDASLMEMAERLPTSNGDFLAVNGVGQRKLEKYGEVFLGLI 605
>gi|365833970|ref|ZP_09375421.1| ATP-dependent DNA helicase RecQ [Hafnia alvei ATCC 51873]
gi|364570619|gb|EHM48223.1| ATP-dependent DNA helicase RecQ [Hafnia alvei ATCC 51873]
Length = 612
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 215/652 (32%), Positives = 337/652 (51%), Gaps = 76/652 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA ++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIINAAIAGRDCLVVMPTGGGKSLCYQIPALVMEGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +QQE+ S KLLY+ PE++ D L Q
Sbjct: 78 MKDQVDQLQANGVSAACLNSTQNREQQQEVYAGCRSG--AIKLLYIAPERLMM-DNFLDQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N A + +DEAHC+SQWGHDFRP+Y LG++KQ+FP+ PV+ALTATA + +
Sbjct: 135 LPHWNP----ALLAVDEAHCISQWGHDFRPEYSALGLIKQRFPDIPVIALTATADDATRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ + L L + ++ SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIERLLSLNDPLVQVSSFDRPNIRYTLIEKFKPLDQLIRFVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D R+ VQ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTTARLQSRGFSVGAYHAGLDHEHRSSVQDAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + VL Y +D ++ + E+ P
Sbjct: 311 FDIPRNIEAYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G+ E L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 ---EGQQKEIERHKLNAMNAFAEAQT-CRRLVLLNYFGEGR-----QESCGNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D + A+K + + GQ+F +++E+ RG+ N +++ H+ L ++G G+
Sbjct: 408 KRYDGLEDAQKALSAIARVGQRFGIGYVVEILRGANNTRIREFGHDKLKVYGLGRDHTTE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ + + + ++ S L++ +S A ++ G + L P IN
Sbjct: 468 HWVSVLRQLIHLGLVTQNI-------AMHSALQLTES-ARPVLRGEVPLQLAVPRVIN-- 517
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
L + G N KL++ LR LR + E E
Sbjct: 518 -LKSRSSSSHASKNYGG-------------------NYDRKLFAKLRKLRKAIADE--EN 555
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++++P ELL ING+G+ K+ ++G + I +
Sbjct: 556 IPPYVVFNDATLLEMAEQMPIRASELLSINGVGQRKLDRFGAPFMTLIREHV 607
>gi|359441917|ref|ZP_09231801.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20429]
gi|358036178|dbj|GAA68050.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20429]
Length = 596
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 229/672 (34%), Positives = 341/672 (50%), Gaps = 107/672 (15%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
+K E K+VFG FR Q+ +I+A ++G D VL+PTGGGKS+ YQ+PAL+ G+T+V
Sbjct: 2 RKPETVLKQVFGYSEFRDGQKTVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIV 61
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
ISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ + KLLYV PEKV +
Sbjct: 62 ISPLISLMQDQVSQLQALGVKAAYVNNSLAREEQQLVYQQLHQG--QIKLLYVAPEKVLQ 119
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
+ L R L LN ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTAT
Sbjct: 120 REFLER-LSHLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTAT 174
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE----- 613
A + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 175 ADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKSQS 229
Query: 614 --FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGM 660
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFGM
Sbjct: 230 GIIYCTSRKRVDDIAEKIADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGM 289
Query: 661 GINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAE 720
GINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+ E
Sbjct: 290 GINKPNVRFVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDE 349
Query: 721 QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKK 780
Q RFN M S+ E CRR + L +F E + ++
Sbjct: 350 QRRRVE-EQRFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQRE 386
Query: 781 TCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRH 836
C NC KSF D T A++ + V Q+F +I+E+ RG+ ++ + H
Sbjct: 387 PCGNCDICLNPPKSF---DGTLVAQQALSCVYRADQRFGLGYIVELLRGANTSRIRDNNH 443
Query: 837 ETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIG 896
LS +G GK + ILR L+ + L +++
Sbjct: 444 HELSTYGIGKDKSSEFWLSILRQLIHQGLLSQDIT------------------------- 478
Query: 897 RQNVVLRFPSAINSTKLSKSDVTPAKGSLLSG----KLSPSRNDTPSQPQNEV-DLNLSA 951
Q LR +T A ++L G +L+ R Q+++ N
Sbjct: 479 -QGASLR--------------LTEAARAILKGEYALQLAEPRLQAKHVYQDKLAQFNYDK 523
Query: 952 KLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKY 1011
KL++ LR LR L + V Y +F + TL +++ +P + E L+++G+G K++KY
Sbjct: 524 KLFARLRALRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKY 581
Query: 1012 GVRLLETIESTI 1023
G L I + +
Sbjct: 582 GGEFLTAIRNYL 593
>gi|153834682|ref|ZP_01987349.1| ATP-dependent DNA helicase RecQ [Vibrio harveyi HY01]
gi|148868878|gb|EDL67938.1| ATP-dependent DNA helicase RecQ [Vibrio harveyi HY01]
Length = 611
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 344/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ M E + +++ + K L+YV+PE+V D + R LE
Sbjct: 83 DQVDQLKANGVAAECINSTMPREELLSVYNRMHTGHLK--LVYVSPERVLMRDFIER-LE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D+
Sbjct: 140 NLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 196 LERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEMV 255
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 256 TEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 315
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 316 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE-----------------K 358
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 359 DDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 413 F---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 470 DYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD +K N KL++ LR LR + E +
Sbjct: 522 ARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE--D 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 555 GLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|449516333|ref|XP_004165201.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 586
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/491 (41%), Positives = 267/491 (54%), Gaps = 59/491 (12%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
+N + WS F W + + +FG S+R NQREI+NA MSG DV V+M GGGKSL
Sbjct: 63 TNSENWSG-SFKWDSEADDVKLNIFGISSYRANQREIVNAVMSGRDVLVIMAAGGGKSLC 121
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL+ GI LV+SPL+SLIQDQ+M L I A+ L+ +++ I + L
Sbjct: 122 YQLPALLYDGIALVVSPLLSLIQDQVMGLAALGISASMLTSATSKEDEKLIYKNLEKGEG 181
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K+LYVTPEKV+KS + +LE L+ I IDEAHC SQWGHDFRPDY+ LGILK
Sbjct: 182 SMKILYVTPEKVSKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILK 241
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW-----------MDCE 593
+FPN PV+ALTATAT V+ D+V+ L + + F + NRPNL+ + +
Sbjct: 242 TQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVID 301
Query: 594 KVAERLQ-------VGLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQ 643
++AE +Q G+ Y F KE V+ E G A YH +D R V +
Sbjct: 302 QIAEFIQESYPNNESGIIY--CFSRKECEQVAKELRLRGISADHYHADMDSVAREKVHMR 359
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
WS + +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LYY
Sbjct: 360 WSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYYR 419
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
D R M+ NSG ENL +V YC++ CRR
Sbjct: 420 PGDVPRQSSMVF-----------------YENSG------LENLYGIVQYCQSRRQCRRS 456
Query: 764 LQLVHFGEKFDSAHCKKTCDNC----SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHI 819
+ HF E K C+ C S S +E +V + + T Q ++ +
Sbjct: 457 VFFRHFAEPL------KDCNGCFVTHSGWNSTLE--ALTIGVPMVAMPQWTDQTVNAKFV 508
Query: 820 LEVFRGSLNQY 830
++V++ L +
Sbjct: 509 MDVWKTGLRAF 519
>gi|350529733|ref|ZP_08908674.1| ATP-dependent DNA helicase RecQ [Vibrio rotiferianus DAT722]
Length = 611
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 344/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ M E + +++ + K L+YV+PE+V D + R LE
Sbjct: 83 DQVDQLKANGVAAECINSTMPREELLSVYNRMHTGHLK--LVYVSPERVLMRDFIER-LE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D+
Sbjct: 140 NLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 196 LERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEMV 255
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 256 TEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 315
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 316 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE-----------------K 358
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 359 DDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 413 F---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 470 DYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD +K N KL++ LR LR + E +
Sbjct: 522 ARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE--D 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 555 GLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|427717685|ref|YP_007065679.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
gi|427350121|gb|AFY32845.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
Length = 720
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 226/663 (34%), Positives = 354/663 (53%), Gaps = 86/663 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG FRP QR+II + D+ V+MPTGGGKSL +QLPAL+ G+T+V+S
Sbjct: 7 LEQALKYHFGYDRFRPGQRQIIEDALQNRDLMVVMPTGGGKSLCFQLPALLKKGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L NI ATFL+ ++ + + RE + KLLYV PE++ S+
Sbjct: 67 PLIALMQDQVESLRNNNISATFLNSSLNAYKVRS--REEAILNGRVKLLYVAPERLL-SE 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ +N + ++ IDEAHCVS+WGHDFRP+Y+ L L++++P+ P +ALTATAT
Sbjct: 124 RFLPFLDLINHQIGISSFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPDIPTVALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFF-LLKE------ 613
V+ D++Q LGL I SFNR NL+ + R + +Y L++E
Sbjct: 184 DRVRADIIQQLGLKQPSIHIASFNRQNLYYEI-----RSKTKYAYAELLELIRETEGSAI 238
Query: 614 FYVVS----------LECGHKAAF-YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y ++ L+ AA YH + +R+ Q ++ +D++ ++ AT+AFGMGI
Sbjct: 239 VYCLTRKKVDELTFKLQNDKVAALPYHAGLSDEERSKNQTRFIRDDVRVMVATIAFGMGI 298
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
NKPDVR VIH +P+++E Y+QE GRAGRDG+ S C +++S+ D ++ I Q Q
Sbjct: 299 NKPDVRLVIHFDIPRNLESYYQESGRAGRDGEPSRCTVFFSFGDIKTIEWSIDQKTDPQE 358
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
+ L +M+ Y E DCRR +QL +FGE+F +C C
Sbjct: 359 QLIA-----------------KQQLRQMIDYAEG-TDCRRTIQLGYFGERF-PGNC-GNC 398
Query: 783 DNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
DNC K +D T A K + V ++F HI++V RG+ NQ + ++H+ LS +
Sbjct: 399 DNCRYPKPV--QDWTIEAMKFLSCVARCKERFGMLHIIDVLRGAKNQKITLNQHDKLSTY 456
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK + R+L ++ L+E+ SD Y SVLK+N + + ++ ++ V +
Sbjct: 457 GIGKD-KTVDDWRMLGRSLLHQGLLEQT--SDGY----SVLKLN-ALSWEVMRRQRTVSI 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P A + +GS + ++ L LR LR
Sbjct: 509 AVPVA--------QKIAWEEGSAKAAEMEI--------------------LLQRLRSLRK 540
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
L E + V Y +F ++TL+ +++ P+T E +++G+G K+++YG + L I +
Sbjct: 541 QLADE--QSVPPYVVFQDSTLKLMAQVQPKTITEFGKLSGVGSHKLAQYGDKFLAEIRAY 598
Query: 1023 IKE 1025
+E
Sbjct: 599 RQE 601
>gi|424038225|ref|ZP_17776853.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-02]
gi|408894628|gb|EKM31275.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-02]
Length = 611
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 343/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ M E + +++ KL+YV+PE+V D + R LE
Sbjct: 83 DQVDQLKANGVAAECINSTMPREELLSVYNRMHTG--NLKLVYVSPERVLMRDFIER-LE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D+
Sbjct: 140 NLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 196 LERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEMV 255
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 256 TEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 315
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 316 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE-----------------K 358
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 359 DDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 413 F---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 470 DYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD +K N KL++ LR LR + E +
Sbjct: 522 ARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE--D 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 555 GLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|170587310|ref|XP_001898420.1| ATP-dependent DNA helicase, RecQ family protein [Brugia malayi]
gi|158594144|gb|EDP32732.1| ATP-dependent DNA helicase, RecQ family protein [Brugia malayi]
Length = 585
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/514 (38%), Positives = 282/514 (54%), Gaps = 52/514 (10%)
Query: 347 VEREPFIPK-IIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINAT 405
+ER+ I K I++ N S+ + W S +F W K +F FRP QR +INA
Sbjct: 40 LERKAQIEKRIVERNVENESSFRIWDSDEFQWMKDCRRILHDIFKLSDFRPLQRAVINAV 99
Query: 406 MSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSG 465
+S D V+M TG GKSL YQLPA++ GI LVISPLV+LI+DQ+ L + I A L+
Sbjct: 100 LSREDCLVVMSTGSGKSLCYQLPAVVMKGIVLVISPLVALIEDQLHQLRKLGIDAATLNQ 159
Query: 466 NMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHC 525
+ E I L +LLYVTPEK+AKS ++ +LE N + L I +DE HC
Sbjct: 160 STAKQEVNRIQTALTDSKASLRLLYVTPEKLAKSKRIMNRLEKCNEMKRLKLIAVDEVHC 219
Query: 526 VSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNR 585
SQWGHDFRPD++ L +LK++F P++ LTATATA V +DV LG+ ++FR FNR
Sbjct: 220 CSQWGHDFRPDFKFLNVLKRQFQAVPLIGLTATATADVIDDVKNMLGIPAAVVFRAGFNR 279
Query: 586 PNL-WMDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQW 644
PNL + C+K + S F + + + G KA+ YH +D +R ++W
Sbjct: 280 PNLHYSVCQKPS-------SDAEFVDILVELIKTRAKGVKASHYHAFLDAGKRNITHEKW 332
Query: 645 SKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSY 704
IN+I ATVAFGMGI+KP+VR+VIHHSLPKS+E Y+QE GR GRDG + C+L+Y
Sbjct: 333 LNGGINVIVATVAFGMGIDKPNVRYVIHHSLPKSLENYYQESGRVGRDGNEAHCILFYRL 392
Query: 705 SDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLL 764
+D R M+ +T NL ++SYC +CRR +
Sbjct: 393 NDLFRQSTMVCTE-----------------------KTGVRNLYSVLSYCIEASECRRSV 429
Query: 765 QLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVE----------------LVK 808
HF +++S+ C K CD C++ + DVT+ ++++E LV+
Sbjct: 430 IAEHFNVEWNSSLCSKMCDICAQTNAVECIDVTNYWRQMLEVLNAQKTDNNRITGMKLVE 489
Query: 809 LTGQQFS--SSHILEVFRGS--LNQYVKKHRHET 838
LT ++ S S ++E+ L+ Y+K+ H T
Sbjct: 490 LTWKKVSSVSRELIELLVAKLILDGYLKEDFHFT 523
>gi|73668704|ref|YP_304719.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str. Fusaro]
gi|72395866|gb|AAZ70139.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str. Fusaro]
Length = 881
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 224/678 (33%), Positives = 345/678 (50%), Gaps = 83/678 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG SFRP Q EII + DVFVLMPTGGGKS+ YQLPAL+ G+T+V+SPL+SL++D
Sbjct: 16 FGYTSFRPLQEEIIKDVLERKDVFVLMPTGGGKSMCYQLPALLMEGVTVVVSPLISLMKD 75
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L I A ++ E +++ + + K+LYV PE++ L +
Sbjct: 76 QVDGLEANGIAAACMNSAQSARENRDVKTAFLEN--RLKVLYVAPERLMMPGTL-----A 128
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGIL---KQKFPNTPVLALTATATASVKE 565
+ ++ + IDEAHC+S+WGHDFRP+Y+ L +L K FP+ P++ALTATAT V+E
Sbjct: 129 FLKKGKVSLLAIDEAHCISEWGHDFRPEYRKLKLLRDPKTGFPDIPIIALTATATERVRE 188
Query: 566 DVVQALGL---VNCIIFRQSFNRPNLWMDCEKVAE------------RLQVGLSYGHFFL 610
D++ L L + SFNR NL+ + E R + G+ Y
Sbjct: 189 DIISQLNLHLPPEKGPYVASFNRKNLYYEVRPKKETFSEITDYLRRHRGEAGIIYCQSRN 248
Query: 611 LKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
E L G +A YH + +R Q+ + KD++ II AT+AFGMGI+K +VRF
Sbjct: 249 SVEALTKKLNLAGFRALPYHAGLSDTERNRNQEMFIKDDVEIIVATIAFGMGIDKSNVRF 308
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH+ LP+++E Y+QE GR GRDG C+L++S D ++++ ISQ E+
Sbjct: 309 VIHYDLPRNLESYYQETGRGGRDGSPCECILFFSRGDRFKIEYFISQKTNEKEK------ 362
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
+ + L +MV+YCE + CRR + +FGE+ S C CD C K
Sbjct: 363 -----------DISLVQLRQMVAYCEGN-KCRRQTLMEYFGEEL-SEPC-GNCDCCLTPK 408
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
D T+ AKK + V+ Q+F ++++++V GS N+ ++ +RHE L HG+G
Sbjct: 409 DTF--DGTEAAKKFITCVQELNQRFGTNYVIDVLTGSKNKKIRHNRHERLKSHGSGLEFT 466
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR------ 903
K + + ++ L DV G+ +LK+N + + ++ G + V L
Sbjct: 467 KEQWKSLASEMINTGLL-------DVSGTKYPLLKLN-AMSRKILKGLEQVELVCPEGFV 518
Query: 904 -------FPSAINSTKLSKSD--------VTPAKGSLLSGKLSPSRNDTPSQPQNEVDLN 948
PS + TK K+D V P K S+ S L S + E D
Sbjct: 519 PEAEESFMPSTVAGTKGKKADDLSSSEEEVFPEKFSVASDILKASEARKTIISEKEPD-- 576
Query: 949 LSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKV 1008
L+ L+ LR + + Y +F + +L+ ++ R P EE I G+G+ K+
Sbjct: 577 --PILFERLKALRKKI--SLKRNLPPYIVFSDTSLKEMATRFPHNLEEFHSITGVGEHKL 632
Query: 1009 SKYGVRLLETIESTIKEF 1026
KYG L+ IE+ +++
Sbjct: 633 RKYGDIFLKEIENYCRDY 650
>gi|290513154|ref|ZP_06552516.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. 1_1_55]
gi|289774365|gb|EFD82371.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. 1_1_55]
Length = 618
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 337/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 28 QETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISL 87
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 88 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QVRLLYIAPERLM-LDNFLEH 144
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 145 LANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRLPQIPFMALTATADDTTRR 200
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 201 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 260
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 261 DTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 320
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 321 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 375
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 376 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 415
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G G+ +
Sbjct: 416 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQS 475
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 476 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVA 527
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 528 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 559
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 560 ENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKEFMALIRAHV 613
>gi|17227701|ref|NP_484249.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
gi|17135183|dbj|BAB77729.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
Length = 718
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 227/665 (34%), Positives = 354/665 (53%), Gaps = 81/665 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K FG +FRP QR+II + D+ V+MPTGGGKSL +QLPAL+ G+T+V+S
Sbjct: 7 LEQALKYHFGYDNFRPGQRQIIEDALQNRDLMVVMPTGGGKSLCFQLPALMKQGLTVVVS 66
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+QDQ+ L NI ATFL+ ++ + + RE K +LLYV PE++ S+
Sbjct: 67 PLIALMQDQVEALRNNNISATFLNSSLNAYQVRS--REEAILNGKVRLLYVAPERLL-SE 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ + + ++ IDEAHCVS+WGHDFRP+Y+ L L++++PN PVLALTATAT
Sbjct: 124 RFLPFLDLVKEKVGISIFAIDEAHCVSEWGHDFRPEYRQLKSLRKRYPNVPVLALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-----EKVAERLQV-----GLSYGHFFL 610
V+ D++Q LGL I SFNR NL+ + + AE L++ G + +
Sbjct: 184 DRVRADIIQQLGLKQPSIHLASFNRQNLYYEVRPKSKQAYAELLELIRDNEGSTIIYCLT 243
Query: 611 LKEFYVVSLECGH---KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
K+ ++ + A YH + +R+ Q ++ +D++ ++ AT+AFGMGINKPDV
Sbjct: 244 RKKVEELTFKLQKDKISALSYHAGLPDDERSKNQTRFIRDDVRVMVATIAFGMGINKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
R V+H +P+++E Y+QE GRAGRDG+ S C +++S+ D ++ I Q Q
Sbjct: 304 RLVVHFDIPRNLESYYQESGRAGRDGEASRCTIFFSFGDIKTIEWSIEQKTDPQEQLIA- 362
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ L +M+ Y E DCRR +QL +FGE+F +C CDNC
Sbjct: 363 ----------------KQQLRQMIDYAEG-TDCRRTIQLGYFGERF-PGNC-GNCDNCRY 403
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
K +D T A K + V ++F HI++V RG+ + ++ H+ LS +G GK
Sbjct: 404 PKPM--QDWTIEAMKFLSCVARCKERFGMLHIIDVLRGAKKDKIIQYEHDKLSTYGIGKD 461
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
E + R L+ + L + SD Y SVLK+N + + ++ ++ V L P A
Sbjct: 462 RTVDEWRTLGRSLLHQGLLEQ---TSDGY----SVLKLN-ALSWEVMKRQRQVFLSVPVA 513
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
K SL+ ++P + E L LR LR L E
Sbjct: 514 -------------QKLSLI--------QESPKFEEAEA-------LLHRLRSLRKQLADE 545
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFY 1027
+ V Y +F ++TL+ + + P+ E +++G+G K+++YG + + I + Y
Sbjct: 546 --QSVPPYVVFHDSTLKLMVQVQPQNLLEFSKLSGVGSHKLAQYGEKFIAEIRA-----Y 598
Query: 1028 KTDKN 1032
+ +KN
Sbjct: 599 RQEKN 603
>gi|329297040|ref|ZP_08254376.1| ATP-dependent DNA helicase RecQ [Plautia stali symbiont]
Length = 607
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 215/652 (32%), Positives = 341/652 (52%), Gaps = 81/652 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG FRP Q+ II +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL++D
Sbjct: 21 FGYQQFRPGQQTIIETALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ LL + A L+ +QQ++ + S K +LLY+ PE++ D L L+
Sbjct: 81 QVDQLLANGVAAACLNSTQTREQQQQVFADCRSG--KLRLLYIAPERLMM-DNFLDTLQH 137
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
N + +DEAHC+SQWGHDFRP+Y LG L+Q+ PV+ALTATA + + D+V
Sbjct: 138 WNP----VMLAVDEAHCISQWGHDFRPEYGALGQLRQRILQLPVMALTATADEATRNDIV 193
Query: 569 QALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEFYV 616
L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 194 HLLQMHDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKSGIIYCNSRAKVEDTA 253
Query: 617 VSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 675
L+ G YH ID QRA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H +
Sbjct: 254 ARLQSRGISVGAYHAGIDSEQRARVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 313
Query: 676 PKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVAN 735
P++IE Y+QE GRAGRDG + ++ Y +D ++ + E++P
Sbjct: 314 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLE----EKAP------------ 357
Query: 736 SGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE--KFDSAHCKKTCDNCSKIKSFIE 793
G + + L M ++ E CRRL+ L +FGE + +C D + +E
Sbjct: 358 -GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGRQQPCGNCDICLDPPRRYDGLVE 415
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
A+K + + TGQ+F S+I+EV RGS NQ ++ + H+ L ++G G+ ++
Sbjct: 416 ------AQKALSGIYRTGQRFGMSYIVEVLRGSTNQRIRDNGHDKLPVYGLGREQSQEHW 469
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+LR L+ +M+ + ++ S L++ ++ A ++ ++L P + T
Sbjct: 470 VSVLRQLIHLGMVMQNI-------AMHSALQLTEA-ARPVLRAEVPLMLAVPRTV--TVK 519
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
S+S G N KL++ LR LR + E E +
Sbjct: 520 SRSSAPKVYGG-----------------------NYGRKLFAKLRKLRKAIADE--ENIP 554
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + E
Sbjct: 555 PYVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLLMIKEHLDE 606
>gi|452209801|ref|YP_007489915.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
gi|452099703|gb|AGF96643.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
Length = 876
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 218/673 (32%), Positives = 353/673 (52%), Gaps = 72/673 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG +FRP Q EII + DVFVLMPTGGGKS+ YQLP+L+ G+T+V+SPL+SL
Sbjct: 10 RQYFGYTAFRPLQEEIIRDVLDRKDVFVLMPTGGGKSICYQLPSLLLDGVTVVVSPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A ++ E +++ + + K+LY+ PE++
Sbjct: 70 MKDQVDGLEANGIAAACMNSTQSPRENRDVKNAFLEN--RLKVLYIAPERLMMPGTF--- 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGIL---KQKFPNTPVLALTATATAS 562
+ + ++ IDEAHC+S+WGHDFRP+Y+ L +L K FP+ PV+ALTATAT
Sbjct: 125 --AFLKKGKVSLFAIDEAHCISEWGHDFRPEYRKLKLLRDPKNGFPDVPVIALTATATER 182
Query: 563 VKEDVVQALGL---VNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGH 607
VK+D+V LGL + SFNR NL+ + + R + G+ Y
Sbjct: 183 VKKDIVSQLGLNIDPEKGPYVASFNRSNLYYEVRPKKDTFSEITDYLLRHRGEAGIIYCQ 242
Query: 608 FFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
E L G +A YH + ++R+ Q+ + +D+++II AT+AFGMGINK +
Sbjct: 243 SRNNVETLTRKLNLAGFRALPYHAGLSDSERSRNQEMFIRDDVDIIVATIAFGMGINKSN 302
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH+ LP+++E Y+QE GR GRDG C+L++S D ++++ I+Q E+
Sbjct: 303 VRFVIHYDLPRNLESYYQETGRGGRDGSPCECILFFSRGDRFKIEYFIAQKTNEKEK--- 359
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ + L +MV+YCE + CRR + +FGE+ S C CD C
Sbjct: 360 --------------DISLVQLRQMVAYCEGN-KCRRQTLMEYFGEEL-STPC-GNCDTCL 402
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
+ K+ D T+ A+KL+ ++ Q+F ++++++V GS N+ ++++RHE L HG+G+
Sbjct: 403 RPKNTF--DGTEAARKLISCIQDLNQRFGTNYVIDVLTGSKNKKIRQNRHEKLKSHGSGR 460
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
K E R L ++ L+E V+G+ VLK+N + + ++ G + V L P
Sbjct: 461 EFTK-EQWRSLASEILNTGLLE------VHGAQYPVLKLN-AMSRKILNGLEKVELVCPD 512
Query: 907 AINSTKLSKSDVTPAKGSLL-----SGKLSPSRNDTPSQPQNEVDLNLSAK--------L 953
+S PA + + K P+R D+ + P K L
Sbjct: 513 GFIPGA-EESFTLPAPAGKIQEKSENDKQIPAREDSVAPPLKIPKSGTFPKSGTEHDPIL 571
Query: 954 YSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGV 1013
+ L+ LR + + + Y IF + +L+ ++ + P T +E I G+G K+ KYG
Sbjct: 572 FERLKALRKKIA--LNKNLPPYIIFSDTSLKEMAAKFPLTSDEFHSITGVGDHKLRKYGD 629
Query: 1014 RLLETIESTIKEF 1026
L+ I +++
Sbjct: 630 EFLKEIGDYCRDY 642
>gi|124002830|ref|ZP_01687682.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123992058|gb|EAY31445.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 712
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 216/653 (33%), Positives = 345/653 (52%), Gaps = 80/653 (12%)
Query: 382 EANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISP 441
EA ++ FG FRP Q++II+ ++G+D VLMPTGGGKSL YQ+PAL+ GI +V+SP
Sbjct: 7 EATLQQYFGYKQFRPLQKDIIDQVLAGNDALVLMPTGGGKSLCYQVPALMMEGIAIVVSP 66
Query: 442 LVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDV 501
L++L+QDQ+ L + +I A F + +EQ EI R+ K KLLYV+PEK+ S
Sbjct: 67 LIALMQDQVEALQRNDIAAAFYNSTQTSSEQSEIERQCMDG--KIKLLYVSPEKLL-SGT 123
Query: 502 LLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATA 561
+ L+ L + IDEAHC+S WGHDFRP+Y L +LK+ FP+ PV+ALTATA
Sbjct: 124 FIEFLQRLQ----INLFAIDEAHCISSWGHDFRPEYAQLKMLKKVFPSVPVVALTATADK 179
Query: 562 SVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKE 613
+ + D++ L L F SF+R N+ + R++ + Y G + L
Sbjct: 180 TTRNDILNQLNLQQPETFLASFDRENIRLHVSPGQNRIKKIIKYLETRPNQSGIIYCLSR 239
Query: 614 FYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
+ + G A +YH +D +RA VQ+ + KD+ +IICAT+AFGMGI+KP+VR
Sbjct: 240 KSTEQIAQKLKDAGFSADYYHAKMDSNRRAAVQQSFLKDDTHIICATIAFGMGIDKPNVR 299
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FVIH+++PK++EGY+QE GRAGRDG +S +L+YSY D ++ I
Sbjct: 300 FVIHYNMPKNVEGYYQEIGRAGRDGLKSDAILFYSYGDVKILREFIH------------- 346
Query: 729 NRFNVANSG-RVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N+ N G + L+ L RM+ + + D+ CRR + L +F E F ++ C NC
Sbjct: 347 ---NIDNEGFKALQ--FAKLERMLQFADADI-CRRRILLNYFNENF-----QQDCGNCDV 395
Query: 788 IKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
++ +K D T A+K + QQ + +++V RG+ NQ + ++ + + GAGK
Sbjct: 396 CRNPPQKFDGTILAQKALSACLRVKQQVGINALIDVLRGAKNQQIIENGYHQIKTFGAGK 455
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
++ + L+ ++ + + E+ A++ QN+ L+
Sbjct: 456 DVSFQDWRDYLQQMI--NLGVFEI-------------------AYD-----QNLALK--- 486
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
+ +L + A+ LLS + P++ L+ +LR LR +
Sbjct: 487 ---TAELGNQILAGAQKLLLSKPTEKTFAKAPAERPKSKKAVAKEGLFEALRTLRKQIAD 543
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + + IF +ATL +S P T+ + LE++G+ + K+ +YG + I
Sbjct: 544 --SQSIAPHIIFNDATLTEMSDNRPYTKADFLEVSGVTQTKMEQYGQTFINEI 594
>gi|209965714|ref|YP_002298629.1| ATP-dependent DNA helicase RecQ [Rhodospirillum centenum SW]
gi|209959180|gb|ACI99816.1| ATP-dependent DNA helicase RecQ [Rhodospirillum centenum SW]
Length = 610
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 223/662 (33%), Positives = 332/662 (50%), Gaps = 77/662 (11%)
Query: 375 FPWTKKLEANN--KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC 432
P T +A + V+G FR Q I+ ++G D VLMPTGGGKSL YQ+PAL+
Sbjct: 5 LPLTPTPDARTVLRNVWGYPDFRGMQAAIVEQVIAGGDALVLMPTGGGKSLCYQIPALVR 64
Query: 433 PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
PG+ +V+SPL++L++DQ+ L Q + A +L+ ++W E E+ E + LLYV
Sbjct: 65 PGVGIVVSPLIALMRDQVDALRQLGVRAAYLNSTLDWREALEV--ERACERGGLDLLYVA 122
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE++ L L R +A +DEAHCVSQWGHDFRP+Y IL ++FP+ P
Sbjct: 123 PERLVTPRFL-----DLLERSRIALFALDEAHCVSQWGHDFRPEYLQCSILHERFPDVPR 177
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAERLQV--------GL 603
+ALTATA A + D+V+ LGL +F SF+RPN+ + K ER Q+ G
Sbjct: 178 IALTATADAQTRADIVERLGLGGAEVFAASFDRPNITYRVQTKDNERRQLLDFIRHRHGE 237
Query: 604 SYGHFFLLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAF 658
G + + V S+ E G A YH ++ R Q ++ K E ++ ATVAF
Sbjct: 238 DAGIVYCMSRGKVESVAQWLREQGIDALPYHAGLEAETRQANQDRFIKAEGVVMVATVAF 297
Query: 659 GMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGV 718
GMGI+KP+VRFV+H P+S+E Y+QE GRAGRDG + ++ Y + D ++++ +
Sbjct: 298 GMGIDKPNVRFVVHMDPPRSLEAYYQETGRAGRDGLPAEALMLYGFQDVVQLRQWV---- 353
Query: 719 AEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC 778
E S H R T + L ++ +CE CRR L +FGE+
Sbjct: 354 -EASDAPARHKR-----------TERQKLEALLGFCET-ARCRRQTILTYFGEE-----A 395
Query: 779 KKTCDNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHE 837
+ C NC + + D T A+K + V TGQ+F H+++V RG + V + HE
Sbjct: 396 PQPCGNCDTCFTPVATYDGTVEAQKALSAVYRTGQRFGVGHLIDVLRGLATEKVVERGHE 455
Query: 838 TLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGR 897
L G G+ L+K+E + R LV FL +D G +L ++A ++
Sbjct: 456 KLKTFGVGRDLSKAEWQSVYRQLVAHGFLC-----ADPEGHGGLML----TEAATPVLKG 506
Query: 898 QNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSL 957
Q V +L K A+ +L G+ PS +P+ L+ L
Sbjct: 507 QEAV----------RLRKDPAAEARRTLRPGRSGPSERLSPA----------DDALWHEL 546
Query: 958 RMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLE 1017
+ LR L ++ +GV Y IF +ATL + + P L + G+G K+ +YG LE
Sbjct: 547 KALRLELARD--QGVPPYVIFHDATLMEMVRARPLDAVGLGLLPGVGSRKLDRYGEEFLE 604
Query: 1018 TI 1019
I
Sbjct: 605 VI 606
>gi|21227319|ref|NP_633241.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
gi|20905673|gb|AAM30913.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
Length = 896
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 218/673 (32%), Positives = 353/673 (52%), Gaps = 72/673 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG +FRP Q EII + DVFVLMPTGGGKS+ YQLP+L+ G+T+V+SPL+SL
Sbjct: 30 RQYFGYTAFRPLQEEIIRDVLDRKDVFVLMPTGGGKSICYQLPSLLLDGVTVVVSPLISL 89
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A ++ E +++ + + K+LY+ PE++
Sbjct: 90 MKDQVDGLEANGIAAACMNSTQSPRENRDVKNAFLEN--RLKVLYIAPERLMMPGTF--- 144
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGIL---KQKFPNTPVLALTATATAS 562
+ + ++ IDEAHC+S+WGHDFRP+Y+ L +L K FP+ PV+ALTATAT
Sbjct: 145 --AFLKKGKVSLFAIDEAHCISEWGHDFRPEYRKLKLLRDPKNGFPDVPVIALTATATER 202
Query: 563 VKEDVVQALGL---VNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGH 607
VK+D+V LGL + SFNR NL+ + + R + G+ Y
Sbjct: 203 VKKDIVSQLGLNIDPEKGPYVASFNRSNLYYEVRPKKDTFSEITDYLLRHRGEAGIIYCQ 262
Query: 608 FFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
E L G +A YH + ++R+ Q+ + +D+++II AT+AFGMGINK +
Sbjct: 263 SRNNVETLTRKLNLAGFRALPYHAGLSDSERSRNQEMFIRDDVDIIVATIAFGMGINKSN 322
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFVIH+ LP+++E Y+QE GR GRDG C+L++S D ++++ I+Q E+
Sbjct: 323 VRFVIHYDLPRNLESYYQETGRGGRDGSPCECILFFSRGDRFKIEYFIAQKTNEKEK--- 379
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ + L +MV+YCE + CRR + +FGE+ S C CD C
Sbjct: 380 --------------DISLVQLRQMVAYCEGN-KCRRQTLMEYFGEEL-STPC-GNCDTCL 422
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
+ K+ D T+ A+KL+ ++ Q+F ++++++V GS N+ ++++RHE L HG+G+
Sbjct: 423 RPKNTF--DGTEAARKLISCIQDLNQRFGTNYVIDVLTGSKNKKIRQNRHEKLKSHGSGR 480
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
K E R L ++ L+E V+G+ VLK+N + + ++ G + V L P
Sbjct: 481 EFTK-EQWRSLASEILNTGLLE------VHGAQYPVLKLN-AMSRKILNGLEKVELVCPD 532
Query: 907 AINSTKLSKSDVTPAKGSLL-----SGKLSPSRNDTPSQPQNEVDLNLSAK--------L 953
+S PA + + K P+R D+ + P K L
Sbjct: 533 GFIPGA-EESFTLPAPAGKIQEKSENDKQIPAREDSVALPLKIPKSGTFPKSGTEHDPIL 591
Query: 954 YSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGV 1013
+ L+ LR + + + Y IF + +L+ ++ + P T +E I G+G K+ KYG
Sbjct: 592 FERLKALRKKIA--LNKNLPPYIIFSDTSLKEMAAKFPLTSDEFHSITGVGDHKLRKYGD 649
Query: 1014 RLLETIESTIKEF 1026
L+ I +++
Sbjct: 650 EFLKEIGDYCRDY 662
>gi|319957274|ref|YP_004168537.1| ATP-dependent DNA helicase recq [Nitratifractor salsuginis DSM 16511]
gi|319419678|gb|ADV46788.1| ATP-dependent DNA helicase RecQ [Nitratifractor salsuginis DSM 16511]
Length = 594
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 219/655 (33%), Positives = 344/655 (52%), Gaps = 93/655 (14%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG+ FRP Q E ++A +S D+ +++PTGGGKSL YQLP L+ PG+T+V+SPL++L
Sbjct: 8 KRHFGHQGFRPLQEEAVDAILSRRDLLMILPTGGGKSLCYQLPTLMMPGVTIVVSPLLAL 67
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+ DQ+ LL+ IPA L + EQQE +R L + KLLYV PE++ +D +
Sbjct: 68 MHDQVTALLEMGIPAAMLGSMQSFEEQQETVRRLRRG--ELKLLYVAPERL-NNDFFSQL 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L +L + VIDEAHCVS+WGH+FR DY+ L +L++++P P+ A TATAT V+
Sbjct: 125 LSTLP----INFFVIDEAHCVSEWGHEFREDYRRLSLLRERYPQVPIAAFTATATREVEA 180
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE--------FYVV 617
D+ LGL + + R S R NL V+ R +VG L Y +
Sbjct: 181 DIASQLGLRDPVRVRGSLYRENL-----TVSARHRVGDGRAQLLDLLSAHKGESGIVYTL 235
Query: 618 SLEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
S + G+ AA +H + +R V +++ D+I + ATVAFGMGI+K +
Sbjct: 236 SRKQTESLADHLRAKGYSAATFHAGLSAEERRRVYEEFVADKIETVVATVAFGMGIDKSN 295
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
+R+V H SLPKS+E Y+QE GRAGRDG + +L + D + + I ++ P TP
Sbjct: 296 IRYVAHMSLPKSVENYYQEIGRAGRDGLEAETLLLFGAQDLLMQRRFI-----DELPETP 350
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ ++ E L R+VS CR +FGE C + CDNC
Sbjct: 351 ----YKAHAYAKL-----EKLWRLVS----GEACRHKALADYFGETL--PECGERCDNC- 394
Query: 787 KIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
+ +E+ ++T+ A+K + +GQ+F + +++++ RGS ++ + ++ HE LS++G G
Sbjct: 395 -LAPAVERLEITEAARKFLAAAWRSGQRFGAGYLIDLLRGSRDRRILENGHEALSVYGIG 453
Query: 846 KHLAKSEASRIL-RHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
K + + S + R L + + E K + + + +LK G + V++R
Sbjct: 454 KEYDRKQWSSVADRLLELGGIALNEHKGVVLTETGAQILK-----------GEREVLIR- 501
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
++ K TP QP EVD + +L+ +LR LR +
Sbjct: 502 -----KERMEKERRTPK-----------------PQPIEEVDYD--RELFDALRQLRKEI 537
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E GV Y +F + TL+ LS P+T+EE+LE++GIG+ K +YG L +
Sbjct: 538 ATE--NGVPPYVVFSDKTLRELSIHRPQTQEEMLEVHGIGEVKFERYGEEFLHLL 590
>gi|308275177|emb|CBX31774.1| ATP-dependent DNA helicase recQ [uncultured Desulfobacterium sp.]
Length = 604
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 224/652 (34%), Positives = 343/652 (52%), Gaps = 78/652 (11%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR +QR+II + V+MPTGGGKSL YQ+PALI G+T+V+SPL+SL+
Sbjct: 11 EVFGYSEFRSHQRKIIENVLQKRHTLVIMPTGGGKSLCYQIPALIFEGLTIVVSPLISLM 70
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ L + + A FL+ ++ E + KLLY+ PE + R L
Sbjct: 71 KDQVEQLTELGVSALFLNSSLSGEEYSR--NVELLKKKEVKLLYLAPETLLTQ----RTL 124
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
L++ ++ + IDEAHC+S+WGHDFRP+Y+ L ++ FP+ +ALTATAT V+ED
Sbjct: 125 SLLSSLQIDC-MAIDEAHCISEWGHDFRPEYRKLAGVRTHFPSATCIALTATATLRVRED 183
Query: 567 VVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--GH--------FFLLKE--- 613
+ +LG F SFNR NL+++ + + + + GH F K+
Sbjct: 184 IKSSLGFDVSNEFIASFNRQNLYLNITPKDKPVSQTIDFLSGHSGESGIIYCFSRKQVDK 243
Query: 614 FYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
Y + + G+ YH + +RA Q+ + KD++ II AT+AFGMGINKP+VRFVIH
Sbjct: 244 LYEILQDGGYSVRPYHAGLSDKERAVNQELFIKDDVQIIVATIAFGMGINKPNVRFVIHF 303
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LPK+IE Y+QE GRAGRDG ++ CVL + Y D ++K+ I+Q ++ V
Sbjct: 304 DLPKNIETYYQEIGRAGRDGLKAECVLLFGYGDIRKIKYFINQKSEDEQL---------V 354
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
AN +L ++ + E V CRR L +FGE + C CDNC +
Sbjct: 355 ANI---------HLNALLQFAETSV-CRRRPLLNYFGEDYQIEKC-DMCDNCLAGDKEL- 402
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D+T A+K + VK T + F +HI+++ RGS +Q + HE LS +G GK + +
Sbjct: 403 ADITVLAQKFLSCVKRTNEMFGINHIIDILRGSQSQKIYNFEHEKLSTYGIGKDYSGKQW 462
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+ R + ++++ K YGS LK+ + KA+++ G + V +
Sbjct: 463 FHLARQFINNGLMIQDAK----YGS----LKLTE-KAYDVFKGTEKVF---------GMI 504
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
+ D+ K Q + EV+ + L+ LR++R L +A GV
Sbjct: 505 EEEDLRQVK-----------------QQKREVENDYDRVLFEKLRIMRKELADKA--GVP 545
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
Y IF + TL +S PR++E L I+G+G K KYG L+ I S +++
Sbjct: 546 PYIIFPDKTLIEMSTHYPRSDESLFYIHGVGTVKHKKYGAYFLDIINSYLEQ 597
>gi|206578880|ref|YP_002241119.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae 342]
gi|206567938|gb|ACI09714.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae 342]
Length = 608
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 337/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QVRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKEFMALIRAHV 603
>gi|428778146|ref|YP_007169933.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
gi|428692425|gb|AFZ45719.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
Length = 709
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 216/659 (32%), Positives = 340/659 (51%), Gaps = 77/659 (11%)
Query: 380 KLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVI 439
+LE K+ FG +FRP Q+ II A DV +MPTGGGKSL YQLPAL+ PG+ +V+
Sbjct: 3 ELETALKQYFGYETFRPGQKAIIEAVYQQRDVLAVMPTGGGKSLCYQLPALLKPGLAVVV 62
Query: 440 SPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
SPL++L+QDQ+ L + I ATFL+ ++ T ++ R L+ + KLLY+ PEK+ S
Sbjct: 63 SPLIALMQDQVETLQKNGIAATFLNSSL--TAEEARSRRLSILNGEMKLLYLAPEKLV-S 119
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L+++ + L+ IDEAHC+S+WGHDFRP+Y+ L L+ FP P++ALTATA
Sbjct: 120 PASKTFLQAVQEKHGLSLFAIDEAHCISEWGHDFRPEYRQLKTLRSLFPKIPMIALTATA 179
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAE----------RLQVGLSYGHFF 609
T V+ D++ L L + SF+RPNL+ + + R Q G +
Sbjct: 180 TERVRSDIIHQLTLDQPKVQITSFDRPNLYYEVQPKQRQHYNQLFKFIRHQTGSGIVYCL 239
Query: 610 LLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
+ V+ G A YH + R+ Q ++ +D++ ++ AT+AFGMGI+KPD
Sbjct: 240 SRRRVEEVAFRLKKDGISALPYHAGMSDGNRSDYQTRFLRDDVQVMVATIAFGMGIDKPD 299
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
+RFV+H+ LP+++E Y+QE GRAGRD + + C+L + D +++ ISQ E+S
Sbjct: 300 IRFVVHYDLPRNLENYYQEAGRAGRDSEPAQCLLLFGAKDIHTIEYFISQKEDEKSQ--- 356
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ L +++ Y E DCRR +QL +FGE F + +C CDNC
Sbjct: 357 --------------RLARQQLRKVIDYAEG-TDCRRTIQLSYFGEHF-AGNC-GNCDNCL 399
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
K +D T A+K + V ++F SHI+++ RGS N+ ++++ H LS +G GK
Sbjct: 400 NPKPI--EDWTIEAQKFLSCVARCRERFGMSHIIDILRGSKNKKIEQNGHHLLSTYGIGK 457
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
E + R L+ + FL E +D Y VLK+NQ L R + PS
Sbjct: 458 DKTVEEWRNLARSLLHQGFLAE---TTDGY----RVLKLNQRSWEILRQKRTVYIAVLPS 510
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
+ + N +D+ + +L LR R L
Sbjct: 511 S-----------------------------QKRKSHNTLDIE-TQQLLIRLRKKRKWLAD 540
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y IF + L+ +++ P+ ++L + +G+ + K+ +YG + I S ++E
Sbjct: 541 T--QSTAPYMIFSDQALREMAQIKPKHLDQLADFSGVTEHKLHQYGEAFISEIRSFLQE 597
>gi|344338286|ref|ZP_08769218.1| ATP-dependent DNA helicase RecQ [Thiocapsa marina 5811]
gi|343801568|gb|EGV19510.1| ATP-dependent DNA helicase RecQ [Thiocapsa marina 5811]
Length = 734
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 226/651 (34%), Positives = 338/651 (51%), Gaps = 78/651 (11%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG FR Q EII+ ++G D VLMPTGGGKSL YQ+PAL+ PG+ +V+SPL++L+
Sbjct: 11 RVFGYDRFRGAQAEIIDRVIAGGDALVLMPTGGGKSLCYQIPALLRPGVGVVVSPLIALM 70
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
QDQ+ L Q + A FL+ ++ E + + + S L+YV PE++ L +
Sbjct: 71 QDQVDALRQLGVRAAFLNSSLTLQEARAVEEAMLSG--DLDLVYVAPERL-----LTERF 123
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
+L R +A IDEAHCVSQWGHDFRP+Y L +L +++P P +ALTATA A + +
Sbjct: 124 LALLERVQVALFAIDEAHCVSQWGHDFRPEYIQLHLLHERWPRIPRVALTATADAPTRAE 183
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV------------GLSYGHFFLLKE 613
++ LGL F SF+RPN+ + EK + R Q+ G+ Y E
Sbjct: 184 ILTRLGLEQAGQFVSSFDRPNIRYRIVEKASPRQQLIAFLRTEHPGDAGIVYCLSRRKVE 243
Query: 614 FYVVSLECGHKAAF-YHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L AA YH + R Q ++ ++E +I AT+AFGMGI+KPDVRFV H
Sbjct: 244 ETAAYLATQGIAALPYHAGLPAETRRTHQARFLREEGVVIVATIAFGMGIDKPDVRFVAH 303
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKS+E Y+QE GRAGRDGQ + + Y D + ++ MI AE+ RF
Sbjct: 304 LDLPKSLEAYYQETGRAGRDGQAADAWMTYGLGDVVMLRRMIEDSEAEE--------RFK 355
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ L M+ +CE +CRR + L +FGE H K C NC ++
Sbjct: 356 --------RVEMQKLDSMLGFCET-TECRRQVLLNYFGE-----HLPKPCGNCDTCLEPV 401
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T A+K + + TGQ+F SS++++V G N+ +++ H+ ++ G G+ L+
Sbjct: 402 ATWDGTQAAQKALSCIYRTGQRFGSSYLVDVLLGKKNERIRRFGHDQVTTFGIGQELSAD 461
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF-PSAINS 910
+ + R LV F+ + D G + L QS+ L+ G + + LR P S
Sbjct: 462 QWKSVYRQLVAAGFI-----RVDFEGHGALCL-TEQSRP--LLRGERTLRLRQDPDRKKS 513
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
T + PA + PS P+ + L+ +LR R L E +
Sbjct: 514 TGAGRK---PAA-------------ELPSDPE-------ALALWEALRDYRRQLALE--Q 548
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
V AY IFG+ATL+ + PR +EL I+G+G+AK+ ++G L+ + +
Sbjct: 549 DVPAYVIFGDATLREILTYRPRDRDELSRISGVGQAKLERFGDGFLKLLAA 599
>gi|94264239|ref|ZP_01288034.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[delta proteobacterium MLMS-1]
gi|93455350|gb|EAT05554.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[delta proteobacterium MLMS-1]
Length = 605
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 341/648 (52%), Gaps = 68/648 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFRP Q+EI+ + G D FVLMPTGGGKSL YQLPAL PG+ +V+SPL+SL
Sbjct: 9 RDVFGYDSFRPQQQEIVERLLGGGDAFVLMPTGGGKSLCYQLPALHRPGLAVVVSPLISL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A F + + E + +L ++ + LLYV PE++ SD L R
Sbjct: 69 MKDQVDALRANGVRAAFYNSALGADEARRVLARMHDG--QLDLLYVAPERLLHSDFLGR- 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L L LA IDEAHC+SQWGHDFRP+Y LG+L+Q FP P++ALTATA +
Sbjct: 126 LGQLK----LALFAIDEAHCISQWGHDFRPEYTKLGLLRQNFPGVPLIALTATAEPHTRR 181
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D++ L + + F SF+RPN+ L++ G + L V
Sbjct: 182 DILARLQIADEAAFITSFDRPNIRYTVRDKKRPFDQLLAFVGSRPREAGIVYCLSRKRVE 241
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+ G A YH + +R Q + +D+ II ATVAFGMGI+K ++R+V+H
Sbjct: 242 EVTARLNAAGFAARAYHAGLGAEEREAAQDAFLRDDTLIIVATVAFGMGIDKSNIRYVVH 301
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK+IEGY+QE GRAGRDG + +L + + D + +I E+
Sbjct: 302 YDIPKNIEGYYQETGRAGRDGLPAEALLLFGFGDVAVARGLIDNSQNEER---------- 351
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
R +E++ N MV + + CRR + L +FGE + C CD C + +
Sbjct: 352 -----RRVESHKLNA--MVGFAQAS-GCRRRVLLGYFGEPLNE-DC-GNCDTCLEPPEML 401
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
E VT+ A+K++ + GQ F +H+++V RGS +Q +++ H LS +G G K
Sbjct: 402 E--VTEEARKVLSCIYRVGQAFGLNHVIDVLRGSQSQRIQQLGHHRLSTYGIGADRDKDF 459
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ +LRHL+ ++ ++V YG VLK+ +S + L+ G ++ + P
Sbjct: 460 WAALLRHLIHHGYIEQDVGN---YG----VLKLKES-SRPLLRGEISLSMGRPRF----- 506
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
T A G GK +P+++ Q +D + A L+ LR LR + G+GV
Sbjct: 507 -----QTAATG----GKGAPAKSKKGEQ-LAALDESQRA-LFEGLRRLRKEIAD--GDGV 553
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ +F + +L ++ P T +E L+I G+G+ K+ +YG L I+
Sbjct: 554 PPFVVFSDTSLLAMATTQPTTPDEFLQIPGVGQHKLQQYGEAFLAAIK 601
>gi|145637733|ref|ZP_01793385.1| organic solvent tolerance protein [Haemophilus influenzae PittHH]
gi|145269082|gb|EDK09033.1| organic solvent tolerance protein [Haemophilus influenzae PittHH]
Length = 619
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 348/651 (53%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INAT++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYTWL-----QKILFEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE + + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----YRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H+ LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIVERQHDKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ +L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPILRLTES-AKVILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|449453437|ref|XP_004144464.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 738
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 246/700 (35%), Positives = 339/700 (48%), Gaps = 110/700 (15%)
Query: 365 SNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLT 424
+N + WS F W + + +FG S+R NQREI+NA MSG DV V+M GGGKSL
Sbjct: 63 TNSENWSG-SFKWDSEADDVKLNIFGISSYRANQREIVNAVMSGRDVLVIMAAGGGKSLC 121
Query: 425 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC 484
YQLPAL+ GI LV+SPL+SLIQDQ+M L I A+ L+ +++ I + L
Sbjct: 122 YQLPALLYDGIALVVSPLLSLIQDQVMGLAALGISASMLTSATSKEDEKLIYKNLEKGEG 181
Query: 485 KYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILK 544
K+LYVTPEKV+KS + +LE L+ I IDEAHC SQWGHDFRPDY+ LGILK
Sbjct: 182 SMKILYVTPEKVSKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILK 241
Query: 545 QKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLW-----------MDCE 593
+FPN PV+ALTATAT V+ D+V+ L + + F + NRPNL+ + +
Sbjct: 242 TQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVID 301
Query: 594 KVAERLQ-------VGLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQ 643
++AE +Q G+ Y F KE V+ E G A YH +D R V +
Sbjct: 302 QIAEFIQESYPNNESGIIYC--FSRKECEQVAKELRLRGISADHYHADMDSVAREKVHMR 359
Query: 644 WSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYS 703
WS + +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LYY
Sbjct: 360 WSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYYR 419
Query: 704 YSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRL 763
D R M+ NSG ENL +V YC++ CRR
Sbjct: 420 PGDVPRQSSMVF-----------------YENSG------LENLYGIVQYCQSRRQCRRS 456
Query: 764 LQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVF 823
+ HF E C T F+ T +V + + + FS + + F
Sbjct: 457 VFFRHFAEPLKD--CNGTSSPHFLKLVFVYWKGGTTPYFVVFFLFFSKENFSFNFDVLYF 514
Query: 824 RG---------SLNQYVKKHRHETLSLH----------GAGKHLAKSEASRILRHLVIED 864
S+ Q V+K + L G L K E +++ L+++
Sbjct: 515 IFLIGHARVIISILQDVQKSNQKMTMLQLVDKLKTKHNGLVSDLRKEEIEQLIIQLLLDR 574
Query: 865 FLMEEVK----KSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTP 920
L EE + ++ Y +V + A ++ G++ V + K VT
Sbjct: 575 VLKEEFQHTAYATNAYVTVGPL-------ARQVLQGKKVVKIEIS--------GKQKVTG 619
Query: 921 AKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGN 980
K S ++ PS + ++D LR L G G+ + +
Sbjct: 620 VK--------SKRKSVAPSGLECKLD------------KLRKELASIDG-GIFPHSVLST 658
Query: 981 ATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ LS + P + ++L + IGK K KYG R+LE IE
Sbjct: 659 QQIVVLSAQKPTSLDQLETM--IGKVKAEKYGDRILEEIE 696
>gi|392556563|ref|ZP_10303700.1| ATP-dependent DNA helicase [Pseudoalteromonas undina NCIMB 2128]
Length = 607
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 226/664 (34%), Positives = 337/664 (50%), Gaps = 97/664 (14%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+K E K+VFG FR Q +I+A ++G D VL+PTGGGKS+ YQ+PAL+ G+T+
Sbjct: 12 VRKPETVLKQVFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTI 71
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ K LLYV PEKV
Sbjct: 72 VISPLISLMQDQVTQLQALGVKAAYINNSLAREEQQLVYQQLHQGLIK--LLYVAPEKVL 129
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ + L R L LN ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTA
Sbjct: 130 QREFLER-LSHLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFTHVPMMALTA 184
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE---- 613
TA + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 185 TADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKSQ 239
Query: 614 ---FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFG
Sbjct: 240 SGIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFG 299
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+ + +
Sbjct: 300 MGINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFF-EDID 358
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
++ RFN M S+ E CRR + L +F E + +
Sbjct: 359 DEQRRRVEEQRFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQR 396
Query: 780 KTCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHR 835
+ C NC KSF D T A++ + V Q+F +I+E+ RG+ ++ +
Sbjct: 397 EPCGNCDICLNPPKSF---DGTLVAQQALSCVYRAQQRFGLGYIVELLRGANTSRIRDNN 453
Query: 836 HETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLII 895
H LS +G GK + ILR L+ + L +++
Sbjct: 454 HHELSTYGIGKDKSSEFWLSILRQLIHQGLLSQDIT------------------------ 489
Query: 896 GRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYS 955
Q LR A + S+ + A+ L + + D +Q N KL++
Sbjct: 490 --QGASLRLTEAARAILKSEYALQLAEPRLQAKHVY---QDKLAQ------FNYDKKLFA 538
Query: 956 SLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRL 1015
LR LR L + V Y +F + TL +++ +P + E L+++G+G K++KYG
Sbjct: 539 RLRALRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGEF 596
Query: 1016 LETI 1019
L I
Sbjct: 597 LTAI 600
>gi|317494839|ref|ZP_07953250.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917164|gb|EFV38512.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 612
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 217/652 (33%), Positives = 338/652 (51%), Gaps = 76/652 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA ++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIINAAIAGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +QQE+ S KLLY+ PE++ D L Q
Sbjct: 78 MKDQVDQLQANGVSAACLNSTQNREQQQEVYAGCRSG--AIKLLYIAPERLMM-DNFLDQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N LLA +DEAHC+SQWGHDFRP+Y LG++KQ+FP+ PV+ALTATA + +
Sbjct: 135 LPHWNP-SLLA---VDEAHCISQWGHDFRPEYSALGLIKQRFPDIPVIALTATADDATRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ + L L + ++ SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIERLLSLNDPLVQVSSFDRPNIRYTLIEKFKPLDQLIRFVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D R+ VQ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTTARLQSRGFSVGAYHAGLDHEHRSSVQDAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + VL Y +D ++ + E+ P
Sbjct: 311 FDIPRNIEAYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G+ E L M ++ E CRRL+ L +FGE +++C NC
Sbjct: 357 ---EGQQKEIERHKLNAMNAFAEAQT-CRRLVLLNYFGEGR-----QESCGNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D + A+K + + GQ+F +++E+ RG+ N +++ H+ L ++G G+
Sbjct: 408 KRYDGLEDAQKALSAIARVGQRFGIGYVVEILRGANNTRIREFGHDKLKVYGLGRDHTTE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ + + + ++ S L++ +S A ++ G + L P IN
Sbjct: 468 HWVSVLRQLIHLGLVTQNI-------AMHSALQLTES-ARPVLRGEVPLQLAVPRVIN-- 517
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
L + G N KL++ LR LR + E E
Sbjct: 518 -LKSRSSSSHASKNYGG-------------------NYDRKLFAKLRKLRKAIADE--EN 555
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++++P ELL ING+G+ K+ ++G + I +
Sbjct: 556 IPPYVVFNDATLLEMAEQMPIRASELLSINGVGQRKLDRFGAPFMTLIREHV 607
>gi|429091857|ref|ZP_19154510.1| ATP-dependent DNA helicase RecQ [Cronobacter dublinensis 1210]
gi|429099036|ref|ZP_19161142.1| ATP-dependent DNA helicase RecQ [Cronobacter dublinensis 582]
gi|426285376|emb|CCJ87255.1| ATP-dependent DNA helicase RecQ [Cronobacter dublinensis 582]
gi|426743518|emb|CCJ80623.1| ATP-dependent DNA helicase RecQ [Cronobacter dublinensis 1210]
Length = 609
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 342/651 (52%), Gaps = 78/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+A + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ S + +LLY+ PE++ D +
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRSG--QVRLLYIAPERLMM-DNFIDS 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N LA + +DEAHC+SQWGHDFRP+Y LG L+ +FP P +ALTATA + +
Sbjct: 135 LSYWN----LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLEDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE----EKAP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A C CD C +
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPR 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ ++
Sbjct: 409 RYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++R L+ +M+ + + S L++ ++ A + G ++L P + + K
Sbjct: 469 WVSVIRQLIHLGVVMQNIAQ-------HSALQLTEA-ARPFLRGEAPLMLAVPR-VAALK 519
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 520 -------------------------PRVAQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L ING+G K+ ++G + I +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIREHV 603
>gi|269964536|ref|ZP_06178775.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus 40B]
gi|269830663|gb|EEZ84883.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus 40B]
Length = 640
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 344/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 52 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 111
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ M E + +++ + K L+YV+PE+V D + R LE
Sbjct: 112 DQVDQLKANGVAAECINSTMPREELLSVYNRMHTGHLK--LVYVSPERVLMRDFIER-LE 168
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D+
Sbjct: 169 NLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRDI 224
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 225 LERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEMV 284
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 285 TEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 344
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 345 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE-----------------K 387
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 388 DDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPKH 441
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 442 F---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHSH 498
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 499 DYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDTA 550
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD +K N KL++ LR LR + E +
Sbjct: 551 ARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE--D 583
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 584 GLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 636
>gi|288937759|ref|YP_003441818.1| ATP-dependent DNA helicase RecQ [Klebsiella variicola At-22]
gi|288892468|gb|ADC60786.1| ATP-dependent DNA helicase RecQ [Klebsiella variicola At-22]
Length = 608
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 337/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QVRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPKIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKEFMALIRAHV 603
>gi|417840674|ref|ZP_12486783.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M19501]
gi|341950862|gb|EGT77444.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M19501]
Length = 615
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 224/652 (34%), Positives = 347/652 (53%), Gaps = 83/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFEGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + +A IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSKVSFIA---IDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATRQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILSHLNLENPHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
SL C G AA YH ++ A+R VQ+ + +D + ++ AT+AFGMGINK +VRFV
Sbjct: 254 RIAESL-CNKGVSAAAYHAGMETARRDRVQQDFQRDNVQVVVATIAFGMGINKSNVRFVA 312
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN-- 729
H LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP
Sbjct: 313 HFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIE 367
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
+ + G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 368 QHKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTVCNNCDICL 407
Query: 790 SFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+K D A+K++ + GQ F + +++ V RG NQ + + +H+ LS++G GK
Sbjct: 408 DPPKKYDGLVDAQKVMSAIYRVGQCFGAHYVIAVLRGMQNQKIIERQHDKLSVYGIGKDK 467
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+K ++R L+ F+ + V ++ L++ +S A ++ G + + L P
Sbjct: 468 SKEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEELELAMPRIS 520
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ +K+ + PQ + N L++ LR LR + +
Sbjct: 521 SISKIVHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK- 555
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P E+L+ING+G K+ ++G ++ I+
Sbjct: 556 -ENIPPYIVFNDATLQEMAQYMPTNNIEMLQINGVGSIKLERFGQPFIKLIQ 606
>gi|423123017|ref|ZP_17110701.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5246]
gi|376391770|gb|EHT04440.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5246]
Length = 608
Score = 340 bits (871), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 214/653 (32%), Positives = 337/653 (51%), Gaps = 82/653 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+ + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIDTALGGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QIRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LSHWN----LAMVAVDEAHCISQWGHDFRPEYAALGQLRQRVPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E T CRRL+ L +FGE A C CD C +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGRQEA-C-GNCDIC--LDP 406
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
+ D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 407 PKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIREMAHDKLPVYGIGREQSH 466
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 467 EHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVAL 518
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
P Q N KL++ LR LR + E E
Sbjct: 519 --------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE--E 550
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + I
Sbjct: 551 NIPPYVVFNDATLIEMAEQSPITAGEMLSVNGVGTRKLERFGKEFMALIRAHI 603
>gi|359437026|ref|ZP_09227101.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
gi|358028285|dbj|GAA63350.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
Length = 607
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 229/669 (34%), Positives = 337/669 (50%), Gaps = 107/669 (15%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+K E K+VFG FR Q +I+A ++G D VL+PTGGGKS+ YQ+PAL+ G+T+
Sbjct: 12 VRKPETVLKQVFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTI 71
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL+SL+QDQ+ L + A +++ ++ E+Q + ++L+ K LLYV PEKV
Sbjct: 72 VISPLISLMQDQVAQLQALGVKAAYINNSLAREERQLVYQQLHQGLIK--LLYVAPEKVL 129
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ D L R L LN ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTA
Sbjct: 130 QHDFLER-LSHLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMMALTA 184
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE---- 613
TA + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 185 TADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKNQ 239
Query: 614 ---FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFG
Sbjct: 240 SGIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFG 299
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+
Sbjct: 300 MGINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDD 359
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
EQ RFN M S+ E CRR + L +F E + +
Sbjct: 360 EQRRRVE-EQRFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQR 396
Query: 780 KTCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHR 835
+ C NC KSF D T A++ + V Q+F +I+E+ RG+ ++ +
Sbjct: 397 EPCGNCDICLNPPKSF---DGTLVAQQALSCVYRAQQRFGLGYIVELLRGANTSRIRDNN 453
Query: 836 HETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLII 895
H LS +G GK + ILR L+ + L +++
Sbjct: 454 HHELSTYGIGKDKSSEFWLSILRQLIHQGLLSQDIT------------------------ 489
Query: 896 GRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSG----KLSPSRNDTPSQPQNEV-DLNLS 950
Q LR +T A ++L G +L+ R Q+++ N
Sbjct: 490 --QGASLR--------------LTEAARAILKGEYALQLAEPRLQAKHVYQDKLAQFNYD 533
Query: 951 AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
KL++ LR LR L + V Y +F + TL +++ +P + E L+++G+G K++K
Sbjct: 534 KKLFARLRALRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNK 591
Query: 1011 YGVRLLETI 1019
YG L I
Sbjct: 592 YGGEFLTAI 600
>gi|406983517|gb|EKE04701.1| hypothetical protein ACD_20C00021G0003 [uncultured bacterium]
Length = 608
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 348/651 (53%), Gaps = 79/651 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
+FG FR Q EII+ ++G+D +LMPTGGGKSL YQ+PAL PG+T+V+SPL++L+Q
Sbjct: 16 IFGYEHFRNQQAEIIDHIINGNDALILMPTGGGKSLCYQIPALCLPGVTIVVSPLIALMQ 75
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L Q I A+ L+ + E E+ ++ + + ++YV+PE++ ++ L +E
Sbjct: 76 DQVESLKQLGISASVLNSTLSARESSEVEEKMRNG--ELDIIYVSPERL-NTESFLNNIE 132
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
LA IDEAHCVSQWGHDFRP+Y LK +FP+ P +ALTATA ++D+
Sbjct: 133 QCE----LALFAIDEAHCVSQWGHDFRPEYLEFSNLKNRFPHVPRIALTATADELTRQDI 188
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSY---------GHFFLLKEFYVV 617
++ LGL N F SF+RPN+ + K E+ Q+ L++ G + + V+
Sbjct: 189 IKHLGLENGRTFISSFDRPNIRYRIMTKDNEKKQL-LNFLNEEHKGDSGIVYCISRDKVM 247
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+ E G+ A YH ++ +R Q ++ KD+ ++ AT+AFGMGINKPDVRFV H
Sbjct: 248 EIAKYLKENGYDALPYHAGLNKDKRMKNQDRFIKDDGVVMVATIAFGMGINKPDVRFVAH 307
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI--SQGVAEQSPFTPGHNR 730
LPKS+E Y+QE GRAGRDG S + Y D ++++ I S+ AE
Sbjct: 308 LDLPKSVESYYQETGRAGRDGLPSDAWMVYGIEDIVKLQQFIIRSKANAEH--------- 358
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIK 789
++LE + L ++ Y E V CRR + L +FGEK ++ C + CD C IK
Sbjct: 359 -------KMLE--YQKLDALLGYVET-VKCRRQVLLEYFGEKTENKSC-ENCDTCLYPIK 407
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+F D T +K + + T Q F +H++ V G ++ VK+ H LS G GK
Sbjct: 408 TF---DGTIAVQKALSCIYRTDQMFGVTHLINVLLGKEDEKVKRFNHNKLSTFGIGKEYD 464
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
KS+ + R ++ + +++ YGSV L N +K ++ G + + LR
Sbjct: 465 KSQWKSVFRQIIASRVAIVDMES---YGSVK--LTANSNK---ILRGEEKIYLRSDVMDR 516
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K +K + +GK S +N ++E L+ LR R L KE
Sbjct: 517 QSKKTKKEA--------AGKRSVLKN-----AEDE-------SLFQKLRAYRLSLAKE-- 554
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+G+ + IF ++TL + + P EL I+G+GK K+ +YG LE I+
Sbjct: 555 QGIPPFVIFHDSTLIEMVNKKPENLVELSGISGVGKNKLERYGSSFLEIIK 605
>gi|419801388|ref|ZP_14326616.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK262]
gi|419845355|ref|ZP_14368628.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK2019]
gi|385193739|gb|EIF41095.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK262]
gi|386415831|gb|EIJ30351.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK2019]
Length = 618
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 222/650 (34%), Positives = 342/650 (52%), Gaps = 80/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q E+I+A +SG D V+M TG GKSL YQ+PAL PG+TLVISPL+SL
Sbjct: 20 RSVFGYQSFRKGQEEVIHAALSGQDALVVMATGNGKSLCYQIPALCFPGLTLVISPLISL 79
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV +
Sbjct: 80 MKDQVDQLQANGIEADFLNSSQTPEQQQQVENKLISG--QLKLLYVSPEKVMTNSFF--- 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + ++ I IDEAHC+SQWGHDFRP+Y LG LK FPN P++ALTATA + ++
Sbjct: 135 --QLISYAQISFIAIDEAHCISQWGHDFRPEYTQLGGLKAAFPNAPIMALTATADYATRQ 192
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 193 DILTHLKLDNPHKYIGSFDRPNIRYTLEEKFKPMEQLTRFVLAQKGKSGIVYCNSRSKVE 252
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 253 RIAEILRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 312
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 313 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIEQ 367
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C NC
Sbjct: 368 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCQNCDICLD 407
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F +++ V RG NQ + + +H+ LS++G GK +
Sbjct: 408 PPKKYDGLIDAQKVMSTIYRVGQCFGVQYVIAVLRGMHNQKIVERQHDKLSVYGIGKDKS 467
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + + + + S+ L++ +S A ++ G + L P +
Sbjct: 468 KEHWQSVIRQLIHLGFIQQVLGEFN-----SATLQLTES-ARPVLKGEVPLELAMPRISS 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
K+ + S +T + N L++ LR LR L +
Sbjct: 522 VNKIVHT----------------SHKNTVA--------NYDKDLFARLRFLRKQLADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGAIKLERFGQPFMALI 605
>gi|237727934|ref|ZP_04558415.1| ATP-dependent DNA helicase RecQ [Citrobacter sp. 30_2]
gi|226910383|gb|EEH96301.1| ATP-dependent DNA helicase RecQ [Citrobacter sp. 30_2]
Length = 609
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 218/663 (32%), Positives = 348/663 (52%), Gaps = 88/663 (13%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LEMGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ S + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G A YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++L+ L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRELAHDKLPVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + V Q+ AH+
Sbjct: 459 GIGREQSHEHWVSVIRQLI-------------------HLGLVTQNIAHH---------- 489
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR--NDTPSQPQNEVDLNLSAKLYSSLRML 960
SA+ T+ ++ P ++ +L+ R P Q N KL++ LR L
Sbjct: 490 ---SALQLTEAAR----PVLRGDVALQLAVPRIVALKPRAMQKSFGGNYDRKLFAKLRKL 542
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I
Sbjct: 543 RKAIADE--ENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIR 600
Query: 1021 STI 1023
+ +
Sbjct: 601 AHV 603
>gi|89052934|ref|YP_508385.1| ATP-dependent DNA helicase RecQ [Jannaschia sp. CCS1]
gi|88862483|gb|ABD53360.1| ATP-dependent DNA helicase RecQ [Jannaschia sp. CCS1]
Length = 685
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 216/688 (31%), Positives = 340/688 (49%), Gaps = 81/688 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG +FRP Q EI+ A SG DV +MPTGGGKSL +QLPAL+ G+T+VISPL++L
Sbjct: 13 KSTFGFDAFRPGQAEIVEAVASGKDVLAIMPTGGGKSLCFQLPALVRDGVTVVISPLIAL 72
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L +A + A L+ E + L KLLY+ PE++A +
Sbjct: 73 MRDQVRGLREAGVEAGALTSGNTPEETDAVWEGLERG--TLKLLYLAPERLASTGT---- 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E + AR ++ I +DEAHCVSQWGHDFRPDY LG L++ N P+ A TATA A +
Sbjct: 127 -ERMLARAGVSMIAVDEAHCVSQWGHDFRPDYLRLGALRRAL-NVPLAAFTATADAETRA 184
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCE------------KVAERLQVGLSYGHFFLLKE 613
++ + L +F F+RPNL + E A + Q G+ Y E
Sbjct: 185 EICERLFEDPPEVFLHGFDRPNLTLAFEVKNQPRQQILSFAAARKGQSGIVYCGTRAKTE 244
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+L + GH A YHG ++ R V+ ++++++ I+CATVAFGMG++KPD+R+V H
Sbjct: 245 TLAKALRDEGHSACHYHGGMEADDRRIVETRFNREDGLIVCATVAFGMGVDKPDIRWVAH 304
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LPKSIEGY+QE GRAGRDG + + Y D + + +G+A T H R N
Sbjct: 305 ADLPKSIEGYYQEIGRAGRDGAPADTLTLYGPDDIRFRRQQVDEGLAPPERKTADHARLN 364
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
++ E CRR + L +FG D A CD C++
Sbjct: 365 A----------------LLGLAEAQ-GCRRKVLLSYFG---DEAEDCGNCDLCARPPELF 404
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ V +K + ++ TG+ F + H+++V G+ N+ +++ H+ LS +G G K
Sbjct: 405 DASV--AVQKALSVMLRTGEYFGAGHLIDVLLGAQNEKIRQRGHDRLSTYGIGTEFDKRG 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ R ++ D + + ++ + + A ++ G + + LR
Sbjct: 463 WQAVFRQMMGRDLVRPDPERHGAFRMTDA--------ARPILRGEEGITLR------KDT 508
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+SK+ PA L+S + +P L S+L+ R L ++A V
Sbjct: 509 ISKAPRRPAVKMLVSEEDAP--------------------LMSALKAKRRALAEDA--RV 546
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKN 1032
AY IF + TL ++++ P T +++ I+G+G K+ +YG L+ I E +
Sbjct: 547 PAYVIFTDKTLIEMAEKRPDTLDDMARISGVGATKLERYGTAFLQVITGDTPEAVHPARR 606
Query: 1033 GSSSNDSNDSGKRRRDENEAPNANKGDD 1060
+ D+ D R + + + +GDD
Sbjct: 607 ALAGRDAGDVFDRLMEVQQ--DLMRGDD 632
>gi|399033938|ref|ZP_10732419.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398067770|gb|EJL59249.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 703
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 229/681 (33%), Positives = 348/681 (51%), Gaps = 95/681 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L A K+ FG FRPNQ IIN +SG D +MPTGGGKS+ +QLPAL+ PGIT+VIS
Sbjct: 6 LHAKLKENFGFEKFRPNQETIINTILSGQDTLAIMPTGGGKSICFQLPALVLPGITIVIS 65
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L++DQ+ L I A +++ + EQQ + L S+ +KL+Y+ PE ++ D
Sbjct: 66 PLIALMKDQVDSLKANGISACYINSSQSSEEQQFYIENLKSN--TFKLVYIAPESLSYLD 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
V+ +L ++ I IDEAHC+S WGHDFRP Y LG LK +FP+TP+LALTATA
Sbjct: 124 VIFNELT-------ISLIAIDEAHCISSWGHDFRPAYTNLGYLKSRFPSTPILALTATAD 176
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLK 612
+ + D+ + L L N F SF+R NL ++ +R++ + + G + L
Sbjct: 177 KATRTDITKQLNLKNPKTFVASFDRKNLSLEVRPALDRVKQIIDFVENKPNESGIIYCLS 236
Query: 613 EFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
L + G A YH ++ RA Q ++ D+ ++CAT+AFGMGI+K +V
Sbjct: 237 RKTTEELAEKLQKSGITAKAYHAGLENKLRAKTQDEFINDDCQVVCATIAFGMGIDKSNV 296
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
R+VIH++LPK+IEGY+QE GRAGRDG + VL+ SY+D I+++ S+G+
Sbjct: 297 RWVIHYNLPKNIEGYYQEIGRAGRDGLPAETVLFESYADVIQLQKFASEGL--------- 347
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
NS + L RM Y + + CRR + L +FGE + +C CD C K
Sbjct: 348 -------NS----DVQLAKLDRMKQYADA-LSCRRKILLSYFGE-LVTENC-GNCDICKK 393
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
F D T A+K + + + + I++ RGS N Y+ + ++ L +G G
Sbjct: 394 PPVFF--DGTILAQKALSAITRLQESEPLAVIVDFLRGSKNAYIYEKNYQDLKTYGIGAD 451
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
++ + ++ L L+ + Y ++ HN I+
Sbjct: 452 ISWYDWNQYLIQLI-----------NLGYCEIA-------FHQHNKIL------------ 481
Query: 908 INSTKLSKSDVTP-AKGSLLSG-KLSPSRNDTPSQPQNEV-DLNLSAKLYSSLRMLRTLL 964
+TP AK L G K+ + +NE+ + A S LR L
Sbjct: 482 ----------LTPFAKKVLFEGEKVKLTTVIKKVIDKNEIKEAKAKATKNSLFETLRKLR 531
Query: 965 VKEAGEG-VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ A E V AY IF +A L+ + P ++EE L I+G+GKAK+ KYG + + I
Sbjct: 532 YEIALEDEVPAYVIFSDAALRQMETLRPMSDEEFLAIDGVGKAKLEKYGSEFI----NAI 587
Query: 1024 KEFYKTDKNGSSSNDSNDSGK 1044
EF K+ K + + + + K
Sbjct: 588 IEFQKSKKTNTKAKKESSTYK 608
>gi|148827918|ref|YP_001292671.1| frataxin-like protein [Haemophilus influenzae PittGG]
gi|148719160|gb|ABR00288.1| frataxin-like protein [Haemophilus influenzae PittGG]
Length = 619
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 224/651 (34%), Positives = 346/651 (53%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INAT++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLAQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILFEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|365103530|ref|ZP_09333396.1| ATP-dependent DNA helicase recQ [Citrobacter freundii 4_7_47CFAA]
gi|363645202|gb|EHL84473.1| ATP-dependent DNA helicase recQ [Citrobacter freundii 4_7_47CFAA]
Length = 604
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 218/663 (32%), Positives = 348/663 (52%), Gaps = 88/663 (13%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 4 LEMGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 63
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ S + +LLY+ PE++
Sbjct: 64 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSG--QIRLLYIAPERL 121
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 122 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALT 176
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 177 ATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 236
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G A YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 237 YCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMGIN 296
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 297 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 351
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++L+ L M ++ E CRRL+ L +FGE ++ C
Sbjct: 352 ------------AGQLLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 393
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++
Sbjct: 394 NCDICLDPPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRELAHDKLPVY 453
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + V Q+ AH+
Sbjct: 454 GIGREQSHEHWVSVIRQLI-------------------HLGLVTQNIAHH---------- 484
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR--NDTPSQPQNEVDLNLSAKLYSSLRML 960
SA+ T+ ++ P ++ +L+ R P Q N KL++ LR L
Sbjct: 485 ---SALQLTEAAR----PVLRGDVALQLAVPRIVALKPRAMQKSFGGNYDRKLFAKLRKL 537
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I
Sbjct: 538 RKAIADE--ENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIR 595
Query: 1021 STI 1023
+ +
Sbjct: 596 AHV 598
>gi|411011638|ref|ZP_11387967.1| ATP-dependent DNA helicase RecQ [Aeromonas aquariorum AAK1]
Length = 611
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 223/648 (34%), Positives = 336/648 (51%), Gaps = 77/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q EII ++G D VL PTGGGKSL YQ+PAL+ PG+ +V+SPL+SL
Sbjct: 21 QAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCYQIPALLRPGLGVVVSPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ + E + + + K++YV+PE++ + + + R
Sbjct: 81 MKDQVDTLRANGVAAVYINSALSREEMIQNFAAMRRG--EIKIVYVSPERLLQHEFMDRL 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E L IDEAHCVSQWGHDFRP+Y LG LKQ FP PV+ALTATA + +
Sbjct: 139 AELP-----LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRS 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGLSYGHFFLLKE 613
D++ L L + I SF+RPN+ ++ K AE+L G+ Y E
Sbjct: 194 DMLHRLELNDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KAA YH + R Q+ + KD+I I+ ATVAFGMGI+KP+VRFV+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLELRQQTQEAFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK+IE Y+QE GRAGRDG + +L Y +D RV+ ++ N
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD----------------N 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ N + L+ L M ++ E CRR + L +FGE D K C NC +
Sbjct: 358 IENPQQ-LQVEQYKLNVMAAFAEAQT-CRRQVLLNYFGEYND-----KPCGNCDICLDPP 410
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A+K + V GQ F +++EV RGSLNQ +K H H+ LS +G GK +
Sbjct: 411 QSYDGTEDAQKALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQSHE 470
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ + L + + + N+VL+ A +
Sbjct: 471 YWMSVIRQLIHKGLLTQNITR--------------------------NLVLQLTEA--AR 502
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ + +V K L +L P + + + N +L+ LR LR + ++ E
Sbjct: 503 PVLRGEV---KLELAVPRLQPISSRKEKRNGLLDNANYDKRLFKELRALRKQIAED--EE 557
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V Y +F +ATL +++ +P TE+E+L ING+G K+ ++G ++ I
Sbjct: 558 VPPYVVFNDATLVEMAQLMPMTEDEMLAINGVGHRKLERFGEAFMDLI 605
>gi|336317637|ref|ZP_08572488.1| ATP-dependent DNA helicase RecQ [Rheinheimera sp. A13L]
gi|335877984|gb|EGM75932.1| ATP-dependent DNA helicase RecQ [Rheinheimera sp. A13L]
Length = 599
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 336/651 (51%), Gaps = 85/651 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG FR Q E+I A +SG D FVLMPTGGGKSL YQLPAL+ P +T+V+SPL+SL
Sbjct: 10 KQAFGYSQFRHGQLEVIQACLSGQDTFVLMPTGGGKSLCYQLPALMLPYVTVVVSPLMSL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A F++ + E Q+++R L + + KLLY+ PE++ ++D + R
Sbjct: 70 MKDQVDALQANGIAAEFINSSQSREEIQDVIRRLRNQ--QLKLLYLAPERLLQADFMSRL 127
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E ++ IDEAHC+SQWGHDFRP Y L LK FP+ P++ALTATA + ++
Sbjct: 128 AEV-----GVSLFAIDEAHCISQWGHDFRPHYTELAQLKHYFPHVPMMALTATADPATQK 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSLEC---- 621
D+ + L L I SF+RPN+ ++ L+ ++Y L+E + C
Sbjct: 183 DISRQLNLQQPYISVGSFDRPNIRYTVQEKFRPLEQVVNY---LKLQEQQSGIIYCASRR 239
Query: 622 ------------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
G + A YH + QR VQ+ + KD+I +I ATVAFGMG+NK ++RF
Sbjct: 240 KVDELTEQLAGKGFQVAAYHAGLTNEQRNSVQEAFKKDQIQLIIATVAFGMGVNKSNIRF 299
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH LP++IE Y+QE GRAGRDG + ++ +D R++ I +
Sbjct: 300 VIHFELPRTIEAYYQETGRAGRDGVPAEALMLVDPADIARMRSWIEKD------------ 347
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-I 788
N+ R E + +M ++ + CRRL+ L +FGE +K C NC I
Sbjct: 348 ----ENNSRT-EVALQRFNQMAAFAQAQT-CRRLVLLNYFGES-----SQKPCGNCDICI 396
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+ D T+ A+K + V Q F +H+++V RGS + + H+ LS + GK
Sbjct: 397 DPPKQFDATELARKALSCVYRVNQSFGMNHVIDVLRGSQTSRIHELGHDKLSTYAIGKDQ 456
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ILR LV L +++ S SVLK+ Q A ++ Q + L P +
Sbjct: 457 SHDYWLSILRQLVHCGLLQQDI-------SQHSVLKL-QEAARAVLRAEQTLQLAVPRLV 508
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
TK S S T A PQ N KL++ L++LR + +
Sbjct: 509 Q-TKASSSSKTTA-------------------PQ-----NYDRKLFARLKVLRKAIAER- 542
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ V + +F +ATL +++ P E L I+G+G+ K+ +YG L+ I
Sbjct: 543 -DDVPPFVVFSDATLIEMAQACPTNSVEFLAISGVGQTKLGRYGADFLDLI 592
>gi|440748399|ref|ZP_20927652.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
gi|436483223|gb|ELP39291.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
Length = 725
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 226/658 (34%), Positives = 355/658 (53%), Gaps = 82/658 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK+FG ++FR NQ I+ + G + FV+MPTG GKSL YQ PA++ G +VISPL++L
Sbjct: 10 KKIFGFNNFRGNQEPIVGNVLIGRNTFVIMPTGAGKSLCYQFPAVVSEGTAIVISPLIAL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD--VLL 503
+++Q+ L + A FL+ + +E ++ +E+ S K KLLYV PE + K + L
Sbjct: 70 MKNQVDQLNAFGVNAYFLNSTLNKSEITKVKKEVLSG--KTKLLYVAPESLTKDENIAFL 127
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL-GILKQKFPNTPVLALTATATAS 562
++ + L+ + IDEAHC+S+WGHDFRP+Y+ + I+ Q P P++ALTATAT
Sbjct: 128 KEAK-------LSFVAIDEAHCISEWGHDFRPEYRKIKSIIGQIGPELPIVALTATATPK 180
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVA-ERLQVGLSY--------GHFFLLK 612
V++D+ + L + IF+ SFNRPNL+ + KV E + + Y G + L
Sbjct: 181 VQQDIQRNLQMEEADIFKSSFNRPNLFYEVRPKVKNETKKAIIKYIKSQKGKSGIIYCLS 240
Query: 613 EFYVVSLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + G AA YH +D A R Q + +EI++I AT+AFGMGI+KPDV
Sbjct: 241 RKKVEEIAELLKVNGISAAPYHAGLDQAVRIKNQDDFLNEEIDVIVATIAFGMGIDKPDV 300
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
R+VIH+ +PKS+EGY+QE GRAGRDG C+++Y Y D I+++ + P T
Sbjct: 301 RYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYRYDDIIKLEKF-----NKDKPVTER 355
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
N +VL L M +Y E+ + CRR + L +FGE + C CDNC K
Sbjct: 356 EN-------AKVL------LEEMAAYAESSM-CRRRVLLHYFGEMLEE-DC-GYCDNCKK 399
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
E D ++ VK T +F+ +HI+ V RG N+Y+ + H+ S+ G G
Sbjct: 400 PMEKFEG--LDHLITVITAVKETNNRFNLNHIVNVIRGERNEYIASYGHDQSSVFGKGIE 457
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+ I+R ++ +L ++++ YG V+KV++ K N L P +
Sbjct: 458 DDEKFWKTIVRQALVMGYLEKDIEN---YG----VIKVSE-KGENY--------LESPFS 501
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
++ +K D G ++ ++S S + +E KL+ L+ R + K
Sbjct: 502 VSFSK--DHDYEQEVGDSIAEEVSNS-----GKAYDE-------KLFELLKAERKRVAK- 546
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ + Y IF + +L+ ++ P T+EEL +ING+G KV+K+G L+ IE+ ++E
Sbjct: 547 -AKNLPPYVIFQDPSLEEMATVYPTTKEELAQINGVGMGKVAKFGASFLKLIETYVEE 603
>gi|283787504|ref|YP_003367369.1| ATP-dependent DNA helicase [Citrobacter rodentium ICC168]
gi|282950958|emb|CBG90635.1| ATP-dependent DNA helicase [Citrobacter rodentium ICC168]
Length = 609
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 216/661 (32%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ MSG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTVMSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ S K +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQLEVMAGCRSG--KIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N A + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----ALLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGLSAAAYHAGLENHVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC ++ D A+ + + Q+F +++EV RG+ NQ +++ H+ L ++
Sbjct: 399 NCDICLDPPKRYDGLKDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRELGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + A ++ G ++ L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQMTDA-ARPVLRGEASLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL+S LR LR
Sbjct: 511 AVPRIVAL--------------------------KPRVMQKSFGGNYDRKLFSKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|359446850|ref|ZP_09236489.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
gi|358039322|dbj|GAA72738.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
Length = 607
Score = 339 bits (870), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 229/669 (34%), Positives = 337/669 (50%), Gaps = 107/669 (15%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
+K E K+VFG FR Q +I+A ++G D VL+PTGGGKS+ YQ+PAL+ G+T+
Sbjct: 12 VRKPETVLKQVFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTI 71
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL+SL+QDQ+ L + A +++ ++ EQQ + ++L+ K LLYV PEKV
Sbjct: 72 VISPLISLMQDQVTQLQALGVKAAYINNSLAREEQQLVYQQLHQGLIK--LLYVAPEKVL 129
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
+ + L R L LN ++ IDEAHCVS WGHDFRP Y L LKQ+F + P++ALTA
Sbjct: 130 QREFLER-LSHLN----VSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFTHVPMMALTA 184
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE---- 613
TA + + D+V+ L L I SF+RPN+ E+ + + L Y LKE
Sbjct: 185 TADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRY-----LKEQKNQ 239
Query: 614 ---FYVVS-----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
Y S + G AA YH + QR FVQ +++D+I I+ ATVAFG
Sbjct: 240 SGIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFG 299
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINKP+VRFV+H+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RV+
Sbjct: 300 MGINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDD 359
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
EQ RFN M S+ E CRR + L +F E + +
Sbjct: 360 EQRRRVE-EQRFNA----------------MASFAEAQT-CRRQILLNYFSE-----YQR 396
Query: 780 KTCDNCSKI----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHR 835
+ C NC KSF D T A++ + V Q+F +I+E+ RG+ ++ +
Sbjct: 397 EPCGNCDICLNPPKSF---DGTLVAQQALSCVYRAQQRFGLGYIVELLRGANTSRIRDNN 453
Query: 836 HETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLII 895
H LS +G GK + ILR L+ + L +++
Sbjct: 454 HHELSTYGIGKDKSSEFWLSILRQLIHQGLLSQDIT------------------------ 489
Query: 896 GRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSG----KLSPSRNDTPSQPQNEV-DLNLS 950
Q LR +T A ++L G +L+ R Q+++ N
Sbjct: 490 --QGASLR--------------LTEAARAILKGEYALQLAEPRLQAKHVYQDKLAQFNYD 533
Query: 951 AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
KL++ LR LR L + V Y +F + TL +++ +P + E L+++G+G K++K
Sbjct: 534 KKLFARLRALRKELAD--ADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNK 591
Query: 1011 YGVRLLETI 1019
YG L I
Sbjct: 592 YGGEFLTAI 600
>gi|170729924|ref|YP_001775357.1| ATP-dependent DNA helicase [Xylella fastidiosa M12]
gi|167964717|gb|ACA11727.1| ATP-dependent DNA helicase [Xylella fastidiosa M12]
Length = 600
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 226/648 (34%), Positives = 345/648 (53%), Gaps = 77/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+ II +GHD VLMPTGGGKSL YQ+PAL+ GI +VISPL++L
Sbjct: 12 QRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPALLRKGIGVVISPLIAL 71
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ T+ Q I L + LLY+ PE++ + L
Sbjct: 72 MQDQVETLRQLGVRAAYLNSTLDATQAQRIEHALVT--ADLDLLYIAPERLLTAHFL--- 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P+ P +ALTATA +
Sbjct: 127 --SLLERSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHVPRIALTATADPPTQR 184
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKE 613
++ + L L + F SF+RPN+ + +K R Q+ G+ Y K
Sbjct: 185 EIAERLDLSDAHHFISSFDRPNIRYTVVQKNNMRRQLQEFLSRHRNTAGIVYA-MSRRKT 243
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ + C G+ A YH + RA Q+ + ++E ++CAT+AFGMGINKPDVRFV
Sbjct: 244 EEIAAYLCTQGYNALPYHAGLPAETRAKHQRCFLREEGIVMCATIAFGMGINKPDVRFVA 303
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKS+EGY+QE GRAGRDG+ + + YS D + +K MI Q A ++ R
Sbjct: 304 HIDLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSEASEA-------RK 356
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
V + L ++ YCE+ + CRR L L FGE + + C CDNC +
Sbjct: 357 CVERA---------KLDHLLGYCES-MQCRRQLLLSSFGETYPNP-CGN-CDNC--LTPA 402
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T ++K + V TGQ+F H++++ RGS +Q + + H+ LS +G G+ + +
Sbjct: 403 TAWDATVLSQKALSCVYRTGQRFGVGHLIDILRGSKSQRILQLGHDQLSTYGIGRDVDER 462
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ R L+ L EV ++ YG L++ S + ++ G + V++R I
Sbjct: 463 SWRSVFRQLIATHLL--EV-DNEGYGG----LRLTPS-SRPVLKGERQVMMRRDQFIRE- 513
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
D Q L L+++L LR L KE +
Sbjct: 514 -----------------------RDRTGQRHGLSVLPEDLGLFNALHRLRAQLAKE--QN 548
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V A+ IF ++TL+H++++ P L +I+GIG K+++YG +L+E +
Sbjct: 549 VPAFVIFHDSTLRHIAEQRPTNLNALSKISGIGSNKLTRYGHQLIELV 596
>gi|269962279|ref|ZP_06176631.1| ATP-dependent DNA helicase RecQ [Vibrio harveyi 1DA3]
gi|269832982|gb|EEZ87089.1| ATP-dependent DNA helicase RecQ [Vibrio harveyi 1DA3]
Length = 665
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 344/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 77 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 136
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ M E + +++ + K L+YV+PE+V D + R LE
Sbjct: 137 DQVDQLKANGVAAECINSTMPREELLSVYNRMHTGHLK--LVYVSPERVLMRDFIER-LE 193
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D+
Sbjct: 194 NLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRDI 249
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 250 LERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEMV 309
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 310 TEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 369
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 370 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE-----------------K 412
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 413 DDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPKH 466
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 467 F---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHSH 523
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 524 DYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDTA 575
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD +K N KL++ LR LR + E +
Sbjct: 576 ARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE--D 608
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 609 GLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 661
>gi|71274831|ref|ZP_00651119.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Xylella fastidiosa Dixon]
gi|71164563|gb|EAO14277.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Xylella fastidiosa Dixon]
gi|71730384|gb|EAO32466.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Xylella fastidiosa Ann-1]
Length = 645
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 226/648 (34%), Positives = 345/648 (53%), Gaps = 77/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+ II +GHD VLMPTGGGKSL YQ+PAL+ GI +VISPL++L
Sbjct: 57 QRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPALLRKGIGVVISPLIAL 116
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ T+ Q I L + LLY+ PE++ + L
Sbjct: 117 MQDQVETLRQLGVRAAYLNSTLDATQAQRIEHALVT--ADLDLLYIAPERLLTAHFL--- 171
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P+ P +ALTATA +
Sbjct: 172 --SLLERSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHVPRIALTATADPPTQR 229
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKE 613
++ + L L + F SF+RPN+ + +K R Q+ G+ Y K
Sbjct: 230 EIAERLDLSDAHHFISSFDRPNIRYTVVQKNNMRRQLQEFLSRHRNTAGIVYA-MSRRKT 288
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ + C G+ A YH + RA Q+ + ++E ++CAT+AFGMGINKPDVRFV
Sbjct: 289 EEIAAYLCTQGYNALPYHAGLPAETRAKHQRCFLREEGIVMCATIAFGMGINKPDVRFVA 348
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKS+EGY+QE GRAGRDG+ + + YS D + +K MI Q A ++ R
Sbjct: 349 HIDLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSEASEA-------RK 401
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
V + L ++ YCE+ + CRR L L FGE + + C CDNC +
Sbjct: 402 CVERA---------KLDHLLGYCES-MQCRRQLLLSSFGETYPNP-CGN-CDNC--LTPA 447
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T ++K + V TGQ+F H++++ RGS +Q + + H+ LS +G G+ + +
Sbjct: 448 TAWDATVLSQKALSCVYRTGQRFGVGHLIDILRGSKSQRILQLGHDQLSTYGIGRDVDER 507
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ R L+ L EV ++ YG L++ S + ++ G + V++R I
Sbjct: 508 SWRSVFRQLIATHLL--EV-DNEGYGG----LRLTPS-SRPVLKGERQVMMRRDQFIRE- 558
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
D Q L L+++L LR L KE +
Sbjct: 559 -----------------------RDRTGQRHGLSVLPEDLGLFNALHRLRAQLAKE--QN 593
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V A+ IF ++TL+H++++ P L +I+GIG K+++YG +L+E +
Sbjct: 594 VPAFVIFHDSTLRHIAEQRPTNLNALSKISGIGSNKLTRYGHQLIELV 641
>gi|145640806|ref|ZP_01796388.1| frataxin-like protein [Haemophilus influenzae R3021]
gi|145274320|gb|EDK14184.1| frataxin-like protein [Haemophilus influenzae 22.4-21]
Length = 619
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 347/651 (53%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K +FG SFR Q E+INAT++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSIFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYESADYAWL-----QKILLEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P +
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLRLTES-AKVILKGEEPLELAMPRISS 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPISNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|397162702|ref|ZP_10486172.1| ATP-dependent DNA helicase RecQ [Enterobacter radicincitans DSM
16656]
gi|396095746|gb|EJI93286.1| ATP-dependent DNA helicase RecQ [Enterobacter radicincitans DSM
16656]
Length = 608
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 211/656 (32%), Positives = 342/656 (52%), Gaps = 88/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q++II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQQDIIDTVLSGRDCLVVMPTGGGKSLCYQIPALVLQGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +Q +++ + + +LLY+ PE++ D L Q
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQFDVINGCRNG--QIRLLYIAPERLM-LDNFLDQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFRP+Y LG L+Q P+ P +ALTATA + +
Sbjct: 135 LRQWNP----VLLAVDEAHCISQWGHDFRPEYAALGHLRQMLPSVPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ + LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIERLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH +D RA VQ+Q+ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGFSAAAYHAGLDNELRARVQEQFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 406 PPRQYDGLQDAQKALSAIYRVNQRFGMGYVVEVLRGANNQRIREFGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS--A 907
++R L+ F + + + S L++ ++ A L+ G ++L P A
Sbjct: 466 HEHWVSVIRQLIHMGFATQNIAQ-------HSALQLTEA-ARPLLRGEVPLMLAVPRMVA 517
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ + K+ V N KL++ LR LR + E
Sbjct: 518 LKPKVMQKAAVG----------------------------NYDRKLFAKLRKLRKAIADE 549
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I + +
Sbjct: 550 --ENIPPYVVFNDATLIEMAEQMPLSPGEMLSVNGVGTRKLERFGQEFMALIRAHV 603
>gi|170064539|ref|XP_001867566.1| ATP-dependent DNA helicase Q1 [Culex quinquefasciatus]
gi|167881896|gb|EDS45279.1| ATP-dependent DNA helicase Q1 [Culex quinquefasciatus]
Length = 701
Score = 339 bits (869), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 294/540 (54%), Gaps = 54/540 (10%)
Query: 368 QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQL 427
Q W++ W+ + +VF FR Q IN +S HDV +L PTGGGKSL +QL
Sbjct: 62 QDWNAEGHAWSGTVRQVLGEVFRMADFRSQQLPAINGILSKHDVILLAPTGGGKSLCFQL 121
Query: 428 PALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYCKY 486
PAL+ GIT+V+SPL+SL++DQ+ L + + A +LS N++ + + L + D +
Sbjct: 122 PALVADGITVVVSPLISLMEDQVWALKKLGVKAEYLSANIDKDVVNNVNKLLRDGDTEQL 181
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
K++Y+TPE++AKS+ + L+ + LA+ IDE HC SQWGHD+RPDY+ L +LK+
Sbjct: 182 KIVYITPERMAKSNRFMSALQKCYNAKKLAQFAIDEVHCCSQWGHDYRPDYKLLAVLKKM 241
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-------DCEKVAERL 599
+P+ P+L +TATATA V DV + LGL C+IF FNRPNL+ D E++ + L
Sbjct: 242 YPDVPILGVTATATAKVLNDVQKMLGLRECLIFNAPFNRPNLYYHVLEKPSDKEELYDML 301
Query: 600 QVGLSYGHF---------FLLKEFYVVS---LECGHKAAFYHGSIDPAQRAFVQKQWSKD 647
L G + F +KE +S L+ K YH +D QR+ ++W +
Sbjct: 302 -AELMKGRYRNMSGIIYTFTVKETEEISTQLLQRDVKVIPYHAYLDAKQRSRTHQRWMSN 360
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
E+ + ATVAFGMGI+K DVRFVIHH++ KS+E ++QE GRAGRDG+R+ C+L Y + D
Sbjct: 361 EVQAVVATVAFGMGIDKADVRFVIHHTISKSMENFYQESGRAGRDGRRADCILLYRFMDL 420
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
R+ M Q S NL MV YC N DCRR L
Sbjct: 421 FRLSTMSFQEYEGLS-----------------------NLYSMVKYCINGKDCRRRLISR 457
Query: 768 HFGEKFDSAHCKKTCDNC---SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFR 824
HF E +D HC + CD C K+ + E+D+T L+ +++ + L++
Sbjct: 458 HFAEVWDDTHCNRMCDRCYHRDKV-TLPEQDITTHYNTLLAILRRAETLQTKLTALKLVD 516
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLK 884
++ K+R ET + + +++ L++ D+L EE + + Y ++S + K
Sbjct: 517 AWYHKGSPKNRLET-----PPPVMDRYIGEQLVAFLIVNDYLKEEF-QYNAYTTLSYIAK 570
>gi|15837982|ref|NP_298670.1| DNA helicase [Xylella fastidiosa 9a5c]
gi|9106386|gb|AAF84190.1|AE003969_7 DNA helicase [Xylella fastidiosa 9a5c]
Length = 645
Score = 339 bits (869), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 227/648 (35%), Positives = 344/648 (53%), Gaps = 77/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG +FR Q+ II +GHD VLMPTGGGKSL YQ+PAL+ GI +VISPL++L
Sbjct: 57 QRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPALLRKGIGVVISPLIAL 116
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A +L+ ++ T+ Q I L + LLY+ PE++ + L
Sbjct: 117 MQDQVETLRQLGVRAAYLNSTLDATQAQRIEHALVT--ADLDLLYIAPERLLTAHFL--- 171
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL R +A IDEAHCVSQWGHDFRP+Y+ L +L +++P+ P +ALTATA +
Sbjct: 172 --SLLERSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHVPRIALTATADPPTQR 229
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKE 613
++ + L L + F SF+RPN+ + +K R Q+ G+ Y K
Sbjct: 230 EIAERLDLSDAHHFISSFDRPNIRYTVVQKNNMRRQLQEFLGRHRNTAGIVYA-MSRRKT 288
Query: 614 FYVVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ + C G+ A YH + RA Q+ + ++E ++CAT+AFGMGINKPDVRFV
Sbjct: 289 EEIAAYLCTQGYNALPYHAGLPVETRAKHQRCFLREEGIVMCATIAFGMGINKPDVRFVA 348
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKS+EGY+QE GRAGRDG+ + + YS D + +K MI Q A ++ R
Sbjct: 349 HIDLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSEASEA-------RK 401
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
V + L ++ YCE+ + CRR L L FGE + + C CDNC +
Sbjct: 402 CVERA---------KLDHLLGYCES-MQCRRQLLLSSFGETYPNP-CGN-CDNC--LTPA 447
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T ++K + V TGQ+F H++++ RGS +Q + + H+ LS +G G + +
Sbjct: 448 TAWDATVLSQKALSCVYRTGQRFGVGHLIDILRGSKSQRILQLGHDQLSTYGIGSDVDER 507
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ R LV L EV ++ YG L++ S + ++ G + V++R I
Sbjct: 508 SWRSVFRQLVATHLL--EV-DNEGYGG----LRLTPS-SRPVLKGERQVMMRRDQFIRE- 558
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
D Q L L+++L LR L KE +
Sbjct: 559 -----------------------RDRTGQRHGLSVLPEDLALFNALHRLRAQLAKE--QN 593
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V A+ IF ++TL+H++++ P L +I+GIG K+++YG +L+E +
Sbjct: 594 VPAFVIFHDSTLRHIAEQRPTNLNALTKISGIGNNKLTRYGHQLIELV 641
>gi|229845776|ref|ZP_04465888.1| frataxin-like protein [Haemophilus influenzae 7P49H1]
gi|229810780|gb|EEP46497.1| frataxin-like protein [Haemophilus influenzae 7P49H1]
Length = 619
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 224/651 (34%), Positives = 346/651 (53%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INAT++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINATLNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILFEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVISVLRGMHNQKIIERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|365846070|ref|ZP_09386576.1| ATP-dependent DNA helicase RecQ [Yokenella regensburgei ATCC 43003]
gi|364574417|gb|EHM51877.1| ATP-dependent DNA helicase RecQ [Yokenella regensburgei ATCC 43003]
Length = 623
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 210/652 (32%), Positives = 341/652 (52%), Gaps = 80/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 32 QETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQIPALVLDGLTVVVSPLISL 91
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ + K +LLY+ PE++ D L
Sbjct: 92 MKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTG--KIRLLYIAPERLM-LDNFLDN 148
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + +
Sbjct: 149 LSHWNP----VMLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRL 204
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 205 DIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 264
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G A YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 265 DTAARLQSRGISAGAYHAGLENHIRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 324
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 325 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP--------- 370
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+G++L+ L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 371 ---AGQLLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPP 421
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D + A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 422 KQYDGLEDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRELGHDKLPVYGIGREKSHE 481
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F + + ++ S L++ ++ A ++ G + L P I
Sbjct: 482 HWVSVIRQLIHLGFATQNI-------ALHSALQLTEA-ARPVLRGDVPLALAVPRIIAL- 532
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
P Q N KL++ LR LR + E E
Sbjct: 533 -------------------------KPRVMQKAAVGNYDRKLFAKLRKLRKAIADE--EN 565
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++++P + ++L +NG+G K+ ++G + I S +
Sbjct: 566 IPPYVVFNDATLIEMAEQMPLSASDMLSVNGVGMRKLERFGKEFMALIRSHV 617
>gi|398793349|ref|ZP_10553767.1| ATP-dependent DNA helicase RecQ [Pantoea sp. YR343]
gi|398210961|gb|EJM97590.1| ATP-dependent DNA helicase RecQ [Pantoea sp. YR343]
Length = 608
Score = 338 bits (868), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 338/654 (51%), Gaps = 78/654 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ II +SG D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 QDTFGYQQFRPGQQNIIETALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQ++ + + K KLLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQTREQQQQVFADCRTG--KLKLLYIAPERLMM-DNFLDS 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFRP+Y +G L+Q FP+ PV+ALTATA + +
Sbjct: 135 LHQWNP----VMLAVDEAHCISQWGHDFRPEYGSIGQLRQHFPDLPVMALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIAHLLQMDDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH ID AQRA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGIDSAQRASVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ + + V
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKV-------------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE ++ CDNC
Sbjct: 357 ---PGPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QQQCDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + TGQ+F +I+EV RG+ NQ ++ + H+ L ++G G+ +
Sbjct: 408 RRYDGLLEAQKALSSIYRTGQRFGMGYIVEVLRGASNQRIRDNGHDKLPVYGLGREHSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ + + + ++ S L++ ++ A ++ ++L P +
Sbjct: 468 HWISVLRQLIHLGMVTQNI-------AMHSALQLTEA-ARPVLRAEVPLMLAVPRIVTVK 519
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
G SP + N +L++ LR LR + E E
Sbjct: 520 T--------------RGSSSPKVHSG----------NYDRQLFAKLRKLRKAIADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + E
Sbjct: 554 IPPYVVFNDATLIEMAEQMPISASEMLSVNGVGHRKLERFGKPFLVMIKEHVDE 607
>gi|121592519|ref|YP_984415.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. JS42]
gi|120604599|gb|ABM40339.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. JS42]
Length = 623
Score = 338 bits (868), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 221/652 (33%), Positives = 335/652 (51%), Gaps = 72/652 (11%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLV 443
VFG FR Q+ II+ ++G D VLMPTGGGKSL YQ+PA++ G+T+V+SPL+
Sbjct: 11 VFGYEQFRGPQQAIIDHVIAGGDALVLMPTGGGKSLCYQVPAIVRRDAGLGVTVVVSPLI 70
Query: 444 SLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
+L+ DQ+ L +A + A FL+ ++W + Q++ R L + LLY PE+V +D L
Sbjct: 71 ALMHDQVGALHEAGVEAAFLNSTLDWQQTQDVERRLARG--EITLLYAAPERV-TTDRFL 127
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
L+ L+AR L IDEAHCVSQWGHDFRP+Y+ L +L +++P P +ALTATA A
Sbjct: 128 TLLDGLHARGQLGLFAIDEAHCVSQWGHDFRPEYRALTLLHERYPQVPRIALTATADALT 187
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV------------GLSYGHFFL 610
+ED+++ L L + +F SF+RPN+ + EK Q+ G+ Y
Sbjct: 188 REDIIERLQLQDARLFISSFDRPNIRYTIVEKKDATTQLLRFIEREHSGEAGVVYCQSRK 247
Query: 611 LKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
E +L+ G A YH +D R Q ++ ++E ++ AT+AFGMGI+KPDVRF
Sbjct: 248 RVEELAATLQDAGINALPYHAGLDTKVRQNHQDRFLREEGIVMVATIAFGMGIDKPDVRF 307
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
V H +PK+IEGY+QE GRAGRDG + + Y D + + MI + +P
Sbjct: 308 VAHVDMPKNIEGYYQETGRAGRDGLNADAWMAYGLQDVVNQRRMIDE--------SPAGE 359
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
F G++ DCRR+ L +FGE S C CDNC
Sbjct: 360 EFKAVMRGKLDALLALA---------EATDCRRVRLLGYFGEA--SEPCGN-CDNCLNPP 407
Query: 790 SFIEKDVTDTAKKLVELV----KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
+ D TD A+KL+ + + +G F + HI+++ RG V++ HE LS G G
Sbjct: 408 AVW--DGTDAARKLLSTIYRVHEASGLTFGTGHIMDILRGKATDKVQQFGHEKLSTFGLG 465
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
++++ +LR L+ + + K G S + ++ G Q+V+LR
Sbjct: 466 AQYSEAQLRGVLRQLLAAGAV--GLHKVTTEGGHSFDTLALTEGSRPVLRGEQSVLLREA 523
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKL-YSSLRMLRTLL 964
+A +G P R P P +L A++ + +L+ R +
Sbjct: 524 TAA------------------AGPKKPRRASAP--PVAAANLGQDAQVRFINLKAWRAEV 563
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
+E + AY IF +ATL +++R P T E+L I+G+G K+ YG +L
Sbjct: 564 ARE--HNLPAYVIFHDATLAAIAERNPSTLEDLQGISGMGAKKLEAYGAEVL 613
>gi|317046403|ref|YP_004114051.1| ATP-dependent DNA helicase RecQ [Pantoea sp. At-9b]
gi|316948020|gb|ADU67495.1| ATP-dependent DNA helicase RecQ [Pantoea sp. At-9b]
Length = 607
Score = 338 bits (868), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 340/654 (51%), Gaps = 79/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ II ++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 QDTFGYQQFRPGQQTIIETALAGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ++ + S + KLLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQTREEQQQVFADCRSG--RLKLLYIAPERLMM-DNFLDS 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP PV+ALTATA + +
Sbjct: 135 LHHWNP----VMLAVDEAHCISQWGHDFRPEYGALGQLRQRFPELPVMALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIAHLLQMHDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH ID AQRA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGIDSAQRARVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLE----EKTP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE ++ CDNC
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QQQCDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + TGQ+F +I+EV RG+ N ++ + H+ L ++G G+ +
Sbjct: 408 RRYDGLVEAQKALSSIYRTGQRFGMGYIVEVLRGASNLRIRDNGHDKLPVYGIGRDNSTE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ + + + ++ S L++ ++ A ++ ++L P + T
Sbjct: 468 HWVSVLRQLIHLGMVTQNI-------AMHSALQLTEA-ARPVLRAEVPLMLAVPRIV--T 517
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
++S G N KL++ LR LR + E E
Sbjct: 518 VKTRSSSPKVYGG-----------------------NYDRKLFAKLRKLRKAIADE--EN 552
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + E
Sbjct: 553 IPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLVMIKEHLDE 606
>gi|424030704|ref|ZP_17770183.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-01]
gi|408881586|gb|EKM20462.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HENC-01]
Length = 611
Score = 338 bits (868), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 216/653 (33%), Positives = 344/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQEFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ M E + +++ + K L+YV+PE+V D + R LE
Sbjct: 83 DQVDQLKANGVAAECINSTMPREELLSVYNRMHTGHLK--LVYVSPERVLMRDFIER-LE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D+
Sbjct: 140 NLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 196 LERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCGSRKKVEMV 255
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 256 TEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 315
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y ++ ++ M+ +
Sbjct: 316 IPRNIESYYQETGRAGRDGLPAEAMMLYDPANISWLRRMLDE-----------------K 358
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 359 DDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 413 F---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 470 DYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KSD +K N KL++ LR LR + E +
Sbjct: 522 ARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSIADE--D 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 555 GLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|117621322|ref|YP_858553.1| ATP-dependent DNA helicase RecQ [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562729|gb|ABK39677.1| ATP-dependent DNA helicase RecQ [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 611
Score = 338 bits (868), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 335/648 (51%), Gaps = 77/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FRP Q EII ++G D VL PTGGGKSL YQ+PAL+ PG+ +V+SPL+SL
Sbjct: 21 QAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCYQIPALLRPGLGVVVSPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +++ + E + + + K++YV+PE++ + + + R
Sbjct: 81 MKDQVDSLRANGVAAVYINSALSREEMIQNFAAMRRG--EIKIVYVSPERLLQHEFMDRL 138
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E L IDEAHCVSQWGHDFRP+Y LG LKQ FP PV+ALTATA + +
Sbjct: 139 AELP-----LGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPVVALTATADEATRS 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL---------QVGLSYGHFFLLKE 613
D++ L L + I SF+RPN+ ++ K AE+L G+ Y E
Sbjct: 194 DMLHRLELHDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGNCGIVYCSSRNRVE 253
Query: 614 FYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KAA YH + R Q+ + KD+I I+ ATVAFGMGI+KP+VRFV+H
Sbjct: 254 EVAERLSRHGCKAAPYHAGLPLELRQRTQESFLKDDIEIVVATVAFGMGIDKPNVRFVVH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PK+IE Y+QE GRAGRDG + +L Y +D RV+ ++ N
Sbjct: 314 YDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLD----------------N 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+ N + L+ L M ++ E CRR + L +FGE D K C NC +
Sbjct: 358 IENPQQ-LQVEQYKLNVMAAFAEAQT-CRRQVLLNYFGEYND-----KPCGNCDICLDPP 410
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A+K + V GQ F +++EV RGSLNQ +K H H+ LS +G GK +
Sbjct: 411 QSYDGTEDAQKALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQSHE 470
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ + L + + + N+VL+ A +
Sbjct: 471 YWMSVIRQLIHKGLLTQNITR--------------------------NLVLQLTEA--AR 502
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ + +V K L +L P + + + N +L+ LR LR + ++ E
Sbjct: 503 PVLRGEV---KLDLAVPRLQPISSRKEKRNGLLDNANYDKRLFKELRALRKQIAED--EE 557
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V Y +F +ATL +++ +P TE E+L +NG+G K+ ++G ++ I
Sbjct: 558 VPPYVVFNDATLVEMAQLMPMTEAEMLAVNGVGHRKLERFGEAFMDLI 605
>gi|440289627|ref|YP_007342392.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium strain
FGI 57]
gi|440049149|gb|AGB80207.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium strain
FGI 57]
Length = 609
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 210/656 (32%), Positives = 340/656 (51%), Gaps = 88/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+ + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQENIIDTVLEGRDCLVVMPTGGGKSLCYQIPALVLNGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+ + A ++ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLIANGVAAACINSTQSREQQQEVMAGCRSG--QIRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + +
Sbjct: 135 LAHWNP----VMLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G A YH +D A RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAGAYHAGLDNAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D + A+ + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLNDAQIALSTIYRVNQRFGMGYVVEVIRGANNQRIREFGHDKLKVYGMGREKS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS--A 907
++R L+ F + + + S L++ + A ++ G ++L P A
Sbjct: 466 HEHWVSVIRQLIHLGFATQNIAQ-------HSALQLTDA-ARPIVRGEIPLMLAVPRIVA 517
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ + K+ V N KL+S LR LR + E
Sbjct: 518 LKPRVMQKAAVG----------------------------NYDRKLFSKLRKLRKAIADE 549
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I + +
Sbjct: 550 --ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGTRKLERFGKEFMALIRAHV 603
>gi|398809293|ref|ZP_10568144.1| ATP-dependent DNA helicase RecQ [Variovorax sp. CF313]
gi|398086072|gb|EJL76709.1| ATP-dependent DNA helicase RecQ [Variovorax sp. CF313]
Length = 717
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 226/657 (34%), Positives = 340/657 (51%), Gaps = 72/657 (10%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPL 442
+VFG FR Q++I++ + G D VLMPTGGGKSL YQ+PA+ G+ +V+SPL
Sbjct: 110 EVFGYAQFRGAQQDIVDHVVGGGDALVLMPTGGGKSLCYQIPAIARQRAGHGVAVVVSPL 169
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
++L+ DQ+ L +A + A FL+ ++W E Q++ R + + LLY PE+V +
Sbjct: 170 IALMHDQVGALHEAGVSAAFLNSTLDWEETQDVERRMLRG--EITLLYAAPERV-NTPRF 226
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
L QL+SL R L+ IDEAHCVSQWGHDFRP+Y+ L +L +++ P +ALTATA
Sbjct: 227 LSQLDSLKERGKLSLFAIDEAHCVSQWGHDFRPEYRALTVLHERYAGVPRIALTATADNL 286
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV------------GLSYGHFF 609
+ D+V+ L L F SF+RPN+ + EK Q+ G+ Y
Sbjct: 287 TRADIVERLQLEEARQFVSSFDRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSR 346
Query: 610 LLKEFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E V L + G A YH +D A R Q ++ ++E ++ AT+AFGMGI+KPDVR
Sbjct: 347 KRVEDVAVMLRDAGINALPYHAGLDAAVRQKHQDRFLREEGIVMVATIAFGMGIDKPDVR 406
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV H +PK+IEGY+QE GRAGRDG + + Y D + + MI + +P
Sbjct: 407 FVGHLDMPKNIEGYYQETGRAGRDGGPADAWMTYGLQDVVNQRRMIDE--------SPAG 458
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
F +V+ + LL + DCRR+ L +FGEK S C CDNC
Sbjct: 459 EEFK-----QVMRGKLDALLSLAEAS----DCRRVRLLGYFGEK--STPC-GNCDNCLNP 506
Query: 789 KSFIEKDVTDTAKKLVELV----KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
D TD A+KL+ + +L+G F + HI+++ RG + VK+ HE +S G
Sbjct: 507 PQVW--DGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGKPTEKVKQFGHERISTFGI 564
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G ++ +LR L+ L V + LK+ + + ++ G +V LR
Sbjct: 565 GAEFSEVALRGVLRQLIATGALA-------VDAEAFNTLKLTEG-SRAVLKGEASVTLRE 616
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
+ + + S+ + T KG+ PS ++D + K + +L+ R +
Sbjct: 617 SVSSPAERKSRREKT-VKGA-------------PSPAAAKLD-DTGKKRFEALKAWRAEV 661
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
KE + AY IF +ATL +++R P T E+L I+GIG K+ YG +L E+
Sbjct: 662 AKE--HNLPAYVIFHDATLAAIAERAPATLEDLQGISGIGTKKLEAYGSEVLRVCEA 716
>gi|420376469|ref|ZP_14876214.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1235-66]
gi|391303394|gb|EIQ61231.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1235-66]
Length = 609
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 344/654 (52%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +Q E++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSG--QIRLLYIAPERLM-LDNFLEN 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + +
Sbjct: 135 LAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALTATADETTRL 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G A YH ++ A RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+G++L+ L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 357 ---AGQLLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPP 407
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 408 KQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRELAHDKLPVYGIGREQSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ + V Q+ AH+ SA+ T
Sbjct: 468 HWVSVIRQLI-------------------HLGLVTQNIAHH-------------SALQLT 495
Query: 912 KLSKSDVTPAKGSLLSGKLSPSR--NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ ++ P + +L+ R P Q N KL++ LR LR + E
Sbjct: 496 EAAR----PVLRGEVPLQLAVPRIVALKPRAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIRAHV 603
>gi|325579297|ref|ZP_08149253.1| ATP-dependent helicase RecQ [Haemophilus parainfluenzae ATCC 33392]
gi|325159532|gb|EGC71666.1| ATP-dependent helicase RecQ [Haemophilus parainfluenzae ATCC 33392]
Length = 621
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 341/652 (52%), Gaps = 84/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q E+I+A +SG D V+M TG GKSL YQ+PAL PG+TLVISPL+SL
Sbjct: 23 RSVFGYQSFRKGQEEVIHAALSGQDALVVMATGNGKSLCYQIPALCFPGLTLVISPLISL 82
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLY++PEKV +
Sbjct: 83 MKDQVDQLQANGIEADFLNSSQTPEQQQQVENKLISG--QLKLLYISPEKVMTNSFF--- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + ++ I IDEAHC+SQWGHDFRP+Y LG LK FPN P++ALTATA + ++
Sbjct: 138 --QLISYAQISFIAIDEAHCISQWGHDFRPEYTQLGGLKAAFPNAPIMALTATADYATRQ 195
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D++ L L + + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 196 DILTHLKLDHPHKYIGSFDRPNIRYTLEEKFKPMEQLTRFVLAQKGKSGIVYCNSRSKVE 255
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G AA YH ++ A R VQ+ + +D I ++ AT+AFGMGINK +VRFV H
Sbjct: 256 RIAEILRNKGVSAAAYHAGMETALRECVQQDFQRDNIQVVVATIAFGMGINKSNVRFVAH 315
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 316 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIEQ 370
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C NC
Sbjct: 371 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCQNCDICLD 410
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F +++ V RG NQ + + +H+ LS++G GK +
Sbjct: 411 PPKKYDGLIDAQKVMSTIYRVGQCFGVQYVIAVLRGMHNQKIVERQHDKLSVYGIGKDKS 470
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP--SA 907
K ++R L+ F+ + + + + S+ L++ +S A ++ G + L P S+
Sbjct: 471 KEHWQSVIRQLIHLGFIQQVIGEFN-----SATLQLTES-ARPVLKGEVPLELAMPRISS 524
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
IN + T A N L++ LR LR L +
Sbjct: 525 INKIVHTSHKNTVA--------------------------NYDKDLFARLRFLRKQLADK 558
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I
Sbjct: 559 --ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGAIKLERFGQPFMALI 608
>gi|365972647|ref|YP_004954208.1| ATP-dependent DNA helicase recQ [Enterobacter cloacae EcWSU1]
gi|365751560|gb|AEW75787.1| ATP-dependent DNA helicase recQ [Enterobacter cloacae EcWSU1]
Length = 630
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 338/651 (51%), Gaps = 80/651 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL+
Sbjct: 40 ETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLM 99
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ LL + A L+ + +QQE++ + + +LLY+ PE++ D L L
Sbjct: 100 KDQVDQLLANGVAAACLNSSQTREQQQEVMAGCRTG--QVRLLYIAPERLM-LDNFLDHL 156
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + ++D
Sbjct: 157 SHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRQD 212
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEF 614
+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 213 IVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVED 272
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 273 TAARLQNRGFSAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 332
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 333 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP---------- 377
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSFI 792
G++ + L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 378 --QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPPK 429
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 430 QYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEH 489
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
I+R L+ F + + + S L++ ++ A ++ G + L P +
Sbjct: 490 WVSIIRQLIHLGFATQNIAQ-------HSALQLTEA-ARPVLRGDIELKLAVPRVVAL-- 539
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 540 ------------------------KPRVMQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 573
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL ++++ P + E+L +NG+G K+ ++G + I + +
Sbjct: 574 PPYVVFNDATLIEMAEQTPLSASEMLSVNGVGTRKLERFGKEFMALIRAHV 624
>gi|441500281|ref|ZP_20982448.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
gi|441435974|gb|ELR69351.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
Length = 723
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 228/649 (35%), Positives = 340/649 (52%), Gaps = 83/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG SFR Q+EII+ + G D VLMPTGGGKSL YQ+PALI G+T+VISPL++L
Sbjct: 14 KKHFGYDSFRHQQKEIIHHILEGRDALVLMPTGGGKSLCYQVPALIFEGVTIVISPLIAL 73
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A +L+ ++ EQ E++R L + + KLLY+ PE++ D
Sbjct: 74 MKDQVDALRLNGISAAYLNSSLSQQEQAEVMRLLRDN--RLKLLYLAPERLVSGDKGF-- 129
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ L + L+ I IDEAHC+SQWGHDFRP+Y L LK FP PV+ALTATA ++
Sbjct: 130 INFLKDQAKLSMIAIDEAHCISQWGHDFRPEYTQLATLKSVFPEVPVVALTATADKLTQD 189
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D++Q L L N F SFNR N++ L + G + L
Sbjct: 190 DILQQLKLHNPKKFVSSFNRENIYYFVSPKRRSYDQLLQFLNKHKDDTGIIYTLSRASAE 249
Query: 618 SLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G+ A YH +D R Q + KD+I II AT+AFGMGI+K +VRFV+H
Sbjct: 250 SLAEQLIADGYDARPYHAGLDRDVRDKHQDLFIKDQIKIITATIAFGMGIDKSNVRFVVH 309
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMIS-QGVAEQSPFTPGHNRF 731
LPK+IEGY+QE GRAGRDG +S +L+YSY+D ++K + +G +QS
Sbjct: 310 MDLPKNIEGYYQETGRAGRDGLKSEALLFYSYADVKKLKSFVEVEGNTQQS--------- 360
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIKS 790
E + L M Y E CRR L +F E ++A +CD C S+ +
Sbjct: 361 ---------EIMLKKLNEMAEYGELRT-CRRKYLLNYFDE--EAADECGSCDVCLSEEEK 408
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T A+K++ V ++F + ++++ RGS + + +H++L +G G + K
Sbjct: 409 F---DGTVIAQKVLSAVTRLEERFGTGYVIDFLRGSKSAKIWD-KHKSLKTYGVGADIGK 464
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
E + ++ L+ ++L ++ K VLK+ K+ N++ G++ V L I
Sbjct: 465 EEWNHYIKDLIHLNYLAKDDGK-------YPVLKLTH-KSKNVLQGKEQVQLFMIKQIEE 516
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+S + P N+ +L+++L+ LR + + E
Sbjct: 517 PVISVQTI----------------------PVNQ-------ELFTTLKALRMEIAQR--E 545
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V Y +F +ATLQ L+ P + E+L EI+G G K+ KYG L+ +
Sbjct: 546 NVPPYIVFSDATLQELATYKPLSREDLAEISGFGAVKMDKYGAVFLKAV 594
>gi|127514402|ref|YP_001095599.1| ATP-dependent DNA helicase RecQ [Shewanella loihica PV-4]
gi|126639697|gb|ABO25340.1| ATP-dependent DNA helicase RecQ [Shewanella loihica PV-4]
Length = 610
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 225/669 (33%), Positives = 346/669 (51%), Gaps = 83/669 (12%)
Query: 367 DQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQ 426
D +S D + L A + VFG +FR QRE+I G D V+MPTGGGKSL YQ
Sbjct: 2 DLALTSPDVTDSDPLAACLQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQ 61
Query: 427 LPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKY 486
LPAL+ G+TLV+SPL+SL++DQ+ L Q + A +L+ + E I R+L++ +
Sbjct: 62 LPALVLHGLTLVVSPLISLMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNG--EL 119
Query: 487 KLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQK 546
KLLYV+PE++ +D + +L +L L+ IDEAHC+SQWGHDFRP+Y LG LKQ
Sbjct: 120 KLLYVSPERLL-TDSFIERLHNLP----LSLFAIDEAHCISQWGHDFRPEYAALGQLKQL 174
Query: 547 FPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYG 606
FP P++ALTATA + +ED+ Q LG+ + SF+RPN+ VAE+L
Sbjct: 175 FPRVPMMALTATADKATREDICQRLGIAPFELL-TSFDRPNIRY---TVAEKLNAANQLR 230
Query: 607 HFFLLKEFYVVSLEC----------------GHKAAFYHGSIDPAQRAFVQKQWSKDEIN 650
F + + C G+ A YH +RA +Q+++ KD+++
Sbjct: 231 QFIQAQNGNSGIIYCSSRRRVDEVAERLRMQGYHADAYHAGKTQEERADIQERFLKDQLD 290
Query: 651 IICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV 710
I+ ATVAFGMGINK +VRFV+H+ +PKS+E Y+QE GRAGRDG + + + +D RV
Sbjct: 291 IVVATVAFGMGINKSNVRFVVHYDIPKSVEAYYQETGRAGRDGLDAEAFMLFDPADIGRV 350
Query: 711 KHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFG 770
+H+I Q H + NT M ++ E CRR + L+H+
Sbjct: 351 RHLIEQQEPGPQQQVEYH------------KLNT-----MAAFAEAQT-CRRQV-LLHYF 391
Query: 771 EKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQY 830
++ S C CD C + D + A+K++ + Q+F +H++EV RGS
Sbjct: 392 DESASEPC-GNCDIC--LDPPKRYDGVEDAQKVLSCIFRLQQKFGVNHLIEVLRGSKAAS 448
Query: 831 VKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
V H+ LS G GK + I+R ++ F +++ + S +K+N +A
Sbjct: 449 VVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLGFASQDITR-------GSAIKLN-PQA 500
Query: 891 HNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLS 950
++ G + L P +T + + S SR +N
Sbjct: 501 RAVLKGELPLQLAEPRISITTHVKRR--------------SSSR----------APINYD 536
Query: 951 AKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSK 1010
KL++ L+ LR L +E V Y +F +ATL ++ +P + E+L +NG+G+ K+++
Sbjct: 537 RKLFARLKQLRRSLAEEL--DVPPYLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKLNR 594
Query: 1011 YGVRLLETI 1019
+G L+ I
Sbjct: 595 FGGEFLDEI 603
>gi|197364742|ref|YP_002144379.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56130069|gb|AAV79575.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096219|emb|CAR61816.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 609
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC ++ D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDLPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|307152715|ref|YP_003888099.1| RecQ family ATP-dependent DNA helicase [Cyanothece sp. PCC 7822]
gi|306982943|gb|ADN14824.1| ATP-dependent DNA helicase, RecQ family [Cyanothece sp. PCC 7822]
Length = 717
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 220/658 (33%), Positives = 346/658 (52%), Gaps = 75/658 (11%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
LE K+ FG +FRP QR+II + D+ V+MPTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 16 LETALKQYFGYDNFRPGQRQIIEEALQNRDLLVIMPTGGGKSLCFQLPALLKPGLTVVVS 75
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL+SL+QDQ+ LL I ATFL+ ++ +E + RE+ K KLLYV PE++ S+
Sbjct: 76 PLISLMQDQVDALLDNGIGATFLNSSLGLSEIRS--REMAILKNKIKLLYVAPERLL-SE 132
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L+ + ++ IDEAHCVS+WGHDFRP+Y+ L L+Q++P+ P+ LTATAT
Sbjct: 133 KFTPFLDKIALDVGISAFAIDEAHCVSEWGHDFRPEYRQLRQLRQRYPSVPMFGLTATAT 192
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAER--------LQVGLSYGHFFLLK 612
V+ED++ LGL N + SFNRPNL+ D +R ++ G + L
Sbjct: 193 KRVQEDIIVQLGLKNPGVHIASFNRPNLYYDVRPKQQRSYDQLLKYIRTQKGSGIVYCLS 252
Query: 613 EFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
V + G A YH + R Q ++ +D+ ++ AT+AFGMGINK DV
Sbjct: 253 RRNVDEIAFRLQKDGISALPYHAGMTDEARTLNQTRFIRDDAQVMVATIAFGMGINKLDV 312
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV+H LP+++E Y+QE GRAGRDG+ + C ++ + D +++++I Q Q
Sbjct: 313 RFVVHFDLPRNLESYYQESGRAGRDGEPAKCTIFLGFGDLKKIEYIIEQKSNPQEK---- 368
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ + L ++++Y E +CRR + L +FGE+F +C CDNC
Sbjct: 369 -------------KIAQQQLRQVINYAEG-TECRRTIVLRYFGERF-QGNCD-NCDNCRH 412
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+ +D T A+K + V ++F S+I++V RGS ++ ++++ H LS +G GK
Sbjct: 413 PQPV--EDWTIEAQKFLSCVARCRERFGMSYIIDVLRGSNSRRIEQNGHHLLSTYGIGKD 470
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
K E + R L+ + + E SD VLK+N R +LR +
Sbjct: 471 RTKEEWKNLGRSLIHQGLVDE---TSDGL----PVLKLN---------SRSWEILRKQRS 514
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
+ KS A+ L GK +P + +T + +
Sbjct: 515 VQIAIAQKS----AENVL--GKYNPRKAETELL--------------LERLRQLRKYIAD 554
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
A V Y IF ++TL+ ++++ P+T E +I+G+ K+++YG + + I +E
Sbjct: 555 AN-SVAPYVIFPDSTLRLMAEKKPQTRESFAKISGVTDYKINQYGDQFISEIRDFCQE 611
>gi|91228026|ref|ZP_01262111.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus 12G01]
gi|91188255|gb|EAS74554.1| ATP-dependent DNA helicase RecQ [Vibrio alginolyticus 12G01]
Length = 611
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 216/653 (33%), Positives = 344/653 (52%), Gaps = 85/653 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GITLVISPL+SL++
Sbjct: 23 VFGYQEFRDGQQLVIDAAIEGRDSLVILPTGGGKSLCYQIPALVRSGITLVISPLISLMK 82
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A ++ M E + +++ + K L+YV+PE+V D + R LE
Sbjct: 83 DQVDQLKANGVAAECINSTMPREELLSVYNRMHTGHLK--LVYVSPERVLMRDFIER-LE 139
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+L L+ I +DEAHC+SQWGHDFRP+Y LG LKQ+F + P +ALTATA + + D+
Sbjct: 140 NLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKQQFSHVPFMALTATADDATRRDI 195
Query: 568 VQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQV-----GLSYGHFFLLKEFY 615
++ L L N ++ SF+RPN+ + ++ L+ G+ Y E
Sbjct: 196 LERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQIVRYLETQKGNCGIIYCCSRKKVEMV 255
Query: 616 VVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
L H +AA YH +D +RA+VQ+ + +D+I I+ ATVAFGMGINKP+VRFV+H
Sbjct: 256 TEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFD 315
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
+P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 316 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE-----------------K 358
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI----KS 790
+ G + T L M ++ E CRR + L +FGE + +K C NC K
Sbjct: 359 DDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDICLDPPKH 412
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T+ A+K + V Q F +++EV RG N V+++ H+ +S + G+ +
Sbjct: 413 F---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKISTYAIGRDHSH 469
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
I R L+ + L + + + +S L++ + +A L+ G + L P +
Sbjct: 470 DYWVSIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVTLELAVPRLDTA 521
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+ +KS+ +K N KL++ LR LR + E +
Sbjct: 522 ARAAKSEKLTSK-------------------------NYDKKLFAKLRKLRKSIADE--D 554
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
G+ Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 555 GLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|423111286|ref|ZP_17098981.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5243]
gi|423117298|ref|ZP_17104989.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5245]
gi|376376415|gb|EHS89194.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5245]
gi|376377058|gb|EHS89832.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5243]
Length = 608
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 210/654 (32%), Positives = 337/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+ ++G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QIRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N L+ + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LTHWN----LSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLSDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGDVTLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQTPLTAGEMLSVNGVGTRKLERFGKEFMALIRAHV 603
>gi|410029263|ref|ZP_11279099.1| ATP-dependent DNA helicase RecQ [Marinilabilia sp. AK2]
Length = 726
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 221/657 (33%), Positives = 347/657 (52%), Gaps = 79/657 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK+FG FR NQ I++ + + FV+MPTG GKSL YQLPA+I G +VISPL++L
Sbjct: 10 KKIFGFSQFRGNQEPIVDNILGQKNTFVIMPTGAGKSLCYQLPAVIQEGTAIVISPLIAL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+++Q+ L I A FL+ + +E ++ +E+ S K KLLYV PE + K + +L
Sbjct: 70 MKNQVDQLNAFGINAHFLNSTLNKSETNKVKKEVLSG--KTKLLYVAPESLTKEENILFL 127
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL-GILKQKFPNTPVLALTATATASVK 564
++ L+ + IDEAHC+S+WGHDFRP+Y+ + I+ Q P++ALTATAT V+
Sbjct: 128 KDAK-----LSFVAIDEAHCISEWGHDFRPEYRKIKSIIAQLGKELPIIALTATATPKVQ 182
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDC---------EKVAERL--QVGLSYGHFFLLKE 613
+D+ + L + +F+ SFNR NL+ + +++ + + Q G S G + L
Sbjct: 183 QDIQRNLQMEEADLFKSSFNRTNLYYEIRPKLKNETKKQIIKYIKSQKGKS-GIIYCLSR 241
Query: 614 FYVVSLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
V + G KAA YH +D + R Q + +E+++I AT+AFGMGI+KPDVR
Sbjct: 242 KKVEEIAELLKVNGIKAAPYHAGLDQSVRIKNQDDFLNEEVDVIVATIAFGMGIDKPDVR 301
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
+VIH+ +PKS+EGY+QE GRAGRDG C+++Y Y D I+++ + P T
Sbjct: 302 YVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYRYEDIIKLEKF-----NKDKPVTERE 356
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
N ++L L M +Y E+ + CRR L +FGE + C CDNC K
Sbjct: 357 N-------AKIL------LQEMAAYAESSI-CRRKFLLHYFGEILEE-DC-GFCDNCKKP 400
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K E TD +E VK T +F+ H++ V RG N Y+K ++H+ L + G GK
Sbjct: 401 KEKFEG--TDYLLTALETVKNTNNRFNMDHLVNVIRGESNDYIKSYKHDQLEVFGKGKED 458
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ++R +I FL ++++ YG V+K+ + + + P +
Sbjct: 459 DERLWRTVIRQAMIGGFLEKDIEN---YG----VIKITE---------KGEKYYQDPYTV 502
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
K + S N+ P + KL+ L+ R + K
Sbjct: 503 TFCKDHDFE-------------SMLENEAPEEAPATGGKAYDEKLFELLKAERKKVAK-- 547
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+G+ Y IF + +L+ ++ P + EEL +ING+G KV+K+G L+ IE+ ++E
Sbjct: 548 AKGLPPYVIFQDPSLEEMATVYPTSREELAQINGVGMGKVAKFGAPFLKLIENYVEE 604
>gi|383815908|ref|ZP_09971314.1| ATP-dependent DNA helicase RecQ [Serratia sp. M24T3]
gi|383295198|gb|EIC83526.1| ATP-dependent DNA helicase RecQ [Serratia sp. M24T3]
Length = 610
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 340/654 (51%), Gaps = 82/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 RDTFGYQQFRPGQQTIINAAILGKDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+ A + A L+ +QQE++ S + K+LY+ PE++ D L Q
Sbjct: 78 MKDQVDQLMAAGVEAGCLNSTQTREQQQEVMAGCRSG--RIKMLYIAPERLTMGD-FLEQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ N A + +DEAHC+SQWGHDFRP+Y+ LG LK ++P PV+ALTATA + +
Sbjct: 135 LQQWNP----AMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADDATRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + ++ SF+RPN+ + EK +R + G+ Y E
Sbjct: 191 DIVRLLELNDPLVQVSSFDRPNIRYTLVEKFKPLDQLLRFVQDQRGKSGIIYCGSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH ++ +R+ VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISVGAYHAGLENDRRSQVQEAFQRDDVQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L Y +D ++ + ++ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCL-----DEKPAGPQQDVER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E T CRRL+ L +FGE A C NC
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGKQEA-----CGNCDICLD 405
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
++ D A+K + V GQ+F +I+EV RG+ NQ ++++ H+ L ++G G+ +
Sbjct: 406 PPKRYDGLMDAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREYGHDKLPIYGMGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + ++ S L++ ++ A ++ G + L P +
Sbjct: 466 NEHWISVVRQLIHLGLITQNI-------AMHSALQLTEA-ARPVLRGEIAMQLAVPR-LQ 516
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ K+ ++ G N KL++ LR LR L E
Sbjct: 517 TLKIRGTNTQKTYGG-----------------------NYDRKLFAKLRKLRKTLADEG- 552
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
V Y +F + +L +++++P + E+L I G+G+ K+ K+G + I I
Sbjct: 553 -NVPPYVVFNDTSLLEMAEQLPVSPGEMLGITGVGQRKLEKFGRPFMALIRDHI 605
>gi|421847362|ref|ZP_16280501.1| ATP-dependent DNA helicase RecQ [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411771312|gb|EKS55013.1| ATP-dependent DNA helicase RecQ [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 609
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 220/663 (33%), Positives = 349/663 (52%), Gaps = 88/663 (13%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LEMGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N LLA +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNPM-LLA---VDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G A YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++L+ L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRELAHDKLPVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + V Q+ AH+
Sbjct: 459 GIGREQSHEHWVSVIRQLI-------------------HLGLVTQNIAHH---------- 489
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR--NDTPSQPQNEVDLNLSAKLYSSLRML 960
SA+ T+ ++ P + +L+ R P Q N KL++ LR L
Sbjct: 490 ---SALQLTEAAR----PVLRGEVPLQLAVPRIVALKPRAMQKSFGGNYDRKLFAKLRKL 542
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I
Sbjct: 543 RKAIADE--ENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIR 600
Query: 1021 STI 1023
+ +
Sbjct: 601 AHV 603
>gi|348027736|ref|YP_004870422.1| ATP-dependent DNA helicase [Glaciecola nitratireducens FR1064]
gi|347945079|gb|AEP28429.1| ATP-dependent DNA helicase [Glaciecola nitratireducens FR1064]
Length = 627
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 210/649 (32%), Positives = 345/649 (53%), Gaps = 81/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG FRP Q E+I+ ++G D +L+PTGGGKSL YQ+PAL+ GIT+V+SPL+SL
Sbjct: 40 KDTFGYSEFRPGQMEVIDKVLNGQDTLILLPTGGGKSLCYQVPALVLEGITIVVSPLISL 99
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L + A +L+ + + + Q+I +L + + LLYV PE++ +S L
Sbjct: 100 MQDQVQQLTAQGVNAAYLNSSQDAEQSQKITEQLYNG--ELDLLYVAPERLLQS-YFLNS 156
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ +N ++ I +DEAHCVS WGHDFR DY+ LG LK F N P +ALTATA + +
Sbjct: 157 LQRVN----VSLIAVDEAHCVSHWGHDFRQDYRQLGRLKSHFDNVPFIALTATADHATQV 212
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-------WMDCEKVAERLQ-----VGLSYGHFFLLKE 613
D+ L L N +F+ F+RPN+ + E+V ++ G+ Y + +
Sbjct: 213 DIQHQLQLDNPFVFKGGFDRPNIRYNLLAKYKGFEQVVTFVKQQEGAAGIVYCNSRAKVD 272
Query: 614 FYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G K YH D A R FVQ Q+ KD++ ++ ATVAFGMGINK +VRFV+H
Sbjct: 273 DLTQRLQSAGIKCDAYHAGHDTATREFVQTQFLKDDLQVVVATVAFGMGINKSNVRFVVH 332
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H +P+S+E Y+QE GRAGRDG + +L + D R+K IS G A +R++
Sbjct: 333 HDVPRSVESYYQETGRAGRDGMPAEALLLFDERDAARIKQWISTGTAA--------DRYD 384
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ M S+ E CRR + L +F + + C CD C
Sbjct: 385 I---------EMHKFEAMESFAEAQT-CRRQVLLNYFSD-YREEQC-GNCDICLDPPKVF 432
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
E T A++++ V Q S ++++V RG + + ++H LS +G GK + +
Sbjct: 433 EG--TTQAQQILSCVYRLKQDTSVQYVIDVLRGKSIRKILDNKHNELSTYGIGKDQSDNY 490
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS-AINST 911
I++ L+ + L ++ ++S +L++N+S A +++ + V L P +++++
Sbjct: 491 WHNIIQQLIHQGLLRIDM-------TMSGILRINES-ARSVLKAERIVQLAVPKLSVDTS 542
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K +K++ +N+ +L++ L+ LR + +E E
Sbjct: 543 KRNKAE----------------------------PVNIDRQLFAKLKHLRKQIAEE--EN 572
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
V A+ IF +ATL ++ ++P + + + + G+G+ K+ +YG+ + IE
Sbjct: 573 VPAFVIFSDATLADMTDKMPTDKTQFIGVTGVGQTKLERYGMAFISLIE 621
>gi|161936203|ref|YP_152887.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
Length = 614
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 14 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 73
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 74 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 131
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 132 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 186
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 187 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 246
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 247 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 306
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 307 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 361
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 362 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 403
Query: 784 NCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC ++ D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 404 NCDICLDLPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 463
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 464 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 513
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 514 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 549
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 550 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 607
Query: 1023 I 1023
+
Sbjct: 608 V 608
>gi|398799825|ref|ZP_10559106.1| ATP-dependent DNA helicase RecQ [Pantoea sp. GM01]
gi|398097370|gb|EJL87679.1| ATP-dependent DNA helicase RecQ [Pantoea sp. GM01]
Length = 608
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 338/654 (51%), Gaps = 78/654 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ II ++G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 18 QDTFGYQQFRPGQQNIIETALAGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQ++ + S K KLLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQTREQQQQVFADCRSG--KLKLLYIAPERLMM-DNFLDS 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFRP+Y +G L+Q FP+ PV+ALTATA + +
Sbjct: 135 LHQWNP----VMLAVDEAHCISQWGHDFRPEYGSIGQLRQHFPHLPVMALTATADETTRN 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+ L + + +I SF+RPN+ + EK +R + G+ Y + E
Sbjct: 191 DIAHLLQMDDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH ID AQRA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGIDSAQRASVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + ++ Y +D ++ + + V
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKV-------------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE ++ CDNC
Sbjct: 357 ---PGPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QQQCDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + TGQ+F +I+EV RG+ NQ ++ + H+ L ++G G+ +
Sbjct: 408 RRYDGLLEAQKALSSIYRTGQRFGMGYIVEVLRGASNQRIRDNGHDKLPVYGLGREHSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ + + + ++ S L++ ++ A ++ ++L P +
Sbjct: 468 HWISVLRQLIHLGMVTQNI-------AMHSALQLTEA-ARPVLRAEVPLMLAVPRIVTVK 519
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
G SP + N +L++ LR LR + E E
Sbjct: 520 T--------------RGSSSPKVHSG----------NYDRQLFAKLRKLRKAIADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y +F +ATL +++++P + E+L +NG+G K+ ++G L I+ + E
Sbjct: 554 IPPYVVFNDATLIEMAEQMPISASEMLSVNGVGHRKLERFGKPFLVMIKEHVDE 607
>gi|152978031|ref|YP_001343660.1| ATP-dependent DNA helicase RecQ [Actinobacillus succinogenes 130Z]
gi|150839754|gb|ABR73725.1| ATP-dependent DNA helicase RecQ [Actinobacillus succinogenes 130Z]
Length = 614
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 227/649 (34%), Positives = 344/649 (53%), Gaps = 78/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+VFG +FR Q E INA + G D V+M TG GKSL YQLPAL PG+TLVISPL+SL
Sbjct: 15 KEVFGYQAFRLGQEEAINAALQGQDSLVVMATGNGKSLCYQLPALCFPGLTLVISPLISL 74
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL I A +L+ + +QQ++ + S + KLLY++PEKV +
Sbjct: 75 MKDQVDQLLANGIEADYLNSTQTFEQQQQVQNKAISG--QLKLLYLSPEKVMTNSFF--- 129
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
S + ++ I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA ++ ++
Sbjct: 130 --SFISLCQVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADSTTRQ 187
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++Q L L ++ SF+RPN+ + EK VA++ + G+ Y + E
Sbjct: 188 DILQNLRLNRPHLYVGSFDRPNIRYTLVEKFKPVEQLCNFVVAQKGKSGIVYCNSRNKSE 247
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+L+ G A FYH +D +R VQ+ + D I ++ AT+AFGMGINK +VRFV H
Sbjct: 248 KVTEALKKRGVSAEFYHAGMDVTERERVQRAFQHDNIQVVVATIAFGMGINKSNVRFVAH 307
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
L +SIE Y+QE GRAGRD + VL+Y SD+ + ++ + P +P +
Sbjct: 308 FDLSRSIEAYYQETGRAGRDDLPAEAVLFYEPSDYGWLHKILM-----EEPESPQRD--- 359
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
L + + E+ CRRL+ L +FGE + +K C NC
Sbjct: 360 ---------IKLHKLEAIGEFAESQT-CRRLVLLNYFGE-----NRQKPCGNCDICLDPP 404
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+K D A+K++ + TGQ+F +++ V RG NQ ++ HRH+TLS++G GK +K
Sbjct: 405 KKYDGLLDAQKILSAIYRTGQRFGVQYVIGVLRGLNNQKIRDHRHDTLSVYGIGKDKSKE 464
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V V +L + +S VLR
Sbjct: 465 YWQSVIRQLIHLGFIRQ------VMNEVGVMLHLTESA---------RAVLR-----GEI 504
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
KL + TP ++ T + PQ N L++ LR LR + + E
Sbjct: 505 KLELA--TPRLSAI----------ATVASPQRSAVTNYDKDLFARLRFLRKKIAER--EN 550
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ Y +F +ATLQ +S +P ++ E+L+ING+G K ++ + I+
Sbjct: 551 IPPYIVFSDATLQEMSLYLPTSKAEMLQINGVGAIKWDRFAQPFMAIIK 599
>gi|432716451|ref|ZP_19951464.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE9]
gi|431269860|gb|ELF61161.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE9]
Length = 611
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SGHD V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGHDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|455645205|gb|EMF24269.1| ATP-dependent DNA helicase RecQ [Citrobacter freundii GTC 09479]
Length = 609
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 217/663 (32%), Positives = 347/663 (52%), Gaps = 88/663 (13%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LEMGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G A YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++L+ L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRELAHDKLPVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + V Q+ AH+
Sbjct: 459 GIGREQSHEHWVSVIRQLI-------------------HLGLVTQNIAHH---------- 489
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR--NDTPSQPQNEVDLNLSAKLYSSLRML 960
SA+ T+ ++ P + +L+ R P Q N KL++ LR L
Sbjct: 490 ---SALQLTEAAR----PVLRGEVPLQLAVPRIVALKPRAMQKSFGGNYDRKLFAKLRKL 542
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I
Sbjct: 543 RKAIADE--ENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIR 600
Query: 1021 STI 1023
+ +
Sbjct: 601 AHV 603
>gi|417392279|ref|ZP_12155173.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353612508|gb|EHC64868.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
Length = 603
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 3 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 62
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 63 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QVRLLYIAPERL 120
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 121 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 175
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 176 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 235
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 236 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 295
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 296 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 350
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 351 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 392
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 393 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 452
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 453 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 502
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 503 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 538
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 539 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 596
Query: 1023 I 1023
+
Sbjct: 597 V 597
>gi|56461647|ref|YP_156928.1| superfamily II DNA helicase [Idiomarina loihiensis L2TR]
gi|56180657|gb|AAV83379.1| Superfamily II DNA helicase, RecQ [Idiomarina loihiensis L2TR]
Length = 614
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 223/663 (33%), Positives = 348/663 (52%), Gaps = 87/663 (13%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGI 435
P ++LE+ FG H FR Q +I+ A M G D VLMPTGGGKSL YQLPA+ G+
Sbjct: 13 PLKQQLEST----FGYHQFRDGQEDIMQAAMQGRDSLVLMPTGGGKSLCYQLPAICGDGL 68
Query: 436 TLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEK 495
TLVISPL+SL+QDQ+ L +I A L + E ++ L S KLLYV+PE+
Sbjct: 69 TLVISPLLSLMQDQVEALKALDISAATLHSGVSSQESMATMQGLQSG--DIKLLYVSPER 126
Query: 496 VAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLAL 555
V + + +L++L L I +DEAHC+SQWGHDFRP+Y LG+L+ PN P +AL
Sbjct: 127 VLQP-TFIERLQTLK----LNFIAVDEAHCISQWGHDFRPEYGKLGVLRNYLPNVPFMAL 181
Query: 556 TATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GL 603
TATA ++ + D+++ L L ++ R SF+RPN+ ++ EK QV G+
Sbjct: 182 TATADSATQHDIIERLCLREPLVHRSSFDRPNIRYVVQEKYKPLKQVRDYVKKQKGAAGI 241
Query: 604 SY-GHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y G +E + G +AA YH I+ + +Q+ +D+I+++ ATVAFGMGI
Sbjct: 242 IYCGSRKKTEELSESLQQAGVRAAPYHAGIEHQIKESTLRQFLRDDIDVVVATVAFGMGI 301
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQS 722
NKP++RFVIH +P+S+E Y+QE GRAGRDG + V+ Y D ++ MI EQ
Sbjct: 302 NKPNIRFVIHFDIPRSVESYYQETGRAGRDGLPAEAVMLYDPRDAQWIRRMIEDQENEQR 361
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
R++E + ++ ++ + CRRL+ L +F E D K C
Sbjct: 362 ---------------RLVEAQKFSAMQAMAEAQT---CRRLVVLNYFNEYSD-----KEC 398
Query: 783 DNCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSL 841
NC ++ D + A+K + V GQQF +H++EV RGS Q V + H+ LS
Sbjct: 399 GNCDLCLDPPQRYDGLEDAQKALSCVYRVGQQFGINHVVEVLRGSKAQRVLELGHDQLST 458
Query: 842 HGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVV 901
+G GK + +LR L+ +++++++ + L++ + A ++ G +
Sbjct: 459 YGLGKSETQEHWFSVLRQLIHRGLILQDIRR-------FAALQLTDA-ARPVLKGEVPLE 510
Query: 902 LRFPSA-INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
L P + +TK +D R D N++ L+ LR L
Sbjct: 511 LAKPRIELTATKTRITD----------------RGDY-----NKI-------LFRRLRKL 542
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + + V + +F +A L + P T +++LEING+G+ K+++YG ++ +E
Sbjct: 543 RKDIADR--DQVPPFVVFSDAALVEMCVHYPTTAKDMLEINGVGEVKLARYGNEFMQAVE 600
Query: 1021 STI 1023
+ +
Sbjct: 601 AFL 603
>gi|345429420|ref|YP_004822538.1| ATP-dependent DNA helicase [Haemophilus parainfluenzae T3T1]
gi|301155481|emb|CBW14947.1| ATP-dependent DNA helicase [Haemophilus parainfluenzae T3T1]
Length = 621
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 224/652 (34%), Positives = 344/652 (52%), Gaps = 84/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q E+I+A +SG D V+M TG GKSL YQ+PAL PG+TLVISPL+SL
Sbjct: 23 RSVFGYQSFRKGQEEVIHAALSGQDALVVMATGNGKSLCYQIPALCFPGLTLVISPLISL 82
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV +
Sbjct: 83 MKDQVDQLQANGIEADFLNSSQTPEQQQQVENKLISG--QLKLLYVSPEKVMTNSFF--- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + ++ I IDEAHC+SQWGHDFRP+Y LG LK FPN P++ALTATA + ++
Sbjct: 138 --QLISYAQISFIAIDEAHCISQWGHDFRPEYTQLGGLKAAFPNAPIMALTATADYATRQ 195
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D++ L L + + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 196 DILTHLKLDHPHKYIGSFDRPNIRYTLEEKFKPMEQLTRFVLAQKGKSGIVYCNSRSKVE 255
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+L G AA YH ++ A R VQ+ + +D I ++ AT+AFGMGINK +VRFV H
Sbjct: 256 RIAETLRNKGVSAAAYHAGMETALRERVQQDFQRDNIQVVVATIAFGMGINKSNVRFVAH 315
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ ++ ++ E+S TP +
Sbjct: 316 FDLPRSIESYYQETGRAGRDDLPAEAVLFYELADYAWLQKIL----LEKSE-TPQRQIEQ 370
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C NC
Sbjct: 371 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCQNCDICLD 410
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F +++ V RG NQ + + +H+ LS++G GK +
Sbjct: 411 PPKKYDGLIDAQKVMSTIYRVGQCFGVQYVIAVLRGMHNQKILERQHDKLSVYGIGKDKS 470
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP--SA 907
K ++R L+ F+ + + + + S+ L++ +S A ++ G + L P S+
Sbjct: 471 KEHWQSVIRQLIHLGFIQQVIGEFN-----SATLQLTES-ARPVLKGEVPLELAMPRISS 524
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
IN + T A N L++ LR LR L +
Sbjct: 525 INKIVHTSHKNTVA--------------------------NYDKDLFARLRFLRKQLADK 558
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I
Sbjct: 559 --ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGAIKLERFGQPFMALI 608
>gi|146300558|ref|YP_001195149.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
gi|146154976|gb|ABQ05830.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
Length = 705
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 221/658 (33%), Positives = 337/658 (51%), Gaps = 95/658 (14%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L A K+ FG FRPNQ II +SG+D +MPTGGGKS+ +QLPAL+ PGIT+VIS
Sbjct: 6 LHAKLKENFGFEKFRPNQETIITTVLSGNDALAIMPTGGGKSICFQLPALVLPGITIVIS 65
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L++DQ+ L I A +++ + EQQ + L ++ +KL+Y+ PE ++ D
Sbjct: 66 PLIALMKDQVDSLKSNGISACYINSSQSSEEQQYYIDNLKTN--TFKLVYIAPESLSYLD 123
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+ +L ++ I IDEAHC+S WGHDFRP Y LG LK +FP+TPVLALTATA
Sbjct: 124 TIFSELT-------ISLIAIDEAHCISSWGHDFRPAYTNLGYLKNRFPSTPVLALTATAD 176
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLL- 611
+ + D+ + L L N F SF+R NL ++ +R++ + + G + L
Sbjct: 177 KATRVDITKQLNLKNPKTFVASFDRKNLSLEVRPALDRVKQIIDFVENKPNESGIIYCLS 236
Query: 612 ----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
+E + G A YH +D RA Q ++ D+ ++CAT+AFGMGI+K +V
Sbjct: 237 RKTTEELAEKLAKNGIAAKAYHAGLDNTTRAKTQDEFINDDCQVVCATIAFGMGIDKSNV 296
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
R+VIH++LPK+IEGY+QE GRAGRDG + VL+ SY+D I+++ S G+
Sbjct: 297 RWVIHYNLPKNIEGYYQEIGRAGRDGLPAETVLFESYADVIQLQKFASDGLNA------- 349
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ L RM Y + V CRR + L +FGE + +C CD C
Sbjct: 350 -------------DVQLAKLDRMKQYADA-VSCRRKILLSYFGE-LVTENC-GNCDICKN 393
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
+F D T A+K + + + + I++ RGS N Y+ + ++ L +G G
Sbjct: 394 PPTFF--DGTILAQKALSAITRLQESEPLAVIVDFLRGSRNAYIYEKNYQELKTYGIGAD 451
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
++ + ++ L L+ + Y ++ HN I+
Sbjct: 452 ISWYDWNQYLIQLI-----------NLGYCEIA-------FHQHNKIL------------ 481
Query: 908 INSTKLSKSDVTP-AKGSLLSG-KLSPSRNDTPSQPQNEVDLNLSAKLYSSL----RMLR 961
+TP AK L G K+ + +NE+ + + +SL R LR
Sbjct: 482 ----------LTPFAKKVLFEGEKVKLTTVVKKVIDKNEIKQEKAKAVKNSLFETLRKLR 531
Query: 962 TLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ KE E V AY IF +A+L+ + P ++EE L + G+GKAK+ KYG + I
Sbjct: 532 YEIAKE--EEVPAYVIFSDASLRQMEILRPMSDEEFLAVEGVGKAKLEKYGAEFINAI 587
>gi|113461847|ref|YP_719916.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 129PT]
gi|112823890|gb|ABI25979.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 129PT]
Length = 624
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 223/663 (33%), Positives = 343/663 (51%), Gaps = 90/663 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q E+I AT++ D V+M TGGGKSL YQ+PAL G+TLVISPL+SL++
Sbjct: 32 VFGYQSFRKGQLEVIEATLAKKDSLVIMATGGGKSLCYQIPALCFSGLTLVISPLISLMK 91
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL I A +L+ + + +QQ + + S K KLLY++PEK +
Sbjct: 92 DQVDQLLANGINADYLNSSQTFEQQQLVQNKAMSG--KLKLLYISPEKALTTSFF----- 144
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+ ++ I +DE HC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++D+
Sbjct: 145 HFISHCKVSFIAVDETHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADQATRQDI 204
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKEFY 615
+ L L N I+ SF+RPN+ + EK Q+ G+ Y + E
Sbjct: 205 LIHLKLSNPHIYIGSFDRPNIRYSLVEKFKPMEQLSQFIAKQKGKSGIIYCNSRNKVERI 264
Query: 616 VVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
SL + G A YH + QR FVQ+ + D + I+ AT+AFGMGINK +VRFV H
Sbjct: 265 AESLRQKGISAEAYHAGMSNEQREFVQRAFQHDNVQIVVATIAFGMGINKSNVRFVAHFD 324
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q V + P P
Sbjct: 325 LPRSIEAYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKVLLEKPDIPQR------ 373
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEK 794
+ L + + E+ + CRRL+ L +FGE + +K C+NC +K
Sbjct: 374 ------QIELHKLQSIGEFAESQI-CRRLVLLNYFGE-----YQQKPCNNCDICLDPPKK 421
Query: 795 -DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D A+K++ + GQ+F + +I+ V RGS NQ +K+++H+ LS+ G GK ++
Sbjct: 422 YDGLVDAQKVMSAIYRVGQRFGAMYIIAVLRGSQNQKIKEYQHDKLSVFGIGKDRSREYW 481
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
++R L+ + + +I N+ L+ ++S +
Sbjct: 482 QSVIRQLIHLGLIKQ-------------------------VIDHFNITLQL--TLDSLPI 514
Query: 914 SKSD-----VTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + TP S+ + P R T N L++ LR LR + +
Sbjct: 515 LRGEQPLQLATPRISSITNAITIPKRAVT----------NYDKDLFARLRFLRKKIADK- 563
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYK 1028
E + Y IF +ATLQ +++ P TE+E+++ING+G K+ ++ L I+ +F++
Sbjct: 564 -ENIPPYIIFNDATLQEMAQYQPTTEQEMIQINGVGDIKLKRFAQPFLALIKE--HQFFR 620
Query: 1029 TDK 1031
T K
Sbjct: 621 TTK 623
>gi|145628391|ref|ZP_01784192.1| organic solvent tolerance protein [Haemophilus influenzae 22.1-21]
gi|145638475|ref|ZP_01794085.1| organic solvent tolerance protein [Haemophilus influenzae PittII]
gi|260583174|ref|ZP_05850954.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae NT127]
gi|386266538|ref|YP_005830030.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae R2846]
gi|144980166|gb|EDJ89825.1| organic solvent tolerance protein [Haemophilus influenzae 22.1-21]
gi|145272804|gb|EDK12711.1| organic solvent tolerance protein [Haemophilus influenzae PittII]
gi|260093792|gb|EEW77700.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae NT127]
gi|309751607|gb|ADO81591.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae R2866]
gi|309973774|gb|ADO96975.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae R2846]
Length = 619
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 345/651 (52%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLAQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILFEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|373467701|ref|ZP_09558994.1| ATP-dependent DNA helicase RecQ [Haemophilus sp. oral taxon 851 str.
F0397]
gi|371758043|gb|EHO46820.1| ATP-dependent DNA helicase RecQ [Haemophilus sp. oral taxon 851 str.
F0397]
Length = 619
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 345/651 (52%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFAGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + +A IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSKVSFIA---IDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADYATRQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILTHLNLENPHRYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H+ LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHDKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P +
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKAILKGEEPLELAMPRISS 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K+ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIVHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|343085469|ref|YP_004774764.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342354003|gb|AEL26533.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 725
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 225/661 (34%), Positives = 348/661 (52%), Gaps = 84/661 (12%)
Query: 384 NNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLV 443
N KK+FG + FR NQ+ I++ + G++ FV+MPTG GKSL YQLPA+ G +VISPL+
Sbjct: 8 NLKKIFGFNQFRGNQQLIVDNILKGNNTFVIMPTGAGKSLCYQLPAVSNKGTAIVISPLI 67
Query: 444 SLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
+L+++Q+ L I A FL+ + TE + E+++ K LLYV PE + K + +
Sbjct: 68 ALMKNQVDQLNSFGINAHFLNSTLSKTESNRVKGEVSAGLTK--LLYVAPESLTKEENV- 124
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL-GILKQKFPNTPVLALTATATAS 562
+ L+S + ++ + IDEAHC+S+WGHDFRP+Y+ + I+ Q N PV+ALTATAT
Sbjct: 125 KFLKSAD----ISFVAIDEAHCISEWGHDFRPEYRKIKSIIAQIGDNLPVIALTATATPK 180
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-KVAE----------RLQVGLSYGHFFLL 611
V++D+ + L + +F+ SFNR NL+ + KV + Q G S G + L
Sbjct: 181 VQQDIQRNLQMEEADLFKSSFNRTNLYYEVRPKVKSETKKEIIKYIKSQKGKS-GIIYCL 239
Query: 612 KEFYVVSLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
V + G AA YH +D R Q + +E+++I AT+AFGMGI+KPD
Sbjct: 240 SRKKVTEIAELLKVNGINAAPYHAGLDGHVRVKNQDDFLNEEVDVIVATIAFGMGIDKPD 299
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VR+VIH+ +PKS+EGY+QE GR+GRDG C+++Y Y D I+++ + P
Sbjct: 300 VRYVIHYDVPKSLEGYYQETGRSGRDGLEGHCLMFYRYEDIIKLEKF--------NKDKP 351
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+ R N RVL L M +Y E+ V CRR L +FGE S C CDNC
Sbjct: 352 VNEREN----ARVL------LQEMAAYAESSV-CRRRFLLHYFGETL-SKDC-GFCDNCK 398
Query: 787 KIKSFIE--KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
K K E +D+ K++ VK T Q+FS HI+ + +G N Y+ + H+ L G
Sbjct: 399 KTKETFEGKEDII----KVINAVKDTNQRFSMDHIVSLLKGEKNDYILSYGHDKLPSFGI 454
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
GK ++ +LR +I L ++++ YG + L+ + L+
Sbjct: 455 GKDKDETHWKTVLRQSMIFGLLEKDIEN---YGII-------------LLSEKSEDFLKN 498
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P ++ +K + + S+ + V KLY L++ R +
Sbjct: 499 PYSVVISK--------------NHNFDEMAENVSSEEMSNVGKAYDEKLYELLKLERKKV 544
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
K + + Y IF + +L+ ++ P T EEL +ING+G KV+K+G + IE ++
Sbjct: 545 AK--AKNLPPYVIFQDPSLEEMATVYPTTREELAQINGVGTGKVTKFGRSFIRLIEKYVE 602
Query: 1025 E 1025
E
Sbjct: 603 E 603
>gi|320539379|ref|ZP_08039048.1| ATP-dependent DNA helicase [Serratia symbiotica str. Tucson]
gi|320030504|gb|EFW12514.1| ATP-dependent DNA helicase [Serratia symbiotica str. Tucson]
Length = 618
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 340/648 (52%), Gaps = 78/648 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG FRP Q+ IINA + G D V+MPTGGGKSL YQ+PAL+ G+TLV+SPL+SL
Sbjct: 26 RDTFGYQQFRPGQQAIINAAIEGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISL 85
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A N T +Q++ + KLLY+ PE++ L
Sbjct: 86 MKDQVDQLLAYGVSAACY--NSTQTREQQLAAMAGCRSGQIKLLYIAPERLMMDSFL--- 140
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+SL R + +DEAHC+SQWGHDFRP+Y+ LG LKQ+FP PV+ALTATA S +
Sbjct: 141 -DSL-GRCPPVILAVDEAHCISQWGHDFRPEYRALGQLKQRFPAMPVIALTATADESTRG 198
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKV-----------AERLQVGLSYGHFFLLKE 613
D+V+ L L ++ SF+RPN+ + EK +R + G+ Y + E
Sbjct: 199 DIVRLLALHKPLVQVSSFDRPNIRYTLVEKFKPLDQLWHFVQGQRGKSGIIYCNSRAKVE 258
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D +RA VQ+ + +D++ ++ ATVAFGMGINKP+VRFV+H
Sbjct: 259 DTTARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVH 318
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L Y SD ++ + E+ P
Sbjct: 319 FDIPRNIESYYQETGRAGRDGLPAEALLLYDPSDMAWLRRCL-----EEKP--------- 364
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
A R +E + N+ M ++ E CRRL+ L +FGE H + C NC
Sbjct: 365 -AGQQRDIERHKLNV--MGAFAEAQT-CRRLVLLNYFGE---GKH--QDCGNCDICLDPP 415
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D + A+K + V GQ+F +I+EV RGS NQ ++++ H L ++G G +
Sbjct: 416 KRYDGLEDARKALSCVYRVGQRFGLGYIVEVLRGSNNQLMREYGHNQLPVYGIGHDRSTE 475
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR L+ F+ + + ++ S L++ ++ A ++ G + L P I S
Sbjct: 476 HWISVLRQLIHLGFITQNI-------TMHSALQLAEA-ARPVLRGEVALQLAVPR-IQSL 526
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+ S + G N KL++ LR LR + E E
Sbjct: 527 RPRSSANQKSYGG-----------------------NYDRKLFAKLRKLRKSIADE--EN 561
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y +F +ATL + +++P T +LL ING+G+ K+ ++G + I
Sbjct: 562 IPPYVVFNDATLLEMVEQMPITAGDLLSINGVGQRKLVRFGTSFMAMI 609
>gi|410637731|ref|ZP_11348302.1| ATP-dependent DNA helicase RecQ [Glaciecola lipolytica E3]
gi|410142699|dbj|GAC15507.1| ATP-dependent DNA helicase RecQ [Glaciecola lipolytica E3]
Length = 609
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 220/647 (34%), Positives = 341/647 (52%), Gaps = 80/647 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+VFG FR Q+++I +S D VLMPTGGGKSL YQ+PALI PGIT+V+SPL+SL
Sbjct: 23 KEVFGYSHFRDGQQQVIEQVLSQRDALVLMPTGGGKSLCYQIPALILPGITIVVSPLISL 82
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + + ATF++ ++ + I R+L K+KLLYV PE++ + + + R
Sbjct: 83 MKDQVDALTASGVAATFINSSIPREQLLNIYRQLQDG--KFKLLYVAPERLMQLEFIDR- 139
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L +LN L+ I +DEAHCVS WGHDFR DY+ LG LK FPN PV+ LTATA + +
Sbjct: 140 LHTLN----LSLIAVDEAHCVSHWGHDFRQDYRLLGQLKTHFPNIPVMGLTATADIATRA 195
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERL--------QVGLSYGHFFL-LKE 613
D+ Q L L +FR SF+RPN+ + K ++L G+ Y + + E
Sbjct: 196 DITQQLNLQTPYVFRSSFDRPNIRYNLLSKYKAVDQLIHYVKGQEGSGIVYCNSRAKVDE 255
Query: 614 FYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G +A YH ++P R +Q+ + +D +++I ATVAFGMGINK +VR+V+H
Sbjct: 256 LSFKLAKQGINSAGYHAGLEPEIREKIQRDFIQDNVDVIVATVAFGMGINKSNVRYVVHF 315
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LP+SIE Y+QE GRAGRDG + +L Y D R++ I+ G
Sbjct: 316 DLPRSIESYYQETGRAGRDGMPAEALLLYDEKDAARIRQWIAMG---------------- 359
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC-SKIKSFI 792
N+ R + + M ++ + CRR + L +F E + AHC CD C + K F
Sbjct: 360 ENTER-HDVELQKFAAMEAFADAQT-CRRQVLLNYFSE-YSGAHC-GNCDICVNPPKRF- 414
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K++ + Q ++ ++++V RG ++ + + +H+ L HGAGK +SE
Sbjct: 415 --DGTIQAQKVLSCIYRLEQNAATQYVIDVLRGKSHKRIVEQQHDKLPTHGAGKD--QSE 470
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
A H VI + + + + D+ QN L+ A
Sbjct: 471 AH---WHNVISQLIHQGLIRIDI---------------------TQNATLKLTEAARPVL 506
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
S+ VT A L +ND + L++ L+ LR + ++ + V
Sbjct: 507 KSEVQVTLAVPRLALETSKRGKNDKR---------HYDRVLFAKLKHLRKSISEQ--DDV 555
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ +F +A+L +++ +P + L+I+G+GK K+ +YG R L I
Sbjct: 556 PPFVVFSDASLADMAEYLPNNSSQFLQISGVGKTKLERYGERFLALI 602
>gi|294142824|ref|YP_003558802.1| ATP-dependent DNA helicase RecQ [Shewanella violacea DSS12]
gi|293329293|dbj|BAJ04024.1| ATP-dependent DNA helicase RecQ [Shewanella violacea DSS12]
Length = 610
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 227/668 (33%), Positives = 346/668 (51%), Gaps = 86/668 (12%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGI 435
P L ++ + VFG +FR QRE+I +G D V+MPTGGGKSL YQLPAL PG+
Sbjct: 10 PQLDPLSSSLQSVFGYRTFRKGQREVIEQICAGVDCLVIMPTGGGKSLCYQLPALQMPGL 69
Query: 436 TLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEK 495
T+V+SPL+SL++DQ+ L Q + A +L+ + E ILRE++S + KLLYV+PE+
Sbjct: 70 TIVVSPLISLMKDQVDSLQQMGVNAGYLNSSQAGQESARILREMHSG--ELKLLYVSPER 127
Query: 496 VAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLAL 555
+ ++ + R L L+ ++ IDEAHC+SQWGHDFRP+Y LG L+Q FP+ P++AL
Sbjct: 128 LLQASFIDR-LHELH----ISLFAIDEAHCISQWGHDFRPEYAALGRLRQYFPHVPIMAL 182
Query: 556 TATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFY 615
TATA + ++D+ Q L + F SF+RPN+ VAE+L F +
Sbjct: 183 TATADQATRQDICQRL-TITPFSFLTSFDRPNIRY---TVAEKLNAANQLRQFVTAQNGT 238
Query: 616 VVSLECG----------------HKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
+ CG H A YH +RA VQ ++ KD+++I+ ATVAFG
Sbjct: 239 SGIIYCGSRRRVDEVAERLRLQGHNADSYHAGRTQEERADVQDRFLKDQLDIVVATVAFG 298
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINK +VR+V+H+ +PKS+E Y+QE GRAGRDG S ++ + +D RV+H+I Q
Sbjct: 299 MGINKSNVRYVVHYDIPKSVESYYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQS-- 356
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
PG + + L M ++ E CRR + L +F E +
Sbjct: 357 -----EPGPQQ----------QVELHKLNTMAAFAEAQT-CRRQVLLHYFDES-----AE 395
Query: 780 KTCDNCSKIKSFIEK--DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHE 837
+ C NC ++ + D K L + +L Q F +H++EV RGS V H+
Sbjct: 396 EPCGNCDICLDPPKRYNGIQDAQKVLSSIYRLK-QGFGINHLIEVLRGSKAANVLDRGHD 454
Query: 838 TLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGR 897
LS G GK + I+R ++ F +++ + S +K+N S A ++ G
Sbjct: 455 KLSTWGIGKDKSHEYWLSIIRQIIHLGFASQDITR-------GSSVKLNPS-ARAVLKGE 506
Query: 898 QNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSL 957
++L P I T S R+ + P LN KL++ L
Sbjct: 507 VELLLAEPRIILQTT------------------SKRRSGSTRAP-----LNYDRKLFARL 543
Query: 958 RMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLE 1017
++LR L +E V Y +F +ATL ++ P + ELL +NG+G+ K+ ++G L+
Sbjct: 544 KLLRRRLAEEL--DVPPYLVFNDATLAEMAAMTPTSPGELLAVNGVGERKLGRFGGEFLD 601
Query: 1018 TIESTIKE 1025
I + + +
Sbjct: 602 EITNYLAD 609
>gi|238892418|ref|YP_002917152.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|365144577|ref|ZP_09348793.1| ATP-dependent DNA helicase recQ [Klebsiella sp. 4_1_44FAA]
gi|378976322|ref|YP_005224463.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386037440|ref|YP_005957353.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae KCTC 2242]
gi|402783066|ref|YP_006638612.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419976110|ref|ZP_14491512.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419981887|ref|ZP_14497157.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987417|ref|ZP_14502537.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419992987|ref|ZP_14507936.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419999205|ref|ZP_14513983.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420004974|ref|ZP_14519604.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010567|ref|ZP_14525038.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420016807|ref|ZP_14531094.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022207|ref|ZP_14536378.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420027870|ref|ZP_14541857.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420033622|ref|ZP_14547424.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420039320|ref|ZP_14552956.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420045195|ref|ZP_14558666.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420051125|ref|ZP_14564416.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420056758|ref|ZP_14569910.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061820|ref|ZP_14574803.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420068079|ref|ZP_14580864.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073504|ref|ZP_14586129.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420079309|ref|ZP_14591756.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420085306|ref|ZP_14597536.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421908873|ref|ZP_16338705.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421917229|ref|ZP_16346791.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424833268|ref|ZP_18257996.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424930893|ref|ZP_18349265.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425084062|ref|ZP_18487159.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425094091|ref|ZP_18497174.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428151187|ref|ZP_18998930.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428934219|ref|ZP_19007747.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae JHCK1]
gi|428939135|ref|ZP_19012250.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae VA360]
gi|238544734|dbj|BAH61085.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|339764568|gb|AEK00789.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae KCTC 2242]
gi|363648000|gb|EHL87187.1| ATP-dependent DNA helicase recQ [Klebsiella sp. 4_1_44FAA]
gi|364515733|gb|AEW58861.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397341372|gb|EJJ34552.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397342014|gb|EJJ35183.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397344702|gb|EJJ37833.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397358598|gb|EJJ51314.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397359601|gb|EJJ52294.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397363627|gb|EJJ56265.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397374431|gb|EJJ66767.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397378264|gb|EJJ70477.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397385030|gb|EJJ77135.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392581|gb|EJJ84369.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397394580|gb|EJJ86306.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403296|gb|EJJ94873.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397409845|gb|EJK01145.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397410215|gb|EJK01502.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397420262|gb|EJK11348.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397427007|gb|EJK17798.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397429873|gb|EJK20579.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397437837|gb|EJK28380.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397443829|gb|EJK34130.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397449321|gb|EJK39461.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543905|gb|AFQ68054.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405597672|gb|EKB70935.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405610253|gb|EKB83062.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407805080|gb|EKF76331.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410117240|emb|CCM81330.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410120477|emb|CCM89416.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414710718|emb|CCN32422.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426303386|gb|EKV65559.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae JHCK1]
gi|426304490|gb|EKV66633.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae VA360]
gi|427538860|emb|CCM95068.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 608
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/654 (32%), Positives = 337/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QVRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKPFMALIRAHV 603
>gi|387791080|ref|YP_006256145.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379653913|gb|AFD06969.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 729
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 215/668 (32%), Positives = 345/668 (51%), Gaps = 86/668 (12%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
K L N + FG F+ Q EII + +SG+D FV+MPTGGGKS+ YQLPAL+ G +V
Sbjct: 5 KSLFDNLQNFFGFEKFKGEQEEIITSILSGNDTFVIMPTGGGKSMCYQLPALMSDGTAIV 64
Query: 439 ISPLVSLIQDQIMHLL---QANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEK 495
ISPL++L+++Q+ L + A FL+ ++ TE ++ +++ S + KLLYV PE
Sbjct: 65 ISPLIALMKNQVDQLRAFGSTDSIAHFLNSSLNKTETAKVKQDVLS--GETKLLYVAPES 122
Query: 496 VAKSDVL--LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL-GILKQKFPNTPV 552
++K + + LR ++ ++ + +DEAHC+S+WGHDFRP+Y+ + I+ Q N P+
Sbjct: 123 LSKQENIDFLRDID-------ISFVAVDEAHCISEWGHDFRPEYRKIRQIIGQLGENIPI 175
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY------- 605
+ALTATAT V++D+ + L + N +F+ SFNRPNL+ + L+ + Y
Sbjct: 176 IALTATATPKVQQDIQKNLQMQNSQVFKSSFNRPNLFYEIRPKKNELKEIIKYIKSQNGK 235
Query: 606 -GHFFLLKEFYVVSLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
G + L V + G KA YH +D RA Q ++ +++ +I AT+AFG
Sbjct: 236 AGIIYCLSRKKVEEVAETLNVNGIKALPYHAGLDANTRATTQDKFLMEDVQVIVATIAFG 295
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV-KHMISQGV 718
MGI+KPDVRFVIH+ +PKS+EGY+QE GRAGRDG +C+ +Y D ++ K M + V
Sbjct: 296 MGIDKPDVRFVIHYDMPKSMEGYYQETGRAGRDGGEGNCIAFYDQKDIDKLAKFMKDKPV 355
Query: 719 AEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC 778
+E+ E T+ L ++ Y E+ V CRR L +FGE ++ + C
Sbjct: 356 SER-------------------EIGTQILKEVIDYAESSV-CRRKQILHYFGESYNESSC 395
Query: 779 KKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHET 838
CDNC K E + A ++ L+ G+ F + HI+ + G + + H+
Sbjct: 396 SNMCDNCRSPKERFEAEADLLA--VLRLINTLGENFDAEHIINILAGLEDAEMNTFSHDE 453
Query: 839 LSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQ 898
+ G+GK +LR VI +FL +++ D YG +LK+ + + I
Sbjct: 454 MPEFGSGKDRGVVIWKSVLRQAVIHNFLGKDI---DSYG----ILKLTKY-GKSFIDAPY 505
Query: 899 NVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLR 958
++ + + K S D G L L L
Sbjct: 506 SIKFIINTDFDKIKASDDDEVKGGGGALDDVL--------------------------LG 539
Query: 959 MLRTLLVKEAGE-GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLE 1017
ML+ L K A + + + IF + +L+ ++ + P +EL +I+G+G K +YG +E
Sbjct: 540 MLKDLRKKIAKQKNIPPFVIFQDPSLEEMASQYPINMDELKQISGVGNGKAMRYGAPFIE 599
Query: 1018 TIESTIKE 1025
I+ ++E
Sbjct: 600 LIKKYVEE 607
>gi|152972806|ref|YP_001337952.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|329997483|ref|ZP_08302785.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. MS 92-3]
gi|449059651|ref|ZP_21737339.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae hvKP1]
gi|150957655|gb|ABR79685.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|328539051|gb|EGF65090.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. MS 92-3]
gi|448874669|gb|EMB09708.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae hvKP1]
Length = 608
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/654 (32%), Positives = 337/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QVRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKPFMALIRAHV 603
>gi|395230323|ref|ZP_10408628.1| ATP-dependent DNA helicase recQ [Citrobacter sp. A1]
gi|424730831|ref|ZP_18159424.1| atp-dependent dna helicase [Citrobacter sp. L17]
gi|394716054|gb|EJF21831.1| ATP-dependent DNA helicase recQ [Citrobacter sp. A1]
gi|422894736|gb|EKU34544.1| atp-dependent dna helicase [Citrobacter sp. L17]
Length = 604
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 217/663 (32%), Positives = 347/663 (52%), Gaps = 88/663 (13%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 4 LEMGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 63
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 64 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 121
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 122 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALT 176
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 177 ATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 236
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G A YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 237 YCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMGIN 296
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 297 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 351
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++L+ L M ++ E CRRL+ L +FGE ++ C
Sbjct: 352 ------------AGQLLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 393
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++
Sbjct: 394 NCDICLDPPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRELAHDKLPVY 453
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + V Q+ AH+
Sbjct: 454 GIGREQSHEHWVSVIRQLI-------------------HLGLVTQNIAHH---------- 484
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSR--NDTPSQPQNEVDLNLSAKLYSSLRML 960
SA+ T+ ++ P + +L+ R P Q N KL++ LR L
Sbjct: 485 ---SALQLTEAAR----PVLRGDVPLQLAVPRIVALKPRAMQKSFGGNYDRKLFAKLRKL 537
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I
Sbjct: 538 RKAIADE--ENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIR 595
Query: 1021 STI 1023
+ +
Sbjct: 596 AHV 598
>gi|269137489|ref|YP_003294189.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda EIB202]
gi|387866249|ref|YP_005697718.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda FL6-60]
gi|267983149|gb|ACY82978.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda EIB202]
gi|304557562|gb|ADM40226.1| ATP-dependent DNA helicase RecQ [Edwardsiella tarda FL6-60]
Length = 609
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 215/654 (32%), Positives = 343/654 (52%), Gaps = 79/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG FRP Q+ I+ A ++G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 KDTFGYQQFRPGQQAIVEAAIAGRDCLVVMPTGGGKSLCYQIPALVRDGLTIVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ + +QQ + S + +LLY+ PE++ D LL
Sbjct: 78 MKDQVDQLQANGVNAACLNSTLNREQQQAVYAGCRSG--EIRLLYIAPERLMM-DNLLDT 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N LLA +DEAHC+SQWGHDFRP+Y LG +K++FP PV+ALTATA + ++
Sbjct: 135 LPQWNP-TLLA---VDEAHCISQWGHDFRPEYSALGQIKRRFPQMPVIALTATADDATRQ 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKV-----------AERLQVGLSYGHFFLLKE 613
D++ L L + ++ SF+RPN+ + EK ++R + G+ Y + E
Sbjct: 191 DILGLLDLRDPLVQVSSFDRPNIRYTLIEKFKPLDQLWHFVQSQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G YH +D +RA VQ+ + +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGLSVGAYHAGLDNGRRAEVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEALLFYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G E L M ++ E CRRL+ L +FGE +++CDNC
Sbjct: 357 ---EGAQKEIERHKLNAMNAFAEAQT-CRRLVLLNYFGEGR-----QESCDNCDICLDPP 407
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
++ D A+K + V GQ+F +++EV RG+ + +++ H+ LS++G G+ +
Sbjct: 408 KRYDGLLDAQKALSTVARVGQRFGIGYVVEVLRGANSARIREWGHDKLSVYGIGREHSTE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
ILR L+ + + + ++ S L++ ++ A ++ G + L P IN
Sbjct: 468 HWVSILRQLIHLGLVTQNI-------ALHSALQLTEA-ARPVLRGEVALPLAVPRVINLK 519
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
S + Q N KL++ LR LR + E E
Sbjct: 520 ARSSA-------------------------QKSYGGNYDRKLFAKLRKLRKAIADE--EN 552
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ Y +F +ATL +++++P +LL ING+G+ K+ ++G + I + E
Sbjct: 553 IPPYVVFNDATLLEMAEQMPLRAGDLLSINGVGQRKLERFGAPFMTLIREHLDE 606
>gi|197265653|ref|ZP_03165727.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197243908|gb|EDY26528.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 615
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 217/661 (32%), Positives = 349/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LESGAKQVLQETFGYQQFRPGQEAIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N LLA +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP-VLLA---VDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|255037625|ref|YP_003088246.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
gi|254950381|gb|ACT95081.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
Length = 717
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 220/665 (33%), Positives = 346/665 (52%), Gaps = 80/665 (12%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
T KLEA KK FG SFRP Q EII+ M+ D VLMPTGGGKS+ +Q+PA++ G+T+
Sbjct: 3 TNKLEAL-KKYFGYDSFRPQQSEIIDTIMANRDCMVLMPTGGGKSVCFQIPAVLRDGLTI 61
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL++L++DQ+ L I A FL+ + EQ +I+ ++ + KLLY+ PE++
Sbjct: 62 VISPLIALMKDQVEALRGNGINAAFLNSTISGAEQDQIMWQIR--LGELKLLYIAPERLF 119
Query: 498 KSDV--LLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLAL 555
+ LLR+ + IDE+HC+S WGHDFRP+Y+ L +LK +FP+ P++AL
Sbjct: 120 AGNTFDLLREWN-------VTLFAIDESHCISSWGHDFRPEYRQLNLLKLRFPDVPIVAL 172
Query: 556 TATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL------------QVGL 603
TATA + D+++ L + + F SF+RPNL ++ +R+ Q G+
Sbjct: 173 TATADRVTRRDILKQLNIEHAETFISSFDRPNLSLNVLPGRKRIEQIQRFVNKHEGQPGI 232
Query: 604 SYGHFFLLKEFYVVSLE-CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGI 662
Y E SL+ G + A+YH + +R+ VQ+ + +D+I II AT+AFGMGI
Sbjct: 233 IYCLSRKGTETVAASLQKAGFRVAYYHAGMPGDKRSQVQENFLRDDIQIIVATIAFGMGI 292
Query: 663 NKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI--SQGVAE 720
+K +VR+VIH++LP ++E ++QE GRAGRDG + VL+YSY D I + MI S AE
Sbjct: 293 DKSNVRWVIHYNLPSNVESFYQEIGRAGRDGASADTVLFYSYLDIITRQDMINNSDQSAE 352
Query: 721 QSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKK 780
Q H + N RM Y E D+ CRR + L +F E D H
Sbjct: 353 QKELL--HAKLN----------------RMKQYAEADI-CRRRILLSYFNEPVD--HDCG 391
Query: 781 TCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLS 840
CD C ++ D T A+K + + T Q+ + ++++ RGS N+ + +H +E L
Sbjct: 392 NCDVCRNPRTRF--DATIIAQKALSGIARTEQKVAMGMLIDILRGSRNRNIIQHGYERLP 449
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
G G L E S L ++ + D+ + K+N L RQ
Sbjct: 450 TFGVGHELRTDEWSEYLGQMLNSGVM-------DIAYDEAHSFKLNPVSWQVLKGERQIE 502
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
+++F ++ K + ++ P + +P+ E+ + L+ LR L
Sbjct: 503 LVKF-IPLSERKAKEEELVPKE-----------------KPKQEI---IRDALFERLRQL 541
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R L GV Y +F +A+L ++++ P +E ++ ++G+G K +YG + I
Sbjct: 542 RKKLADAL--GVPPYVVFSDASLSEMAQKKPVSEAQMKAVSGVGAEKFRRYGEAFINEIL 599
Query: 1021 STIKE 1025
+E
Sbjct: 600 DFARE 604
>gi|419958981|ref|ZP_14475038.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp. cloacae
GS1]
gi|388605950|gb|EIM35163.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp. cloacae
GS1]
Length = 609
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 335/648 (51%), Gaps = 78/648 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL+
Sbjct: 19 ETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLM 78
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ LL + A L+ +QQE++ + + +LLY+ PE++ D L L
Sbjct: 79 KDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTG--QVRLLYIAPERLM-LDNFLDHL 135
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + ++D
Sbjct: 136 AHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRQD 191
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEF 614
+V+ LGL + I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 192 IVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVED 251
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 252 TAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 311
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 312 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP---------- 356
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
G++ + L M ++ E CRRL+ L +FGE A C CD C + +
Sbjct: 357 --QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPKQ 409
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 410 YDGLMDARKALSTIGRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHW 469
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
I+R L+ F + + + S L++ ++ A ++ G + L P +
Sbjct: 470 VSIIRQLIHLGFATQNIAQ-------HSALQLTEA-ARPVLRGEVELKLAVPRVVAL--- 518
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
P Q N KL++ LR LR + E E +
Sbjct: 519 -----------------------KPRVMQKSYGGNYDRKLFAKLRKLRKAIADE--ENIP 553
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
Y +F +ATL +++++P + E+L +NG+G K+ ++G + I S
Sbjct: 554 PYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIRS 601
>gi|212710158|ref|ZP_03318286.1| hypothetical protein PROVALCAL_01212 [Providencia alcalifaciens DSM
30120]
gi|212687157|gb|EEB46685.1| hypothetical protein PROVALCAL_01212 [Providencia alcalifaciens DSM
30120]
Length = 608
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 220/655 (33%), Positives = 344/655 (52%), Gaps = 85/655 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG SFRP Q +I + G D VLMPTGGGKSL YQ+PAL+ GITLV+SPL+SL++D
Sbjct: 21 FGYQSFRPGQDAVIGGILDGRDCLVLMPTGGGKSLCYQVPALVKQGITLVVSPLISLMKD 80
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L + A L+ + EQ++I+ + K KLLYV PE++ +D ++QLES
Sbjct: 81 QVDQLKLHGVEAACLNSSQTSLEQRQIMEQCTQG--KIKLLYVAPERLL-TDYFIQQLES 137
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
+ +A + +DEAHC+SQWGHDFRP+Y+ LG L++ PN PV+ALTATA + + D+V
Sbjct: 138 WD----IALLAVDEAHCISQWGHDFRPEYRSLGQLRRALPNVPVMALTATADETTRADIV 193
Query: 569 QALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLLKEF 614
+ L L + +I SF+RPN LW + A++ + G+ Y + E
Sbjct: 194 RLLELNDPLIHVSSFDRPNIRYTLVEKYKPLDQLWFFIK--AQKGKSGIVYCNSRSKVEE 251
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G A YH ++ AQR +VQ + KD + I+ ATVAFGMGINK +VRFV H
Sbjct: 252 TAERLQKRGLSVAAYHAGLENAQREWVQDAFQKDNLQIVVATVAFGMGINKSNVRFVAHF 311
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 312 DIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCL-----EEKP---------- 356
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+G + L + ++ E CRRL+ L +FGE + +K C NC +
Sbjct: 357 --AGMQQDIERHKLNAIAAFAEAQT-CRRLVLLNYFGE-----NRQKPCGNCDICLDPPK 408
Query: 794 K-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D A+K + + GQ+F +I+EV RG+ NQ ++ H+ L ++G GK
Sbjct: 409 RYDGLVDAQKALSCIYRVGQRFGIGYIVEVLRGANNQRIRDLGHDKLPVYGIGKEHTNEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+LR L+ + + + S L++ ++ A ++ G + L P +
Sbjct: 469 WVSVLRQLIHLGMITQNITH-------FSALQLTEA-ARPILRGEMPLQLAVPRVL---- 516
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEV-DLNLSAKLYSSLRMLRTLLVKEAGEG 971
++ SRN QN++ N KL++ LR LR + E E
Sbjct: 517 -----------------VTKSRNQ-----QNKIYHGNYDKKLFAKLRKLRKSIADE--EN 552
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
+ + +F +ATL +++ P ELL ING+G+ K+ ++G + I+ ++ +
Sbjct: 553 IPPFVVFNDATLIEMAEHCPTKPVELLLINGVGERKLERFGEAFMTLIQDHLEGY 607
>gi|425078981|ref|ZP_18482083.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425084628|ref|ZP_18487721.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405589261|gb|EKB62831.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405608866|gb|EKB81789.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 608
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/654 (32%), Positives = 337/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QVRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRIPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKPFMALIRAHV 603
>gi|378696929|ref|YP_005178887.1| ATP-dependent DNA helicase [Haemophilus influenzae 10810]
gi|301169448|emb|CBW29048.1| ATP-dependent DNA helicase [Haemophilus influenzae 10810]
Length = 619
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 345/651 (52%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILFEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIVERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|145630467|ref|ZP_01786247.1| ATP-dependent DNA helicase [Haemophilus influenzae R3021]
gi|144983857|gb|EDJ91299.1| ATP-dependent DNA helicase [Haemophilus influenzae R3021]
Length = 619
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 345/651 (52%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLAQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|326789234|ref|YP_004307055.1| ATP-dependent DNA helicase RecQ [Clostridium lentocellum DSM 5427]
gi|326539998|gb|ADZ81857.1| ATP-dependent DNA helicase RecQ [Clostridium lentocellum DSM 5427]
Length = 733
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/660 (31%), Positives = 342/660 (51%), Gaps = 91/660 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK +G +FRP Q E+I A +SG D +MPTGGGKS+ YQ+PAL+ G+T+VISPL+SL
Sbjct: 8 KKYYGYDAFRPGQEELIQAILSGKDALGIMPTGGGKSICYQVPALLLDGVTIVISPLISL 67
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDV--LL 503
++DQ+ L + I A ++ + E +EI N+ YKLLYV PE++ L+
Sbjct: 68 MKDQVDTLKEYGIEAELINSTLSTKEFREI--RANARMGAYKLLYVAPERLETESFMDLI 125
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLA-LTATATAS 562
R++ ++ + +DEAHCVSQWGHDFRP Y+ + + P P++A TATAT
Sbjct: 126 REVP-------VSMVAVDEAHCVSQWGHDFRPSYRRVSQILYALPKRPIVAAFTATATPL 178
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQ---------VGLSYGHFFL--- 610
VKED+++ L L SF+RPNL+ + K +L VG S G +
Sbjct: 179 VKEDIIKLLELNKPFELTSSFDRPNLYFEVRKPENKLHETEMYLREHVGES-GVIYCATR 237
Query: 611 --LKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
+ + Y L G YH + A+R+ Q + D ++++ AT AFGMGI+KP+VR
Sbjct: 238 KGVDDLYERLLRLGLPCTKYHAGLSEAERSSNQDDFLYDRVSVMIATNAFGMGIDKPNVR 297
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV+H+++PK++EGY+QE GRAGRDG+ + C+L + D + +++I
Sbjct: 298 FVLHYNMPKNMEGYYQEAGRAGRDGEEAQCILLFGTQDIMTNRYLIE------------- 344
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKF---DSAHCKKTCDNC 785
N GR +E + N MV YC N C R L +FG++ D HC +C+N
Sbjct: 345 ---NANGLGRQIEYDKLN--SMVDYC-NTESCLRNYILNYFGQQTLEEDCHHC-GSCNND 397
Query: 786 SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
++ E D+T A+K++ VK ++F S+ + +V +GS Q +K + L+ +G
Sbjct: 398 TE-----ESDITVEAQKILSCVKRMKERFGSTQVADVLKGSNTQKIKSFKFNELTTYGVM 452
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
K K ++ LV E +L ++G Q +++
Sbjct: 453 KDYPKDTIKELISFLVAEGYLQ--------------------------LVGTQYPIIQLT 486
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
A K VT + + + TP + ++ +D + L+ LR +R +
Sbjct: 487 EASYEVLKGKKPVTIKRILV--------KETTPVRSRSGLDAKVDLVLFEKLRSIRYDIA 538
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ + + + +F + TL+ +S R P T+E LL+++G+G+ K++KYG + I++ + E
Sbjct: 539 HK--QHIQPFMVFPDTTLKEMSSRYPTTDEALLQVSGVGEHKLNKYGQDFIAIIKTYVDE 596
>gi|68249329|ref|YP_248441.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae 86-028NP]
gi|229844599|ref|ZP_04464738.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae 6P18H1]
gi|68057528|gb|AAX87781.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae 86-028NP]
gi|229812313|gb|EEP48003.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae 6P18H1]
Length = 619
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 346/651 (53%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQK 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILFEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P +
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEPLELAMPRISS 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|170022156|ref|YP_001727110.1| ATP-dependent DNA helicase RecQ [Escherichia coli ATCC 8739]
gi|169757084|gb|ACA79783.1| ATP-dependent DNA helicase, RecQ family [Escherichia coli ATCC 8739]
Length = 609
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL++ +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLIDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|62182427|ref|YP_218844.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|168263151|ref|ZP_02685124.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168822671|ref|ZP_02834671.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194446579|ref|YP_002043188.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|213427355|ref|ZP_03360105.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213649567|ref|ZP_03379620.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|224585773|ref|YP_002639572.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|289828697|ref|ZP_06546492.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|375003823|ref|ZP_09728161.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375116774|ref|ZP_09761944.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378961517|ref|YP_005219003.1| ATP-dependent DNA helicase recQ [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|409247635|ref|YP_006888331.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416529343|ref|ZP_11744310.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416540118|ref|ZP_11750292.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416548851|ref|ZP_11755065.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|418762505|ref|ZP_13318633.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418764312|ref|ZP_13320412.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418773202|ref|ZP_13329193.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418777929|ref|ZP_13333850.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779076|ref|ZP_13334982.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418785638|ref|ZP_13341468.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418791453|ref|ZP_13347215.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418791792|ref|ZP_13347544.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418797728|ref|ZP_13353411.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418801455|ref|ZP_13357089.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418807130|ref|ZP_13362696.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418811291|ref|ZP_13366825.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418826243|ref|ZP_13381486.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418829058|ref|ZP_13384050.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418836055|ref|ZP_13390945.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418842971|ref|ZP_13397777.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418847517|ref|ZP_13402271.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418851574|ref|ZP_13406284.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418855043|ref|ZP_13409705.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418859144|ref|ZP_13413751.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418862341|ref|ZP_13416883.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418865911|ref|ZP_13420377.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419788039|ref|ZP_14313738.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419792725|ref|ZP_14318356.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|62130060|gb|AAX67763.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194405242|gb|ACF65464.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|205340978|gb|EDZ27742.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205348083|gb|EDZ34714.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|224470301|gb|ACN48131.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|320088369|emb|CBY98129.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322716920|gb|EFZ08491.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|353074144|gb|EHB39906.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|363552625|gb|EHL36909.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363559478|gb|EHL43644.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363570670|gb|EHL54599.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|374355389|gb|AEZ47150.1| ATP-dependent DNA helicase recQ [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|392618248|gb|EIX00655.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392618380|gb|EIX00781.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392730245|gb|EIZ87491.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392736295|gb|EIZ93459.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392742663|gb|EIZ99749.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392743428|gb|EJA00500.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392751538|gb|EJA08487.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392753920|gb|EJA10840.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392755163|gb|EJA12077.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392768343|gb|EJA25099.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392769553|gb|EJA26284.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392779635|gb|EJA36299.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392780048|gb|EJA36707.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392780419|gb|EJA37072.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392802536|gb|EJA58748.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392805635|gb|EJA61758.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392806235|gb|EJA62346.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392807530|gb|EJA63600.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392808110|gb|EJA64163.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392817089|gb|EJA73006.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392822614|gb|EJA78420.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392830940|gb|EJA86582.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392836344|gb|EJA91928.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392840884|gb|EJA96417.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 615
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|161486779|ref|NP_807007.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161501914|ref|NP_457793.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|417337681|ref|ZP_12119750.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|417471048|ref|ZP_12167106.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353563828|gb|EHC30067.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353623757|gb|EHC72954.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
Length = 614
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 14 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 73
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 74 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 131
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 132 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 186
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 187 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 246
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 247 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 306
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 307 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 361
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 362 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 403
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 404 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 463
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 464 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 513
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 514 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 549
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 550 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 607
Query: 1023 I 1023
+
Sbjct: 608 V 608
>gi|78486335|ref|YP_392260.1| ATP-dependent DNA helicase RecQ [Thiomicrospira crunogena XCL-2]
gi|78364621|gb|ABB42586.1| ATP-dependent DNA helicase RecQ [Thiomicrospira crunogena XCL-2]
Length = 629
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 224/650 (34%), Positives = 352/650 (54%), Gaps = 79/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG +FR +Q EII+ ++G D FVLMPTGGGKSL YQ+PALI G +V+SPL++L
Sbjct: 39 QTVFGYDAFRSHQAEIIDDLVAGSDCFVLMPTGGGKSLCYQIPALIRLGTAIVVSPLIAL 98
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L + A + + +++ ++L +L++ + LLYV+PE++ L +
Sbjct: 99 MQDQVSALKANGVKAAYYNSTLDYESADQVLMQLHTG--QLDLLYVSPERL-----LNQT 151
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ +A IDEAHC+SQWGHDFRP+Y +G L+ FP P +ALTATA A+ ++
Sbjct: 152 FFQQLQQLPIALFAIDEAHCISQWGHDFRPEYSKIGQLRDYFPQVPFIALTATADAATRQ 211
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY----------GHFFLL--KE 613
D++Q L L + SF+RPN+ + + ++ LS+ G + L K
Sbjct: 212 DILQRLNLHQPHVHVSSFDRPNIRYTVFEKRQPMKQLLSFLDARPGHQESGIVYCLSRKR 271
Query: 614 FYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
V+L+ G++A YH + R V +Q+ +DEI+I+ ATVAFGMGI+KP+VRFV
Sbjct: 272 VEEVALQLQDKGYRAKAYHAGLPGDIRQTVHQQFIRDEIDIVVATVAFGMGIDKPNVRFV 331
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
+H+ LPK+IEGY+QE GRAGRDG S +L Y D + +H +
Sbjct: 332 VHYDLPKNIEGYYQETGRAGRDGLESEALLLYGAQDIVTARHFVEN-------------- 377
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
N + R +E+ L MV + E CRR + L +F E+ D+A C CD C
Sbjct: 378 -NPNEAQRRIESF--KLSCMVDFAEAQ-SCRRSVLLNYFDERTDNA-C-GNCDICLNPPR 431
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
F D T A+K + V Q F H+++V RG ++ +++ H++LS +G GK +
Sbjct: 432 FF--DATVAAQKALSCVYRLDQGFGVRHVIDVLRGMEHERIRQLNHQSLSTYGIGKEYSA 489
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
E I+R L+ +L+++++ SVLK+ + KA +++ G+ + L P
Sbjct: 490 VEWDSIIRQLIHLGYLVQDIQH-------YSVLKLTE-KAGDILKGKVALQLALP----R 537
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLS-AKLYSSLRMLRTLLVKEAG 969
K++KS T +N+ DL + + +LR LR +
Sbjct: 538 NKVAKS--------------------TRGGQKNKADLTADELERFETLRRLRKDIAD--S 575
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
E AY +FG+A L ++K+ P+ + ELL ING+G++K+ +YG L +
Sbjct: 576 EERPAYQVFGDAALIEMAKKCPQNDSELLAINGVGESKLERYGFEFLNQL 625
>gi|204930202|ref|ZP_03221179.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320606|gb|EDZ05808.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 615
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIIALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|161617078|ref|YP_001591043.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|195874257|ref|ZP_02701463.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|417329973|ref|ZP_12114685.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417344998|ref|ZP_12125224.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417353823|ref|ZP_12130421.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|417369413|ref|ZP_12140610.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417387010|ref|ZP_12151555.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417437013|ref|ZP_12161716.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|417477588|ref|ZP_12171587.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417514692|ref|ZP_12178426.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|417521684|ref|ZP_12183331.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|417535132|ref|ZP_12188708.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|418818528|ref|ZP_13373999.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418821071|ref|ZP_13376497.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|421882876|ref|ZP_16314125.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|25290797|pir||AH0917 ATP-dependent DNA helicase (EC 3.6.1.-) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504479|emb|CAD07934.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139300|gb|AAO70867.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161366442|gb|ABX70210.1| hypothetical protein SPAB_04911 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|195629971|gb|EDX48631.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|353563441|gb|EHC29792.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353563459|gb|EHC29807.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353584285|gb|EHC44436.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353601643|gb|EHC57226.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353613150|gb|EHC65322.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353633055|gb|EHC79959.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353637613|gb|EHC83386.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353640818|gb|EHC85699.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Uganda str. R8-3404]
gi|353657336|gb|EHC97802.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357953490|gb|EHJ80012.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|379987516|emb|CCF86398.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|392785390|gb|EJA41969.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392791354|gb|EJA47842.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
Length = 609
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|376003245|ref|ZP_09781059.1| ATP-dependent DNA helicase [Arthrospira sp. PCC 8005]
gi|375328405|emb|CCE16812.1| ATP-dependent DNA helicase [Arthrospira sp. PCC 8005]
Length = 739
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 225/656 (34%), Positives = 349/656 (53%), Gaps = 80/656 (12%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
+ L+ K+ FG SFRP Q+EII + DV +MPTGGGKSL +QLPAL+ PG+TLV
Sbjct: 12 QSLQQCLKQYFGYDSFRPGQQEIIEQVLQKRDVLAIMPTGGGKSLCFQLPALLKPGLTLV 71
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
+SPL++L+QDQ+ L I ATFL+ ++ E ++ RE + KLLYV PE++
Sbjct: 72 VSPLIALMQDQVEALKDNGIGATFLNSTVDIHEARQ--RESAILQGQIKLLYVAPERLL- 128
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
S L L+ L A ++ +VIDEAHCVS WGHDFRP+Y+ + ++ ++P+ P +ALTAT
Sbjct: 129 SPQFLEFLDRLEAAFGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTAT 188
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERLQVGLSYGHFFLL- 611
AT V+ D+++ + L + SF R NL+ ++ + L+V S ++
Sbjct: 189 ATERVRFDIIKQIVLKQPYVHVASFYRSNLYYQVIPKQPKKRFTQLLKVIESMSGSGIIY 248
Query: 612 ----KEFYVVSLECGH---KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
K V+L+ H +A YH + + R ++ +D++ II AT+AFGMGI+K
Sbjct: 249 CSSRKRVEEVALKLQHHNIQALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDK 308
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
PDVRFVIH+ LPKS+E Y+QE GRAGRDGQ + C+L++SY D ++++I Q
Sbjct: 309 PDVRFVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQ-------- 360
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
P + +A + L +++ Y E+ +CR +QL +FGE+F +C TCDN
Sbjct: 361 KPDVDEQRIAR---------QQLRQVIDYAES-TECRHRIQLRYFGEEF-PGNC-GTCDN 408
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C + +D T A K + V ++F S+I++V RG+ NQ V H+ LS +
Sbjct: 409 CCHQRPM--EDWTVEAMKFLSCVARCRERFGMSYIIDVLRGAKNQRVLSRGHDKLSTYNI 466
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ E + R L+ + L + +D Y S+LK+N ++ RQ V
Sbjct: 467 GRDRTVDEWKMLARSLLHQGLLDQ---TNDGY----SILKLNNLSWE--VMKRQREV--- 514
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK-LYSSLRMLRTL 963
K++ R+ PQ + K L LR +R
Sbjct: 515 ------------------------KIAVVRDR--QLPQQTWSMAADVKMLLEHLRQVRKQ 548
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
L + + Y IF ++TL +++ P+T+++LL ++G+ KV YG + L I
Sbjct: 549 LADQ--NDIAPYKIFSDSTLGLMARERPQTKQDLLRLSGVTAYKVQHYGQQFLNAI 602
>gi|16272669|ref|NP_438887.1| ATP-dependent DNA helicase [Haemophilus influenzae Rd KW20]
gi|260579821|ref|ZP_05847651.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae RdAW]
gi|2500112|sp|P71359.1|RECQ_HAEIN RecName: Full=ATP-dependent DNA helicase RecQ
gi|1573732|gb|AAC22387.1| ATP-dependent DNA helicase (recQ) [Haemophilus influenzae Rd KW20]
gi|260093105|gb|EEW77038.1| ATP-dependent DNA helicase RecQ [Haemophilus influenzae RdAW]
Length = 619
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 345/651 (52%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ V RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|146313606|ref|YP_001178680.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. 638]
gi|145320482|gb|ABP62629.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. 638]
Length = 609
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/650 (32%), Positives = 337/650 (51%), Gaps = 80/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A ++ +QQ+++ + + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACINSTQTREQQQDVMAGCRTG--QIRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + ++
Sbjct: 135 LAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQ 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPFSQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQTRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
G++L+ L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 357 ---QGQMLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDVCLDPP 407
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G GK +
Sbjct: 408 KQYDGLMDARKALSTIGRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGKEQSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
I+R L+ F + + + S L++ ++ A ++ G + L P I
Sbjct: 468 HWVSIIRQLIHLGFATQNIAQ-------HSALQLTEA-ARPVLRGDIELQLAVPRVIAL- 518
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
P Q N KL++ LR LR + E E
Sbjct: 519 -------------------------KPRVMQKSYGGNYDRKLFAKLRKLRKAIADE--EN 551
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ Y +F +ATL +++++P + E+L +NG+G K+ ++G + I S
Sbjct: 552 IPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIRS 601
>gi|340027066|ref|ZP_08663129.1| ATP-dependent DNA helicase RecQ [Paracoccus sp. TRP]
Length = 678
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 216/662 (32%), Positives = 333/662 (50%), Gaps = 83/662 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG SFRP Q EI+NA SG DV +MPTGGGKSL YQLPAL+ G+T+VISPL++L
Sbjct: 8 RQVFGFDSFRPGQEEIVNAVASGRDVLAIMPTGGGKSLCYQLPALMRDGLTVVISPLIAL 67
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L +A + A L+ E E+LR + + + +LLY+ PE++A +
Sbjct: 68 MRDQVHALTEAGVAAAALTSGNSDEENSEVLRAMAAR--ELRLLYMAPERLASGATV--- 122
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ R + I +DEAHCVSQWGHDFRPDY +G L++ + P+ A TATA A ++
Sbjct: 123 --PMLRRAGVQAIAVDEAHCVSQWGHDFRPDYLRVGELRRVL-SVPLAAFTATADAETRD 179
Query: 566 DVVQAL-GLVNCIIFRQSFNRPNLWMDCE------------KVAERLQVGLSYGHFFLLK 612
++VQ L F + F+RPN+ + + A R Q G+ Y
Sbjct: 180 EIVQRLFDGAQPQTFLRGFDRPNIHLAFQPKDGPRRQILDFAAARRGQSGIIYCGTRAKT 239
Query: 613 EFYVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
E +L + G A YHG ++ R V+ ++ +++ I+ ATVAFGMGI+KPD+R+V
Sbjct: 240 ETLAAALNQSGLAATAYHGGMEADARREVEARFQREDGLIVVATVAFGMGIDKPDIRWVA 299
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKSIE Y+QE GR GRDG + + Y D + I + +A H R
Sbjct: 300 HADLPKSIEAYYQEIGRGGRDGAPAETLTLYGPDDIRLRRGQIDESLAPPERKAADHARL 359
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
N ++ E CRR+ L +FGEK A C CD C
Sbjct: 360 NA----------------LLGLAEA-TGCRRIALLRYFGEKA-VAPCG-NCDICDDPPEC 400
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
D T+ A+K++ + TGQ + S HI++V G++ + V+ H+ L G G+ L+K
Sbjct: 401 F--DATEAAQKVLSAILRTGQTYGSGHIIDVLTGTMTERVQARGHDHLPTFGVGRDLSKP 458
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS- 910
+ ++R ++ D + + S+ +G ++ L AH ++ G + + LR + +
Sbjct: 459 QWQAVIRQMLGLDLIRPD---SERHGGLAITLA-----AHPVLRGEERITLRRDTMARAR 510
Query: 911 -TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ +S V P D P L+S+L+ R L + A
Sbjct: 511 PAVVVRSQVDP--------------EDEP--------------LFSALKAKRRALAEAAR 542
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKT 1029
V AY IF + TLQ +++ P T +E+ +NG+G K+ YG L+ I + +
Sbjct: 543 --VPAYVIFPDRTLQEMARLRPGTLDEMARVNGVGAKKLESYGEEFLQVIAKDVPPMHPA 600
Query: 1030 DK 1031
+
Sbjct: 601 RR 602
>gi|377579442|ref|ZP_09808410.1| ATP-dependent DNA helicase RecQ [Escherichia hermannii NBRC 105704]
gi|377539235|dbj|GAB53575.1| ATP-dependent DNA helicase RecQ [Escherichia hermannii NBRC 105704]
Length = 609
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 217/650 (33%), Positives = 337/650 (51%), Gaps = 80/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q IIN + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIINTVLDGRDCLVVMPTGGGKSLCYQIPALVKAGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ + K +LLY+ PE++ D L Q
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQTRDEQQAVMAGCRTG--KIRLLYIAPERLM-LDNFLDQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFR +Y LG L+ +FP+ P +ALTATA + +
Sbjct: 135 LIHWNP----VMLAVDEAHCISQWGHDFRREYALLGQLRDRFPDVPFMALTATADETTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVNLLGLHDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENDVRANVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
G++ + L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 357 ---PGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPP 407
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 408 KQYDGLLDARKALSTIGRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
I+R L+ F + + + S L++ ++ VLR A+
Sbjct: 468 HWVSIIRQLIHMGFATQNIAQ-------HSALQLTEAA---------RPVLRGEVAL--- 508
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
KL+ V K P Q N KL++ LR LR + E E
Sbjct: 509 KLAVPRVIALK---------------PRMAQKSYGGNYDRKLFAKLRKLRKAIADE--EN 551
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ Y +F +ATL +++++P + E+L ING+G K+ ++G + I S
Sbjct: 552 IPPYVVFNDATLIEMAEQMPLSAGEMLGINGVGTRKLERFGKEFMALIRS 601
>gi|418465350|ref|ZP_13036287.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359756282|gb|EHK90441.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 629
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 226/648 (34%), Positives = 344/648 (53%), Gaps = 82/648 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q+EIINA ++G D V+M TG GKSL YQ+PAL G TLV+SPL+SL++
Sbjct: 38 VFGYQSFRKGQQEIINAVLNGQDCLVIMATGTGKSLCYQIPALCFDGTTLVVSPLISLMK 97
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A +L+ + EQQ++ S + KLLY++PEKV S Q
Sbjct: 98 DQVDQLRANGVAADYLNSTQTFEEQQQVQNRAISG--QLKLLYLSPEKVMTSSFF--QFI 153
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
SL +A IDEAHC+SQWGHDFRP+Y LG LK FPN P++ALTATA + ++D+
Sbjct: 154 SLCQVSFIA---IDEAHCISQWGHDFRPEYTQLGGLKGSFPNVPIMALTATADQTTQQDI 210
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEFY 615
+Q L L + SF+RPN+ + EK +A++ + G+ Y + E
Sbjct: 211 LQNLRLNRPHFYVGSFDRPNIRYTLVEKFKPMEQLCRFVLAQKGKSGIVYCNSRNKVERI 270
Query: 616 VVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+L C G +AA YH ++ R VQ+ + +D I ++ AT+AFGMGINK +VRFV H
Sbjct: 271 AETL-CNKGVRAAAYHAGMENGLREKVQRDFQRDNIQVVVATIAFGMGINKSNVRFVAHF 329
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LP+SIE Y+QE GRAGRD + VL+Y +D++ + M+ + P TP
Sbjct: 330 DLPRSIESYYQETGRAGRDDLPAEAVLFYDPADYVWLNKMLM-----EKPETP------- 377
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
R +E ++ L+ + CRRL+ L +FGE H + C NC +
Sbjct: 378 ---QRQIE---QHKLQAIGEFAESQTCRRLVLLNYFGE-----HRQMPCQNCDICLDPPK 426
Query: 794 K--DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
K + D A+K++ + TGQ + + +++ V RG NQ +++ RHE LS++G GK +
Sbjct: 427 KYNGLLD-AQKIMSAIYRTGQCYGAHYVIAVLRGMNNQKIREQRHEQLSVYGIGKEHSTE 485
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR LV + + + G + L++ ++ A ++ G + L
Sbjct: 486 YWQSVLRQLVHLGLVRQ------IIGEYGNTLQLTEN-AKPILRGEAPLEL--------- 529
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
TP S+++ + TP D +L A+ LR LR + + E
Sbjct: 530 ------ATPRLSSIVTTAM------TPKSAVGSYDKDLFAR----LRFLRKQIADK--EN 571
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y +F +ATLQ +++ P + E+L+ING+G K+ ++G L I
Sbjct: 572 IPPYIVFNDATLQEMAQYQPVSNIEMLQINGVGAIKLERFGQAFLALI 619
>gi|194735447|ref|YP_002116885.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194710949|gb|ACF90170.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
Length = 615
Score = 337 bits (864), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 217/661 (32%), Positives = 348/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LELGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N LLA +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP-VLLA---VDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRQDIIRQLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|374261468|ref|ZP_09620050.1| hypothetical protein LDG_6438 [Legionella drancourtii LLAP12]
gi|363538095|gb|EHL31507.1| hypothetical protein LDG_6438 [Legionella drancourtii LLAP12]
Length = 607
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 228/648 (35%), Positives = 345/648 (53%), Gaps = 77/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG SFR Q +II ++G+DV VLMPTGGGKSL YQ+P+L+ PG+ +V+SPL++L
Sbjct: 19 KEYFGFDSFRNPQEDIIKDVIAGNDVLVLMPTGGGKSLCYQIPSLVRPGVGIVVSPLIAL 78
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A + + ++ E +++L +L++ + LLY+ PE++ + L R
Sbjct: 79 MEDQVTALRLQGIRAAYYNSSLTSEEAKKVLAQLHN--AELDLLYIAPERLISASFLERL 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
E ++ IDEAHC+SQWGHDFRP+Y LG+LK+ FP P++ALTATA ++
Sbjct: 137 QECH-----ISLFAIDEAHCISQWGHDFRPEYAALGLLKEHFPTIPIIALTATADKQTRQ 191
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMD-------CEKVAERLQ-VGLSYGHFFLLKEFYVV 617
D+V L + SFNRPN+ +++ + LQ V G + V
Sbjct: 192 DIVVKLNYTP-KKYIASFNRPNIHYKVVPKTNAAKQLNQFLQSVEQQSGIIYCGTRNSVE 250
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL + G KA YH + +R VQ + D I+I+ AT+AFGMGI+KP+VRFV H
Sbjct: 251 SLAEKLQDMGFKARAYHAGLSHKERKEVQNLFRYDRIDIVVATIAFGMGIDKPNVRFVAH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
H LPK+IEGY+QE GRAGRDG + +L Y +D R++ I TP
Sbjct: 311 HDLPKNIEGYYQETGRAGRDGLPAQALLLYDAADSARLRSWIIN--------TP------ 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ R +ETN N M+++ E CRR + L +F E DS C K CD C I
Sbjct: 357 -LDEQRRVETNKLN--HMLAFAEAS-HCRRQILLRYFDEPCDS-EC-KYCDVCDNPP--I 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T+ A+K + V Q + ++ +EV RGS ++ +K+ HE LS G GK +
Sbjct: 409 TADATEDAQKFLSCVYRLRQNYGLTYTIEVLRGSASEKIKQFGHEQLSTFGIGKDKSPHY 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++ L+ +D+ +++ + VLK+ Q KA L+ G + + L P+ N K
Sbjct: 469 WKQLAWQLIHKDYCFQDIAHFN-------VLKLTQ-KAIPLLKGEEKIALTIPN--NDLK 518
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
SK + SG+ S + P L+ LR LR L E E
Sbjct: 519 GSKKKTKERR----SGESS----NNP--------------LFEVLRALRRKLADE--ENK 554
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ IF +ATL +++ P+ E+LL + G+G+ K++ YG L+ ++
Sbjct: 555 PPFMIFSDATLHAMTEAKPQNTEQLLAVPGVGQHKLAHYGNHFLKALQ 602
>gi|417542867|ref|ZP_12194198.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353657835|gb|EHC98179.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
Length = 609
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|354683879|gb|AER35068.1| ATP-dependent DNA helicase [Dictyostelium lacteum]
Length = 748
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/440 (39%), Positives = 262/440 (59%), Gaps = 32/440 (7%)
Query: 375 FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALIC-- 432
F W + + NK VFGN SFR Q+E INA +S D F+ +PTGGGKSL +QLPALI
Sbjct: 268 FEWDRVVSECNKMVFGNDSFRRLQKEAINAILSNKDTFISLPTGGGKSLCFQLPALIGKD 327
Query: 433 PGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVT 492
G+ +VISPL++L+QDQ+ L +P L+ + +E++ + +ELN+ C KLLYVT
Sbjct: 328 AGVNIVISPLLALMQDQLSKLKSLGVPVETLNSQLSISERKRVFQELNNINCSIKLLYVT 387
Query: 493 PEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPV 552
PE+ + SD L +++ R L R+++DEAH +S+WGHDFRP Y+ L + +++FP P+
Sbjct: 388 PERFSGSD-FQEILVNIHDRGQLKRLIVDEAHSISEWGHDFRPSYRRLSLFRKQFPGLPI 446
Query: 553 LALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLK 612
+ALTATAT V++D+ +L + + + R SF R NL ++ Q L+ + ++ K
Sbjct: 447 VALTATATDRVEKDIKSSLQMRSIVNIRSSFMRSNLIYQVRLKSQDSQSVLTDIYAYISK 506
Query: 613 EF--------YVVSLEC----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICA 654
++ + +C G FYH S+ P+QR +Q W++ ++C
Sbjct: 507 KYPKESGIIYCATTKDCEIISEYLSSRGLDTCFYHASLKPSQRIQLQNDWTEGRFKVVCT 566
Query: 655 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMI 714
T+AFGMGI+K + RFVIHH++P+SIE Y+Q+ GRAGRDGQ S C+LYYS D I +K ++
Sbjct: 567 TIAFGMGIDKSNTRFVIHHTIPQSIEAYYQQTGRAGRDGQTSDCILYYSKFDLILLKKLM 626
Query: 715 S----QGVAEQSPFT----PGHNRFNVANSGRVLETNTENLL-RMVSYCENDVDCRRLLQ 765
+ + + PF P + + L+ N ++L MVS+C N +CRR+
Sbjct: 627 ANSDKRTKLSKEPFQDEVYPDETDEDPEEILKQLQANKNDMLDNMVSFCVNTKECRRVSL 686
Query: 766 LVHFGEKFDSAHCKKTCDNC 785
L +F E+ S CK CDNC
Sbjct: 687 LKYFSEQ--SKPCKTNCDNC 704
>gi|417377000|ref|ZP_12146033.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353591293|gb|EHC49598.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
Length = 609
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGRENSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|161505534|ref|YP_001572646.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|160866881|gb|ABX23504.1| hypothetical protein SARI_03699 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-]
Length = 615
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 215/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMTGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|168233892|ref|ZP_02658950.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|416427302|ref|ZP_11693481.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416434870|ref|ZP_11697891.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416436865|ref|ZP_11698533.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416447482|ref|ZP_11705890.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416454710|ref|ZP_11710431.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416457489|ref|ZP_11712204.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416464152|ref|ZP_11716248.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416475377|ref|ZP_11720600.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416489276|ref|ZP_11726106.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416496572|ref|ZP_11729198.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416507871|ref|ZP_11735697.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416517693|ref|ZP_11739594.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416547105|ref|ZP_11754394.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416562017|ref|ZP_11761863.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416572797|ref|ZP_11767461.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416574873|ref|ZP_11768042.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416587458|ref|ZP_11776068.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416594725|ref|ZP_11780542.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416596084|ref|ZP_11781178.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416606167|ref|ZP_11787562.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416613349|ref|ZP_11791983.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416624004|ref|ZP_11797748.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416634922|ref|ZP_11802814.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416639346|ref|ZP_11804480.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416660772|ref|ZP_11815207.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416668613|ref|ZP_11819000.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416678400|ref|ZP_11822627.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416689502|ref|ZP_11825608.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416704588|ref|ZP_11830342.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416710675|ref|ZP_11834703.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416717787|ref|ZP_11840028.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416723406|ref|ZP_11844118.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416728964|ref|ZP_11847700.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416742430|ref|ZP_11855812.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416748208|ref|ZP_11858599.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416759473|ref|ZP_11864304.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416764210|ref|ZP_11867845.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416772766|ref|ZP_11873465.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418486071|ref|ZP_13055045.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418507163|ref|ZP_13073488.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|205332102|gb|EDZ18866.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|322613033|gb|EFY09984.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617379|gb|EFY14279.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625629|gb|EFY22451.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627052|gb|EFY23845.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631232|gb|EFY27995.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638265|gb|EFY34964.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642799|gb|EFY39386.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646959|gb|EFY43461.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650346|gb|EFY46759.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656363|gb|EFY52657.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657588|gb|EFY53858.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665999|gb|EFY62180.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666738|gb|EFY62915.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671019|gb|EFY67149.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679274|gb|EFY75326.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681678|gb|EFY77705.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685995|gb|EFY81983.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192621|gb|EFZ77849.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196487|gb|EFZ81637.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203761|gb|EFZ88782.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323210733|gb|EFZ95609.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215901|gb|EGA00634.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221394|gb|EGA05812.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227588|gb|EGA11744.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231773|gb|EGA15884.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236188|gb|EGA20265.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239575|gb|EGA23623.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244329|gb|EGA28337.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249574|gb|EGA33486.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250334|gb|EGA34220.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256541|gb|EGA40272.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259761|gb|EGA43394.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265169|gb|EGA48667.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268402|gb|EGA51874.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|363553085|gb|EHL37357.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363559660|gb|EHL43813.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363572666|gb|EHL56556.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|363573470|gb|EHL57350.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|366054404|gb|EHN18759.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366081731|gb|EHN45672.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
Length = 615
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPVSAGEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|424818190|ref|ZP_18243341.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii ECD227]
gi|325499210|gb|EGC97069.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii ECD227]
Length = 609
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EIIN +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIINTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|389842669|ref|YP_006344753.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii ES15]
gi|387853145|gb|AFK01243.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii ES15]
Length = 609
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 343/651 (52%), Gaps = 78/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+A + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTIVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ +L + + +LLY+ PE++ + +
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREEQQAVLAGCRTG--QVRLLYIAPERLMMDNFI--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++L +L A + +DEAHC+SQWGHDFRP+Y LG L+ +FP P +ALTATA + +
Sbjct: 133 -DTLGYWDL-AMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE----EKAP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A C CD C +
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPR 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ ++
Sbjct: 409 RYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++R L+ + + + + S L++ ++ A + G ++L P + + K
Sbjct: 469 WVSVIRQLIHLGVVTQNIAQ-------HSALQLTEA-ARPFLRGEAPLMLAVPR-VAALK 519
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 520 -------------------------PRVAQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L ING+G K+ ++G + I +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIRQHV 603
>gi|425307629|ref|ZP_18697292.1| ATP-dependent DNA helicase RecQ [Escherichia coli N1]
gi|408224965|gb|EKI48662.1| ATP-dependent DNA helicase RecQ [Escherichia coli N1]
Length = 609
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V+ Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVLPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|417228931|ref|ZP_12030689.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0959]
gi|386208266|gb|EII12771.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0959]
Length = 611
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLILISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|194469151|ref|ZP_03075135.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|416649609|ref|ZP_11809981.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|418492957|ref|ZP_13059431.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418496841|ref|ZP_13063270.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418499706|ref|ZP_13066110.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418506075|ref|ZP_13072415.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418526484|ref|ZP_13092460.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|194455515|gb|EDX44354.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|366054478|gb|EHN18832.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366056408|gb|EHN20732.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366066485|gb|EHN30652.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366070443|gb|EHN34553.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366828694|gb|EHN55575.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205603|gb|EHP19111.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
Length = 609
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSAGEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|452122263|ref|YP_007472511.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|451911267|gb|AGF83073.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 609
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 347/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIIALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|209527293|ref|ZP_03275803.1| ATP-dependent DNA helicase RecQ [Arthrospira maxima CS-328]
gi|209492281|gb|EDZ92626.1| ATP-dependent DNA helicase RecQ [Arthrospira maxima CS-328]
Length = 739
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 225/656 (34%), Positives = 348/656 (53%), Gaps = 80/656 (12%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
+ L+ K+ FG SFRP Q+EII + DV +MPTGGGKSL +QLPAL+ PG+TLV
Sbjct: 12 QSLQQCLKQYFGYDSFRPGQQEIIEQVLQKRDVLAIMPTGGGKSLCFQLPALLKPGLTLV 71
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
+SPL++L+QDQ+ L I ATFL+ ++ E ++ RE + KLLYV PE++
Sbjct: 72 VSPLIALMQDQVEALKDNGIGATFLNSTVDIHEARQ--RESAILQGQIKLLYVAPERLL- 128
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
S L L+ L A ++ +VIDEAHCVS WGHDFRP+Y+ + ++ ++P+ P +ALTAT
Sbjct: 129 SPQFLEFLDRLEAAFGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTAT 188
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERLQVGLSYGHFFLL- 611
AT V+ D+++ + L + SF R NL+ ++ + L+V S ++
Sbjct: 189 ATERVRFDIIKQIVLKQPYVHVASFYRSNLYYQVIPKQPKKRFPQLLKVIESMSGSGIIY 248
Query: 612 ----KEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
K V+L+ H A YH + + R ++ +D++ II AT+AFGMGI+K
Sbjct: 249 CSSRKRVEEVALKLQHNNIPALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDK 308
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
PDVRFVIH+ LPKS+E Y+QE GRAGRDGQ + C+L++SY D ++++I Q
Sbjct: 309 PDVRFVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQ-------- 360
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
P + +A + L +++ Y E+ +CR +QL +FGE+F +C TCDN
Sbjct: 361 KPDVDEQRIAR---------QQLRQVIDYAES-TECRHRIQLRYFGEEF-PGNC-GTCDN 408
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C + +D T A K + V ++F S+I++V RG+ NQ V H+ LS +
Sbjct: 409 CCHQRPM--EDWTVEAMKFLSCVARCRERFGMSYIIDVLRGAKNQRVLSRGHDKLSTYNI 466
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ E + R L+ + L + +D Y S+LK+N ++ RQ V
Sbjct: 467 GRDRTVDEWKMLARSLLHQGLLDQ---TNDGY----SILKLNNLSWE--VMKRQREV--- 514
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK-LYSSLRMLRTL 963
K++ R+ PQ + K L LR +R
Sbjct: 515 ------------------------KIAVVRDR--QLPQQTWSMAADVKMLLEHLRQVRKQ 548
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
L + + Y IF ++TL +++ P+T+++LL ++G+ KV YG + L I
Sbjct: 549 LADQ--NDIAPYKIFSDSTLGLMARERPQTKQDLLRLSGVTAYKVQHYGQQFLNAI 602
>gi|170718152|ref|YP_001785180.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 2336]
gi|168826281|gb|ACA31652.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 2336]
Length = 624
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 222/663 (33%), Positives = 343/663 (51%), Gaps = 90/663 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q E+I AT++ D V+M TGGGKSL YQ+PAL G+TLVISPL+SL++
Sbjct: 32 VFGYQSFRKGQLEVIEATLAKKDSLVIMATGGGKSLCYQIPALCFSGLTLVISPLISLMK 91
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ LL I A +L+ + + +QQ + + S K KLLY++PEK +
Sbjct: 92 DQVDQLLANGINADYLNSSQTFEQQQLVQNKAMSG--KLKLLYISPEKALTTSFF----- 144
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
+ ++ I +DE HC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++D+
Sbjct: 145 HFISHCKVSFIAVDETHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADQATRQDI 204
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKEFY 615
+ L L N I+ SF+RPN+ + EK Q+ G+ Y + E
Sbjct: 205 LIHLKLSNPHIYIGSFDRPNIRYSLVEKFKPMEQLSQFIAKQKGKNGIIYCNSRNKVERI 264
Query: 616 VVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHS 674
SL + G A YH + QR FVQ+ + D + I+ AT+AFGMGINK +VRFV H
Sbjct: 265 AESLRQKGISAEAYHAGMSNEQREFVQRAFQHDNVQIVVATIAFGMGINKSNVRFVAHFD 324
Query: 675 LPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVA 734
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q V + P P
Sbjct: 325 LPRSIEAYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKVLLEKPDIPQR------ 373
Query: 735 NSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEK 794
+ L + + E+ + CRRL+ L +FGE + +K C+NC +K
Sbjct: 374 ------QIELHKLQSIGEFAESQI-CRRLVLLNYFGE-----YQQKPCNNCDICLDPPKK 421
Query: 795 -DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D A+K++ + GQ+F + +I+ V RGS NQ +K+++H+ LS+ G GK ++
Sbjct: 422 YDGLVDAQKVMSAIYRVGQRFGAMYIIAVLRGSQNQKIKEYQHDKLSVFGIGKDRSREYW 481
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
++R L+ + + +I N+ L+ ++S +
Sbjct: 482 QSVIRQLIHLGLIKQ-------------------------VIDHFNITLQL--TLDSLPI 514
Query: 914 SKSD-----VTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+ + TP S+ + P R T N L++ LR LR + +
Sbjct: 515 LRGEQPLQLATPRISSITNAVTIPKRAVT----------NYDKDLFARLRFLRKKIADK- 563
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYK 1028
E + Y +F +ATLQ +++ P TE+E+++ING+G K+ ++ L I+ +F++
Sbjct: 564 -ENIPPYIVFNDATLQEMAQYQPITEQEMIQINGVGDIKLKRFAQPFLALIKE--HQFFR 620
Query: 1029 TDK 1031
T K
Sbjct: 621 TTK 623
>gi|342865489|gb|EGU71814.1| hypothetical protein FOXB_17670 [Fusarium oxysporum Fo5176]
Length = 1563
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 295/559 (52%), Gaps = 68/559 (12%)
Query: 377 WTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
W+ +++ + F FR NQ E IN T+ G D FVLMPTGGG IT
Sbjct: 826 WSPEVQRMLEDRFRMKGFRHNQLEAINETLGGKDAFVLMPTGGG--------------IT 871
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL+QDQ+ H+ + A +G +++++ EK
Sbjct: 872 IVVSPLLSLMQDQVDHMKALGVQAVAFNGEYSAEYKRQVMTAF--------------EKR 917
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
+ D + L +L L+RIVIDEAHCVSQWGHDFRPDY+ LG ++QK+P PV+ALT
Sbjct: 918 SPEDYIELLLRTLYDNGKLSRIVIDEAHCVSQWGHDFRPDYKTLGEVRQKYPGVPVMALT 977
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKVAERL------Q 600
ATAT +V D+ LG+ NC F QSFNRPNL + +++A + Q
Sbjct: 978 ATATQNVIVDIRHILGMDNCQTFSQSFNRPNLHYEVRGKTTNAKCMDEIASLIMSKYANQ 1037
Query: 601 VGLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
G+ Y E SL G A YH +DP ++ VQ W + ++ I+ AT+AFG
Sbjct: 1038 SGIVYTVSRKNAEKVAESLSIQGITARHYHAGLDPQEKVEVQTSWQQGQVKIVVATIAFG 1097
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGI+KPDVRFVIHH LPK++EGY+QE GRAGRDG S C+L+Y D +K +I+ G
Sbjct: 1098 MGIDKPDVRFVIHHGLPKTLEGYYQETGRAGRDGDPSDCILFYGKQDIRILKKLIADGE- 1156
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
G+N E L R+ ++C+N DCRR+ L +FGE F +A C+
Sbjct: 1157 -------GNNEQK--------ERQMSMLNRVTAFCDNKSDCRRVEILRYFGEDFSAAQCR 1201
Query: 780 KTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETL 839
KTCDNC F +++ ++ A + +V+ ++ ++ ++ G +Y +
Sbjct: 1202 KTCDNCRAGLIFEQREFSEYAIAAIRVVQ-AQRRITTVQCADILMG--RKYPPYEARRSE 1258
Query: 840 SLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQN 899
+G K+L K E R+L L+ E E + + +G LK+ S H + G++
Sbjct: 1259 DWYGMAKNLKKHELLRVLDKLLAEKAFHENNQVGN-HGMAIQYLKLG-STYHLFLSGQRK 1316
Query: 900 VVL--RFPSAINSTKLSKS 916
++L + P + KLSKS
Sbjct: 1317 LMLSIQVPKEGTTNKLSKS 1335
>gi|156935855|ref|YP_001439771.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii ATCC BAA-894]
gi|424801979|ref|ZP_18227521.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 696]
gi|429119492|ref|ZP_19180209.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 680]
gi|156534109|gb|ABU78935.1| hypothetical protein ESA_03738 [Cronobacter sakazakii ATCC BAA-894]
gi|423237700|emb|CCK09391.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 696]
gi|426326019|emb|CCK10946.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 680]
Length = 609
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 343/651 (52%), Gaps = 78/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+A + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTIVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ +L + + +LLY+ PE++ + +
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREEQQAVLAGCRTG--QVRLLYIAPERLMMDNFI--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++L +L A + +DEAHC+SQWGHDFRP+Y LG L+ +FP P +ALTATA + +
Sbjct: 133 -DTLGYWDL-AMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE----EKAP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A C CD C +
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPR 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ ++
Sbjct: 409 RYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++R L+ + + + + S L++ ++ A + G ++L P + + K
Sbjct: 469 WVSVIRQLIHLGVVTQNIAQ-------HSALQLTEA-ARPFLRGEAPLMLAVPR-VAALK 519
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 520 -------------------------PRVAQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L ING+G K+ ++G + I +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIREHV 603
>gi|255535742|ref|YP_003096113.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium 3519-10]
gi|255341938|gb|ACU08051.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium 3519-10]
Length = 732
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 217/660 (32%), Positives = 356/660 (53%), Gaps = 81/660 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG +F+ +Q+EII + G D+FVLMPTGGGKSL YQLPAL+ G +V+SPL++L
Sbjct: 13 KKYFGFSTFKGHQQEIIQNLLEGQDIFVLMPTGGGKSLCYQLPALMSEGTAIVVSPLIAL 72
Query: 446 IQDQI---MHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
+++Q+ L A L+ ++ T+ +++ ++ + + KLLYV PE + K D L
Sbjct: 73 MKNQVDAVNGLSSDQGVAHVLNSSLNKTQIKQVFDDIRA--GRTKLLYVAPESLIKEDYL 130
Query: 503 --LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L++++ ++ + IDEAHC+S+WGHDFRP+Y+ L ++ K + PV+ALTATAT
Sbjct: 131 EFLKEVK-------ISFVAIDEAHCISEWGHDFRPEYRNLKLIIDKIADVPVIALTATAT 183
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLW--------MDCEKV----AERLQVGLSYG-H 607
V++D+ + LG+ N ++F++SFNRPNL+ +D E V A + + G+ Y
Sbjct: 184 PKVQDDIQKTLGMSNALVFKESFNRPNLYYEVRPKVNIDREIVKFINARKGKSGIVYCLS 243
Query: 608 FFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
++EF + G A YH +D R Q ++ +E ++I AT+AFGMGI+KPDV
Sbjct: 244 RRKVEEFAQLLQVNGINALPYHAGLDQKTRVMNQDKFLMEEADVIVATIAFGMGIDKPDV 303
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFVIH+ +PKS+E Y+QE GRAGRDG C+ +Y D +++ ++Q P
Sbjct: 304 RFVIHYDIPKSLESYYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQ--------KPV 355
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH--CKKTCDNC 785
R E + L + Y E + RR L +FGE+FD + + CDN
Sbjct: 356 SER----------EIGLQLLNEVQGYAETSM-SRRQYILYYFGEQFDPVNGAGARMCDNF 404
Query: 786 SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
+ + KD T K+++ LVK ++F + ++ V G N K ++ ETL G G
Sbjct: 405 TNPPTL--KDATKELKQVLSLVKELEEKFKTKDLISVIVGKENSVTKSYKLETLKQFGFG 462
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
++ ++ I+R +++FL +++ + YG VLK+ KA +I G + P
Sbjct: 463 RNQPENFWKSIIRQATVQNFLQKDI---ETYG----VLKIT-DKAQKVIDGTD----KNP 510
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLV 965
I + L+ ++ D+ QN V L L+ +L+ L +
Sbjct: 511 FLIAEDR--------------EYNLAQTKADSDQLEQNSV---LDEVLFKNLKDLTVRVG 553
Query: 966 KEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
++ GV Y +F + +L+ ++ + P T EE+ +I G+G+ K +YG + I++ + E
Sbjct: 554 RK--HGVPPYTVFMDPSLEDMTVQYPTTIEEMSKIYGVGEGKAKRYGKDFADYIKNYVAE 611
>gi|300024077|ref|YP_003756688.1| ATP-dependent DNA helicase RecQ [Hyphomicrobium denitrificans ATCC
51888]
gi|299525898|gb|ADJ24367.1| ATP-dependent DNA helicase RecQ [Hyphomicrobium denitrificans ATCC
51888]
Length = 728
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 225/671 (33%), Positives = 341/671 (50%), Gaps = 77/671 (11%)
Query: 383 ANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPL 442
A + VFG FRP Q +II+ + G D LMPTGGGKSL YQ+P+L+ G +V+SPL
Sbjct: 25 AKLEDVFGYKGFRPLQGDIIDTVLRGGDCLALMPTGGGKSLCYQIPSLVRRGTGIVVSPL 84
Query: 443 VSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVL 502
++L+QDQ+ L + A FL+ + + Q +I R+ +D LLYV PE++ + L
Sbjct: 85 IALMQDQVDALKDLGVKAAFLNSTQDRSTQDQIERQFAAD--ALDLLYVAPERLVQERTL 142
Query: 503 LRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATAS 562
SL +A IDEAHCVSQWGHDFRP+Y+ L IL Q+FP P +ALTATA
Sbjct: 143 -----SLLELSDIALFAIDEAHCVSQWGHDFRPEYRQLKILAQRFPRVPRIALTATADER 197
Query: 563 VKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVA-----ERLQVGLSYGHFFLLKEFYVV 617
++D++ L L N F SF+RPN+ ++ ERL + H Y +
Sbjct: 198 TRQDIISELSLENAASFVASFDRPNIRYTIAELGSGSTRERLWQFIEAEHPTDAGIVYCL 257
Query: 618 SLEC-----------GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
S + G KA YH +D RA Q ++ +E II AT+AFGMGI+KPD
Sbjct: 258 SRKSVEETAAWLSSKGRKALAYHAGLDAHIRAGAQTKFLTEEGLIIVATIAFGMGIDKPD 317
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VRFV H +LPKSIE Y+QE GRAGRDG+ ++ + Y D ++++ I Q +
Sbjct: 318 VRFVAHLNLPKSIESYYQETGRAGRDGEPANAWMAYGLQDIVQLRQWIGQ--------SE 369
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
G F + L ++ E CRR L +FGE +S C CDNC
Sbjct: 370 GSEAFKT--------VQRQKLDALIGLAEMP-GCRRQALLAYFGE-MNSEPC-GNCDNC- 417
Query: 787 KIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGK 846
+ +D T A+K + V TGQ+F +++ +V G+ ++ V ++ H+ LS+ G GK
Sbjct: 418 -LSPPHTEDGTVVAQKALSAVYRTGQRFGVTYLADVLIGTADERVLRNGHDRLSVFGIGK 476
Query: 847 HLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
L + + R L + +L D G S VL +A L+ G + ++R
Sbjct: 477 DLPAATWKGLFRQLTAQGYL-----TGDDEGMGSLVLT---ERARPLLRGEERFLMRVTQ 528
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
SKS + +G+ L+ K++ +QP L+ +L+ +R L
Sbjct: 529 -------SKSKLAKKRGASLAPKVAAQ-----NQP-----------LFDALKAVRLKLAT 565
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
A + Y + + TL L+++ P++E L +I G+G +K+++YG ++ I
Sbjct: 566 AA--KLPPYVVAQDRTLIELAEKRPKSESALHDILGLGASKIARYGAAFMQVISQFAAHP 623
Query: 1027 YKTDKNGSSSN 1037
T++ +S N
Sbjct: 624 ALTNRLSASVN 634
>gi|422019090|ref|ZP_16365640.1| ATP-dependent DNA helicase RecQ [Providencia alcalifaciens Dmel2]
gi|414103632|gb|EKT65206.1| ATP-dependent DNA helicase RecQ [Providencia alcalifaciens Dmel2]
Length = 608
Score = 336 bits (862), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 219/655 (33%), Positives = 344/655 (52%), Gaps = 85/655 (12%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG SFRP Q +I + G D VLMPTGGGKSL YQ+PAL+ G+TLV+SPL+SL++D
Sbjct: 21 FGYQSFRPGQDAVIGGILDGRDCLVLMPTGGGKSLCYQVPALVKQGVTLVVSPLISLMKD 80
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L + A L+ + EQ++I+ + K KLLYV PE++ +D ++QLES
Sbjct: 81 QVDQLKLHGVEAACLNSSQTSLEQRQIMEQCTQG--KIKLLYVAPERLL-TDYFIQQLES 137
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
+ +A + +DEAHC+SQWGHDFRP+Y+ LG L++ PN PV+ALTATA + + D+V
Sbjct: 138 WD----IALLAVDEAHCISQWGHDFRPEYRSLGQLRRALPNVPVMALTATADETTRADIV 193
Query: 569 QALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLLKEF 614
+ L L + +I SF+RPN LW + A++ + G+ Y + E
Sbjct: 194 RLLELNDPLIHVSSFDRPNIRYTLVEKYKPLDQLWFFIK--AQKGKSGIVYCNSRSKVEE 251
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G A YH ++ AQR +VQ + KD + I+ ATVAFGMGINK +VRFV H
Sbjct: 252 TAERLQKRGLSVAAYHAGLENAQREWVQDAFQKDNLQIVVATVAFGMGINKSNVRFVAHF 311
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 312 DIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCL-----EEKP---------- 356
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+G + L + ++ E CRRL+ L +FGE + +K C NC +
Sbjct: 357 --AGMQQDIERHKLNAIAAFAEAQT-CRRLVLLNYFGE-----NRQKPCGNCDICLDPPK 408
Query: 794 K-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D A+K + + GQ+F +I+EV RG+ NQ ++ H+ L ++G GK
Sbjct: 409 RYDGLVDAQKALSCIYRVGQRFGIGYIVEVLRGANNQRIRDLGHDKLPVYGIGKEHTNEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+LR L+ + + + S L++ ++ A ++ G + L P +
Sbjct: 469 WVSVLRQLIHLGMITQNITH-------FSALQLTEA-ARPILRGEMPLQLAVPRVL---- 516
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEV-DLNLSAKLYSSLRMLRTLLVKEAGEG 971
++ SRN QN++ N KL++ LR LR + E E
Sbjct: 517 -----------------VTKSRNQ-----QNKIYHGNYDKKLFAKLRKLRKSIADE--EN 552
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
+ + +F +ATL +++ P ELL ING+G+ K+ ++G + I+ ++ +
Sbjct: 553 IPPFVVFNDATLIEMAEHCPTKPVELLLINGVGERKLERFGEAFMTLIQDHLEGY 607
>gi|336248080|ref|YP_004591790.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes KCTC 2190]
gi|444353809|ref|YP_007389953.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes EA1509E]
gi|334734136|gb|AEG96511.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes KCTC 2190]
gi|443904639|emb|CCG32413.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes EA1509E]
Length = 608
Score = 336 bits (862), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 211/654 (32%), Positives = 336/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQESIIATALEGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QIRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P+ P +ALTATA + +
Sbjct: 135 LSHWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPHIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENDIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDLNHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKEFMALIRAHV 603
>gi|417361770|ref|ZP_12135584.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353583121|gb|EHC43574.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
Length = 609
Score = 336 bits (862), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LELGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|168238410|ref|ZP_02663468.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197288782|gb|EDY28157.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 615
Score = 336 bits (862), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LELGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|410617871|ref|ZP_11328835.1| ATP-dependent DNA helicase RecQ [Glaciecola polaris LMG 21857]
gi|410162601|dbj|GAC32973.1| ATP-dependent DNA helicase RecQ [Glaciecola polaris LMG 21857]
Length = 729
Score = 336 bits (862), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 221/650 (34%), Positives = 344/650 (52%), Gaps = 84/650 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG FR +Q+ II ++ + +MPTGGGKSL YQ+P ++ G+T+VISPL+SL
Sbjct: 10 KSVFGFDQFRESQQAIIANVLNQQNTLAIMPTGGGKSLCYQIPGIVFEGLTVVISPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L + +P L+ ++ + Q+ + + K KLL++ PE V ++ +L
Sbjct: 70 MQDQVRQLNELAVPTCMLNSSLSKDDYQDNVNAIEQQ--KVKLLFLAPETVLQNSIL--- 124
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L R +A I IDEAHC+S+WGHDFRP+Y+ L L ++FP+ +ALTATAT V+E
Sbjct: 125 --GLLGRVNVACIAIDEAHCISEWGHDFRPEYRQLNQLLERFPSAVCIALTATATPRVRE 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D+ + L + + SF+RPNL+++ Q ++ G + V
Sbjct: 183 DIKRQLHIAQSSEYIASFDRPNLYIEVLPKDNPYQQAKTFIEQHPEQSGIIYCQSRSGVD 242
Query: 618 SLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G+ A YH ++ +R+ Q+++ +D++ II AT+AFGMGINKPDVR+V+H
Sbjct: 243 DLTAKLQHDGYSALAYHAGLNNVKRSDYQERFIRDDVQIIVATIAFGMGINKPDVRYVLH 302
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LPK+IEGY+Q+ GRAGRDG + C+L + Y D +V+ I Q EQ
Sbjct: 303 YDLPKNIEGYYQQIGRAGRDGLDADCLLLFGYGDTGKVRFFIEQMSNEQEK--------R 354
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS---KIK 789
+AN +L +M++ E + +CRRL L +FGEK C K CDNC+ K K
Sbjct: 355 LANM---------HLNQMLALAETE-ECRRLPLLQYFGEKELPEKCHK-CDNCTNQPKDK 403
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
S D+T +A+K + V TG++F +SHI++V RGS + V +++H LS + G
Sbjct: 404 S----DLTVSAQKFLSCVYRTGERFGASHIIDVLRGSNAEKVLQNQHNMLSTYNIGNEFT 459
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K + + R ++ + L ++ + +G LK+ Q +A ++ G
Sbjct: 460 KKQWMTLSRQMIQKGLL----RQDEQFGG----LKLTQ-QAGEILKGNAPFFALLQQ--- 507
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P S SGK T S+P + A L L+ R L A
Sbjct: 508 ----------PVGQSHSSGK-------TFSKPGD-------AGLMQILKAQRKQLADAA- 542
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y +F + TL ++ +P+ + LL I+G+G+ K+ KYG R L I
Sbjct: 543 -NLPPYAVFADRTLNEMAYFLPQNAQNLLRIHGVGQGKLDKYGERFLALI 591
>gi|291569161|dbj|BAI91433.1| ATP-dependent DNA helicase [Arthrospira platensis NIES-39]
Length = 739
Score = 336 bits (862), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 222/656 (33%), Positives = 346/656 (52%), Gaps = 80/656 (12%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
+ L+ K+ FG SFRP QREII + DV +MPTGGGKSL +QLPAL+ PG+T+V
Sbjct: 12 QSLQQCLKQYFGYDSFRPGQREIIEQVLQKRDVLAIMPTGGGKSLCFQLPALLKPGLTVV 71
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
+SPL++L+QDQ+ L I ATFL+ ++ + ++ RE K KLLYV PE++
Sbjct: 72 VSPLIALMQDQVEALKNNGIEATFLNSTVDLNQARQ--REFAILQGKIKLLYVAPERLL- 128
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
S L L+ ++A ++ +VIDEAHCVS WGHDFRP+Y+ + ++ ++P+ P +ALTAT
Sbjct: 129 SPQFLGFLDRIDAELGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTAT 188
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERLQVGLSYGHFFLL- 611
AT V+ D+++ + L + SF R NL+ ++ + L+ S ++
Sbjct: 189 ATERVRFDIIRQIVLKQPYVHVASFYRSNLYYQVIPKQPKKRFTQLLKAIESMSGSGIIY 248
Query: 612 ----KEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
K V+L+ H A YH + + R ++ +D++ II AT+AFGMGI+K
Sbjct: 249 CSSRKRVEEVALQLQHNNIPALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDK 308
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
PDVRFVIH+ LPKS+E Y+QE GRAGRDGQ + C+L++SY D ++++I Q
Sbjct: 309 PDVRFVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQ-------- 360
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
P + +A + L +++ Y E+ +CR +QL +FGE+F +C CDN
Sbjct: 361 KPDVDEQRIAR---------QQLRQVIDYAES-TECRHRIQLRYFGEEF-PGNC-DGCDN 408
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C + +D T A K + V ++F S+I++V RGS NQ V H+ LS +
Sbjct: 409 CCHERPI--EDWTLEAMKFLSCVARCRERFGMSYIIDVLRGSKNQRVVSRGHDKLSTYNI 466
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ E + R L+ + L + +D Y S+LK+N ++ RQ V
Sbjct: 467 GRDRTVDEWKMLARSLLHQGLLDQ---TNDGY----SILKLNNLSWE--VMKRQREV--- 514
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK-LYSSLRMLRTL 963
K++ R+ PQ + K L LR +R
Sbjct: 515 ------------------------KIAVVRDR--QLPQQTWSMAADVKMLLEHLRQVRKQ 548
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + + Y IF ++TL +++ P+T+E+LL ++G+ K YG + L I
Sbjct: 549 IADQ--NDIAPYKIFSDSTLGLMARERPQTKEDLLRLSGVTAYKAQSYGQQFLNAI 602
>gi|423066192|ref|ZP_17054982.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis C1]
gi|406712234|gb|EKD07423.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis C1]
Length = 739
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 225/656 (34%), Positives = 348/656 (53%), Gaps = 80/656 (12%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
+ L+ K+ FG SFRP Q+EII + DV +MPTGGGKSL +QLPAL+ PG+TLV
Sbjct: 12 QSLQQCLKQYFGYDSFRPGQQEIIEQVLQKRDVLAIMPTGGGKSLCFQLPALLKPGLTLV 71
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
+SPL++L+QDQ+ L I ATFL+ ++ E ++ RE + KLLYV PE++
Sbjct: 72 VSPLIALMQDQVEALKDNGIGATFLNSTVDIHEARQ--RESAILQGQIKLLYVAPERLL- 128
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
S L L+ L A ++ +VIDEAHCVS WGHDFRP+Y+ + ++ ++P+ P +ALTAT
Sbjct: 129 SPQFLDFLDRLEAAFGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTAT 188
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERLQVGLSYGHFFLL- 611
AT V+ D+++ + L + SF R NL+ ++ + L+V S ++
Sbjct: 189 ATERVRFDIIKQIVLKQPYVHVASFYRSNLYYQVIPKQPKKRFPQLLKVIESMSGSGIIY 248
Query: 612 ----KEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
K V+L+ H A YH + + R ++ +D++ II AT+AFGMGI+K
Sbjct: 249 CSSRKRVEEVALQLQHNNIPALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDK 308
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
PDVRFVIH+ LPKS+E Y+QE GRAGRDGQ + C+L++SY D ++++I Q
Sbjct: 309 PDVRFVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQ-------- 360
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
P + +A + L +++ Y E+ +CR +QL +FGE+F +C TCDN
Sbjct: 361 KPDVDEQRIAR---------QQLRQVIDYAES-TECRHRIQLRYFGEEF-PGNC-GTCDN 408
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C + +D T A K + V ++F S+I++V RG+ NQ V H+ LS +
Sbjct: 409 CCHQRPM--EDWTVEAMKFLSCVARCRERFGMSYIIDVLRGAKNQRVLSRGHDKLSTYNI 466
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ E + R L+ + L + +D Y S+LK+N ++ RQ V
Sbjct: 467 GRDRTVDEWKMLARSLLHQGLLDQ---TNDGY----SILKLNNLSWE--VMKRQREV--- 514
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK-LYSSLRMLRTL 963
K++ R+ PQ + K L LR +R
Sbjct: 515 ------------------------KIAVVRDR--QLPQQTWSMAADVKMLLEHLRQVRKQ 548
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
L + + Y IF ++TL +++ P+T+++LL ++G+ KV YG + L I
Sbjct: 549 LADQ--NDIAPYKIFSDSTLGLMARERPQTKQDLLRLSGVTAYKVQHYGQQFLNAI 602
>gi|357484579|ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula]
gi|355513912|gb|AES95535.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula]
Length = 685
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 245/679 (36%), Positives = 334/679 (49%), Gaps = 128/679 (18%)
Query: 372 SWD--FPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
+W+ F W + + +FG S+R NQ+EIINA +SG DV V+M GGGKSL YQLPA
Sbjct: 66 NWNGTFEWDSQADDLRLNIFGISSYRANQKEIINAILSGRDVLVIMAAGGGKSLCYQLPA 125
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFL----SGNMEWTEQQEILRELNSDYCK 485
++ G+ LV+SPL+SLIQDQ+M L IPA L S + E Q R D
Sbjct: 126 VLRNGVALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKDNEKVYIQSFWRRARGDL-- 183
Query: 486 YKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQ 545
KLLYVTPEK+ K I EAHC SQWGHDFRPDY+ LGILK
Sbjct: 184 -KLLYVTPEKITKKQE------------------IYEAHCCSQWGHDFRPDYKNLGILKT 224
Query: 546 KFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEK---------- 594
+FPN P++ALTATAT V+ D+V+ L + C+ F + NRPNL +M EK
Sbjct: 225 QFPNVPMVALTATATQRVQNDLVEMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSKVVVDE 284
Query: 595 VAERLQ-------VGLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQW 644
+AE +Q G+ Y F KE V+ E G A YH +D R V +W
Sbjct: 285 IAEFIQESYPNHESGIVYC--FSRKECEQVAKELRERGISAGHYHADMDVNDREKVHMRW 342
Query: 645 SKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSY 704
S +++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+LY+
Sbjct: 343 SNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRP 402
Query: 705 SDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLL 764
D R M+ NSG +NL +V YC++ CRR
Sbjct: 403 GDVPRQSSMVF-----------------YENSG------LQNLYDIVRYCQSKRQCRRSA 439
Query: 765 QLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFR 824
HF E C CD C+ E DV+ AK +V L+ Q +S R
Sbjct: 440 FFRHFAEPLQ--ECNGMCDICAFSCEVNEVDVSRHAKLMVSLL----QDIQASDQ----R 489
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVK----KSDVYGSVS 880
++ Q V+K + + + G +L + E +++ HL++E L EE + ++ Y +V
Sbjct: 490 STMLQLVEKMKTKQKEI---GSYLKREEMEQLILHLLLERALKEEFQHTAYSTNAYITVG 546
Query: 881 SVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQ 940
+ A ++ G++ V L ++S + T A S +L S
Sbjct: 547 PL-------AKQILQGKKTVKL---------EISTEEKTKA-----SARLKRSLG----- 580
Query: 941 PQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEI 1000
S+ L L LR L G G++ + + + L + P + EEL +
Sbjct: 581 ---------SSGLELKLDELRKELSSNHG-GILPHSVLSTQQISLLCSQKPNSLEELEK- 629
Query: 1001 NGIGKAKVSKYGVRLLETI 1019
IGK K KYG ++L I
Sbjct: 630 -AIGKLKTEKYGNKILAQI 647
>gi|401676992|ref|ZP_10808972.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. SST3]
gi|400215746|gb|EJO46652.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. SST3]
Length = 609
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 215/651 (33%), Positives = 338/651 (51%), Gaps = 80/651 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL+
Sbjct: 19 ETFGYQQFRPGQETIIETVLQGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLM 78
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ LL + A L+ +QQE++ + + +LLY+ PE++ D L L
Sbjct: 79 KDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTG--QIRLLYIAPERLM-LDNFLDHL 135
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + ++D
Sbjct: 136 AHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRQD 191
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEF 614
+V+ LGL + I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 192 IVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVED 251
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 252 TAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 311
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 312 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP---------- 356
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSFI 792
G++ + L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 357 --QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPPK 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 409 QYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
I+R L+ F + + + S L++ ++ L R +V L K
Sbjct: 469 WVSIIRQLIHLGFATQNIAQ-------HSALQLTEAARPVL---RGDVEL---------K 509
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
L+ V K P Q N KL++ LR LR + E E +
Sbjct: 510 LAVPRVVALK---------------PRVMQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L +NG+G K+ ++G + I S +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIRSHV 603
>gi|182415498|ref|YP_001820564.1| ATP-dependent DNA helicase RecQ [Opitutus terrae PB90-1]
gi|177842712|gb|ACB76964.1| ATP-dependent DNA helicase RecQ [Opitutus terrae PB90-1]
Length = 612
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 225/662 (33%), Positives = 357/662 (53%), Gaps = 83/662 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
L+ K+ FG SFRP QREII AT++G DVF L+PTGGGKSL +QLPAL+ PG+T+V+S
Sbjct: 8 LDLTLKRTFGYGSFRPLQREIIAATLAGQDVFALLPTGGGKSLCFQLPALVRPGLTVVVS 67
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L++DQ+ L + + ATFL+ ++ E + LR L+ ++KLLYV PE++
Sbjct: 68 PLIALMKDQVDALQASGVAATFLNSTLDADESRRRLRGLHQG--EFKLLYVAPERL---- 121
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+L ++L A + +A + IDEAHC+S+WGHDFRP+Y+ L L++ P+ P +ALTATAT
Sbjct: 122 MLNGWQDNLRAWQ-IACLAIDEAHCISEWGHDFRPEYRQLAKLRRALPDVPAMALTATAT 180
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNL-------------WMDCEKVAERLQVGLSYGH 607
V+ D+++ L L +F SFNRPNL +D + E + G+ Y
Sbjct: 181 TRVRADIIEHLKLREPAVFVASFNRPNLTYRVIPKDQPLKQIIDFVRKRED-ESGIIYCA 239
Query: 608 FFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPD 666
E SL G A YH + +R Q+++ +D+ I+CAT+AFGMGINKP+
Sbjct: 240 SRAAAERLAESLAGRGFSAKPYHAGLTADERTRHQEEFLRDDARIVCATIAFGMGINKPN 299
Query: 667 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTP 726
VR+VIHH LPK+IEGY+QE GRAGRDG C+L +S D + H + + EQ
Sbjct: 300 VRWVIHHDLPKNIEGYYQETGRAGRDGLPGDCLLLFSAGDIAKQLHFLDEITDEQEQ--- 356
Query: 727 GHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCS 786
+A + L ++V Y E+ CRR L +FGE F +C CDNC
Sbjct: 357 -----QIART---------QLRKIVHYAES-AGCRRAELLAYFGETFGVDNC-GACDNCL 400
Query: 787 KIKSFIEKDVTDTAKKLVELV----KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
+ + D T A+KL+ V + +G +H++EV G+ +++ H+ L+ +
Sbjct: 401 EPRE--TYDGTLVAQKLLSCVYRIQQNSGFSVGLNHLIEVLTGADTDKIRRWGHDRLTTY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G L++S+ + + R L + +L V + + L + R +
Sbjct: 459 GIGAELSRSQWAAVGREL-----------------TRLGLLTVAEGEYATLALTRDGL-- 499
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
+ + ++ +T L+ + + S+ + EV + L++ LR LR
Sbjct: 500 -------TALVQRTPIT------LTKPMDTPKAKRVSRREGEVACD--EILFTRLRGLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
L E V AY +FG+ TL+ +++ P++ + + I G+G+ K +++G R I +
Sbjct: 545 QLADE--RRVPAYIVFGDTTLRAMARYYPQSLDAMEGIPGMGEKKRAEFGARFAAEIAAY 602
Query: 1023 IK 1024
++
Sbjct: 603 LQ 604
>gi|319775328|ref|YP_004137816.1| ATP-dependent DNA helicase [Haemophilus influenzae F3047]
gi|319897768|ref|YP_004135965.1| ATP-dependent DNA helicase [Haemophilus influenzae F3031]
gi|329122676|ref|ZP_08251254.1| ATP-dependent helicase RecQ [Haemophilus aegyptius ATCC 11116]
gi|317433274|emb|CBY81649.1| ATP-dependent DNA helicase [Haemophilus influenzae F3031]
gi|317449919|emb|CBY86131.1| ATP-dependent DNA helicase [Haemophilus influenzae F3047]
gi|327472550|gb|EGF17980.1| ATP-dependent helicase RecQ [Haemophilus aegyptius ATCC 11116]
Length = 619
Score = 336 bits (861), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 222/651 (34%), Positives = 345/651 (52%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + + I IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSK---VCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D+++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILFEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ F + +++ + RG NQ + + +H LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAMLRGMHNQKIIERQHHKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKVILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQGVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|163751804|ref|ZP_02159020.1| ATP-dependent DNA helicase RecQ [Shewanella benthica KT99]
gi|161328289|gb|EDP99450.1| ATP-dependent DNA helicase RecQ [Shewanella benthica KT99]
Length = 610
Score = 336 bits (861), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 223/668 (33%), Positives = 348/668 (52%), Gaps = 86/668 (12%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGI 435
P + L ++ + VFG +FR QRE+I +G D V+MPTGGGKSL YQLPAL PG+
Sbjct: 10 PQSDPLSSSLQSVFGYRTFRKGQREVIEQICAGIDCLVIMPTGGGKSLCYQLPALQMPGL 69
Query: 436 TLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEK 495
T+V+SPL+SL++DQ+ L Q + A +L+ + E+ ILRE++S + KLLYV+PE+
Sbjct: 70 TIVVSPLISLMKDQVDSLQQMGVNAGYLNSSQAGEERARILREMHSG--ELKLLYVSPER 127
Query: 496 VAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLAL 555
+ ++ + R L L+ ++ IDEAHC+SQWGHDFRP+Y LG L+Q FP+ P++AL
Sbjct: 128 LLQASFIER-LHELH----ISLFAIDEAHCISQWGHDFRPEYAALGRLRQYFPHVPIMAL 182
Query: 556 TATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFY 615
TATA + ++D+ Q L + F SF+RPN+ VAE+L F +
Sbjct: 183 TATADQATRQDICQRL-TITPFSFLTSFDRPNIRY---TVAEKLNAANQLRQFVTAQNGS 238
Query: 616 VVSLECG----------------HKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFG 659
+ CG H A YH +R VQ ++ KD+++I+ ATVAFG
Sbjct: 239 SGIIYCGSRRRVDEVAERLRLQGHNADAYHAGRTQEERTDVQDRFLKDQLDIVVATVAFG 298
Query: 660 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA 719
MGINK +VR+V+H+ +PKS+E Y+QE GRAGRDG + ++ + +D RV+H+I Q
Sbjct: 299 MGINKSNVRYVVHYDIPKSVESYYQETGRAGRDGLDAEALMLFDPADIGRVRHLIEQS-- 356
Query: 720 EQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCK 779
PG + + L M ++ E CRR + L +F E +
Sbjct: 357 -----EPGPQQ----------QVELHKLNTMAAFAEAQT-CRRQVLLHYFDES-----AE 395
Query: 780 KTCDNCSKIKSFIEK--DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHE 837
+ C NC ++ + D K L + +L Q F +H++EV RGS V H+
Sbjct: 396 EPCGNCDICLDPPKRYNGIQDAQKVLSSIYRLK-QGFGINHLIEVLRGSKAANVLDRGHD 454
Query: 838 TLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGR 897
LS G GK + I+R ++ F +++ + S +K+N S A ++ G+
Sbjct: 455 KLSTWGIGKDKSHEYWLSIIRQIIHLGFASQDITR-------GSSVKLNPS-ARAVLKGQ 506
Query: 898 QNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSL 957
++L P I T + R+ + P LN KL++ L
Sbjct: 507 VELLLAEPRIILKTTTKR------------------RSGSTRAP-----LNYDRKLFARL 543
Query: 958 RMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLE 1017
++LR L +E V Y +F +ATL ++ P + E+L +NG+G+ K+ ++G L+
Sbjct: 544 KLLRRRLAEEL--DVPPYLVFNDATLAEMAAMTPTSPGEMLAVNGVGERKLGRFGGEFLD 601
Query: 1018 TIESTIKE 1025
I + + +
Sbjct: 602 EIANYLAD 609
>gi|300904077|ref|ZP_07121957.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 84-1]
gi|301303719|ref|ZP_07209840.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 124-1]
gi|415865367|ref|ZP_11538229.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 85-1]
gi|300403957|gb|EFJ87495.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 84-1]
gi|300841019|gb|EFK68779.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 124-1]
gi|315254188|gb|EFU34156.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 85-1]
Length = 611
Score = 336 bits (861), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|16767228|ref|NP_462843.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|168244648|ref|ZP_02669580.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194447354|ref|YP_002047969.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|374979455|ref|ZP_09720791.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|378447302|ref|YP_005234934.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378452860|ref|YP_005240220.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378701824|ref|YP_005183782.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378986647|ref|YP_005249803.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378991246|ref|YP_005254410.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379703206|ref|YP_005244934.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383498567|ref|YP_005399256.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386589323|ref|YP_006085723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|6960244|gb|AAF33434.1| S. typhimurium DNA-dependent ATPase DNA helicase (RECQ) (SP:P40724);
contains similarity to Pfam families PF0057 (HRDC domain,
score=130.4, E=3.3e-35, N=1), PF00270 (DEAD/DEAH box
helicase, score=121.6, E=1.5e-37, N=1) and PF00271
(Helicases conserved C-terminal domain, score=99.8,
E=5.3e-26, N=1) [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16422522|gb|AAL22802.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194405658|gb|ACF65877.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205336505|gb|EDZ23269.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|261249081|emb|CBG26942.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996239|gb|ACY91124.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160473|emb|CBW20003.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915076|dbj|BAJ39050.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225476|gb|EFX50533.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323132305|gb|ADX19735.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332990793|gb|AEF09776.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|380465388|gb|AFD60791.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|383796367|gb|AFH43449.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
Length = 615
Score = 336 bits (861), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 216/661 (32%), Positives = 348/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N LLA +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP-VLLA---VDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A R VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|296089753|emb|CBI39572.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 336 bits (861), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 194/449 (43%), Positives = 253/449 (56%), Gaps = 60/449 (13%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
E N +FGN +FRP Q + A+++ D FVLMPTGGGKSL YQLPA + PG+T+V+
Sbjct: 160 FELANVVIFGNRTFRPLQHQACKASVTKRDCFVLMPTGGGKSLCYQLPATLQPGVTVVVC 219
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELN------------------- 480
PL+SLIQDQI+ L L IPATFLS ++ +L+EL
Sbjct: 220 PLLSLIQDQIITLNLNFGIPATFLSSQQTASQAAAVLKELRLLFPGICFQNCYLLLSFEV 279
Query: 481 SDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL 540
D KLLYVTPE++A + L+SL+ + LA V+DEAHCVSQWGHDFRPDY+ L
Sbjct: 280 KDKPSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEAHCVSQWGHDFRPDYREL 339
Query: 541 GILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERL 599
G LKQ FP+ PV+ALTATAT V++D++ +L + + ++ SF+R NL + K E L
Sbjct: 340 GCLKQNFPDVPVMALTATATQPVRKDILNSLRIPHALVLETSFDRSNLKYEVIGKTKEPL 399
Query: 600 -QVGLSYGHFF--LLKEFYVVSL------------ECGHKAAFYHGSIDPAQRAFVQKQW 644
Q+G F L Y +S +C K +YH + QR VQK+W
Sbjct: 400 KQLGQLLKDRFKNLCGIVYCLSKSECAEVSKFLNGKCKIKTVYYHAGLSARQRIDVQKKW 459
Query: 645 SKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSY 704
+++IICAT+AFGMGINKP+VRFVIH+++ KSIE Y+QE GRAGRD + C+ Y
Sbjct: 460 HTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDLPAVCMALYQK 519
Query: 705 SDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLL---RMVSYCENDVDCR 761
DF RV M+ G +S ET E + +M YCE +CR
Sbjct: 520 KDFSRVVCMLRNGHGCKS------------------ETFKEAMTQARKMQQYCELKTECR 561
Query: 762 RLLQLVHFGEKFDSAHCK---KTCDNCSK 787
R L HFGE D CK CDNC K
Sbjct: 562 RQTLLEHFGESLDRKACKNGCNPCDNCLK 590
>gi|170769878|ref|ZP_02904331.1| ATP-dependent DNA helicase RecQ [Escherichia albertii TW07627]
gi|170121316|gb|EDS90247.1| ATP-dependent DNA helicase RecQ [Escherichia albertii TW07627]
Length = 611
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 207/652 (31%), Positives = 342/652 (52%), Gaps = 80/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 20 QETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISL 79
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A L+ +Q +++ + + +LLY+ PE++ D L
Sbjct: 80 MKDQVDQLQANGVAAACLNSTQTREQQLDVMTGCRTG--QIRLLYIAPERLM-LDNFLEH 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N A + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + ++
Sbjct: 137 LAHWNP----ALLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQ 192
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 193 DIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 252
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 253 DTAARLQSRGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 312
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 313 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP--------- 358
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
G++ + L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 359 ---QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPP 409
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D + A+ + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 410 KQYDASTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIREFGHDKLKVYGMGRDKSHE 469
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ + + + + S L++ ++ A ++ G ++ L P +
Sbjct: 470 HWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQLAVPRIVAL- 520
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
P Q N KL++ LR LR + E E
Sbjct: 521 -------------------------KPKVMQKSFGGNYDRKLFAKLRKLRKAIADE--EN 553
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ Y +F +ATL +++++P T E+L +NG+G K+ ++G + I + +
Sbjct: 554 IPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMTLIRAHV 605
>gi|429089133|ref|ZP_19151865.1| ATP-dependent DNA helicase RecQ [Cronobacter universalis NCTC 9529]
gi|426508936|emb|CCK16977.1| ATP-dependent DNA helicase RecQ [Cronobacter universalis NCTC 9529]
Length = 609
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 343/651 (52%), Gaps = 78/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+A + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTIVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ +L + + +LLY+ PE++ + +
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSRDEQQAVLAGCRTG--EVRLLYIAPERLMMDNFI--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++L +L A + +DEAHC+SQWGHDFRP+Y LG L+ +FP P +ALTATA + +
Sbjct: 133 -DTLGYWDL-AMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFIALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE----EKAP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A C CD C +
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPR 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ ++
Sbjct: 409 RYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++R L+ + + + + S L++ ++ A + G ++L P + + K
Sbjct: 469 WVSVIRQLIHLGVVTQNIAQ-------HSALQLTEA-ARPFLRGEAPLMLAVPR-VAALK 519
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 520 -------------------------PRVAQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L ING+G K+ ++G + I +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIREHV 603
>gi|422021069|ref|ZP_16367583.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
gi|414099974|gb|EKT61607.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
Length = 608
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 221/657 (33%), Positives = 344/657 (52%), Gaps = 89/657 (13%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG SFRP Q +I A + D VLMPTGGGKSL YQ+PAL+ GITLV+SPL+SL++D
Sbjct: 21 FGYQSFRPGQEAVIRAILDNRDCLVLMPTGGGKSLCYQVPALVKDGITLVVSPLISLMKD 80
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYC---KYKLLYVTPEKVAKSDVLLRQ 505
Q+ L + A L+ + EQ+E++ D C K KLLYV PE++ +D L
Sbjct: 81 QVDQLQLHGVNAACLNSSQTALEQREVM-----DACSQGKIKLLYVAPERLL-TDYFLSH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N +A +DEAHC+SQWGHDFRP+Y+G+G L+Q FP+ PV+ALTATA + +
Sbjct: 135 LSNWN----VALFAVDEAHCISQWGHDFRPEYRGMGQLRQHFPDVPVMALTATADETTRA 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+++ L L + +I SF+RPN LW + A++ + G+ Y +
Sbjct: 191 DIIRRLDLQDPLIQISSFDRPNIRYTLVEKYKPLDQLWFFIK--AQKGKAGIVYCNSRNK 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G YH +D QR +VQ + KD I I+ ATVAFGMGINK +VRFV
Sbjct: 249 VEETAERLKKRGLTVEAYHAGLDNQQREWVQDAFLKDNIQIVVATVAFGMGINKSNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 309 AHFDIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G + L + ++ E CRRL+ L +FGE + C CD C +
Sbjct: 357 -----AGMHQDIERHKLNAIAAFAEAQT-CRRLVLLNYFGENRQTP-C-GNCDIC--LDP 406
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
+ D A+K + + GQ+F +I+EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 407 PKQYDGLVDAQKALSCIYRVGQRFGIGYIVEVLRGANNQRIRDLGHDKLPVYGIGKEHSN 466
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
+LR L+ +++ + S L++ ++ A ++ G ++ L P +
Sbjct: 467 EHWVSVLRQLIHLGMIVQNITH-------FSALQLTEA-ARPVLRGETSLQLAVPRVL-- 516
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEV-DLNLSAKLYSSLRMLRTLLVKEAG 969
++ SRN QN++ N KL++ LR LR + E
Sbjct: 517 -------------------VTKSRNQ-----QNKIYHGNYDKKLFAKLRKLRKSIADE-- 550
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
+ + + +F +ATL +++ P + ELL ING+G+ K+ ++G + I+ I+ +
Sbjct: 551 DNIPPFVVFNDATLIEMAEHCPTSSSELLLINGVGEKKLERFGEAFMALIQDHIEGY 607
>gi|417792738|ref|ZP_12440060.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii E899]
gi|429117792|ref|ZP_19178710.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 701]
gi|449309964|ref|YP_007442320.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii SP291]
gi|333953169|gb|EGL71149.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii E899]
gi|426320921|emb|CCK04823.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii 701]
gi|449099997|gb|AGE88031.1| ATP-dependent DNA helicase RecQ [Cronobacter sakazakii SP291]
Length = 609
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 210/651 (32%), Positives = 343/651 (52%), Gaps = 78/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+A + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTIVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ + + +LLY+ PE++ + +
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREEQQAVMAGCRTG--QVRLLYIAPERLMMDNFI--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++L +L A + +DEAHC+SQWGHDFRP+Y LG L+ +FP P +ALTATA + +
Sbjct: 133 -DTLGYWDL-AMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE----EKAP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A C CD C +
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPR 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ ++
Sbjct: 409 RYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++R L+ + + + + S L++ ++ A + G ++L P + + K
Sbjct: 469 WVSVIRQLIHLGVVTQNIAQ-------HSALQLTEA-ARPFLRGEAPLMLAVPR-VAALK 519
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 520 -------------------------PRVAQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L ING+G K+ ++G + I +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIREHV 603
>gi|88603641|ref|YP_503819.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
gi|88189103|gb|ABD42100.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
Length = 606
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 214/646 (33%), Positives = 334/646 (51%), Gaps = 77/646 (11%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG ++RP Q+EII + G DV ++ TGGGKSL YQ+PALI G+ +VISPL++L++D
Sbjct: 16 FGYRTYRPGQKEIITHVLEGRDVLAVIATGGGKSLCYQIPALIRDGVGIVISPLIALMKD 75
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLES 508
Q+ L ++ IPA FL+ + +++ I + KLLY++PE++ + + E
Sbjct: 76 QVDCLAESGIPAAFLNSTQDVKDKRSIEGSILDG--SLKLLYISPERLVQPSFI----EF 129
Query: 509 LNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVV 568
L + + + IDEAHC+SQWGH+FRP+Y+ L I+++ F + P++ALTATAT SV+ D++
Sbjct: 130 LKSTRI-SLFAIDEAHCISQWGHEFRPEYRKLSIIRRTFADVPIIALTATATPSVRSDII 188
Query: 569 QALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVVSL- 619
L L N +F SFNR NL K + Q + + G + + V L
Sbjct: 189 SELSLHNPAVFVGSFNRENLIYRIVKKEDGEQQLVQFLKSHQNESGIVYCFSKRQVTDLA 248
Query: 620 ----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 675
+ G A YH + + R Q ++ +DE+ II ATVAFGMGINKPDVRFV+H L
Sbjct: 249 RVLQKNGFSALPYHADLPKSVRHETQDRFLRDEVRIIVATVAFGMGINKPDVRFVVHFDL 308
Query: 676 PKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVAN 735
PK++E Y+QE GRAGRDG + C+L YS DF +++++I Q +AE
Sbjct: 309 PKNLEHYYQETGRAGRDGDPAECLLLYSRGDFRKIEYLIEQ-MAE--------------- 352
Query: 736 SGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKD 795
G + + L MV YCE+ CRR + L +FGE +D C CD+C + + D
Sbjct: 353 -GTERQVSLRKLHEMVGYCESRA-CRRAVLLTYFGESWDKPSC-GNCDSCHSGRKTM--D 407
Query: 796 VTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASR 855
DT + + + S++ ++ G+ ++ V H+TL+ G+G +
Sbjct: 408 GRDTLAVIAACIDELKDDYGVSYLADIISGTADEKVIARGHDTLACFGSGHPHRRGVWVY 467
Query: 856 ILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSK 915
+R L+ +L YGS V++ N + + + G + P I +
Sbjct: 468 WIRELIACGYLSR-------YGSRYPVVRKN-PRTKDALAG------KIPVRIGEPEFQS 513
Query: 916 SDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAY 975
+ G G+ SP+ N+ LY LR +R + E + +
Sbjct: 514 A----LPGEPYDGQRSPAENN----------------LYEILRDVRKTIADEL--DMPPF 551
Query: 976 HIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
IF N TL+ ++K PR E+L I G+G+ ++ +YG LE I +
Sbjct: 552 RIFPNRTLREMAKARPRCPEDLRTIYGVGERRLMQYGQLFLEAINA 597
>gi|342905065|ref|ZP_08726857.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21621]
gi|341951895|gb|EGT78444.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21621]
Length = 619
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 225/661 (34%), Positives = 349/661 (52%), Gaps = 77/661 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFEGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + +A IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSKVSFIA---IDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADYATRQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILTHLNLENPHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGISAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
LP+SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P T
Sbjct: 314 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPET------- 361
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
S R +E ++ L + CRRL+ L +FGE H + C+NC
Sbjct: 362 ---SQRQIE---QHKLEAIGEFAESQTCRRLVLLNYFGE-----HRQTPCNNCDICLDPP 410
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+K D A+K++ + GQ + + +++ V RG NQ + + +H+ LS++G GK +K
Sbjct: 411 KKYDGLVDAQKVMSAIYRVGQCYGAHYVIAVLRGMHNQKIIERQHDKLSVYGIGKDKSKE 470
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F+ + V ++ L++ +S A ++ G + + L P +
Sbjct: 471 HWQSVIRQLIHLGFVQQ------VISELNPTLQLTES-AKAILKGEEPLELAMPRISAIS 523
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K++ + PQ + N L++ LR LR + + E
Sbjct: 524 KIAHN------------------------PQRQSVANYDKDLFARLRFLRKQIADK--EN 557
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDK 1031
+ Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+ KT
Sbjct: 558 IPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMVLIQEHKAILAKTQN 617
Query: 1032 N 1032
N
Sbjct: 618 N 618
>gi|157115597|ref|XP_001652627.1| DNA helicase recq1 [Aedes aegypti]
gi|108876847|gb|EAT41072.1| AAEL007256-PA [Aedes aegypti]
Length = 750
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 198/540 (36%), Positives = 292/540 (54%), Gaps = 57/540 (10%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W S +F W+K++ K+VF FR Q INA ++ +V +L PTGGGKSL YQLPA
Sbjct: 74 WESEEFGWSKEVRRVLKEVFHMADFRAQQLATINALLAKQNVLLLAPTGGGKSLCYQLPA 133
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYCKYKL 488
++ GITLV+SPL+SL++DQ+ L + I A +L G E + + L + D K+
Sbjct: 134 VVSKGITLVVSPLISLMEDQVWALKKRGIRAEYLCGTSEKELVSAVHKYLRDGDDGNLKI 193
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
L+VTPE++ +S L+ + LA+I IDE HC SQWGHDFR DY+ LGI K FP
Sbjct: 194 LFVTPERINRSARFKTALQKCYNIKKLAQIAIDEVHCCSQWGHDFRTDYKELGIFKTLFP 253
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM-------DCEKVAERL-- 599
+ P+L +TATAT V DV + L L C+ FNRPNL+ D E++ + L
Sbjct: 254 DVPILGVTATATTKVISDVQKMLQLSECLTLNAPFNRPNLYYHVLEKPNDKEELYDLLAD 313
Query: 600 --------QVGLSYGHFFLLKEFYVVSLECGH---KAAFYHG-SIDPAQRAFVQKQWSKD 647
G+ Y F +KE +S E K YHG ++DP QR+ ++W +
Sbjct: 314 LLKRRYHGMSGIIYT--FTVKETAEISTELLQREVKVLPYHGQNMDPKQRSRTHQKWIDN 371
Query: 648 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDF 707
EI + AT AFGMGI+KPDVRFVIHH++ K++E ++QE GRAGRDG+R+ C+L Y +D
Sbjct: 372 EIQAVVATTAFGMGIDKPDVRFVIHHTMSKTMENFYQESGRAGRDGKRADCILLYRLADM 431
Query: 708 IRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLV 767
R+ M + + G +NL MV YC N DCRR+L
Sbjct: 432 FRISTM------------------SFSEYG-----GLDNLYSMVKYCINGKDCRRVLISR 468
Query: 768 HFGEKFDSAHCKKTCDNC---SKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFR 824
HF E +D HC K CD C +++ E+D+T + L+ +++ + L++
Sbjct: 469 HFAEVWDDTHCDKLCDRCFFKDRVQ-LPEQDITGHYQTLLAIIRRAQTLQTKLTALKLVD 527
Query: 825 GSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLK 884
++ K+R ET L + +I+ HL++ +L E+ + + Y + S ++K
Sbjct: 528 AWYHKGSPKNRLET-----PPPLLDRFIGEQIVAHLLVNGYLKEDFQITP-YSTFSYIVK 581
>gi|432566205|ref|ZP_19802760.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE51]
gi|431089461|gb|ELD95275.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE51]
Length = 611
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFVIH +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVIHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|432545657|ref|ZP_19782479.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE236]
gi|432551136|ref|ZP_19787884.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE237]
gi|432624192|ref|ZP_19860204.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE76]
gi|432817612|ref|ZP_20051362.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE115]
gi|431070550|gb|ELD78853.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE236]
gi|431075989|gb|ELD83505.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE237]
gi|431155723|gb|ELE56469.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE76]
gi|431360028|gb|ELG46649.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE115]
Length = 611
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NGIG K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGIGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|331685543|ref|ZP_08386127.1| ATP-dependent DNA helicase RecQ [Escherichia coli H299]
gi|331077244|gb|EGI48458.1| ATP-dependent DNA helicase RecQ [Escherichia coli H299]
Length = 611
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|354721299|ref|ZP_09035514.1| ATP-dependent DNA helicase RecQ [Enterobacter mori LMG 25706]
Length = 609
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 334/649 (51%), Gaps = 80/649 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL+
Sbjct: 19 ETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLM 78
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ LL + A L+ +QQE++ + + +LLY+ PE++ D L L
Sbjct: 79 KDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTG--QIRLLYIAPERLM-LDNFLDHL 135
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + + D
Sbjct: 136 AHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRLD 191
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEF 614
+V+ LGL + I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 192 IVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVED 251
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 252 TAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 311
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 312 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP---------- 356
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSFI 792
G++ + L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 357 --QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPPK 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 409 QYDGLMDARKALSTIGRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKEQSHEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
I+R L+ F + + + S L++ ++ A ++ G + L P I
Sbjct: 469 WVSIIRQLIHLGFATQNIAQ-------HSALQLTEA-ARPVLRGEVELKLAVPRVIAL-- 518
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 519 ------------------------KPRVMQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
Y +F +ATL +++++P + E+L +NG+G K+ ++G + I S
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIRS 601
>gi|432682606|ref|ZP_19917956.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE143]
gi|431216878|gb|ELF14470.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE143]
Length = 611
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKAEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|312379036|gb|EFR25440.1| hypothetical protein AND_09184 [Anopheles darlingi]
Length = 532
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 182/413 (44%), Positives = 237/413 (57%), Gaps = 46/413 (11%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
W F W+ K+ +VF FRP Q INA ++GHDV +L PTGGGKSL +QLPA
Sbjct: 65 WDKESFDWSAKVRKTLSEVFHLQDFRPQQLRTINALLAGHDVLLLAPTGGGKSLCFQLPA 124
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILREL-NSDYCKYKL 488
LI PG+T+VISPLVSL++DQ+ L + I A L E +E EILR + N KL
Sbjct: 125 LITPGLTVVISPLVSLMEDQVWSLQKLKIAAKLLCSTTERSEANEILRSMANPSQSTVKL 184
Query: 489 LYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP 548
LYVTPE+++KS + L+ + L R IDE HC SQWGHDFRPDY+ LG+LK+ FP
Sbjct: 185 LYVTPERMSKSKRFMSALQKCFSNGQLDRFAIDEVHCCSQWGHDFRPDYKYLGVLKELFP 244
Query: 549 NTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWM----------DCEKVAER 598
PVL +TATATA+V +DV + L + N I+F SFNRPNL+ D +V E
Sbjct: 245 KIPVLGVTATATAAVIKDVQKMLRIPNSILFVASFNRPNLYYHVLEKPLSKKDQYEVLES 304
Query: 599 L-------QVGLSYGHFFLLKEFYVVSLEC---GHKAAFYHGSIDPAQRAFVQKQWSKDE 648
L Q G+ Y F +K+ +S E G K A YH ++ A R + + W +
Sbjct: 305 LLEKRFHKQSGIVYT--FSIKDAEEISEELRERGLKVAPYHATLPAADRTKIHQLWIANR 362
Query: 649 INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFI 708
+ + ATVAFGMGI+KPDVRFVIHH+L KS+E ++QE GRAGRDGQ + C+L Y +SD
Sbjct: 363 LQAVIATVAFGMGIDKPDVRFVIHHTLSKSMENFYQETGRAGRDGQPADCILLYHFSDMF 422
Query: 709 RVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCR 761
R+ M+ T +N MV YC N +CR
Sbjct: 423 RISTMMFSEY-----------------------TGLQNAYAMVDYCINRSECR 452
>gi|429107085|ref|ZP_19168954.1| ATP-dependent DNA helicase RecQ [Cronobacter malonaticus 681]
gi|426293808|emb|CCJ95067.1| ATP-dependent DNA helicase RecQ [Cronobacter malonaticus 681]
Length = 609
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 210/651 (32%), Positives = 343/651 (52%), Gaps = 78/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+A + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTIVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ + + +LLY+ PE++ + +
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRTG--QVRLLYIAPERLMMDNFI--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++L +L A + +DEAHC+SQWGHDFRP+Y LG L+ +FP P +ALTATA + +
Sbjct: 133 -DTLGYWDL-AMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE----EKAP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A C CD C +
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPR 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ ++
Sbjct: 409 RYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++R L+ + + + + S L++ ++ A + G ++L P + + K
Sbjct: 469 WVSVIRQLIHLGVVTQNIAQ-------HSALQLTEA-ARPFLRGEAPLMLAVPR-VAALK 519
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 520 -------------------------PRVAQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L ING+G K+ ++G + I +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIREHV 603
>gi|74316914|ref|YP_314654.1| ATP-dependent DNA helicase RecQ [Thiobacillus denitrificans ATCC
25259]
gi|74056409|gb|AAZ96849.1| ATP-dependent DNA helicase RecQ [Thiobacillus denitrificans ATCC
25259]
Length = 598
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 231/646 (35%), Positives = 339/646 (52%), Gaps = 74/646 (11%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+VFG +FR Q I++ ++G D VLMPTGGGKSL YQ+PAL+ G +V+SPL++L+
Sbjct: 11 RVFGYPAFRGEQAAIVDTVVAGDDALVLMPTGGGKSLCYQIPALLREGCAVVVSPLIALM 70
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
QDQ+ L + I A FL+ +++ + R+ S + KLLYV PE++ L +
Sbjct: 71 QDQVAALQELGIAAAFLNSSLDGATAARVERDFVSG--QLKLLYVAPERL-----LTPRF 123
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
+SL A +A IDEAHCVSQWGHDFRP+Y GL L ++FP P +ALTATA A+ + +
Sbjct: 124 QSLLAEARIALFAIDEAHCVSQWGHDFRPEYLGLSALHERFPEVPRIALTATADAATRAE 183
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLSYGHFFLLKEF 614
++Q L L +F SF+RPN+ + EK R Q+ G+ Y E
Sbjct: 184 ILQRLDLGAARVFVASFDRPNIRYRIAEKTEPRRQLLDFLAEHTGEAGIVYCSTRKKVEE 243
Query: 615 YVVSL-ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+L + G A YHG +D R Q+++ ++E ++ AT+AFGMGI+KPDVRFV H
Sbjct: 244 TADALKQAGLTALPYHGGMDNDTRRRHQEKFLREEGVVMVATLAFGMGIDKPDVRFVAHL 303
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LP+S+EGY+QE GRAGRDG+ + + + D + + I +G A + GH + +
Sbjct: 304 DLPRSVEGYYQETGRAGRDGEPAEAWMAWGLQDVVTQRRFIDEGEAGDAHKRIGHAKLDA 363
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
+V CE CRR+ L +FGE S C CD C +
Sbjct: 364 ----------------LVGLCEA-ASCRRVALLSYFGEA--SQPC-GNCDVCLNPPTLW- 402
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D T+ A+KL+ V TGQ+F + H+++V G + + + H LS+ G G
Sbjct: 403 -DGTEAAQKLLSTVYRTGQRFGAGHVIDVLLGKTTEKIDRFGHSQLSVFGIGASQTDKVW 461
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
+LR LV+ L EV S YG+ LK+ Q+ A ++ G + V+LR A + K
Sbjct: 462 RAVLRQLVVRGLL--EVDHS-AYGA----LKLTQA-AKPVLKGEETVMLRAIEARPARK- 512
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
KS + P+ G+ + P L+ SLR R E +GV
Sbjct: 513 -KSRLAPSSGAGVHDDEDP--------------------LFLSLRAWRRETANE--KGVP 549
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
AY I +ATL+ ++ R P T EL EI+G+G K+ YG +L +
Sbjct: 550 AYVILHDATLREIAARRPATLAELGEISGLGTKKLEAYGEDVLAVV 595
>gi|392546619|ref|ZP_10293756.1| ATP-dependent DNA helicase [Pseudoalteromonas rubra ATCC 29570]
Length = 604
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 224/656 (34%), Positives = 336/656 (51%), Gaps = 89/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+VFG FR Q ++I A + G D VL+PTGGGKSL YQ+PALI PG +V+SPL+SL
Sbjct: 17 KEVFGYSDFRDGQLDVIQACLDGRDSLVLLPTGGGKSLCYQVPALILPGTCVVVSPLISL 76
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L I A F++ +++ +QQ I + L+ + KLLYV PEK+ +S+ + R
Sbjct: 77 MQDQVAQLQALGISAEFINNSLDRAQQQAIYQRLHQG--EIKLLYVAPEKILQSEFIER- 133
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L L L IDEAHCVS WGHDFRP Y L LK +F + P++ALTATA + +
Sbjct: 134 LSHLQ----LGLFAIDEAHCVSHWGHDFRPHYCRLHELKHRFASVPMMALTATADLATRS 189
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFL-----LK 612
D+V LGL I SF+RPN+ E+ + L + Y G + +
Sbjct: 190 DIVTQLGLQTPFIHTGSFDRPNIRYTIEEKFKPLSQLMRYLRTQKGQSGIVYCSSRKRVD 249
Query: 613 EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+ +E G AA YH + QR FVQ +++D+I I+ ATVAFGMGINK +VR+V+H
Sbjct: 250 DIAEKLVEAGFNAAAYHAGMSNEQRQFVQNAFARDDIQIVVATVAFGMGINKSNVRYVLH 309
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ +PKSIE Y+QE GRAGRDG + ++Y+ +D RVK E H R
Sbjct: 310 YDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVKRFFEDIEDE-------HRR-- 360
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
RV E + M S+ CRR + L +F E + ++ C NC
Sbjct: 361 -----RVEE---QRFSSMASFASAQT-CRRQILLNYFSE-----YQREPCGNCDICLNPP 406
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D T A++ + + Q+F +I++V RG+ ++ ++H TLS +G GK
Sbjct: 407 KRF---DGTLVAQQALSCIYRAEQRFGLGYIVDVLRGANTARIRDNQHHTLSTYGIGKEH 463
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ ILR L+ + ++ + Q A L G ++ VLR A+
Sbjct: 464 SNEYWLSILRQLIHHGLVAQD---------------ITQGAALRLTEGARS-VLRGEYAL 507
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEV-DLNLSAKLYSSLRMLRTLLVKE 967
+L+ R + Q+++ N KL++ LR LR L +
Sbjct: 508 --------------------QLAQPRLEAKHVYQDKLAQFNYDKKLFAKLRSLRKELADQ 547
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
+ V Y +F + TL +++ P + E L+++G+G K+SKYG ++ I + +
Sbjct: 548 --DDVPPYVVFSDKTLAEMAQLTPTNDSEFLKVSGVGFTKLSKYGAPFMQLIRNYL 601
>gi|82546173|ref|YP_410120.1| ATP-dependent DNA helicase RecQ [Shigella boydii Sb227]
gi|416295404|ref|ZP_11651155.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CDC 796-83]
gi|81247584|gb|ABB68292.1| ATP-dependent DNA helicase [Shigella boydii Sb227]
gi|320186210|gb|EFW60949.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CDC 796-83]
Length = 611
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMCKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|294506188|ref|YP_003570246.1| ATP-dependent DNA helicase RecQ [Salinibacter ruber M8]
gi|294342516|emb|CBH23294.1| ATP-dependent DNA helicase RecQ [Salinibacter ruber M8]
Length = 621
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 210/656 (32%), Positives = 336/656 (51%), Gaps = 87/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG +FRP Q ++ + G D VLMPTGGGKSL YQ+PA++ G +V+SPL+SL
Sbjct: 27 QSVFGYETFRPYQEPVVQRLVDGGDALVLMPTGGGKSLCYQIPAMVRDGPGIVVSPLISL 86
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A L+ ++ E++ + L + + L YV PE+ + +
Sbjct: 87 MQDQVDALQQVGVRAAVLNSSLGRKEREAVEHRLTAG--ELDLCYVAPERATRD-----R 139
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++L +R + + IDEAHC+SQWGHDFRP+Y L L+ F P +A+TATA ++
Sbjct: 140 FKTLLSRARPSLLAIDEAHCISQWGHDFRPEYLALADLRGDFAQIPCIAVTATADPPTQQ 199
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE-------FYVVS 618
V+ LG+ + F F+RPN+ E +R + L H F+ +E Y +S
Sbjct: 200 VVLDRLGMTDEDRFVAGFDRPNIRYVVEPKGDRPRQQL---HEFIEREHPGQNGIVYCLS 256
Query: 619 -----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
+ GH A YH + +R+ Q ++ +++ I+ ATVAFGMGI+KPDV
Sbjct: 257 RNGVETTADWLTDHGHTAVPYHAGLSDHKRSEHQDRFLREDGLIVVATVAFGMGIDKPDV 316
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV H +PK++E Y+QE GRAGRDG+ ++ + Y D +R++ +I
Sbjct: 317 RFVAHLDVPKTLEAYYQETGRAGRDGRPATAWMAYRRGDVVRMRQLID------------ 364
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ A + T L ++ YCE DCRR + L +FGE C CDNC +
Sbjct: 365 ----DSAENDEHRWTQRHKLNALLGYCEAP-DCRRKVLLNYFGEDMGGDTCGN-CDNCLR 418
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
E T A+K + + TGQ+F S H+ +V G + +++H H+T+S +G G
Sbjct: 419 PPDTWEG--TTAAQKALSCIARTGQRFGSGHVTDVLLGKDTEKIQRHDHDTVSTYGIGAD 476
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+K+E +LR LV + + +V YG+++ ++ GR+ V R +A
Sbjct: 477 RSKAEWRSVLRQLVAKGMVEVDVMG---YGALTLT-----EDCRPVLKGRETVAFRDGAA 528
Query: 908 I----NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
N+TK + D PA G P+ E L+ +LR RT
Sbjct: 529 ASASPNTTKTAADDPLPADG-----------------PERE--------LFEALRERRTQ 563
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + + V Y IF + TL+ + + P+++ + ++G+G K+ +YG + L+TI
Sbjct: 564 IATD--QDVPPYVIFNDKTLRAMVEHRPQSKSDFRALHGVGDVKLERYGRQFLDTI 617
>gi|381188984|ref|ZP_09896542.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379649120|gb|EIA07697.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 704
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 218/655 (33%), Positives = 337/655 (51%), Gaps = 83/655 (12%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
++KL K+ FG FR NQ ++INA +SG D +MPTGGGKS+ +QLPAL+ PGIT+
Sbjct: 4 SQKLHETLKENFGFEKFRINQEQVINAILSGQDTLAIMPTGGGKSICFQLPALLFPGITI 63
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
VISPL++L++DQ+ L I A +++ + EQQ ++ L ++ K KL+YV PE
Sbjct: 64 VISPLIALMKDQVDSLKANGIQACYINSSQTDAEQQSHIQNLINN--KVKLVYVAPES-- 119
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
L LE++ ++ L+ I IDEAHC+S WGHDFRP Y LG LK++FP+TP+LALTA
Sbjct: 120 -----LSYLENVFSQITLSLIAIDEAHCISSWGHDFRPAYTNLGYLKKRFPSTPILALTA 174
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFF 609
TA + ++D+ + L L F SF+R NL ++ +R++ + + G +
Sbjct: 175 TADKATRKDISKQLNLKEPKSFISSFDRKNLSLEVRPALDRVKQIVDFISAKPRESGIVY 234
Query: 610 LLKEFYVVSL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
L L + G A YH +D R+ Q + D+ ++CAT+AFGMGI+K
Sbjct: 235 CLSRKTTEELAEKLQKAGINAKAYHAGLDSTVRSKTQDDFINDDCQVVCATIAFGMGIDK 294
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
+VR+VIH++LPK+IEGY+QE GRAGRDG S +L+ SY D I+++ SQG+
Sbjct: 295 SNVRWVIHYNLPKNIEGYYQEIGRAGRDGLPSETILFESYGDVIQLQKFASQGLNA---- 350
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
E L RM Y + + CRR + L +FGE + +C CD
Sbjct: 351 ----------------EVQLAKLERMKQYADA-LSCRRKILLSYFGE-LVTENC-GNCDI 391
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C +F D T A+K + + + I++ RGS N Y+ + ++ L +
Sbjct: 392 CKNPPAFF--DGTIIAQKALSAIMRLKELEPLPVIVDFLRGSKNAYIFEKEYQNLKTYAV 449
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G ++ + ++ + L+ + + + Q+K + R+ VL
Sbjct: 450 GADISWYDWNQYIIQLINQGY--------------CEIAFHQQNKIRLTTLARE--VLFE 493
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
+ T + K+ V L K + + L+ LR LR +
Sbjct: 494 GDKVQLTTVQKNTVEKTDTKELKSK------------------SATNSLFEKLRKLRYEI 535
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
KE E V AY IF +A L+ + + P ++ EL+ I+G+GKAK+ KYG + I
Sbjct: 536 SKE--ESVPAYVIFSDAALRQMETKRPMSDVELIAIDGVGKAKLEKYGDAFINAI 588
>gi|421359294|ref|ZP_15809589.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421361216|ref|ZP_15811481.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421369214|ref|ZP_15819397.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370097|ref|ZP_15820268.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375163|ref|ZP_15825277.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421381841|ref|ZP_15831895.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421383689|ref|ZP_15833723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421388254|ref|ZP_15838246.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421395342|ref|ZP_15845279.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421399721|ref|ZP_15849615.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421401736|ref|ZP_15851603.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421408846|ref|ZP_15858644.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421410862|ref|ZP_15860634.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421417923|ref|ZP_15867631.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421420145|ref|ZP_15869824.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421424283|ref|ZP_15873927.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421428799|ref|ZP_15878402.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421436041|ref|ZP_15885575.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421438465|ref|ZP_15887961.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421442493|ref|ZP_15891943.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421447151|ref|ZP_15896554.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|423142444|ref|ZP_17130082.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|436590140|ref|ZP_20511973.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436773695|ref|ZP_20520937.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436801171|ref|ZP_20524764.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436806449|ref|ZP_20526657.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436813890|ref|ZP_20532071.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436846021|ref|ZP_20539079.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436847880|ref|ZP_20539851.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436859968|ref|ZP_20547789.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436867019|ref|ZP_20552419.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436868646|ref|ZP_20553305.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436876222|ref|ZP_20557703.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436890157|ref|ZP_20565743.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436898410|ref|ZP_20570408.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436901964|ref|ZP_20572847.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436908529|ref|ZP_20575758.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436917083|ref|ZP_20580671.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436922688|ref|ZP_20584694.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436937839|ref|ZP_20592942.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436940075|ref|ZP_20594112.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436948403|ref|ZP_20598638.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436958486|ref|ZP_20603161.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436967336|ref|ZP_20607279.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436980997|ref|ZP_20613386.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|437000083|ref|ZP_20620555.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437008856|ref|ZP_20623591.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437014194|ref|ZP_20625395.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437026436|ref|ZP_20629799.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437037336|ref|ZP_20634192.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437053403|ref|ZP_20642484.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437061353|ref|ZP_20646907.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437063066|ref|ZP_20647795.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437071962|ref|ZP_20652217.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437083523|ref|ZP_20659197.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437092191|ref|ZP_20663717.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437098966|ref|ZP_20665653.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437119083|ref|ZP_20670704.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437131539|ref|ZP_20677442.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437139344|ref|ZP_20681754.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437142342|ref|ZP_20683688.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437149724|ref|ZP_20688293.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437158406|ref|ZP_20693315.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437165051|ref|ZP_20697379.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437173698|ref|ZP_20701890.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437184963|ref|ZP_20708690.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437234431|ref|ZP_20713723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437257290|ref|ZP_20715882.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437265075|ref|ZP_20720272.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437273609|ref|ZP_20724778.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437284293|ref|ZP_20729497.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437318852|ref|ZP_20738133.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437320960|ref|ZP_20738439.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437342283|ref|ZP_20745299.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437395546|ref|ZP_20751328.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437419348|ref|ZP_20754380.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437439041|ref|ZP_20757093.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437463867|ref|ZP_20763421.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437472396|ref|ZP_20765495.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437487635|ref|ZP_20769971.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437512325|ref|ZP_20777246.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437529101|ref|ZP_20780305.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437557237|ref|ZP_20785110.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437569652|ref|ZP_20787960.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437582271|ref|ZP_20792322.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437599758|ref|ZP_20797007.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437620810|ref|ZP_20804300.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437630225|ref|ZP_20806226.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437656115|ref|ZP_20810623.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437674556|ref|ZP_20816555.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437689555|ref|ZP_20820139.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437703289|ref|ZP_20824415.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437727903|ref|ZP_20830344.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437778162|ref|ZP_20836273.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437809292|ref|ZP_20840588.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437899536|ref|ZP_20849750.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|438058078|ref|ZP_20856562.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|438088905|ref|ZP_20860120.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438102051|ref|ZP_20864758.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438107411|ref|ZP_20866718.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|440762769|ref|ZP_20941820.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440766569|ref|ZP_20945558.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440771658|ref|ZP_20950571.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|445130940|ref|ZP_21381550.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|445141894|ref|ZP_21385681.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445150436|ref|ZP_21389723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445174893|ref|ZP_21397165.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445204757|ref|ZP_21401335.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445230566|ref|ZP_21405428.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445303745|ref|ZP_21411560.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445328683|ref|ZP_21413170.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445345133|ref|ZP_21418007.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445358858|ref|ZP_21422890.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|379050373|gb|EHY68266.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|395982718|gb|EJH91917.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395985586|gb|EJH94755.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395993696|gb|EJI02788.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395999768|gb|EJI08784.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396005742|gb|EJI14716.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396007658|gb|EJI16603.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396012742|gb|EJI21637.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396020771|gb|EJI29610.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396021181|gb|EJI30008.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396026583|gb|EJI35349.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396026668|gb|EJI35433.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396034171|gb|EJI42873.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396039462|gb|EJI48088.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396045947|gb|EJI54537.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396047582|gb|EJI56154.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396055399|gb|EJI63885.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396060547|gb|EJI68990.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396060632|gb|EJI69074.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396072908|gb|EJI81215.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|396073411|gb|EJI81713.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396075234|gb|EJI83509.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|434958340|gb|ELL51900.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434961813|gb|ELL55066.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|434969388|gb|ELL62095.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434974710|gb|ELL67042.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434978162|gb|ELL70220.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434980142|gb|ELL72071.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434987107|gb|ELL78757.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434991131|gb|ELL82651.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434993686|gb|ELL85085.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435003891|gb|ELL94890.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435006652|gb|ELL97528.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435010977|gb|ELM01723.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435013508|gb|ELM04143.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435020275|gb|ELM10688.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435030324|gb|ELM20355.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435031946|gb|ELM21892.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435034925|gb|ELM24781.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435043992|gb|ELM33691.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435046917|gb|ELM36526.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435055947|gb|ELM45352.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435056032|gb|ELM45436.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435059378|gb|ELM48656.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435061695|gb|ELM50916.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435067089|gb|ELM56159.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435067431|gb|ELM56472.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435085682|gb|ELM74230.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435086732|gb|ELM75262.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435088035|gb|ELM76493.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435089334|gb|ELM77771.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435089411|gb|ELM77847.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435103456|gb|ELM91546.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435108066|gb|ELM96043.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435110863|gb|ELM98770.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435112004|gb|ELM99887.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435124000|gb|ELN11483.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435126022|gb|ELN13434.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435130597|gb|ELN17826.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435131711|gb|ELN18918.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435142463|gb|ELN29364.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435147536|gb|ELN34299.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435151498|gb|ELN38139.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435154464|gb|ELN41044.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435158385|gb|ELN44787.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435160339|gb|ELN46619.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435167446|gb|ELN53370.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435177494|gb|ELN62817.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435177804|gb|ELN63075.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435178514|gb|ELN63722.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435185584|gb|ELN70443.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435192097|gb|ELN76651.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435193062|gb|ELN77563.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435196876|gb|ELN81195.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435198704|gb|ELN82860.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435201681|gb|ELN85570.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435212790|gb|ELN95748.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435217896|gb|ELO00304.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435226055|gb|ELO07650.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435230671|gb|ELO11962.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435232525|gb|ELO13620.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435241056|gb|ELO21444.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435245892|gb|ELO25920.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435250142|gb|ELO29884.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435256685|gb|ELO35980.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435263151|gb|ELO42218.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435264044|gb|ELO43066.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435272436|gb|ELO50837.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435278119|gb|ELO55991.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435282011|gb|ELO59650.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435284000|gb|ELO61512.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435291040|gb|ELO67927.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435293720|gb|ELO70384.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435299379|gb|ELO75529.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435303382|gb|ELO79270.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435314209|gb|ELO87664.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435317076|gb|ELO90139.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435321829|gb|ELO94188.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435323956|gb|ELO95934.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435333513|gb|ELP04315.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|436420777|gb|ELP18634.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436421917|gb|ELP19757.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436422492|gb|ELP20328.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|444850160|gb|ELX75264.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444851274|gb|ELX76366.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444856864|gb|ELX81883.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444858827|gb|ELX83800.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444861272|gb|ELX86157.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444864271|gb|ELX89075.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444878165|gb|ELY02289.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|444879443|gb|ELY03543.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444879737|gb|ELY03830.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444885738|gb|ELY09515.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
Length = 609
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|404371546|ref|ZP_10976850.1| ATP-dependent DNA helicase RecQ [Clostridium sp. 7_2_43FAA]
gi|404301376|gb|EEH97528.2| ATP-dependent DNA helicase RecQ [Clostridium sp. 7_2_43FAA]
Length = 810
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 216/655 (32%), Positives = 344/655 (52%), Gaps = 90/655 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+K +G SFR Q IIN+ +SG+DV +MPTGGGKS+ YQ+PAL+ G+T+VISPL+SL
Sbjct: 10 EKYYGYKSFRRGQENIINSILSGNDVLAIMPTGGGKSICYQIPALLLDGVTIVISPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ + + I +T+++ ++ E +EI+ + + KYK++YV PE++ + ++
Sbjct: 70 MKDQVDAIKEMGIESTYINSSLTSKEFEEIITNVKEN--KYKIVYVAPERLESYEFIMAI 127
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL-ALTATATASVK 564
E +++I IDEAHCVSQWGHDFR Y+ + + P++ A TATAT VK
Sbjct: 128 TECR-----ISQIAIDEAHCVSQWGHDFRSSYRRIKNFIEMLNIRPIVTAFTATATEEVK 182
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFL-----L 611
D++ LGL + +F F+R NL+++ EK ++ L Y G + +
Sbjct: 183 GDIINLLGLRDPSLFVTGFDRENLFINIEKGNDKKSYILKYIEENRDSSGIIYAATRKEV 242
Query: 612 KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
Y + G+KA YH ++ R Q+ + KD+INI+ AT AFGMGI+KP++RFVI
Sbjct: 243 DYIYELLTSNGYKAGRYHAGLNDELRKENQEDFIKDKINIMVATNAFGMGIDKPNIRFVI 302
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+++PK+IEGY+QE GRAGRDG++S C+L +S SD K++I V+ ++ + F
Sbjct: 303 HYNMPKNIEGYYQEIGRAGRDGEKSECILLFSPSDIHTQKYLIE--VSTENIERKNNQYF 360
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ ++ +N DC R L +FGE + C+NCS S
Sbjct: 361 KLKQMVDLIYSN---------------DCYRKYILNYFGE-----DVHENCNNCSNCLSE 400
Query: 792 IE-KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
E D T A+K++ + + F + +++V RGS N V + LS +G K +
Sbjct: 401 GELVDKTIDAQKVLSCIYRMKKSFGVAMVVDVLRGSKNSKVINAKFNELSTYGIMKDYSS 460
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
E + L+ ++ D V+K+N +K+ +I G +NV +
Sbjct: 461 DELKVFINTLISHGYI-------DYVEGTYPVIKLN-NKSIKVIKGEENVQFK------- 505
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
K+ + ND + L+ LR LR + E E
Sbjct: 506 ----------------EVKIKSTSNDNNT-------------LFEILRELRFNIANE--E 534
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
GV Y IFG+ TL+ +S + P EEL+ I+G+G+ K++KYG + TI+ + E
Sbjct: 535 GVPPYIIFGDNTLREMSTKYPLNLEELMNISGVGEVKLNKYGEIFINTIKDYVDE 589
Score = 42.0 bits (97), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 935 NDTPSQPQNEVDLNLSA--KLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPR 992
N+ + EV LN+ + +L S L+++R + E + I TL+ +S R P
Sbjct: 596 NNEYKKKNEEVYLNVESNKELLSRLKVIRREFANK--ENSLPQAILSLNTLKEISGRFPL 653
Query: 993 TEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
EEL +I+GIG K++KYG ++E + + E
Sbjct: 654 NLEELKDISGIGPKKITKYGDEIIEEVRRFVVE 686
>gi|417684666|ref|ZP_12334002.1| ATP-dependent DNA helicase RecQ [Shigella boydii 3594-74]
gi|420327851|ref|ZP_14829589.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CCH060]
gi|420355277|ref|ZP_14856349.1| ATP-dependent DNA helicase RecQ [Shigella boydii 4444-74]
gi|421684822|ref|ZP_16124603.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1485-80]
gi|332088521|gb|EGI93637.1| ATP-dependent DNA helicase RecQ [Shigella boydii 3594-74]
gi|391245516|gb|EIQ04783.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CCH060]
gi|391273146|gb|EIQ31974.1| ATP-dependent DNA helicase RecQ [Shigella boydii 4444-74]
gi|404335343|gb|EJZ61813.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1485-80]
Length = 609
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMCKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|197247389|ref|YP_002148883.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|198243255|ref|YP_002217887.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205354483|ref|YP_002228284.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207859158|ref|YP_002245809.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238912961|ref|ZP_04656798.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|375121408|ref|ZP_09766575.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|375125367|ref|ZP_09770531.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|197211092|gb|ACH48489.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197937771|gb|ACH75104.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205274264|emb|CAR39283.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206710961|emb|CAR35329.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326625675|gb|EGE32020.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|326629617|gb|EGE35960.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 615
Score = 335 bits (860), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|445053267|ref|ZP_21368273.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0083]
gi|444659629|gb|ELW32037.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0083]
Length = 603
Score = 335 bits (860), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 3 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 62
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 63 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 120
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 121 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 175
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 176 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 235
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 236 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 295
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 296 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 350
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 351 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 392
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 393 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 452
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 453 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 504
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 505 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 538
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 539 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 596
Query: 1023 I 1023
+
Sbjct: 597 V 597
>gi|312971887|ref|ZP_07786061.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1827-70]
gi|310334264|gb|EFQ00469.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1827-70]
Length = 609
Score = 335 bits (860), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQDTFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKPGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|120436098|ref|YP_861784.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
gi|117578248|emb|CAL66717.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
Length = 702
Score = 335 bits (860), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 216/647 (33%), Positives = 341/647 (52%), Gaps = 86/647 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG +FRP Q++IIN+ G D V+MPTGGGKS+ YQLPA++ P ITLVISPL++L
Sbjct: 11 KEYFGYENFRPLQKKIINSVFEGQDNLVIMPTGGGKSICYQLPAILLPEITLVISPLIAL 70
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L +PA +L+ + E ++Q I +++++ + KLLYV PE + D LL
Sbjct: 71 MKDQVDGLNANGVPAAYLNSSQEEADKQAIFQKIDNK--EIKLLYVAPESLQFVDRLL-- 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++ + ++ I IDEAHC+S WGHDFRP Y LG LK +FP+TP+LALTATA + +
Sbjct: 127 ---VDGK--VSLIAIDEAHCISSWGHDFRPAYTQLGYLKNRFPSTPILALTATADKATRN 181
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D+ + L + SF+R NL ++ + +R + + G + L
Sbjct: 182 DICKQLNVPKAKKHIASFDRKNLSLEVKPGIKRFEQISQFLRNRQSESGIIYCLSRKTTE 241
Query: 618 SLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G KA YH ID R+ +Q + DE IICAT+AFGMGI+K ++R+VIH
Sbjct: 242 ELASKLKRKGFKAEAYHAGIDHLNRSKIQDDFINDEKQIICATIAFGMGIDKSNIRWVIH 301
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+++PK++EGY+QE GRAGRDG S +L++SY+D I+++ S E
Sbjct: 302 YNMPKNLEGYYQEIGRAGRDGLASDTLLFHSYADVIQLQKFASNAKNE------------ 349
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
E L RM Y E + CRR + L +FGE + C CD C F
Sbjct: 350 --------EVQLAKLDRMKQYSEA-LSCRRKILLGYFGE-YLQEDC-GNCDICRNPPEFF 398
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
E V K L + +L + S +++V RGS N+ ++++ ++ LS + GK ++
Sbjct: 399 EGTVI-AQKALSCIFRLKASE-PISAVIDVLRGSQNELIRRNNYQELSTYAIGKDISWHH 456
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ L L+ ++ ++ ++ L++ + +A ++ ++ V L
Sbjct: 457 WQQYLIQLINLGYI-------EIAFDRNNHLQLTE-QAKKVLFEKEKVYL---------- 498
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
+DV K + + K + N L+ LR LR + KE E +
Sbjct: 499 ---ADVKEEKQNNQAAKSGVAENS----------------LFERLRQLRLKIAKE--EDI 537
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
AY IF +A L+ + K+ P ++ E L I+G+G+ K+ YG R ++ I
Sbjct: 538 PAYLIFNDAALKDMEKQRPMSDSEFLLIDGVGRKKMEDYGYRFIKEI 584
>gi|170680861|ref|YP_001746140.1| ATP-dependent DNA helicase RecQ [Escherichia coli SMS-3-5]
gi|170518579|gb|ACB16757.1| ATP-dependent DNA helicase RecQ [Escherichia coli SMS-3-5]
Length = 611
Score = 335 bits (859), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAVCLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|328789066|ref|XP_396807.4| PREDICTED: ATP-dependent DNA helicase Q1-like [Apis mellifera]
Length = 596
Score = 335 bits (859), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 278/531 (52%), Gaps = 46/531 (8%)
Query: 370 WSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPA 429
WS DF W+K L+ K VF R Q +NA MS DV ++MPTGGGKSL YQLPA
Sbjct: 71 WSKEDFTWSKNLKKTLKDVFKIEKLRELQLPTMNAIMSNEDVILIMPTGGGKSLCYQLPA 130
Query: 430 LICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLL 489
+I GIT+V+SPL+SL++DQI L + N+ A LS + I+ L KL+
Sbjct: 131 VISKGITIVVSPLLSLMEDQIHGLQKHNVKAGMLSAKCNKENVKIIMNALIDKKSDLKLI 190
Query: 490 YVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 549
YVTPE +AKS+ + +L+ + L R IDE HC SQWGHDFRPDY+ LGILK FP
Sbjct: 191 YVTPEYMAKSNRFMNKLQKAFEMKRLDRFAIDEVHCCSQWGHDFRPDYKFLGILKSMFPG 250
Query: 550 TPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMD----------CEKVAERL 599
P+L LTATA A + DV + L + C++ R +FNRPNL+ + C + E L
Sbjct: 251 VPILGLTATAPAKIIVDVQKMLDIQGCLVLRATFNRPNLFYEVRRKPTDKDTCLAMIENL 310
Query: 600 -------QVGLSYGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINI 651
+ G+ Y E L G K YH ++ R+ V +W +
Sbjct: 311 LKNRFKDKSGIIYTTTIKDAEQLTTDLRAVGLKVGCYHAMLEADYRSEVYSKWISGKYQA 370
Query: 652 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVK 711
+ AT+AFG+GI+KPDVR+VIHHS+ KS+E ++QE GRAGRDG++S C++ Y D ++
Sbjct: 371 VVATIAFGLGIDKPDVRYVIHHSISKSMESFYQESGRAGRDGKKSMCIVLYKLQDIFKLS 430
Query: 712 HMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGE 771
M+ Q + +NL +M++YC + CRR L HF E
Sbjct: 431 TMVFQD-----------------------KVGLQNLYKMLAYCLDQTSCRRSLIATHFEE 467
Query: 772 KFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYV 831
+ + C + CD+C K+K + ++ ++L +++ Q + +L++ +
Sbjct: 468 SWTRSDCAEMCDHCRKLKDNKQINIAPYCRQLYQIMTKAVQNETRLTVLKLIDAWYGKGA 527
Query: 832 KKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSV 882
R ++ + + I+ HL++ +L E+ S Y ++S +
Sbjct: 528 SILRVSSVPI----PKFTRESGEAIIGHLLVNGYLQEDFHFS-AYSTISYI 573
>gi|422355837|ref|ZP_16436541.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 117-3]
gi|324016198|gb|EGB85417.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 117-3]
Length = 611
Score = 335 bits (859), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|293407448|ref|ZP_06651368.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1412]
gi|298383188|ref|ZP_06992782.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1302]
gi|300900624|ref|ZP_07118784.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 198-1]
gi|419937477|ref|ZP_14454373.1| ATP-dependent DNA helicase RecQ [Escherichia coli 576-1]
gi|422335405|ref|ZP_16416404.1| ATP-dependent DNA helicase recQ [Escherichia coli 4_1_47FAA]
gi|432355858|ref|ZP_19599118.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE2]
gi|432404223|ref|ZP_19646965.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE26]
gi|432428490|ref|ZP_19670969.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE181]
gi|432463191|ref|ZP_19705321.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE204]
gi|432478186|ref|ZP_19720170.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE208]
gi|432491658|ref|ZP_19733516.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE213]
gi|432520039|ref|ZP_19757217.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE228]
gi|432540207|ref|ZP_19777097.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE235]
gi|432633771|ref|ZP_19869687.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE80]
gi|432643423|ref|ZP_19879243.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE83]
gi|432668418|ref|ZP_19903986.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE116]
gi|432772598|ref|ZP_20006908.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE54]
gi|432841683|ref|ZP_20075137.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE140]
gi|432889621|ref|ZP_20102893.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE158]
gi|432915492|ref|ZP_20120747.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE190]
gi|433021080|ref|ZP_20209155.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE105]
gi|433055454|ref|ZP_20242605.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE122]
gi|433070190|ref|ZP_20256950.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE128]
gi|433160980|ref|ZP_20345793.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE177]
gi|433180699|ref|ZP_20365069.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE82]
gi|433205578|ref|ZP_20389319.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE95]
gi|291425559|gb|EFE98597.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1412]
gi|298276424|gb|EFI17943.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1302]
gi|300355875|gb|EFJ71745.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 198-1]
gi|373243555|gb|EHP63057.1| ATP-dependent DNA helicase recQ [Escherichia coli 4_1_47FAA]
gi|388397659|gb|EIL58631.1| ATP-dependent DNA helicase RecQ [Escherichia coli 576-1]
gi|430872071|gb|ELB95690.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE2]
gi|430922543|gb|ELC43295.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE26]
gi|430950316|gb|ELC69702.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE181]
gi|430985141|gb|ELD01748.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE204]
gi|431001695|gb|ELD17271.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE208]
gi|431017014|gb|ELD30531.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE213]
gi|431047458|gb|ELD57458.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE228]
gi|431066698|gb|ELD75322.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE235]
gi|431166942|gb|ELE67245.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE80]
gi|431177006|gb|ELE76946.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE83]
gi|431197038|gb|ELE95905.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE116]
gi|431323251|gb|ELG10799.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE54]
gi|431384955|gb|ELG68945.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE140]
gi|431413215|gb|ELG96009.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE158]
gi|431435094|gb|ELH16707.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE190]
gi|431526412|gb|ELI03166.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE105]
gi|431565194|gb|ELI38332.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE122]
gi|431578296|gb|ELI50904.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE128]
gi|431673078|gb|ELJ39309.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE177]
gi|431697564|gb|ELJ62670.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE82]
gi|431715540|gb|ELJ79688.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE95]
Length = 611
Score = 335 bits (859), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 343/661 (51%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + Q+ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIA--------------------------QHSAL 494
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
+ A S+S + A +++ K P Q N KL++ LR LR
Sbjct: 495 QLTEAARPVLRSESSLQLAVPRIVALK--------PKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|29653815|ref|NP_819507.1| ATP-dependent DNA helicase [Coxiella burnetii RSA 493]
gi|29541078|gb|AAO90021.1| ATP-dependent DNA helicase [Coxiella burnetii RSA 493]
Length = 601
Score = 335 bits (859), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 220/648 (33%), Positives = 345/648 (53%), Gaps = 75/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG +FRP Q +IIN+ ++G D FVLMPTGGGKSL YQ+PAL+ G+ +V+SPL+SL
Sbjct: 10 RQTFGYENFRPLQEKIINSVIAGEDNFVLMPTGGGKSLCYQIPALVREGVGIVVSPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L A + + E ++ L L+++ + LLY+ PE++ L R
Sbjct: 70 MQDQVQALNANGAAAALYNSTLTEAEARKNLARLHNN--ELDLLYIAPERLMTESFLSR- 126
Query: 506 LESLNAREL-LARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
RE+ LA + IDEAHCVSQWGHDFRP+Y LG L++ FP P +ALTATA +
Sbjct: 127 -----LREVKLALVAIDEAHCVSQWGHDFRPEYLRLGELREYFPKVPFIALTATADKQTR 181
Query: 565 EDVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFFLLKEFYV 616
+D++Q L L + SFNRPN+ ++ +K +L L +G + L V
Sbjct: 182 QDILQRLRLTKANVHIASFNRPNIRYTLLEKQKSYNQLVNFLKDRKADFGIVYCLSRNRV 241
Query: 617 VSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ G+ A YH + AQR Q+ + +D++NII AT+AFGMGI+KP+VRFV+
Sbjct: 242 EEVAAKLQADGYSALPYHAGLPAAQRGKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFVV 301
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ LPK IEGY+QE GRAGRDG S +L Y D +K I G E H +
Sbjct: 302 HYDLPKHIEGYYQETGRAGRDGLPSEALLLYGLRDIAVIKSFIENGNNEIRKRIELH-KL 360
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
N M ++ E CRR + L +F E + C CD C + S
Sbjct: 361 NC----------------MSAFAEART-CRRRVLLNYFNESL-TEDC-GNCDIC--LNSP 399
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ T A+K + V +++ +++++V RG + +K+ H+ LS +G GK L+++
Sbjct: 400 ETYNGTIEAQKALSCVYRVRERYGVNYVIDVLRGKDDPRIKRAGHDRLSTYGIGKELSQN 459
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
E + R L+ +L +++ S+L++ AH+++ G++ ++L P
Sbjct: 460 EWYSVFRQLIHLGYLEQDLAN-------YSILRLT-PLAHSILRGKETLILAKPR----- 506
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K ++L K ++ ++ + P + A L+ LR LR + +E+
Sbjct: 507 ---------EKYNVLKKKYKAAKANSSASPYD-------AALFEKLRELRKAIARES--R 548
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V + IF +A+L ++ R+P ++ E L ING+G+ K+ YG L I
Sbjct: 549 VAPFIIFSDASLVEMASRLPVSDSEFLAINGVGQKKLENYGKLFLHLI 596
>gi|392981231|ref|YP_006479819.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392327164|gb|AFM62117.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 609
Score = 335 bits (859), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 215/649 (33%), Positives = 337/649 (51%), Gaps = 80/649 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL+
Sbjct: 19 ETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLM 78
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ LL + A L+ +QQE++ + + +LLY+ PE++ D L L
Sbjct: 79 KDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTG--QIRLLYIAPERLM-LDNFLDHL 135
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + + D
Sbjct: 136 AHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRLD 191
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEF 614
+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 192 IVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVED 251
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 252 TAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 311
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 312 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP---------- 356
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSFI 792
G++ + L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 357 --QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPPK 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 409 QYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
I+R L+ F + + + S L++ ++ L R +V L K
Sbjct: 469 WVSIIRQLIHLGFATQNIAQ-------HSALQLTEAARPVL---RGDVEL---------K 509
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
L+ V K P Q N KL++ LR LR + E E +
Sbjct: 510 LAVPRVVALK---------------PRVMQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
Y +F +ATL +++++P + E+L +NG+G K+ ++G + I S
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKAFMALIRS 601
>gi|82778997|ref|YP_405346.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae Sd197]
gi|81243145|gb|ABB63855.1| ATP-dependent DNA helicase [Shigella dysenteriae Sd197]
Length = 611
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQIREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE +++C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QESCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLNVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|419765474|ref|ZP_14291711.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741738|gb|EJK88959.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 608
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 210/654 (32%), Positives = 336/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QVRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ N +++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNHRIREMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKPFMALIRAHV 603
>gi|300917877|ref|ZP_07134511.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 115-1]
gi|432531614|ref|ZP_19768636.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE234]
gi|300414922|gb|EFJ98232.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 115-1]
gi|431066937|gb|ELD75555.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE234]
Length = 611
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRTKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|218707455|ref|YP_002414974.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMN026]
gi|417588964|ref|ZP_12239725.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_C165-02]
gi|218434552|emb|CAR15481.1| ATP-dependent DNA helicase [Escherichia coli UMN026]
gi|345331100|gb|EGW63561.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_C165-02]
Length = 609
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 343/661 (51%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + Q+ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIA--------------------------QHSAL 492
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
+ A S+S + A +++ K P Q N KL++ LR LR
Sbjct: 493 QLTEAARPVLRSESSLQLAVPRIVALK--------PKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|416062304|ref|ZP_11581397.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|416069431|ref|ZP_11583273.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|347997266|gb|EGY38280.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348000045|gb|EGY40845.1| ATP-dependent DNA helicase RecQ [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 629
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 342/648 (52%), Gaps = 82/648 (12%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQ 447
VFG SFR Q+EIINA ++G D V+M TG GKSL YQ+PAL G TLV+SPL+SL++
Sbjct: 38 VFGYQSFRKGQQEIINAVLNGQDCLVIMATGTGKSLCYQIPALCFDGTTLVVSPLISLMK 97
Query: 448 DQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLE 507
DQ+ L + A +L+ + EQQ++ S + KLLY++PEKV S Q
Sbjct: 98 DQVDQLRANGVAADYLNSTQTFEEQQQVQNRAISG--QLKLLYLSPEKVMTSSFF--QFI 153
Query: 508 SLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDV 567
SL +A IDEAHC+SQWGHDFRP+Y LG LK FPN P++ALTATA + ++D+
Sbjct: 154 SLCQVSFIA---IDEAHCISQWGHDFRPEYTQLGGLKGSFPNVPIMALTATADQTTQQDI 210
Query: 568 VQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKEFY 615
+Q L L + SF+RPN+ + EK +A++ + G+ Y + E
Sbjct: 211 LQNLRLNRPHFYVGSFDRPNIRYTLVEKFKPMEQLCRFVLAQKGKSGIVYCNSRNKVERI 270
Query: 616 VVSLEC--GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+L C G +AA YH ++ R VQ+ + +D I ++ AT+AFGMGINK +VRFV H
Sbjct: 271 AETL-CNKGVRAAAYHAGMENGLREKVQRDFQRDNIQVVVATIAFGMGINKSNVRFVAHF 329
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LP+SIE Y+QE GRAGRD + VL+Y +D++ + M+ + P TP
Sbjct: 330 DLPRSIESYYQETGRAGRDDLPAEAVLFYDPADYVWLNKMLM-----EKPETP------- 377
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
R +E ++ L+ + CRRL+ L +F E H + C NC +
Sbjct: 378 ---QRQIE---QHKLQAIGEFAESQTCRRLVLLNYFSE-----HRQTPCQNCDICLDPPK 426
Query: 794 K--DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
K + D A+K++ + TGQ + + +++ V RG NQ +++ RHE LS++G GK
Sbjct: 427 KYNGLLD-AQKIMSAIYRTGQCYGAHYVIAVLRGMNNQKIREQRHEQLSVYGIGKEHGTE 485
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+LR LV + + + G + L++ ++ A ++ G + + L
Sbjct: 486 YWQSVLRQLVHLGLVRQ------IIGEYGNTLQLTEN-AKPILRGEEPLEL--------- 529
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
TP S+++ ++P + L++ LR LR + + E
Sbjct: 530 ------ATPRLSSIVTTAMTPKSTVG----------SYDKDLFARLRFLRKQIADK--EN 571
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ Y +F +ATLQ +++ P + E+L+ING+G K+ ++G L I
Sbjct: 572 IPPYIVFNDATLQEMAQYQPVSNIEMLQINGVGAIKLERFGQAFLALI 619
>gi|429083282|ref|ZP_19146326.1| ATP-dependent DNA helicase RecQ [Cronobacter condimenti 1330]
gi|426547898|emb|CCJ72367.1| ATP-dependent DNA helicase RecQ [Cronobacter condimenti 1330]
Length = 609
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 341/651 (52%), Gaps = 78/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+A + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ + + +LLY+ PE++ D +
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRTG--QVRLLYIAPERLMM-DNFIDN 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N L + +DEAHC+SQWGHDFRP+Y LG L+ +FP P +ALTATA + +
Sbjct: 135 LTYWN----LTMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE----EKAP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A C CD C +
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPR 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D A+K + + Q+F ++++V RG+ NQ +++ H+ L ++G G+ ++
Sbjct: 409 RYDGLVDAQKALSAIARVEQRFGMGYVVDVLRGANNQRIRELGHDKLKVYGIGRDQSQEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++R L+ +M+ + + S L++ ++ A + G ++L P + + K
Sbjct: 469 WVSVIRQLIHLGVVMQNIAQ-------HSALQLTEA-ARPFLRGETPLMLAVPR-VAALK 519
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 520 -------------------------PRVAQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L ING+G K+ ++G + I +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIREHV 603
>gi|200386748|ref|ZP_03213360.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205358016|ref|ZP_02574990.2| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|419729880|ref|ZP_14256835.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419733429|ref|ZP_14260327.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739272|ref|ZP_14266022.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419744302|ref|ZP_14270957.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419747546|ref|ZP_14274055.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|421568554|ref|ZP_16014270.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421573152|ref|ZP_16018793.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421577825|ref|ZP_16023409.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421585417|ref|ZP_16030915.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|422028195|ref|ZP_16374511.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422033246|ref|ZP_16379328.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427556417|ref|ZP_18929834.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427573922|ref|ZP_18934425.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427595457|ref|ZP_18939339.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427620224|ref|ZP_18944221.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427643553|ref|ZP_18949109.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427658213|ref|ZP_18953833.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427663471|ref|ZP_18958735.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427680435|ref|ZP_18963628.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427801523|ref|ZP_18969078.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|19859341|sp|P40724.3|RECQ_SALTY RecName: Full=ATP-dependent DNA helicase RecQ
gi|199603846|gb|EDZ02391.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205328138|gb|EDZ14902.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|381295573|gb|EIC36683.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381299619|gb|EIC40690.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381300148|gb|EIC41212.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381309157|gb|EIC49998.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381316946|gb|EIC57683.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|402526073|gb|EJW33352.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402529061|gb|EJW36309.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402529843|gb|EJW37071.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402530062|gb|EJW37285.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414012332|gb|EKS96254.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414013685|gb|EKS97561.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414013736|gb|EKS97610.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414027502|gb|EKT10730.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414028451|gb|EKT11639.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414030693|gb|EKT13785.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414041738|gb|EKT24296.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414042549|gb|EKT25086.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414046946|gb|EKT29251.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414055658|gb|EKT37543.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414061964|gb|EKT43335.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 609
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 213/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A R VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|419926481|ref|ZP_14444247.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-15]
gi|388382669|gb|EIL44516.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-15]
Length = 611
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSTLQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|282860206|ref|ZP_06269280.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|424899672|ref|ZP_18323214.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
gi|282587027|gb|EFB92258.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|388591872|gb|EIM32111.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
Length = 727
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 223/665 (33%), Positives = 349/665 (52%), Gaps = 98/665 (14%)
Query: 384 NNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLV 443
N K FG +F+ Q II ++G+D FVLMPTGGGKSL YQLP+LI G +V+SPL+
Sbjct: 10 NLKHYFGFDNFKGEQEAIIRHLLAGYDAFVLMPTGGGKSLCYQLPSLIMEGTAVVVSPLI 69
Query: 444 SLIQDQ---IMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
+L+++Q I + + + A +L+ +++ E ++ ++ K KLLYV PE + K D
Sbjct: 70 ALMKNQVDVINGISEGDGVAHYLNSSLKKAEVDKVRTDIREG--KTKLLYVAPESLNKED 127
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
+E L ++ + IDEAHC+S+WGHDFRP+Y+ + + P++ALTATAT
Sbjct: 128 ----NIEFLKTVKV-SFYAIDEAHCISEWGHDFRPEYRKIRNAIEVIGRAPIIALTATAT 182
Query: 561 ASVKEDVVQALGLVNCIIFRQSFNRPNLWM---------DCEKVAERL---QVGLSYGHF 608
A V+ D+V++LG+ C FR SFNRPNL+ D K R G S G
Sbjct: 183 AKVRTDIVRSLGIEGCAEFRSSFNRPNLYYEVRPKKSEDDTNKQIIRFIKQHTGKS-GII 241
Query: 609 FLL-----KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
+ L +E V L KAA YH +D R+ Q Q+ ++I++I AT+AFGMGI+
Sbjct: 242 YCLSRKKVEELAAVLLANDIKAAPYHAGLDSEVRSKTQDQFLMEDIDVIVATIAFGMGID 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRV-KHMISQGVAEQS 722
KPDVRFVIH+ +PKS+EGY+QE GRAGRDG+ C+++YS +D ++ K M + +AEQ
Sbjct: 302 KPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGICLVFYSRNDLKKLEKFMEGKPIAEQ- 360
Query: 723 PFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTC 782
+ GR L TE +Y E+ V CRR L L +FGE++ +C C
Sbjct: 361 ------------DIGRQLLQETE------AYAESSV-CRRKLLLHYFGEEYPKENCG-MC 400
Query: 783 DNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
DNC K+ IE + K ++E +K + F ++++ +G ++ H+H+ L+
Sbjct: 401 DNCRHPKTLIE--AKEPLKIVLEAIKELKENFRQEYVIDFVKGRATDDLRDHKHDELAFF 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
GAG+ + + ++R ++ ++ + V+ YG +LK+ +K I ++ ++
Sbjct: 459 GAGEKVDVKMWNPVVRQALLLGYIKKSVEN---YG----ILKLT-AKGERFIKSPESFMI 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
+L + ND + V L +L+S L+ LR
Sbjct: 511 ----------------------VLDAEFKDEPNDAEAYGGGAV---LDPELFSLLKALRK 545
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ + V Y +F + +L+ ++ P E+EL I G+G K +YG
Sbjct: 546 TVAHK--HDVPPYVVFQDVSLEQMAMMYPINEQELQNIQGVGAGKAKRYG---------- 593
Query: 1023 IKEFY 1027
KEFY
Sbjct: 594 -KEFY 597
>gi|218556387|ref|YP_002389301.1| ATP-dependent DNA helicase RecQ [Escherichia coli IAI1]
gi|218363156|emb|CAR00797.1| ATP-dependent DNA helicase [Escherichia coli IAI1]
Length = 609
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTCEQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|415831473|ref|ZP_11517190.1| ATP-dependent DNA helicase RecQ [Escherichia coli OK1357]
gi|417599262|ref|ZP_12249886.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3030-1]
gi|417669412|ref|ZP_12318948.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_O31]
gi|418943250|ref|ZP_13496459.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H43 str. T22]
gi|419280425|ref|ZP_13822664.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10E]
gi|419347603|ref|ZP_13888969.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13A]
gi|419352064|ref|ZP_13893390.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13B]
gi|419357538|ref|ZP_13898783.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13C]
gi|419362509|ref|ZP_13903714.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13D]
gi|419367635|ref|ZP_13908783.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13E]
gi|419372449|ref|ZP_13913555.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14A]
gi|419377952|ref|ZP_13918966.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14B]
gi|419383345|ref|ZP_13924284.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14C]
gi|419388582|ref|ZP_13929446.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14D]
gi|425424847|ref|ZP_18805992.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1288]
gi|323182595|gb|EFZ67999.1| ATP-dependent DNA helicase RecQ [Escherichia coli OK1357]
gi|345348758|gb|EGW81051.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3030-1]
gi|375321441|gb|EHS67277.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H43 str. T22]
gi|378124120|gb|EHW85532.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10E]
gi|378182454|gb|EHX43106.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13A]
gi|378195639|gb|EHX56135.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13C]
gi|378195725|gb|EHX56220.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13B]
gi|378198136|gb|EHX58608.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13D]
gi|378209534|gb|EHX69904.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC13E]
gi|378212157|gb|EHX72481.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14A]
gi|378214771|gb|EHX75074.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14B]
gi|378223929|gb|EHX84138.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14C]
gi|378227658|gb|EHX87827.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC14D]
gi|397783043|gb|EJK93905.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_O31]
gi|408340410|gb|EKJ54905.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1288]
Length = 609
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|432855825|ref|ZP_20083516.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE144]
gi|431397110|gb|ELG80571.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE144]
Length = 611
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLTHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|218550953|ref|YP_002384744.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii ATCC 35469]
gi|416900390|ref|ZP_11929665.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_7v]
gi|417117601|ref|ZP_11968462.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1.2741]
gi|422803414|ref|ZP_16851902.1| ATP-dependent DNA helicase RecQ [Escherichia coli M863]
gi|422808185|ref|ZP_16856611.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii B253]
gi|450195654|ref|ZP_21892608.1| ATP-dependent DNA helicase RecQ [Escherichia coli SEPT362]
gi|218358494|emb|CAQ91141.1| ATP-dependent DNA helicase [Escherichia fergusonii ATCC 35469]
gi|323964066|gb|EGB59556.1| ATP-dependent DNA helicase RecQ [Escherichia coli M863]
gi|324111045|gb|EGC05032.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii B253]
gi|327250673|gb|EGE62379.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_7v]
gi|386140145|gb|EIG81300.1| ATP-dependent DNA helicase RecQ [Escherichia coli 1.2741]
gi|449316195|gb|EMD06316.1| ATP-dependent DNA helicase RecQ [Escherichia coli SEPT362]
Length = 609
Score = 335 bits (859), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|15804414|ref|NP_290454.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EDL933]
gi|15834006|ref|NP_312779.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. Sakai]
gi|26250563|ref|NP_756603.1| ATP-dependent DNA helicase RecQ [Escherichia coli CFT073]
gi|91213348|ref|YP_543334.1| ATP-dependent DNA helicase RecQ [Escherichia coli UTI89]
gi|117626081|ref|YP_859404.1| ATP-dependent DNA helicase RecQ [Escherichia coli APEC O1]
gi|168750361|ref|ZP_02775383.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4113]
gi|168753724|ref|ZP_02778731.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4401]
gi|168763952|ref|ZP_02788959.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4501]
gi|168768108|ref|ZP_02793115.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4486]
gi|168775622|ref|ZP_02800629.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4196]
gi|168780726|ref|ZP_02805733.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4076]
gi|168786665|ref|ZP_02811672.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. EC869]
gi|168801109|ref|ZP_02826116.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. EC508]
gi|193065720|ref|ZP_03046785.1| ATP-dependent DNA helicase RecQ [Escherichia coli E22]
gi|193068067|ref|ZP_03049032.1| ATP-dependent DNA helicase RecQ [Escherichia coli E110019]
gi|194434028|ref|ZP_03066298.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1012]
gi|195938114|ref|ZP_03083496.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4024]
gi|208806062|ref|ZP_03248399.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4206]
gi|208812810|ref|ZP_03254139.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4045]
gi|208821321|ref|ZP_03261641.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4042]
gi|209400089|ref|YP_002273341.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4115]
gi|217325284|ref|ZP_03441368.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
TW14588]
gi|227888592|ref|ZP_04006397.1| ATP-dependent DNA helicase RecQ [Escherichia coli 83972]
gi|237702832|ref|ZP_04533313.1| ATP-dependent DNA helicase recQ [Escherichia sp. 3_2_53FAA]
gi|261225598|ref|ZP_05939879.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255644|ref|ZP_05948177.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
FRIK966]
gi|291285239|ref|YP_003502057.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str. CB9615]
gi|300818704|ref|ZP_07098911.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 107-1]
gi|300939956|ref|ZP_07154585.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 21-1]
gi|300950413|ref|ZP_07164336.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 116-1]
gi|300955172|ref|ZP_07167569.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 175-1]
gi|300985659|ref|ZP_07177546.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 45-1]
gi|301029039|ref|ZP_07192192.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 196-1]
gi|301047295|ref|ZP_07194381.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 185-1]
gi|301328411|ref|ZP_07221497.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 78-1]
gi|301646111|ref|ZP_07246011.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 146-1]
gi|306815139|ref|ZP_07449292.1| ATP-dependent DNA helicase RecQ [Escherichia coli NC101]
gi|331644555|ref|ZP_08345675.1| ATP-dependent DNA helicase RecQ [Escherichia coli H736]
gi|331655508|ref|ZP_08356501.1| ATP-dependent DNA helicase RecQ [Escherichia coli M718]
gi|331665474|ref|ZP_08366373.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA143]
gi|331675289|ref|ZP_08376040.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA280]
gi|332282668|ref|ZP_08395081.1| ATP-dependent DNA helicase recQ [Shigella sp. D9]
gi|386597646|ref|YP_006094046.1| RecQ familyATP-dependent DNA helicase [Escherichia coli DH1]
gi|386606401|ref|YP_006112701.1| ATP-dependent DNA helicase RecQ [Escherichia coli UM146]
gi|386626719|ref|YP_006146447.1| ATP-dependent DNA helicase [Escherichia coli O7:K1 str. CE10]
gi|386631763|ref|YP_006151483.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D i2']
gi|386636683|ref|YP_006156402.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D i14']
gi|387619114|ref|YP_006122136.1| ATP-dependent DNA helicase RecQ [Escherichia coli O83:H1 str. NRG
857C]
gi|387623474|ref|YP_006131102.1| ATP-dependent DNA helicase RecQ [Escherichia coli DH1]
gi|387885050|ref|YP_006315352.1| ATP-dependent DNA helicase RecQ [Escherichia coli Xuzhou21]
gi|415875441|ref|ZP_11542196.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 79-10]
gi|416261809|ref|ZP_11640557.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae CDC 74-1112]
gi|416284789|ref|ZP_11647410.1| ATP-dependent DNA helicase RecQ [Shigella boydii ATCC 9905]
gi|416307593|ref|ZP_11654634.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. 1044]
gi|416319727|ref|ZP_11662279.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC1212]
gi|416326935|ref|ZP_11667010.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. 1125]
gi|416778771|ref|ZP_11876102.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. G5101]
gi|416790129|ref|ZP_11880995.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str.
493-89]
gi|416801903|ref|ZP_11885883.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str. H
2687]
gi|416812763|ref|ZP_11890805.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
3256-97]
gi|416823216|ref|ZP_11895422.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str. USDA
5905]
gi|416833537|ref|ZP_11900417.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
LSU-61]
gi|417087782|ref|ZP_11954640.1| ATP-dependent DNA helicase RecQ [Escherichia coli cloneA_i1]
gi|417125722|ref|ZP_11973683.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0246]
gi|417135031|ref|ZP_11979816.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0588]
gi|417156682|ref|ZP_11994306.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0497]
gi|417169247|ref|ZP_12001502.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0741]
gi|417249485|ref|ZP_12041269.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0967]
gi|417265179|ref|ZP_12052558.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.3916]
gi|417273258|ref|ZP_12060605.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.4168]
gi|417279255|ref|ZP_12066565.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2303]
gi|417293640|ref|ZP_12080919.1| ATP-dependent DNA helicase RecQ [Escherichia coli B41]
gi|417296259|ref|ZP_12083506.1| ATP-dependent DNA helicase RecQ [Escherichia coli 900105 (10e)]
gi|417868124|ref|ZP_12513155.1| hypothetical protein C22711_5047 [Escherichia coli O104:H4 str.
C227-11]
gi|418040283|ref|ZP_12678529.1| ATP-dependent DNA helicase RecQ [Escherichia coli W26]
gi|418960294|ref|ZP_13512185.1| ATP-dependent DNA helicase RecQ [Escherichia coli J53]
gi|419804829|ref|ZP_14329980.1| ATP-dependent DNA helicase RecQ [Escherichia coli AI27]
gi|419926606|ref|ZP_14444357.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-1]
gi|419943310|ref|ZP_14459870.1| ATP-dependent DNA helicase RecQ [Escherichia coli HM605]
gi|421777493|ref|ZP_16214088.1| ATP-dependent DNA helicase RecQ [Escherichia coli AD30]
gi|422361452|ref|ZP_16442074.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 110-3]
gi|422364103|ref|ZP_16444631.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 153-1]
gi|422752068|ref|ZP_16805973.1| ATP-dependent DNA helicase RecQ [Escherichia coli H252]
gi|422757541|ref|ZP_16811359.1| ATP-dependent DNA helicase RecQ [Escherichia coli H263]
gi|422764373|ref|ZP_16818123.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1167]
gi|422773902|ref|ZP_16827583.1| ATP-dependent DNA helicase RecQ [Escherichia coli E482]
gi|422818975|ref|ZP_16867187.1| ATP-dependent DNA helicase recQ [Escherichia coli M919]
gi|422836240|ref|ZP_16884288.1| ATP-dependent DNA helicase recQ [Escherichia coli E101]
gi|422842112|ref|ZP_16890078.1| ATP-dependent DNA helicase recQ [Escherichia coli H397]
gi|422963299|ref|ZP_16973143.1| ATP-dependent DNA helicase recQ [Escherichia coli H494]
gi|422990089|ref|ZP_16980861.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C227-11]
gi|422996987|ref|ZP_16987749.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C236-11]
gi|423002081|ref|ZP_16992833.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
09-7901]
gi|423005737|ref|ZP_16996482.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
04-8351]
gi|423012298|ref|ZP_17003030.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-3677]
gi|423021529|ref|ZP_17012234.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4404]
gi|423026687|ref|ZP_17017381.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4522]
gi|423032514|ref|ZP_17023200.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4623]
gi|423035353|ref|ZP_17026030.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423040509|ref|ZP_17031178.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423047194|ref|ZP_17037853.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423055733|ref|ZP_17044539.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423057736|ref|ZP_17046535.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423703345|ref|ZP_17677777.1| ATP-dependent DNA helicase recQ [Escherichia coli H730]
gi|427807018|ref|ZP_18974085.1| ATP-dependent DNA helicase [Escherichia coli chi7122]
gi|427811606|ref|ZP_18978671.1| ATP-dependent DNA helicase [Escherichia coli]
gi|429721569|ref|ZP_19256483.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429773463|ref|ZP_19305477.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02030]
gi|429778828|ref|ZP_19310793.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02033-1]
gi|429782663|ref|ZP_19314587.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02092]
gi|429788056|ref|ZP_19319942.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02093]
gi|429794495|ref|ZP_19326335.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02281]
gi|429800455|ref|ZP_19332243.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02318]
gi|429804067|ref|ZP_19335823.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02913]
gi|429808715|ref|ZP_19340430.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03439]
gi|429814414|ref|ZP_19346084.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-04080]
gi|429819617|ref|ZP_19351246.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03943]
gi|429905937|ref|ZP_19371912.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910070|ref|ZP_19376031.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429915970|ref|ZP_19381915.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921018|ref|ZP_19386944.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429926826|ref|ZP_19392736.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429930757|ref|ZP_19396656.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429937299|ref|ZP_19403184.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429942978|ref|ZP_19408849.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429945657|ref|ZP_19411516.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429953220|ref|ZP_19419064.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429956566|ref|ZP_19422396.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432360276|ref|ZP_19603487.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE4]
gi|432365076|ref|ZP_19608229.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE5]
gi|432367297|ref|ZP_19610409.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE10]
gi|432383719|ref|ZP_19626643.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE15]
gi|432389627|ref|ZP_19632505.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE16]
gi|432394491|ref|ZP_19637307.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE21]
gi|432414086|ref|ZP_19656738.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE39]
gi|432419345|ref|ZP_19661934.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE44]
gi|432434048|ref|ZP_19676469.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE187]
gi|432438779|ref|ZP_19681155.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE188]
gi|432443352|ref|ZP_19685684.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE189]
gi|432448496|ref|ZP_19690791.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE191]
gi|432452089|ref|ZP_19694343.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE193]
gi|432458964|ref|ZP_19701137.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE201]
gi|432483235|ref|ZP_19725182.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE210]
gi|432487578|ref|ZP_19729484.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE212]
gi|432493074|ref|ZP_19734902.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE214]
gi|432506714|ref|ZP_19748431.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE220]
gi|432516211|ref|ZP_19753425.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE224]
gi|432526295|ref|ZP_19763406.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE230]
gi|432528681|ref|ZP_19765751.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE233]
gi|432571096|ref|ZP_19807600.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE53]
gi|432576067|ref|ZP_19812534.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE55]
gi|432578095|ref|ZP_19814540.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE56]
gi|432590276|ref|ZP_19826626.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE58]
gi|432595035|ref|ZP_19831345.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE60]
gi|432600079|ref|ZP_19836347.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE62]
gi|432605259|ref|ZP_19841468.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE67]
gi|432613825|ref|ZP_19849981.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE72]
gi|432629445|ref|ZP_19865409.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE77]
gi|432634727|ref|ZP_19870624.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE81]
gi|432648493|ref|ZP_19884277.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE86]
gi|432653476|ref|ZP_19889212.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE87]
gi|432658058|ref|ZP_19893754.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE93]
gi|432663070|ref|ZP_19898697.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE111]
gi|432672915|ref|ZP_19908432.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE119]
gi|432677001|ref|ZP_19912440.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE142]
gi|432687652|ref|ZP_19922939.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE156]
gi|432689149|ref|ZP_19924414.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE161]
gi|432701337|ref|ZP_19936480.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE169]
gi|432706554|ref|ZP_19941647.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE171]
gi|432739319|ref|ZP_19974046.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE42]
gi|432747796|ref|ZP_19982457.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE43]
gi|432752279|ref|ZP_19986855.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE29]
gi|432756779|ref|ZP_19991322.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE22]
gi|432768201|ref|ZP_20002590.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE50]
gi|432780984|ref|ZP_20015199.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE59]
gi|432785808|ref|ZP_20019983.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE63]
gi|432789848|ref|ZP_20023974.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE65]
gi|432795081|ref|ZP_20029152.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE78]
gi|432796592|ref|ZP_20030625.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE79]
gi|432808068|ref|ZP_20041980.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE91]
gi|432818612|ref|ZP_20052333.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE118]
gi|432824744|ref|ZP_20058407.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE123]
gi|432847043|ref|ZP_20079554.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE141]
gi|432866699|ref|ZP_20089036.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE146]
gi|432878187|ref|ZP_20095636.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE154]
gi|432907645|ref|ZP_20116028.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE194]
gi|432931567|ref|ZP_20131599.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE184]
gi|432940641|ref|ZP_20138542.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE183]
gi|432943514|ref|ZP_20140349.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE196]
gi|432951080|ref|ZP_20144823.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE197]
gi|432964632|ref|ZP_20153702.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE202]
gi|432974095|ref|ZP_20162937.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE207]
gi|432976046|ref|ZP_20164877.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE209]
gi|432987668|ref|ZP_20176378.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE215]
gi|432997605|ref|ZP_20186184.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE218]
gi|433002200|ref|ZP_20190717.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE223]
gi|433002724|ref|ZP_20191232.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE227]
gi|433010024|ref|ZP_20198434.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE229]
gi|433016140|ref|ZP_20204466.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE104]
gi|433025731|ref|ZP_20213696.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE106]
gi|433035751|ref|ZP_20223437.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE112]
gi|433040839|ref|ZP_20228423.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE113]
gi|433045355|ref|ZP_20232827.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE117]
gi|433050297|ref|ZP_20237614.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE120]
gi|433060346|ref|ZP_20247376.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE124]
gi|433065296|ref|ZP_20252196.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE125]
gi|433084749|ref|ZP_20271193.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE133]
gi|433089549|ref|ZP_20275906.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE137]
gi|433103420|ref|ZP_20289488.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE145]
gi|433117753|ref|ZP_20303531.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE153]
gi|433127456|ref|ZP_20312995.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE160]
gi|433132402|ref|ZP_20317821.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE163]
gi|433137074|ref|ZP_20322396.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE166]
gi|433141529|ref|ZP_20326765.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE167]
gi|433146459|ref|ZP_20331588.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE168]
gi|433151482|ref|ZP_20336476.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE174]
gi|433156014|ref|ZP_20340937.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE176]
gi|433165840|ref|ZP_20350564.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE179]
gi|433170836|ref|ZP_20355450.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE180]
gi|433175714|ref|ZP_20360216.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE232]
gi|433190628|ref|ZP_20374713.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE88]
gi|433195880|ref|ZP_20379845.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE90]
gi|433200586|ref|ZP_20384466.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE94]
gi|433209973|ref|ZP_20393634.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE97]
gi|433214852|ref|ZP_20398424.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE99]
gi|442591349|ref|ZP_21009834.1| ATP-dependent DNA helicase RecQ [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|442603448|ref|ZP_21018338.1| ATP-dependent DNA helicase RecQ [Escherichia coli Nissle 1917]
gi|452967363|ref|ZP_21965590.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4009]
gi|12518696|gb|AAG59018.1|AE005613_11 ATP-dependent DNA helicase [Escherichia coli O157:H7 str. EDL933]
gi|26110993|gb|AAN83177.1|AE016769_292 ATP-dependent DNA helicase recQ [Escherichia coli CFT073]
gi|13364228|dbj|BAB38175.1| ATP-dependent DNA helicase [Escherichia coli O157:H7 str. Sakai]
gi|91074922|gb|ABE09803.1| ATP-dependent DNA helicase [Escherichia coli UTI89]
gi|115515205|gb|ABJ03280.1| ATP-dependent DNA helicase [Escherichia coli APEC O1]
gi|187768838|gb|EDU32682.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4196]
gi|188015421|gb|EDU53543.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4113]
gi|189001596|gb|EDU70582.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4076]
gi|189358975|gb|EDU77394.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4401]
gi|189362723|gb|EDU81142.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4486]
gi|189365963|gb|EDU84379.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4501]
gi|189373237|gb|EDU91653.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. EC869]
gi|189376685|gb|EDU95101.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. EC508]
gi|192926687|gb|EDV81316.1| ATP-dependent DNA helicase RecQ [Escherichia coli E22]
gi|192958687|gb|EDV89125.1| ATP-dependent DNA helicase RecQ [Escherichia coli E110019]
gi|194417686|gb|EDX33785.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1012]
gi|208725863|gb|EDZ75464.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4206]
gi|208734087|gb|EDZ82774.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4045]
gi|208741444|gb|EDZ89126.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4042]
gi|209161489|gb|ACI38922.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4115]
gi|209753168|gb|ACI74891.1| threonine efflux protein [Escherichia coli]
gi|209753170|gb|ACI74892.1| threonine efflux protein [Escherichia coli]
gi|209753172|gb|ACI74893.1| threonine efflux protein [Escherichia coli]
gi|209753174|gb|ACI74894.1| threonine efflux protein [Escherichia coli]
gi|209753176|gb|ACI74895.1| threonine efflux protein [Escherichia coli]
gi|217321505|gb|EEC29929.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
TW14588]
gi|226903003|gb|EEH89262.1| ATP-dependent DNA helicase recQ [Escherichia sp. 3_2_53FAA]
gi|227834431|gb|EEJ44897.1| ATP-dependent DNA helicase RecQ [Escherichia coli 83972]
gi|260451335|gb|ACX41757.1| ATP-dependent DNA helicase, RecQ family [Escherichia coli DH1]
gi|290765112|gb|ADD59073.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str. CB9615]
gi|299878002|gb|EFI86213.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 196-1]
gi|300300814|gb|EFJ57199.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 185-1]
gi|300317889|gb|EFJ67673.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 175-1]
gi|300408043|gb|EFJ91581.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 45-1]
gi|300450259|gb|EFK13879.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 116-1]
gi|300455218|gb|EFK18711.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 21-1]
gi|300528670|gb|EFK49732.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 107-1]
gi|300845161|gb|EFK72921.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 78-1]
gi|301075637|gb|EFK90443.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 146-1]
gi|305851508|gb|EFM51962.1| ATP-dependent DNA helicase RecQ [Escherichia coli NC101]
gi|307628885|gb|ADN73189.1| ATP-dependent DNA helicase RecQ [Escherichia coli UM146]
gi|312948375|gb|ADR29202.1| ATP-dependent DNA helicase RecQ [Escherichia coli O83:H1 str. NRG
857C]
gi|315138398|dbj|BAJ45557.1| ATP-dependent DNA helicase RecQ [Escherichia coli DH1]
gi|315284755|gb|EFU44200.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 110-3]
gi|315293200|gb|EFU52552.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 153-1]
gi|320176754|gb|EFW51788.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae CDC 74-1112]
gi|320179831|gb|EFW54778.1| ATP-dependent DNA helicase RecQ [Shigella boydii ATCC 9905]
gi|320191083|gb|EFW65733.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC1212]
gi|320639307|gb|EFX08929.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. G5101]
gi|320644692|gb|EFX13742.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str.
493-89]
gi|320650017|gb|EFX18520.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str. H
2687]
gi|320655364|gb|EFX23306.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320660989|gb|EFX28432.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str. USDA
5905]
gi|320666113|gb|EFX33127.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
LSU-61]
gi|323938957|gb|EGB35176.1| ATP-dependent DNA helicase RecQ [Escherichia coli E482]
gi|323949294|gb|EGB45184.1| ATP-dependent DNA helicase RecQ [Escherichia coli H252]
gi|323954029|gb|EGB49827.1| ATP-dependent DNA helicase RecQ [Escherichia coli H263]
gi|324115715|gb|EGC09650.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1167]
gi|326344280|gb|EGD68040.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. 1125]
gi|326347892|gb|EGD71606.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str. 1044]
gi|331036227|gb|EGI08462.1| ATP-dependent DNA helicase RecQ [Escherichia coli H736]
gi|331046829|gb|EGI18913.1| ATP-dependent DNA helicase RecQ [Escherichia coli M718]
gi|331057372|gb|EGI29361.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA143]
gi|331067575|gb|EGI38979.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA280]
gi|332105020|gb|EGJ08366.1| ATP-dependent DNA helicase recQ [Shigella sp. D9]
gi|341921413|gb|EGT71013.1| hypothetical protein C22711_5047 [Escherichia coli O104:H4 str.
C227-11]
gi|342929411|gb|EGU98133.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 79-10]
gi|349740455|gb|AEQ15161.1| ATP-dependent DNA helicase [Escherichia coli O7:K1 str. CE10]
gi|354857604|gb|EHF18058.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C236-11]
gi|354861156|gb|EHF21596.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C227-11]
gi|354862964|gb|EHF23400.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
04-8351]
gi|354870560|gb|EHF30963.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
09-7901]
gi|354876413|gb|EHF36774.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-3677]
gi|354885260|gb|EHF45564.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4404]
gi|354888660|gb|EHF48915.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4522]
gi|354892140|gb|EHF52353.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4623]
gi|354904405|gb|EHF64498.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354907666|gb|EHF67724.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354910042|gb|EHF70071.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354912556|gb|EHF72556.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354920351|gb|EHF80286.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C5]
gi|355349511|gb|EHF98716.1| ATP-dependent DNA helicase RecQ [Escherichia coli cloneA_i1]
gi|355422662|gb|AER86859.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D i2']
gi|355427582|gb|AER91778.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D i14']
gi|371591795|gb|EHN80734.1| ATP-dependent DNA helicase recQ [Escherichia coli H494]
gi|371602176|gb|EHN90887.1| ATP-dependent DNA helicase recQ [Escherichia coli H397]
gi|371609589|gb|EHN98126.1| ATP-dependent DNA helicase recQ [Escherichia coli E101]
gi|383476777|gb|EID68710.1| ATP-dependent DNA helicase RecQ [Escherichia coli W26]
gi|384376901|gb|EIE34801.1| ATP-dependent DNA helicase RecQ [Escherichia coli J53]
gi|384472213|gb|EIE56273.1| ATP-dependent DNA helicase RecQ [Escherichia coli AI27]
gi|385537533|gb|EIF84404.1| ATP-dependent DNA helicase recQ [Escherichia coli M919]
gi|385708484|gb|EIG45496.1| ATP-dependent DNA helicase recQ [Escherichia coli H730]
gi|386145721|gb|EIG92178.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0246]
gi|386152885|gb|EIH04174.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0588]
gi|386165432|gb|EIH31952.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0497]
gi|386170387|gb|EIH42447.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0741]
gi|386219806|gb|EII36270.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0967]
gi|386221361|gb|EII43805.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.3916]
gi|386234435|gb|EII66413.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.4168]
gi|386238032|gb|EII74972.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2303]
gi|386251828|gb|EIJ01520.1| ATP-dependent DNA helicase RecQ [Escherichia coli B41]
gi|386259703|gb|EIJ15177.1| ATP-dependent DNA helicase RecQ [Escherichia coli 900105 (10e)]
gi|386798508|gb|AFJ31542.1| ATP-dependent DNA helicase RecQ [Escherichia coli Xuzhou21]
gi|388409130|gb|EIL69452.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-1]
gi|388421322|gb|EIL80939.1| ATP-dependent DNA helicase RecQ [Escherichia coli HM605]
gi|408457407|gb|EKJ81203.1| ATP-dependent DNA helicase RecQ [Escherichia coli AD30]
gi|412965200|emb|CCK49130.1| ATP-dependent DNA helicase [Escherichia coli chi7122]
gi|412971785|emb|CCJ46450.1| ATP-dependent DNA helicase [Escherichia coli]
gi|429355564|gb|EKY92252.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02030]
gi|429355754|gb|EKY92439.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02033-1]
gi|429357134|gb|EKY93808.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02092]
gi|429371198|gb|EKZ07757.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02093]
gi|429371402|gb|EKZ07959.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02281]
gi|429375432|gb|EKZ11967.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02318]
gi|429387228|gb|EKZ23670.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02913]
gi|429389790|gb|EKZ26209.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03439]
gi|429390496|gb|EKZ26908.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03943]
gi|429400930|gb|EKZ37241.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-04080]
gi|429401897|gb|EKZ38191.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429404472|gb|EKZ40747.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429412703|gb|EKZ48894.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429415644|gb|EKZ51805.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429422963|gb|EKZ59072.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429427510|gb|EKZ63592.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429431815|gb|EKZ67858.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429439320|gb|EKZ75307.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429443687|gb|EKZ79637.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429448312|gb|EKZ84227.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429454076|gb|EKZ89941.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429458539|gb|EKZ94363.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430873088|gb|ELB96667.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE4]
gi|430883034|gb|ELC06041.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE5]
gi|430890837|gb|ELC13397.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE10]
gi|430903003|gb|ELC24748.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE16]
gi|430903107|gb|ELC24851.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE15]
gi|430913882|gb|ELC35001.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE21]
gi|430932536|gb|ELC52957.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE39]
gi|430935905|gb|ELC56200.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE44]
gi|430949889|gb|ELC69284.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE187]
gi|430959658|gb|ELC77969.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE188]
gi|430962773|gb|ELC80625.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE189]
gi|430970881|gb|ELC87926.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE191]
gi|430977239|gb|ELC94090.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE193]
gi|430978984|gb|ELC95773.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE201]
gi|431003540|gb|ELD19023.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE210]
gi|431013410|gb|ELD27143.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE212]
gi|431030698|gb|ELD43704.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE214]
gi|431034609|gb|ELD46535.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE220]
gi|431037921|gb|ELD48891.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE224]
gi|431047355|gb|ELD57356.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE230]
gi|431059796|gb|ELD69143.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE233]
gi|431096876|gb|ELE02331.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE53]
gi|431104206|gb|ELE08809.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE55]
gi|431111518|gb|ELE15417.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE56]
gi|431117383|gb|ELE20622.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE58]
gi|431125535|gb|ELE27937.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE60]
gi|431127306|gb|ELE29608.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE62]
gi|431144281|gb|ELE45988.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE67]
gi|431146062|gb|ELE47661.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE72]
gi|431160135|gb|ELE60653.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE77]
gi|431175867|gb|ELE75854.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE81]
gi|431177503|gb|ELE77427.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE86]
gi|431186593|gb|ELE86133.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE87]
gi|431188169|gb|ELE87668.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE93]
gi|431196510|gb|ELE95436.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE111]
gi|431207204|gb|ELF05474.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE119]
gi|431209667|gb|ELF07738.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE142]
gi|431218899|gb|ELF16324.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE156]
gi|431234396|gb|ELF29797.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE161]
gi|431239716|gb|ELF34188.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE169]
gi|431239876|gb|ELF34342.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE171]
gi|431278992|gb|ELF69963.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE42]
gi|431289696|gb|ELF80437.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE43]
gi|431293209|gb|ELF83589.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE29]
gi|431299667|gb|ELF89238.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE22]
gi|431321465|gb|ELG09066.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE50]
gi|431323834|gb|ELG11300.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE59]
gi|431325714|gb|ELG13095.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE63]
gi|431335017|gb|ELG22161.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE65]
gi|431335488|gb|ELG22626.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE78]
gi|431347763|gb|ELG34641.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE79]
gi|431352550|gb|ELG39319.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE91]
gi|431373433|gb|ELG59039.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE118]
gi|431377686|gb|ELG62812.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE123]
gi|431392085|gb|ELG75688.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE141]
gi|431400822|gb|ELG84186.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE146]
gi|431417427|gb|ELG99890.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE154]
gi|431427140|gb|ELH09183.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE194]
gi|431459357|gb|ELH39670.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE184]
gi|431459691|gb|ELH39983.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE183]
gi|431466733|gb|ELH46750.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE196]
gi|431467349|gb|ELH47359.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE202]
gi|431477546|gb|ELH57314.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE197]
gi|431478399|gb|ELH58147.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE207]
gi|431485180|gb|ELH64844.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE209]
gi|431493841|gb|ELH73433.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE215]
gi|431501796|gb|ELH80772.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE218]
gi|431504472|gb|ELH83098.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE223]
gi|431520867|gb|ELH98186.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE229]
gi|431521765|gb|ELH99004.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE227]
gi|431526226|gb|ELI02985.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE104]
gi|431530167|gb|ELI06852.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE106]
gi|431545604|gb|ELI20252.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE112]
gi|431547922|gb|ELI22215.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE113]
gi|431551988|gb|ELI25951.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE117]
gi|431561551|gb|ELI34918.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE120]
gi|431565593|gb|ELI38672.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE124]
gi|431577598|gb|ELI50229.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE125]
gi|431597335|gb|ELI67242.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE133]
gi|431600495|gb|ELI70165.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE137]
gi|431615751|gb|ELI84873.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE145]
gi|431630352|gb|ELI98689.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE153]
gi|431639691|gb|ELJ07541.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE160]
gi|431642027|gb|ELJ09753.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE163]
gi|431653007|gb|ELJ20124.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE166]
gi|431655382|gb|ELJ22415.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE167]
gi|431657099|gb|ELJ24067.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE168]
gi|431666796|gb|ELJ33421.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE174]
gi|431669744|gb|ELJ36113.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE176]
gi|431683122|gb|ELJ48761.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE179]
gi|431683735|gb|ELJ49363.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE180]
gi|431687667|gb|ELJ53211.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE232]
gi|431701585|gb|ELJ66500.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE88]
gi|431712921|gb|ELJ77188.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE90]
gi|431716632|gb|ELJ80739.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE94]
gi|431727917|gb|ELJ91647.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE97]
gi|431731295|gb|ELJ94801.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE99]
gi|441608587|emb|CCP95671.1| ATP-dependent DNA helicase RecQ [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|441715872|emb|CCQ04315.1| ATP-dependent DNA helicase RecQ [Escherichia coli Nissle 1917]
Length = 611
Score = 335 bits (859), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|417604728|ref|ZP_12255290.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_94C]
gi|345347248|gb|EGW79562.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_94C]
Length = 609
Score = 335 bits (859), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|30064881|ref|NP_839052.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 2457T]
gi|56480445|ref|NP_709628.2| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 301]
gi|384545430|ref|YP_005729494.1| ATP-dependent DNA helicase [Shigella flexneri 2002017]
gi|30043141|gb|AAP18863.1| ATP-dependent DNA helicase [Shigella flexneri 2a str. 2457T]
gi|56383996|gb|AAN45335.2| ATP-dependent DNA helicase [Shigella flexneri 2a str. 301]
gi|281603217|gb|ADA76201.1| ATP-dependent DNA helicase [Shigella flexneri 2002017]
Length = 611
Score = 335 bits (859), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|387614520|ref|YP_006117636.1| ATP-dependent DNA helicase [Escherichia coli ETEC H10407]
gi|309704256|emb|CBJ03604.1| ATP-dependent DNA helicase [Escherichia coli ETEC H10407]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKPGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|74314334|ref|YP_312753.1| ATP-dependent DNA helicase RecQ [Shigella sonnei Ss046]
gi|157163298|ref|YP_001460616.1| ATP-dependent DNA helicase RecQ [Escherichia coli HS]
gi|162135918|ref|YP_026263.3| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
MG1655]
gi|170083303|ref|YP_001732623.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. K-12 substr.
DH10B]
gi|187734194|ref|YP_001882520.1| ATP-dependent DNA helicase RecQ [Shigella boydii CDC 3083-94]
gi|188494940|ref|ZP_03002210.1| ATP-dependent DNA helicase RecQ [Escherichia coli 53638]
gi|218697543|ref|YP_002405210.1| ATP-dependent DNA helicase RecQ [Escherichia coli 55989]
gi|218701485|ref|YP_002409114.1| ATP-dependent DNA helicase RecQ [Escherichia coli IAI39]
gi|222158515|ref|YP_002558654.1| ATP-dependent DNA helicase recQ [Escherichia coli LF82]
gi|238902897|ref|YP_002928693.1| ATP-dependent DNA helicase RecQ [Escherichia coli BW2952]
gi|254795820|ref|YP_003080657.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
TW14359]
gi|260857772|ref|YP_003231663.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str. 11368]
gi|293468140|ref|ZP_06664552.1| ATP-dependent DNA helicase RecQ [Escherichia coli B088]
gi|383181074|ref|YP_005459079.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 53G]
gi|386601849|ref|YP_006103355.1| ATP-dependent DNA helicase RecQ [Escherichia coli IHE3034]
gi|386616632|ref|YP_006136298.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNK88]
gi|386641456|ref|YP_006108254.1| ATP-dependent DNA helicase RecQ [Escherichia coli ABU 83972]
gi|387509272|ref|YP_006161528.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
RM12579]
gi|387609630|ref|YP_006098486.1| ATP-dependent DNA helicase [Escherichia coli 042]
gi|388479428|ref|YP_491620.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr. W3110]
gi|407466829|ref|YP_006786729.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407484445|ref|YP_006781595.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2011C-3493]
gi|410484991|ref|YP_006772537.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414578705|ref|ZP_11435867.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3233-85]
gi|415773800|ref|ZP_11486365.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3431]
gi|415786023|ref|ZP_11493337.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPECa14]
gi|415811064|ref|ZP_11503414.1| ATP-dependent DNA helicase RecQ [Escherichia coli LT-68]
gi|415846355|ref|ZP_11525434.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 53G]
gi|417583446|ref|ZP_12234244.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_B2F1]
gi|417615484|ref|ZP_12265932.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_EH250]
gi|417620493|ref|ZP_12270894.1| ATP-dependent DNA helicase RecQ [Escherichia coli G58-1]
gi|417631303|ref|ZP_12281535.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_MHI813]
gi|417636778|ref|ZP_12286983.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_S1191]
gi|417641842|ref|ZP_12291966.1| ATP-dependent DNA helicase RecQ [Escherichia coli TX1999]
gi|417675001|ref|ZP_12324430.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 155-74]
gi|417709647|ref|ZP_12358664.1| ATP-dependent DNA helicase RecQ [Shigella flexneri VA-6]
gi|417807513|ref|ZP_12454440.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
LB226692]
gi|417829992|ref|ZP_12476531.1| ATP-dependent DNA helicase RecQ [Shigella flexneri J1713]
gi|417835254|ref|ZP_12481693.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
01-09591]
gi|417945670|ref|ZP_12588900.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH140A]
gi|417977689|ref|ZP_12618470.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH001]
gi|418269891|ref|ZP_12888068.1| ATP-dependent DNA helicase RecQ [Shigella sonnei str. Moseley]
gi|418305454|ref|ZP_12917248.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNF18]
gi|419043191|ref|ZP_13590168.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3A]
gi|419053701|ref|ZP_13600566.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3B]
gi|419059737|ref|ZP_13606535.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3C]
gi|419065783|ref|ZP_13612482.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3D]
gi|419072168|ref|ZP_13617765.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3E]
gi|419077975|ref|ZP_13623471.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3F]
gi|419083146|ref|ZP_13628587.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4A]
gi|419089130|ref|ZP_13634478.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4B]
gi|419094916|ref|ZP_13640190.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4C]
gi|419100733|ref|ZP_13645918.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4D]
gi|419101663|ref|ZP_13646838.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4E]
gi|419112709|ref|ZP_13657750.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4F]
gi|419117387|ref|ZP_13662394.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5A]
gi|419123336|ref|ZP_13668272.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5B]
gi|419128635|ref|ZP_13673503.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5C]
gi|419134045|ref|ZP_13678868.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5D]
gi|419139187|ref|ZP_13683976.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5E]
gi|419144930|ref|ZP_13689656.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6A]
gi|419150857|ref|ZP_13695502.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6B]
gi|419156337|ref|ZP_13700890.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6C]
gi|419161695|ref|ZP_13706184.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6D]
gi|419166788|ref|ZP_13711235.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6E]
gi|419172782|ref|ZP_13716653.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7A]
gi|419177507|ref|ZP_13721313.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7B]
gi|419183343|ref|ZP_13726948.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7C]
gi|419188957|ref|ZP_13732459.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7D]
gi|419193893|ref|ZP_13737331.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7E]
gi|419212347|ref|ZP_13755409.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8C]
gi|419218190|ref|ZP_13761179.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8D]
gi|419229300|ref|ZP_13772135.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9A]
gi|419235104|ref|ZP_13777867.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9B]
gi|419240508|ref|ZP_13783209.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9C]
gi|419245923|ref|ZP_13788552.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9D]
gi|419251927|ref|ZP_13794490.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9E]
gi|419257379|ref|ZP_13799876.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10A]
gi|419263508|ref|ZP_13805912.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10B]
gi|419264798|ref|ZP_13807187.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10C]
gi|419270449|ref|ZP_13812783.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10D]
gi|419286604|ref|ZP_13828763.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10F]
gi|419292039|ref|ZP_13834121.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11A]
gi|419297319|ref|ZP_13839353.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11B]
gi|419308855|ref|ZP_13850743.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11D]
gi|419393861|ref|ZP_13934658.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15A]
gi|419399220|ref|ZP_13939979.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15B]
gi|419404466|ref|ZP_13945182.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15C]
gi|419409630|ref|ZP_13950311.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15D]
gi|419415188|ref|ZP_13955818.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15E]
gi|419812399|ref|ZP_14337266.1| ATP-dependent DNA helicase RecQ [Escherichia coli O32:H37 str. P4]
gi|419874689|ref|ZP_14396603.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9534]
gi|419879645|ref|ZP_14401076.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9545]
gi|419902626|ref|ZP_14421829.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9942]
gi|419905653|ref|ZP_14424609.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10026]
gi|420099093|ref|ZP_14610339.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9455]
gi|420110650|ref|ZP_14620605.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9553]
gi|420113527|ref|ZP_14623259.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10021]
gi|420119768|ref|ZP_14629022.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10030]
gi|420126752|ref|ZP_14635465.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10224]
gi|420131499|ref|ZP_14639935.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9952]
gi|420272370|ref|ZP_14774716.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA22]
gi|420277955|ref|ZP_14780233.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA40]
gi|420283156|ref|ZP_14785386.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW06591]
gi|420284102|ref|ZP_14786323.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10246]
gi|420289859|ref|ZP_14792029.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW11039]
gi|420300926|ref|ZP_14802968.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09109]
gi|420306852|ref|ZP_14808837.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10119]
gi|420312140|ref|ZP_14814065.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1738]
gi|420317897|ref|ZP_14819765.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1734]
gi|420322644|ref|ZP_14824463.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2850-71]
gi|420333543|ref|ZP_14835179.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-1770]
gi|420349685|ref|ZP_14851058.1| ATP-dependent DNA helicase RecQ [Shigella boydii 965-58]
gi|420361261|ref|ZP_14862203.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3226-85]
gi|420365796|ref|ZP_14866655.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 4822-66]
gi|420382758|ref|ZP_14882188.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 225-75]
gi|421814877|ref|ZP_16250576.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0416]
gi|421820625|ref|ZP_16256107.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0821]
gi|421826602|ref|ZP_16261954.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK920]
gi|421833458|ref|ZP_16268735.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA7]
gi|423728051|ref|ZP_17701830.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA31]
gi|424080156|ref|ZP_17817094.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA505]
gi|424086551|ref|ZP_17823020.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA517]
gi|424092965|ref|ZP_17828872.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1996]
gi|424099656|ref|ZP_17834892.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1985]
gi|424105849|ref|ZP_17840562.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1990]
gi|424112488|ref|ZP_17846698.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93-001]
gi|424118422|ref|ZP_17852240.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA3]
gi|424124621|ref|ZP_17857901.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA5]
gi|424130785|ref|ZP_17863671.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA9]
gi|424137098|ref|ZP_17869517.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA10]
gi|424143655|ref|ZP_17875490.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA14]
gi|424150024|ref|ZP_17881383.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA15]
gi|424163751|ref|ZP_17886802.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA24]
gi|424257401|ref|ZP_17892343.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA25]
gi|424336089|ref|ZP_17898279.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA28]
gi|424452358|ref|ZP_17903983.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA32]
gi|424458522|ref|ZP_17909602.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA33]
gi|424465052|ref|ZP_17915355.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA39]
gi|424471287|ref|ZP_17921068.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA41]
gi|424477774|ref|ZP_17927073.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA42]
gi|424483558|ref|ZP_17932522.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07945]
gi|424489753|ref|ZP_17938273.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09098]
gi|424496448|ref|ZP_17943963.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09195]
gi|424503074|ref|ZP_17949941.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4203]
gi|424509345|ref|ZP_17955696.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4196]
gi|424516755|ref|ZP_17961322.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14313]
gi|424522879|ref|ZP_17966967.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14301]
gi|424528750|ref|ZP_17972445.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4421]
gi|424534892|ref|ZP_17978224.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4422]
gi|424540980|ref|ZP_17983908.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4013]
gi|424547130|ref|ZP_17989443.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4402]
gi|424553325|ref|ZP_17995135.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4439]
gi|424559526|ref|ZP_18000903.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4436]
gi|424565847|ref|ZP_18006833.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4437]
gi|424571976|ref|ZP_18012493.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4448]
gi|424578134|ref|ZP_18018151.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1845]
gi|424583956|ref|ZP_18023586.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1863]
gi|424746311|ref|ZP_18174557.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756582|ref|ZP_18184393.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425100630|ref|ZP_18503350.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4870]
gi|425106704|ref|ZP_18509003.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.2239]
gi|425112706|ref|ZP_18514611.1| ATP-dependent DNA helicase RecQ [Escherichia coli 6.0172]
gi|425117443|ref|ZP_18519216.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0566]
gi|425122162|ref|ZP_18523834.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0569]
gi|425128636|ref|ZP_18529790.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0586]
gi|425134402|ref|ZP_18535238.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.2524]
gi|425140995|ref|ZP_18541361.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0833]
gi|425146671|ref|ZP_18546648.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0869]
gi|425152786|ref|ZP_18552384.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.0221]
gi|425158685|ref|ZP_18557932.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA34]
gi|425165005|ref|ZP_18563876.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA506]
gi|425170752|ref|ZP_18569210.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA507]
gi|425176796|ref|ZP_18574900.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA504]
gi|425182855|ref|ZP_18580536.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1999]
gi|425189156|ref|ZP_18586411.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1997]
gi|425195883|ref|ZP_18592638.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE1487]
gi|425202362|ref|ZP_18598555.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE037]
gi|425208739|ref|ZP_18604521.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK2001]
gi|425214496|ref|ZP_18609883.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA4]
gi|425220623|ref|ZP_18615570.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA23]
gi|425227269|ref|ZP_18621720.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA49]
gi|425233426|ref|ZP_18627450.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA45]
gi|425239348|ref|ZP_18633053.1| ATP-dependent DNA helicase RecQ [Escherichia coli TT12B]
gi|425245582|ref|ZP_18638874.1| ATP-dependent DNA helicase RecQ [Escherichia coli MA6]
gi|425251778|ref|ZP_18644706.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5905]
gi|425257577|ref|ZP_18650057.1| ATP-dependent DNA helicase RecQ [Escherichia coli CB7326]
gi|425263832|ref|ZP_18655808.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC96038]
gi|425269824|ref|ZP_18661435.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5412]
gi|425275115|ref|ZP_18666494.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW15901]
gi|425285691|ref|ZP_18676703.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW00353]
gi|425291039|ref|ZP_18681846.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3006]
gi|425297302|ref|ZP_18687410.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA38]
gi|425313995|ref|ZP_18703147.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1735]
gi|425319977|ref|ZP_18708738.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1736]
gi|425326116|ref|ZP_18714427.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1737]
gi|425332427|ref|ZP_18720224.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1846]
gi|425338604|ref|ZP_18725927.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1847]
gi|425344898|ref|ZP_18731771.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1848]
gi|425350737|ref|ZP_18737180.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1849]
gi|425357009|ref|ZP_18743055.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1850]
gi|425362958|ref|ZP_18748590.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1856]
gi|425369225|ref|ZP_18754286.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1862]
gi|425375530|ref|ZP_18760154.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1864]
gi|425382165|ref|ZP_18766145.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1865]
gi|425388417|ref|ZP_18771960.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1866]
gi|425395144|ref|ZP_18778235.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1868]
gi|425401199|ref|ZP_18783889.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1869]
gi|425407294|ref|ZP_18789499.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1870]
gi|425413652|ref|ZP_18795398.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE098]
gi|425419968|ref|ZP_18801223.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK523]
gi|425431264|ref|ZP_18811857.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1304]
gi|428949672|ref|ZP_19021928.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1467]
gi|428955744|ref|ZP_19027518.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1042]
gi|428961768|ref|ZP_19033029.1| ATP-dependent DNA helicase RecQ [Escherichia coli 89.0511]
gi|428968370|ref|ZP_19039058.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0091]
gi|428974146|ref|ZP_19044441.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0039]
gi|428980535|ref|ZP_19050328.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.2281]
gi|428986311|ref|ZP_19055684.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0055]
gi|428992459|ref|ZP_19061431.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0056]
gi|428998356|ref|ZP_19066931.1| ATP-dependent DNA helicase RecQ [Escherichia coli 94.0618]
gi|429004744|ref|ZP_19072788.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0183]
gi|429010783|ref|ZP_19078163.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.1288]
gi|429017247|ref|ZP_19084107.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0943]
gi|429023086|ref|ZP_19089586.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0428]
gi|429029170|ref|ZP_19095125.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0427]
gi|429035310|ref|ZP_19100818.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0939]
gi|429041420|ref|ZP_19106492.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0932]
gi|429047246|ref|ZP_19111942.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0107]
gi|429052597|ref|ZP_19117153.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0003]
gi|429058154|ref|ZP_19122396.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.1742]
gi|429063674|ref|ZP_19127630.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0007]
gi|429069876|ref|ZP_19133298.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0672]
gi|429075653|ref|ZP_19138895.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0678]
gi|429080853|ref|ZP_19143978.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0713]
gi|429829081|ref|ZP_19360059.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0109]
gi|429835546|ref|ZP_19365772.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0010]
gi|443619893|ref|YP_007383749.1| ATP-dependent DNA helicase RecQ [Escherichia coli APEC O78]
gi|444927567|ref|ZP_21246820.1| ATP-dependent DNA helicase RecQ [Escherichia coli 09BKT078844]
gi|444933176|ref|ZP_21252172.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0814]
gi|444938639|ref|ZP_21257361.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0815]
gi|444944245|ref|ZP_21262719.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0816]
gi|444949646|ref|ZP_21267927.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0839]
gi|444955383|ref|ZP_21273438.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0848]
gi|444960749|ref|ZP_21278560.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1753]
gi|444965954|ref|ZP_21283505.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1775]
gi|444972010|ref|ZP_21289338.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1793]
gi|444977298|ref|ZP_21294364.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1805]
gi|444982637|ref|ZP_21299533.1| ATP-dependent DNA helicase RecQ [Escherichia coli ATCC 700728]
gi|444988047|ref|ZP_21304814.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA11]
gi|444993429|ref|ZP_21310059.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA19]
gi|444998607|ref|ZP_21315096.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA13]
gi|445004152|ref|ZP_21320531.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA2]
gi|445009571|ref|ZP_21325789.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA47]
gi|445014650|ref|ZP_21330744.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA48]
gi|445020572|ref|ZP_21336526.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA8]
gi|445025933|ref|ZP_21341746.1| ATP-dependent DNA helicase RecQ [Escherichia coli 7.1982]
gi|445031388|ref|ZP_21347043.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1781]
gi|445036812|ref|ZP_21352329.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1762]
gi|445042490|ref|ZP_21357851.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA35]
gi|445047694|ref|ZP_21362931.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4880]
gi|445061301|ref|ZP_21373807.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0670]
gi|450226865|ref|ZP_21897539.1| ATP-dependent DNA helicase RecQ [Escherichia coli O08]
gi|450252923|ref|ZP_21902297.1| ATP-dependent DNA helicase RecQ [Escherichia coli S17]
gi|54041622|sp|P15043.5|RECQ_ECOLI RecName: Full=ATP-dependent DNA helicase RecQ
gi|48994977|gb|AAT48221.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
MG1655]
gi|73857811|gb|AAZ90518.1| ATP-dependent DNA helicase [Shigella sonnei Ss046]
gi|85676229|dbj|BAE77479.1| ATP-dependent DNA helicase [Escherichia coli str. K12 substr. W3110]
gi|157068978|gb|ABV08233.1| ATP-dependent DNA helicase RecQ [Escherichia coli HS]
gi|169891138|gb|ACB04845.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr. DH10B]
gi|187431186|gb|ACD10460.1| ATP-dependent DNA helicase RecQ [Shigella boydii CDC 3083-94]
gi|188490139|gb|EDU65242.1| ATP-dependent DNA helicase RecQ [Escherichia coli 53638]
gi|218354275|emb|CAV00962.1| ATP-dependent DNA helicase [Escherichia coli 55989]
gi|218371471|emb|CAR19306.1| ATP-dependent DNA helicase [Escherichia coli IAI39]
gi|222035520|emb|CAP78265.1| ATP-dependent DNA helicase recQ [Escherichia coli LF82]
gi|238860042|gb|ACR62040.1| ATP-dependent DNA helicase [Escherichia coli BW2952]
gi|254595220|gb|ACT74581.1| ATP-dependent DNA helicase [Escherichia coli O157:H7 str. TW14359]
gi|257756421|dbj|BAI27923.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str. 11368]
gi|284923930|emb|CBG37029.1| ATP-dependent DNA helicase [Escherichia coli 042]
gi|291321518|gb|EFE60956.1| ATP-dependent DNA helicase RecQ [Escherichia coli B088]
gi|294490610|gb|ADE89366.1| ATP-dependent DNA helicase RecQ [Escherichia coli IHE3034]
gi|307555948|gb|ADN48723.1| ATP-dependent DNA helicase RecQ [Escherichia coli ABU 83972]
gi|315618731|gb|EFU99316.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3431]
gi|323155231|gb|EFZ41415.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPECa14]
gi|323167577|gb|EFZ53283.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 53G]
gi|323173439|gb|EFZ59068.1| ATP-dependent DNA helicase RecQ [Escherichia coli LT-68]
gi|332084978|gb|EGI90160.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 155-74]
gi|332345801|gb|AEE59135.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNK88]
gi|332996969|gb|EGK16587.1| ATP-dependent DNA helicase RecQ [Shigella flexneri VA-6]
gi|335573445|gb|EGM59800.1| ATP-dependent DNA helicase RecQ [Shigella flexneri J1713]
gi|339417552|gb|AEJ59224.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNF18]
gi|340731834|gb|EGR60973.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
01-09591]
gi|340737771|gb|EGR72025.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
LB226692]
gi|342362570|gb|EGU26687.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH140A]
gi|344192682|gb|EGV46771.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH001]
gi|345333780|gb|EGW66227.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_B2F1]
gi|345357660|gb|EGW89852.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_EH250]
gi|345369561|gb|EGX01544.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_MHI813]
gi|345369710|gb|EGX01692.1| ATP-dependent DNA helicase RecQ [Escherichia coli G58-1]
gi|345384846|gb|EGX14704.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_S1191]
gi|345389797|gb|EGX19598.1| ATP-dependent DNA helicase RecQ [Escherichia coli TX1999]
gi|359333954|dbj|BAL40401.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr. MDS42]
gi|374361266|gb|AEZ42973.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
RM12579]
gi|377889383|gb|EHU53847.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3B]
gi|377900947|gb|EHU65271.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3A]
gi|377901914|gb|EHU66224.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3C]
gi|377903769|gb|EHU68059.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3D]
gi|377906294|gb|EHU70540.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3E]
gi|377916995|gb|EHU81064.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3F]
gi|377923006|gb|EHU86977.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4A]
gi|377926673|gb|EHU90603.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4B]
gi|377937309|gb|EHV01090.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4D]
gi|377937816|gb|EHV01589.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4C]
gi|377952265|gb|EHV15861.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4F]
gi|377957081|gb|EHV20618.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4E]
gi|377957368|gb|EHV20903.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5A]
gi|377960982|gb|EHV24457.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5B]
gi|377969378|gb|EHV32756.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5C]
gi|377970401|gb|EHV33763.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5D]
gi|377980238|gb|EHV43504.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5E]
gi|377988783|gb|EHV51958.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6B]
gi|377989115|gb|EHV52284.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6A]
gi|377992641|gb|EHV55787.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6C]
gi|378003621|gb|EHV66662.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6D]
gi|378006269|gb|EHV69255.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6E]
gi|378010076|gb|EHV73023.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7A]
gi|378020960|gb|EHV83688.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7C]
gi|378023963|gb|EHV86628.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7D]
gi|378028415|gb|EHV91033.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7B]
gi|378035128|gb|EHV97690.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7E]
gi|378048184|gb|EHW10539.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8C]
gi|378057740|gb|EHW19963.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8D]
gi|378068432|gb|EHW30533.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9A]
gi|378073450|gb|EHW35501.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9B]
gi|378078658|gb|EHW40639.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9C]
gi|378086522|gb|EHW48397.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9D]
gi|378088985|gb|EHW50834.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9E]
gi|378096895|gb|EHW58661.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10A]
gi|378102153|gb|EHW63835.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10B]
gi|378119748|gb|EHW81237.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10C]
gi|378121916|gb|EHW83364.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10D]
gi|378124653|gb|EHW86058.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11A]
gi|378125192|gb|EHW86594.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10F]
gi|378138180|gb|EHW99439.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11B]
gi|378144053|gb|EHX05229.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11D]
gi|378233768|gb|EHX93852.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15A]
gi|378239942|gb|EHX99919.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15B]
gi|378242825|gb|EHY02776.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15C]
gi|378250902|gb|EHY10804.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15D]
gi|378255628|gb|EHY15485.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15E]
gi|385154769|gb|EIF16778.1| ATP-dependent DNA helicase RecQ [Escherichia coli O32:H37 str. P4]
gi|388350582|gb|EIL15941.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9534]
gi|388370946|gb|EIL34439.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9545]
gi|388373611|gb|EIL36859.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9942]
gi|388380812|gb|EIL43394.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10026]
gi|390637133|gb|EIN16689.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1996]
gi|390637513|gb|EIN17059.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA505]
gi|390638307|gb|EIN17820.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA517]
gi|390655763|gb|EIN33679.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1985]
gi|390656665|gb|EIN34525.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93-001]
gi|390659431|gb|EIN37196.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1990]
gi|390673956|gb|EIN50168.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA3]
gi|390677280|gb|EIN53339.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA5]
gi|390680714|gb|EIN56541.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA9]
gi|390691815|gb|EIN66538.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA10]
gi|390696174|gb|EIN70668.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA14]
gi|390697410|gb|EIN71830.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA15]
gi|390711245|gb|EIN84228.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA22]
gi|390717538|gb|EIN90322.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA24]
gi|390718182|gb|EIN90940.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA25]
gi|390724300|gb|EIN96860.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA28]
gi|390736865|gb|EIO08185.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA31]
gi|390737487|gb|EIO08782.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA32]
gi|390741100|gb|EIO12195.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA33]
gi|390755766|gb|EIO25297.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA40]
gi|390758421|gb|EIO27875.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA39]
gi|390761852|gb|EIO31126.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA41]
gi|390764847|gb|EIO34042.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA42]
gi|390779055|gb|EIO46792.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW06591]
gi|390786025|gb|EIO53561.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07945]
gi|390796590|gb|EIO63861.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10246]
gi|390799973|gb|EIO67092.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09098]
gi|390803163|gb|EIO70187.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW11039]
gi|390804554|gb|EIO71520.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09109]
gi|390813588|gb|EIO80198.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10119]
gi|390821916|gb|EIO88072.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09195]
gi|390822385|gb|EIO88509.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4203]
gi|390827531|gb|EIO93291.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4196]
gi|390840654|gb|EIP04669.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14313]
gi|390842695|gb|EIP06532.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14301]
gi|390847735|gb|EIP11259.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4421]
gi|390858215|gb|EIP20623.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4422]
gi|390862503|gb|EIP24686.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4013]
gi|390866548|gb|EIP28505.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4402]
gi|390874830|gb|EIP35918.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4439]
gi|390880191|gb|EIP40894.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4436]
gi|390890079|gb|EIP49765.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4437]
gi|390891420|gb|EIP51051.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4448]
gi|390897852|gb|EIP57152.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1738]
gi|390905830|gb|EIP64755.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1734]
gi|390915489|gb|EIP74001.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1845]
gi|390915828|gb|EIP74328.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1863]
gi|391244920|gb|EIQ04196.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2850-71]
gi|391245159|gb|EIQ04433.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-1770]
gi|391265596|gb|EIQ24564.1| ATP-dependent DNA helicase RecQ [Shigella boydii 965-58]
gi|391277456|gb|EIQ36200.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3226-85]
gi|391280624|gb|EIQ39291.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3233-85]
gi|391291630|gb|EIQ50010.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 4822-66]
gi|391297979|gb|EIQ56004.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 225-75]
gi|394391248|gb|EJE68134.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10224]
gi|394402810|gb|EJE78500.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9553]
gi|394411617|gb|EJE85840.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10021]
gi|394423765|gb|EJE96980.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9455]
gi|394430839|gb|EJF03117.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10030]
gi|394431778|gb|EJF03941.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9952]
gi|397894923|gb|EJL11359.1| ATP-dependent DNA helicase RecQ [Shigella sonnei str. Moseley]
gi|406780153|gb|AFS59577.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056742|gb|AFS76793.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2011C-3493]
gi|407062864|gb|AFS83911.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408061419|gb|EKG95938.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA7]
gi|408063920|gb|EKG98407.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK920]
gi|408065096|gb|EKG99572.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA34]
gi|408075235|gb|EKH09473.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA506]
gi|408080230|gb|EKH14314.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA507]
gi|408088415|gb|EKH21787.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA504]
gi|408094586|gb|EKH27603.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1999]
gi|408100770|gb|EKH33252.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1997]
gi|408105693|gb|EKH37840.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE1487]
gi|408112433|gb|EKH44083.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE037]
gi|408118686|gb|EKH49805.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK2001]
gi|408125003|gb|EKH55643.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA4]
gi|408134793|gb|EKH64609.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA23]
gi|408136802|gb|EKH66532.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA49]
gi|408143753|gb|EKH73027.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA45]
gi|408152134|gb|EKH80583.1| ATP-dependent DNA helicase RecQ [Escherichia coli TT12B]
gi|408157176|gb|EKH85342.1| ATP-dependent DNA helicase RecQ [Escherichia coli MA6]
gi|408161220|gb|EKH89191.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5905]
gi|408170320|gb|EKH97532.1| ATP-dependent DNA helicase RecQ [Escherichia coli CB7326]
gi|408177268|gb|EKI04083.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC96038]
gi|408180273|gb|EKI06898.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5412]
gi|408189631|gb|EKI15342.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW15901]
gi|408197818|gb|EKI23069.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW00353]
gi|408208793|gb|EKI33413.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3006]
gi|408210666|gb|EKI35226.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA38]
gi|408223507|gb|EKI47276.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1735]
gi|408234880|gb|EKI57873.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1736]
gi|408237737|gb|EKI60587.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1737]
gi|408242911|gb|EKI65462.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1846]
gi|408251792|gb|EKI73509.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1847]
gi|408256146|gb|EKI77539.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1848]
gi|408262801|gb|EKI83715.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1849]
gi|408271059|gb|EKI91208.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1850]
gi|408274185|gb|EKI94210.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1856]
gi|408282088|gb|EKJ01436.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1862]
gi|408288474|gb|EKJ07297.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1864]
gi|408293101|gb|EKJ11565.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1865]
gi|408303336|gb|EKJ20798.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1868]
gi|408304519|gb|EKJ21944.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1866]
gi|408315855|gb|EKJ32154.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1869]
gi|408321307|gb|EKJ37346.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1870]
gi|408323034|gb|EKJ39003.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE098]
gi|408334009|gb|EKJ48917.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK523]
gi|408341948|gb|EKJ56384.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1304]
gi|408544804|gb|EKK22250.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.2239]
gi|408545335|gb|EKK22771.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4870]
gi|408545856|gb|EKK23279.1| ATP-dependent DNA helicase RecQ [Escherichia coli 6.0172]
gi|408563231|gb|EKK39371.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0566]
gi|408563445|gb|EKK39578.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0586]
gi|408564373|gb|EKK40483.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0569]
gi|408575663|gb|EKK51316.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0833]
gi|408578574|gb|EKK54091.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.2524]
gi|408588317|gb|EKK62900.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0869]
gi|408593310|gb|EKK67634.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.0221]
gi|408599002|gb|EKK72934.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0416]
gi|408608686|gb|EKK82072.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0821]
gi|421948409|gb|EKU05429.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949627|gb|EKU06557.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427201317|gb|EKV71710.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1042]
gi|427201385|gb|EKV71774.1| ATP-dependent DNA helicase RecQ [Escherichia coli 89.0511]
gi|427204734|gb|EKV75006.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1467]
gi|427217586|gb|EKV86644.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0091]
gi|427221262|gb|EKV90123.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.2281]
gi|427224265|gb|EKV92982.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0039]
gi|427237737|gb|EKW05261.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0056]
gi|427238116|gb|EKW05636.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0055]
gi|427242488|gb|EKW09895.1| ATP-dependent DNA helicase RecQ [Escherichia coli 94.0618]
gi|427255805|gb|EKW22046.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0183]
gi|427257425|gb|EKW23551.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0943]
gi|427257996|gb|EKW24110.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.1288]
gi|427273047|gb|EKW37747.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0428]
gi|427274751|gb|EKW39394.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0427]
gi|427280527|gb|EKW44885.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0939]
gi|427289002|gb|EKW52599.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0932]
gi|427295793|gb|EKW58875.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0107]
gi|427297634|gb|EKW60664.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0003]
gi|427307738|gb|EKW70166.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.1742]
gi|427310706|gb|EKW72942.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0007]
gi|427315500|gb|EKW77496.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0672]
gi|427324990|gb|EKW86445.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0678]
gi|427326402|gb|EKW87820.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0713]
gi|429250725|gb|EKY35374.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0109]
gi|429251161|gb|EKY35784.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0010]
gi|443424401|gb|AGC89305.1| ATP-dependent DNA helicase RecQ [Escherichia coli APEC O78]
gi|444534888|gb|ELV15066.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0814]
gi|444536334|gb|ELV16361.1| ATP-dependent DNA helicase RecQ [Escherichia coli 09BKT078844]
gi|444545204|gb|ELV24138.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0815]
gi|444554349|gb|ELV31919.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0816]
gi|444554556|gb|ELV32113.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0839]
gi|444559217|gb|ELV36456.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0848]
gi|444568882|gb|ELV45531.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1753]
gi|444572276|gb|ELV48715.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1775]
gi|444575846|gb|ELV52071.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1793]
gi|444587827|gb|ELV63229.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1805]
gi|444589282|gb|ELV64624.1| ATP-dependent DNA helicase RecQ [Escherichia coli ATCC 700728]
gi|444589460|gb|ELV64795.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA11]
gi|444603190|gb|ELV77901.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA19]
gi|444603275|gb|ELV77985.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA13]
gi|444612464|gb|ELV86757.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA2]
gi|444618782|gb|ELV92849.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA47]
gi|444620257|gb|ELV94266.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA48]
gi|444626765|gb|ELW00555.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA8]
gi|444635256|gb|ELW08688.1| ATP-dependent DNA helicase RecQ [Escherichia coli 7.1982]
gi|444637104|gb|ELW10480.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1781]
gi|444642183|gb|ELW15387.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1762]
gi|444651734|gb|ELW24530.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA35]
gi|444657008|gb|ELW29510.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4880]
gi|444666687|gb|ELW38747.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0670]
gi|449313574|gb|EMD03779.1| ATP-dependent DNA helicase RecQ [Escherichia coli O08]
gi|449314202|gb|EMD04376.1| ATP-dependent DNA helicase RecQ [Escherichia coli S17]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|386399772|ref|ZP_10084550.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. WSM1253]
gi|385740398|gb|EIG60594.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. WSM1253]
Length = 623
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 227/655 (34%), Positives = 340/655 (51%), Gaps = 76/655 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG FR Q EII G + VLMPTGGGKSL YQLPAL+ G +V+SPL++L
Sbjct: 25 RSVFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSLCYQLPALLREGCGVVVSPLIAL 84
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ +L+A + A L+ ++ E +I R L + LLYV PE++ L
Sbjct: 85 MRDQVAAMLEAGVNAAALNSSLTPQEASDIERRLIAG--DLDLLYVAPERLLTPRCL--- 139
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+L AR +A IDEAHCVSQWGHDFRP+Y GL ++ ++FP+ P +ALTATA ++
Sbjct: 140 --ALLARAKVALFAIDEAHCVSQWGHDFRPEYVGLSVIAERFPDVPRIALTATADELTRK 197
Query: 566 DVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLSYGHFFLLKEFYVVSL--- 619
++V+ L L + F SF+RPN+ +D +L+ + H Y +S
Sbjct: 198 EIVERLHLADSPHFVSSFDRPNIRYEIVDKRNAVSQLKDFIRERHAGDAGVVYCLSRKRV 257
Query: 620 --------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ G A YH +D + R+ Q ++ ++ +I AT+AFGMGI+KPDVRFV
Sbjct: 258 EEVAAALDDAGIAALPYHAGLDSSVRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVA 317
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H LPKSIE Y+QE GRAGRDG+ S+ + Y SD ++ + MI + + G + F
Sbjct: 318 HLDLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDE--------SSGSDEF 369
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
+ G+ L +V E CRR L +FGE C CDNC
Sbjct: 370 KRVSIGK--------LDALVGLAETP-HCRRRRLLAYFGEIVMGEGC-GNCDNCLMPPKM 419
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+D A+KL+ TGQ+F + H+++V G L + V + H+ L++ G G+ L +
Sbjct: 420 --RDGKVLAQKLLSCAYRTGQRFGAMHLIDVLIGRLTEKVTQFGHDKLTVFGIGRELNEK 477
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLR--FPSA-I 908
+ +LR LV L+ + S+ +G+ LK+ S + ++ G V LR P A I
Sbjct: 478 QWRTVLRQLVAMGHLLSD---SEAFGA----LKLTDS-SRGVLRGETEVWLREEAPGARI 529
Query: 909 NST--KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
S+ K + D+ PA G+ Q +VD L A+ LR R+ + +
Sbjct: 530 RSSRAKSRRGDLAPAAGA----------------AQGDVDPELRAR----LRAWRSEIAR 569
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
GV AY + +AT+ + + P T +EL + GIG K+ YG LL+ + +
Sbjct: 570 --ARGVPAYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVRT 622
>gi|409992245|ref|ZP_11275447.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis str. Paraca]
gi|409936909|gb|EKN78371.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis str. Paraca]
Length = 739
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 222/656 (33%), Positives = 345/656 (52%), Gaps = 80/656 (12%)
Query: 379 KKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLV 438
+ L+ K+ FG SFRP QREII + DV +MPTGGGKSL +QLPAL+ PG+T+V
Sbjct: 12 QSLQQCLKQYFGYDSFRPGQREIIEQVLQKRDVLAIMPTGGGKSLCFQLPALLKPGLTVV 71
Query: 439 ISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAK 498
+SPL++L+QDQ+ L I ATFL+ ++ + ++ RE K KLLYV PE++
Sbjct: 72 VSPLIALMQDQVEALKNNGIEATFLNSTVDLNQARQ--REFAILQGKIKLLYVAPERLL- 128
Query: 499 SDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTAT 558
S L L+ ++A ++ +VIDEAHCVS WGHDFRP+Y+ + ++ ++P+ P +ALTAT
Sbjct: 129 SPQFLGFLDRIDAELGISTLVIDEAHCVSDWGHDFRPEYRQIQQVRSRYPHVPAIALTAT 188
Query: 559 ATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC------EKVAERLQVGLSYGHFFLL- 611
AT V+ D+++ + L + SF R NL+ ++ + L+ S ++
Sbjct: 189 ATERVRFDIIRQIVLKQPYVHVASFYRSNLYYQVIPKQPKKRFTQLLKAIESMSGSGIIY 248
Query: 612 ----KEFYVVSLECGHK---AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
K V+L+ H A YH + + R ++ +D++ II AT+AFGMGI+K
Sbjct: 249 CSSRKRVEEVALQLQHNNIPALPYHAGMADSDRLESHTRFIRDDVRIIVATIAFGMGIDK 308
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
PDVRFVIH+ LPKS+E Y+QE GRAGRDGQ + C+L++SY D ++++I Q
Sbjct: 309 PDVRFVIHYDLPKSLENYYQESGRAGRDGQPAQCLLFFSYGDMKTIEYLIEQ-------- 360
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
P + +A + L +++ Y E+ +CR +QL +FGE+F +C CDN
Sbjct: 361 KPDVDEQRIAR---------QQLRQVIDYAES-TECRHRIQLRYFGEEF-PGNC-DGCDN 408
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C + +D T A K + V ++F S+I++V RGS NQ V H+ LS +
Sbjct: 409 CCHERPI--EDWTLEAMKFLSCVARCRERFGMSYIIDVLRGSKNQRVLSRGHDKLSTYNI 466
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ E + R L+ + L + +D Y S+LK+N ++ RQ V
Sbjct: 467 GRDRTVDEWKMLARSLLHQGLLDQ---TNDGY----SILKLNNLSWE--VMKRQREV--- 514
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAK-LYSSLRMLRTL 963
K++ R+ PQ + K L LR +R
Sbjct: 515 ------------------------KIAVVRDR--QLPQQTWSMAADVKMLLEHLRQVRKQ 548
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + + Y IF ++TL +++ P+T+E LL ++G+ K YG + L I
Sbjct: 549 IADQ--NDIAPYKIFSDSTLGLMARERPQTKEALLRLSGVTTYKAQSYGQQFLNAI 602
>gi|284034978|ref|YP_003384908.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
gi|283814271|gb|ADB36109.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
Length = 707
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 338/652 (51%), Gaps = 79/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ +G FRP Q II + +SG D VLMPTGGGKS+ +Q+PAL+ PG+T+V+SPL++L
Sbjct: 16 KRYYGYDRFRPMQEAIIQSILSGRDTVVLMPTGGGKSVCFQIPALMLPGLTVVVSPLIAL 75
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A F + EQ+EI + S K KLLYV+PEK+ Q
Sbjct: 76 MKDQVGALHMNGIQAAFYNSTQTSREQREIENDCISG--KLKLLYVSPEKLLTESFF--Q 131
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
SL L A IDEAHC+S WGHDFRP+Y L +LK++FP P +ALTATA ++
Sbjct: 132 FLSLTNLSLFA---IDEAHCISSWGHDFRPEYTQLHVLKEQFPTVPTIALTATADKLTRQ 188
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGL--------SYGHFFLLKEFYVV 617
D+ LG+ + IF SFNR NL + R+Q + + G + L
Sbjct: 189 DIATRLGMNDPAIFVDSFNRKNLSLQVLPGQNRIQQIIRLLQQKPDTSGIIYCLSRKSTE 248
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL E G AAFYH +DP R+ Q+ + +D++ IICAT+AFGMGI+K +VR+VIH
Sbjct: 249 SLAAKLQEKGFSAAFYHAKMDPDDRSKTQEAFLRDDVRIICATIAFGMGIDKSNVRWVIH 308
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+++PK+IE ++QE GRAGRDG + VL+YS++D K M+ AE +P
Sbjct: 309 YNMPKNIESFYQEIGRAGRDGAAAQTVLFYSFADVATYKDML----AENNP--------- 355
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
AN G L L RM Y + CRR + L +F E+ C CD C + +
Sbjct: 356 -ANLGLQL----AKLERMQQYADAHT-CRRQILLSYFSEELPDP-C-GNCDVCRDPR--V 405
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K + + TG++ + ++++ RGS +Q V + ++ + +GAG+ + +
Sbjct: 406 TFDGTVLAQKALSAIIRTGERVPMNLLIDILRGSRSQQVLQGGYDQIKTYGAGRDIRFED 465
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+ L+ + + E+ Y +L L GR+
Sbjct: 466 WRSYIHQLI--NIGVIEIAYEQHYALRRGIL-----ADQVLYKGRK------------ID 506
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
L + D P P T ++ + + D L+ LR+LR L E + V
Sbjct: 507 LVRPDDAP----------KPVVEKTRAKTETQRD-----DLFERLRVLRKQLADE--QNV 549
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIK 1024
AY IF + TL+ ++++ P + L ++G+G+ K+ +G R LE I ++
Sbjct: 550 PAYVIFTDTTLEDMARQRPTAPDALRNVSGVGERKLQLFGKRFLEEIVGHVR 601
>gi|191166095|ref|ZP_03027930.1| ATP-dependent DNA helicase RecQ [Escherichia coli B7A]
gi|209921301|ref|YP_002295385.1| ATP-dependent DNA helicase RecQ [Escherichia coli SE11]
gi|300823362|ref|ZP_07103493.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 119-7]
gi|307313604|ref|ZP_07593224.1| ATP-dependent DNA helicase RecQ [Escherichia coli W]
gi|309796230|ref|ZP_07690640.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 145-7]
gi|331670669|ref|ZP_08371506.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA271]
gi|331679934|ref|ZP_08380597.1| ATP-dependent DNA helicase RecQ [Escherichia coli H591]
gi|378715260|ref|YP_005280153.1| ATP-dependent DNA helicase RecQ [Escherichia coli KO11FL]
gi|386611198|ref|YP_006126684.1| ATP-dependent DNA helicase [Escherichia coli W]
gi|386699326|ref|YP_006163163.1| ATP-dependent DNA helicase RecQ [Escherichia coli KO11FL]
gi|386711730|ref|YP_006175451.1| ATP-dependent DNA helicase RecQ [Escherichia coli W]
gi|416345829|ref|ZP_11679244.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4100B]
gi|417221737|ref|ZP_12025177.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.154]
gi|417241736|ref|ZP_12037493.1| ATP-dependent DNA helicase RecQ [Escherichia coli 9.0111]
gi|417269798|ref|ZP_12057158.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.3884]
gi|419947661|ref|ZP_14463980.1| ATP-dependent DNA helicase RecQ [Escherichia coli CUMT8]
gi|422778553|ref|ZP_16832201.1| ATP-dependent DNA helicase RecQ [Escherichia coli H120]
gi|423708132|ref|ZP_17682512.1| ATP-dependent DNA helicase recQ [Escherichia coli B799]
gi|432379058|ref|ZP_19622038.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE12]
gi|432762684|ref|ZP_19997145.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE48]
gi|432811570|ref|ZP_20045425.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE101]
gi|432829440|ref|ZP_20063054.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE135]
gi|432836825|ref|ZP_20070344.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE136]
gi|432965586|ref|ZP_20154507.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE203]
gi|433094218|ref|ZP_20280465.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE138]
gi|190903871|gb|EDV63585.1| ATP-dependent DNA helicase RecQ [Escherichia coli B7A]
gi|209914560|dbj|BAG79634.1| DNA helicase RecQ [Escherichia coli SE11]
gi|300524148|gb|EFK45217.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 119-7]
gi|306906585|gb|EFN37097.1| ATP-dependent DNA helicase RecQ [Escherichia coli W]
gi|308120112|gb|EFO57374.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 145-7]
gi|315063115|gb|ADT77442.1| ATP-dependent DNA helicase [Escherichia coli W]
gi|320198470|gb|EFW73071.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4100B]
gi|323380821|gb|ADX53089.1| ATP-dependent DNA helicase RecQ [Escherichia coli KO11FL]
gi|323943861|gb|EGB39955.1| ATP-dependent DNA helicase RecQ [Escherichia coli H120]
gi|331062142|gb|EGI34064.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA271]
gi|331072481|gb|EGI43813.1| ATP-dependent DNA helicase RecQ [Escherichia coli H591]
gi|383390853|gb|AFH15811.1| ATP-dependent DNA helicase RecQ [Escherichia coli KO11FL]
gi|383407422|gb|AFH13665.1| ATP-dependent DNA helicase RecQ [Escherichia coli W]
gi|385709045|gb|EIG46047.1| ATP-dependent DNA helicase recQ [Escherichia coli B799]
gi|386201539|gb|EII00530.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.154]
gi|386211853|gb|EII22304.1| ATP-dependent DNA helicase RecQ [Escherichia coli 9.0111]
gi|386228603|gb|EII55959.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.3884]
gi|388422564|gb|EIL82138.1| ATP-dependent DNA helicase RecQ [Escherichia coli CUMT8]
gi|430895567|gb|ELC17829.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE12]
gi|431315306|gb|ELG03229.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE48]
gi|431359645|gb|ELG46278.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE101]
gi|431381178|gb|ELG65810.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE136]
gi|431382069|gb|ELG66414.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE135]
gi|431476162|gb|ELH55956.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE203]
gi|431606692|gb|ELI76066.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE138]
Length = 611
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|148221|gb|AAA67618.1| DNA-dependent ATPase, DNA helicase [Escherichia coli str. K-12
substr. MG1655]
Length = 610
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 346/661 (52%), Gaps = 85/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E +L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAAALQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEAARPVL--------- 504
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
A +S +L+ + K P Q N KL++ LR LR
Sbjct: 505 ----AESSLQLAVPRIVALK---------------PKAMQKSFGGNYDRKLFAKLRKLRK 545
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 546 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 603
Query: 1023 I 1023
+
Sbjct: 604 V 604
>gi|418513709|ref|ZP_13079934.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366081267|gb|EHN45216.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 615
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QVRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENMPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
>gi|437817959|ref|ZP_20842843.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435308090|gb|ELO83099.1| ATP-dependent DNA helicase RecQ [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQCDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 459 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 508
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 509 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|386332140|ref|YP_006028309.1| atp-dependent dna helicase protein [Ralstonia solanacearum Po82]
gi|334194588|gb|AEG67773.1| atp-dependent dna helicase protein [Ralstonia solanacearum Po82]
Length = 648
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 227/660 (34%), Positives = 339/660 (51%), Gaps = 86/660 (13%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLV 443
VFG +FR Q +I+ G D VLMPTGGGKSL YQ+PAL+ G +V+SPL+
Sbjct: 40 VFGYSAFRGPQADIVTHVADGGDCLVLMPTGGGKSLCYQIPALVRHRRGQGAGIVVSPLI 99
Query: 444 SLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
+L+QDQ+ L +A + A +L+ + TE ++ R+L + + L+YV PE++
Sbjct: 100 ALMQDQVAALEEAGVRAAYLNSALTGTEAAQVERDLAAG--RLDLVYVAPERLMTP---- 153
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
R LE L R + IDEAHCVSQWGHDFRP+Y L +L ++FP+ P +ALTATA A
Sbjct: 154 RFLELLE-RSRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPHVPRIALTATADAVT 212
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV------------GLSYGHFFL 610
++++V+ L L +F SF+RPN+ + EK + R Q+ G G +
Sbjct: 213 RDEIVERLALGGERVFLSSFDRPNIRYTIVEKDSARQQLLRFIRAEHLGEDGCDAGIVYC 272
Query: 611 LKEFYVVS-----LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKP 665
L V E G +A YH +D RA Q + K+E ++ AT+AFGMGI+KP
Sbjct: 273 LSRKKVEETAQWLAEQGIRALPYHAGMDVETRARHQAIFRKEEGVVMVATIAFGMGIDKP 332
Query: 666 DVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFT 725
DVRFV H LPKS+EGY+QE GRAGRDG ++ + Y +D ++ + MI + A+
Sbjct: 333 DVRFVAHLDLPKSLEGYYQETGRAGRDGLPANAWMAYGLADVVQQRRMIDESDADDV--- 389
Query: 726 PGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNC 785
H R +T L ++ CE+ CRR+ L +FGE + C NC
Sbjct: 390 --HKR-----------VSTAKLDALLGLCES-AGCRRVALLAYFGES------SQPCGNC 429
Query: 786 SKIKSFIEK-DVTDTAKKLVELVKLTGQ----QFSSSHILEVFRGSLNQYVKKHRHETLS 840
S + D T A+ + V Q F + ++++ RG+ + VK+ HETLS
Sbjct: 430 DTCLSPPQTWDATREAQMALSCVYRVQQASRVSFGAGQLIDILRGNATERVKQWHHETLS 489
Query: 841 LHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNV 900
G G L+++ + R LV + L D G + VL A ++ G +V
Sbjct: 490 TFGVGDTLSEAAWRGVFRQLVAQGLL-----AVDHGGHGALVLT---DAARPVLKGEHSV 541
Query: 901 VLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKL-YSSLRM 959
LR + K PA G+ + P+ DL++ A++ + +LR+
Sbjct: 542 TLR-------RQAEKVRAAPASGAKAERRADPA-----------ADLSVEAQMRWQALRV 583
Query: 960 LRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
R +E V AY IF ++TL H+++ P + E L E+ GIG AK+ +YG LL+ +
Sbjct: 584 WRAQTARE--HSVPAYVIFHDSTLAHIAESDPASREALAELPGIGVAKLDRYGQALLDVL 641
>gi|296105298|ref|YP_003615444.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059757|gb|ADF64495.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 630
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 215/651 (33%), Positives = 338/651 (51%), Gaps = 80/651 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL+
Sbjct: 40 ETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLM 99
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ LL + A L+ +QQE++ + + +LLY+ PE++ D L L
Sbjct: 100 KDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTG--QVRLLYIAPERLM-LDNFLDHL 156
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + + D
Sbjct: 157 AHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRLD 212
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEF 614
+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 213 IVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVED 272
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 273 TAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 332
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 333 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP---------- 377
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSFI 792
G++ + L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 378 --QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPPK 429
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 430 QYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEH 489
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
I+R L+ F + + + S L++ ++ L R +V L K
Sbjct: 490 WVSIIRQLIHLGFATQNIAQ-------HSALQLTEAARPVL---RGDVEL---------K 530
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
L+ V K P Q N KL++ LR LR + E E +
Sbjct: 531 LAVPRVVALK---------------PRVMQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 573
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L +NG+G K+ ++G + I S +
Sbjct: 574 PPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIRSHV 624
>gi|366163905|ref|ZP_09463660.1| ATP-dependent DNA helicase RecQ [Acetivibrio cellulolyticus CD2]
Length = 701
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 219/682 (32%), Positives = 351/682 (51%), Gaps = 60/682 (8%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG SFR Q +II + M+G D +MPTGGGKSL YQ+PAL+ G T+VISPL+SL
Sbjct: 9 RRYFGYSSFRQGQEKIIESIMNGFDSLGIMPTGGGKSLCYQIPALLMDGTTIVISPLISL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I + F++ ++EW E + LR ++KLLYV PE++ +S+ +
Sbjct: 69 MKDQVEALNNLGISSAFINSSLEWRELEHQLRLARKG--EFKLLYVAPERL-ESERFINM 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVL-ALTATATASVK 564
LES+ ++ + IDEAHCVSQWGHDFRP Y L ++ PN PV+ A TATAT VK
Sbjct: 126 LESIT----VSMVAIDEAHCVSQWGHDFRPSYLKLAQFLKQLPNRPVVTAFTATATERVK 181
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFL-----L 611
+D+++ L L +F F+R NL+ K A +L + Y G + +
Sbjct: 182 QDIIKLLELKTPKVFVTGFDRSNLFFSVRKGANKLDYVVKYLESHNNEAGIIYAATRKEV 241
Query: 612 KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
Y V G YH + +R Q ++ D I +I AT AFGMGI+K +VRFVI
Sbjct: 242 DRLYEVLHRRGIPVGKYHAGMTDEERNRNQDDFTYDRIRVIVATNAFGMGIDKSNVRFVI 301
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H ++PK++E Y+QE GRAGRDG + CVL Y D I + + + S P R
Sbjct: 302 HFNMPKNMESYYQEVGRAGRDGDEAECVLLYGAQD-----THIQRFLLDDSQLPPERKRH 356
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
A L MV YC + C R L +FGE S +C K C++C +
Sbjct: 357 EYA-----------KLQMMVDYC-HTTKCLRKYILEYFGETVASDNCGK-CESCISDSNL 403
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
DVT A+K+ +K G+Q+ + + V +GS + +++ + + LS +G +
Sbjct: 404 --SDVTLEAQKIFSCIKRMGEQYGAQLVSSVLKGSNLKKIRQLKFDKLSTYGIMREYTVE 461
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
+ ++ L + +L V V+K+NQ KA++++ G + V L+ +
Sbjct: 462 MLTDMMNRLAADGYLF-------VTKGQYPVVKLNQ-KAYDVLQGNEKVFLKVDGIQKTL 513
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDT----PSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
++K++ + P T + +++ + +L+ LR LR +L ++
Sbjct: 514 SVAKNEGFEVVDKDEKYEKYPQAEKTLRGEKAAKTEKIEEKIDQELFDKLRNLRRMLAEK 573
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFY 1027
+ + Y IF + TL+ + + +P+ + +L+I+G+G+ K YG +E I+ I E
Sbjct: 574 --QNLPPYIIFHDTTLKEMCRHLPQDRDTMLDISGVGETKFDMYGEIFIEAIQKYIAE-- 629
Query: 1028 KTDKNGSSSNDSNDSGKRRRDE 1049
+N S+S D +++ E
Sbjct: 630 ---RNYSNSTDVEVENQKKMHE 648
>gi|404377215|ref|ZP_10982353.1| ATP-dependent DNA helicase recQ [Escherichia sp. 1_1_43]
gi|422769226|ref|ZP_16822947.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1520]
gi|226838725|gb|EEH70753.1| ATP-dependent DNA helicase recQ [Escherichia sp. 1_1_43]
gi|323934125|gb|EGB30560.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1520]
Length = 611
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKPGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|429112524|ref|ZP_19174294.1| ATP-dependent DNA helicase RecQ [Cronobacter malonaticus 507]
gi|426313681|emb|CCK00407.1| ATP-dependent DNA helicase RecQ [Cronobacter malonaticus 507]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 210/651 (32%), Positives = 343/651 (52%), Gaps = 78/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+A + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTIVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ + + +LLY+ PE++ + +
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRTG--QVRLLYIAPERLMMDNFI--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++L +L A + +DEAHC+SQWGHDFRP+Y LG L+ +FP P +ALTATA + +
Sbjct: 133 -DTLGYWDL-AMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFVALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE----EKAP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A C CD C +
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPR 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ ++
Sbjct: 409 RYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++R L+ + + + + S L++ ++ A + G ++L P + + K
Sbjct: 469 WVSVIRQLIHLGVVTQNIAQ-------HSALQLTEA-ARPFLRGEAPLMLAVPR-VAALK 519
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 520 -------------------------PRVAQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L ING+G K+ ++G + I +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIREHV 603
>gi|334126137|ref|ZP_08500116.1| ATP-dependent helicase RecQ [Enterobacter hormaechei ATCC 49162]
gi|333385797|gb|EGK57023.1| ATP-dependent helicase RecQ [Enterobacter hormaechei ATCC 49162]
Length = 630
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 334/648 (51%), Gaps = 78/648 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL+
Sbjct: 40 ETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLM 99
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ LL + A L+ +QQE++ + + +LLY+ PE++ D L L
Sbjct: 100 KDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTG--QIRLLYIAPERLM-LDNFLDHL 156
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + + D
Sbjct: 157 AHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRLD 212
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEF 614
+V+ LGL + I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 213 IVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVED 272
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 273 TAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 332
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 333 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP---------- 377
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIE 793
G++ + L M ++ E CRRL+ L +FGE A C CD C + +
Sbjct: 378 --QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPKQ 430
Query: 794 KDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEA 853
D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 431 YDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHW 490
Query: 854 SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKL 913
I+R L+ F + + + S L++ ++ A ++ G + L P +
Sbjct: 491 VSIIRQLIHLGFATQNIAQ-------HSALQLTEA-ARPVLRGEVELKLAVPRVVAL--- 539
Query: 914 SKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVM 973
P Q N KL++ LR LR + E E +
Sbjct: 540 -----------------------KPRVMQKSYGGNYDRKLFAKLRKLRKAIADE--ENIP 574
Query: 974 AYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
Y +F +ATL +++++P + E+L +NG+G K+ ++G + I S
Sbjct: 575 PYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIRS 622
>gi|71282216|ref|YP_266851.1| ATP-dependent DNA helicase RecQ [Colwellia psychrerythraea 34H]
gi|71147956|gb|AAZ28429.1| ATP-dependent DNA helicase RecQ [Colwellia psychrerythraea 34H]
Length = 615
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 226/649 (34%), Positives = 330/649 (50%), Gaps = 81/649 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG SFR Q +IIN+ + G D VLMPTGGGKSL YQLPA++ PG+T+V+SPL++L
Sbjct: 31 KHYFGYESFREGQAKIINSLLQGQDSLVLMPTGGGKSLCYQLPAVLLPGVTVVVSPLIAL 90
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + I A F++ ++E +E +I L + KLLYV PE++ L
Sbjct: 91 MKDQVDGLTRQGISAAFINSSLEQSEISDIFARLGRG--EIKLLYVAPERLTNYYFL--- 145
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+SLN L + IDEAHC+SQWGHDFRP Y L LKQ FP PV+ALTATA + ++
Sbjct: 146 -QSLNQLPL-SLFAIDEAHCISQWGHDFRPAYTKLQCLKQNFPTVPVMALTATADVTTRK 203
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D++ L L N I SF+RPN+ + L Y G + + V
Sbjct: 204 DILNQLALPNPYIHLDSFDRPNIRFTLAPKYNGEKQLLGYIKKKGEDSGIIYCNSRWQVE 263
Query: 618 SLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G A YH ++ R+ VQ+ ++KD I I+ ATVAFG+GINKP+VR+VIH
Sbjct: 264 KLAKYLAASGINCAAYHAGLENEIRSLVQEGFTKDNIQIVIATVAFGLGINKPNVRYVIH 323
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
P+++E Y+QE GRAGRDG + + D R+K IS+G Q R N
Sbjct: 324 FEPPRTLESYYQEIGRAGRDGLNAEALFLVDDKDVARIKKRISEGDNPQ--------RVN 375
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
V + M ++ + CRR + L +F E + +K C NC +
Sbjct: 376 V---------EMQRFAAMDAFIDAQT-CRRQVVLNYFAE-----YTEKGCGNCDICLDPP 420
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D T A+K++ V QQ +H++ V RG L + VK+ H+ +S G GK
Sbjct: 421 SQFDGTIEAQKVLSCVYRVEQQGDINHVIAVLRGELTEKVKQLAHDKVSTFGIGKGKTVG 480
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
I+ L+ +L +++++ S+L + Q A +++ Q P + S
Sbjct: 481 YWFSIIGQLIHLGYLQQDIEQ-------QSILCLTQ--ASGVVLKAQE-----PLMLASP 526
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
+L K+ K PQ D L AK LR LR + GE
Sbjct: 527 RLQKASYWQEKS-----------------PQKSYDRVLFAK----LRELRKAIAD--GED 563
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
+ + +F +ATL L++ P+T E+L I+GIG K+S+YG L I+
Sbjct: 564 IAPFIVFNDATLSELARIKPKTSREMLSISGIGDVKLSRYGQPFLALIK 612
>gi|429102817|ref|ZP_19164791.1| ATP-dependent DNA helicase RecQ [Cronobacter turicensis 564]
gi|426289466|emb|CCJ90904.1| ATP-dependent DNA helicase RecQ [Cronobacter turicensis 564]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 210/651 (32%), Positives = 343/651 (52%), Gaps = 78/651 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+A + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIPALVKTGLTIVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ EQQ ++ + + +LLY+ PE++ + +
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSRDEQQAVMAGCRTG--EVRLLYIAPERLMMDNFI--- 132
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++L +L A + +DEAHC+SQWGHDFRP+Y LG L+ +FP P +ALTATA + +
Sbjct: 133 -DTLGYWDL-AMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFIALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E++P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE----EKAP--------- 357
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
G + + L M ++ E CRRL+ L +FGE A C CD C +
Sbjct: 358 ----GPLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEG-RQAPC-GNCDIC--LDPPR 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ ++
Sbjct: 409 RYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
++R L+ + + + + S L++ ++ A + G ++L P + + K
Sbjct: 469 WVSVIRQLIHLGVVTQNIAQ-------HSALQLTEA-ARPFLRGEAPLMLAVPR-VAALK 519
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 520 -------------------------PRVAQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L ING+G K+ ++G + I +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIREHV 603
>gi|147559|gb|AAA24517.1| recQ [Escherichia coli]
Length = 610
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 346/661 (52%), Gaps = 85/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E +L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAAALQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEAARPVL--------- 504
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
A +S +L+ + K P Q N KL++ LR LR
Sbjct: 505 ----AESSLQLAVPRIVALK---------------PKAMQKSFGGNYDRKLFAKLRKLRK 545
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 546 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIPAH 603
Query: 1023 I 1023
+
Sbjct: 604 V 604
>gi|375258339|ref|YP_005017509.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca KCTC 1686]
gi|402839822|ref|ZP_10888300.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. OBRC7]
gi|423105828|ref|ZP_17093529.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5242]
gi|365907817|gb|AEX03270.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca KCTC 1686]
gi|376379689|gb|EHS92440.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5242]
gi|402287439|gb|EJU35887.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. OBRC7]
Length = 608
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 209/654 (31%), Positives = 336/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+ ++G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QIRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N L+ + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LTHWN----LSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLDLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGDVTLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQTPLTAGEMLSVNGVGTRKLERFGKEFMALIRAHV 603
>gi|110807486|ref|YP_691006.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 5 str. 8401]
gi|415859116|ref|ZP_11533441.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 2457T]
gi|417704375|ref|ZP_12353472.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-218]
gi|417725388|ref|ZP_12374173.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-304]
gi|417730594|ref|ZP_12379278.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-671]
gi|417735693|ref|ZP_12384331.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2747-71]
gi|417740471|ref|ZP_12389038.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 4343-70]
gi|417745522|ref|ZP_12394040.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2930-71]
gi|420344000|ref|ZP_14845461.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-404]
gi|424839868|ref|ZP_18264505.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 5a str. M90T]
gi|110617034|gb|ABF05701.1| ATP-dependent DNA helicase [Shigella flexneri 5 str. 8401]
gi|313647133|gb|EFS11588.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 2457T]
gi|332750946|gb|EGJ81351.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 4343-70]
gi|332751036|gb|EGJ81440.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-671]
gi|332752274|gb|EGJ82665.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2747-71]
gi|332764332|gb|EGJ94567.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2930-71]
gi|332998187|gb|EGK17790.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-218]
gi|333013511|gb|EGK32880.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-304]
gi|383468920|gb|EID63941.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 5a str. M90T]
gi|391262699|gb|EIQ21714.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-404]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|343083870|ref|YP_004773165.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342352404|gb|AEL24934.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 709
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 229/657 (34%), Positives = 340/657 (51%), Gaps = 90/657 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK +G SFR Q +I + D LMPTG GKS+ YQ+PA++ PG+TLVISPL++L
Sbjct: 8 KKFYGYDSFRGQQESVIRQVIEKKDCIALMPTGAGKSVCYQVPAMVLPGLTLVISPLIAL 67
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKV-AKSDV 501
++DQ+ L + IPA FL+ M+ +EQ+ + SD KLLYV PE++ + +
Sbjct: 68 MKDQVDALNEIGIPAAFLNSTMDISEQRYV-----SDQAMKGGIKLLYVAPERLFSGTHP 122
Query: 502 LLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATA 561
L+ L+ +N L+ + +DEAHCVSQWGHDFRP+Y LG L++ FP+TP LALTATA
Sbjct: 123 LVNALKEMN----LSLVAVDEAHCVSQWGHDFRPEYLKLGALRKAFPDTPFLALTATADK 178
Query: 562 SVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE-------KVAERLQ-----VGLSYGHFF 609
++D+ L L F SF+RPN+ K+ + LQ G+ Y
Sbjct: 179 QTRKDISARLHLNKPEWFISSFDRPNITYRVTLRSDGFGKLVDFLQHRPNDAGIVYCLSR 238
Query: 610 LLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L G A YH + R Q+++ KDE+ II AT+AFGMGI+K +VR
Sbjct: 239 KSVENTAAKLNANGFSALPYHAGLSKENRQENQEKFIKDEVKIIVATIAFGMGIDKSNVR 298
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV+H ++P++IE Y+QE GRAGRDG +L+YS D I +K MI
Sbjct: 299 FVVHTNMPQNIESYYQETGRAGRDGLPGEALLFYSLGDSITLKRMIES------------ 346
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
A++ + + MV++C+ CRR L +FGEK+ S C CD C +
Sbjct: 347 -----ADNEEYVRHMKAKMDTMVAFCQTK-SCRRKYLLGYFGEKY-SQDC-GNCDVCFQK 398
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+ + D+T ++ L+ V GQQF H++ V RGS + V + E LS++G GK
Sbjct: 399 NN--KSDMTIFSQMLLSAVVRLGQQFGLGHVILVLRGSQSAKVTNAQKE-LSVYGIGKDR 455
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
+ R+ L+ E +L++E Q +L+ S +
Sbjct: 456 SDDFWKRLGFQLIAEGYLLQE--------------------------DPQRPILKL-SDL 488
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
KL + + LL+ + PS ++E L+ L+ +R +L +
Sbjct: 489 AWEKLKRKE-----KFLLAMEEEVFNLREPSNKKDEA-------LFERLKNVRKVLADQ- 535
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ V Y +F +ATL +S+R PR+E+EL+ I GIG+ K+ KYG LE I + I E
Sbjct: 536 -QNVPPYIVFSDATLVEMSQRYPRSEKELIRIGGIGQLKLEKYGKTFLEEINAHIDE 591
>gi|331649648|ref|ZP_08350730.1| ATP-dependent DNA helicase RecQ [Escherichia coli M605]
gi|331041518|gb|EGI13666.1| ATP-dependent DNA helicase RecQ [Escherichia coli M605]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDSLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|433323990|ref|ZP_20401319.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
gi|433327299|ref|ZP_20403746.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
gi|432344992|gb|ELL39536.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
gi|432347541|gb|ELL42000.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESRAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|417142416|ref|ZP_11984991.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0259]
gi|417310399|ref|ZP_12097213.1| ATP-dependent DNA helicase recQ [Escherichia coli PCN033]
gi|338768042|gb|EGP22848.1| ATP-dependent DNA helicase recQ [Escherichia coli PCN033]
gi|386155440|gb|EIH11795.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0259]
Length = 611
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|419863367|ref|ZP_14385906.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H25 str.
CVM9340]
gi|388342947|gb|EIL08948.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H25 str.
CVM9340]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTVCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|416333516|ref|ZP_11670743.1| ATP-dependent DNA helicase RecQ [Escherichia coli WV_060327]
gi|320197630|gb|EFW72242.1| ATP-dependent DNA helicase RecQ [Escherichia coli WV_060327]
Length = 609
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QELCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|417202238|ref|ZP_12018488.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0522]
gi|417217784|ref|ZP_12023658.1| ATP-dependent DNA helicase RecQ [Escherichia coli JB1-95]
gi|386187125|gb|EIH75948.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0522]
gi|386193223|gb|EIH87519.1| ATP-dependent DNA helicase RecQ [Escherichia coli JB1-95]
Length = 611
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQVNGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|293417289|ref|ZP_06659914.1| ATP-dependent DNA helicase RecQ [Escherichia coli B185]
gi|291431057|gb|EFF04052.1| ATP-dependent DNA helicase RecQ [Escherichia coli B185]
Length = 611
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVVAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMTWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|309784542|ref|ZP_07679180.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1617]
gi|308927648|gb|EFP73117.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1617]
Length = 609
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQIREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE +++C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QESCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLNVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|374628883|ref|ZP_09701268.1| ATP-dependent DNA helicase RecQ [Methanoplanus limicola DSM 2279]
gi|373906996|gb|EHQ35100.1| ATP-dependent DNA helicase RecQ [Methanoplanus limicola DSM 2279]
Length = 720
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 224/651 (34%), Positives = 336/651 (51%), Gaps = 70/651 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG P Q EII+A +SG DV ++ TGGGKS+ YQLPAL+ G+ +VISPL+SL
Sbjct: 6 KKHFGYDFLYPYQEEIIDAVLSGRDVLGVVATGGGKSICYQLPALLSDGMAVVISPLISL 65
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ L + I A + +++ + I ++ LLYV+PEK+A R+
Sbjct: 66 MKDQTDSLREMGIYAESFNSSLDIRDYGRI--SADAGRGDIDLLYVSPEKMASQS--FRK 121
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L L A +DEAHC+SQWGH+FRP+Y+ LG++K++FP PV+ALTATA +V++
Sbjct: 122 LLKSAKISLFA---VDEAHCISQWGHEFRPEYRQLGLIKREFPGVPVIALTATANPAVRD 178
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D+++ L L + + SF R NL + + + L LSY G + V
Sbjct: 179 DILRQLKLKDPFVQIGSFRRSNLNYEVREKEDTLGQILSYIRGKKGESGIIYCSSRNSVE 238
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G + YH + +RA Q+++ K E+ ++ ATVAFGMGINKPDVR+V+H
Sbjct: 239 ILTKKLNSYGIYSLPYHAGLSKDERAKTQEKFIKGEVFLVVATVAFGMGINKPDVRYVLH 298
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ LP ++E Y+QE GRAGRDG+ S C+L+YS D I+ ++ I R
Sbjct: 299 YDLPPNLERYYQETGRAGRDGKSSDCILFYSRGDRIKAEYFI--------------GRMQ 344
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
A R+ E L M +CE+D CR L +FGE + C + CDNC +I
Sbjct: 345 SAKQKRIAR---EKLDEMTEFCESD-RCRVSYMLKYFGEAV-TERCGR-CDNCINPPEYI 398
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D + A +++ V G + S HI ++ RGS ++ VK+ H++L G+GK ++ E
Sbjct: 399 --DGREVATLILDCVMEAGTPYGSGHISDIIRGSKSKKVKERGHDSLKAFGSGKKFSRQE 456
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
S + +V L K Y +SS +VN + + G +V L+ +
Sbjct: 457 ISSYINQMVSSGILCRTGTK---YPVISSGERVN-----DFLSGDLSVRLKVTGRKGQGR 508
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
KS V+P+ +TP ++ L L+ LR + +E G+
Sbjct: 509 -KKSAVSPS-----------GDEETPVLSGDD------KILLDKLKSLRKKMSQE--RGI 548
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
MAY IF N+ L + + P L EI GIG K YG + L+ I S++
Sbjct: 549 MAYQIFSNSALMEMVRNKPADFSGLKEIKGIGDVKAQNYGGQFLDLISSSV 599
>gi|395330106|gb|EJF62490.1| ATP-dependent RNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 582
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 199/536 (37%), Positives = 291/536 (54%), Gaps = 39/536 (7%)
Query: 376 PWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGI 435
P+ ++ K+VFG +FRP Q + I A M G DVFVL PTG GKSLT+QLPA+ G+
Sbjct: 61 PYYNQILDTLKRVFGLPTFRPKQLDAICAAMDGRDVFVLFPTGSGKSLTFQLPAVCQKGV 120
Query: 436 TLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEK 495
T+V+SPL+SL++DQ+ L + + ++G+M+ +E+ ++ +L S K LLYVTPE+
Sbjct: 121 TIVVSPLLSLMRDQVQALQKIGVHCALINGDMKESERTKVKTQLRSRD-KPNLLYVTPEQ 179
Query: 496 VAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLAL 555
+ S + L+ L L R VIDEAHC+S WG FR Y L L++ +P P+ AL
Sbjct: 180 LQMSGYMQSTLQWLYEHGQLMRFVIDEAHCISDWGRRFRDSYTHLTELRKSYPKVPISAL 239
Query: 556 TATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC----------EKVAERLQV---- 601
TATA A V D+V L + NC+ + SFNR NL + +++A +Q
Sbjct: 240 TATANAEVVHDIVSRLDIPNCVRLKLSFNRTNLDYEVRPKKSHKACVDEIAALIQTRFPT 299
Query: 602 --GLSYGHFFLLKEFYVVSLECGHK--AAFYHGSIDPAQRAFVQKQWSKDEINIICATVA 657
G+ Y H E L +K A +H + + VQ++WS+ E+ II ATVA
Sbjct: 300 HTGIIYCHSRDKCEEVAKELRERYKLNAKHFHAGLADCDKRRVQREWSEGEVLIIVATVA 359
Query: 658 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
FGMGI+K DVR+VIHH+LP ++ Y+QE GRAGRDG+ + C+L+YSY D MI +
Sbjct: 360 FGMGIDKADVRYVIHHTLPATLANYYQETGRAGRDGRPAHCILFYSYGDVTSRLEMIRK- 418
Query: 718 VAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAH 777
++ P R +E E+ +V YC NDV CRR L FGEKFD A
Sbjct: 419 --DEKP----------EEERRWME---EDFWSVVRYCSNDVRCRRQQVLDFFGEKFDPAL 463
Query: 778 CKKTCDNCSKIKSFIEKDVTDTAKKLVEL---VKLTGQQFSSSHILEVFRGSLNQYVKKH 834
C+ CDNC +D T+ A + V L + TG + SH++ RGS + +
Sbjct: 464 CRDLCDNCRDKTPVSSEDYTEDAIRAVALFENLSTTGTPITKSHLVSALRGSKLRTMVDK 523
Query: 835 RHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
+ +G+ KHL + A R++ ++ + L V++ SS LK + +
Sbjct: 524 GFVNVDGYGSCKHLTQQLAERLIDEMLFQGVLT-TVQQKTYQDYTSSYLKASYPRV 578
>gi|417664450|ref|ZP_12314029.1| ATP-dependent DNA helicase RecQ [Escherichia coli AA86]
gi|330908124|gb|EGH36643.1| ATP-dependent DNA helicase RecQ [Escherichia coli AA86]
Length = 609
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDSLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFIALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|163803190|ref|ZP_02197072.1| ATP-dependent DNA helicase RecQ [Vibrio sp. AND4]
gi|159173011|gb|EDP57845.1| ATP-dependent DNA helicase RecQ [Vibrio sp. AND4]
Length = 611
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 215/659 (32%), Positives = 343/659 (52%), Gaps = 93/659 (14%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG +FR Q+ +I+A + G D V++PTGGGKSL YQ+PAL+ GIT+VISPL+SL
Sbjct: 21 KDVFGYQAFRDGQQLVIDAAVEGRDSLVILPTGGGKSLCYQIPALVRSGITIVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A ++ M + +++ + K L+YV+PE+V D + R
Sbjct: 81 MKDQVDQLKANGVAAECINSTMPRETLLSVYNRMHTGHLK--LVYVSPERVLMRDFIER- 137
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
LE+L L+ I +DEAHC+SQWGHDFRP+Y LG LK++F + P +ALTATA + +
Sbjct: 138 LENLP----LSMIAVDEAHCISQWGHDFRPEYAALGQLKRQFSHVPFMALTATADDATRR 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNL----------------WMDCEKVAERLQVGLSYGHFF 609
D+++ L L N ++ SF+RPN+ ++D +K G+ Y
Sbjct: 194 DILERLQLNNPEVYLGSFDRPNIRYNLVEKHKPVSQVVRYLDTQKG----NCGIIYCGSR 249
Query: 610 LLKEFYVVSLECGH-KAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
E L H +AA YH +D +RA+VQ + +D+I I+ ATVAFGMGINKP+VR
Sbjct: 250 KKVEMVTEKLCNNHIRAAGYHAGMDADERAYVQDAFQRDDIQIVVATVAFGMGINKPNVR 309
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
FV+H +P++IE Y+QE GRAGRDG + ++ Y +D ++ M+ +
Sbjct: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDE------------ 357
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
+ G + T L M ++ E CRR + L +FGE + +K C NC
Sbjct: 358 -----KDDGPQKQVETHKLNAMSAFAEAQT-CRRQVLLNYFGE-----YREKPCGNCDIC 406
Query: 789 ----KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
K F D T+ A+K + V Q F +++EV RG N V+++ H+ +S +
Sbjct: 407 LDPPKHF---DATEEARKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDQISTYAI 463
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G+ + I R L+ + L + + + +S L++ + +A L+ G + L
Sbjct: 464 GRDHSHDYWISIFRQLIHKGLLFQNITR-------NSTLQLTE-EARPLLRGDVVIELAV 515
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P + + +KSD +K N KL++ LR LR +
Sbjct: 516 PRLDTAARAAKSDKLTSK-------------------------NYDKKLFAKLRKLRKSI 550
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + + Y +F +ATL +++ +P + E+L ++G+G+ K+ KY L+ I+ I
Sbjct: 551 ADE--DSLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFLDLIQEHI 607
>gi|429964145|gb|ELA46143.1| RecQ family ATP-dependent DNA helicase [Vavraia culicis
'floridensis']
Length = 955
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 302/532 (56%), Gaps = 64/532 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
++F SFRPNQ EIINA + DVFVLMPTGGGKSL Y LPAL+ +T+VISPL+SLI
Sbjct: 450 EIFKLKSFRPNQEEIINAVLDEKDVFVLMPTGGGKSLCYFLPALLTDRVTVVISPLLSLI 509
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDY------CKYKLLYVTPEKVAKSD 500
+DQI LL+ NI + L+ M E+ + R L + K+L++TPE + +S
Sbjct: 510 EDQIQELLRLNISSLTLNSGMTVKERNVVFRVLREGLRVGNVRKRVKILFLTPETLVQSH 569
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATAT 560
L L+ +AR+VIDEAHCVS WG+DFRPDY+ L ++K F T ++ALTATAT
Sbjct: 570 ALQGILKGN-----IARVVIDEAHCVSHWGNDFRPDYKKLKMVKDMFGCT-IMALTATAT 623
Query: 561 ASVKEDVVQALGLVN--------CIIFRQSFNRPNL-WMDCEKVAERLQVGLSYGHFFLL 611
V+ DV L + + FR SFNR NL ++ K + + +S+ + +
Sbjct: 624 KRVEYDVKGCLFGADRPLSSDQHVLTFRSSFNRKNLKYIVLHKKKDTISQIVSFINTYYP 683
Query: 612 KE---FYVVSL----ECGHK------AAFYHGSIDPAQRAFVQKQWSKDEINIICATVAF 658
YV+S E +K + +YH + +R +Q++W+ D+I +I ATVAF
Sbjct: 684 SSPGIIYVISKREAEEVSYKLNNHITSMYYHAGLTKKERNKIQREWTNDKIRVIVATVAF 743
Query: 659 GMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGV 718
GMGINK DVR+VIH+S+P S+E Y+QE GRAGRDG S C+L+YSY D R+ +++ +
Sbjct: 744 GMGINKRDVRYVIHYSIPYSLENYYQETGRAGRDGLESMCILFYSYGDKSRLNNLLKR-- 801
Query: 719 AEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHC 778
ET+ +NL R++ YCEN +CRR L +F E+ + C
Sbjct: 802 ----------------------ETDRDNLNRVIEYCENITECRRKQILQYFNERL-TERC 838
Query: 779 KKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHET 838
CDNC+K + D T+ A+ + +LV+ ++ S +HI+ V RGS ++ V +R
Sbjct: 839 TG-CDNCNKTGKTKQIDCTEHAQIVAKLVR-ENERLSLTHIVNVLRGSKSKAVDGYRES- 895
Query: 839 LSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKA 890
+ +G + + + + RI+R ++I +++EV + G V+ L V K
Sbjct: 896 -AYYGVLRDVKRGQVERIVR-MMIGKGMLKEVHVKNRMGYVNGYLVVGAVKV 945
>gi|83815945|ref|YP_444445.1| ATP-dependent DNA helicase RecQ [Salinibacter ruber DSM 13855]
gi|83757339|gb|ABC45452.1| ATP-dependent DNA helicase RecQ [Salinibacter ruber DSM 13855]
Length = 607
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 210/656 (32%), Positives = 334/656 (50%), Gaps = 87/656 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG +FRP Q ++ + G D VLMPTGGGKSL YQ+PA++ G +V+SPL+SL
Sbjct: 13 QSVFGYETFRPYQEPVVQRLVDGGDALVLMPTGGGKSLCYQIPAMVRDGPGIVVSPLISL 72
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L Q + A L+ ++ E++ + L + + L YV PE+ + +
Sbjct: 73 MQDQVDALQQVGVKAAVLNSSLGRKEREAVEHRLTAG--ELDLCYVAPERATRD-----R 125
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
++L +R + + IDEAHC+SQWGHDFRP+Y L L+ F P +A+TATA +
Sbjct: 126 FKTLLSRARPSLLAIDEAHCISQWGHDFRPEYLALADLRGDFAQIPCIAVTATADPPTQR 185
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKE-------FYVVS 618
V+ LG+ + F F+RPN+ E R + L H F+ +E Y +S
Sbjct: 186 VVLDRLGMTDEDRFVAGFDRPNIRYVVEPKGNRPRQQL---HEFIEREHPGQNGIVYCLS 242
Query: 619 -----------LECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDV 667
+ GH A YH + +R+ Q ++ +++ I+ ATVAFGMGI+KPDV
Sbjct: 243 RNGVETTADWLTDHGHTAVPYHAGLSDHKRSEHQDRFLREDGLIVVATVAFGMGIDKPDV 302
Query: 668 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPG 727
RFV H +PK++E Y+QE GRAGRDG+ ++ + Y D +R++ +I
Sbjct: 303 RFVAHLDVPKTLEAYYQETGRAGRDGRPATAWMAYRRGDVVRMRQLID------------ 350
Query: 728 HNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK 787
+ A + T L ++ YCE DCRR + L +FGE C CDNC +
Sbjct: 351 ----DSAENDEHRWTQRHKLNALLGYCEAP-DCRRKVLLNYFGEDMGGDTCGN-CDNCLR 404
Query: 788 IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
E T A+K + + TGQ+F S H+ +V G + +++H H+T+S +G G
Sbjct: 405 PPDTWEG--TTAAQKALSCIARTGQRFGSGHVTDVLLGKDTEKIQRHDHDTVSTYGIGAD 462
Query: 848 LAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSA 907
+K+E +LR LV + + +V YG+++ ++ GR+ V R +A
Sbjct: 463 RSKAEWRSVLRQLVAKGMVEVDVMG---YGALTLT-----EDCRPVLKGRETVAFRDGAA 514
Query: 908 I----NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTL 963
N+TK + D PA G P+ E L+ +LR RT
Sbjct: 515 ASASPNTTKTATDDPLPADG-----------------PERE--------LFEALRERRTQ 549
Query: 964 LVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+ + + V Y IF + TL+ + + P+++ + ++G+G K+ +YG + L+TI
Sbjct: 550 IATD--QEVPPYVIFNDKTLRAMVEHRPQSKSDFRALHGVGDVKLERYGRQFLDTI 603
>gi|432604655|ref|ZP_19840881.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE66]
gi|431136589|gb|ELE38447.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE66]
Length = 611
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSKIKSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC ++ D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKRYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|401765702|ref|YP_006580709.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400177236|gb|AFP72085.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 609
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 215/651 (33%), Positives = 337/651 (51%), Gaps = 80/651 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL+
Sbjct: 19 ETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLM 78
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ LL + A L+ +QQE++ + + +LLY+ PE++ D L L
Sbjct: 79 KDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTG--QVRLLYIAPERLM-LDNFLDHL 135
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + + D
Sbjct: 136 AHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRLD 191
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEF 614
+V+ LGL + I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 192 IVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVED 251
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 252 TAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 311
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 312 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP---------- 356
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSFI 792
G++ + L M ++ E CRRL+ L +FGE ++ C NC +
Sbjct: 357 --QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCGNCDICLDPPK 408
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 409 QYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEH 468
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
I+R L+ F + + + S L++ ++ L R +V L K
Sbjct: 469 WVSIIRQLIHLGFATQNIAQ-------HSALQLTEAARPVL---RGDVEL---------K 509
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
L+ V K P Q N KL++ LR LR + E E +
Sbjct: 510 LAVPRVVALK---------------PRVMQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 552
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
Y +F +ATL +++++P + E+L +NG+G K+ ++G + I S +
Sbjct: 553 PPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIRSHV 603
>gi|161830707|ref|YP_001596401.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii RSA 331]
gi|161762574|gb|ABX78216.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii RSA 331]
Length = 601
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 220/648 (33%), Positives = 344/648 (53%), Gaps = 75/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG +FRP Q +IIN+ ++G D FVLMPTGGGKSL YQ+PAL+ G+ +V+SPL+SL
Sbjct: 10 RQTFGYENFRPLQEKIINSVIAGEDNFVLMPTGGGKSLCYQIPALVREGVGIVVSPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L A + + E ++ L L+++ + LLY+ PE++ L R
Sbjct: 70 MQDQVQALNANGAAAALYNSTLTEAEARKNLARLHNN--ELDLLYIAPERLMTESFLSR- 126
Query: 506 LESLNAREL-LARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
RE+ LA + IDEAHCVSQWGHDFRP+Y LG L++ FP P +ALTATA +
Sbjct: 127 -----LREVKLALVAIDEAHCVSQWGHDFRPEYLRLGELREYFPKVPFIALTATADKQTR 181
Query: 565 EDVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFFLLKEFYV 616
+D++Q L L + SFNRPN+ ++ +K +L L +G + L V
Sbjct: 182 QDILQRLRLTKANVHIASFNRPNIRYTLLEKQKSYNQLVNFLKDRKADFGIVYCLSRNRV 241
Query: 617 VSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ G+ A YH + AQR Q+ + +D++NII AT+AFGMGI+KP+VRFV+
Sbjct: 242 EEVAAKLQADGYSALPYHAGLPAAQRGKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFVV 301
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ LPK IEGY+QE GRAGRDG S +L Y D +K I G E H +
Sbjct: 302 HYDLPKHIEGYYQETGRAGRDGLPSEALLLYGLRDIAVIKSFIENGNNEIRKRIELH-KL 360
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
N M ++ E CRR + L +F E + C CD C + S
Sbjct: 361 NC----------------MSAFAEART-CRRRVLLNYFNESL-TEDC-GNCDIC--LNSP 399
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ T A+K + V +++ ++ ++V RG + +K+ H+ LS +G GK L+++
Sbjct: 400 ETYNGTIEAQKALSCVYRVRERYGVNYFIDVLRGKDDPRIKRAGHDRLSTYGIGKELSQN 459
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
E + R L+ +L +++ S+L++ AH+++ G++ ++L P
Sbjct: 460 EWYSVFRQLIHLGYLEQDLAN-------YSILRLT-PLAHSILRGKETLILAKPR----- 506
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K ++L K ++ ++ + P + A L+ LR LR + +E+
Sbjct: 507 ---------EKYNVLKKKYKAAKANSSASPYD-------AALFEKLRELRKAIARES--R 548
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V + IF +A+L ++ R+P ++ E L ING+G+ K+ YG L I
Sbjct: 549 VAPFIIFSDASLVEMASRLPVSDSEFLAINGVGQKKLENYGKLFLHLI 596
>gi|417692248|ref|ZP_12341449.1| ATP-dependent DNA helicase RecQ [Shigella boydii 5216-82]
gi|332084419|gb|EGI89615.1| ATP-dependent DNA helicase RecQ [Shigella boydii 5216-82]
Length = 609
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVVL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|191174273|ref|ZP_03035782.1| ATP-dependent DNA helicase RecQ [Escherichia coli F11]
gi|300979425|ref|ZP_07174554.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 200-1]
gi|331660168|ref|ZP_08361104.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA206]
gi|386621651|ref|YP_006141231.1| ATP-dependent DNA helicase [Escherichia coli NA114]
gi|387831714|ref|YP_003351651.1| DNA helicase RecQ [Escherichia coli SE15]
gi|417285103|ref|ZP_12072394.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07793]
gi|419912569|ref|ZP_14431019.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD1]
gi|422371441|ref|ZP_16451821.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 16-3]
gi|422373962|ref|ZP_16454257.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 60-1]
gi|432424226|ref|ZP_19666762.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE178]
gi|432468160|ref|ZP_19710236.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE205]
gi|432473175|ref|ZP_19715210.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE206]
gi|432502379|ref|ZP_19744127.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE216]
gi|432561089|ref|ZP_19797741.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE49]
gi|432585350|ref|ZP_19821740.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE57]
gi|432696687|ref|ZP_19931877.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE162]
gi|432708217|ref|ZP_19943291.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE6]
gi|432715681|ref|ZP_19950704.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE8]
gi|432734575|ref|ZP_19969396.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE45]
gi|432761660|ref|ZP_19996147.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE46]
gi|432891418|ref|ZP_20104136.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE165]
gi|432901413|ref|ZP_20111499.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE192]
gi|432923092|ref|ZP_20125798.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE173]
gi|432929782|ref|ZP_20130734.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE175]
gi|432983329|ref|ZP_20172095.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE211]
gi|433030772|ref|ZP_20218615.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE109]
gi|433075106|ref|ZP_20261740.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE129]
gi|433080034|ref|ZP_20266548.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE131]
gi|433098652|ref|ZP_20284816.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE139]
gi|433108083|ref|ZP_20294040.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE148]
gi|433122440|ref|ZP_20308093.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE157]
gi|433185565|ref|ZP_20369797.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE85]
gi|190905456|gb|EDV65086.1| ATP-dependent DNA helicase RecQ [Escherichia coli F11]
gi|281180871|dbj|BAI57201.1| DNA helicase RecQ [Escherichia coli SE15]
gi|300308016|gb|EFJ62536.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 200-1]
gi|315296805|gb|EFU56097.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 16-3]
gi|324014666|gb|EGB83885.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 60-1]
gi|331052736|gb|EGI24771.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA206]
gi|333972152|gb|AEG38957.1| ATP-dependent DNA helicase [Escherichia coli NA114]
gi|386250344|gb|EII96511.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07793]
gi|388391428|gb|EIL52895.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD1]
gi|430941449|gb|ELC61596.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE178]
gi|430990518|gb|ELD06948.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE205]
gi|430995341|gb|ELD11638.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE206]
gi|431025701|gb|ELD38799.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE216]
gi|431088285|gb|ELD94181.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE49]
gi|431114336|gb|ELE17880.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE57]
gi|431230687|gb|ELF26462.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE162]
gi|431251083|gb|ELF45101.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE8]
gi|431254661|gb|ELF47929.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE6]
gi|431270562|gb|ELF61725.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE45]
gi|431305336|gb|ELF93665.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE46]
gi|431422057|gb|ELH04252.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE192]
gi|431429823|gb|ELH11658.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE165]
gi|431434505|gb|ELH16154.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE173]
gi|431439929|gb|ELH21260.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE175]
gi|431487979|gb|ELH67620.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE211]
gi|431539939|gb|ELI15573.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE109]
gi|431582631|gb|ELI54644.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE129]
gi|431592999|gb|ELI63564.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE131]
gi|431611967|gb|ELI81226.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE139]
gi|431623503|gb|ELI92172.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE148]
gi|431638407|gb|ELJ06442.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE157]
gi|431701482|gb|ELJ66398.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE85]
Length = 611
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QISLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|260870546|ref|YP_003236948.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H- str. 11128]
gi|415821875|ref|ZP_11510656.1| ATP-dependent DNA helicase RecQ [Escherichia coli OK1180]
gi|417594293|ref|ZP_12244979.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2534-86]
gi|419199610|ref|ZP_13742897.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8A]
gi|419206760|ref|ZP_13749897.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8B]
gi|419219119|ref|ZP_13762084.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8E]
gi|419892091|ref|ZP_14412124.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9570]
gi|419893745|ref|ZP_14413707.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9574]
gi|420088554|ref|ZP_14600425.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9602]
gi|420094057|ref|ZP_14605670.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9634]
gi|424768555|ref|ZP_18195825.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257766902|dbj|BAI38397.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H- str. 11128]
gi|323177836|gb|EFZ63420.1| ATP-dependent DNA helicase RecQ [Escherichia coli OK1180]
gi|345331400|gb|EGW63860.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2534-86]
gi|378039987|gb|EHW02463.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8B]
gi|378042931|gb|EHW05375.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8A]
gi|378074570|gb|EHW36605.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8E]
gi|388348402|gb|EIL14007.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9570]
gi|388366194|gb|EIL29940.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9574]
gi|394389845|gb|EJE66943.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9602]
gi|394397257|gb|EJE73536.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CVM9634]
gi|421945970|gb|EKU03140.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 609
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQVNGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|283834583|ref|ZP_06354324.1| ATP-dependent DNA helicase RecQ [Citrobacter youngae ATCC 29220]
gi|291069712|gb|EFE07821.1| ATP-dependent DNA helicase RecQ [Citrobacter youngae ATCC 29220]
Length = 609
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 343/661 (51%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LEMGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ S + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSG--QVRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLGHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+V+ LGL +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADETTRLDIVRLLGLNEPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G A YH ++ + RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSRGISAGAYHAGLENSVRAEVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++L+ L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------AGQLLDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ +++ H+ L ++
Sbjct: 399 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVLRGANNQRIRELGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ + A ++ G + L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQMTDA-ARPVLRGEVPLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPRAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 AIADE--ENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|237747534|ref|ZP_04578014.1| ATP-dependent DNA helicase [Oxalobacter formigenes OXCC13]
gi|229378896|gb|EEO28987.1| ATP-dependent DNA helicase [Oxalobacter formigenes OXCC13]
Length = 608
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 225/642 (35%), Positives = 337/642 (52%), Gaps = 76/642 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ VFG SFR Q EII SGHD VLMPTGGGKSL YQ+PAL+ G+ +VISPL++L
Sbjct: 14 QSVFGYSSFRDQQEEIIAEIASGHDALVLMPTGGGKSLCYQIPALVRDGVGIVISPLIAL 73
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L A + A +L+ + + E I R + + + L+Y+ PE++ L
Sbjct: 74 MQDQVDALETAGVRAAYLNSTLSYEEASRIERAVLKN--ELDLVYIAPERLVTERCL--- 128
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ ++ +A IDEAHCVSQWGHDFRP+Y L IL + FP P +ALTATA A +
Sbjct: 129 --NWLSKTKIALFAIDEAHCVSQWGHDFRPEYIQLSILHEYFPAVPRIALTATADAHTRA 186
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQVGLSY---------GHFFLLK--- 612
+++ L L N F SF+RPN+ + EK R Q+ L + G + L
Sbjct: 187 EILSRLKLENSRQFISSFDRPNIRYCIVEKENGRHQL-LDFIQSEHPGDAGIVYCLSRKK 245
Query: 613 --EFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E LE A YH +D R+ Q ++ ++E ++ AT+AFGMGI+KPDVRFV
Sbjct: 246 VDEMVAFLLEHHINALPYHAGMDTQTRSVNQSRFLREEGIVMVATIAFGMGIDKPDVRFV 305
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
H LPKS+EGY+QE GRAGRDG ++ + Y D ++ + MI + A+ P H R
Sbjct: 306 AHLDLPKSMEGYYQETGRAGRDGNPATAWMSYGLQDVVQQRRMIDESDAD-----PEHRR 360
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ L ++ +CE + CRR+ L +FGE +A C CD C +
Sbjct: 361 IQIG-----------KLDALLGFCET-LTCRRVRLLEYFGE--SAAPC-GNCDTC--LTP 403
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
+ KD T +KL+ + GQ+F + H+++V RG ++ V + RH LS G G +
Sbjct: 404 PVAKDGTKDMQKLLSTIYRVGQRFGALHVIDVLRGISSERVLQWRHNQLSTFGIGAGQSV 463
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
+E +LR V ++ ++ D Y + LK+++ A ++ G + V+LR
Sbjct: 464 AEWRSVLRQAVAAQYVWVDM---DEYNA----LKLSEL-ARPILKGEKKVLLR--QYQKP 513
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
K K P ++ P Q Q KL+ LR R + +E +
Sbjct: 514 EKKRKEKAQPKFSQIV----------LPPQEQ---------KLFEKLRWWRMEVARE--Q 552
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYG 1012
+ AY IF +ATL+ ++ P T +EL +I+GIG ++S++G
Sbjct: 553 NMPAYVIFQDATLREIALAKPVTIDELKQISGIGDKRLSQWG 594
>gi|390943602|ref|YP_006407363.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
gi|390417030|gb|AFL84608.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
Length = 725
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 225/665 (33%), Positives = 355/665 (53%), Gaps = 86/665 (12%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
++ N K++FG FR NQ I++ + G + FV+MPTG GKSL YQLPA+I G +VIS
Sbjct: 5 VKENLKEIFGFSQFRGNQEAIVDNILGGSNTFVIMPTGAGKSLCYQLPAVIKNGTAVVIS 64
Query: 441 PLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSD 500
PL++L+++Q+ L I A FL+ + +E ++ +E+ + K LLYV PE + K +
Sbjct: 65 PLIALMKNQVDQLNAFGINAYFLNSTLNKSETNKVKKEVLAGNTK--LLYVAPESLTKEE 122
Query: 501 VLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGL-GILKQKFPNTPVLALTATA 559
+ + L+ N ++ + IDEAHC+S+WGHDFRP+Y+ + I+ Q P++ALTATA
Sbjct: 123 NV-KFLKEAN----ISFVAIDEAHCISEWGHDFRPEYRRIKSIIAQIGEKLPIIALTATA 177
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCE---KVAERLQVGLSY--------GHF 608
T V++D+ + L + +F+ SFNR NL+ + K + Q+ + Y G
Sbjct: 178 TPKVQQDIQRNLQMEEADLFKSSFNRTNLYYEVRPKIKNETKKQI-IKYIKGQKGKSGII 236
Query: 609 FLLKEFYVVSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
+ L V + G AA YH +D R Q + +E+++I AT+AFGMGI+
Sbjct: 237 YCLSRKKVEEIASLLKVNGINAAPYHAGLDQNVRIKNQDDFLNEELDVIVATIAFGMGID 296
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KPDVR+VIH+ +PKS+EGY+QE GRAGRDG C+++Y Y D I++ + P
Sbjct: 297 KPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYKYDDIIKLDKF-----NKDKP 351
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
T N ++L L M +Y E+ + CRR L +FGE + C CD
Sbjct: 352 VTEREN-------AKIL------LQEMAAYAESSI-CRRKTLLHYFGE-YMEKDC-GFCD 395
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + F ++ TA +E VK T +F+ HI++V RG N Y+K + H+ LS+
Sbjct: 396 NCKHPTEKFEGQNFLVTA---IEAVKETNNRFNVEHIVKVIRGEQNDYMKSYGHDKLSVF 452
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G GK + ++R +I +FL ++++ YG V+KV Q K + I +V++
Sbjct: 453 GIGKDEDERLWKTVVRQAMINNFLEKDIEN---YG----VIKVTQ-KGLDFIKNPYSVMI 504
Query: 903 RFPSAINSTKLSKS--DVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRML 960
++ S D++ L GK KL+ L++
Sbjct: 505 SKDHDFEQMLVNDSTEDIS------LGGKA------------------YDEKLFELLKLE 540
Query: 961 RTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
R + K +G+ Y IF + +L+ ++ P T EEL +ING+G KV+K+G L+ IE
Sbjct: 541 RKKVAK--SKGLPPYVIFQDPSLEEMATVYPTTREELAQINGVGMGKVTKFGSSFLKLIE 598
Query: 1021 STIKE 1025
+ ++E
Sbjct: 599 NYVEE 603
>gi|341891862|gb|EGT47797.1| hypothetical protein CAEBREN_03628 [Caenorhabditis brenneri]
Length = 617
Score = 334 bits (857), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/484 (38%), Positives = 269/484 (55%), Gaps = 45/484 (9%)
Query: 347 VEREPFIPKIIKVNYIEGSND--QKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINA 404
V+++ I + I++ E S+ +W F W+ + K F SFRP QR INA
Sbjct: 38 VQKKQAIERKIELKTHEDSDVVVDRWDRDGFSWSDEANKILKDRFHLESFRPLQRAAINA 97
Query: 405 TMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLS 464
MS D V++ TGGGKSL YQLPAL+ G+TLV+SPL+SL++DQI+ L + NI A+ L+
Sbjct: 98 VMSKEDAVVILSTGGGKSLCYQLPALLTKGLTLVVSPLISLVEDQILQLRKLNIDASCLN 157
Query: 465 GNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAH 524
+ E + + + + +++LLYVTPEK+AKS ++ +LE + L I IDE H
Sbjct: 158 ASTSKEETKRVEDAITNKDSQFRLLYVTPEKLAKSKRMMNKLEKSLSVGFLKLIAIDEVH 217
Query: 525 CVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFN 584
C SQWGHDFR DY L +LK++F P+L LTATAT++V +DV LG+ ++FR FN
Sbjct: 218 CCSQWGHDFRTDYAFLNVLKRQFKGVPILGLTATATSNVLDDVKDMLGIQAALVFRAGFN 277
Query: 585 RPNLWMDC-------EKVAERL----------QVGLSYGHFFLLKEFYVVSLEC-GHKAA 626
R NL + E+ AE + Q G+ Y E L+ G +A
Sbjct: 278 RSNLKYEVISKKSSDEECAEEIAHVINTQFSGQTGIVYCLSRNDCEKMATLLKTKGIRAK 337
Query: 627 FYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQEC 686
YH ++P++++ + W +I +I ATVAFGMGI+KPDVRFVIHH++PKSIE Y+QE
Sbjct: 338 HYHAYMEPSEKSSSHQNWISGKIQVIVATVAFGMGIDKPDVRFVIHHTIPKSIENYYQES 397
Query: 687 GRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTEN 746
GRAGRDG ++C+LY+ SD + M+ Q T N
Sbjct: 398 GRAGRDGLPATCILYFKLSDVFKQSSMVQQD-----------------------RTGLSN 434
Query: 747 LLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS--FIEKDVTDTAKKLV 804
L +V Y + CRR+ HF E ++ + C+K CD C + S DV+ K V
Sbjct: 435 LYNIVRYASDSSTCRRVKMAEHFEEAWEPSWCQKQCDVCQRATSSELKSTDVSKETKIAV 494
Query: 805 ELVK 808
++++
Sbjct: 495 QIIE 498
>gi|255542856|ref|XP_002512491.1| DNA helicase hus2, putative [Ricinus communis]
gi|223548452|gb|EEF49943.1| DNA helicase hus2, putative [Ricinus communis]
Length = 586
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/354 (49%), Positives = 231/354 (65%), Gaps = 17/354 (4%)
Query: 381 LEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVIS 440
E N +FGN SFRP Q + A+++ D FVLMPTGGGKSL YQLPA + PG+T+V+S
Sbjct: 193 FELANVVIFGNMSFRPLQHQACKASVAKRDCFVLMPTGGGKSLCYQLPATLKPGVTVVVS 252
Query: 441 PLVSLIQDQIMHL-LQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKS 499
PL+SLIQDQI+ L L+ IPATFL+ ++ +L+EL D KLLYVTPE++A +
Sbjct: 253 PLLSLIQDQIITLNLKFGIPATFLNSQQTASQAAAVLQELRKDKPSCKLLYVTPERIAGN 312
Query: 500 DVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATA 559
L L+ L+ + LA V+DEAHCVSQWGHDFRPDY+GLG LKQ F + P++ALTATA
Sbjct: 313 LGFLEILKCLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGCLKQNFRDVPLVALTATA 372
Query: 560 TASVKEDVVQALGLVNCIIFRQSFNRPNLWMDC-EKVAERL-QVGL--------SYGHFF 609
T SV+ED+++AL + N ++ SF+RPNL + K E L QVG G +
Sbjct: 373 THSVREDILKALRIPNALVLETSFDRPNLKYEVIGKTKESLKQVGQLLKDRFKNQCGIVY 432
Query: 610 LLKEFYVVSL------ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
L + + + +C K +YH + QR VQ++W E +I+CAT+AFGMGI+
Sbjct: 433 CLSKNECIEVSNFLNDKCKIKTVYYHAGLATRQRVEVQRKWHMGEAHIVCATIAFGMGID 492
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQG 717
KPDVRFVIH++L KSIE Y+QE GRAGRD ++C+ Y DF RV M+ G
Sbjct: 493 KPDVRFVIHNTLSKSIESYYQESGRAGRDNLPAACIALYQKKDFSRVVCMLRSG 546
>gi|301025732|ref|ZP_07189247.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 69-1]
gi|419918818|ref|ZP_14436995.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD2]
gi|300395855|gb|EFJ79393.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 69-1]
gi|388389458|gb|EIL50989.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD2]
Length = 611
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL+ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFVKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|110644147|ref|YP_671877.1| ATP-dependent DNA helicase RecQ [Escherichia coli 536]
gi|419702662|ref|ZP_14230251.1| ATP-dependent DNA helicase RecQ [Escherichia coli SCI-07]
gi|110345739|gb|ABG71976.1| ATP-dependent DNA helicase RecQ [Escherichia coli 536]
gi|380346195|gb|EIA34494.1| ATP-dependent DNA helicase RecQ [Escherichia coli SCI-07]
Length = 609
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QISLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|417714622|ref|ZP_12363574.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-272]
gi|417719543|ref|ZP_12368424.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-227]
gi|332998230|gb|EGK17832.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-272]
gi|333013771|gb|EGK33134.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-227]
Length = 609
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/661 (31%), Positives = 343/661 (51%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + +
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEE------- 354
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 355 ----------KQQGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|432871713|ref|ZP_20091743.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE147]
gi|431407675|gb|ELG90884.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE147]
Length = 611
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCCTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|395218411|ref|ZP_10402063.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
gi|394454486|gb|EJF09132.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
Length = 624
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 334/653 (51%), Gaps = 77/653 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG FRP Q II + DV VLMPTGGGKS+ YQ+PA++ PG+ +V+SPL++L
Sbjct: 13 KLYFGYEQFRPMQEHIITNILQQKDVVVLMPTGGGKSVCYQVPAVVMPGLCVVVSPLIAL 72
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL IPA +L+ + EQ +I E S + KLLYV+PEK+ +
Sbjct: 73 MKDQVEALLANGIPAAYLNSSQTADEQYQI--EEKSLAGQIKLLYVSPEKLLSAGFF--- 127
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
S R ++ +DEAHC+S WGHDFRP+Y L LKQ+FP PV+ALTATA ++
Sbjct: 128 --SFLKRLQVSLFAVDEAHCISAWGHDFRPEYTQLRALKQQFPAVPVVALTATADKLTQK 185
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D+ + L L +F SF+RPN+ + R + G + L
Sbjct: 186 DIQEQLQLRQPEVFVASFDRPNINLMVLPGQNRFNKITDFLSRRHGQPGIIYCLSRKATE 245
Query: 618 SL-----ECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL E G+ A FYH + QR+ Q+ + +D++ I+CAT+AFGMGI+K +VR+VIH
Sbjct: 246 SLAGKLRENGYNATFYHAGMSAQQRSKAQESFLRDDVLIVCATIAFGMGIDKSNVRWVIH 305
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
++LPK++EGY+QE GRAGRDG +S +L+YS++D + ++ M+S Q+
Sbjct: 306 YNLPKNVEGYYQEIGRAGRDGAKSDALLFYSFADVMNLRTMLSDNDKSQN---------- 355
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
E L RM + E CRR + L +FGE+ S C CD C S
Sbjct: 356 --------ELQLVKLERMQQFAEATF-CRRRILLQYFGEQM-SRDC-GNCDICRNPPSRF 404
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
D T A+K + + + ++ + S +++V RGS N V ++ + +GAG+ + +
Sbjct: 405 --DGTLIAQKALSAIARSQEKLNMSLLVDVLRGSRNSQVMAGGYDRIKTYGAGRDIGTLD 462
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
+R L H ++ L+E + LK+ + L GR+ +++F A T+
Sbjct: 463 WNRYL-HQMLNAGLVELAYDQNY------TLKLTEQSRQVLFDGRKIELVKFEDAKQQTE 515
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
N +P+ E+ + L+ LR LR L E + V
Sbjct: 516 ----------------------NLQREKPKREI---IKDALFERLRALRKRLADE--QNV 548
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
Y +F ++TLQ ++ P +L I+G+G K +YG + I + + E
Sbjct: 549 PPYVVFTDSTLQEMAAEKPANRIAMLAISGVGAQKFERYGHSFINEIIAFLTE 601
>gi|262040869|ref|ZP_06014095.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041758|gb|EEW42803.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 608
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 210/654 (32%), Positives = 336/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ + QE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQLQEVMAGCRSG--QVRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N LA + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LANWN----LAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ +++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGEVPLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKPFMALIRAHV 603
>gi|311281501|ref|YP_003943732.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae SCF1]
gi|308750696|gb|ADO50448.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae SCF1]
Length = 609
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/652 (32%), Positives = 343/652 (52%), Gaps = 84/652 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQIPALVLNGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +Q E++ + K +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQNREQQLEVMAGCRTG--KIRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + +
Sbjct: 135 LAHWNP----VMLAVDEAHCISQWGHDFRPEYAALGQLRQRFPAVPFMALTATADDTTRL 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ LGL + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLGLNDPLIQLSSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G+ AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGYSAAAYHAGLENGVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP--------- 356
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSF 791
+G++ + L M ++ E CRRL+ L +FGE +++C NC +
Sbjct: 357 ---AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QESCGNCDICLDPP 407
Query: 792 IEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
+ D + A+K + + Q+F +++EV RG+ +Q +++ H+ L ++G G+ +
Sbjct: 408 RQYDGLEDARKALSTIYRVNQRFGMGYVVEVLRGANSQRIRELGHDKLPVYGIGREQSHE 467
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
++R L+ F Q+ AH+ SA+ T
Sbjct: 468 HWVSVIRQLIHLGF-------------------ATQNIAHH-------------SALQLT 495
Query: 912 KLSKSDVTPAKGSLLSGKLSPSR--NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+ ++ P + + +L+ R P Q N KL++ LR LR ++ E
Sbjct: 496 EAAR----PILRAEVPLQLAVPRIVALKPRVAQKSYGGNYDRKLFAKLRKLRKVIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
E + Y +F +ATL +++++P + ++L +NG+G K+ ++G + I +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQMPVSPSDMLSVNGVGMRKLERFGREFMALIRA 601
>gi|417610582|ref|ZP_12261072.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_DG131-3]
gi|345353354|gb|EGW85588.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_DG131-3]
Length = 603
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 3 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 62
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 63 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 120
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 121 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 175
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK Q+ G+
Sbjct: 176 ATADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKPLDQLMRYVQEQCGKSGII 235
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 236 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 295
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 296 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 350
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 351 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 392
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 393 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 452
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 453 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 504
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 505 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 538
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 539 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 596
Query: 1023 I 1023
+
Sbjct: 597 V 597
>gi|410619883|ref|ZP_11330774.1| ATP-dependent DNA helicase RecQ [Glaciecola polaris LMG 21857]
gi|410160661|dbj|GAC34912.1| ATP-dependent DNA helicase RecQ [Glaciecola polaris LMG 21857]
Length = 623
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/654 (31%), Positives = 340/654 (51%), Gaps = 90/654 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG FR Q+E+I + G DV VLMPTGGGKSL YQ+PAL+ G+T+V+SPL++L
Sbjct: 38 KTVFGYDEFRDGQQEVIEQILHGQDVLVLMPTGGGKSLCYQIPALVLGGLTIVVSPLIAL 97
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L+ + + A +++ N+ E + R + +YKL+YV PE++ + D + R
Sbjct: 98 MKDQVDALVASGVSAAYINSNLSSEEMLNVYRGMQDG--RYKLIYVAPERLMQFDFMQR- 154
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L SLN +A +DEAHCVS WGHDFR +Y+ LG LKQ+FP PV+ LTATA + +
Sbjct: 155 LHSLN----IALFAVDEAHCVSHWGHDFRKEYRQLGQLKQQFPAVPVIGLTATADITTRS 210
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-------WMDCEKVAERLQVGLSYGHFFL-----LKE 613
D++Q L L +F+ SF+RPN+ + ++V + ++ G + + +
Sbjct: 211 DILQQLALQEPFVFKGSFDRPNIRYNQLFKYKATDQVIQYVKQQDGSGIIYCNSRKKVDD 270
Query: 614 FYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
+ G A YH ++ R +Q+ + +D I+II ATVAFGMGINK +VRFV+H
Sbjct: 271 LSMALARQGINCAGYHAGLEGPIRDKIQRDFIQDNIDIIVATVAFGMGINKSNVRFVVHF 330
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
LP+S+E Y+QE GRAGRDG + +L + D R++ I G
Sbjct: 331 DLPRSVEAYYQETGRAGRDGMPAEALLLFDEKDAARIRQWIGMG---------------- 374
Query: 734 ANSGRV-LETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI---- 788
N R+ +E + + + CRR + L +F E + K C NC
Sbjct: 375 DNPARLDIELQKFAAMEAFAEAQT---CRRQVLLNYFSE-----YSAKDCGNCDICLDPP 426
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
K F D +A+ ++ + GQ +S ++++V RG + + + H+ LS GK
Sbjct: 427 KRF---DGKVSAQMVLSCIYRLGQSVASQYVIDVLRGKKLKRIIEQGHDGLSTFAIGKDK 483
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS-A 907
+ + I+ L+ + FL ++ + ++VLK+ ++ A ++ G+ + L P
Sbjct: 484 SDAHWHNIINQLIHKGFLRIDITQ-------NAVLKLTEA-ARTVLSGQFELALAVPRLT 535
Query: 908 INSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKE 967
I+S K SK ++N KL++ L+ LR + +
Sbjct: 536 IDSAKKSKLK----------------------------EMNYDRKLFAKLKHLRKSIAER 567
Query: 968 AGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
E V + +F +ATL ++ ++P++ E LE+NG+G+ K+ +YG L I +
Sbjct: 568 --EDVPPFVVFSDATLADMADKLPQSRMEFLEVNGVGQTKLDRYGSEFLSAISA 619
>gi|7428315|pir||BVECRQ DNA helicase recQ - Escherichia coli (strain K-12)
Length = 610
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 345/661 (52%), Gaps = 85/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEAARPVL--------- 504
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
A +S +L+ + K P Q N KL++ LR LR
Sbjct: 505 ----AESSLQLAVPRIVALK---------------PKAMQKSFGGNYDRKLFAKLRKLRK 545
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 546 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 603
Query: 1023 I 1023
+
Sbjct: 604 V 604
>gi|422381292|ref|ZP_16461460.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 57-2]
gi|324007518|gb|EGB76737.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 57-2]
Length = 611
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QISLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMVLIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|422784511|ref|ZP_16837291.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10509]
gi|323974402|gb|EGB69530.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10509]
Length = 609
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGSDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ V+ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRVRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPISASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|386282516|ref|ZP_10060164.1| ATP-dependent DNA helicase recQ [Escherichia sp. 4_1_40B]
gi|386120366|gb|EIG68995.1| ATP-dependent DNA helicase recQ [Escherichia sp. 4_1_40B]
Length = 611
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGCDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|432399769|ref|ZP_19642542.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE25]
gi|432408892|ref|ZP_19651593.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE28]
gi|432725287|ref|ZP_19960200.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE17]
gi|432729896|ref|ZP_19964768.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE18]
gi|432743585|ref|ZP_19978298.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE23]
gi|432988316|ref|ZP_20176995.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE217]
gi|433113097|ref|ZP_20298944.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE150]
gi|430912931|gb|ELC34103.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE25]
gi|430925933|gb|ELC46529.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE28]
gi|431262506|gb|ELF54496.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE17]
gi|431270666|gb|ELF61828.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE18]
gi|431280876|gb|ELF71785.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE23]
gi|431502029|gb|ELH80922.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE217]
gi|431624586|gb|ELI93202.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE150]
Length = 604
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 4 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 63
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 64 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--EIRLLYIAPERL 121
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 122 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPMLPFMALT 176
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 177 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 236
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 237 YCNSRAKVEDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 296
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 297 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 351
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 352 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 393
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 394 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 453
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 454 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 505
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 506 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 539
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 540 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 597
Query: 1023 I 1023
+
Sbjct: 598 V 598
>gi|417280748|ref|ZP_12068048.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3003]
gi|386245077|gb|EII86807.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3003]
Length = 611
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 210/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L + + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWDP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|417843805|ref|ZP_12489870.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21127]
gi|341948268|gb|EGT74898.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21127]
Length = 619
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 345/651 (52%), Gaps = 81/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K VFG SFR Q E+INA ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 21 KSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFAGLTLVISPLISL 80
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ + +QQ++ +L S + KLLYV+PEKV + Q
Sbjct: 81 MKDQVDQLQANGIDADFLNSSQTLEQQQQVQNKLISG--QLKLLYVSPEKVMTNSFF--Q 136
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L S + +A IDEAHC+SQWGHDFRP+Y LG LK FP+ P++ALTATA + ++
Sbjct: 137 LISYSKVSFIA---IDEAHCISQWGHDFRPEYTQLGGLKASFPHAPIMALTATADYATRQ 193
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK------------VAERLQVGLSYGHFFLLKE 613
D++ L L N + SF+RPN+ E+ +A++ + G+ Y + E
Sbjct: 194 DILTHLNLENPHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRNKVE 253
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G AA YH ++ A R VQ+ + +D + ++ AT+AFGMGINK +VRFV H
Sbjct: 254 RIAESLRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAH 313
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
L +SIE Y+QE GRAGRD + VL+Y +D+ + Q + + P TP +
Sbjct: 314 FDLSRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWL-----QKILLEKPETPQRQIEQ 368
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+ G E+ T CRRL+ L +FGE H + C+NC
Sbjct: 369 HKLEAIGEFAESQT---------------CRRLVLLNYFGE-----HRQTPCNNCDICLD 408
Query: 791 FIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+K D A+K++ + GQ + + +++ V RG NQ + + +H+ LS++G GK +
Sbjct: 409 PPKKYDGLVDAQKVMSTIYRVGQCYGAHYVIAVLRGMHNQKIIERQHDKLSVYGIGKDKS 468
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ F+ + V ++ +L++ +S A ++ G + + L P
Sbjct: 469 KEHWQSVIRQLIHLGFVQQ------VISELNPMLQLTES-AKAILKGEEPLELAMPRISA 521
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+K++ + PQ + N L++ LR LR + +
Sbjct: 522 ISKIAHN------------------------PQRQSVANYDKDLFARLRFLRKQIADK-- 555
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + Y +F +ATLQ +++ +P + E+L+ING+G K+ ++G + I+
Sbjct: 556 ENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQ 606
>gi|165920611|ref|ZP_02219582.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii Q321]
gi|165916813|gb|EDR35417.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii Q321]
Length = 601
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 219/649 (33%), Positives = 344/649 (53%), Gaps = 77/649 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG +FRP Q +IIN+ ++G D FVLMPTGGGKSL YQ+PAL+ G+ +V+SPL+SL
Sbjct: 10 RQTFGYENFRPLQEKIINSVIAGEDNFVLMPTGGGKSLCYQIPALVREGVGIVVSPLISL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ L A + + E ++ L L+++ + LLY+ PE++ L R
Sbjct: 70 MQDQVQALNANGAAAALYNSTLTEAEARKNLARLHNN--ELDLLYIAPERLMTESFLSR- 126
Query: 506 LESLNAREL-LARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
RE+ LA + IDEAHCVSQWGHDFRP+Y LG L++ FP P +ALTATA +
Sbjct: 127 -----LREVKLALVAIDEAHCVSQWGHDFRPEYLRLGELREYFPKVPFIALTATADKQTR 181
Query: 565 EDVVQALGLVNCIIFRQSFNRPNL---WMDCEKVAERLQVGLS-----YGHFFLLKEFYV 616
+D++Q L L + SFNRPN+ ++ +K +L L +G + L V
Sbjct: 182 QDILQRLRLTKANVHIASFNRPNIRYTLLEKQKPYNQLVNFLKDRKADFGIVYCLSRNRV 241
Query: 617 VSLEC-----GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 671
+ G+ A YH + AQR Q+ + +D++NII AT+AFGMGI+KP+VRFV+
Sbjct: 242 EEVAAKLQADGYSALPYHAGLPAAQRGKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFVV 301
Query: 672 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRF 731
H+ LPK IEGY+QE GRAGRDG S +L Y D +K I G E H +
Sbjct: 302 HYDLPKHIEGYYQETGRAGRDGLPSEALLLYGLRDIAVIKSFIENGNNEIRKRIELH-KL 360
Query: 732 NVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSF 791
N M ++ E CRR + L +F E + C NC +
Sbjct: 361 NC----------------MSAFAEART-CRRRVLLNYFNESL-----TEDCGNCDICLNP 398
Query: 792 IEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
E + T A+K + V +++ +++++V RG + +K+ H+ LS +G GK L++
Sbjct: 399 PETYNGTIEAQKALSCVYRVRERYGVNYVIDVLRGKDDPRIKRAGHDRLSTYGIGKELSQ 458
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
+E + R L+ +L +++ S+L++ AH+++ G++ ++L P
Sbjct: 459 NEWYSVFRQLIHLGYLEQDLAN-------YSILRLT-PLAHSILRGKETLILAKPR---- 506
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
K ++L K ++ ++ + P + A L+ LR LR + +E+
Sbjct: 507 ----------EKYNVLKKKYKAAKANSSASPYD-------AALFEKLRELRKAIARES-- 547
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V + IF +A+L ++ R+P ++ E L ING+G+ K+ YG L I
Sbjct: 548 RVAPFIIFSDASLVEMASRLPVSDSEFLAINGVGQKKLENYGKLFLHLI 596
>gi|338211691|ref|YP_004655744.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
gi|336305510|gb|AEI48612.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
Length = 715
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 220/648 (33%), Positives = 341/648 (52%), Gaps = 73/648 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K+ FG +FRP Q EII+ +G+D VLMPTGGGKS+ YQ+PAL+ GITLVISPL++L
Sbjct: 10 KQYFGYETFRPLQAEIIDWIAAGNDCMVLMPTGGGKSVCYQVPALMKEGITLVISPLIAL 69
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L I A FL+ +EQ I ++ +S + KLLY+ PEK+ + L
Sbjct: 70 MKDQVQALRANGIEAAFLNSTQSASEQYAIEKQCHSG--ELKLLYIAPEKLFAAGSL-DF 126
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ SLN + +DE+HCVS WGHDFRP+Y L ILK FP+ P++ALTATA +
Sbjct: 127 VRSLN----INLFAVDESHCVSVWGHDFRPEYTQLHILKAAFPHVPMVALTATADRVTRR 182
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCE------KVAERL------QVGLSYGHFFLLKE 613
DV++ LG+ +F SF+RPNL ++ KV E+ Q G+ Y E
Sbjct: 183 DVLKQLGIPEARVFEASFDRPNLSLNVLPGRNRIKVIEQFINDHPNQSGIIYCLARKTTE 242
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L G A YH + P +R+ VQ + +D+I I+ AT+AFGMGI+K +VR+++H
Sbjct: 243 DIAQKLRARGINARHYHAKLPPEERSKVQDDFLRDDIQIMVATIAFGMGIDKSNVRWIMH 302
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+++P ++E ++QE GRAGRDG +S +L+YS++D+I + MI +S P H +
Sbjct: 303 YNMPGNVESFYQEIGRAGRDGLKSDTMLFYSFADWIMRRDMI------ESSELPQHLK-- 354
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L RM Y E D CRR + L +F E D + C NC ++
Sbjct: 355 --------DIQFAKLDRMKQYAEAD-HCRRRILLSYFNEAVD-----RDCGNCDVCRNPR 400
Query: 793 EK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKS 851
K D T A+K + + T Q+ + +++V RGS N+ V + ++ + GAG+ L
Sbjct: 401 TKFDATLPAQKALSAIARTDQKIAMGLLIDVLRGSHNRNVTERGYDRIKTFGAGRELRAE 460
Query: 852 EASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINST 911
E + L ++ + DV + LK+N++ L R+ ++RF S
Sbjct: 461 EWAEYLTQMLNSGVM-------DVAYDEAHSLKLNETSWQVLRGERKVELVRFESYEEKR 513
Query: 912 KLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEG 971
K + P K + EV + +L+ LR +R L E
Sbjct: 514 KRQEETAEPVK------------------TKKEV---IRDELFERLRKVRKQLADEL--N 550
Query: 972 VMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
V + +F +ATL ++++ P ++L+++G+G+ K S YG + I
Sbjct: 551 VPPFVVFSDATLSDMAEKRPINRFQMLQVSGVGETKFSHYGEAFINEI 598
>gi|421724743|ref|ZP_16163951.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca M5al]
gi|410374417|gb|EKP29090.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca M5al]
Length = 608
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/654 (31%), Positives = 337/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+ ++G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQDTIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQE++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSG--QIRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N L+ + +DEAHC+SQWGHDFRP+Y LG L+Q+ P+ P +ALTATA + +
Sbjct: 135 LTHWN----LSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPHIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLDLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGDVTLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQTPLTAGEMLSVNGVGTRKLERFGKEFMALIRAHV 603
>gi|422977416|ref|ZP_16977368.1| ATP-dependent DNA helicase recQ [Escherichia coli TA124]
gi|371593264|gb|EHN82147.1| ATP-dependent DNA helicase recQ [Escherichia coli TA124]
Length = 611
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 210/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q +++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLDVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNIRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|420338400|ref|ZP_14839955.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-315]
gi|391258280|gb|EIQ17384.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-315]
Length = 609
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQGEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ + A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTDA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|258647524|ref|ZP_05734993.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
gi|260852300|gb|EEX72169.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
Length = 607
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 226/657 (34%), Positives = 348/657 (52%), Gaps = 79/657 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
KK FG FRP Q +I+ T++G D VLMPTGGGKS+ +QLPAL+ PG+TLV+SPL+SL
Sbjct: 9 KKYFGYSDFRPLQEDIVATTLAGIDSLVLMPTGGGKSICFQLPALLLPGVTLVVSPLISL 68
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+QDQ+ +L +A IPA L+ N EQ + R + KLLY+ PE V K +
Sbjct: 69 MQDQVENLREAGIPACALNSNQTADEQLRLRRACLDG--RVKLLYMAPETVFK------E 120
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ L A ++ + IDEAHCVSQWGHDFRP+Y LG L++ F + P +ALTATA ++
Sbjct: 121 LDQLLAALPISLVAIDEAHCVSQWGHDFRPEYVQLGTLRKAFGSAPFMALTATADEVTRQ 180
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEK---VAERLQ-----VGLSYGHFFLL------ 611
D+ + L L + +F SF+RPNL ++ + AE+L+ +G+ G ++
Sbjct: 181 DIRERLNLHSPRVFISSFDRPNLSLNVFRGLNGAEKLKAINRFLGMRAGESGIVYCLSRK 240
Query: 612 -KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
E LE G A YH + +R Q+ + D++ ++ AT+AFGMGI+K +VR+
Sbjct: 241 TTEQLAEKLEALGVSARPYHAGLSADKRRETQQAFIADQLRVVVATIAFGMGIDKSNVRW 300
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
VIH++LPKSIE Y+QE GRAGRDG + +L+Y+Y+D ++++
Sbjct: 301 VIHYNLPKSIESYYQEIGRAGRDGDPADTLLFYNYADIVQLEKF---------------- 344
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
A + E N E L RM Y E++V CRR + L +FGE C NC K
Sbjct: 345 ----ARESHLREINLERLDRMREYAESNV-CRRRILLNYFGEV-----SAADCGNCDVCK 394
Query: 790 SFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
S E+ D T A+ + + +G++ S ++++ R + VK+ ++ L G G+ L
Sbjct: 395 SPPERFDGTREAQMALSAIVRSGERISMPVVVDILRAVYSPAVKEGGYDRLKTFGVGRAL 454
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSK-AHNLIIGRQNVVL---RF 904
+ + D+L++ ++ + L + ++ +++ GR ++L R
Sbjct: 455 SAA---------TWRDYLLQCLQMGLFTINYVDQLHLQVTELGRDVLYGRSAIMLAVYRP 505
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
P + PAK + S S + Q EVD NL +L++ LR L
Sbjct: 506 PERVEK---------PAKKKGRKSRASQSADVETDLQQMEVDKNLFERLHA----LRLEL 552
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
+ +G Y I + TL+ L+ P+T +EL I+GIG+ K KYG L+ I +
Sbjct: 553 ANK--QGYPPYIIMSDRTLRLLATIRPKTLDELSNISGIGEYKRDKYGPAFLKVINA 607
>gi|222109326|ref|YP_002551590.1| ATP-dependent DNA helicase recq [Acidovorax ebreus TPSY]
gi|221728770|gb|ACM31590.1| ATP-dependent DNA helicase RecQ [Acidovorax ebreus TPSY]
Length = 623
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 219/652 (33%), Positives = 331/652 (50%), Gaps = 72/652 (11%)
Query: 388 VFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALI----CPGITLVISPLV 443
VFG FR Q+ II+ ++G D VLMPTGGGKSL YQ+PA++ G+T+V+SPL+
Sbjct: 11 VFGYEQFRGPQQAIIDHVIAGGDALVLMPTGGGKSLCYQVPAIVRRDAGLGVTVVVSPLI 70
Query: 444 SLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLL 503
+L+ DQ+ L +A + A FL+ ++W + Q++ R L + LLY PE+V +D L
Sbjct: 71 ALMHDQVGALHEAGVEAAFLNSTLDWQQTQDVERRLARG--EITLLYAAPERV-TTDRFL 127
Query: 504 RQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASV 563
L+ L+AR L IDEAHCVSQWGHDFRP+Y+ L +L +++ P +ALTATA A
Sbjct: 128 TLLDGLHARGQLGLFAIDEAHCVSQWGHDFRPEYRQLAVLHERYAGVPRIALTATADALT 187
Query: 564 KEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERL-------------QVGLSYGHFF- 609
+ED+VQ L L F SF+RPN+ E+ E L + G+ Y
Sbjct: 188 REDIVQGLRLQQARQFVSSFDRPNIRYRIEEKKEPLTQLMRFIDREHLGEAGVVYCQSRK 247
Query: 610 LLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRF 669
++E + G A YH + R Q ++ +++ ++ AT+AFGMGI+KPDVRF
Sbjct: 248 RVEELAQALCDAGLTALPYHAGLPAEVRQQNQDRFLREDGIVMVATIAFGMGIDKPDVRF 307
Query: 670 VIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN 729
V H +PK+IEGY+QE GRAGRDG + + Y D + + MI + +P
Sbjct: 308 VAHVDMPKNIEGYYQETGRAGRDGLPADAWMAYGLQDVVNQRRMIDE--------SPAGE 359
Query: 730 RFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIK 789
F G++ DCRR+ L +FGE S C CDNC
Sbjct: 360 EFKAVMRGKLDALLALA---------EATDCRRVRLLGYFGEA--SEPC-GNCDNCLNPP 407
Query: 790 SFIEKDVTDTAKKLVELV----KLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAG 845
+ D TD A+KL+ + + +G F + HI+++ RG V++ HE LS G G
Sbjct: 408 AVW--DGTDAARKLLSTIYRVHEASGLTFGTGHIMDILRGKATDKVQQFGHEKLSTFGLG 465
Query: 846 KHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFP 905
++++ +LR L+ + + K G S + ++ G Q+V+LR
Sbjct: 466 AQYSEAQLRGVLRQLLAAGAV--GLHKVTTEGGHSFDTLALTEGSRPVLRGEQSVLLREA 523
Query: 906 SAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKL-YSSLRMLRTLL 964
+A +G P R P P +L A++ + +L+ R +
Sbjct: 524 TAA------------------AGPKKPRRASAP--PVAAANLGQDAQVRFINLKAWRAEV 563
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLL 1016
+E + AY IF +ATL +++R P T E+L I+G+G K+ YG +L
Sbjct: 564 ARE--HNLPAYVIFHDATLAAIAERNPATLEDLQGISGMGAKKLEAYGAEVL 613
>gi|392969325|ref|ZP_10334740.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
gi|387841519|emb|CCH56798.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
Length = 736
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 216/655 (32%), Positives = 344/655 (52%), Gaps = 72/655 (10%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K++FG FR +Q II++ ++G + FV+MPTG GKSL YQLPA++ G +VISPL++L
Sbjct: 17 KEIFGYSQFRGDQEAIIHSILAGRNTFVIMPTGAGKSLCYQLPAIVSDGTAIVISPLIAL 76
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
+++Q+ L I A FL+ + E ++ ++ S KLLY+ PE + K + L
Sbjct: 77 MKNQVDQLNAFGINAQFLNSTLSKAEMNKVKKDTLSG--SLKLLYIAPESLTKEENL--- 131
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
+ ++ + IDEAHC+S+WGHDFRP+Y+ + + N PV+ALTATAT V++
Sbjct: 132 --DFLKKANISFVAIDEAHCISEWGHDFRPEYRKIRGIVDNIGNLPVIALTATATPKVQQ 189
Query: 566 DVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFFLLKEFYVV 617
D+ + L + + +++ SFNR NL+ + + + + + Y G + L V
Sbjct: 190 DIQKNLQMEDANLYKSSFNRKNLYYEIKPKIDAKKQLIKYVKQNKGKSGIVYCLSRKTVE 249
Query: 618 SLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
+ KA YH +DP R Q + +E+++I AT+AFGMGI+KPDVRFVIH
Sbjct: 250 DIAELLNVNDIKALPYHAGLDPLTRMNNQDAFLNEEVDVIVATIAFGMGIDKPDVRFVIH 309
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFN 732
+ PKS+EGY+QE GRAGRDG +CV++YSY D ++++ + P T N +
Sbjct: 310 YDAPKSLEGYYQETGRAGRDGLEGNCVMFYSYDDIVKLEKF-----NKDKPVTERDNAKH 364
Query: 733 VANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFI 792
+ L MVSY V CRR L +FGE D C CDNC +KS
Sbjct: 365 L-------------LTEMVSYANLGV-CRRRQLLSYFGEFLDK-DC-GFCDNC--LKSTE 406
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D ++ V T Q+F +H+ +V + NQY+ + H L ++G G+ ++
Sbjct: 407 KFKAQDEVVLALQSVLQTDQRFDVAHLADVLTATDNQYITSYEHNRLEVYGKGREFNETS 466
Query: 853 A--SRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
+L+ + I ++ ++V D YG VLK+ Q + N I P I+
Sbjct: 467 EFWCSLLKQITIYGYIEKDV---DNYG----VLKLTQ-RGLNYI--------EDPYPISL 510
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGE 970
+K D A+ G+ ++ P+ N D +L L+ LR + KE +
Sbjct: 511 SKDHHYDQQVAE-----GREDEDKDVAPTAGGNAYD----EELLGLLKALRKKVAKE--K 559
Query: 971 GVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
G+ Y IF + +++ ++ P T EE+ +ING+G KV K+G ++ I ++E
Sbjct: 560 GLPPYVIFQDPSMEEMATTYPTTREEMAQINGVGMGKVQKFGRPFIDLITKYVEE 614
>gi|432619136|ref|ZP_19855233.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE75]
gi|431150651|gb|ELE51701.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE75]
Length = 604
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 210/661 (31%), Positives = 345/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 4 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 63
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 64 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 121
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 122 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 176
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 177 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 236
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 237 YCNSRAKVEDTAARLQSKGISAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMGIN 296
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 297 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 351
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 352 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 393
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 394 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 453
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 454 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 505
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 506 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 539
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 540 SIADES--NVPPYVVFNDATLIEMAEQMPISASEMLSVNGVGMRKLERFGKPFMALIRAH 597
Query: 1023 I 1023
+
Sbjct: 598 V 598
>gi|422015295|ref|ZP_16361894.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
gi|414099460|gb|EKT61101.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
Length = 608
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 221/657 (33%), Positives = 342/657 (52%), Gaps = 89/657 (13%)
Query: 389 FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 448
FG SFRP Q +I A + D VLMPTGGGKSL YQ+PAL+ G+TLV+SPL+SL++D
Sbjct: 21 FGYQSFRPGQEAVIRAILDNRDSLVLMPTGGGKSLCYQVPALVKDGVTLVVSPLISLMKD 80
Query: 449 QIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCK---YKLLYVTPEKVAKSDVLLRQ 505
Q+ L I A L+ + EQ+E++ D C KLLYV PE++ +D L Q
Sbjct: 81 QVDQLRLHGINAACLNSSQTPQEQREVM-----DSCAQGNLKLLYVAPERLL-TDYFLSQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + N +A + +DEAHC+SQWGHDFRP+Y+ LG L+Q FP+ PV+ALTATA + +
Sbjct: 135 LANWN----IALLAVDEAHCISQWGHDFRPEYRALGQLRQHFPDVPVMALTATADETTRA 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+++ L L N ++ SF+RPN LW + A++ + G+ Y +
Sbjct: 191 DIIRLLALDNPLVQVSSFDRPNIRYTLVEKYKPLEQLWFFIK--AQKGKAGIVYCNSRNK 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D QR +VQ + KD + I+ ATVAFGMGINK +VRFV
Sbjct: 249 VEETAERLQKRGLSVAAYHAGLDSQQREWVQDAFLKDNLQIVVATVAFGMGINKSNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 309 AHFDIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMAWLRRCL-----EEKP------- 356
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKS 790
+G + L + ++ E CRRL+ L +FGE + C CD C +
Sbjct: 357 -----AGVQQDIERHKLNAIAAFAEAQT-CRRLVLLNYFGENRQTP-C-GNCDIC--LDP 406
Query: 791 FIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAK 850
+ D A+K + + GQ+F +I+ V RG+ NQ ++ H+ L ++G GK
Sbjct: 407 PKQYDGLVDAQKALSCIYRVGQRFGIGYIVGVLRGANNQRIRDLGHDKLPVYGLGKEQTN 466
Query: 851 SEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINS 910
+LR L+ + + + S S L++ ++ A ++ G ++ L P +
Sbjct: 467 EHWVSVLRQLIHLGMITQNI-------SHFSALQLTEA-ARPILRGESSLRLAVPRVL-- 516
Query: 911 TKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEV-DLNLSAKLYSSLRMLRTLLVKEAG 969
++ SRN QN+V N KL++ LR LR + E
Sbjct: 517 -------------------VTKSRNQ-----QNKVYRGNYDKKLFAKLRKLRKSIADE-- 550
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
+ + + +F +ATL +++ P + ELL ING+G+ K+ ++G + I ++ +
Sbjct: 551 DNIPPFVVFNDATLIEMAEHCPTSPAELLLINGVGERKLERFGDAFMALIRDHLEGY 607
>gi|157157237|ref|YP_001465308.1| ATP-dependent DNA helicase RecQ [Escherichia coli E24377A]
gi|157079267|gb|ABV18975.1| ATP-dependent DNA helicase RecQ [Escherichia coli E24377A]
Length = 609
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVAERLQV-----------GLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK Q+ G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKPLDQLMRYVQEQCGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|194429200|ref|ZP_03061728.1| ATP-dependent DNA helicase RecQ [Escherichia coli B171]
gi|300923326|ref|ZP_07139374.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 182-1]
gi|194412712|gb|EDX29006.1| ATP-dependent DNA helicase RecQ [Escherichia coli B171]
gi|300420412|gb|EFK03723.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 182-1]
Length = 611
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 210/661 (31%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 11 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 70
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 71 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIRLLYIAPERL 128
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 129 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 183
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 184 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 243
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G A YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 244 YCNSRAKVEDTAARLQSKGISAVAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 303
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 304 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 358
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 359 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 400
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 401 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 460
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 461 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 512
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 513 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 546
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 547 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 604
Query: 1023 I 1023
+
Sbjct: 605 V 605
>gi|455737381|ref|YP_007503647.1| ATP-dependent DNA helicase RecQ [Morganella morganii subsp. morganii
KT]
gi|455418944|gb|AGG29274.1| ATP-dependent DNA helicase RecQ [Morganella morganii subsp. morganii
KT]
Length = 608
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 213/658 (32%), Positives = 338/658 (51%), Gaps = 86/658 (13%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++VFG FR Q +II+ G D V+MPTGGGKSL YQ+PAL+ PG+T+V+SPL+SL
Sbjct: 18 RQVFGYQQFRAGQSDIIDTVTGGRDCLVVMPTGGGKSLCYQIPALMLPGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ L + A +L+ EQQ++L +++ + KLLYV PE++ S +RQ
Sbjct: 78 MKDQVDQLRLLGVEAGYLNSAQTAQEQQKVLEGCHNN--RIKLLYVAPERLLMSS-FIRQ 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L+ LLA +DEAHC+SQWGHDFRP+Y +G L+Q P PV+ALTATA + +
Sbjct: 135 LQQWQP-SLLA---VDEAHCISQWGHDFRPEYCAIGELRQHLPGVPVIALTATADNTTRS 190
Query: 566 DVVQALGLVNCIIFRQSFNRPN--------------LWMDCEKVAERLQVGLSYGHFFLL 611
D+ L L + +I SF+RPN LWM ++ Q G+ Y +
Sbjct: 191 DICSRLRLSDPLIHISSFDRPNIRYTLVEKYKAFDQLWMFVR--GQKGQCGIIYCNSRNK 248
Query: 612 KEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFV 670
E L+ G A YH +D +QR +VQ + KD + ++ ATVAFGMGINK +VRFV
Sbjct: 249 VEDVAARLQKRGLSVAAYHAGLDNSQREWVQDAFLKDNLQVVVATVAFGMGINKSNVRFV 308
Query: 671 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNR 730
H +P++IE Y+QE GRAGRDG + VL+Y +D ++ + ++ P P +
Sbjct: 309 AHFDIPRNIESYYQETGRAGRDGVSAEAVLFYDPADMAWLRRCL-----DEKPAGPQKD- 362
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDS--AHCKKTCDNCSKI 788
+E + N + + + CRRL+ L +FGE + +C D +
Sbjct: 363 ---------IEQHKLNAMGAFAQAQT---CRRLVLLNYFGENRQTPCGNCDICLDPPKQY 410
Query: 789 KSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHL 848
+E A++ + + GQ+F +I++V RGS NQ ++++ H+ L+++G GK
Sbjct: 411 DGLVE------AQQALSCIYRAGQRFGLGYIVDVLRGSNNQRIREYGHDKLAVYGIGKDK 464
Query: 849 AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAI 908
++ +LR L+ + + + S L++ +S A ++ G + L P
Sbjct: 465 SQEHWVSVLRQLIHLGLITQNIAN-------YSALQLTES-ARPVLRGEVPLQLAVPRI- 515
Query: 909 NSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEA 968
+N P Q N KL++ LR LR + E
Sbjct: 516 -------------------------QNIKPRQTARSYGGNYDKKLFAKLRKLRKSIADE- 549
Query: 969 GEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF 1026
E + + +F +ATL ++++ P +LL ING+G+ K+ ++G + I + F
Sbjct: 550 -ENIPPFVVFNDATLIEMAEQCPVRANDLLLINGVGERKLERFGDAFMALIREHLTGF 606
>gi|397655279|ref|YP_006495981.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca E718]
gi|394344006|gb|AFN30127.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca E718]
Length = 608
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 336/654 (51%), Gaps = 84/654 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
++ FG FRP Q II+ ++G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL
Sbjct: 18 QETFGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISL 77
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL + A L+ +QQ+++ S + +LLY+ PE++ D L
Sbjct: 78 MKDQVDQLLANGVAAACLNSTQSREQQQDVMAGCRSG--QIRLLYIAPERLM-LDNFLEH 134
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L N L+ + +DEAHC+SQWGHDFRP+Y LG L+Q+ P P +ALTATA + +
Sbjct: 135 LTHWN----LSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPQIPFMALTATADDTTRR 190
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKE 613
D+V+ L L + +I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 191 DIVRLLDLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGIIYCNSRSKVE 250
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 251 DTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P P + R
Sbjct: 311 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKPAGPLQDIER 365
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E T CRRL+ L +FGE ++ C NC +
Sbjct: 366 HKLNAMGAFAEAQT---------------CRRLVLLNYFGEGR-----QEPCGNCDICLD 405
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G G+ +
Sbjct: 406 PPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQS 465
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
++R L+ + + + + S L++ ++ A ++ G + L P +
Sbjct: 466 HEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGDVTLQLAVPRIVA 517
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
P Q N KL++ LR LR + E
Sbjct: 518 L--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRKAIADE-- 549
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTI 1023
E + Y +F +ATL ++++ P T E+L +NG+G K+ ++G + I + +
Sbjct: 550 ENIPPYVVFNDATLIEMAEQTPLTAGEMLSVNGVGTRKLERFGKEFMALIRAHV 603
>gi|417626000|ref|ZP_12276288.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_H.1.8]
gi|345372046|gb|EGX04013.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_H.1.8]
Length = 609
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q EII+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 9 LESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLT 68
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ L + A L+ +Q E++ + + LLY+ PE++
Sbjct: 69 VVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTG--QIHLLYIAPERL 126
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 127 M-LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALT 181
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + ++D+V+ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 182 ATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 241
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 242 YCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGIN 301
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 302 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 356
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 357 ------------QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 398
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ + H+ L ++
Sbjct: 399 NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVY 458
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ + + + + S L++ ++ A ++ G ++ L
Sbjct: 459 GMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ-------HSALQLTEA-ARPVLRGESSLQL 510
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
P + P Q N KL++ LR LR
Sbjct: 511 AVPRIVAL--------------------------KPKAMQKSFGGNYDRKLFAKLRKLRK 544
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E+ V Y +F +ATL +++++P T E+L +NG+G K+ ++G + I +
Sbjct: 545 SIADES--NVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAH 602
Query: 1023 I 1023
+
Sbjct: 603 V 603
>gi|347536603|ref|YP_004844028.1| ATP-dependent DNA helicase RecQ [Flavobacterium branchiophilum FL-15]
gi|345529761|emb|CCB69791.1| ATP-dependent DNA helicase RecQ3 [Flavobacterium branchiophilum
FL-15]
Length = 702
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 222/655 (33%), Positives = 332/655 (50%), Gaps = 81/655 (12%)
Query: 378 TKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITL 437
T L+ K FG +FRPNQ II + ++G D +MPTGGGKS+ +QLPALI G+T+
Sbjct: 3 TITLKQKLKDHFGFENFRPNQEAIIQSVLNGQDTVAIMPTGGGKSICFQLPALIFQGLTI 62
Query: 438 VISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVA 497
V+SPL++L++DQ+ L I A F++ + + EQ L ++++ KL+YV PE
Sbjct: 63 VVSPLIALMKDQVDSLKANGINACFINSSQQAMEQHYYLEQIHNG--NIKLVYVAPES-- 118
Query: 498 KSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTA 557
L LE L A ++ I IDEAHC+S WGHDFRP Y LG LK KF NTP+LALTA
Sbjct: 119 -----LNYLEPLFASIQVSLIAIDEAHCISAWGHDFRPAYCNLGYLKNKFANTPILALTA 173
Query: 558 TATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSY--------GHFF 609
TA + ++D+ L L N +F SF+R NL ++ +R++ + + G +
Sbjct: 174 TADKATRQDICDQLNLQNPHVFVASFDRKNLSLEVRPALDRVKQIVQFIDKKADEAGIIY 233
Query: 610 LLKEFYVVSLE-----CGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINK 664
L L G A YH +D R VQ + D ++CATVAFGMGI+K
Sbjct: 234 CLSRKTTEELSEKLQSKGISAMAYHAGLDNHNRTKVQDAFINDTCQVVCATVAFGMGIDK 293
Query: 665 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPF 724
+VR+VIH++LPK+IEGY+QE GRAGRDGQ + +L+ SY D I+++
Sbjct: 294 SNVRWVIHYNLPKNIEGYYQEIGRAGRDGQPAETILFQSYGDVIQLQKF----------- 342
Query: 725 TPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDN 784
A + E L RM + + CRR + L +FGE S +C CD
Sbjct: 343 ---------ALEAQNAEIQLAKLDRMKQFADAQ-SCRRKILLSYFGE-LVSENC-GNCDV 390
Query: 785 CSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGA 844
C +FI D T A+K + + + +++ +GS N + ++ L +G
Sbjct: 391 CKNPPAFI--DGTIIAQKALSAIYRLKESEPIGVVVDFLKGSKNANIYDKSYQNLKTYGV 448
Query: 845 GKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRF 904
G +A + S+ L LV + ++ ++ LK+ S A N++ + V+L
Sbjct: 449 GADIAWFDWSQYLIQLV-------NLGYCEIAFHQNNQLKLT-SNAKNVLFENEKVLL-- 498
Query: 905 PSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLL 964
++V K K + T +Q L+ LR LRT L
Sbjct: 499 -----------TNVQKVKFETPKSKEKAVKKITNTQ-----------SLFDILRKLRTDL 536
Query: 965 VKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETI 1019
+E E + AY +F +ATL+ + P ++E L I+G+G+AK+ KYG +E I
Sbjct: 537 AQE--ESIPAYAVFNDATLRQIEAERPMSDESFLAIDGVGRAKLEKYGTMFIEAI 589
>gi|260913220|ref|ZP_05919702.1| ATP-dependent helicase RecQ [Pasteurella dagmatis ATCC 43325]
gi|260632807|gb|EEX50976.1| ATP-dependent helicase RecQ [Pasteurella dagmatis ATCC 43325]
Length = 631
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 339/651 (52%), Gaps = 82/651 (12%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
+ FG SFR Q E+I + ++G D V+M TG GKSL YQ+PAL G+TLVISPL+SL
Sbjct: 31 QSTFGYQSFRKGQEEVIESALAGKDSLVIMATGNGKSLCYQIPALCFDGLTLVISPLISL 90
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQ 505
++DQ+ LL I A +L+ + + EQQ + ++ S KLLYV+PEKV +
Sbjct: 91 MKDQVDQLLANGIEADYLNSSQTFAEQQNVHSKVMSG--TLKLLYVSPEKVMTNSFF--- 145
Query: 506 LESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKE 565
L + ++ I IDEAHC+SQWGHDFRP+Y LG LK FPN P++ALTATA + ++
Sbjct: 146 --HLISHCKVSFIAIDEAHCISQWGHDFRPEYTQLGGLKHAFPNAPIMALTATADHATRQ 203
Query: 566 DVVQALGLVNCIIFRQSFNRPNL-WMDCEK-----------VAERLQVGLSYGHFFLLKE 613
D++ L L I+ SF+RPN+ + EK + ++ + G+ Y + E
Sbjct: 204 DILVHLKLEQPYIYIGSFDRPNIRYTLIEKYKPMEQLCRFVLGQKGKSGIIYCNSRNKVE 263
Query: 614 FYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIH 672
SL G KA YH ++ QR VQ+ + +D++ ++ AT+AFGMGINK +VRFV H
Sbjct: 264 RVAESLRNKGVKAQAYHAGMETTQREDVQRAFQRDDLQVVVATIAFGMGINKSNVRFVAH 323
Query: 673 HSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHN--R 730
LP+SIE Y+QE GRAGRD + VL+Y +D+ + ++ + P TP
Sbjct: 324 FDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILF-----EKPETPQRQIEE 378
Query: 731 FNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IK 789
+ G E+ T CRRL+ L +FGE H ++ C NC +
Sbjct: 379 LKLQAIGEFAESQT---------------CRRLVLLNYFGE-----HRQQPCQNCDICLD 418
Query: 790 SFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLA 849
+ D A+K++ + GQ+F +I+ V RG NQ +K H+H+ L+++G GK +
Sbjct: 419 PPKQYDGLIDAQKVMSTIYRVGQRFGIHYIVAVLRGLSNQKIKDHQHDELTVYGIGKDKS 478
Query: 850 KSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAIN 909
K ++R L+ + + V+ ++ L++ +S A + G + + L P
Sbjct: 479 KEHWQSVIRQLIHLGLIKQ------VFDHFNTTLQLTES-AKPFLRGEKPLSLAMP---- 527
Query: 910 STKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAG 969
+LS A PQ + L++ LR LR + +
Sbjct: 528 --RLSSLHAITA-------------------PQKSAVQHYDKDLFARLRFLRKQIADK-- 564
Query: 970 EGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIE 1020
E + +Y +F +ATLQ +++ P + E+L+ING+G K+ ++ + I+
Sbjct: 565 ENIPSYIVFNDATLQEMAQYQPTSNIEMLQINGVGSIKLERFAQPFIALIQ 615
>gi|345301389|ref|YP_004830747.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
gi|345095326|gb|AEN66962.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
Length = 630
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 211/649 (32%), Positives = 335/649 (51%), Gaps = 80/649 (12%)
Query: 387 KVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLI 446
+ FG FRP Q II+ + G D V+MPTGGGKSL YQ+PAL+ G+T+V+SPL+SL+
Sbjct: 40 ETFGYQQFRPGQETIIDTVLGGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLM 99
Query: 447 QDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQL 506
+DQ+ LL + A L+ +Q E++ + + +LLY+ PE++ D L L
Sbjct: 100 KDQVDQLLANGVAAACLNSTQTREQQLEVMAGCRTG--QIRLLYIAPERLM-LDNFLEHL 156
Query: 507 ESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKED 566
N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALTATA + + D
Sbjct: 157 AHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMALTATADDTTRLD 212
Query: 567 VVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLSYGHFFLLKEF 614
+V+ LGL + I SF+RPN+ +M EK +R + G+ Y + E
Sbjct: 213 IVRLLGLNDPFIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGIIYCNSRAKVED 272
Query: 615 YVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 673
L+ G AA YH ++ RA VQ+++ +D++ I+ ATVAFGMGINKP+VRFV+H
Sbjct: 273 TAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 332
Query: 674 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNV 733
+P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 333 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP---------- 377
Query: 734 ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSK-IKSFI 792
G++ + L M ++ E CRRL+ L +FGE +++C NC +
Sbjct: 378 --QGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QESCGNCDICLDPPK 429
Query: 793 EKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSE 852
+ D A+K + + Q+F +++EV RG+ NQ ++ H+ L ++G GK +
Sbjct: 430 QYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEH 489
Query: 853 ASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTK 912
I+R L+ F + + + S L++ ++ A ++ G + L P I
Sbjct: 490 WVSIIRQLIHLGFATQNIAQ-------HSALQLTEA-ARPVLRGDVELKLAVPRVIAL-- 539
Query: 913 LSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGV 972
P Q N KL++ LR LR + E E +
Sbjct: 540 ------------------------KPRVMQKSYGGNYDRKLFAKLRKLRKAIADE--ENI 573
Query: 973 MAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIES 1021
Y +F +ATL +++++P + E+L +NG+G K+ ++G + I S
Sbjct: 574 PPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIRS 622
>gi|150004558|ref|YP_001299302.1| ATP-dependent DNA helicase [Bacteroides vulgatus ATCC 8482]
gi|294776076|ref|ZP_06741571.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|423312434|ref|ZP_17290371.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149932982|gb|ABR39680.1| putative ATP-dependent DNA helicase [Bacteroides vulgatus ATCC 8482]
gi|294450068|gb|EFG18573.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|392688918|gb|EIY82202.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 605
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 216/659 (32%), Positives = 347/659 (52%), Gaps = 78/659 (11%)
Query: 386 KKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 445
K FG SFRP Q++II ++ D VLMPTGGGKS+ YQLPAL+ G +V+SPL+SL
Sbjct: 6 KNYFGYDSFRPLQQDIIQNILAQKDTLVLMPTGGGKSICYQLPALLMEGTAIVVSPLISL 65
Query: 446 IQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV-AKSDVLLR 504
++DQ+ L I A L+ + TE + RE K KLLY++PE++ +++ LL+
Sbjct: 66 MKDQVESLQANGIAARALNSSNNETENINLRRECLQG--KIKLLYISPERLLIETNFLLK 123
Query: 505 QLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVK 564
++ ++ IDEAHC+SQWGHDFRP+Y L +L+ +FP P++ALTATA +
Sbjct: 124 DIQ-------ISLFAIDEAHCISQWGHDFRPEYTQLKVLRNQFPKVPIVALTATADKITR 176
Query: 565 EDVVQALGLVNCIIFRQSFNRPNLWMDCEK---VAERLQVGLSY--------GHFFLL-- 611
+D+VQ L L + IF SF+RPNL ++ ++ ++++ L + G + +
Sbjct: 177 KDIVQQLALKDPKIFISSFDRPNLSLEVKRGYQQKDKMRTILEFIEKHKNECGIIYCMSR 236
Query: 612 ---KEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVR 668
+ + ++ G +A YH + R Q + D + ++CAT+AFGMGI+K +VR
Sbjct: 237 SKTENVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRVQVVCATIAFGMGIDKSNVR 296
Query: 669 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGH 728
+VIH++LPKSIE ++QE GRAGRDG S +L+YS D + M+S+ E S
Sbjct: 297 WVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDLV----MLSKFATESSQ----- 347
Query: 729 NRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKI 788
E N E L RM Y E+D+ CRR + L +FGE D C NC
Sbjct: 348 -----------QEINLEKLHRMQQYAESDI-CRRRILLNYFGETMDH-----DCGNCDVC 390
Query: 789 KSFIEK-DVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKH 847
++ E+ D T +K + + T QQ + ++++ +GS NQ + ++ L + AG+
Sbjct: 391 RNPPERFDGTIIVQKALSAIARTNQQIGTHMLIDILKGSANQELIDKGYDKLKTYAAGRD 450
Query: 848 L-AKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS 906
+ A+ +L+ L + F ++ + ++ LK+ +S ++ G+++ +L
Sbjct: 451 IPARDWQDYLLQMLNLGYF--------EIAYNENNHLKITES-GQKVLFGKESAML---- 497
Query: 907 AINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVK 966
+ + + PAK TP NE + L+ LR+LR L
Sbjct: 498 ----VVIKREEFVPAKEKRKKKAKEEVLFPTPVTFGNE-----NKDLFEELRILRKKLAD 548
Query: 967 EAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKE 1025
+ + + AY + + TL ++ + P T E INGIG+ K KYG +E I+ +K+
Sbjct: 549 Q--QAIPAYIVLSDKTLHLIATQQPTTIEAFGNINGIGEYKKEKYGKEFIELIKKVLKK 605
>gi|378957075|ref|YP_005214562.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357207686|gb|AET55732.1| ATP-dependent DNA helicase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
Length = 615
Score = 333 bits (855), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 213/661 (32%), Positives = 346/661 (52%), Gaps = 84/661 (12%)
Query: 381 LEANNKKV----FGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGIT 436
LE+ K+V FG FRP Q II+ +SG D V+MPTGGGKSL YQ+PAL+ G+T
Sbjct: 15 LESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLT 74
Query: 437 LVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKV 496
+V+SPL+SL++DQ+ LL + A L+ +Q E++ + + +LLY+ PE++
Sbjct: 75 VVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG--QIRLLYIAPERL 132
Query: 497 AKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALT 556
D L L N + +DEAHC+SQWGHDFRP+Y LG L+Q+FP P +ALT
Sbjct: 133 M-LDNFLDHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALT 187
Query: 557 ATATASVKEDVVQALGLVNCIIFRQSFNRPNL-WMDCEKVA-----------ERLQVGLS 604
ATA + + D+++ LGL + +I SF+RPN+ +M EK +R + G+
Sbjct: 188 ATADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGII 247
Query: 605 YGHFFLLKEFYVVSLEC-GHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGIN 663
Y + E L+ G AA YH ++ A RA VQ+++ +D++ I+ ATVAFGMGIN
Sbjct: 248 YCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGIN 307
Query: 664 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSP 723
KP+VRFV+H +P++IE Y+QE GRAGRDG + +L+Y +D ++ + E+ P
Sbjct: 308 KPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL-----EEKP 362
Query: 724 FTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCD 783
+G++ + L M ++ E CRRL+ L +FGE ++ C
Sbjct: 363 ------------AGQLQDIERHKLNAMGAFAEAQT-CRRLVLLNYFGEGR-----QEPCG 404
Query: 784 NCSK-IKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLH 842
NC + + D + A+ + + Q+F +++EV RG+ NQ ++ ++ L ++
Sbjct: 405 NCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGYDKLKVY 464
Query: 843 GAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVL 902
G G+ + ++R L+ +M+ + + S L++ + L R +V L
Sbjct: 465 GMGREKSHEHWVSVIRQLIHLGLVMQNIAQ-------HSALQLTDAARPVL---RGDVPL 514
Query: 903 RFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRT 962
KL+ + K P Q N KL++ LR LR
Sbjct: 515 ---------KLAVPRIVALK---------------PRVMQKSFGGNYDRKLFAKLRKLRK 550
Query: 963 LLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIEST 1022
+ E E + Y +F +ATL +++++P + E+L +NG+G K+ ++G + I +
Sbjct: 551 AIADE--ENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAH 608
Query: 1023 I 1023
+
Sbjct: 609 V 609
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,820,812,141
Number of Sequences: 23463169
Number of extensions: 759254440
Number of successful extensions: 2436184
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18304
Number of HSP's successfully gapped in prelim test: 5171
Number of HSP's that attempted gapping in prelim test: 2372310
Number of HSP's gapped (non-prelim): 45179
length of query: 1136
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 982
effective length of database: 8,745,867,341
effective search space: 8588441728862
effective search space used: 8588441728862
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.6 bits)