Your job contains 1 sequence.
>001162
MELEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATS
SSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAA
ILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVKKH
EDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVAFINPETAENVSLC
SLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSVAK
GHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLELD
NKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEAVYQFENKKGLECLL
HTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGALENKTKAR
ELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTV
KERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPG
SGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVI
FDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLE
KIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYD
LEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGR
SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA
ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV
TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI
LKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNEPGKMPV
ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAKGKRATLA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001162
(1134 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159557 - symbol:PEX1 "peroxisome 1" species:3... 3336 0. 1
DICTYBASE|DDB_G0289867 - symbol:pex1 "peroxisomal biogene... 830 1.7e-123 5
UNIPROTKB|E1BPU3 - symbol:PEX1 "Uncharacterized protein" ... 896 1.7e-114 4
UNIPROTKB|E2RLT2 - symbol:PEX1 "Uncharacterized protein" ... 881 8.1e-114 4
UNIPROTKB|E1BY08 - symbol:PEX1 "Uncharacterized protein" ... 878 8.5e-114 4
RGD|1559939 - symbol:Pex1 "peroxisomal biogenesis factor ... 899 1.7e-113 3
MGI|MGI:1918632 - symbol:Pex1 "peroxisomal biogenesis fac... 890 2.3e-113 3
UNIPROTKB|O43933 - symbol:PEX1 "Peroxisome biogenesis fac... 899 1.9e-112 3
UNIPROTKB|E2RCK9 - symbol:PEX1 "Uncharacterized protein" ... 881 2.0e-110 4
ZFIN|ZDB-GENE-070530-1 - symbol:pex1 "peroxisome biogenes... 875 2.4e-108 3
UNIPROTKB|I3LPI5 - symbol:PEX1 "Uncharacterized protein" ... 852 9.3e-108 4
CGD|CAL0002247 - symbol:PEX1 species:5476 "Candida albica... 845 9.2e-107 3
UNIPROTKB|Q5AH73 - symbol:PEX1 "Likely peroxisomal biogen... 845 9.2e-107 3
UNIPROTKB|E9PE75 - symbol:PEX1 "Peroxisome biogenesis fac... 899 3.4e-97 3
UNIPROTKB|G4MQP9 - symbol:MGG_09299 "Peroxisome biosynthe... 778 5.8e-96 6
ASPGD|ASPL0000002697 - symbol:pexA species:162425 "Emeric... 765 4.2e-91 5
FB|FBgn0013563 - symbol:Pex1 "Peroxin 1" species:7227 "Dr... 740 9.2e-88 3
SGD|S000001680 - symbol:PEX1 "AAA-peroxin" species:4932 "... 721 8.2e-82 3
POMBASE|SPCC553.03 - symbol:pex1 "AAA family ATPase Pex1 ... 687 1.4e-79 2
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 704 3.9e-75 4
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 704 3.9e-75 4
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 704 3.9e-75 4
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 704 3.9e-75 4
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 704 3.9e-75 4
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 704 3.9e-75 4
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 701 9.0e-75 4
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 693 8.1e-74 4
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 704 8.2e-73 3
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 704 8.2e-73 3
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 704 1.0e-72 3
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 641 7.7e-72 4
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 645 2.9e-71 4
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 645 2.9e-71 4
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 697 9.1e-70 2
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 699 1.4e-69 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 671 2.2e-69 2
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 671 2.2e-69 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 657 1.2e-67 3
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 690 2.8e-67 1
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 687 6.0e-67 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 641 9.0e-67 3
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 640 1.2e-66 3
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 672 1.2e-66 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 586 5.0e-66 2
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 664 1.2e-65 2
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 600 1.8e-65 3
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 655 2.2e-65 2
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 651 4.7e-65 2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 651 6.0e-65 2
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 648 1.0e-64 2
WB|WBGene00004191 - symbol:prx-1 species:6239 "Caenorhabd... 579 2.3e-63 3
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 651 5.0e-63 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 651 5.0e-63 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 649 8.3e-63 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 649 8.3e-63 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 645 2.2e-62 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 644 2.9e-62 1
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 595 5.5e-62 2
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 627 7.0e-62 2
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 640 7.8e-62 1
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 632 5.8e-61 1
UNIPROTKB|E1B8F6 - symbol:PEX6 "Uncharacterized protein" ... 652 6.6e-61 2
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 643 4.1e-60 2
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 641 6.8e-60 1
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:... 651 1.5e-59 3
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 631 9.0e-59 1
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 631 9.0e-59 1
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 634 1.3e-58 2
UNIPROTKB|F1NYD5 - symbol:PEX6 "Uncharacterized protein" ... 606 3.8e-58 1
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 624 5.7e-58 1
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 551 7.3e-58 2
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 551 7.3e-58 2
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 531 1.0e-57 2
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 545 2.3e-57 3
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 597 2.6e-57 2
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 598 2.8e-57 1
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 541 3.3e-57 2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 499 4.7e-57 3
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 541 1.6e-56 4
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 541 1.6e-56 4
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 587 4.2e-56 1
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 528 4.7e-56 3
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 531 5.1e-56 2
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 585 7.0e-56 1
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 585 7.0e-56 1
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 530 1.6e-55 3
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 521 4.5e-55 2
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 526 4.5e-55 3
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 515 1.1e-54 2
UNIPROTKB|P96281 - symbol:Rv0435c "Transitional endoplasm... 546 3.3e-54 2
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 508 3.5e-54 2
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 531 3.7e-54 2
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 582 7.2e-54 1
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702... 533 7.0e-53 2
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 553 1.4e-50 2
UNIPROTKB|G4NBI6 - symbol:MGG_00529 "Peroxisomal biogenes... 514 1.5e-50 3
SGD|S000005273 - symbol:PEX6 "AAA-peroxin" species:4932 "... 555 3.3e-50 1
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 501 6.0e-50 2
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 533 1.7e-49 1
ZFIN|ZDB-GENE-081104-252 - symbol:pex6 "peroxisomal bioge... 523 1.8e-49 2
WARNING: Descriptions of 571 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 3336 (1179.4 bits), Expect = 0., P = 0.
Identities = 686/1139 (60%), Positives = 838/1139 (73%)
Query: 1 MELE--VRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGA 58
ME E V V GV+ CFVSLP +L+ L+ST S+ L P +L +ELRS ++RW VAWSG+
Sbjct: 14 METEAVVNTVAGVD-CFVSLPRQLLHALQSTSSSPL-PPLLPVELRS-GDRRWSVAWSGS 70
Query: 59 TSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAE 118
+SSSS IE+AR FAE ISL D T+V+VRV+ NV KATLVT+EP TEDDWEVLELN+E AE
Sbjct: 71 SSSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELNAELAE 130
Query: 119 AAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVK 178
AAIL+QVRI+HE M+FPLWLH RT+I F VVSTFP K VVQLVPGTEVAVAPKRR N+K
Sbjct: 131 AAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLK 190
Query: 179 KHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVAFINPETAENVS 238
+ + N KALLRVQ++D H+ +VKG EL VALTS+A+I+PETA+ S
Sbjct: 191 AKKSQEKECNN-----VKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHS 245
Query: 239 LCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSV 298
L SL+L+++ PR+ K + ++ A +K++ SK G S+ KKE RQA++ L+FSD
Sbjct: 246 LESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLA 305
Query: 299 AKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLE 358
AKGH+ + +LRLYL AGLHSWVYL+ C VN KEIP +SLSPC FK+ E +K G +
Sbjct: 306 AKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTD 365
Query: 359 -LDNKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEAVYQFENKKGLE 417
L N N K + Y+D D S D ++ ALSSE E +NKKGLE
Sbjct: 366 RLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHD----KNKKGLE 421
Query: 418 CLLHTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPA--SCNGALEN 475
L W LAQL A+AS G + ++L++ ET HFEV+G +S Y + S N E+
Sbjct: 422 YLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLES--YKSIDGQPSVNDRWES 479
Query: 476 KTKARELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSV 535
K + EI V+T S+ESL G K Y+L+L+ R ++++N + + K+N G+ +
Sbjct: 480 GKKDKHTPLEILYVMTVSDESLLGDKFAGYDLSLD-RSEKSDNVVHIEPVLEKMNLGEPI 538
Query: 536 SFYTVKERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILI 595
+ KE +G ++SSL+WMG SDVI R+ VLLSP +G+WFS + +P PGHILI
Sbjct: 539 YLKSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILI 598
Query: 596 HGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHA 655
+GPPGSGKT LA+A AK E KDL+AH++ V CS L+LEK I LS+ I+E L+HA
Sbjct: 599 YGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHA 658
Query: 656 PSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVAS 715
PS++I D+L V LTKFL D++D+YGE R SSCGIGP+AFVAS
Sbjct: 659 PSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVAS 718
Query: 716 AQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDG 775
QSLE+IPQ+L+SSGRFDFHVQL APA SER AIL+HEIQ+R L+CS++ILL++A+KC+G
Sbjct: 719 VQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEG 778
Query: 776 YDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTS 835
YDAYDLEILVDR VHAA+GR+L +S+ K+ LV++DF++AMH+F+PVAMRDITK++
Sbjct: 779 YDAYDLEILVDRAVHAAIGRHLPLESNISKY---NLVKEDFTRAMHDFVPVAMRDITKSA 835
Query: 836 AEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIV 895
+EGGR GW+DVGG+TDI+NAIKEMIELPSKFP IFA++PLRLRSNVLLYGPPGCGKTHIV
Sbjct: 836 SEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIV 895
Query: 896 GAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH 955
GAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA AAAPC+LFFDEFDSIAPKRGH
Sbjct: 896 GAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGH 955
Query: 956 DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD ALLRPGRLDRLL CDFPSP
Sbjct: 956 DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPP 1015
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEP 1075
ERL+IL V+SRKL +ADD+DLE IA MTEGFSG VHE LN D E
Sbjct: 1016 ERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPET 1075
Query: 1076 GKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAKGKRATLA 1134
G P+ITD LLKSIASK +PSVSE EK +LY IY QFLDS+KS SR+AKGKRATLA
Sbjct: 1076 GTTPIITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKS----SREAKGKRATLA 1130
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 830 (297.2 bits), Expect = 1.7e-123, Sum P(5) = 1.7e-123
Identities = 165/374 (44%), Positives = 243/374 (64%)
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
PI +A+ S + + QS+ F ++L AP ER ILE ++ + + D+ L+
Sbjct: 729 PIVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILERYLKYQGKQLKDQQSLN 788
Query: 769 V---ASKCDGYDAYDLEILVDRTVH-AAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHE-F 823
+ ++ +GY D+E +VDR++H +++ +++++ + + ++ + E +
Sbjct: 789 LMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNNDDNDDDNIIEFSIIEKAKEGY 848
Query: 824 LPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLL 883
P+ ++ I S+E W D+GGL ++ +KE IE P+K+P +F +PLRLRS +LL
Sbjct: 849 TPITLKGIKLHSSE---IKWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILL 905
Query: 884 YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFF 943
YGP GCGKT + A A C L FISVKGPELLNKYIG+SEQ VRD+FS+A++A PC+LFF
Sbjct: 906 YGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFF 965
Query: 944 DEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRL 1003
DEFDSIAP+RGHDN+GVTDRVVNQFLT+LDGVE LTGV+V AATSRPDL+D ALLRPGRL
Sbjct: 966 DEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRL 1025
Query: 1004 DRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXV 1063
D+ L+C+ P ERLDIL + K+ L+ + LE ++ T+ ++G +
Sbjct: 1026 DKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQLKSI 1085
Query: 1064 HEILNNIDSNEPGK 1077
HE +N+++ + K
Sbjct: 1086 HEWMNHLEEEKKRK 1099
Score = 280 (103.6 bits), Expect = 1.7e-123, Sum P(5) = 1.7e-123
Identities = 68/214 (31%), Positives = 120/214 (56%)
Query: 1 MELEVRVVGGVENCFVSLPLKLIETLE--STRSAHLLPQVLSLELR-----SRSNQRWVV 53
MEL V++ + CFVSLP K++ +L S + + L L LE+ ++ + V
Sbjct: 1 MELHVQLKHSTD-CFVSLPPKIVHSLLLLSEKQSKSLG-TLGLEITWYDKINKKENKGYV 58
Query: 54 AWSGATSSSSF---IEVARQFAECIS-LADHTIVQVRVVSNVLKATLVTIEPLTEDDWEV 109
W+G ++ F IE++++ A+C+ + + ++++ ++N+ A V +EPLT DDWE+
Sbjct: 59 GWAGGSTDPRFTDSIEMSQEMAQCLGGIKNEQKLKLKALNNIELAHSVQVEPLTSDDWEI 118
Query: 110 LELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVA 169
+E++ ++ E +LNQV I++ P+W+H +TII V T P PVV+L +E+ VA
Sbjct: 119 MEVHQQYLEEQLLNQVNILYSGQIVPIWIHHKTIIKLKVTETLPT-PVVKLSSNSEIIVA 177
Query: 170 PKRRKNNVKKHEDSYMQAFNESTSIAKALLRVQD 203
PK R N S Q ++ T + L+++D
Sbjct: 178 PKPR-NLPTTTTSSQQQQISKET-LKPRFLQIKD 209
Score = 84 (34.6 bits), Expect = 1.7e-123, Sum P(5) = 1.7e-123
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 1068 NNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAK 1127
+N+ + +P P+IT + + ++ PS+SE+E+ + IY FL + SV ++
Sbjct: 1165 SNLSNEQP---PLITQSHIDLALKESSPSISESERKKYERIYNNFLKERGSVTGNKKEGV 1221
Query: 1128 GKRATLA 1134
K+ TLA
Sbjct: 1222 PKQ-TLA 1227
Score = 68 (29.0 bits), Expect = 3.1e-26, Sum P(5) = 3.1e-26
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 530 NSGDSVSFYTVKER---GST----QGFDSNVSSLSWMGTTASDVINR-IKVLLS-PDS-G 579
N D++ +++ E+ G T +G + S + W D + +K + P
Sbjct: 830 NDDDNIIEFSIIEKAKEGYTPITLKGIKLHSSEIKWQDIGGLDSVRAMLKETIEWPTKYP 889
Query: 580 LWFSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
F + L L IL++GP G GKT LA A+A
Sbjct: 890 KLFQSSPLRLRSGILLYGPTGCGKTLLASAIA 921
Score = 51 (23.0 bits), Expect = 1.7e-123, Sum P(5) = 1.7e-123
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 246 AILPRLSSKENNPENNAPRIKSNLTSKEISGGASTD 281
+I+P SS ++P NN +SN + I+ D
Sbjct: 440 SIIPPTSSSSSSPSNNLDSQRSNNNNNNINNDQLND 475
Score = 46 (21.3 bits), Expect = 3.1e-26, Sum P(5) = 3.1e-26
Identities = 25/124 (20%), Positives = 51/124 (41%)
Query: 706 GIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI 765
G+ + +A+ + I +L GR D + P +ER IL + + S I
Sbjct: 999 GLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILT--CLKSKMNLSPSI 1056
Query: 766 LLD-VASKCDGYDAYDLEILVD----RTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAM 820
L+ +++ Y DL L+ +++H + +L + ++ K + SQ
Sbjct: 1057 SLEQLSTNTQYYTGADLRALMYNAQLKSIHEWMN-HLEEEKKRKRKEKEDQSNKNSSQQQ 1115
Query: 821 HEFL 824
+F+
Sbjct: 1116 DDFI 1119
Score = 45 (20.9 bits), Expect = 1.7e-123, Sum P(5) = 1.7e-123
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 587 LPLPG--HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQ 642
L PG ++I G GSGK+ LA ++ A I+ + C++L K IR+
Sbjct: 597 LNTPGVNGMIIAGSHGSGKSLLATSLGGYYSTDSRSNAFIIKLDCNQLKELKVENIRK 654
Score = 45 (20.9 bits), Expect = 7.4e-123, Sum P(5) = 7.4e-123
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 358 ELDNKNHKTKKMLEKTSSGIY 378
+LDNKN+ KK +K + IY
Sbjct: 297 QLDNKNNNNKKN-KKNNKTIY 316
Score = 44 (20.5 bits), Expect = 9.4e-123, Sum P(5) = 9.4e-123
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 444 LSNETLL--HFEVKGYKSGTYGKVPASCNGALENKTKARELRTEIFCVLTFSEESLHGGK 501
+S ETL ++K +K Y N NK + + I ++ S+ S + K
Sbjct: 195 ISKETLKPRFLQIKDFKID-YNNNNTFINEIYINKELLNQFQWNIGDIIEISKVSKNNNK 253
Query: 502 NNAYE 506
NN E
Sbjct: 254 NNKKE 258
Score = 43 (20.2 bits), Expect = 2.8e-123, Sum P(5) = 2.8e-123
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 501 KNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSFY-TVKERGST 546
++NA+ + L+ + E +R+ F KL FY + KE G+T
Sbjct: 631 RSNAFIIKLDCNQLKELKVENIRKQFNKL-------FYKSCKESGNT 670
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 896 (320.5 bits), Expect = 1.7e-114, Sum P(4) = 1.7e-114
Identities = 203/467 (43%), Positives = 288/467 (61%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ G GSGK++LAKA+ K E L AH+ + C L ++ I++ L+ SE
Sbjct: 592 GALLLTGGKGSGKSTLAKAICK--EAFDILDAHVEIIDCKALRGKRLENIQKTLAAAFSE 649
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
AL PS+V+ D+L + + L L D++ E+ S G
Sbjct: 650 ALWRQPSVVLLDDLDLVVGRSALPEHEHSPEAIQSQRLAHALNDLVKEF-----ISMG-S 703
Query: 709 PIAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLECSDEIL 766
+A +A++QS + P +++ G F VQ P +++ + H I + L+C +
Sbjct: 704 LVALIATSQSQHSLHPLLVSAQGIHIFQCVQHIQPPDQDQRCEILHAIIKNKLDCDMKRF 763
Query: 767 --LD---VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMH 821
LD +A + +G+ A D +LVDR +H+ + + + E+ + TL DF +A+
Sbjct: 764 TGLDLQRIAKETEGFVARDFTMLVDRAIHSHLSH--QNVYTREELVLTTL---DFQKALR 818
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
F PV++R++ GWD +GGL D++ + + I+LP+K+P +FA P+R R+ V
Sbjct: 819 GFTPVSLRNVNLHKPRD--LGWDRIGGLHDVRQILVDTIQLPAKYPELFANLPIRQRTGV 876
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRD+F +A AA PC+L
Sbjct: 877 LLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDVFVRAQAAKPCIL 936
Query: 942 FFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPG 1001
FFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPG
Sbjct: 937 FFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPG 996
Query: 1002 RLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLD+ ++C P RL+IL V+S LPLADDVDL+ +A +T+ F+G
Sbjct: 997 RLDKCVYCPPPDQASRLEILNVLSESLPLADDVDLQHVASLTDSFTG 1043
Score = 193 (73.0 bits), Expect = 1.7e-114, Sum P(4) = 1.7e-114
Identities = 49/166 (29%), Positives = 89/166 (53%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAW-SG---ATSSSSFIEVA 68
+CF+ LP +L+ L HLL Q ++E+ + +Q ++W G + + E+
Sbjct: 25 DCFLHLPRRLVAQL------HLL-QNQAIEV-AWGHQPAFLSWVEGRHFSDEGENVAEIN 76
Query: 69 RQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIV 128
RQ + + L++ V ++ S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV
Sbjct: 77 RQVGQKLGLSNGAQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAASLEQHLLDQIRIV 136
Query: 129 HEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK 174
FP+W+ +T I + + P P +L + + + PK R+
Sbjct: 137 FPKAIFPVWVDQQTYIFIQIAALIPDAPYGRLETDSRLLIQPKTRQ 182
Score = 54 (24.1 bits), Expect = 1.7e-114, Sum P(4) = 1.7e-114
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1075 PGKMPV-ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAK-GKRAT 1132
P K + I+ + L + S RPS+SE + +Y F + KK + G++ T
Sbjct: 1220 PSKTSLAISQSHLMTALSHTRPSISEDDWKTFAELYESFQNPKKRKNQSGTVFRPGQKVT 1279
Query: 1133 LA 1134
LA
Sbjct: 1280 LA 1281
Score = 42 (19.8 bits), Expect = 1.7e-114, Sum P(4) = 1.7e-114
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPM-VSLSP 341
+E + A+ + D + G V I LR LN +H+ V + V + IP + L P
Sbjct: 391 EELKNAIKYTKNLDVLHLGKVWIPHDLRKRLNIEMHAVVRITP--VEITPNIPRSLKLQP 448
Score = 41 (19.5 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 598 PPGSGKTSLA 607
PPG KTSLA
Sbjct: 1217 PPGPSKTSLA 1226
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 881 (315.2 bits), Expect = 8.1e-114, Sum P(4) = 8.1e-114
Identities = 204/483 (42%), Positives = 284/483 (58%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L G GSGK++LAKA+ K E L AH+ V C L ++ I++ + SE
Sbjct: 577 GALLFTGGKGSGKSTLAKAICK--EASDTLDAHVEVVGCKALRGKRLENIQKTVELAFSE 634
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A PS+++ D+L V + L L D+M E+ S G
Sbjct: 635 ATWRQPSVILLDDLDLIVGVPAAPEHEHGPEAVQSQRLAHALSDMMKEF-----ISMG-S 688
Query: 709 PIAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLECSDEIL 766
+A +A++QS + P +++ G F VQ P E++ + H + + L+C
Sbjct: 689 LVAVIATSQSQHSLHPWLVSAQGIHIFQCVQHIQPPNQEQRCEILHNVIKNKLDCDINRF 748
Query: 767 --LD---VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMH 821
LD +A + +G+ A D +LVDR +H+ + ++ E+ + TL DF +A+
Sbjct: 749 TNLDLKRIAKETEGFVARDFTVLVDRAIHSHLSH--QRITTREELVLTTL---DFQKALQ 803
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
F+P ++R++ GWD +GGL +++ + + I+LP+K+P +FA P+R R V
Sbjct: 804 GFIPASLRNVNLHKPRD--LGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGV 861
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+L
Sbjct: 862 LLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCIL 921
Query: 942 FFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPG 1001
FFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPG
Sbjct: 922 FFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPG 981
Query: 1002 RLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXX 1061
RLD+ ++C P RL+IL V+S LPLADDVDL+ +A +T F+G
Sbjct: 982 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLE 1041
Query: 1062 XVH 1064
VH
Sbjct: 1042 AVH 1044
Score = 202 (76.2 bits), Expect = 8.1e-114, Sum P(4) = 8.1e-114
Identities = 60/207 (28%), Positives = 106/207 (51%)
Query: 7 VVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAW-SG---ATSSS 62
V +CF+ LP +L+ L HLL Q ++E+ + +Q ++W G +
Sbjct: 20 VFTNARDCFLRLPRRLVAQL------HLL-QNQAIEV-AWGHQPAFLSWVEGRHFSDQGE 71
Query: 63 SFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAIL 122
+ E+ R + + L++ V +++ S+V+ V +EPL+ DDWE+LEL++ E +L
Sbjct: 72 NVAEINRHVGQKLGLSNGDQVFLKLCSHVVSCQQVEVEPLSADDWEILELHAASLEQHLL 131
Query: 123 NQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NNVKK 179
+Q+RIV FP+W+ +T I +V+ P +L T++ + PK R+ N K
Sbjct: 132 DQIRIVFPKAIFPVWVDQQTYIFIQIVALMPTAAYGRLETDTKLLILPKTRQAKENTFSK 191
Query: 180 HEDSYMQAFNESTSIAKALLRVQDSDE 206
+D++ + FN K L V S+E
Sbjct: 192 ADDAHGK-FNNFGEDQKGLT-VTGSNE 216
Score = 56 (24.8 bits), Expect = 8.1e-114, Sum P(4) = 8.1e-114
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 1071 DS-NEPGKMPV---ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDA 1126
DS ++PG + I+ + L + S RPS+SE + +Y F + KK
Sbjct: 1199 DSLHQPGPVKASLAISQSHLMAALSHTRPSISEDDWKNFAELYENFQNPKKRKNQSGTMF 1258
Query: 1127 K-GKRATLA 1134
+ G++ TLA
Sbjct: 1259 RPGQKVTLA 1267
Score = 41 (19.5 bits), Expect = 8.1e-114, Sum P(4) = 8.1e-114
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPM-VSLSP 341
+E + A+ + +++ G V I LR LN +H+ V + V + +IP + L P
Sbjct: 377 EELKNAIKYTKTVEALHLGKVWIPDDLRKRLNIEMHAVVRITP--VEITPKIPRSLKLQP 434
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 878 (314.1 bits), Expect = 8.5e-114, Sum P(4) = 8.5e-114
Identities = 210/490 (42%), Positives = 288/490 (58%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ G GSGK++LAKA+ K E L AH+ + C L ++ IR+ + E
Sbjct: 601 GGVLLTGGKGSGKSTLAKAICK--EAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLE 658
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A PSI++ D+L V + L L D++ E S G
Sbjct: 659 ASWRQPSIILLDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDLIKEV-----ISLG-S 712
Query: 709 PIAFVASAQSLEKIPQSLTSS-GRFDFHVQ--LPAPAASERKAILEHEIQRRSLEC---- 761
IA +A++QS + SL S+ G F + +P +R +L I+ + L C
Sbjct: 713 LIALIATSQSEHALHPSLVSAQGTHIFQCFKCIQSPDQKQRCEMLCSVIKNK-LNCDVKK 771
Query: 762 -SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAM 820
SD L VA + +G+ A D +LVDR +HA + + ++F+ H + L DF +A+
Sbjct: 772 FSDLDLQYVAKETEGFVARDFTMLVDRAIHACIS----NQNAFQ-HGELNLSTVDFQKAL 826
Query: 821 HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 880
+F P+A+R+++ + GWD +GGL D++ + + I LP+K+P +FA P+R RS
Sbjct: 827 KDFTPLALRNVSLHKPKD--IGWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSG 884
Query: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 940
VLLYG PG GKT + G A + FISVKGPELL+KYIGASEQAVRDIFS+A AA PC+
Sbjct: 885 VLLYGAPGTGKTLLAGVVARESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPCI 944
Query: 941 LFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRP 1000
+FFDEFDSIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRP
Sbjct: 945 VFFDEFDSIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP 1004
Query: 1001 GRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXX 1060
GRLD+ L+C P R +ILK +S L LA+DVDLE +A TE F+G
Sbjct: 1005 GRLDKCLYCPPPDQSSRCEILKALSHSLSLANDVDLEYLAAKTEHFTGADLKALLYNAQL 1064
Query: 1061 XXVHEILNNI 1070
+H + + +
Sbjct: 1065 EAIHNLSSGL 1074
Score = 203 (76.5 bits), Expect = 8.5e-114, Sum P(4) = 8.5e-114
Identities = 51/169 (30%), Positives = 80/169 (47%)
Query: 7 VVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQ-RWVVAWSGATSSSSFI 65
V+ G +CF+ LP L L + Q + + W+ S +
Sbjct: 20 VLSGTRDCFLHLPAVLASHLHLQQG-----QAVKVSYGDEPIYLSWMEIRHRGHRSENIA 74
Query: 66 EVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQV 125
E+ R AE + +AD V + S+V V +EPL+ DDWE+LEL++ E +L+Q+
Sbjct: 75 EMNRHLAEKLGIADGEQVFLEPCSHVSSCQQVEVEPLSADDWEILELHASSLEKHLLDQI 134
Query: 126 RIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK 174
RIV FP+W+ T I + + P P +L P TE+ + PK R+
Sbjct: 135 RIVFPKAIFPVWVEHHTHIYIRIGTLMPAAPYGRLEPRTELLICPKARE 183
Score = 59 (25.8 bits), Expect = 8.5e-114, Sum P(4) = 8.5e-114
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 1080 VITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAKGKRATLA 1134
+IT + L + RPS+S+ + +Y F + K+ S G++ TLA
Sbjct: 1236 IITQSHLMTALEGIRPSISQDDWKNFTELYDNFQNPKRKGQVGSAFRPGQKMTLA 1290
Score = 48 (22.0 bits), Expect = 6.2e-12, Sum P(4) = 6.2e-12
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 377 IYMDDGDLSAEDDIIAALSSEPSSKEDEEAVY---QFENKKG--LECLLHTWLLAQLTAV 431
+Y D S+ +I+ ALS S D + Y + E+ G L+ LL+ L + +
Sbjct: 1011 LYCPPPDQSSRCEILKALSHSLSLANDVDLEYLAAKTEHFTGADLKALLYNAQLEAIHNL 1070
Query: 432 ASNIGSEFNTLVLSNETLLHFEVKGYKSGT 461
+S + +F + S+ +L + SG+
Sbjct: 1071 SSGLTQDFGSSSDSDFSLSSMVFLNHSSGS 1100
Score = 45 (20.9 bits), Expect = 8.5e-114, Sum P(4) = 8.5e-114
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 365 KTKKMLEKTSSGIYMDDG-DLSAEDDIIAALSSEPSSKEDEEAVYQF 410
K K + +K + D +L D I S+P S ++ AV+ F
Sbjct: 263 KQKTLCDKDEMNTFKDKLLNLIHMDSIFRVCQSQPPSVQNASAVHAF 309
Score = 41 (19.5 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 229 INPETAENVSLCSLELVAILPRLSSKEN 256
I+ E A SL SL++ +LP S+ N
Sbjct: 1105 IDGEAAPEQSLISLDMSELLPE-DSRSN 1131
Score = 40 (19.1 bits), Expect = 2.8e-113, Sum P(4) = 2.8e-113
Identities = 26/104 (25%), Positives = 45/104 (43%)
Query: 253 SKENNPENNAPRIKSNLTSKEISGGASTDK------KECRQAVVHLLFSDSVAKGHVKIA 306
S E + + K+N S + SG S + ++ + + + +++ G V I
Sbjct: 356 SSEKQKHLTSTQDKNNSNSIQASGEGSVVQIVWNGFEDLKSVIEYGNGGEALHVGRVWIP 415
Query: 307 RALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSPCHFKMLEKD 350
LR L +HS V +K ++ K IP +SL + L KD
Sbjct: 416 DGLRKKLRIEMHSTVRIKSLE-SIPK-IP-ISLRLQPKQNLHKD 456
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 899 (321.5 bits), Expect = 1.7e-113, Sum P(3) = 1.7e-113
Identities = 201/467 (43%), Positives = 284/467 (60%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +LI G GSGK++LAKA+ K E H L AH+ V C L ++ I++AL SE
Sbjct: 593 GALLITGGKGSGKSTLAKAICK--EAHDALDAHVEMVDCKALRGKRLESIQKALEVAFSE 650
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A PS+++ D+L V + L L +++ E+ S G
Sbjct: 651 AAWRQPSVILLDDLDLIAGLPSTPEHEHSPEAVQSQRLAHALNNMIKEF-----VSMG-S 704
Query: 709 PIAFVASAQSLEKIPQSLTSS-GRFDFH-VQLPAPAASERKAILEHEIQRRSLECSDEIL 766
+A +A++Q + SL S+ G F +Q P E++ + H + + L C
Sbjct: 705 LVALIATSQLQHSLHPSLVSAQGVHTFQCIQHIQPPDQEQRCEILHSVVKNKLGCDISKS 764
Query: 767 LDVASKC-----DGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMH 821
D+ KC + + A D +LVDR +H+++ R + + + TL DF +A+
Sbjct: 765 PDLDLKCIAKETEAFVARDFTVLVDRAIHSSLSR---QQNPTREGL--TLTTADFQKALR 819
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
FLP ++R++ GWD +GGL +++ + + I+LP+K+P +FA P+R R+ +
Sbjct: 820 GFLPASLRNVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGI 877
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPG GKT + G A + FIS++GPELL+KYIGASEQAVRD+F +A AA PC+L
Sbjct: 878 LLYGPPGTGKTLLAGVVARESGMNFISIQGPELLSKYIGASEQAVRDVFIRAQAAKPCIL 937
Query: 942 FFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPG 1001
FFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPG
Sbjct: 938 FFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPG 997
Query: 1002 RLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLD+ ++C P RL+IL V+S+ LPLADDVDL+ +A +TE F+G
Sbjct: 998 RLDKCVYCPPPDQVSRLEILTVLSKSLPLADDVDLQHVASVTESFTG 1044
Score = 202 (76.2 bits), Expect = 1.7e-113, Sum P(3) = 1.7e-113
Identities = 57/184 (30%), Positives = 94/184 (51%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAW-SGA---TSSSSFIEVA 68
+CF+ LP L+ L HLL Q ++E+ +Q ++W G S + E+
Sbjct: 26 DCFLHLPRHLVAQL------HLL-QNQAIEVTG-DHQPTYLSWVEGRHFNDQSENVAEIN 77
Query: 69 RQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIV 128
RQ + + L+ V +R S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV
Sbjct: 78 RQVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILELHAISLEEHLLDQIRIV 137
Query: 129 HEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NNVKKHEDSYM 185
P+W+ +T I +V+ P P +L T++ + PK R+ + K D+
Sbjct: 138 FPKAIVPIWVDQQTYIFIQIVALMPTAPYGRLETNTKLLIQPKTRQAKESTFPKEGDARG 197
Query: 186 QAFN 189
QA N
Sbjct: 198 QAHN 201
Score = 61 (26.5 bits), Expect = 1.7e-113, Sum P(3) = 1.7e-113
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 1073 NEPGKMPV---ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAK-G 1128
N+PG + I+ A L + + RPS++E E +Y F + KK + G
Sbjct: 1218 NQPGPIKTSFAISQAHLMTALAHTRPSINEDEGKEFAELYENFQNPKKRKNQSGTVFRTG 1277
Query: 1129 KRATLA 1134
++ TLA
Sbjct: 1278 QKVTLA 1283
Score = 48 (22.0 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 219 LGVALTSVAFINPETAENVSLCSLELVAILPRLSSKENNPE 259
L VA + A+ P + L L+L+A LP E++PE
Sbjct: 644 LEVAFSEAAWRQPSV---ILLDDLDLIAGLPSTPEHEHSPE 681
Score = 42 (19.8 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 367 KKMLEKT-SSGIYMDDGDLSAED-DIIAALSSEPSSKEDEEAV 407
+K LE S + + +D D+IA L S P + EAV
Sbjct: 641 QKALEVAFSEAAWRQPSVILLDDLDLIAGLPSTPEHEHSPEAV 683
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 890 (318.4 bits), Expect = 2.3e-113, Sum P(3) = 2.3e-113
Identities = 208/507 (41%), Positives = 298/507 (58%)
Query: 551 SNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAV 610
S++ +S +G +A + I +L P S + G +LI G GSGK++ AKA+
Sbjct: 555 SSLGGVSALGASAMEHITH-SLLGRPLSRQLMALVAGLRNGALLITGGKGSGKSTFAKAI 613
Query: 611 AKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXX 670
K + D A + V C L ++ I++AL SEA PS+++ D+L
Sbjct: 614 CKEAQDTLD--ARVETVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDLIAGL 671
Query: 671 XXXXXXXXXXXXVIA--LTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTS 728
V + L L D++ E+ S G +A +A++Q + + SL S
Sbjct: 672 PSVPEQEHSPEAVQSQRLAHALNDMIKEF-----VSTG-SLVALIATSQLQQSLHPSLVS 725
Query: 729 S-GRFDFH-VQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKC-----DGYDAYDL 781
+ G F VQ P E++ + H + + L C D+ +C + + A D
Sbjct: 726 AQGIHTFQCVQHLQPPNPEQRCEILHSVVKNKLGCDISNFPDLDLQCIAKDTEAFVARDF 785
Query: 782 EILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRS 841
+LVDR +H+++ R HS S + TL DF +A+ FLP ++R++
Sbjct: 786 TVLVDRAIHSSLSRQ-HSSSREDL----TLTTSDFQKALRGFLPASLRNVNLHKPRD--L 838
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
GWD +GGL +++ + + I+LP+K+P +FA P+R R+ +LLYGPPG GKT + G A
Sbjct: 839 GWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARE 898
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ FIS+KGPELL+KYIGASEQAVRD+F +A AA PC+LFFDEF+SIAP+RGHDNTGVT
Sbjct: 899 SGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVT 958
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
DRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPGRLD+ ++C P RL+IL
Sbjct: 959 DRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEIL 1018
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSG 1048
V+S+ L LADDVDL+ +A +T+ F+G
Sbjct: 1019 TVLSKSLALADDVDLQHVASVTDSFTG 1045
Score = 209 (78.6 bits), Expect = 2.3e-113, Sum P(3) = 2.3e-113
Identities = 61/209 (29%), Positives = 108/209 (51%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAW-SGA---TSSSSFIEVA 68
+CF+ LP +L+ L HLL Q ++E+ S +Q ++W G S + E+
Sbjct: 26 DCFLHLPRRLVAQL------HLL-QNQAIEVAS-DHQPTYLSWVEGRHFNDQSENVAEIN 77
Query: 69 RQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIV 128
RQ + + L+ V +R S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV
Sbjct: 78 RQVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILELHAISLEQHLLDQIRIV 137
Query: 129 HEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NNVKKHEDSYM 185
P+W+ +T I +V+ P P +L T++ + PK R+ + K D++
Sbjct: 138 FPKAVVPIWVDQQTYIFIQIVTLMPAAPYGRLETNTKLLIQPKTRQAKESTFPKEGDAHG 197
Query: 186 QAFN---ESTSIAKALL--RVQDSDEGLS 209
Q + E ++K L ++ + EG++
Sbjct: 198 QVHSYGREQKGLSKELQTRQLHTNSEGIT 226
Score = 64 (27.6 bits), Expect = 2.3e-113, Sum P(3) = 2.3e-113
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 1073 NEPGKMPV---ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAK-G 1128
N+PG + I+ A L + + RPS+SE E +Y F + KK + G
Sbjct: 1219 NQPGPIKTTFAISQAHLMTALAHTRPSISEDEGKEFAELYENFQNPKKRKNQSGTVFRTG 1278
Query: 1129 KRATLA 1134
++ TLA
Sbjct: 1279 QKVTLA 1284
Score = 52 (23.4 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 219 LGVALTSVAFINPETAENVSLCSLELVAILPRLSSKENNPE 259
L VA + A+ P + L L+L+A LP + +E++PE
Sbjct: 645 LEVAFSEAAWRQPSV---ILLDDLDLIAGLPSVPEQEHSPE 682
Score = 42 (19.8 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 367 KKMLEKT-SSGIYMDDGDLSAED-DIIAALSSEPSSKEDEEAV 407
+K LE S + + +D D+IA L S P + EAV
Sbjct: 642 QKALEVAFSEAAWRQPSVILLDDLDLIAGLPSVPEQEHSPEAV 684
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 899 (321.5 bits), Expect = 1.9e-112, Sum P(3) = 1.9e-112
Identities = 209/486 (43%), Positives = 291/486 (59%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ G GSGK++LAKA+ K E L AH+ V C L ++ I++ L SE
Sbjct: 593 GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A+ PS+V+ D+L V + L L D++ E+ S G
Sbjct: 651 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-----ISMG-S 704
Query: 709 PIAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLEC----- 761
+A +A++QS + + P +++ G F VQ P E++ + + + L+C
Sbjct: 705 LVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKF 764
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMH 821
+D L VA + G+ A D +LVDR +H+ + R S S+ EK + TL DF +A+
Sbjct: 765 TDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSR--QSISTREKLVLTTL---DFQKALR 819
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
FLP ++R + GWD +GGL +++ + + I+LP+K+P +FA P+R R+ +
Sbjct: 820 GFLPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGI 877
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+L
Sbjct: 878 LLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCIL 937
Query: 942 FFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPG 1001
FFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPG
Sbjct: 938 FFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPG 997
Query: 1002 RLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXX 1061
RLD+ ++C P RL+IL V+S LPLADDVDL+ +A +T+ F+G
Sbjct: 998 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLE 1057
Query: 1062 XVHEIL 1067
+H +L
Sbjct: 1058 ALHGML 1063
Score = 200 (75.5 bits), Expect = 1.9e-112, Sum P(3) = 1.9e-112
Identities = 64/227 (28%), Positives = 115/227 (50%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAW-SG---ATSSSSFIEVA 68
+CF+ LP +L+ L HLL Q ++E+ S+Q ++W G + + E+
Sbjct: 26 DCFLHLPRRLVAQL------HLL-QNQAIEV-VWSHQPAFLSWVEGRHFSDQGENVAEIN 77
Query: 69 RQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIV 128
RQ + + L++ V ++ S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV
Sbjct: 78 RQVGQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIV 137
Query: 129 HEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NNVKKHEDSYM 185
FP+W+ +T I +V+ P +L T++ + PK R+ N K + Y
Sbjct: 138 FPKAIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTRRAKENTFSKADAEYK 197
Query: 186 QAFN---ESTSIAKALL--RVQDSDEGLSHKCNVKGVELGVALTSVA 227
+ + + + K L ++Q + G++ N E+ V +SVA
Sbjct: 198 KLHSYGRDQKGMMKELQTKQLQSNTVGITES-NENESEIPVDSSSVA 243
Score = 53 (23.7 bits), Expect = 1.9e-112, Sum P(3) = 1.9e-112
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 1073 NEPGKMPV---ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAK-G 1128
N+PG + I+ + L + RPS+SE + +Y F + K+ + G
Sbjct: 1218 NQPGPIKTRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQNPKRRKNQSGTMFRPG 1277
Query: 1129 KRATLA 1134
++ TLA
Sbjct: 1278 QKVTLA 1283
Score = 48 (22.0 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 219 LGVALTSVAFINPETAENVSLCSLELVAILPRLSSKENNPE 259
L VA + ++ P V L L+L+A LP + E++P+
Sbjct: 644 LEVAFSEAVWMQPSV---VLLDDLDLIAGLPAVPEHEHSPD 681
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 881 (315.2 bits), Expect = 2.0e-110, Sum P(4) = 2.0e-110
Identities = 204/483 (42%), Positives = 284/483 (58%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L G GSGK++LAKA+ K E L AH+ V C L ++ I++ + SE
Sbjct: 726 GALLFTGGKGSGKSTLAKAICK--EASDTLDAHVEVVGCKALRGKRLENIQKTVELAFSE 783
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A PS+++ D+L V + L L D+M E+ S G
Sbjct: 784 ATWRQPSVILLDDLDLIVGVPAAPEHEHGPEAVQSQRLAHALSDMMKEF-----ISMG-S 837
Query: 709 PIAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLECSDEIL 766
+A +A++QS + P +++ G F VQ P E++ + H + + L+C
Sbjct: 838 LVAVIATSQSQHSLHPWLVSAQGIHIFQCVQHIQPPNQEQRCEILHNVIKNKLDCDINRF 897
Query: 767 --LD---VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMH 821
LD +A + +G+ A D +LVDR +H+ + ++ E+ + TL DF +A+
Sbjct: 898 TNLDLKRIAKETEGFVARDFTVLVDRAIHSHLSH--QRITTREELVLTTL---DFQKALQ 952
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
F+P ++R++ GWD +GGL +++ + + I+LP+K+P +FA P+R R V
Sbjct: 953 GFIPASLRNVNLHKPRD--LGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGV 1010
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+L
Sbjct: 1011 LLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCIL 1070
Query: 942 FFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPG 1001
FFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPG
Sbjct: 1071 FFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPG 1130
Query: 1002 RLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXX 1061
RLD+ ++C P RL+IL V+S LPLADDVDL+ +A +T F+G
Sbjct: 1131 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLE 1190
Query: 1062 XVH 1064
VH
Sbjct: 1191 AVH 1193
Score = 188 (71.2 bits), Expect = 2.0e-110, Sum P(4) = 2.0e-110
Identities = 47/159 (29%), Positives = 82/159 (51%)
Query: 51 WVVAWSGATSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVL 110
WV + + E+ R + + L++ V +++ S+V+ V +EPL+ DDWE+L
Sbjct: 209 WVEGRHFSDQGENVAEINRHVGQKLGLSNGDQVFLKLCSHVVSCQQVEVEPLSADDWEIL 268
Query: 111 ELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAP 170
EL++ E +L+Q+RIV FP+W+ +T I +V+ P +L T++ + P
Sbjct: 269 ELHAASLEQHLLDQIRIVFPKAIFPVWVDQQTYIFIQIVALMPTAAYGRLETDTKLLILP 328
Query: 171 KRRK---NNVKKHEDSYMQAFNESTSIAKALLRVQDSDE 206
K R+ N K +D++ + FN K L V S+E
Sbjct: 329 KTRQAKENTFSKADDAHGK-FNNFGEDQKGLT-VTGSNE 365
Score = 56 (24.8 bits), Expect = 2.0e-110, Sum P(4) = 2.0e-110
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 1071 DS-NEPGKMPV---ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDA 1126
DS ++PG + I+ + L + S RPS+SE + +Y F + KK
Sbjct: 1348 DSLHQPGPVKASLAISQSHLMAALSHTRPSISEDDWKNFAELYENFQNPKKRKNQSGTMF 1407
Query: 1127 K-GKRATLA 1134
+ G++ TLA
Sbjct: 1408 RPGQKVTLA 1416
Score = 41 (19.5 bits), Expect = 2.0e-110, Sum P(4) = 2.0e-110
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPM-VSLSP 341
+E + A+ + +++ G V I LR LN +H+ V + V + +IP + L P
Sbjct: 526 EELKNAIKYTKTVEALHLGKVWIPDDLRKRLNIEMHAVVRITP--VEITPKIPRSLKLQP 583
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 875 (313.1 bits), Expect = 2.4e-108, Sum P(3) = 2.4e-108
Identities = 204/484 (42%), Positives = 288/484 (59%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +LI G GSGK+SL++A+ + +DL AHI + C L ++ IRQ L + +
Sbjct: 557 GALLITGAKGSGKSSLSRALCRKAS--EDLDAHIQLLDCKTLKGKRTDTIRQRLEDVFEQ 614
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A+ PS+V+ D+L V+ +++ L D++DE +SS
Sbjct: 615 AVWRQPSVVLLDDLDHVAGAATSPEHEHGPEAVLRQHISQSLKDLVDEI--VLRSSL--- 669
Query: 709 PIAFVASAQSLEKIPQSLT---SSGRFDFHVQLPAPAASERKAILEHEIQRRSLE-CSDE 764
IA + +AQ+ + +LT S F ++P P ++R IL+ I ++S + C
Sbjct: 670 -IALIVTAQTEHALHPTLTVVQGSHFFQSFCKIPTPDQAQRVEILKSLIVKKSFQVCQTT 728
Query: 765 ILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
+ LD VA + +G+ A DL +L++R +HA LH+ L DF QA+ F
Sbjct: 729 LDLDSVAKETEGFMARDLNLLLERAIHANT---LHNSED--------LSCKDFRQALQGF 777
Query: 824 LPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLL 883
P ++ D + A G +G + +GGL + + + ++I LP+K+P +F+ PLR S VLL
Sbjct: 778 TPPSLWD-AQLQAPSG-AGMERIGGLHEARQLLMDIILLPAKYPLLFSSLPLRQCSGVLL 835
Query: 884 YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFF 943
YG PG GKT + GA A + FIS+KGPELL+KYIGASEQAVRD+F +A A PC+LFF
Sbjct: 836 YGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQRAQQAKPCILFF 895
Query: 944 DEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRL 1003
DEFDS+AP+RGHDNTGVTDRVVNQ LT+LDGVE LTGV+V AA+SRPDL+D ALLRPGRL
Sbjct: 896 DEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLTGVYVLAASSRPDLIDPALLRPGRL 955
Query: 1004 DRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXV 1063
D+ L+C P RL+IL+ ++ +PLA DVDL+ IA TE F+G +
Sbjct: 956 DKSLYCPPPDRAARLEILRALTHSVPLAADVDLDQIAGATELFTGADLKALLYNAQLEAI 1015
Query: 1064 HEIL 1067
H L
Sbjct: 1016 HSSL 1019
Score = 195 (73.7 bits), Expect = 2.4e-108, Sum P(3) = 2.4e-108
Identities = 52/159 (32%), Positives = 80/159 (50%)
Query: 26 LESTRSAHL-LPQVLSLELRSRSNQRWVVAWSGATSSS--SFIEVARQFAECISLADHTI 82
L S + HL L + LEL + ++W + SS +E++RQ E + L D
Sbjct: 24 LSSNFATHLCLHENQILELSWGVSAPVFLSWIRSRSSGPEDRVEISRQLGEKLGLRDGEQ 83
Query: 83 VQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRT 142
+R V V++EPL+ DDWE+LEL+S E IL+Q+R+V FP+W+ T
Sbjct: 84 GYLRPCLQVQSVQQVSVEPLSPDDWEILELHSLALEQRILDQIRVVFSDGVFPVWVDQHT 143
Query: 143 IITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVKKHE 181
+I + S P P +L TE+ V+PK + H+
Sbjct: 144 VIYIRIASLTPSVPYGRLEQFTELIVSPKLHPGSELLHK 182
Score = 76 (31.8 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 572 VLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAK 612
+LL L FS+ L +L++G PG+GKT LA AVAK
Sbjct: 812 ILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAK 852
Score = 40 (19.1 bits), Expect = 2.4e-108, Sum P(3) = 2.4e-108
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 276 GGASTDKKECRQAVVHLLFSDSVAKGHVKIARALR 310
GG + Q + H L S+++ + R LR
Sbjct: 521 GGVEDISRSAFQHISHALLGGSLSRELISTGRGLR 555
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 852 (305.0 bits), Expect = 9.3e-108, Sum P(4) = 9.3e-108
Identities = 195/466 (41%), Positives = 283/466 (60%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ G GSGK++LAKA+ K E L AH+ V C L ++ +++ + SE
Sbjct: 596 GALLLTGGKGSGKSTLAKAICK--EAFDVLDAHVEIVDCKALRGKRLENLQKTIVAAFSE 653
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPI 710
A PS+V+ D+L V ++ L +++ K S G +
Sbjct: 654 ASWRQPSVVLLDDLDLVAGLPALPEHEHSPEAV--QSQRLAHALNDM-TKELISMG-SLV 709
Query: 711 AFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLEC-----SD 763
A +A++QS + P +++ G F VQ P E++ + H + L+C +D
Sbjct: 710 ALIATSQSQHSLHPLLVSAQGIHLFQCVQHIQPPDQEQRCEILHNAIKNKLDCDMNSFTD 769
Query: 764 EILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
L +A + +G+ A D +LVDR +H+ + S S+ E+ + TL DF +A+ F
Sbjct: 770 LDLKRIAKETEGFVARDFIVLVDRAIHSRLSN--QSVSTREELVLTTL---DFQKALQGF 824
Query: 824 LPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLL 883
+P ++R++ GWD +GGL +++ + + I+LP+K+P +FA P+R R+ VLL
Sbjct: 825 VPASLRNVNLHKPRD--LGWDHIGGLREVRQILMDTIQLPAKYPELFANLPIRQRTGVLL 882
Query: 884 YGPPGCGKTHIVGAAAAACSLRFISVK-GPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPG GKT + G A + + ++ GPELL+KYIGASEQAVRDIF +A AA PC+LF
Sbjct: 883 YGPPGTGKTLLAGVVARESGMILLVLRYGPELLSKYIGASEQAVRDIFIRAQAAKPCILF 942
Query: 943 FDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGR 1002
FDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPGR
Sbjct: 943 FDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGR 1002
Query: 1003 LDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD+ ++C P RL+IL V+S LPLA+DVDL+ +A +T+ F+G
Sbjct: 1003 LDKCVYCPPPDQVSRLEILNVLSASLPLAEDVDLQHVASLTDSFTG 1048
Score = 179 (68.1 bits), Expect = 9.3e-108, Sum P(4) = 9.3e-108
Identities = 53/195 (27%), Positives = 93/195 (47%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLEL---RSRSNQRWVVAWSGATSSSSFIEVAR 69
+CF+ LP +L+ L HLL Q ++E+ + + WV + E+ R
Sbjct: 26 DCFLHLPRRLVAQL------HLL-QNQAIEVTWGQQPAFLSWVEGRHFRDQGENVAEINR 78
Query: 70 QFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVH 129
Q + + L++ V ++ S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV
Sbjct: 79 QVGQKLGLSNGEQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAASLEQHLLDQIRIVF 138
Query: 130 EAMRFPLWLHGRTIITFHV--VSTFPKKPVVQLVPGTEVAVAPKRR--KNNVKKHEDSYM 185
FP+W+ +T + + V+ P +L + + + PK R K N D+
Sbjct: 139 PKAIFPIWVDQQTYVFIQIDTVALIPGASYGRLETDSRLLIQPKTRQAKENTFSKGDNAR 198
Query: 186 QAFNESTSIAKALLR 200
F+ K L +
Sbjct: 199 GKFHNYEGNQKGLTK 213
Score = 59 (25.8 bits), Expect = 9.3e-108, Sum P(4) = 9.3e-108
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 1073 NEPGKMPV---ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAK-G 1128
N+PG + I+ + L + S RPS+SE + +Y F + KK + G
Sbjct: 1221 NQPGPIRTSLAISQSHLMTALSHTRPSISEDDWKNFAELYENFQNPKKRKNQSGTVFRPG 1280
Query: 1129 KRATLA 1134
++ TLA
Sbjct: 1281 QKVTLA 1286
Score = 49 (22.3 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 237 VSLCSLELVAILPRLSSKENNPEN-NAPRIK---SNLTSKEISGGA 278
V L L+LVA LP L E++PE + R+ +++T + IS G+
Sbjct: 662 VLLDDLDLVAGLPALPEHEHSPEAVQSQRLAHALNDMTKELISMGS 707
Score = 42 (19.8 bits), Expect = 9.3e-108, Sum P(4) = 9.3e-108
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPM-VSLSP 341
+E + AV + +++ G V I LR LN +H+ V + V + +IP ++L P
Sbjct: 394 EELKNAVKYTKNVEALHLGKVWIPDDLRKRLNIEMHAVVRITP--VEITPKIPRSLTLQP 451
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 845 (302.5 bits), Expect = 9.2e-107, Sum P(3) = 9.2e-107
Identities = 203/545 (37%), Positives = 291/545 (53%)
Query: 594 LIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFISEAL 652
L++G GSGKT L K VA+ L ++ C + E + + +I
Sbjct: 495 LVYGNSGSGKTLLLKLVAQQLNQQHGYFTK--YISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
+ PS++I DN+ LT+F + + + + S+ I
Sbjct: 553 WNKPSVLILDNIDKLMSVEMENMDATKSNQ---LTEFFISNLTKIHHQLNSNLSI----- 604
Query: 713 VASAQSLEKIPQSLTSSGRFD-FHVQLPAPAASERKAILEHEIQRR-SLECSDEILLDVA 770
+ SA S + I + L S + FH L P S R IL+ + + L+ + L+D+
Sbjct: 605 LLSANSKDNINKLLLGSHLIENFH-HLNPPDKSLRFEILDKYLTNKLGLKIKVD-LMDLV 662
Query: 771 SKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI--KPTLVRDDFSQAMHEFLPVAM 828
S+ +GY DL+IL DR H + +++ E + + +A+ + P +
Sbjct: 663 SETEGYLPNDLKILSDRIYHEVLFNSTETETETETEATTNAAVTSEHIEKALAGYTPSNL 722
Query: 829 RDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPG 888
R + + W D+GGL + +N + E +E P+K+ IFA PLRLRS +LLYG PG
Sbjct: 723 RGV---KLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPG 779
Query: 889 CGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDS 948
CGKT + A A C L FIS+KGPE+LNKYIGASEQ+VR++F +A AA PC+LFFDEFDS
Sbjct: 780 CGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDS 839
Query: 949 IAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLF 1008
IAPKRGHD+TGVTDRVVNQ LT++DG E L GV+V AATSRPDL+D+ALLRPGRLD+ +
Sbjct: 840 IAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVI 899
Query: 1009 CDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILN 1068
CD P+ +RLDIL+ I+ K+ L+DDV+L IA T GFSG VH L
Sbjct: 900 CDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLE 959
Query: 1069 NID-------SNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAA 1121
+ +NE G +++ + + EK++L QF++ K +
Sbjct: 960 ELSQREQDEANNEDGNNNFEKNSIEFFQVGNSEKKLKTNEKIQLLHQIQQFMNPNKDNSD 1019
Query: 1122 QSRDA 1126
R A
Sbjct: 1020 SERKA 1024
Score = 177 (67.4 bits), Expect = 9.2e-107, Sum P(3) = 9.2e-107
Identities = 81/353 (22%), Positives = 162/353 (45%)
Query: 44 RSRSNQRWVVAWSGATSSS-SFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPL 102
++ + + WSG +SS S +E+ FA+ ++L D T + V + ++T + +EPL
Sbjct: 52 KNSTTTKHYAGWSGMSSSDISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPL 111
Query: 103 TEDDWEVLELNSEHAEAAILNQVRIV---HEAMRFPLWLHGRTIITFHVVSTFPKKPVVQ 159
T DWE++EL+++ E +L+Q R V + +P ++ + ST +
Sbjct: 112 TSSDWELVELHAQSIEDKLLSQTRCVALNQVLVVYPSATTSAKLLVTDLGST--DHTFAK 169
Query: 160 LVPGTEVAVAPKRRKNNVKKHEDSYMQAFNESTSIAKALLRV-QDSDEGLSHKCNV--KG 216
+ P E+A+APK R+ K ++ + + ++S + +K+ R S E S +V +G
Sbjct: 170 ISPYCEIAIAPKVREKEQKNNKTA---SSSKSIASSKSTKRTTSSSSEDYSDLPSVLKRG 226
Query: 217 VELGVALTSVA------FINPETAENVSL-CSLELVAI--LPRLSSKENNPENNAPRIKS 267
+ L L +V F+ + + + + E VA+ +P + K + A +
Sbjct: 227 ISLPHKLYNVNEAVAGYFVYVDIDDELPQGFNSEYVAVSVIPGPNDKTSTKALQATEDDN 286
Query: 268 NLTSKEISGGASTDKKECRQAVVHLLFSDSVAKGHVKIARALRLYLNAG--LHSWVYLKK 325
N + S + + KE ++ + L+ S G++ ++R L + LN + + + LK
Sbjct: 287 NNNNN--SNNNNKNLKENKRIIAKLVDYKSGPSGNIGLSRNLAIALNIENQIGNIISLKP 344
Query: 326 CTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLELDNKNHKTKKMLEKTSSGIY 378
NL K ++ P + + K K I + N K K+ ++ + +Y
Sbjct: 345 AIKNLPKRPTTFTIHP--YIIHTKKKEITI-----SSNKKENKLAQQLTEIMY 390
Score = 69 (29.3 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 39/181 (21%), Positives = 78/181 (43%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLR---FIS-VKGPELLNKYIGASEQAVRDIFSK-- 932
+ L+YG G GKT ++ A + + F + ++N+ + ++ F K
Sbjct: 492 TGTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENF---QNLSKNHFFKWI 548
Query: 933 ATAA--APCLLFFDEFDSIAPKRGHDNTGVT--DRVVNQFLTELDGV--EVLTGVFVFAA 986
T A P +L D D + +N T +++ F++ L + ++ + + + +
Sbjct: 549 QTCAWNKPSVLILDNIDKLMSVE-MENMDATKSNQLTEFFISNLTKIHHQLNSNLSILLS 607
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL-KVISRKLPLADDVDLEAIAHMTEG 1045
+ D ++ LL ++ + P R +IL K ++ KL L VDL + TEG
Sbjct: 608 ANSKDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEG 667
Query: 1046 F 1046
+
Sbjct: 668 Y 668
Score = 68 (29.0 bits), Expect = 9.2e-107, Sum P(3) = 9.2e-107
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 1071 DSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSK 1116
D+ K+ + + L+S+ + +PS+S +EK++L IY +F++ +
Sbjct: 1027 DAMNKSKVLITHENFLESL-KETKPSISHSEKIKLTKIYKEFVNDR 1071
Score = 65 (27.9 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
F+ L L IL++G PG GKT LA A+A
Sbjct: 761 FANCPLRLRSGILLYGYPGCGKTLLASAIA 790
Score = 39 (18.8 bits), Expect = 2.9e-92, Sum P(3) = 2.9e-92
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 535 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVIN 568
+ T G+ + + W G ++SD+ N
Sbjct: 40 IEMVTTTSNGNKKNSTTTKHYAGWSGMSSSDISN 73
Score = 37 (18.1 bits), Expect = 4.8e-92, Sum P(3) = 4.8e-92
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 433 SNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGAL 473
+N S N L + ++ YKSG G + S N A+
Sbjct: 288 NNNNSNNNNKNLKENKRIIAKLVDYKSGPSGNIGLSRNLAI 328
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 845 (302.5 bits), Expect = 9.2e-107, Sum P(3) = 9.2e-107
Identities = 203/545 (37%), Positives = 291/545 (53%)
Query: 594 LIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFISEAL 652
L++G GSGKT L K VA+ L ++ C + E + + +I
Sbjct: 495 LVYGNSGSGKTLLLKLVAQQLNQQHGYFTK--YISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
+ PS++I DN+ LT+F + + + + S+ I
Sbjct: 553 WNKPSVLILDNIDKLMSVEMENMDATKSNQ---LTEFFISNLTKIHHQLNSNLSI----- 604
Query: 713 VASAQSLEKIPQSLTSSGRFD-FHVQLPAPAASERKAILEHEIQRR-SLECSDEILLDVA 770
+ SA S + I + L S + FH L P S R IL+ + + L+ + L+D+
Sbjct: 605 LLSANSKDNINKLLLGSHLIENFH-HLNPPDKSLRFEILDKYLTNKLGLKIKVD-LMDLV 662
Query: 771 SKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI--KPTLVRDDFSQAMHEFLPVAM 828
S+ +GY DL+IL DR H + +++ E + + +A+ + P +
Sbjct: 663 SETEGYLPNDLKILSDRIYHEVLFNSTETETETETEATTNAAVTSEHIEKALAGYTPSNL 722
Query: 829 RDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPG 888
R + + W D+GGL + +N + E +E P+K+ IFA PLRLRS +LLYG PG
Sbjct: 723 RGV---KLQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPG 779
Query: 889 CGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDS 948
CGKT + A A C L FIS+KGPE+LNKYIGASEQ+VR++F +A AA PC+LFFDEFDS
Sbjct: 780 CGKTLLASAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDS 839
Query: 949 IAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLF 1008
IAPKRGHD+TGVTDRVVNQ LT++DG E L GV+V AATSRPDL+D+ALLRPGRLD+ +
Sbjct: 840 IAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVI 899
Query: 1009 CDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILN 1068
CD P+ +RLDIL+ I+ K+ L+DDV+L IA T GFSG VH L
Sbjct: 900 CDMPNYEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLE 959
Query: 1069 NID-------SNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAA 1121
+ +NE G +++ + + EK++L QF++ K +
Sbjct: 960 ELSQREQDEANNEDGNNNFEKNSIEFFQVGNSEKKLKTNEKIQLLHQIQQFMNPNKDNSD 1019
Query: 1122 QSRDA 1126
R A
Sbjct: 1020 SERKA 1024
Score = 177 (67.4 bits), Expect = 9.2e-107, Sum P(3) = 9.2e-107
Identities = 81/353 (22%), Positives = 162/353 (45%)
Query: 44 RSRSNQRWVVAWSGATSSS-SFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPL 102
++ + + WSG +SS S +E+ FA+ ++L D T + V + ++T + +EPL
Sbjct: 52 KNSTTTKHYAGWSGMSSSDISNLEIDPVFAQSLNLIDKTPIIVNLKLGNYESTNINLEPL 111
Query: 103 TEDDWEVLELNSEHAEAAILNQVRIV---HEAMRFPLWLHGRTIITFHVVSTFPKKPVVQ 159
T DWE++EL+++ E +L+Q R V + +P ++ + ST +
Sbjct: 112 TSSDWELVELHAQSIEDKLLSQTRCVALNQVLVVYPSATTSAKLLVTDLGST--DHTFAK 169
Query: 160 LVPGTEVAVAPKRRKNNVKKHEDSYMQAFNESTSIAKALLRV-QDSDEGLSHKCNV--KG 216
+ P E+A+APK R+ K ++ + + ++S + +K+ R S E S +V +G
Sbjct: 170 ISPYCEIAIAPKVREKEQKNNKTA---SSSKSIASSKSTKRTTSSSSEDYSDLPSVLKRG 226
Query: 217 VELGVALTSVA------FINPETAENVSL-CSLELVAI--LPRLSSKENNPENNAPRIKS 267
+ L L +V F+ + + + + E VA+ +P + K + A +
Sbjct: 227 ISLPHKLYNVNEAVAGYFVYVDIDDELPQGFNSEYVAVSVIPGPNDKTSTKALQATEDDN 286
Query: 268 NLTSKEISGGASTDKKECRQAVVHLLFSDSVAKGHVKIARALRLYLNAG--LHSWVYLKK 325
N + S + + KE ++ + L+ S G++ ++R L + LN + + + LK
Sbjct: 287 NNNNN--SNNNNKNLKENKRIIAKLVDYKSGPSGNIGLSRNLAIALNIENQIGNIISLKP 344
Query: 326 CTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLELDNKNHKTKKMLEKTSSGIY 378
NL K ++ P + + K K I + N K K+ ++ + +Y
Sbjct: 345 AIKNLPKRPTTFTIHP--YIIHTKKKEITI-----SSNKKENKLAQQLTEIMY 390
Score = 69 (29.3 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 39/181 (21%), Positives = 78/181 (43%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLR---FIS-VKGPELLNKYIGASEQAVRDIFSK-- 932
+ L+YG G GKT ++ A + + F + ++N+ + ++ F K
Sbjct: 492 TGTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENF---QNLSKNHFFKWI 548
Query: 933 ATAA--APCLLFFDEFDSIAPKRGHDNTGVT--DRVVNQFLTELDGV--EVLTGVFVFAA 986
T A P +L D D + +N T +++ F++ L + ++ + + + +
Sbjct: 549 QTCAWNKPSVLILDNIDKLMSVE-MENMDATKSNQLTEFFISNLTKIHHQLNSNLSILLS 607
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL-KVISRKLPLADDVDLEAIAHMTEG 1045
+ D ++ LL ++ + P R +IL K ++ KL L VDL + TEG
Sbjct: 608 ANSKDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEG 667
Query: 1046 F 1046
+
Sbjct: 668 Y 668
Score = 68 (29.0 bits), Expect = 9.2e-107, Sum P(3) = 9.2e-107
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 1071 DSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSK 1116
D+ K+ + + L+S+ + +PS+S +EK++L IY +F++ +
Sbjct: 1027 DAMNKSKVLITHENFLESL-KETKPSISHSEKIKLTKIYKEFVNDR 1071
Score = 65 (27.9 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
F+ L L IL++G PG GKT LA A+A
Sbjct: 761 FANCPLRLRSGILLYGYPGCGKTLLASAIA 790
Score = 39 (18.8 bits), Expect = 2.9e-92, Sum P(3) = 2.9e-92
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 535 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVIN 568
+ T G+ + + W G ++SD+ N
Sbjct: 40 IEMVTTTSNGNKKNSTTTKHYAGWSGMSSSDISN 73
Score = 37 (18.1 bits), Expect = 4.8e-92, Sum P(3) = 4.8e-92
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 433 SNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGAL 473
+N S N L + ++ YKSG G + S N A+
Sbjct: 288 NNNNSNNNNKNLKENKRIIAKLVDYKSGPSGNIGLSRNLAI 328
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 899 (321.5 bits), Expect = 3.4e-97, Sum P(3) = 3.4e-97
Identities = 209/486 (43%), Positives = 291/486 (59%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ G GSGK++LAKA+ K E L AH+ V C L ++ I++ L SE
Sbjct: 271 GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 328
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A+ PS+V+ D+L V + L L D++ E+ S G
Sbjct: 329 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-----ISMG-S 382
Query: 709 PIAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLEC----- 761
+A +A++QS + + P +++ G F VQ P E++ + + + L+C
Sbjct: 383 LVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKF 442
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMH 821
+D L VA + G+ A D +LVDR +H+ + R S S+ EK + TL DF +A+
Sbjct: 443 TDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSR--QSISTREKLVLTTL---DFQKALR 497
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
FLP ++R + GWD +GGL +++ + + I+LP+K+P +FA P+R R+ +
Sbjct: 498 GFLPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGI 555
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+L
Sbjct: 556 LLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCIL 615
Query: 942 FFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPG 1001
FFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPG
Sbjct: 616 FFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPG 675
Query: 1002 RLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXX 1061
RLD+ ++C P RL+IL V+S LPLADDVDL+ +A +T+ F+G
Sbjct: 676 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLE 735
Query: 1062 XVHEIL 1067
+H +L
Sbjct: 736 ALHGML 741
Score = 53 (23.7 bits), Expect = 3.4e-97, Sum P(3) = 3.4e-97
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 1073 NEPGKMPV---ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAK-G 1128
N+PG + I+ + L + RPS+SE + +Y F + K+ + G
Sbjct: 896 NQPGPIKTRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQNPKRRKNQSGTMFRPG 955
Query: 1129 KRATLA 1134
++ TLA
Sbjct: 956 QKVTLA 961
Score = 47 (21.6 bits), Expect = 3.4e-97, Sum P(3) = 3.4e-97
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 35 LPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVARQFAE 73
LP+ L +L NQ V WS + S++E R F++
Sbjct: 31 LPRRLVAQLHLLQNQAIEVVWSHQPAFLSWVE-GRHFSD 68
>UNIPROTKB|G4MQP9 [details] [associations]
symbol:MGG_09299 "Peroxisome biosynthesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
KEGG:mgr:MGG_09299 Uniprot:G4MQP9
Length = 1250
Score = 778 (278.9 bits), Expect = 5.8e-96, Sum P(6) = 5.8e-96
Identities = 154/311 (49%), Positives = 213/311 (68%)
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT---LVRDDFSQAMHEF 823
LD+A + DGY DL +LV R +AA+ R L +++ + H+ L DF +A+ F
Sbjct: 778 LDIAGRTDGYMPGDLLLLVTRARNAALSRSLE-ETAEDDHLNALGVPLGMQDFDEALKGF 836
Query: 824 LPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLL 883
P ++ ++ S + +D +GGL++ + + E ++ P+K+ IFAQ PLRLRS +LL
Sbjct: 837 TPASLHNV---SLQSSTIKFDSIGGLSETRRVLLETLQYPTKYAPIFAQCPLRLRSGLLL 893
Query: 884 YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFF 943
YG PGCGKT + A A C L FISVKGPE+LNKYIGASE++VRD+F +A+AA PC+LFF
Sbjct: 894 YGYPGCGKTLLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERASAAKPCVLFF 953
Query: 944 DEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRL 1003
DEFDSIAPKRGHD+TGVTDRVVNQ LT++DG E L+GV+V AATSRPDL+D ALLRPGRL
Sbjct: 954 DEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPGRL 1013
Query: 1004 DRLLFCDFPSPRERLDILKVISRKLP-----LADDVDLEAIAHMTEGFSGXXXXXXXXXX 1058
D+ L CDFP+ +RLDI++ ++ K+ LA++ +L +A TEGF+G
Sbjct: 1014 DKSLICDFPNAEDRLDIIRALASKVKVGEEVLANEAELLELARRTEGFTGADLQALMSNS 1073
Query: 1059 XXXXVHEILNN 1069
+H++L +
Sbjct: 1074 QLEAIHDVLGD 1084
Score = 100 (40.3 bits), Expect = 5.8e-96, Sum P(6) = 5.8e-96
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 63 SFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAIL 122
S +E+ A + L+D + + A V IEPLT +DWEV+EL++ E ++
Sbjct: 97 SLVEIDPTLANTLGLSDGQKITAMIHLEFPMAHTVHIEPLTPEDWEVIELHANFLELNMM 156
Query: 123 NQVR 126
+QVR
Sbjct: 157 SQVR 160
Score = 93 (37.8 bits), Expect = 5.8e-96, Sum P(6) = 5.8e-96
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 572 VLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSR 631
+L+ DS L HL +L+ G GSGKTS+ K++A +L+ +D H + C
Sbjct: 535 ILVGIDSLLKELKSHLTHLSSVLLTGALGSGKTSVGKSIANALK--RDSFYHTTYFTCRS 592
Query: 632 LSLEKGPI--IRQALSNFISEALDHA----PSIVIFDNLXXXXXXXXXXXXXXXXXXVIA 685
L+ ++ + +R+ L+ A A +IVI D+L
Sbjct: 593 LTNDESRVATVRETLNRLFMNASWGARLGGKAIVILDDLDKLCPAETELQVGNDNGRSRQ 652
Query: 686 LTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASE 745
+++ L I+ +Y + + +A+AQ+ E + + V+L +P
Sbjct: 653 ISEALCAIVKQYCAEDSG------VVLLATAQAKESLHGVVIGGHVVREIVELKSPDKDA 706
Query: 746 RKAILE 751
R+ I+E
Sbjct: 707 RRKIME 712
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(5) = 1.8e-06
Identities = 34/116 (29%), Positives = 52/116 (44%)
Query: 501 KNNAYELTLEARGQQNN-NTEAV---RQLFGKLNSGDS-VSFYTVKERGSTQGFDSNVSS 555
+N A +LE + ++ N V Q F + G + S + V + ST FDS +
Sbjct: 800 RNAALSRSLEETAEDDHLNALGVPLGMQDFDEALKGFTPASLHNVSLQSSTIKFDS-IGG 858
Query: 556 LSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
LS + + + +P F+ L L +L++G PG GKT LA AVA
Sbjct: 859 LSETRRVLLETL-QYPTKYAPI----FAQCPLRLRSGLLLYGYPGCGKTLLASAVA 909
Score = 65 (27.9 bits), Expect = 3.1e-06, Sum P(6) = 3.1e-06
Identities = 44/216 (20%), Positives = 83/216 (38%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F+ L L +L++G PG GKT LA AVA + + + V + +
Sbjct: 880 FAQCPLRLRSGLLLYGYPGCGKTLLASAVAG------ECGLNFISVKGPEILNKYIGASE 933
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+++ + A P ++ FD V L+ MD G +
Sbjct: 934 KSVRDLFERASAAKPCVLFFDEFDSIAPKRGHDSTGVTDRVV----NQLLTQMD--GAE- 986
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQR----R 757
G+ + +A+ + I +L GR D + P A +R I+ +
Sbjct: 987 ----GLSGVYVLAATSRPDLIDPALLRPGRLDKSLICDFPNAEDRLDIIRALASKVKVGE 1042
Query: 758 SLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAV 793
+ ++ LL++A + +G+ DL+ L+ + A+
Sbjct: 1043 EVLANEAELLELARRTEGFTGADLQALMSNSQLEAI 1078
Score = 61 (26.5 bits), Expect = 5.8e-96, Sum P(6) = 5.8e-96
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 1071 DSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFL 1113
DS G++ + + K++ + RPS+S E+ RL IY +F+
Sbjct: 1186 DSGGAGEVVIGWSHITKAL-DETRPSISSEERARLERIYREFV 1227
Score = 61 (26.5 bits), Expect = 5.8e-96, Sum P(6) = 5.8e-96
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 4 EVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSR--SNQRWVVAWSGATS 60
E+ +V ++NC V+LP L+ L + +AH V+ L RS S + + W+G S
Sbjct: 13 EISLVH-LKNCLVNLPSALVNLLVNI-NAHAQNVVVELSWRSSDGSQKSSYLGWTGLPS 69
Score = 55 (24.4 bits), Expect = 1.6e-05, Sum P(5) = 1.6e-05
Identities = 40/208 (19%), Positives = 84/208 (40%)
Query: 844 DDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACS 903
DD GL + +++ ++ + S + ++ L S+VLL G G GKT + + A A
Sbjct: 523 DD--GLDEAESSDNILVGIDSLLKEL--KSHLTHLSSVLLTGALGSGKTSVGKSIANALK 578
Query: 904 ------LRFISVKGPELLNKYIGASEQAVRDIFSKATAAA----PCLLFFDEFDSIAPKR 953
+ + + + + + +F A+ A ++ D+ D + P
Sbjct: 579 RDSFYHTTYFTCRSLTNDESRVATVRETLNRLFMNASWGARLGGKAIVILDDLDKLCPAE 638
Query: 954 -----GHDNTGVTDRVVNQFLTELDGVEVL--TGVFVFAATSRPDLLDAALLRPGRLDRL 1006
G+DN G R +++ L + +GV + A + L ++ + +
Sbjct: 639 TELQVGNDN-G-RSRQISEALCAIVKQYCAEDSGVVLLATAQAKESLHGVVIGGHVVREI 696
Query: 1007 LFCDFPSPRERLDILKVISRKLPLADDV 1034
+ P R I++ I+++ PL D+
Sbjct: 697 VELKSPDKDARRKIMEAITKQGPLITDI 724
Score = 53 (23.7 bits), Expect = 5.8e-96, Sum P(6) = 5.8e-96
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 156 PVVQLVPGTEVAVAPKRR 173
P V++ P EV VAPK R
Sbjct: 207 PFVKIAPNAEVIVAPKER 224
Score = 39 (18.8 bits), Expect = 1.3e-83, Sum P(4) = 1.3e-83
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 319 SWVYLKKCTVNL 330
S V+LK C VNL
Sbjct: 15 SLVHLKNCLVNL 26
Score = 37 (18.1 bits), Expect = 3.1e-06, Sum P(6) = 3.1e-06
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 385 SAEDDIIAALSSEPSSKEDEEAVYQFENKKGLECLLHTWLLAQLTAVASNIGSEFNTLVL 444
+AEDD + AL ++ +EA+ F LH L T +IG T +
Sbjct: 811 TAEDDHLNALGVPLGMQDFDEALKGFTPAS-----LHNVSLQSSTIKFDSIGGLSETRRV 865
Query: 445 SNETL 449
ETL
Sbjct: 866 LLETL 870
>ASPGD|ASPL0000002697 [details] [associations]
symbol:pexA species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
Length = 1225
Score = 765 (274.4 bits), Expect = 4.2e-91, Sum P(5) = 4.2e-91
Identities = 156/315 (49%), Positives = 211/315 (66%)
Query: 763 DEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHE 822
D LD+A K DG+ DL +LV R + A+ R + S + I L DF A+
Sbjct: 774 DVDFLDLAGKTDGFMPGDLVLLVARARNEALIRSISEASDESRAI--ILGAADFDNAIKG 831
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
F P ++R++T TS+ + + +GGL + + + E ++ P+K+ IFAQ PLRLRS +L
Sbjct: 832 FTPASLRNVTLTSST---TTFSAIGGLHETRKMLLETLQYPTKYAPIFAQCPLRLRSGLL 888
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
LYG PGCGKT + A A C L FISVKGPE+LNKYIGASE++VRD+F +A AA PC+LF
Sbjct: 889 LYGYPGCGKTMLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERAQAARPCILF 948
Query: 943 FDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGR 1002
FDEFDSIAPKRGHD+TGVTDRVVNQ LT++DG E L+GV+V AATSRPDL+D ALLRPGR
Sbjct: 949 FDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPGR 1008
Query: 1003 LDRLLFCDFPSPRERLDILKVISRKLPLADDV--DLEAIAHMTEGFSGXXXXXXXXXXXX 1060
LD+ L CD P+ +R DI++ +S+KL ++++V ++ +A T GFSG
Sbjct: 1009 LDKSLLCDMPNHADRADIIRAVSKKLAMSNEVVARIDEVAARTAGFSGADLQAVVYNAHL 1068
Query: 1061 XXVHEILNNIDSNEP 1075
VH+ L + ++P
Sbjct: 1069 EAVHDALGDRSGDKP 1083
Score = 124 (48.7 bits), Expect = 4.2e-91, Sum P(5) = 4.2e-91
Identities = 40/129 (31%), Positives = 63/129 (48%)
Query: 65 IEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQ 124
+E+ F + L D V + + + A + IEPLT +DWE++EL++ E +L+Q
Sbjct: 100 VELDTTFGRFLGLGDGQRVGIFIHLDPPVAHTINIEPLTPEDWEIIELHATFLELNLLSQ 159
Query: 125 VRIV----HEAMR----FPLWLHGRTIITFHVVSTF-----PK-KPVVQLVPGTEVAVAP 170
+R + + A + PL LH T ++V T P P ++ P EV VAP
Sbjct: 160 IRALPNPTYTAAQADHMHPLTLHLSPTSTANIVITSLTPAPPSTSPFAKIAPDAEVIVAP 219
Query: 171 KRR-KNNVK 178
K R K N +
Sbjct: 220 KTRPKANTR 228
Score = 78 (32.5 bits), Expect = 4.2e-91, Sum P(5) = 4.2e-91
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPI--IRQALSN-FIS 649
+L+ G GSGKT+L + +A L+ K+ + ++ + C +L ++ I I++ L+ F+S
Sbjct: 558 VLVTGGLGSGKTALGQLLAHRLQ--KESLFNVKYFSCRKLVTDETRISNIKETLNRLFMS 615
Query: 650 EALDH---APSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
A S VI D+L ++ + ++ E+ S
Sbjct: 616 AAWCARLGGQSTVILDDLDKLCPVETELQVGGDNGRSRQNSEVICSMVREF-----CSMN 670
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEH 752
G + +A+AQS E + + F + L AP R+ +LE+
Sbjct: 671 SG-VVLLATAQSKESLNNVIVGGHVFREVIHLRAPDKEGRRKVLEY 715
Score = 64 (27.6 bits), Expect = 1.5e-08, Sum P(5) = 1.5e-08
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
F+ L L +L++G PG GKT LA AVA
Sbjct: 876 FAQCPLRLRSGLLLYGYPGCGKTMLASAVA 905
Score = 62 (26.9 bits), Expect = 4.2e-91, Sum P(5) = 4.2e-91
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 1094 RPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAK--GKRATL 1133
R S+SEAE+ RL +IY +F++ + A+ G R +L
Sbjct: 1183 RSSLSEAERRRLLAIYREFVEGRNGEMPNGEGAREVGGRTSL 1224
Score = 61 (26.5 bits), Expect = 1.5e-08, Sum P(5) = 1.5e-08
Identities = 23/96 (23%), Positives = 46/96 (47%)
Query: 706 GIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI 765
G+ + +A+ + I +L GR D + P ++R I+ + ++ L S+E+
Sbjct: 983 GLSGVYVLAATSRPDLIDPALLRPGRLDKSLLCDMPNHADRADIIR-AVSKK-LAMSNEV 1040
Query: 766 LL---DVASKCDGYDAYDLEILVDRT----VHAAVG 794
+ +VA++ G+ DL+ +V VH A+G
Sbjct: 1041 VARIDEVAARTAGFSGADLQAVVYNAHLEAVHDALG 1076
Score = 49 (22.3 bits), Expect = 4.2e-91, Sum P(5) = 4.2e-91
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 4 EVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSS 63
EV +V ++NC V+LP L+ L + A+ Q + +EL+ R R SG+T+ S
Sbjct: 11 EVALVS-LKNCLVNLPPSLVSLLVN---ANTPAQNVIVELQFRPTGR---TNSGSTTPRS 63
Score = 44 (20.5 bits), Expect = 8.7e-83, Sum P(5) = 8.7e-83
Identities = 14/66 (21%), Positives = 25/66 (37%)
Query: 221 VALTSVAFINPETAENVSLCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGAST 280
+ +TS+ P T+ + V + P+ K N + +SK +GG S+
Sbjct: 191 IVITSLTPAPPSTSPFAKIAPDAEVIVAPKTRPKANTRVSRGDNRSVTGSSKRSAGGRSS 250
Query: 281 DKKECR 286
R
Sbjct: 251 GGSTAR 256
Score = 39 (18.8 bits), Expect = 3.6e-06, Sum P(5) = 3.6e-06
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 642 QALSNFISEALDHAPSIVI----FDN 663
+AL ISEA D + +I++ FDN
Sbjct: 802 EALIRSISEASDESRAIILGAADFDN 827
>FB|FBgn0013563 [details] [associations]
symbol:Pex1 "Peroxin 1" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006625 "protein targeting to
peroxisome" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0021782 "glial cell development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:AE014296
GO:GO:0006200 GO:GO:0007422 GO:GO:0007417 GO:GO:0007031
GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0048137 UniGene:Dm.10724
GO:GO:0021782 GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 GeneTree:ENSGT00550000075032 EMBL:AY075423
RefSeq:NP_652016.1 SMR:Q9VUC7 IntAct:Q9VUC7 MINT:MINT-335404
STRING:Q9VUC7 EnsemblMetazoa:FBtr0075777 GeneID:45460
KEGG:dme:Dmel_CG6760 UCSC:CG6760-RA FlyBase:FBgn0013563
InParanoid:Q9VUC7 OMA:VLMWPSR OrthoDB:EOG4BNZSX GenomeRNAi:45460
NextBio:838158 Uniprot:Q9VUC7
Length = 1006
Score = 740 (265.6 bits), Expect = 9.2e-88, Sum P(3) = 9.2e-88
Identities = 193/551 (35%), Positives = 283/551 (51%)
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEA 651
++L+ G G+GKT L + + L D H F SR K I++ L N +
Sbjct: 479 NVLLAGASGTGKTVLVERILDQLSRKPDY-CHFEFFHGSRSKGRKTESIQKDLRNIFTSC 537
Query: 652 LDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIA 711
L HAP+IV+ +NL + + ++ +Y IA
Sbjct: 538 LQHAPAIVVLENLDVLAHAAGEQSSQDGEYYN-RMADTVYQLIVQYTTNNA-------IA 589
Query: 712 FVASAQSLEKIPQSLTSS-GRFDFHV--QLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+A+ L+ + + L+S GR F +LP ++R+ IL E+ D L+
Sbjct: 590 VIATVNELQTLNKRLSSPRGRHVFQTVARLPNLERADREIILR-ELCSHINVAKDLDLVK 648
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAM 828
++ +GY DL V+R + A Y S + +P L D +++ +
Sbjct: 649 FSNLTEGYRKCDLVQFVERAIFYA---YRISKT------QPLLTNDQLIESLEHTNSYCL 699
Query: 829 RDI-----TKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLL 883
+ I T A+ +++ GL + ++E++ PS++P IF +PLR ++ VLL
Sbjct: 700 QGIQSNQRTGNDADANEMRVEELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLL 759
Query: 884 YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFF 943
YGPPG GKT++V A + +LR ISVKGPELL KYIG SE+ VR++F++A +A PC+LFF
Sbjct: 760 YGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFF 819
Query: 944 DEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRL 1003
DEFDS+APKRGHD+TGVTDRVVNQ LTELDGVE L GV V AATSRP+LLD ALLR GR+
Sbjct: 820 DEFDSLAPKRGHDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRI 879
Query: 1004 DRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXV 1063
DRL+ C P R+ I + +S L L + VD + A T ++G V
Sbjct: 880 DRLVECPLPDAPARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAV 939
Query: 1064 HEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQS 1123
E L + K + L RPS+S ++ + + Y +F + +K+ S
Sbjct: 940 KEALAQFGHEKLAKKISLKQKHLIESFQTTRPSLSASDVAKYHRTYARFTNKEKT----S 995
Query: 1124 RDAKGKRATLA 1134
R+ KRATLA
Sbjct: 996 REFVAKRATLA 1006
Score = 152 (58.6 bits), Expect = 9.2e-88, Sum P(3) = 9.2e-88
Identities = 42/174 (24%), Positives = 83/174 (47%)
Query: 39 LSLELRSRSNQR-WVVAWSGATSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLV 97
LSL+ R++ W G + I + + A+ I L ++ +V+ ++++VL V
Sbjct: 36 LSLQYNGRTHYASWAPQKGGGGIKDTEIGINARAAKEIGLHENDLVKCALIADVLNLRSV 95
Query: 98 TIEPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPV 157
+ P++ DWE++EL++E ++L Q RIV+ +W++ + V P
Sbjct: 96 HVTPVSSKDWEIIELSTEKISGSVLEQTRIVNSTQILIVWINKSMQVALTVDRLKPHMNY 155
Query: 158 VQLVPGTEVAVAPKRRKNNVKKHEDSYMQAFNESTSIAKALLRVQDSDEGLSHK 211
++ TE+ VAP K + ++ E+T ++++ Q DE L+ K
Sbjct: 156 GRIDHNTELVVAPNLYKGLTNGTSNGVIE---ENTKLSRSKTTAQVKDE-LTEK 205
Score = 39 (18.8 bits), Expect = 9.2e-88, Sum P(3) = 9.2e-88
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 324 KKCTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLELDNKNHKTKKMLEKTSSGIYMDDGD 383
K VN ++I + + H+K++E AF ++ HK ML + ++D D
Sbjct: 337 KTTVVNFVEKIELFANKKTHYKIMEN--AFK-RFVIERTQHKP--MLFNQEEVVRLED-D 390
Query: 384 L 384
L
Sbjct: 391 L 391
Score = 39 (18.8 bits), Expect = 6.7e-74, Sum P(2) = 6.7e-74
Identities = 29/140 (20%), Positives = 53/140 (37%)
Query: 419 LLHTWL--LAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGALENK 476
+L W+ Q+ + N + + T L YK T G + NG +E
Sbjct: 131 ILIVWINKSMQVALTVDRLKPHMNYGRIDHNTELVVAPNLYKGLTNG----TSNGVIEEN 186
Query: 477 TKARELRT--EIFCVLTFSEESL-HGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGD 533
TK +T ++ LT L H + + T++ +Q++ + L + S
Sbjct: 187 TKLSRSKTTAQVKDELTEKLTPLTHSSTVSNVKNTIQRNKRQDHMERLKKDL--RRESSR 244
Query: 534 SVSFYTVKERGSTQGFDSNV 553
S F ++ Q +S+V
Sbjct: 245 SFEFRVIRGLWREQAQESDV 264
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 721 (258.9 bits), Expect = 8.2e-82, Sum P(3) = 8.2e-82
Identities = 164/399 (41%), Positives = 233/399 (58%)
Query: 738 LPAPAASERKAILEHEIQRRSL-ECSDEILL-DVASKCDGYDAYDLEILVDRTVHAAVGR 795
L AP R +LE+ + + + + ++ D++ + +G+ DLEI ++ +
Sbjct: 600 LRAPDKHARAKLLEYFFSKNQIMKLNRDLQFSDLSLETEGFSPLDLEIFTEKIFY----- 654
Query: 796 YLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNA 855
D E+ + R+ FS+++ F P A+R + T + W D+G L + ++
Sbjct: 655 ----DLQLERDCDNVVTRELFSKSLSAFTPSALRGVKLTKETNIK--WGDIGALANAKDV 708
Query: 856 IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELL 915
+ E +E P+K+ IF PLRLRS +LLYG PGCGKT + A A C L FISVKGPE+L
Sbjct: 709 LLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEIL 768
Query: 916 NKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGV 975
NK+IGASEQ +R++F +A + PC+LFFDEFDSIAPKRGHD+TGVTDRVVNQ LT++DG
Sbjct: 769 NKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGA 828
Query: 976 EVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVI---------SR 1026
E L GV++ AATSRPDL+D+ALLRPGRLD+ + C+ P+ ERLDIL+ I +
Sbjct: 829 EGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQK 888
Query: 1027 KLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITDALL 1086
K L + DL+ IA T GFSG VH L+ D +E +P +
Sbjct: 889 KFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVHRWLSAADQSEV--VPGNDNIEY 946
Query: 1087 KSIASKARPSVSEAEKLRLYSIYGQFL--DSKKSVAAQS 1123
SI R E +LRL ++ Q + ++K S +A S
Sbjct: 947 FSINEHGR---REENRLRLKTLLQQDVVHETKTSTSAAS 982
Score = 136 (52.9 bits), Expect = 8.2e-82, Sum P(3) = 8.2e-82
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 3 LEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVV--AWSGATS 60
L ++ + F+ LP +I LEST A Q + + S ++ +V W G S
Sbjct: 12 LRIQFSNAIVGNFLRLPHSIINVLESTNYAI---QEFGIAVHSHNSDIPIVHLGWDGHDS 68
Query: 61 SSS--FIEVARQFAECISLADHT-IVQVRV--VSNVLKATLVTIEPLTEDDWEVLELNSE 115
SS + + A L + +V + + + AT V + P T DDWE+++ N+
Sbjct: 69 GSSENVVLINPVLATVYDLNQKSPLVDLYIQRYDHTHLATEVYVTPETSDDWEIIDANAM 128
Query: 116 HAE-AAILNQVRIVHEAMRFPLWLHGRTIIT-FHVVSTFPKKPVVQLVPGTEVAVAPKRR 173
+ IL+Q RIV +L G I+T F + P ++ G+ V VAPK
Sbjct: 129 RFQNGEILHQTRIVTPGETLICYLEG--IVTKFKIDRVEPSMKSARITDGSLVVVAPKVN 186
Query: 174 KNNVKKHE 181
K + K E
Sbjct: 187 KTRLVKAE 194
Score = 68 (29.0 bits), Expect = 7.1e-09, Sum P(4) = 7.1e-09
Identities = 40/114 (35%), Positives = 55/114 (48%)
Query: 505 YELTLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTVKE-RGSTQGFDSNVSSLSW--MGT 561
Y+L LE R N T R+LF K S+S +T RG ++N+ W +G
Sbjct: 654 YDLQLE-RDCDNVVT---RELFSK-----SLSAFTPSALRGVKLTKETNIK---WGDIGA 701
Query: 562 TAS--DVINRIKVLLSPDS-GLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAK 612
A+ DV+ ++ L P F L L IL++G PG GKT LA AVA+
Sbjct: 702 LANAKDVL--LETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQ 753
Score = 63 (27.2 bits), Expect = 8.2e-82, Sum P(3) = 8.2e-82
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL----SLEKGPIIRQALSNFI 648
I++ G G GKT L K + +E KD + + C L +L+K ++ + +
Sbjct: 457 IILDGKQGIGKTRLLKELINEVE--KDHHIFVKYADCETLHETSNLDK---TQKLIMEWC 511
Query: 649 SEALDHAPSIVIFDNL 664
S + PS+++ DN+
Sbjct: 512 SFCYWYGPSLIVLDNV 527
Score = 61 (26.5 bits), Expect = 7.1e-09, Sum P(4) = 7.1e-09
Identities = 29/107 (27%), Positives = 49/107 (45%)
Query: 706 GIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI--------QRR 757
G+ + +A+ + I +L GR D V P SER IL+ + Q++
Sbjct: 830 GLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKK 889
Query: 758 -SLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-DSS 802
+LE + ++ L +A K G+ DL+ L +V R+L + D S
Sbjct: 890 FALEKNADLKL-IAEKTAGFSGADLQGLCYNAYLKSVHRWLSAADQS 935
Score = 53 (23.7 bits), Expect = 7.1e-09, Sum P(4) = 7.1e-09
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 1063 VHEILNNIDS-NEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
VHE + + +E + I D LL++ + +PS+S +E ++L IY +F
Sbjct: 971 VHETKTSTSAASELTAVVTIND-LLEA-CQETKPSISTSELVKLRGIYDRF 1019
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 833 KTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKT 892
K + E R+ D+ +T + + KEM+ + +P+ ++L G G GKT
Sbjct: 418 KETGEVSRTSKDEDDFIT-VNSIKKEMVN--------YLTSPIIATPAIILDGKQGIGKT 468
Query: 893 HIV 895
++
Sbjct: 469 RLL 471
Score = 40 (19.1 bits), Expect = 9.7e-72, Sum P(3) = 9.7e-72
Identities = 12/66 (18%), Positives = 31/66 (46%)
Query: 89 SNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHV 148
S +L +L+T + + ++E+ +E + N I +E++++ + G+ + +
Sbjct: 348 SKLLGGSLLTNNLILPTEQIIIEIKKGESEQQLCNLNEISNESVQWKVTQMGKEEVKDII 407
Query: 149 VSTFPK 154
PK
Sbjct: 408 ERHLPK 413
>POMBASE|SPCC553.03 [details] [associations]
symbol:pex1 "AAA family ATPase Pex1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
SMART:SM00382 PomBase:SPCC553.03 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464
GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12 PIR:T41400
RefSeq:NP_587770.1 ProteinModelPortal:O74941
EnsemblFungi:SPCC553.03.1 GeneID:2539405 KEGG:spo:SPCC553.03
OrthoDB:EOG4TQQJ3 NextBio:20800569 Uniprot:O74941
Length = 937
Score = 687 (246.9 bits), Expect = 1.4e-79, Sum P(2) = 1.4e-79
Identities = 145/413 (35%), Positives = 234/413 (56%)
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
I F+ + ++L F + LP+ A + RK IL Q + + + + +
Sbjct: 481 IIFIGFGEEFLTFSENLVLPLLFQIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEFI 540
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMR 829
+ K +GY DL + V R + A ++ + KH+ + + + + +F+P+ +R
Sbjct: 541 SVKTEGYLMTDLVLFVKRLLSEA---FVEKIQNGPKHL---MNKGLIEKTLKDFVPLQLR 594
Query: 830 DITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGC 889
K W D+ G+ + + A++++IE P K+ I+ Q LRL + +LL+G PGC
Sbjct: 595 ---KAKFVKSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGC 651
Query: 890 GKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSI 949
GKT++ A ++ ++FIS+KGPELL+KYIG SEQ VRD+FS+A A PC+LFFDEFDS+
Sbjct: 652 GKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSV 711
Query: 950 APKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFC 1009
AP+RG D+TGVTDRVVNQ LT++DG E L GV++ AAT+RPD++D ALLRPGRLD+L+FC
Sbjct: 712 APRRGQDSTGVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFC 771
Query: 1010 DFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNN 1069
D P+ ERL++L+ ++ + + + L+ ++ +T+G++ VH++L
Sbjct: 772 DLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKR 831
Query: 1070 IDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQ 1122
+ N + + SK S+ Y+ Q + KSV +
Sbjct: 832 VSINAVDPSQTTSSFTNLTTESKRNASMLALPPESRYNQNMQSMSDSKSVVIE 884
Score = 158 (60.7 bits), Expect = 1.4e-79, Sum P(2) = 1.4e-79
Identities = 42/172 (24%), Positives = 83/172 (48%)
Query: 11 VENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVARQ 70
+ +C V++P L+E++ + + V+ ++ + + SG S SF E+
Sbjct: 10 LRSCLVNVPELLLESISEPVQNYAVQAVVC---KNDIKKTFYFGISGIPSQFSF-EIDST 65
Query: 71 FAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVHE 130
+A + LA++ + + ++ + + IEP+T +DWE+ E N+ E +L Q R+
Sbjct: 66 YAHTLKLAENQEINLSIIDCTHEIEQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVA-T 124
Query: 131 AMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVKKHED 182
RF ++L T I F + P +L+ TEV + PK + ++ E+
Sbjct: 125 TERFIIYLPSGTFIQFQPLKLIPSSLCGRLLRTTEVLITPKPNTSAIEVKEN 176
Score = 91 (37.1 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 44/203 (21%), Positives = 81/203 (39%)
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHK-DLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
+I I+GP G GK++L ++ +++ + + + V CS + + +N +
Sbjct: 374 NIYINGPKGCGKSNLVHSL---FDYYSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQ 430
Query: 651 ALDHAPSIVIFDNLX-XXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A + PSI+ D++ IA FL + KRK
Sbjct: 431 AERYEPSIIYLDDVHCLISSSNENGELGFVEEREIA---FLQHQIINLKRKRK------- 480
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
I F+ + ++L F + LP+ A + RK IL Q + + + + +
Sbjct: 481 IIFIGFGEEFLTFSENLVLPLLFQIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEFI 540
Query: 770 ASKCDGYDAYDLEILVDRTVHAA 792
+ K +GY DL + V R + A
Sbjct: 541 SVKTEGYLMTDLVLFVKRLLSEA 563
Score = 77 (32.2 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 866 FPNIFAQA--PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFIS----VKGPELLNKYI 919
FP+ FAQ + L N+ + GP GCGK+++V + SL I V E+
Sbjct: 358 FPHEFAQVRNAVFLHQNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSF 417
Query: 920 GASEQAVRDIFSKATAAAPCLLFFDE 945
+ ++F +A P +++ D+
Sbjct: 418 AKFQSFWNNVFIQAERYEPSIIYLDD 443
Score = 70 (29.7 bits), Expect = 8.1e-10, Sum P(3) = 8.1e-10
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 554 SSLSWMGTTA-SDVINRIK-VLLSPDS-GLWFSTYHLPLPGHILIHGPPGSGKTSLAKAV 610
SS+ W+ + ++ ++ SP L + L LP IL+ G PG GKT LA A+
Sbjct: 601 SSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAI 660
Query: 611 AKS 613
+ +
Sbjct: 661 SST 663
Score = 53 (23.7 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 1069 NIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
N+ S K VI D +L K PS++ E L ++Y F
Sbjct: 871 NMQSMSDSKSVVIEDYMLMEALKKNSPSLNSEEFEHLSNLYRDF 914
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 704 (252.9 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 174/469 (37%), Positives = 256/469 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Score = 422 (153.6 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 91/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 44 (20.5 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 148 VVS-TFPKKPVVQLVPGTEVAVAPKRRKNNV 177
VVS + PK +QL G V + K+R+ V
Sbjct: 38 VVSLSQPKMDELQLFRGDTVLLKGKKRREAV 68
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 704 (252.9 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 174/469 (37%), Positives = 256/469 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Score = 422 (153.6 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 91/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 44 (20.5 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 148 VVS-TFPKKPVVQLVPGTEVAVAPKRRKNNV 177
VVS + PK +QL G V + K+R+ V
Sbjct: 38 VVSLSQPKMDELQLFRGDTVLLKGKKRREAV 68
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 704 (252.9 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 174/469 (37%), Positives = 256/469 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 254 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 307
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 308 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 356
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 357 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 414
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 415 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 474
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 475 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 531
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 532 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 591
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 592 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 651
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSG
Sbjct: 652 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 700
Score = 422 (153.6 bits), Expect = 2.6e-34, Sum P(4) = 2.6e-34
Identities = 91/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 218 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 277
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 278 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 337
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 338 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 397
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 398 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 447
Score = 44 (20.5 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 78 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 135
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 195 DTVIHCEGEPIKREDEE 211
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 148 VVS-TFPKKPVVQLVPGTEVAVAPKRRKNNV 177
VVS + PK +QL G V + K+R+ V
Sbjct: 54 VVSLSQPKMDELQLFRGDTVLLKGKKRREAV 84
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 704 (252.9 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 174/469 (37%), Positives = 256/469 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Score = 422 (153.6 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 91/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 44 (20.5 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 148 VVS-TFPKKPVVQLVPGTEVAVAPKRRKNNV 177
VVS + PK +QL G V + K+R+ V
Sbjct: 38 VVSLSQPKMDELQLFRGDTVLLKGKKRREAV 68
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 704 (252.9 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 174/469 (37%), Positives = 256/469 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Score = 422 (153.6 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 91/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 44 (20.5 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 148 VVS-TFPKKPVVQLVPGTEVAVAPKRRKNNV 177
VVS + PK +QL G V + K+R+ V
Sbjct: 38 VVSLSQPKMDELQLFRGDTVLLKGKKRREAV 68
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 704 (252.9 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 174/469 (37%), Positives = 256/469 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Score = 422 (153.6 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 91/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 44 (20.5 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
Score = 37 (18.1 bits), Expect = 3.9e-75, Sum P(4) = 3.9e-75
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 148 VVS-TFPKKPVVQLVPGTEVAVAPKRRKNNV 177
VVS + PK +QL G V + K+R+ V
Sbjct: 38 VVSLSQPKMDELQLFRGDTVLLKGKKRREAV 68
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 701 (251.8 bits), Expect = 9.0e-75, Sum P(4) = 9.0e-75
Identities = 173/469 (36%), Positives = 256/469 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++++++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSG 684
Score = 422 (153.6 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 91/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 44 (20.5 bits), Expect = 9.0e-75, Sum P(4) = 9.0e-75
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 9.0e-75, Sum P(4) = 9.0e-75
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
Score = 37 (18.1 bits), Expect = 9.0e-75, Sum P(4) = 9.0e-75
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 148 VVS-TFPKKPVVQLVPGTEVAVAPKRRKNNV 177
VVS + PK +QL G V + K+R+ V
Sbjct: 38 VVSLSQPKMDELQLFRGDTVLLKGKKRREAV 68
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 693 (249.0 bits), Expect = 8.1e-74, Sum P(4) = 8.1e-74
Identities = 174/471 (36%), Positives = 256/471 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLAD--DVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSG 686
Score = 422 (153.6 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
Identities = 91/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 44 (20.5 bits), Expect = 8.1e-74, Sum P(4) = 8.1e-74
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 8.1e-74, Sum P(4) = 8.1e-74
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
Score = 37 (18.1 bits), Expect = 8.1e-74, Sum P(4) = 8.1e-74
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 148 VVS-TFPKKPVVQLVPGTEVAVAPKRRKNNV 177
VVS + PK +QL G V + K+R+ V
Sbjct: 38 VVSLSQPKMDELQLFRGDTVLLKGKKRREAV 68
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 704 (252.9 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 175/490 (35%), Positives = 260/490 (53%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P ++ R IL+ I ++++ SD++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKLSDDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXX 1059
PGRLD+L++ P + R+ ILK RK P+A DVDL+ +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRAC 695
Query: 1060 XXXVHEILNN 1069
+ E + N
Sbjct: 696 KLAIRESIEN 705
Score = 419 (152.6 bits), Expect = 2.3e-34, Sum P(3) = 2.3e-34
Identities = 90/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + L+DDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 44 (20.5 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 704 (252.9 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 171/469 (36%), Positives = 255/469 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
E +AP+I+ D L + L+ +MD G K+++
Sbjct: 292 ETEKNAPAIIFIDELDAIASDDCFPSPQTHGEVERRIVSQLLTLMD--GLKQRAH----- 344
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 345 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 402
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 403 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 462
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 463 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 519
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 520 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 579
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 580 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 639
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDL+ +A MT GFSG
Sbjct: 640 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSG 688
Score = 384 (140.2 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 88/234 (37%), Positives = 126/234 (53%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR---GHDNT 958
F + GPE+++K G SE +R F + AP ++F DE D+IA
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQTH 321
Query: 959 G-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
G V R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P R
Sbjct: 322 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 381
Query: 1018 LDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
L+IL++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 382 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 435
Score = 44 (20.5 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 704 (252.9 bits), Expect = 1.0e-72, Sum P(3) = 1.0e-72
Identities = 174/490 (35%), Positives = 261/490 (53%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P ++ R IL+ I ++++ SD++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKLSDDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ + VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXX 1059
PGRLD+L++ P + R+ ILK RK P+A DVD++ +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRAC 695
Query: 1060 XXXVHEILNN 1069
+ E + N
Sbjct: 696 KLAIRESIEN 705
Score = 419 (152.6 bits), Expect = 2.9e-34, Sum P(3) = 2.9e-34
Identities = 90/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + L+DDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 43 (20.2 bits), Expect = 1.0e-72, Sum P(3) = 1.0e-72
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKC 326
K+ R+AV +L D+ + +++ R +R L L + ++ C
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC 105
Score = 37 (18.1 bits), Expect = 1.0e-72, Sum P(3) = 1.0e-72
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 641 (230.7 bits), Expect = 7.7e-72, Sum P(4) = 7.7e-72
Identities = 140/349 (40%), Positives = 204/349 (58%)
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 339 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 396
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 397 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 456
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 457 SNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 513
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 514 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 573
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 574 FDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 633
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R+ ILK RK P+A DVDL+ +A MT GFSG
Sbjct: 634 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSG 682
Score = 351 (128.6 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 83/230 (36%), Positives = 117/230 (50%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G E A R S A F D + H V
Sbjct: 262 TGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPSPQTHGE--VE 319
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 320 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 379
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 380 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 429
Score = 76 (31.8 bits), Expect = 7.7e-72, Sum P(4) = 7.7e-72
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 590 PGHILIHGPPGSGKTSLAKAVA 611
P IL++GPPG+GKT +A+AVA
Sbjct: 238 PRGILLYGPPGTGKTLIARAVA 259
Score = 44 (20.5 bits), Expect = 7.7e-72, Sum P(4) = 7.7e-72
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 283 KECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSL 339
K+ R+AV +L D+ + +++ R +R L L + ++ C V K I ++ +
Sbjct: 62 KKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Score = 37 (18.1 bits), Expect = 7.7e-72, Sum P(4) = 7.7e-72
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 645 (232.1 bits), Expect = 2.9e-71, Sum P(4) = 2.9e-71
Identities = 171/477 (35%), Positives = 248/477 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 241 FKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 298
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A EA ++PSI+ D + V L + +MD G K
Sbjct: 299 KAFE----EAEKNSPSIIFIDEIDSIAPKRDKTNGEVERRVVSQL----LTLMD--GMKA 348
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P A R IL I ++++
Sbjct: 349 RSN-----VVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILR--IHTKNMKL 401
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ +AS+ G+ D+ L + + + + + + +L +D
Sbjct: 402 ADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGVTQD 461
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R+ T E WDD+GGL +I+N +KE +E P P+ + +
Sbjct: 462 NFRFALGNSNPSALRE---TVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFG 518
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
L VL +GPPG GKT + A A S FISVKGPELL+ + G SE +RDIF KA
Sbjct: 519 LAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKAR 578
Query: 935 AAAPCLLFFDEFDSIAPKRG--H-DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAAP ++F DE DSIA RG H D G +DRVVNQ LTE+DG+ VFV AT+RPD
Sbjct: 579 AAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPD 638
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+D ALLRPGRLD+L++ P RL IL+ R PL +DL IA +T GFSG
Sbjct: 639 QIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSG 695
Score = 446 (162.1 bits), Expect = 4.5e-40, Sum P(4) = 4.5e-40
Identities = 94/233 (40%), Positives = 133/233 (57%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 213 GYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANE 272
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 273 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVE 332
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 333 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEIL 392
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNE 1074
++ ++ + LADDVDLEAIA T GF G + E ++ ID E
Sbjct: 393 RIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE 445
Score = 66 (28.3 bits), Expect = 2.9e-71, Sum P(4) = 2.9e-71
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 1067 LNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDA 1126
++ ++ +P +P IT A + A+ SVS+AE LR Y Y Q L + + + R
Sbjct: 739 VDEVEEEDP--VPYITRAHFEEAMKTAKRSVSDAE-LRRYESYAQQLQASRGQFSSFRFN 795
Query: 1127 KGKRAT 1132
+ AT
Sbjct: 796 ENAGAT 801
Score = 42 (19.8 bits), Expect = 2.9e-71, Sum P(4) = 2.9e-71
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 386 AEDDIIAALSSEPSSKEDEE 405
A+D II EP ++EDEE
Sbjct: 188 AQDTIIHC-EGEPINREDEE 206
Score = 39 (18.8 bits), Expect = 2.9e-71, Sum P(4) = 2.9e-71
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 157 VVQLVPGTEVAVAPKRRKNNVK--KHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKC 212
++QL G V V K+RK+ V +D + LRV+ D H C
Sbjct: 59 LLQLFRGDTVLVKGKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRVRLGDIVTVHPC 116
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 645 (232.1 bits), Expect = 2.9e-71, Sum P(4) = 2.9e-71
Identities = 171/477 (35%), Positives = 248/477 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 241 FKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 298
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A EA ++PSI+ D + V L + +MD G K
Sbjct: 299 KAFE----EAEKNSPSIIFIDEIDSIAPKRDKTNGEVERRVVSQL----LTLMD--GMKA 348
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P A R IL I ++++
Sbjct: 349 RSN-----VVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILR--IHTKNMKL 401
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ +AS+ G+ D+ L + + + + + + +L +D
Sbjct: 402 ADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLGVTQD 461
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R+ T E WDD+GGL +I+N +KE +E P P+ + +
Sbjct: 462 NFRFALGNSNPSALRE---TVVENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFG 518
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
L VL +GPPG GKT + A A S FISVKGPELL+ + G SE +RDIF KA
Sbjct: 519 LAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKAR 578
Query: 935 AAAPCLLFFDEFDSIAPKRG--H-DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAAP ++F DE DSIA RG H D G +DRVVNQ LTE+DG+ VFV AT+RPD
Sbjct: 579 AAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPD 638
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+D ALLRPGRLD+L++ P RL IL+ R PL +DL IA +T GFSG
Sbjct: 639 QIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSG 695
Score = 446 (162.1 bits), Expect = 4.5e-40, Sum P(4) = 4.5e-40
Identities = 94/233 (40%), Positives = 133/233 (57%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 213 GYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANE 272
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 273 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVE 332
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 333 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEIL 392
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNE 1074
++ ++ + LADDVDLEAIA T GF G + E ++ ID E
Sbjct: 393 RIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE 445
Score = 66 (28.3 bits), Expect = 2.9e-71, Sum P(4) = 2.9e-71
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 1067 LNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDA 1126
++ ++ +P +P IT A + A+ SVS+AE LR Y Y Q L + + + R
Sbjct: 739 VDEVEEEDP--VPYITRAHFEEAMKTAKRSVSDAE-LRRYESYAQQLQASRGQFSSFRFN 795
Query: 1127 KGKRAT 1132
+ AT
Sbjct: 796 ENAGAT 801
Score = 42 (19.8 bits), Expect = 2.9e-71, Sum P(4) = 2.9e-71
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 386 AEDDIIAALSSEPSSKEDEE 405
A+D II EP ++EDEE
Sbjct: 188 AQDTIIHC-EGEPINREDEE 206
Score = 39 (18.8 bits), Expect = 2.9e-71, Sum P(4) = 2.9e-71
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 157 VVQLVPGTEVAVAPKRRKNNVK--KHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKC 212
++QL G V V K+RK+ V +D + LRV+ D H C
Sbjct: 59 LLQLFRGDTVLVKGKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRVRLGDIVTVHPC 116
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 697 (250.4 bits), Expect = 9.1e-70, Sum P(2) = 9.1e-70
Identities = 167/474 (35%), Positives = 260/474 (54%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q F L H PSI+ D L V +L + +MD G +
Sbjct: 437 QI---FAEATLRH-PSIIFIDELDALCPKREGAQNEVEKRVVASL----LTLMDGIGSEG 488
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
G + + + + +L GRFD +++ P A++R IL+ +QR
Sbjct: 489 SE----GQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLH-----SDSSFEKHIKPTLVRDDF 816
++ LL +A+ GY DL+ L + A+ R L+ SDS +K TL +DF
Sbjct: 545 TEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQPNLSDSKMAGLVKITL--NDF 602
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
Q M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F + ++
Sbjct: 603 LQGMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQ 659
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 937 APCLLFFDEFDSIAPKRGHDN-TG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
+P ++FFDE D++A +RG + G V DRV+ Q LTE+DG+E L V + AAT+RPD +D
Sbjct: 720 SPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRID 779
Query: 995 AALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
AL+RPGR+DR+++ P R +IL + +P+++DV+L+ + T+ +SG
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSG 833
Score = 392 (143.0 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 96/262 (36%), Positives = 142/262 (54%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL+ AI+E+IELP K P +F + VLLYGPPG GKT I A A
Sbjct: 352 YDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEV 411
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR V
Sbjct: 412 GAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEK 471
Query: 963 RVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
RVV LT +DG+ E G V V AT+RP LDAAL RPGR D+ + P+ +RLD
Sbjct: 472 RVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLD 531
Query: 1020 ILKVISRKLP-LADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILN---NI-DSNE 1074
IL+ + +++P L +V+L +A+ G+ G + +LN N+ DS
Sbjct: 532 ILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQPNLSDSKM 591
Query: 1075 PGKMPVITDALLKSIASKARPS 1096
G + + + L+ + + RPS
Sbjct: 592 AGLVKITLNDFLQGM-NDIRPS 612
Score = 41 (19.5 bits), Expect = 9.1e-70, Sum P(2) = 9.1e-70
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 446 NETLLHFEVKGYKSGTYGKVPASCNGALENKTKARELRTEIFCVLTFSEESLHGGKNNAY 505
NE L++ E + KS G A CN + + R V T SEE ++N +
Sbjct: 299 NEQLIN-EERLLKSACVG---AKCNTDIFYFISSTT-RINFIKVHTNSEE-----EDNQF 348
Query: 506 ELTLEARGQQNNNTEAVRQL 525
++T + G ++ +A+R++
Sbjct: 349 KVTYDMIGGLSSQLKAIREI 368
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 699 (251.1 bits), Expect = 1.4e-69, Sum P(2) = 1.4e-69
Identities = 174/490 (35%), Positives = 259/490 (52%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 238 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 291
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 292 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 340
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD V + P A+ R IL+ I ++++ +D++ L+
Sbjct: 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKLADDVDLEQ 398
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++ G+ DL L A+ + + D + + + +L DDF A+ +
Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E W+D+GGL D++ ++E+++ P + P+ F + + VL
Sbjct: 459 SNPSALRE---TVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVL 515
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA AAPC+LF
Sbjct: 516 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF 575
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 576 FDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILR 635
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXX 1059
PGRLD+L++ P + R+ ILK RK P++ DVDL+ +A MT GFSG
Sbjct: 636 PGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRAC 695
Query: 1060 XXXVHEILNN 1069
+ E + N
Sbjct: 696 KLAIRESIEN 705
Score = 424 (154.3 bits), Expect = 6.7e-35, Sum P(2) = 6.7e-35
Identities = 91/230 (39%), Positives = 131/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G G + + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
Score = 37 (18.1 bits), Expect = 1.4e-69, Sum P(2) = 1.4e-69
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D + EP +EDEE
Sbjct: 179 DTVIHCEGEPIKREDEE 195
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 671 (241.3 bits), Expect = 2.2e-69, Sum P(2) = 2.2e-69
Identities = 171/510 (33%), Positives = 262/510 (51%)
Query: 579 GLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP 638
GL F T + P +L++GPPGSGKT +A+AVA L+ + S+++ E
Sbjct: 231 GL-FKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVM--SKMAGEAEA 287
Query: 639 IIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYG 698
+R+A EA ++P+I+ D + V L + +MD G
Sbjct: 288 NLRRAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--G 337
Query: 699 EKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRS 758
K + G + +A+ I +L GRFD + + P + R IL I ++
Sbjct: 338 IKSR-----GQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILR--IHTKN 390
Query: 759 LECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL-- 811
++ S ++ L+ +AS G+ DL L + + D +K + ++
Sbjct: 391 MKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCV 450
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
+D F+ A+ P ++R+ T E WDD+GGL ++++ ++EMI P P+ F
Sbjct: 451 TQDHFNMALGTCNPSSLRE---TVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFE 507
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
+ + VL YGPPGCGKT + A A+ CS F+S+KGPELL + G SE VR++F
Sbjct: 508 KFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFD 567
Query: 932 KATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATS 988
KA AAAPC+LFFDE DSI +RG D +G DRV+NQ LTE+DGV +F AT+
Sbjct: 568 KARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATN 627
Query: 989 RPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RP+LLD ALLRPGRLD+L++ P R+ IL I RK P+A++V ++ +A T GFSG
Sbjct: 628 RPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSG 687
Query: 1049 XXXXXXXXXXXXXXVHEILNNIDSNEPGKM 1078
+ + ++ + N+ K+
Sbjct: 688 ADLAELCQRAARAAIRDAIDAEEMNKKSKL 717
Score = 401 (146.2 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 90/230 (39%), Positives = 126/230 (54%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+EMIELP + P +F ++ VLLYGPPG GKT I A A
Sbjct: 205 GYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G +E +R F +A +P ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ V V AAT+R + +D AL R GR DR + P R +IL
Sbjct: 325 RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEIL 384
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + L+ DV LE +A T GF G + E ++ ID
Sbjct: 385 RIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVID 434
Score = 65 (27.9 bits), Expect = 2.2e-69, Sum P(2) = 2.2e-69
Identities = 38/175 (21%), Positives = 76/175 (43%)
Query: 248 LPRLSSKENNPENNAPRIKSNLTSKEIS---GGASTDKKECRQAVVHLLFSDS-VAKGHV 303
L RL +E ++N+ + +E++ G K + R + + ++ +D+ + +G +
Sbjct: 26 LSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTIIIKGKKRHSTICIILNDNDLDEGKI 85
Query: 304 KIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSLSPCHFKMLEKDKAFGIGLE-LDN 361
+I + R L L VY+K C + K+I ++ + + L KD F I L+ N
Sbjct: 86 RINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVLPIDDT-IEGLAKDTLFEIFLKPYFN 144
Query: 362 KNHKTKKM--LEKTSSG--------IYMDDGDLS-AEDDIIAALSSEPSSKEDEE 405
++++ K L G + +D D D + +P ++DEE
Sbjct: 145 ESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEE 199
Score = 44 (20.5 bits), Expect = 3.6e-67, Sum P(2) = 3.6e-67
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 255 ENNPENNAPRIKSNLTSKEISGGASTD 281
ENN EN P+ K NL S+ I A+ D
Sbjct: 13 ENNGENKVPK-KKNL-SRLIVEEATND 37
Score = 39 (18.8 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 99 IEPLTEDDWEVLELNSEHAE 118
+E T DD V+ LN++ E
Sbjct: 31 VEEATNDDNSVVALNTKRME 50
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 671 (241.3 bits), Expect = 2.2e-69, Sum P(2) = 2.2e-69
Identities = 171/510 (33%), Positives = 262/510 (51%)
Query: 579 GLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP 638
GL F T + P +L++GPPGSGKT +A+AVA L+ + S+++ E
Sbjct: 231 GL-FKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVM--SKMAGEAEA 287
Query: 639 IIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYG 698
+R+A EA ++P+I+ D + V L + +MD G
Sbjct: 288 NLRRAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--G 337
Query: 699 EKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRS 758
K + G + +A+ I +L GRFD + + P + R IL I ++
Sbjct: 338 IKSR-----GQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILR--IHTKN 390
Query: 759 LECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL-- 811
++ S ++ L+ +AS G+ DL L + + D +K + ++
Sbjct: 391 MKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCV 450
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
+D F+ A+ P ++R+ T E WDD+GGL ++++ ++EMI P P+ F
Sbjct: 451 TQDHFNMALGTCNPSSLRE---TVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFE 507
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
+ + VL YGPPGCGKT + A A+ CS F+S+KGPELL + G SE VR++F
Sbjct: 508 KFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFD 567
Query: 932 KATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATS 988
KA AAAPC+LFFDE DSI +RG D +G DRV+NQ LTE+DGV +F AT+
Sbjct: 568 KARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATN 627
Query: 989 RPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RP+LLD ALLRPGRLD+L++ P R+ IL I RK P+A++V ++ +A T GFSG
Sbjct: 628 RPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSG 687
Query: 1049 XXXXXXXXXXXXXXVHEILNNIDSNEPGKM 1078
+ + ++ + N+ K+
Sbjct: 688 ADLAELCQRAARAAIRDAIDAEEMNKKSKL 717
Score = 401 (146.2 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 90/230 (39%), Positives = 126/230 (54%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+EMIELP + P +F ++ VLLYGPPG GKT I A A
Sbjct: 205 GYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G +E +R F +A +P ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ V V AAT+R + +D AL R GR DR + P R +IL
Sbjct: 325 RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEIL 384
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + L+ DV LE +A T GF G + E ++ ID
Sbjct: 385 RIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVID 434
Score = 65 (27.9 bits), Expect = 2.2e-69, Sum P(2) = 2.2e-69
Identities = 38/175 (21%), Positives = 76/175 (43%)
Query: 248 LPRLSSKENNPENNAPRIKSNLTSKEIS---GGASTDKKECRQAVVHLLFSDS-VAKGHV 303
L RL +E ++N+ + +E++ G K + R + + ++ +D+ + +G +
Sbjct: 26 LSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTIIIKGKKRHSTICIILNDNDLDEGKI 85
Query: 304 KIARALRLYLNAGLHSWVYLKKCT-VNLKKEIPMVSLSPCHFKMLEKDKAFGIGLE-LDN 361
+I + R L L VY+K C + K+I ++ + + L KD F I L+ N
Sbjct: 86 RINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVLPIDDT-IEGLAKDTLFEIFLKPYFN 144
Query: 362 KNHKTKKM--LEKTSSG--------IYMDDGDLS-AEDDIIAALSSEPSSKEDEE 405
++++ K L G + +D D D + +P ++DEE
Sbjct: 145 ESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEE 199
Score = 44 (20.5 bits), Expect = 3.6e-67, Sum P(2) = 3.6e-67
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 255 ENNPENNAPRIKSNLTSKEISGGASTD 281
ENN EN P+ K NL S+ I A+ D
Sbjct: 13 ENNGENKVPK-KKNL-SRLIVEEATND 37
Score = 39 (18.8 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 99 IEPLTEDDWEVLELNSEHAE 118
+E T DD V+ LN++ E
Sbjct: 31 VEEATNDDNSVVALNTKRME 50
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 657 (236.3 bits), Expect = 1.2e-67, Sum P(3) = 1.2e-67
Identities = 183/561 (32%), Positives = 280/561 (49%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 307
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D + V L + +MD G K
Sbjct: 308 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 357
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 358 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILR--IHTKNMKL 410
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ +A++ GY DL L + + + + + +L D
Sbjct: 411 ADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMD 470
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R+ T E W+D+GGL +++ ++E +++P + F +
Sbjct: 471 NFRFALGSSNPSALRE---TVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFG 527
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL +GPPG GKT + A A CS FISVKGPELL+ + G SE VRDIF KA
Sbjct: 528 VTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKAR 587
Query: 935 AAAPCLLFFDEFDSIAPKRGHD--NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDL 992
AAAPC++F DE DSIA RG ++G DRVVNQ LTE+DGV VFV AT+RPD
Sbjct: 588 AAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQ 647
Query: 993 LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXX 1052
+D AL+RPGRLD+L++ P R IL+ R P+A+DVDL A+A T GFSG
Sbjct: 648 IDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLE 707
Query: 1053 XXXXXXXXXXVHE-ILNNID-SNEPGKMPVITDALLK---SIASKARPSVSEAEKLRLYS 1107
+ + I +I NE G+ P D ++ S++ R V EA K+ S
Sbjct: 708 FVVQRAVKLAIKDSIEEDIKRENETGEAPA-DDVVMDEDASVSQVQRHHVEEAMKMARRS 766
Query: 1108 IYGQFLDSKKSVAAQSRDAKG 1128
+ + ++ A Q ++G
Sbjct: 767 VSDAEVRRYEAYAHQLLTSRG 787
Score = 448 (162.8 bits), Expect = 7.3e-38, Sum P(3) = 7.3e-38
Identities = 99/261 (37%), Positives = 144/261 (55%)
Query: 825 PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLY 884
P+ D + AE G+DD+GG I+E++ELP + P +F ++ +L+Y
Sbjct: 208 PINREDEESSLAE---VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMY 264
Query: 885 GPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFD 944
GPPG GKT + A A F + GPE+++K G SE +R F +A +P ++F D
Sbjct: 265 GPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFID 324
Query: 945 EFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLD 1004
E DSIAPKR N V RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR D
Sbjct: 325 EIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFD 384
Query: 1005 RLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVH 1064
R + P P RL+IL++ ++ + LADDVDLE IA T G+ G +
Sbjct: 385 REVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIR 444
Query: 1065 EILNNIDSNEPGKMPVITDAL 1085
E ++ ID +E + D+L
Sbjct: 445 EKMDMIDLDEDEIDAEVLDSL 465
Score = 42 (19.8 bits), Expect = 1.2e-67, Sum P(3) = 1.2e-67
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 380 DDGDLSAEDDIIAALSSEPSSKEDEEA 406
D+ + ++D II EP ++EDEE+
Sbjct: 191 DEFGIVSQDTIIH-WEGEPINREDEES 216
Score = 41 (19.5 bits), Expect = 1.2e-67, Sum P(3) = 1.2e-67
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 158 VQLVPGTEVAVAPKRRKNNV 177
+QL G V V KRRK+ V
Sbjct: 69 LQLFRGDTVVVKGKRRKDTV 88
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 690 (248.0 bits), Expect = 2.8e-67, P = 2.8e-67
Identities = 167/474 (35%), Positives = 257/474 (54%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q F L H PSI+ D L V +L + +MD G +
Sbjct: 437 QI---FAEATLRH-PSIIFIDELDALCPKREGAQSEVEKRVVASL----LTLMDGIGSEG 488
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
G + + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 489 SE----GRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDF 816
+ LL +A+ GY DL+ L + A+ R L DS +K TL +DF
Sbjct: 545 TKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITL--NDF 602
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
Q M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F + ++
Sbjct: 603 LQGMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQ 659
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 937 APCLLFFDEFDSIAPKRGHDN-TG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
AP ++FFDE D++A +RG + G V DRV+ Q LTE+DG+E L V V AAT+RPD +D
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Query: 995 AALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
AL+RPGR+DR+++ P R +IL + +P++++VDL+ + T+ +SG
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSG 833
Score = 388 (141.6 bits), Expect = 3.6e-32, P = 3.6e-32
Identities = 116/357 (32%), Positives = 174/357 (48%)
Query: 757 RSLECSDEILLDVA-SKCDGYDAYDLEILVDRTVHAAVGRYLHSDS-SFEKHIKP----T 810
R++ + E+LLDV S DG LE + ++ S EK +KP T
Sbjct: 258 RTVNKAGEVLLDVTQSPRDG-SGLGLEESTGLKCSFDSSKEGNTQPVSEEKLLKPASAGT 316
Query: 811 LVRDDFSQAMHEFLPVAMRDITKTSAEGG---RSGWDDVGGLTDIQNAIKEMIELPSKFP 867
D + + +R I S E + +D +GGL AI+E+IELP K P
Sbjct: 317 KSNTDTFYFISSTTRINLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQP 376
Query: 868 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 927
+F + +LLYGPPG GKT I A A + GPE+++K+ G +E +R
Sbjct: 377 ELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLR 436
Query: 928 DIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGV--EVLTG-VFVF 984
IF++AT P ++F DE D++ PKR + V RVV LT +DG+ E G V V
Sbjct: 437 QIFAEATLRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVL 496
Query: 985 AATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLP-LADDVDLEAIAHMT 1043
AT+RP LDAAL RPGR D+ + P+ ++RLDIL+ + R++P L +L +A+
Sbjct: 497 GATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNA 556
Query: 1044 EGFSGXXXXXXXXXXXXXXVHEILN---NI-DSNEPGKMPVITDALLKSIASKARPS 1096
G+ G + +L N+ DS G + + + L+ + + RPS
Sbjct: 557 HGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITLNDFLQGM-NDIRPS 612
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 687 (246.9 bits), Expect = 6.0e-67, P = 6.0e-67
Identities = 164/472 (34%), Positives = 253/472 (53%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEAKLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q F L H PSI+ D L V +L + +MD G
Sbjct: 437 QI---FAEATLRH-PSIIFIDELDALCPKREGAQNEVEKRVVASL----LTLMDGIG--- 485
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR---DDFSQ 818
++ LL +A+ GY DL++L + A+ R L + LV+ DF Q
Sbjct: 545 TEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLKDFLQ 604
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
AM++ P AMR+I + + W D+GGL I+ +++ +E P K P F + ++
Sbjct: 605 AMNDIRPSAMREI---AIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPP 661
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+ F KA A AP
Sbjct: 662 KGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAP 721
Query: 939 CLLFFDEFDSIAPKRGHD-NTG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 996
++FFDE D++A +RG G V DRV+ Q LTE+DG+E L V + AAT+RPD +D A
Sbjct: 722 SIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKA 781
Query: 997 LLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
L+RPGR+DR+++ P R +I K+ +P++++VDL+ + T+ +SG
Sbjct: 782 LMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSG 833
Score = 396 (144.5 bits), Expect = 4.8e-33, P = 4.8e-33
Identities = 120/364 (32%), Positives = 179/364 (49%)
Query: 698 GEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQR 756
G + S +AF S+ + SL S + D Q+P ++ K I + I
Sbjct: 205 GPQSDSDTDAQRMAFEQSSMETSSLELSLQLS-QLDLEDTQIPTSRSTPYKPI-DDRITN 262
Query: 757 RSLECSDEILLDVA-SKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDD 815
++ SD +LLDV S DG LE + + R + + E+ + +
Sbjct: 263 KA---SD-VLLDVTQSPGDG-SGLMLEEVTGLKCNFESAREGNEQLTEEERLLKFSIGAK 317
Query: 816 FSQAMHEFLPVAMR----DITKTSAEGGRS---GWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ F+ R +I K S E +D +GGL+ AI+E+IELP K P
Sbjct: 318 CNTDTFYFISSTTRVNFTEIDKNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPE 377
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
+F + VLLYGPPG GKT I A A + GPE+++K+ G +E +R
Sbjct: 378 LFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQ 437
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGV--EVLTG-VFVFA 985
IF++AT P ++F DE D++ PKR V RVV LT +DG+ EV G V V
Sbjct: 438 IFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLG 497
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLP-LADDVDLEAIAHMTE 1044
AT+RP LDAAL RPGR D+ + P+ ++RLDIL+ + R++P L + +L +A+
Sbjct: 498 ATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAH 557
Query: 1045 GFSG 1048
G+ G
Sbjct: 558 GYVG 561
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 641 (230.7 bits), Expect = 9.0e-67, Sum P(3) = 9.0e-67
Identities = 167/477 (35%), Positives = 246/477 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 251 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 308
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D + V L + +MD G K
Sbjct: 309 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 358
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 359 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILS--IHTKNMKL 411
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+++ L+ +A++ GY DL L + + + + + + +L +
Sbjct: 412 GEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTME 471
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R++ R W+D+GGL +++ + E ++ P P F +
Sbjct: 472 NFRYALGVSNPSALREVAVVEVPNVR--WEDIGGLEEVKRELIESVQYPVDHPEKFQKFG 529
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
L VL YGPPG GKT + A A C+ FISVKGPELL+ + G SE +RDIF KA
Sbjct: 530 LSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKAR 589
Query: 935 AAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAAPC++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV AT+RP+
Sbjct: 590 AAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPE 649
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LDAAL+RPGRLD L++ P R ILK RK P+A DVD+E IA T GFSG
Sbjct: 650 QLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSG 706
Score = 437 (158.9 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 93/244 (38%), Positives = 136/244 (55%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 223 GYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 282
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 283 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 342
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P P RL+IL
Sbjct: 343 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 402
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVI 1081
+ ++ + L +DVDLE IA T G+ G + E ++ ID +E +
Sbjct: 403 SIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEV 462
Query: 1082 TDAL 1085
D+L
Sbjct: 463 LDSL 466
Score = 145 (56.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 58/226 (25%), Positives = 95/226 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL-SLEKGPII 640
F + L +L +GPPG+GKT LAKAVA + A+ + V L S+ G
Sbjct: 525 FQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN------ECAANFISVKGPELLSMWFGES- 577
Query: 641 RQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEK 700
+ + +A AP +V D L + + L + MD K
Sbjct: 578 ESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTE-MDGMTSK 636
Query: 701 RKSSCGIGPIAFVASAQSL-EKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
+ FV A + E++ +L GR D V +P P + R+ IL+ ++ R++
Sbjct: 637 KN--------VFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQL-RKTP 687
Query: 760 ECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 805
SD + +ASK G+ DL + R V A+ + ++ +K
Sbjct: 688 VASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAEIERQK 733
Score = 53 (23.7 bits), Expect = 9.0e-67, Sum P(3) = 9.0e-67
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 1070 IDSNEPGKMPV--ITDALLKSIASKARPSVSEAEKLRLYSIYGQFL 1113
++ E G+ PV +T A + AR SVS+ E +R Y + Q L
Sbjct: 744 MEDEEEGEDPVPELTRAHFEEAMKTARRSVSDVE-IRRYEAFAQSL 788
Score = 40 (19.1 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1077 KMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAKGKRA 1131
K PV +D ++ IASK S A+ L + L K+S++A+ K + A
Sbjct: 685 KTPVASDVDIEFIASKTH-GFSGAD-LGFVTQRAVKLAIKESISAEIERQKQREA 737
Score = 39 (18.8 bits), Expect = 9.0e-67, Sum P(3) = 9.0e-67
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 386 AEDDIIAALSSEPSSKEDEE 405
A D II + EP +EDEE
Sbjct: 198 APDTIIHS-EGEPIQREDEE 216
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 640 (230.4 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
Identities = 169/477 (35%), Positives = 245/477 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P +L++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 240 FKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVM--SKMAGESESNLR 297
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D + V L + +MD G K
Sbjct: 298 KAFE----EAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQL----LTLMD--GMKA 347
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P A+ R +L I ++++
Sbjct: 348 RSN-----VVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLR--IHTKNMKL 400
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ +A++ GY D+ L + + + + + +L D
Sbjct: 401 ADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMD 460
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R+ T E WDDVGGL +I+ +KE +E P P+ + +
Sbjct: 461 NFRFALGNSNPSALRE---TVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFG 517
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
L VL YGPPG GKT + A A S FISVKGPELL+ + G SE +RDIF KA
Sbjct: 518 LSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKAR 577
Query: 935 AAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAAP ++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV AT+RPD
Sbjct: 578 AAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPD 637
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+D A+LRPGRLD+L++ P RL IL RK PL ++L AIA T+GFSG
Sbjct: 638 QIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSG 694
Score = 446 (162.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 96/244 (39%), Positives = 138/244 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+EM+ELP + P +F ++ VL+YGPPG GKT + A A
Sbjct: 212 GYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANE 271
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 272 TGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVE 331
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P RL++L
Sbjct: 332 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVL 391
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVI 1081
++ ++ + LADDVDLEA+A T G+ G + E ++ ID +E +
Sbjct: 392 RIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEV 451
Query: 1082 TDAL 1085
D+L
Sbjct: 452 LDSL 455
Score = 52 (23.4 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 1074 EPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKK 1117
E +P IT A+ SVS+AE LR Y Y Q + + +
Sbjct: 746 EVDPVPYITKEHFAEAMKTAKRSVSDAE-LRRYEAYSQQMKASR 788
Score = 40 (19.1 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 386 AEDDIIAALSSEPSSKEDEE 405
A+D II EP ++EDEE
Sbjct: 187 AQDTIIH-WEGEPINREDEE 205
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 672 (241.6 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 165/469 (35%), Positives = 254/469 (54%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 240 PRGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 293
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +AP+I+ D L V L + +MD G K+++
Sbjct: 294 EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQRAH----- 342
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ + +L GRFD + + P ++ R IL+ I ++++ S+++ L+
Sbjct: 343 VVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEILQ--IHTKNMKLSEDVDLEQ 400
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
++++ G+ DL L A+ + + D S + + +L DDF A+ +
Sbjct: 401 ISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQ 460
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E W+D+GGL +++ ++E+++ P ++P+ F + + VL
Sbjct: 461 SNPSALRE---TVVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVL 517
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C F+S+KGPELL + G SE VRD+F KA AAPC+LF
Sbjct: 518 FYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILF 577
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 578 FDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILR 637
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P R IL+ RK P+A DVDL ++ +TEGFSG
Sbjct: 638 PGRLDQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSG 686
Score = 413 (150.4 bits), Expect = 8.9e-34, Sum P(2) = 8.9e-34
Identities = 94/249 (37%), Positives = 136/249 (54%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT + A A
Sbjct: 204 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANE 263
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 264 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 323
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +DAAL R GR DR + P RL+IL
Sbjct: 324 RRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEIL 383
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVI 1081
++ ++ + L++DVDLE I+ T G G + + + ID + I
Sbjct: 384 QIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDS----I 439
Query: 1082 TDALLKSIA 1090
LL S+A
Sbjct: 440 DADLLNSLA 448
Score = 38 (18.4 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 389 DIIAALSSEPSSKEDEE 405
D I EP +EDEE
Sbjct: 181 DTIIHCEGEPIKREDEE 197
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 586 (211.3 bits), Expect = 5.0e-66, Sum P(2) = 5.0e-66
Identities = 130/302 (43%), Positives = 179/302 (59%)
Query: 810 TLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
TL+ DF A+ P A R+ T + + WDD+G L I+ +K + P K+P +
Sbjct: 633 TLI--DFVDAIKVMQPSAKREGFITVPD---TTWDDIGALEKIREELKLAVLAPVKYPEM 687
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
+ L S VLL GPPGCGKT + A A + FISVKGPEL+N Y+G SE+AVR
Sbjct: 688 LERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRAC 747
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR--GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
F +A +APC++FFDEFDS+ PKR G D R+VNQ LTE+DGVE GV++ AAT
Sbjct: 748 FQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAAT 807
Query: 988 SRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR--KLP-LADDVDLEAIAHMTE 1044
+RPD++D A+LRPGRLD +L+ FP ER +ILK ++ K P LADDVDL+ IA TE
Sbjct: 808 NRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTE 867
Query: 1045 GFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLR 1104
G++G + + LNN D+N + + + RPSV+E ++ +
Sbjct: 868 GYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLC--VRSQHFQEALQQLRPSVNEQDR-K 924
Query: 1105 LY 1106
+Y
Sbjct: 925 IY 926
Score = 319 (117.4 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 70/207 (33%), Positives = 112/207 (54%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
D+GG+ + EM+ + K P + Q L +LL+GPPGCGKT + A + +
Sbjct: 252 DIGGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKM 310
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV 964
+ + EL+ G SE+ +R++F +A +PC+LF DE D+I R + + R+
Sbjct: 311 PLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKDMERRI 370
Query: 965 VNQFLTELDGV---EVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
V+Q ++ LD + E V V AAT+RPD+LD L R GR D + PS +ER +IL
Sbjct: 371 VSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREIL 430
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSG 1048
++ L + ++ + IA +T G+ G
Sbjct: 431 RIQCEGLSVDPKLNYDKIAELTPGYVG 457
Score = 163 (62.4 bits), Expect = 5.0e-66, Sum P(2) = 5.0e-66
Identities = 92/381 (24%), Positives = 151/381 (39%)
Query: 502 NNAYELTLEA--RGQQNNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLSWM 559
N A L+ +A R + + N + Q + S D + + K Q + + M
Sbjct: 199 NRAKNLSEDAVPRSKDHRNVPGLYQQLHQNQSRDRLRKF--KRDLEVQHPTESFRDIGGM 256
Query: 560 GTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKD 619
+T ++ + + SP+ +F LP G +L+HGPPG GKT LA+A++ L+
Sbjct: 257 DSTLKELCEMLIHIKSPE--FYFQLGLLPSRG-LLLHGPPGCGKTFLARAISGQLK--MP 311
Query: 620 LVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXX 679
L+ +S E IR+ +A+ ++P ++ D +
Sbjct: 312 LMEIPATELIGGISGESEERIREVFD----QAIGYSPCVLFIDEIDAIGGNRQWASKDME 367
Query: 680 XXXVIALTKFLVDIM-DEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQL 738
V L L ++ +E+G+ + +A+ + + L GRFD + +
Sbjct: 368 RRIVSQLISSLDNLKANEFGQS---------VVVIAATTRPDVLDPGLRRIGRFDHEIAI 418
Query: 739 PAPAASERKAILEHEIQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRY- 796
P+ ER+ IL IQ L ++ D +A GY DL LV R AV R
Sbjct: 419 HIPSRKERREILR--IQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRS 476
Query: 797 ------LHSDSSFEKHIKP-TLVRDDFSQAMHEF-LPVAMRDITKTSAEGGRS-GWDDVG 847
LH+ S EK++ TL D+ S+ E +P + + T AE + D
Sbjct: 477 MKKFRELHAAS--EKNMTTVTLDDDEPSEDAGETPVPDSKGEETAKDAEAEQKVDGDKET 534
Query: 848 GLTDIQNAIKEMIELPSKFPN 868
D IE P K N
Sbjct: 535 SAKDKSEGDSPNIETPKKATN 555
Score = 39 (18.8 bits), Expect = 5.7e-53, Sum P(2) = 5.7e-53
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 778 AYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL 811
A D++ + AV + + S SS +++ +PTL
Sbjct: 578 AMDVDNVAPEEPKKAVEQEVDSSSSNDEYYEPTL 611
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 664 (238.8 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 168/469 (35%), Positives = 249/469 (53%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 235 PRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 288
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA ++P+I+ D + V L + +MD G K+ S
Sbjct: 289 EAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQL----LTLMD--GMKKSSH----- 337
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD + + P A+ R +L I ++++ D++ L+
Sbjct: 338 LIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLR--IHTKNMKLHDDVDLEQ 395
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
+A++ G+ DL L + + D + + +L ++F AM +
Sbjct: 396 IAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTK 455
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W D+GGL ++ ++E+++ P + P+ F + ++ VL
Sbjct: 456 SSPSALRE---TVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVL 512
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FISVKGPELL + G SE VRDIF KA +AAPC+LF
Sbjct: 513 FYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLF 572
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 573 FDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILR 632
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P + R ILK RK PLA +VDL IA +T+GFSG
Sbjct: 633 PGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSG 681
Score = 411 (149.7 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 87/230 (37%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P++F ++ +L+YGPPG GKT I A A
Sbjct: 199 GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE 258
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE D+IAPKR + V
Sbjct: 259 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVE 318
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ + + V AAT+RP+ +D AL R GR DR + P RL++L
Sbjct: 319 RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVL 378
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + L DDVDLE IA + G G + E ++ ID
Sbjct: 379 RIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLID 428
Score = 266 (98.7 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 66/184 (35%), Positives = 95/184 (51%)
Query: 956 DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LRPGRLD+L++ P +
Sbjct: 589 DAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDK 648
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEIL-------- 1067
R ILK RK PLA +VDL IA +T+GFSG + + +
Sbjct: 649 SREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREK 708
Query: 1068 ------NN-IDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVA 1120
N+ +D +E +P IT A + AR SVS+ + +R Y ++ Q L +
Sbjct: 709 ERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSVSDND-IRKYEMFAQTLQQSRGFG 767
Query: 1121 AQSR 1124
R
Sbjct: 768 QNFR 771
Score = 37 (18.1 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 154 KKPVVQLVPGTEVAVAPKRRKNNV 177
K +QL G V + KRRK V
Sbjct: 42 KMDELQLFRGDTVILKGKRRKETV 65
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 600 (216.3 bits), Expect = 1.8e-65, Sum P(3) = 1.8e-65
Identities = 124/294 (42%), Positives = 179/294 (60%)
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF +A+ + +P A R+ T WDDVG L+ ++ + I P ++P +
Sbjct: 540 DFKKALKKVVPAAKREGFATIPN---VTWDDVGALSGVREELTNSILRPIRYPKKYKNMG 596
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ + VL+YGPPGCGKT + A A+ C FISVKGPELLNKY+G SE+AVR +F +A
Sbjct: 597 IDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAA 656
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
A++PC++FFDEFD++APKRG + G T+RVVNQ LTE+DG+E + VF+ AAT+RPD
Sbjct: 657 ASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPD 716
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH--MTEGFSGX 1049
++DAA+ RPGRLD++++ PSP ER +ILK ++ K+P+ DVDL + FSG
Sbjct: 717 IIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGA 776
Query: 1050 XXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKL 1103
H I D+N V + + ++ SK +PSVS ++L
Sbjct: 777 DLSLLVKEAAN---HAISRGFDNNSTEPDTVTMEDFIFAL-SKIKPSVSRKDEL 826
Score = 236 (88.1 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 49/137 (35%), Positives = 76/137 (55%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ ++GG+ I+E IE P P I++ + +LL+GP GCGKT + A A
Sbjct: 215 FSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGEL 274
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ ++ E+ + G SE VR +FS A A APC++F DE D+IAPKR + +
Sbjct: 275 KVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDMER 334
Query: 963 RVVNQFLTELDGVEVLT 979
R+V+Q LT +D + L+
Sbjct: 335 RIVSQLLTCMDSLNYLS 351
Score = 148 (57.2 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 43/143 (30%), Positives = 66/143 (46%)
Query: 981 VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 1040
V V AT+RP+ LD AL GR D+ + P R ILKVI+ K+ L ++ D E IA
Sbjct: 403 VIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYEEIA 462
Query: 1041 HMTEGFSGXXXXXXXXXXXXXXVHEI----LNNIDSNEPGKMPVITDALLKSIASKARPS 1096
+T G+ G V+ I LN S+ T+ ++++ S
Sbjct: 463 TLTPGYVGADINLLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTELLIS 522
Query: 1097 VSEAEKLRLYSIYGQFLDSKKSV 1119
E +L S+Y + +D KK++
Sbjct: 523 KEPLEPEKLNSLYIEMIDFKKAL 545
Score = 133 (51.9 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 51/215 (23%), Positives = 88/215 (40%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L++GPPG GKT LAKA+A + A+ + V L + +A+
Sbjct: 600 PAGVLMYGPPGCGKTLLAKAIASECQ------ANFISVKGPELLNKYVGESERAVRQVFQ 653
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A +P ++ FD + + L + MD EKR
Sbjct: 654 RAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTE-MDGL-EKRSE------ 705
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ +A+ + I ++ GR D V +P P+ ER IL+ + + D L+ V
Sbjct: 706 VFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIH-QDVDLIKV 764
Query: 770 AS--KCDGYDAYDLEILVDRTVHAAVGRYLHSDSS 802
+ +C + DL +LV + A+ R ++S+
Sbjct: 765 GTDLRCHSFSGADLSLLVKEAANHAISRGFDNNST 799
Score = 98 (39.6 bits), Expect = 1.8e-65, Sum P(3) = 1.8e-65
Identities = 47/178 (26%), Positives = 76/178 (42%)
Query: 498 HGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSS-- 555
+ NNA N++ ++L N G++V ++ + D+N+S+
Sbjct: 151 NNNNNNAINSNTTTNNVNTPNSKPKKKLKNSSN-GNNVFQFSNNNNNNGNNKDNNLSNGL 209
Query: 556 -----LSWMGTTAS---DVINRIKV-LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSL 606
S +G S D+ I+ + P+ +S + P IL+HGP G GKT L
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEI---YSHLGVEPPRGILLHGPSGCGKTLL 266
Query: 607 AKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNL 664
AKA+A L+ L A S +S E +R SN I++A P I+ D +
Sbjct: 267 AKAIAGELK--VPLFAISATEITSGVSGESEARVRTLFSNAIAQA----PCIIFIDEI 318
Score = 74 (31.1 bits), Expect = 1.8e-65, Sum P(3) = 1.8e-65
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 699 EKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRS 758
+++K+ G + + + E + +L GRFD + L P + R IL+ +
Sbjct: 392 KQQKNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMR 451
Query: 759 LECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSD 800
LE + + ++A+ GY D+ +LV +V R S+
Sbjct: 452 LENNFDYE-EIATLTPGYVGADINLLVKEAATNSVNRIFTSN 492
Score = 53 (23.7 bits), Expect = 8.8e-62, Sum P(4) = 8.8e-62
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 248 LPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQA 288
+P + NN NN I SN T+ ++ S KK+ + +
Sbjct: 141 IPSNVNSNNNNNNNNNAINSNTTTNNVNTPNSKPKKKLKNS 181
Score = 43 (20.2 bits), Expect = 8.8e-62, Sum P(4) = 8.8e-62
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 466 PASCNGALENKTKARELRTEIFCVLTFSEESLHGGKNNAYELTL 509
P+ C L K A EL+ +F + S G++ A TL
Sbjct: 258 PSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTL 301
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 655 (235.6 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 183/566 (32%), Positives = 273/566 (48%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPGSGKT +A+AVA + + S+L+ E +R
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM--SKLAGESESNLR 291
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A EA +APSI+ D + V L + +MD G K
Sbjct: 292 KAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD--GLKS 341
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + + + I +L GRFD + + P R +L I ++++
Sbjct: 342 RAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IHTKNMKL 394
Query: 762 SDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RD 814
++++ L+ SK GY DL L + + D + I ++ D
Sbjct: 395 AEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSND 454
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P F +
Sbjct: 455 HFQTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 511
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 512 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 571
Query: 935 AAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
+APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 572 QSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPD 631
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXX 1051
++D ALLRPGRLD+L++ P R I K RK P+A DVDL A+A T+GFSG
Sbjct: 632 IIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADI 691
Query: 1052 XXXXXXXXXXXVHE-ILNNID-----SNEPGKMPVITDALLKSIASK-------ARPSVS 1098
+ E I +I+ + P M + + + A AR SVS
Sbjct: 692 TEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESMKYARRSVS 751
Query: 1099 EAEKLRLYSIYGQFLDSKKSVAAQSR 1124
+A+ +R Y + Q L + ++ R
Sbjct: 752 DAD-IRKYQAFAQTLQQSRGFGSEFR 776
Score = 419 (152.6 bits), Expect = 4.8e-35, Sum P(2) = 4.8e-35
Identities = 88/233 (37%), Positives = 132/233 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 385
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNE 1074
++ ++ + LA+DVDLE ++ T G+ G + E ++ ID ++
Sbjct: 386 RIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438
Score = 44 (20.5 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 148 VVSTFPKK-PVVQLVPGTEVAVAPKRRKNNV--KKHEDSYMQAFNESTSIAKALLRVQDS 204
VVS P +QL G + + K+RK+ V +++ + + ++ LRV+
Sbjct: 43 VVSLHPDTMEKLQLFRGDTILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLG 102
Query: 205 DEGLSHKC-NVK 215
D H+C +VK
Sbjct: 103 DVISVHQCPDVK 114
Score = 40 (19.1 bits), Expect = 5.7e-65, Sum P(2) = 5.7e-65
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 69 RQFAECISLADHTIVQVRVVSN-VLKATL 96
R+ CI+LAD T + ++ N V+++ L
Sbjct: 69 RKDTVCIALADETCDEPKIRMNKVVRSNL 97
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 651 (234.2 bits), Expect = 4.7e-65, Sum P(2) = 4.7e-65
Identities = 167/477 (35%), Positives = 246/477 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPGSGKT +A+AVA + + S+L+ E +R
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM--SKLAGESESNLR 290
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A EA +APSI+ D + V L + +MD G K
Sbjct: 291 KAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQL----LTLMD--GLKS 340
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + + + I +L GRFD + + P R +L I ++++
Sbjct: 341 RAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IHTKNMKL 393
Query: 762 SDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RD 814
++++ L+ SK GY DL L + + D S + I ++ +
Sbjct: 394 AEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNE 453
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P F +
Sbjct: 454 HFHTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 510
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+IF KA
Sbjct: 511 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 570
Query: 935 AAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
+APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 571 QSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPD 630
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
++D+ALLRPGRLD+L++ P RL+I K RK P+A DVD+ A+A T+GFSG
Sbjct: 631 IIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSG 687
Score = 424 (154.3 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 90/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LA+DVDLE I+ T G+ G + E ++ ID
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
Score = 45 (20.9 bits), Expect = 4.7e-65, Sum P(2) = 4.7e-65
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 148 VVSTFPKK-PVVQLVPGTEVAVAPKRRKNNV--KKHEDSYMQAFNESTSIAKALLRVQDS 204
VVS P +QL G + + K+RK+ V +++ + + ++ LRV+
Sbjct: 42 VVSLHPTTMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLG 101
Query: 205 DEGLSHKC-NVK 215
D H+C +VK
Sbjct: 102 DVISVHQCPDVK 113
Score = 42 (19.8 bits), Expect = 9.7e-65, Sum P(2) = 9.7e-65
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 260 NNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSD--SVAKGHVKIARALRLY 312
+N P + T K+ S KK + VV +D SV H L+L+
Sbjct: 2 SNEPESSDSKTKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLF 56
Score = 41 (19.5 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 69 RQFAECISLADHTIVQVRVVSN-VLKATL 96
R+ CI+LAD T + ++ N V+++ L
Sbjct: 68 RKDTVCIALADETCEEPKIRMNKVVRSNL 96
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 651 (234.2 bits), Expect = 6.0e-65, Sum P(2) = 6.0e-65
Identities = 166/477 (34%), Positives = 249/477 (52%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P +L++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 248 FKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 305
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D + V L + +MD G K
Sbjct: 306 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 355
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL+ I ++++
Sbjct: 356 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQ--IHTKNMKL 408
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
D++ L+ +A++ GY D+ L + + + + + + +L +
Sbjct: 409 GDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTME 468
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R++ R W+D+GGL +++ ++E ++ P P F +
Sbjct: 469 NFRFALGVSNPSALREVAVVEVPNVR--WEDIGGLDEVKQDLREQVQYPVDHPEKFLKFG 526
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
L VL YGPPG GKT + A A C+ FISVKGPELL+ + G SE +RDIF KA
Sbjct: 527 LSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKAR 586
Query: 935 AAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAAPC++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV AT+RP+
Sbjct: 587 AAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPE 646
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL RPGRLD L++ P RL ILK RK P++DDVDL+ IA+ T GFSG
Sbjct: 647 QLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSG 703
Score = 447 (162.4 bits), Expect = 3.6e-38, Sum P(2) = 3.6e-38
Identities = 97/244 (39%), Positives = 137/244 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+EM+ELP + P +F ++ VLLYGPPG GKT + A A
Sbjct: 220 GYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANE 279
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 280 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 339
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P P RL+IL
Sbjct: 340 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 399
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVI 1081
++ ++ + L DDVDLE IA T G+ G + E ++ ID +E +
Sbjct: 400 QIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDAEV 459
Query: 1082 TDAL 1085
D+L
Sbjct: 460 LDSL 463
Score = 257 (95.5 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 66/172 (38%), Positives = 88/172 (51%)
Query: 956 DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
D G +DRVVNQ LTE+DG+ VFV AT+RP+ LD AL RPGRLD L++ P
Sbjct: 611 DAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDEL 670
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILN---N--- 1069
RL ILK RK P++DDVDL+ IA+ T GFSG + E + N
Sbjct: 671 GRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESITADINRTK 730
Query: 1070 ----------IDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQ 1111
+D + +P +T + +AR SVS+ E +R Y + Q
Sbjct: 731 ALEAAGEDVPMDEDAEDPVPELTKRHFEEAMQQARKSVSDVE-IRRYEAFAQ 781
Score = 44 (20.5 bits), Expect = 6.0e-65, Sum P(2) = 6.0e-65
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 158 VQLVPGTEVAVAPKRRKNNVK--KHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKC 212
+QL G V V K+RK+ V +D + + LRV+ D H C
Sbjct: 67 LQLFRGDTVLVRGKKRKDTVLIVLADDELDDGSARLNRVVRHNLRVKHGDVVTIHPC 123
Score = 41 (19.5 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 7/29 (24%), Positives = 18/29 (62%)
Query: 108 EVLELNSEHAEAAILNQVRIVHEAMRFPL 136
++++L+ + +A +L+ + + E RF L
Sbjct: 446 DLIDLDEDTIDAEVLDSLGVTMENFRFAL 474
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 648 (233.2 bits), Expect = 1.0e-64, Sum P(2) = 1.0e-64
Identities = 167/478 (34%), Positives = 245/478 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPGSGKT +A+AVA + + S+L+ E +R
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIM--SKLAGESESNLR 290
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A EA +APSI+ D + V L + +MD G K
Sbjct: 291 KAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQL----LTLMD--GLKS 340
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + + + I +L GRFD + + P R +L I ++++
Sbjct: 341 RAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IHTKNMKL 393
Query: 762 SDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RD 814
++++ L+ SK GY DL L + + D S + I ++ +
Sbjct: 394 AEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNE 453
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P F +
Sbjct: 454 HFHTALGNSNPSALRE---TVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFG 510
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+IF KA
Sbjct: 511 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 570
Query: 935 AAAPCLLFFDEFDSIAPKRGH----DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRP 990
+APC+LFFDE DSIA +RG D G DRV+NQ LTE+DG+ VF+ AT+RP
Sbjct: 571 QSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRP 630
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
D++D+ALLRPGRLD+L++ P RL+I K RK P+A DVD+ A+A T+GFSG
Sbjct: 631 DIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSG 688
Score = 424 (154.3 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 90/230 (39%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LA+DVDLE I+ T G+ G + E ++ ID
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
Score = 45 (20.9 bits), Expect = 1.0e-64, Sum P(2) = 1.0e-64
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 148 VVSTFPKK-PVVQLVPGTEVAVAPKRRKNNV--KKHEDSYMQAFNESTSIAKALLRVQDS 204
VVS P +QL G + + K+RK+ V +++ + + ++ LRV+
Sbjct: 42 VVSLHPATMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLG 101
Query: 205 DEGLSHKC-NVK 215
D H+C +VK
Sbjct: 102 DVISVHQCPDVK 113
Score = 41 (19.5 bits), Expect = 2.6e-64, Sum P(2) = 2.6e-64
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 69 RQFAECISLADHTIVQVRVVSN-VLKATL 96
R+ CI+LAD T + ++ N V+++ L
Sbjct: 68 RKDTVCIALADETCEEPKIRMNKVVRSNL 96
>WB|WBGene00004191 [details] [associations]
symbol:prx-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0006625 "protein targeting
to peroxisome" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0005778 HSSP:Q01853 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 GeneTree:ENSGT00550000075032
EMBL:Z70205 UniGene:Cel.18145 GeneID:181538 KEGG:cel:CELE_C11H1.4
CTD:181538 NextBio:914356 EMBL:AB054992 PIR:T19207 PIR:T19208
RefSeq:NP_510386.2 ProteinModelPortal:G5ED99 SMR:G5ED99
EnsemblMetazoa:C11H1.4a WormBase:C11H1.4a OMA:PYPEHGI
Uniprot:G5ED99
Length = 996
Score = 579 (208.9 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 134/344 (38%), Positives = 194/344 (56%)
Query: 762 SDEILLDVASKCDGYDAYDLEIL-VDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAM 820
+ +I+ ++ K DGY ++E L V V A+ K +K + + +A
Sbjct: 660 NSDIISEIVKKSDGYTFSEIEKLAVSINVECAI-----------KGVK-YITEIEVEKAF 707
Query: 821 HEFLPVAMRDITKTSAEGGR--SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
F+ M I E G+ +DVGG+ + + ++++I P K+P +F + +
Sbjct: 708 ECFVAGKMGKI-----EDGQVLPTMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVS 762
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
+LL+GP GCGKT + A + + ++VKGPELL+KYIGASE+ VR +F KA + AP
Sbjct: 763 KGILLHGPSGCGKTLLANATISNSNFSVVNVKGPELLSKYIGASEENVRLVFEKARSCAP 822
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEV-LTGVFVFAATSRPDLLDAAL 997
C+LFFDE DS+APKRGHD+TGVTDRVVNQ LTELDG E + GV + TSR DL+D AL
Sbjct: 823 CILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRIDLIDDAL 882
Query: 998 LRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXX 1057
LRPGR D ++C P ERLDI+KV++ KL DVD E +A T+G+SG
Sbjct: 883 LRPGRFDHHVYCGHPEKTERLDIMKVLTNKLK-PTDVDFECLAQKTDGWSGADLQLLFTN 941
Query: 1058 XXXXXVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAE 1101
+I D E +P I A ++S+ + + P ++
Sbjct: 942 AQFYNARQIAKEEDGLEEDNVP-IDQASIESVFNDSIPKPKRSQ 984
Score = 98 (39.6 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 71 FAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVHE 130
FAE + V + + + + + + P TEDD+ V+ + E LNQ+R+V +
Sbjct: 79 FAEVSGFHEKQEVILEKMESKTYCSHIEVAPRTEDDYSVIAQSQSSIENEFLNQIRLVSQ 138
Query: 131 AMRFPLWLHGRTIITFHVVSTFP--KKPVVQLVPGTEVAV 168
M P +L + F +++ P KPV+ L TE+ V
Sbjct: 139 NMIIPHFLSPGVYVQFRILNIVPASNKPVM-LNNDTELHV 177
Score = 93 (37.8 bits), Expect = 2.3e-63, Sum P(3) = 2.3e-63
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEA 651
H+++ G GSGKT+ K +A+ L H+ V V C+ L II + LS+ + E
Sbjct: 503 HVMVLGGNGSGKTTFIKKLARRLSHNSS-VTFCKMVPCALLKGRSADIIEKLLSDTLHEM 561
Query: 652 LDHAPSIVIFDN 663
PS + D+
Sbjct: 562 EVKKPSCLFLDD 573
Score = 86 (35.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 40/170 (23%), Positives = 63/170 (37%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + +P+ IL+HGP G GKT LA A + +V V L +
Sbjct: 754 FESVGVPVSKGILLHGPSGCGKTLLANATISNSNFS------VVNVKGPELLSKYIGASE 807
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+ + +A AP I+ FD L V + L ++ G
Sbjct: 808 ENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVV---NQLLTELDGAEG--- 861
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILE 751
G+ + + ++ I +L GRFD HV P +ER I++
Sbjct: 862 ----GMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIMK 907
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 651 (234.2 bits), Expect = 5.0e-63, P = 5.0e-63
Identities = 163/469 (34%), Positives = 245/469 (52%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL+ GPPG+GKT +A+AVA L+ + S++S E +R+A +
Sbjct: 243 PRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKMSGESESNLRKAFA---- 296
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
E ++P+I+ D + V L + +MD G K ++
Sbjct: 297 ECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQL----LTLMD--GLKTRAH----- 345
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD + + P A R IL I ++++ +++ L+
Sbjct: 346 VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKLGEDVDLEQ 403
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++C G+ DL L + + D + + + +L ++F AM +
Sbjct: 404 VANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGK 463
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ E + W D+GGL +++ ++E+++ P + P + + ++ VL
Sbjct: 464 SSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVL 520
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA AAAPC+LF
Sbjct: 521 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLF 580
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 581 FDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLR 640
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P RL I K RK PL+ D+DL +A T GFSG
Sbjct: 641 PGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSG 689
Score = 412 (150.1 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 88/230 (38%), Positives = 129/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 207 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE 266
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F++ +P +LF DE D+IAPKR + V
Sbjct: 267 TGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVE 326
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 327 KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 386
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + L +DVDLE +A+ GF G + E + ID
Sbjct: 387 RIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELID 436
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 651 (234.2 bits), Expect = 5.0e-63, P = 5.0e-63
Identities = 163/469 (34%), Positives = 245/469 (52%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL+ GPPG+GKT +A+AVA L+ + S++S E +R+A +
Sbjct: 243 PRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKMSGESESNLRKAFA---- 296
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
E ++P+I+ D + V L + +MD G K ++
Sbjct: 297 ECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQL----LTLMD--GLKTRAH----- 345
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ +A+ I +L GRFD + + P A R IL I ++++ +++ L+
Sbjct: 346 VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKLGEDVDLEQ 403
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RDDFSQAMHE 822
VA++C G+ DL L + + D + + + +L ++F AM +
Sbjct: 404 VANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGK 463
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ E + W D+GGL +++ ++E+++ P + P + + ++ VL
Sbjct: 464 SSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVL 520
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA AAAPC+LF
Sbjct: 521 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLF 580
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 581 FDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLR 640
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P RL I K RK PL+ D+DL +A T GFSG
Sbjct: 641 PGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSG 689
Score = 412 (150.1 bits), Expect = 6.6e-35, P = 6.6e-35
Identities = 88/230 (38%), Positives = 129/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 207 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE 266
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F++ +P +LF DE D+IAPKR + V
Sbjct: 267 TGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVE 326
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 327 KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 386
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + L +DVDLE +A+ GF G + E + ID
Sbjct: 387 RIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELID 436
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 649 (233.5 bits), Expect = 8.3e-63, P = 8.3e-63
Identities = 164/478 (34%), Positives = 246/478 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 236 FKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVM--SKMSGESESNLR 293
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A E + P+I+ D + V L + +MD G K
Sbjct: 294 KAFE----ECEKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQL----LTLMD--GVKG 343
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 344 RSN-----LVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 396
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RD 814
+D++ L+ +A++C G+ DL L + + D + + +L +
Sbjct: 397 ADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTME 456
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 457 NFRFAQGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 573
Query: 935 AAAPCLLFFDEFDSIAPKRGH----DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRP 990
AAAPC+LFFDE DSIA RG D G +DRV+NQ LTE+DG+ VF+ AT+RP
Sbjct: 574 AAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRP 633
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
D++D A+LRPGRLD+L++ P R ILK RK PL+ D+DL +A T GFSG
Sbjct: 634 DIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSG 691
Score = 422 (153.6 bits), Expect = 5.3e-36, P = 5.3e-36
Identities = 92/230 (40%), Positives = 129/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 208 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANE 267
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F + P +LF DE D+IAPKR N V
Sbjct: 268 TGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVE 327
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DGV+ + + V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 328 RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 387
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE IA+ GF G + E + ID
Sbjct: 388 RIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELID 437
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 649 (233.5 bits), Expect = 8.3e-63, P = 8.3e-63
Identities = 164/478 (34%), Positives = 246/478 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 236 FKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVM--SKMSGESESNLR 293
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+A E + P+I+ D + V L + +MD G K
Sbjct: 294 KAFE----ECEKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQL----LTLMD--GVKG 343
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 344 RSN-----LVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 396
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTLV--RD 814
+D++ L+ +A++C G+ DL L + + D + + +L +
Sbjct: 397 ADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTME 456
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 457 NFRFAQGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 573
Query: 935 AAAPCLLFFDEFDSIAPKRGH----DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRP 990
AAAPC+LFFDE DSIA RG D G +DRV+NQ LTE+DG+ VF+ AT+RP
Sbjct: 574 AAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRP 633
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
D++D A+LRPGRLD+L++ P R ILK RK PL+ D+DL +A T GFSG
Sbjct: 634 DIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSG 691
Score = 422 (153.6 bits), Expect = 5.3e-36, P = 5.3e-36
Identities = 92/230 (40%), Positives = 129/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 208 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANE 267
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F + P +LF DE D+IAPKR N V
Sbjct: 268 TGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVE 327
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DGV+ + + V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 328 RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 387
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + LADDVDLE IA+ GF G + E + ID
Sbjct: 388 RIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELID 437
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 645 (232.1 bits), Expect = 2.2e-62, P = 2.2e-62
Identities = 157/429 (36%), Positives = 233/429 (54%)
Query: 630 SRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKF 689
S+L+ E +R+A EA +AP+I+ D L V L
Sbjct: 8 SKLAGESESNLRKAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL--- 60
Query: 690 LVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAI 749
+ +MD G K+++ + +A+ I +L GRFD V + P A+ R I
Sbjct: 61 -LTLMD--GLKQRAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 112
Query: 750 LEHEIQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFE 804
L+ I ++++ +D++ L+ V ++ G+ DL L A+ + + D + +
Sbjct: 113 LQ--IHTKNMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETID 170
Query: 805 KHIKPTLV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIEL 862
+ +L DDF A+ + P A+R+ T E + W+D+GGL D++ ++E+++
Sbjct: 171 AEVMNSLAVTMDDFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQY 227
Query: 863 PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGAS 922
P + P+ F + + VL YGPPGCGKT + A A C FIS+KGPELL + G S
Sbjct: 228 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 287
Query: 923 EQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLT 979
E VR+IF KA AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+
Sbjct: 288 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 347
Query: 980 GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAI 1039
VF+ AT+RPD++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDL+ +
Sbjct: 348 NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFL 407
Query: 1040 AHMTEGFSG 1048
A MT GFSG
Sbjct: 408 AKMTNGFSG 416
Score = 287 (106.1 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 62/161 (38%), Positives = 92/161 (57%)
Query: 911 GPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLT 970
GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V R+V+Q LT
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLT 62
Query: 971 ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPL 1030
+DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL++ ++ + L
Sbjct: 63 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKL 122
Query: 1031 ADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
ADDVDLE + + T G G + + ++ ID
Sbjct: 123 ADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLID 163
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 644 (231.8 bits), Expect = 2.9e-62, P = 2.9e-62
Identities = 164/469 (34%), Positives = 242/469 (51%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG GKT +A+AVA L+ + S+L+ E +R+A
Sbjct: 236 PKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIM--SKLAGESESNLRKAFE---- 289
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
EA +APSI+ D + V L + +MD G K ++
Sbjct: 290 EAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIVSQL----LTLMD--GLKSRAH----- 338
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ + + I +L GRFD + + P A+ R I+ I ++++ + + L+
Sbjct: 339 VIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEIMR--IHTKNMKLDETVDLEA 396
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRDDFSQAMHE 822
VA++ GY DL L + + + D + I ++ +D F A+
Sbjct: 397 VANETHGYVGADLAALCTESALQCIREKMDVIDLEDETISAEILESMSVTQDHFRTALTL 456
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
P A+R+ T E + W+D+GGL ++ ++E ++ P + P F + ++ VL
Sbjct: 457 SNPSALRE---TVVEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVL 513
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
YGPPGCGKT + A A C FIS+KGPELL + G SE VR++F KA AAPC+LF
Sbjct: 514 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLF 573
Query: 943 FDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
FDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD++D A+LR
Sbjct: 574 FDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILR 633
Query: 1000 PGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
PGRLD+L++ P R+ ILK K P+A DVDLE + T+GFSG
Sbjct: 634 PGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSG 682
Score = 426 (155.0 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 88/230 (38%), Positives = 130/230 (56%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ I+E++ELP + P +F ++ +LLYGPPGCGKT I A A
Sbjct: 200 GYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANE 259
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR V
Sbjct: 260 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVE 319
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL+I+
Sbjct: 320 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEIM 379
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
++ ++ + L + VDLEA+A+ T G+ G + E ++ ID
Sbjct: 380 RIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVID 429
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 595 (214.5 bits), Expect = 5.5e-62, Sum P(2) = 5.5e-62
Identities = 149/426 (34%), Positives = 210/426 (49%)
Query: 644 LSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKS 703
L +A H PSI+ D + V L L+D M
Sbjct: 361 LRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLT-LLDGM--------- 410
Query: 704 SCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSD 763
G + +A+ I ++L GR + +++ P S R I++ + E +D
Sbjct: 411 -ANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEIND 469
Query: 764 EILLDVASKCDGYDAYDLEILVDRTVHAAVGRY--LHSDSSFEKHIKPTLVRDDFSQAMH 821
L D+AS+ Y DL +V A+ R L D+S I + DD A+
Sbjct: 470 AQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTS-GLDIFGAVQMDDLEFALS 528
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
AMR+ E W D+GG +++ +KE +E P F++ +R V
Sbjct: 529 SVRQSAMREFMM---ESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGV 585
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPGC KT A A L FI+VKGPEL +K++G SE+AVR +F KA A+P ++
Sbjct: 586 LLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVI 645
Query: 942 FFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPG 1001
FFDE D++ RG DN+ +DRVV L ELDG+E L V V AAT+RPD++D AL+RPG
Sbjct: 646 FFDEIDALTANRGEDNS--SDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPG 703
Query: 1002 RLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXX 1061
RLDRLL+ P+ R I+K+ + K+ A+DVDL+ IA TEG SG
Sbjct: 704 RLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLI 763
Query: 1062 XVHEIL 1067
+HE L
Sbjct: 764 AMHEDL 769
Score = 364 (133.2 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 79/207 (38%), Positives = 118/207 (57%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ +GGL I++++ELP + P +F + VLLYGPPG GKT ++ A AA
Sbjct: 278 FSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEA 337
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ + ++ GP ++ KY+G +E +R IF A A P ++F DE D++APKR D +
Sbjct: 338 NAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAES 397
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R V LT LDG+ V V AAT+RP+ +D AL RPGRL++ + P RLDI+K
Sbjct: 398 RAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIK 457
Query: 1023 VISRKLPLA-DDVDLEAIAHMTEGFSG 1048
++ +P +D LE +A T + G
Sbjct: 458 LLLSGVPNEINDAQLEDLASRTHAYVG 484
Score = 80 (33.2 bits), Expect = 5.5e-62, Sum P(2) = 5.5e-62
Identities = 20/69 (28%), Positives = 39/69 (56%)
Query: 546 TQGFDSNVSSLSW--MGTTASDVINRIKVLLSP-DSGLWFSTYHLPLPGHILIHGPPGSG 602
TQ FD S++++ +G + + ++ P + F +++ P +L++GPPG+G
Sbjct: 266 TQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTG 325
Query: 603 KTSLAKAVA 611
KT + +AVA
Sbjct: 326 KTMVMRAVA 334
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 627 (225.8 bits), Expect = 7.0e-62, Sum P(2) = 7.0e-62
Identities = 183/559 (32%), Positives = 263/559 (47%)
Query: 567 INRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKS--LEHHKDLVAHI 624
+N + +L+P+ F + P IL HGPPG GKT LA A+A + +K +
Sbjct: 247 MNVLFPILNPEP---FKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEV 303
Query: 625 VFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVI 684
+ S +S IR+ S+A APSIV D + V
Sbjct: 304 I----SGVSGASEENIRE----LFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRIVT 355
Query: 685 ALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAAS 744
L + D G+K G + + + + + +L SGRF+ + L AP
Sbjct: 356 QLLTCM-DGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDED 414
Query: 745 ERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS---DS 801
R IL Q+ LE + +A G+ DLE + A+ R L S +
Sbjct: 415 ARAEILSVVAQKLRLEGPFD-KKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQ 473
Query: 802 SFEKHIKPTLVRDDFSQAMHEFLPVAMRD----ITKTSAEGGRSG--------WDDVGGL 849
S + + +R + + E L V M D + A R G WDDVGGL
Sbjct: 474 SGDGEDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGL 533
Query: 850 TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
++ I P K P+I+ + L + LLYGPPGCGKT I AAA F+ +
Sbjct: 534 DHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHI 593
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFL 969
KG ELLNKY+G SE A+R +F +A APC++FFDE D++ RG + V +R++NQFL
Sbjct: 594 KGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQFL 653
Query: 970 TELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLP 1029
ELDG E V+V AT+RPD++D A LRPGR LL+ P+ ER ILK I+RK P
Sbjct: 654 VELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKP 712
Query: 1030 LADDVDLEAIA-HMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITDALLKS 1088
+ VDL+ IA + EGFSG V E++ + +S+E + IT +K+
Sbjct: 713 IDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDD-VTDITQCTIKT 771
Query: 1089 -----IASKARPSVSEAEK 1102
S PSV++ ++
Sbjct: 772 RHFEQALSLVSPSVNKQQR 790
Score = 334 (122.6 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 80/242 (33%), Positives = 121/242 (50%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
D GG+ I + ++ + P P F + ++ S +L +GPPGCGKT + A A +
Sbjct: 234 DFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGV 293
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV 964
F + E+++ GASE+ +R++FSKA AP ++F DE D+I KR + + R+
Sbjct: 294 PFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRI 353
Query: 965 VNQFLTELDGV---------EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSP 1014
V Q LT +DG + G V V AT+RPD LD AL R GR + + P
Sbjct: 354 VTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDE 413
Query: 1015 RERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNE 1074
R +IL V+++KL L D + IA +T GF G + IL++ S +
Sbjct: 414 DARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQ 473
Query: 1075 PG 1076
G
Sbjct: 474 SG 475
Score = 40 (19.1 bits), Expect = 7.0e-62, Sum P(2) = 7.0e-62
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 357 LELDNKNHKTKKMLEKT------SSGIYMDDGDLSAEDDII 391
L+ ++H K+ +E++ SS D GD+S +D +
Sbjct: 105 LQRAEQSHLRKRNMERSVSSSPSSSSSSEDSGDVSTSEDAV 145
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 640 (230.4 bits), Expect = 7.8e-62, P = 7.8e-62
Identities = 152/411 (36%), Positives = 219/411 (53%)
Query: 643 ALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRK 702
AL + +EA + PSI+ D + V+A L+ +MD G
Sbjct: 326 ALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVAT---LLTLMDGMG---- 378
Query: 703 SSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE-- 760
G + +A+ + +L GRFD V++ P R IL + R S +
Sbjct: 379 ---AAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRH 435
Query: 761 -CSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH-IKPTLVRDDFSQ 818
E + +ASK GY DL L +V + R L +D++ +K +K TL D
Sbjct: 436 VLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTL--KDVES 493
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
AM + P AMR+I E + W D+GG +++ +KEMI+LP + FA+ +
Sbjct: 494 AMVDIRPSAMREIF---LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAP 550
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
VLLYGPPGC KT A A + F++VKGPE+ NKY+G SE+A+R+IF KA +AAP
Sbjct: 551 KGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAP 610
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALL 998
++FFDE D+++P R +T + V+ L E+DGVE L GV + AAT+RPD +DAALL
Sbjct: 611 SIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALL 670
Query: 999 RPGRLDRLLFCDFPSPRERLDILKVISRKLPLADD-VDLEAIAHMTEGFSG 1048
RPGRLDR ++ P RL+ILK ++K + VDL +A TEG+SG
Sbjct: 671 RPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSG 721
Score = 361 (132.1 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 92/285 (32%), Positives = 144/285 (50%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
VGGL ++K IE+P P +F+ + +LL+GPPG GKT ++ A +
Sbjct: 247 VGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAH 306
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG-VTDRV 964
+++ GP +++KY+G +E A+RDIF++A P ++F DE DSIAP R +D++G V RV
Sbjct: 307 VLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRV 366
Query: 965 VNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL-KV 1023
V LT +DG+ V V AAT+RP+ +D AL RPGR D+ + P R DIL K
Sbjct: 367 VATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQ 426
Query: 1024 ISRKLPLADDVDLEAIAHM---TEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPV 1080
SR +D EAI ++ T G+ G + L D+N
Sbjct: 427 FSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGT-DANIDKFSLK 485
Query: 1081 ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRD 1125
+T ++S RPS L + +Y + ++ + + ++
Sbjct: 486 VTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKE 530
Score = 212 (79.7 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 74/255 (29%), Positives = 113/255 (44%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC-SRLSLEKGPII 640
FS++ + P IL+HGPPG+GKT L + VA + AH++ + S +S G
Sbjct: 271 FSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSN------AHVLTINGPSIVSKYLGET- 323
Query: 641 RQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEK 700
AL + +EA + PSI+ D + V+A L+ +MD G
Sbjct: 324 EAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVAT---LLTLMDGMG-- 378
Query: 701 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE 760
G + +A+ + +L GRFD V++ P R IL + R S +
Sbjct: 379 -----AAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSD 433
Query: 761 ---CSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH-IKPTLVRDDF 816
E + +ASK GY DL L +V + R L +D++ +K +K TL D
Sbjct: 434 RHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTL--KDV 491
Query: 817 SQAMHEFLPVAMRDI 831
AM + P AMR+I
Sbjct: 492 ESAMVDIRPSAMREI 506
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 632 (227.5 bits), Expect = 5.8e-61, P = 5.8e-61
Identities = 177/534 (33%), Positives = 264/534 (49%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPG GKT++ A L H++ V CS L + + L S A
Sbjct: 56 VLLRGPPGCGKTTVVAAACSQLG------LHLLKVPCSSLCADSSGAVETKLQAIFSRAR 109
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P++++ L V+A + L ++DE +SC P+
Sbjct: 110 RCRPAVLL---LTAVDLLGRDRDGLGEDARVVAALRHL--LLDE---DPLNSCP--PLMV 159
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ + +P + ++ F +++PA + +R +IL L E+ L +A
Sbjct: 160 VATTSRAQDLPADVQTA--FPHELEVPALSEGQRLSILR--ALTAHLPLGQEVNLAQLAR 215
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRY--LHSDSSFEKHIKPTLVRDDFSQAMHEF-LPVAM 828
+C G+ DL L+ + AA R L + + L F +F + +
Sbjct: 216 RCAGFVVGDLYALLTHSSRAACTRIKNLGLAGGLTEEDEGELCAAGFPLLAEDFGQALEL 275
Query: 829 RDITKTSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLY 884
+ + A G W DVGGL +++ I E I+LP + P + + LR RS +LL+
Sbjct: 276 QQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLG-LR-RSGLLLH 333
Query: 885 GPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFD 944
GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++FFD
Sbjct: 334 GPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFD 393
Query: 945 EFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGR 1002
E DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALLRPGR
Sbjct: 394 ELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGR 453
Query: 1003 LDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDLEAIAHMTEG-FSGXXXXXXXXXXXX 1060
D+L+F R +L +L I+RK L V L + +G
Sbjct: 454 FDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMT 513
Query: 1061 XXVHEILNNIDSN-EPGKMPV-ITDALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
+ +++++ EPG + +T L A++ +PSVSE E LR I +F
Sbjct: 514 AALKRRVHDLEEGLEPGSSALMLTMEDLLQAAARLQPSVSEQELLRYKRIQHKF 567
Score = 185 (70.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 59/173 (34%), Positives = 79/173 (45%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S+VLL GPPGCGKT +V AA + L + V L GA E ++ IFS+A P
Sbjct: 54 SSVLLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRCRP 113
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVV---NQFLTELDGVEVLTGVFVFAATSRP-DL-L 993
+L D + R D G RVV L + D + + V A TSR DL
Sbjct: 114 AVLLLTAVDLLG--RDRDGLGEDARVVAALRHLLLDEDPLNSCPPLMVVATTSRAQDLPA 171
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
D P L+ S +RL IL+ ++ LPL +V+L +A GF
Sbjct: 172 DVQTAFPHELEVPAL----SEGQRLSILRALTAHLPLGQEVNLAQLARRCAGF 220
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 652 (234.6 bits), Expect = 6.6e-61, Sum P(2) = 6.6e-61
Identities = 183/539 (33%), Positives = 273/539 (50%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ GPPGSGKT+ AVA + L H++ V CS L + + L S
Sbjct: 464 GSVLLRGPPGSGKTT---AVAAACSR---LGLHLLKVPCSSLCADSSGAVETKLQAAFSR 517
Query: 651 ALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPI 710
A P +++ L V+A + L ++DE +SC P+
Sbjct: 518 ARRCRPVVLL---LTAVDLLGRDRDGLGEDARVVATLRHL--LLDE---DPLASCP--PL 567
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDV 769
VA+ + +P + ++ F +++P A ++R ++L L E+ L +
Sbjct: 568 MVVATTSRAQDLPADVQTA--FPHELEVPVLAEAQRLSVLR--ALTAHLPLGQEVNLAQL 623
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHS------DSSFEKHIKPT---LVRDDFSQAM 820
A +C G+ DL L+ + AA R +S E + L+ +DF QA+
Sbjct: 624 ARRCAGFVVGDLFALLTHSSRAACTRIKNSGWAGGLSEEDEGELCAAGFPLLAEDFGQAL 683
Query: 821 HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 880
+ + I W DVGGL +++ I E I+LP + P + + LR RS
Sbjct: 684 EQLQAAHSQAIGAPRIPS--VSWHDVGGLQEVKKEILETIQLPLEHPELLSLG-LR-RSG 739
Query: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 940
+LL+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC+
Sbjct: 740 LLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCI 799
Query: 941 LFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALL 998
+FFDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALL
Sbjct: 800 IFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALL 859
Query: 999 RPGRLDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDL-EAIAHMTEGFSGXXXXXXXX 1056
RPGR D+L+F R +L +L I+RK L V L + + H +G
Sbjct: 860 RPGRFDKLVFVGVNEDRASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGADLYSLCS 919
Query: 1057 XXXXXXVHEILNNIDSN-EPGKMPVIT--DALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
+ + +++ EPG ++ + LL++ A++ +PSVSE E LR I +F
Sbjct: 920 DAMTAALKRRVRDLEEGLEPGSSALLLTMEDLLQA-AARLQPSVSEQELLRYKRIQRKF 977
Score = 42 (19.8 bits), Expect = 6.6e-61, Sum P(2) = 6.6e-61
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 310 RLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSP 341
R YL H+ +YL T++L +P +P
Sbjct: 398 RAYLADSAHTSLYLVGSTLSLVPRLPSGDSTP 429
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 643 (231.4 bits), Expect = 4.1e-60, Sum P(2) = 4.1e-60
Identities = 184/542 (33%), Positives = 271/542 (50%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSN 646
L PG +L+ GPPGSGKT+ A L H++ V CS L + + L
Sbjct: 449 LTAPGSVLLRGPPGSGKTTAVTAACGRLG------LHLLKVPCSSLCADSSGAVETKLQA 502
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
S A P +++ L V+A + L ++DE + S
Sbjct: 503 AFSRARRCRPVVLL---LTAVDLLGRDRDGLGEDARVVATLRRL--LLDE--DPLTSH-- 553
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI- 765
P+ VA+ + +P + ++ F +++P + +R +IL+ L E+
Sbjct: 554 -PPLMVVATTSRAQDLPADVQTA--FPHELEVPVLSEGQRLSILQ--ALTAHLPLGQEVN 608
Query: 766 LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSD--SSFEKHIKPTLVRDDFSQAMHEF 823
L +A +C G+ DL L+ + AA R +S + + L F + E
Sbjct: 609 LAQLARRCAGFVVGDLYALLTHSSRAACTRIKNSGWAGGLSEEDEGELCAAGFP-LLAED 667
Query: 824 LPVAMRDITK--TSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
L A+ + + A G W DVGGL +++ I E I+LP + P + + LR
Sbjct: 668 LGQALEQLQSAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLG-LR- 725
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
RS +LL+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAA
Sbjct: 726 RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAA 785
Query: 938 PCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDA 995
PC++FFDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD
Sbjct: 786 PCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDP 845
Query: 996 ALLRPGRLDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDLEAIA-HMTEGFSGXXXXX 1053
ALLRPGR D+L+F R +L +L I+RK L V L A+ H +G
Sbjct: 846 ALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGADLYS 905
Query: 1054 XXXXXXXXXVHEILNNI-DSNEPGKMPVIT--DALLKSIASKARPSVSEAEKLRLYSIYG 1110
+ + ++ D EPG ++ + LL++ A++ +PSVSE E LR I
Sbjct: 906 LCADAMTAALKRRVRDLEDGLEPGSSALLLTMEDLLQA-AARLQPSVSEHELLRYKRIQR 964
Query: 1111 QF 1112
+F
Sbjct: 965 KF 966
Score = 158 (60.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 58/179 (32%), Positives = 78/179 (43%)
Query: 873 APLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSK 932
A L +VLL GPPG GKT V AA L + V L GA E ++ FS+
Sbjct: 447 ALLTAPGSVLLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSR 506
Query: 933 ATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV---NQFLTELDGVEVLTGVFVFAATSR 989
A P +L D + R D G RVV + L + D + + V A TSR
Sbjct: 507 ARRCRPVVLLLTAVDLLG--RDRDGLGEDARVVATLRRLLLDEDPLTSHPPLMVVATTSR 564
Query: 990 P-DL-LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
DL D P L+ + S +RL IL+ ++ LPL +V+L +A GF
Sbjct: 565 AQDLPADVQTAFPHELEVPVL----SEGQRLSILQALTAHLPLGQEVNLAQLARRCAGF 619
Score = 44 (20.5 bits), Expect = 4.1e-60, Sum P(2) = 4.1e-60
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 312 YLNAGLHSWVYLKKCTVNLKKEIPMVSLSP 341
YL A H+ VYL T++L +P +P
Sbjct: 389 YLAAASHTSVYLVGSTLSLVPGLPSGESTP 418
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 641 (230.7 bits), Expect = 6.8e-60, P = 6.8e-60
Identities = 180/536 (33%), Positives = 268/536 (50%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPG GKT++ VA + H L H++ V CS L E + L S A
Sbjct: 466 VLLRGPPGCGKTTV---VAAACSH---LGLHLLKVPCSSLCAESSGAVETKLQAIFSRAR 519
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P++++ L V+A+ + L+ E +SC P+
Sbjct: 520 RCRPAVLL---LTAVDLLGRDRDGLGEDARVMAVLRHLL-----LNEDPLNSCP--PLMV 569
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ + +P + ++ F +++PA + +R +IL L E+ L +A
Sbjct: 570 VATTSRAQDLPADVQTA--FPHELEVPALSEGQRLSILR--ALTAHLPLGQEVNLAQLAR 625
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSD------SSFEKHIKPT---LVRDDFSQAMHE 822
+C G+ DL L+ + AA R +S E + L+ +DF QA+ +
Sbjct: 626 RCAGFVVGDLYALLTHSSRAACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQ 685
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
+ + W DVGGL +++ I E I+LP + P + + LR RS +L
Sbjct: 686 LQTAHSQAVGAPKIPS--VSWHDVGGLQEVKKEILETIQLPLEHPELLSLG-LR-RSGLL 741
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
L+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++F
Sbjct: 742 LHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIF 801
Query: 943 FDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRP 1000
FDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALLRP
Sbjct: 802 FDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRP 861
Query: 1001 GRLDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDLEAIAHMTEG-FSGXXXXXXXXXX 1058
GR D+L+F R +L +L I+RK L V L + +G
Sbjct: 862 GRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDA 921
Query: 1059 XXXXVHEILNNIDSN-EPGKMPV-ITDALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
+ +++++ EPG + +T L A++ +PSVSE E LR I +F
Sbjct: 922 MTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAARLQPSVSEQELLRYKRIQRKF 977
Score = 181 (68.8 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 58/173 (33%), Positives = 79/173 (45%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S+VLL GPPGCGKT +V AA + L + V L + GA E ++ IFS+A P
Sbjct: 464 SSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRP 523
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVV---NQFLTELDGVEVLTGVFVFAATSRP-DL-L 993
+L D + R D G RV+ L D + + V A TSR DL
Sbjct: 524 AVLLLTAVDLLG--RDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPA 581
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
D P L+ S +RL IL+ ++ LPL +V+L +A GF
Sbjct: 582 DVQTAFPHELEVPAL----SEGQRLSILRALTAHLPLGQEVNLAQLARRCAGF 630
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 651 (234.2 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 170/545 (31%), Positives = 284/545 (52%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L++GP G GK +L VAK + H+ V C +L + N + +A
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMG------IHVYEVDCYKLYDFVESKKDWNIRNVLEQAS 723
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG--PI 710
+ P+++I N L++ L++I+ + + S+ P+
Sbjct: 724 NSTPTLLILKNFEVLEQTAQSMQQEKKESN---LSQTLINILKDINDSNTSNINSNKYPL 780
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILL-DV 769
+ S++++ + + F + L +P ++R IL++ + ++ + + + ++
Sbjct: 781 IITVTVNSMDELSNKVRNW--FKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNL 838
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMR 829
+ + + +L L+ R+ A+ R L IKP + + M + + ++
Sbjct: 839 SIRTASFLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLS 898
Query: 830 DITK--TSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLL 883
++ + +S+ G WDDVGGL ++++ I + I+LP + P++FA + RS +LL
Sbjct: 899 EMQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASG-IGKRSGILL 957
Query: 884 YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFF 943
+GPPG GKT + A A CSL F+SVKGPEL+N YIG SE+ +R+IF+KA A PC++FF
Sbjct: 958 FGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFF 1017
Query: 944 DEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPG 1001
DE DS+AP RG+ D+ GV DRVV+Q L ELDG++ + VF+ AT+RPDLLD++L+RPG
Sbjct: 1018 DELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPG 1077
Query: 1002 RLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDL-EAIAHMTEGFSGXXXXXXXXXXX 1059
RLDRLL+ S +E + IL+ ++RK LADDVDL + + + +G
Sbjct: 1078 RLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAM 1137
Query: 1060 XXXVHE-----ILNNIDSNEPG-KMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFL 1113
HE I I+ E K+ V + +K++ S PSVS E + + QF
Sbjct: 1138 SNAFHERITASINGEINEEEQNQKLIVYQNHFIKAVNSLV-PSVSLDELEYYHKVQKQFS 1196
Query: 1114 DSKKS 1118
+ KS
Sbjct: 1197 GNNKS 1201
Score = 43 (20.2 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 17/92 (18%), Positives = 36/92 (39%)
Query: 243 ELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSVAKGH 302
+++ LP ++ NN NN +N + + + + KE + +
Sbjct: 242 KILNTLPSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKEEEVEEEEVEVEEEEKDNK 301
Query: 303 VKIARALRLYLNAGLHSWVYLKKCTVNLKKEI 334
+K+ LRL N +H + + T ++I
Sbjct: 302 LKLNNNLRLS-NFIIHPIINISNNTTTKNEDI 332
Score = 40 (19.1 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 491 TFSEESLHGGKNNAYELTLEARGQQNNNTEAV 522
T E + G NN + T ++G +NN + +
Sbjct: 326 TTKNEDI-GDSNNLFHFTPSSKGILSNNKKFI 356
Score = 40 (19.1 bits), Expect = 3.2e-59, Sum P(3) = 3.2e-59
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 251 LSSKENNPENNAPRIKSNLTSKEIS 275
+ + NN NN ++KS L S S
Sbjct: 99 IHNSNNNNNNNNNKLKSVLISNSCS 123
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 631 (227.2 bits), Expect = 9.0e-59, P = 9.0e-59
Identities = 178/535 (33%), Positives = 265/535 (49%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRTVETKLQTTFSRAR 519
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P +++ L V+A + L ++DE S C P+
Sbjct: 520 RCRPVVLL---LTALDLLGRDRDGLGEDARVVATLRHL--LLDE---DPLSRCP--PLMV 569
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ ++ +P + ++ F +++P + S+R ++L+ L E+ L +A
Sbjct: 570 VATTSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQ--ALTAHLPLGQEVNLSQLAR 625
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRY----LHSDSSFEKHIKPT---LVRDDFSQAMHEFL 824
+C G+ DL L+ AA R L E + L+ +DF QA+ +
Sbjct: 626 RCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQ 685
Query: 825 PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLY 884
+ + W DVGGL D++ I E I+LP + P + + LR RS +LL+
Sbjct: 686 TAHSQAVGAPKIPS--VSWHDVGGLQDVKKEILETIQLPLEHPELLSLG-LR-RSGLLLH 741
Query: 885 GPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFD 944
GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++FFD
Sbjct: 742 GPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFD 801
Query: 945 EFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGR 1002
E DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALLRPGR
Sbjct: 802 ELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGR 861
Query: 1003 LDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDLEAIAHMTEG-FSGXXXXXXXXXXXX 1060
D+L+F R +L +L I+RK L V L + +G
Sbjct: 862 FDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMM 921
Query: 1061 XXVHEILNNIDSN-EPGKMPVIT--DALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
+ + +++ EP ++ + LL++ A++ +PSVSE E LR I +F
Sbjct: 922 TALKRRVRDLEEGLEPRSSALLLTMEDLLQA-AARLQPSVSEQELLRYKRIQRKF 975
Score = 155 (59.6 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 65/216 (30%), Positives = 91/216 (42%)
Query: 839 GRSG-WDDVG--GLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIV 895
GRS WD + GL + N + +++ P P L S VLL GPPG GKT V
Sbjct: 425 GRSPPWDSLSPPGLEALVNELCAVLK-PHLQPG---GTLLTGTSCVLLQGPPGSGKTTAV 480
Query: 896 GAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH 955
AA + L + V L E ++ FS+A P +L D + R
Sbjct: 481 TAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLG--RDR 538
Query: 956 DNTGVTDRVV---NQFLTELDGVEVLTGVFVFAATSR-PDL-LDAALLRPGRLDRLLFCD 1010
D G RVV L + D + + V A TSR DL D P L+ +
Sbjct: 539 DGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDVRTAFPHELEVPVL-- 596
Query: 1011 FPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
S +RL +L+ ++ LPL +V+L +A GF
Sbjct: 597 --SESQRLSVLQALTAHLPLGQEVNLSQLARRCAGF 630
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 631 (227.2 bits), Expect = 9.0e-59, P = 9.0e-59
Identities = 178/535 (33%), Positives = 265/535 (49%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRTVETKLQTTFSRAR 519
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P +++ L V+A + L ++DE S C P+
Sbjct: 520 RCRPVVLL---LTALDLLGRDRDGLGEDARVVATLRHL--LLDE---DPLSRCP--PLMV 569
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ ++ +P + ++ F +++P + S+R ++L+ L E+ L +A
Sbjct: 570 VATTSRVQDLPTDVRTA--FPHELEVPVLSESQRLSVLQ--ALTAHLPLGQEVNLSQLAR 625
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRY----LHSDSSFEKHIKPT---LVRDDFSQAMHEFL 824
+C G+ DL L+ AA R L E + L+ +DF QA+ +
Sbjct: 626 RCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQ 685
Query: 825 PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLY 884
+ + W DVGGL D++ I E I+LP + P + + LR RS +LL+
Sbjct: 686 TAHSQAVGAPKIPS--VSWHDVGGLQDVKKEILETIQLPLEHPELLSLG-LR-RSGLLLH 741
Query: 885 GPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFD 944
GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++FFD
Sbjct: 742 GPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFD 801
Query: 945 EFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGR 1002
E DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALLRPGR
Sbjct: 802 ELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGR 861
Query: 1003 LDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDLEAIAHMTEG-FSGXXXXXXXXXXXX 1060
D+L+F R +L +L I+RK L V L + +G
Sbjct: 862 FDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMM 921
Query: 1061 XXVHEILNNIDSN-EPGKMPVIT--DALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
+ + +++ EP ++ + LL++ A++ +PSVSE E LR I +F
Sbjct: 922 TALKRRVRDLEEGLEPRSSALLLTMEDLLQA-AARLQPSVSEQELLRYKRIQRKF 975
Score = 155 (59.6 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 65/216 (30%), Positives = 91/216 (42%)
Query: 839 GRSG-WDDVG--GLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIV 895
GRS WD + GL + N + +++ P P L S VLL GPPG GKT V
Sbjct: 425 GRSPPWDSLSPPGLEALVNELCAVLK-PHLQPG---GTLLTGTSCVLLQGPPGSGKTTAV 480
Query: 896 GAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH 955
AA + L + V L E ++ FS+A P +L D + R
Sbjct: 481 TAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLG--RDR 538
Query: 956 DNTGVTDRVV---NQFLTELDGVEVLTGVFVFAATSR-PDL-LDAALLRPGRLDRLLFCD 1010
D G RVV L + D + + V A TSR DL D P L+ +
Sbjct: 539 DGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDVRTAFPHELEVPVL-- 596
Query: 1011 FPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
S +RL +L+ ++ LPL +V+L +A GF
Sbjct: 597 --SESQRLSVLQALTAHLPLGQEVNLSQLARRCAGF 630
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 634 (228.2 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 177/537 (32%), Positives = 266/537 (49%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + + L S A
Sbjct: 466 VLLRGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSGAVEKKLQATFSRAR 519
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P +++ L V+A L ++ + E +SC P+
Sbjct: 520 RCRPVVLL---LTAVDLLGRNRDGLGEDARVVAT---LCHLLQD--EDPLTSCP--PLMV 569
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ + +P + ++ F +++P + +R ++L+ L E+ L +A
Sbjct: 570 VATTSQAQDLPADVQTA--FPHELEVPVLSEGQRLSVLQ--ALTAHLPLGQEVNLTQLAR 625
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHS------DSSFEKHIKPT---LVRDDFSQAMHE 822
+C G+ DL L+ + A R +S E + L+ +DF QA+ +
Sbjct: 626 RCAGFVVGDLYALLTHSSRVACTRIKNSGLAGGLSEEDEGELCAAGFPLLAEDFGQALEQ 685
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
+ I W DVGGL +++ I E I+LP + P + + LR RS +L
Sbjct: 686 LQTAHSQAIGAPKIPS--VSWHDVGGLQEVKKEILETIQLPLEHPELLSLG-LR-RSGLL 741
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
L+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++F
Sbjct: 742 LHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIF 801
Query: 943 FDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRP 1000
FDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALLRP
Sbjct: 802 FDELDSLAPSRGRNGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRP 861
Query: 1001 GRLDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDL-EAIAHMTEGFSGXXXXXXXXXX 1058
GR D+L+F R +L +L I+RK L V L + +G
Sbjct: 862 GRFDKLVFVGVSEDRASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLYSLCSDA 921
Query: 1059 XXXXVHEILNNIDSN-EPGKMPVIT--DALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
+ + +++ EPG ++ D LL++ A++ +PSVSE E LR I +F
Sbjct: 922 MTTALKRRVRDLEEGLEPGSSTLLLTMDDLLQA-AARLQPSVSEQELLRYKRIQRKF 977
Score = 162 (62.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 56/173 (32%), Positives = 78/173 (45%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S+VLL GPPG GKT V AA + L + V L GA E+ ++ FS+A P
Sbjct: 464 SSVLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQATFSRARRCRP 523
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTG---VFVFAATSRP-DL-L 993
+L D + R D G RVV L + LT + V A TS+ DL
Sbjct: 524 VVLLLTAVDLLG--RNRDGLGEDARVVATLCHLLQDEDPLTSCPPLMVVATTSQAQDLPA 581
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
D P L+ + S +RL +L+ ++ LPL +V+L +A GF
Sbjct: 582 DVQTAFPHELEVPVL----SEGQRLSVLQALTAHLPLGQEVNLTQLARRCAGF 630
Score = 41 (19.5 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 245 VAILPRLSSKENNPENN 261
++++PRL+S E+ P N+
Sbjct: 416 LSLVPRLTSGESTPWNS 432
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 606 (218.4 bits), Expect = 3.8e-58, P = 3.8e-58
Identities = 208/681 (30%), Positives = 314/681 (46%)
Query: 466 PASCNGALENKTKARELRT-------EIFCVLTFS-EESLHGGKNNAY---ELTLEARGQ 514
PA C A+ ++ R +T ++ CV TF E L G + EL + R +
Sbjct: 28 PAYCARAVYDRLLYRHFQTPRLVQEGDVLCVPTFGCAEFLDGNADKFLRWPELYFKVR-K 86
Query: 515 QNNNTEAVRQLFGKLNSGDSVSFYTVKERGST-QGFDSNVSSLSWMGTTA---SDVINRI 570
E + Q G L + S Y V S + S W + SDV+ I
Sbjct: 87 VLGTVEGM-QSEGYLADTQNTSLYLVGSTNSAVPSAPAYTSHEFWSSLSPAGLSDVVKEI 145
Query: 571 KVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCS 630
L P L L G +L+ GP GSGKT +AV L H+ V C
Sbjct: 146 CDALRPH--LTSQAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLN------LHLFKVDCV 197
Query: 631 RLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFL 690
L + + + ++A + P +++ ++ VIA + L
Sbjct: 198 SLCGDTSAATEEKIHMAFAQAQQYHPCVLLLKDIEVLGRDRDRLGEDAR---VIATLRQL 254
Query: 691 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
++D + +SS P+ + + + +P + ++ F V++ A + +R+A+L
Sbjct: 255 --LLDR--DPAQSS---HPVLVIGTTCKPQDVPTDVQTA--FLHEVKIEALSEDQRRAML 305
Query: 751 EHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP 809
+ SL E+ L +A + G+ D L+ + AA R SF +
Sbjct: 306 S--MLTASLPLGKEVSLAKLARRTAGFVLGDFCALLSHSSRAACTRI--QALSFPGGLNE 361
Query: 810 TLVRDDFSQA----MHEFLPVAMRDI--TKTSAEGGRS----GWDDVGGLTDIQNAIKEM 859
+ RD F A + E VA+ + + A G W DVGGL +++ I +
Sbjct: 362 EVERD-FCTAGFPVLEEDFNVALDQLHDAHSQAVGAPKIPSVSWQDVGGLHEVKKEILDT 420
Query: 860 IELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYI 919
I+LP + P + + RS +LLYGPPG GKT + A A C++ F+SVKGPEL+N Y+
Sbjct: 421 IQLPLEHPELLSLG--LCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYV 478
Query: 920 GASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEV 977
G SE+ VR++F++A AAAPC++FFDE DS+AP RG D+ GV DRVV+Q L ELDG+
Sbjct: 479 GQSEENVRNVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHS 538
Query: 978 LTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDL 1036
VFV AT+RPDLLD ALLRPGR D+L++ RE +L +L ++RK L V+L
Sbjct: 539 SREVFVIGATNRPDLLDPALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFKLDPSVNL 598
Query: 1037 EAI-----AHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITDALLKSIAS 1091
+I A +T V I +D+ + + D L A+
Sbjct: 599 SSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWIEEGLDTESSALILTMEDFL--QAAA 656
Query: 1092 KARPSVSEAEKLRLYSIYGQF 1112
+ +PSVSE E LR I +F
Sbjct: 657 RLQPSVSEQELLRYKLIQQKF 677
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 624 (224.7 bits), Expect = 5.7e-58, P = 5.7e-58
Identities = 183/538 (34%), Positives = 267/538 (49%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRAVETKLQATFSRAR 520
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P++++ L V A + L ++DE R C P+
Sbjct: 521 RCRPAVLL---LTAVDLLGRDRDGLGEDARVAATLRHL--LLDEDALSR---CP--PLMV 570
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILL-DVAS 771
VA+ ++ +P + ++ F +++P + ++R +IL+ L E+ L +A
Sbjct: 571 VATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQ--ALTAHLPLGQEVNLPQLAR 626
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSF------EKHIKPT---LVRDDFSQAMHE 822
+C G+ DL L+ T AA R S S+ E + L+ +DF QA+ +
Sbjct: 627 RCAGFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQ 686
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
L A S W DVGGL D++ I E I+LP + P + + LR RS +L
Sbjct: 687 -LQTAHSQAVGAPRIPSVS-WHDVGGLQDVKKEILETIQLPLEHPELLSLG-LR-RSGLL 742
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
L+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++F
Sbjct: 743 LHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIF 802
Query: 943 FDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRP 1000
FDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALLRP
Sbjct: 803 FDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRP 862
Query: 1001 GRLDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDLEAIA-----HMTEGFSGXXXXXX 1054
GR D+L+F R +L +L I+RK L V L + +T
Sbjct: 863 GRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDA 922
Query: 1055 XXXXXXXXVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
V ++ ++ + + D LL++ A++ +PSVSE E LR I +F
Sbjct: 923 MMTALKRRVRDLEEGLELRSSALLLTMED-LLQA-AARLQPSVSEQELLRYKRIQRKF 978
Score = 159 (61.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 67/220 (30%), Positives = 93/220 (42%)
Query: 835 SAEGGRSG-WDDVG--GLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGK 891
S GRS WD + GL + N + +++ P P L S VLL GPPG GK
Sbjct: 422 SLPSGRSPPWDSLSPPGLEALVNELCAILK-PHLQPG---GTLLTGTSCVLLQGPPGSGK 477
Query: 892 THIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAP 951
T V AA + L + V L A E ++ FS+A P +L D +
Sbjct: 478 TTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAVLLLTAVDLLG- 536
Query: 952 KRGHDNTGVTDRV---VNQFLTELDGVEVLTGVFVFAATSR-PDL-LDAALLRPGRLDRL 1006
R D G RV + L + D + + V A TSR DL D P L+
Sbjct: 537 -RDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTDVQTAFPHELEVP 595
Query: 1007 LFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
+ S +RL IL+ ++ LPL +V+L +A GF
Sbjct: 596 VL----SEAQRLSILQALTAHLPLGQEVNLPQLARRCAGF 631
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 551 (199.0 bits), Expect = 7.3e-58, Sum P(2) = 7.3e-58
Identities = 125/307 (40%), Positives = 180/307 (58%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF +A+ P A R+ T + WDD+G L +++ ++ I P K + FA
Sbjct: 506 EDFERALSTIQPAAKREGFATVPD---VSWDDIGALVEVRKQLEWSILYPIKRADDFAAL 562
Query: 874 PLRLR-SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSK 932
+ R +LL GPPGCGKT + A A + FISVKGPELLN Y+G SE+AVR +F +
Sbjct: 563 GIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQR 622
Query: 933 ATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDL 992
A + PC++FFDE D++ PKR H + R+VNQ LTE+DGVE VF+ AT+RPD+
Sbjct: 623 ARDSQPCVIFFDEIDALVPKRSHGESSGGARLVNQLLTEMDGVEGRQKVFLIGATNRPDI 682
Query: 993 LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK--LP-LADDVDLEAIAHMTE--GFS 1047
+DAA+LRPGRLD++LF DFPS +R+DIL+ ++ P L +D+D IA + E GF+
Sbjct: 683 VDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFT 742
Query: 1048 GXXXXXXXXXXXXXXVH-EILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLR-- 1104
G + +L N +S + M +A AS+ RPSV+EA++ +
Sbjct: 743 GADLAALIHESSLLALQARVLENDESVKGVGMRHFREA-----ASRIRPSVTEADRKKYE 797
Query: 1105 -LYSIYG 1110
+ IYG
Sbjct: 798 HMKKIYG 804
Score = 178 (67.7 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 44/151 (29%), Positives = 74/151 (49%)
Query: 824 LPVAMRDITKT-SAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
LP + ++ T S ++ +GG D Q + + K P FA + +
Sbjct: 185 LPRGLGAVSDTISPRESHVKFEHIGG-ADRQFLEVCRLAMHLKRPKTFATLGVDPPRGFI 243
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
++GPPGCGKT A A ++ + + EL++ G +E+ +R +F A +PC+L
Sbjct: 244 VHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILI 303
Query: 943 FDEFDSIAPKRGHDNTGVTDRVVNQFLTELD 973
D+ D+IAP+R + RVV+Q + LD
Sbjct: 304 LDDIDAIAPRRETAQREMERRVVSQLCSSLD 334
Score = 118 (46.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 30/91 (32%), Positives = 41/91 (45%)
Query: 980 GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAI 1039
GV V TSRPD +D L R GR + + P R IL+ I K+ LA DV L+ I
Sbjct: 370 GVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKIC-KVNLAGDVTLKQI 428
Query: 1040 AHMTEGFSGXXXXXXXXXXXXXXVHEILNNI 1070
A +T G+ G + + + I
Sbjct: 429 AKLTPGYVGADLQALIREAAKVAIDRVFDTI 459
Score = 115 (45.5 bits), Expect = 7.3e-58, Sum P(2) = 7.3e-58
Identities = 58/232 (25%), Positives = 94/232 (40%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F+T + P ++HGPPG GKT A+AVA L +A V S +S E IR
Sbjct: 231 FATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELV--SGVSGETEEKIR 288
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIM------- 694
+ A ++P I+I D++ V L L +++
Sbjct: 289 RLFDT----AKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDELVLPPREKP 344
Query: 695 --DE--YGEKRKSSC-GIGPIA------FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAA 743
D+ +G+ + G P A + + + + L +GRF+ + L P
Sbjct: 345 LKDQLTFGDDGSVAIIGDSPTAAGAGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDE 404
Query: 744 SERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGR 795
+ R+ ILE +I + +L D L +A GY DL+ L+ A+ R
Sbjct: 405 TAREKILE-KICKVNL-AGDVTLKQIAKLTPGYVGADLQALIREAAKVAIDR 454
Score = 37 (18.1 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 803 FEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSG 842
F H P + F+QA+ L + M + T G SG
Sbjct: 242 FIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSG 281
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 551 (199.0 bits), Expect = 7.3e-58, Sum P(2) = 7.3e-58
Identities = 125/307 (40%), Positives = 180/307 (58%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF +A+ P A R+ T + WDD+G L +++ ++ I P K + FA
Sbjct: 506 EDFERALSTIQPAAKREGFATVPD---VSWDDIGALVEVRKQLEWSILYPIKRADDFAAL 562
Query: 874 PLRLR-SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSK 932
+ R +LL GPPGCGKT + A A + FISVKGPELLN Y+G SE+AVR +F +
Sbjct: 563 GIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQR 622
Query: 933 ATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDL 992
A + PC++FFDE D++ PKR H + R+VNQ LTE+DGVE VF+ AT+RPD+
Sbjct: 623 ARDSQPCVIFFDEIDALVPKRSHGESSGGARLVNQLLTEMDGVEGRQKVFLIGATNRPDI 682
Query: 993 LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK--LP-LADDVDLEAIAHMTE--GFS 1047
+DAA+LRPGRLD++LF DFPS +R+DIL+ ++ P L +D+D IA + E GF+
Sbjct: 683 VDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFT 742
Query: 1048 GXXXXXXXXXXXXXXVH-EILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLR-- 1104
G + +L N +S + M +A AS+ RPSV+EA++ +
Sbjct: 743 GADLAALIHESSLLALQARVLENDESVKGVGMRHFREA-----ASRIRPSVTEADRKKYE 797
Query: 1105 -LYSIYG 1110
+ IYG
Sbjct: 798 HMKKIYG 804
Score = 178 (67.7 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 44/151 (29%), Positives = 74/151 (49%)
Query: 824 LPVAMRDITKT-SAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVL 882
LP + ++ T S ++ +GG D Q + + K P FA + +
Sbjct: 185 LPRGLGAVSDTISPRESHVKFEHIGG-ADRQFLEVCRLAMHLKRPKTFATLGVDPPRGFI 243
Query: 883 LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLF 942
++GPPGCGKT A A ++ + + EL++ G +E+ +R +F A +PC+L
Sbjct: 244 VHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILI 303
Query: 943 FDEFDSIAPKRGHDNTGVTDRVVNQFLTELD 973
D+ D+IAP+R + RVV+Q + LD
Sbjct: 304 LDDIDAIAPRRETAQREMERRVVSQLCSSLD 334
Score = 118 (46.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 30/91 (32%), Positives = 41/91 (45%)
Query: 980 GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAI 1039
GV V TSRPD +D L R GR + + P R IL+ I K+ LA DV L+ I
Sbjct: 370 GVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKIC-KVNLAGDVTLKQI 428
Query: 1040 AHMTEGFSGXXXXXXXXXXXXXXVHEILNNI 1070
A +T G+ G + + + I
Sbjct: 429 AKLTPGYVGADLQALIREAAKVAIDRVFDTI 459
Score = 115 (45.5 bits), Expect = 7.3e-58, Sum P(2) = 7.3e-58
Identities = 58/232 (25%), Positives = 94/232 (40%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F+T + P ++HGPPG GKT A+AVA L +A V S +S E IR
Sbjct: 231 FATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELV--SGVSGETEEKIR 288
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIM------- 694
+ A ++P I+I D++ V L L +++
Sbjct: 289 RLFDT----AKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDELVLPPREKP 344
Query: 695 --DE--YGEKRKSSC-GIGPIA------FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAA 743
D+ +G+ + G P A + + + + L +GRF+ + L P
Sbjct: 345 LKDQLTFGDDGSVAIIGDSPTAAGAGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDE 404
Query: 744 SERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGR 795
+ R+ ILE +I + +L D L +A GY DL+ L+ A+ R
Sbjct: 405 TAREKILE-KICKVNL-AGDVTLKQIAKLTPGYVGADLQALIREAAKVAIDR 454
Score = 37 (18.1 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 803 FEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSG 842
F H P + F+QA+ L + M + T G SG
Sbjct: 242 FIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSG 281
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 531 (192.0 bits), Expect = 1.0e-57, Sum P(2) = 1.0e-57
Identities = 122/296 (41%), Positives = 169/296 (57%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF A+ P A R+ T W D+G L DI+ + I P + P+ F
Sbjct: 437 NDFIVALSSVQPSAKREGFVTVPN---VTWADIGALEDIREELTMAILAPVRNPDQFKAL 493
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L + VLL GPPGCGKT + A A L FISVKGPELLN Y+G SE+AVR +F +A
Sbjct: 494 GLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 553
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+APC++FFDE D++ P+R TG + RVVNQ LTE+DG+E VF+ AAT+RPD++
Sbjct: 554 KNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDII 613
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIAH--MTEGFSG 1048
D A+LRPGRLD+ LF P P +RL ILK I++ K PL DV+LEAIA + ++G
Sbjct: 614 DPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTG 673
Query: 1049 XXXXXXXXXXXXXXVH-EILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKL 1103
+ E+ NE G++ V + + K R S+S+ +++
Sbjct: 674 ADLSALVREASICALRQEMARQKSGNEKGELKV-SHKHFEEAFKKVRSSISKKDQI 728
Score = 357 (130.7 bits), Expect = 9.2e-28, Sum P(2) = 9.2e-28
Identities = 87/252 (34%), Positives = 129/252 (51%)
Query: 843 WDDVGG--LTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
++DVGG +T ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 147 FEDVGGNDMT-LKEVCKMLIHM--RHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAG 203
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 960
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 204 ELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDM 263
Query: 961 TDRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 264 ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASR 323
Query: 1018 LDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGK 1077
IL+ + RKL L D +AH+T GF G V+ +L + + K
Sbjct: 324 ERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQK-K 382
Query: 1078 MPVITDALLKSI 1089
P + D K +
Sbjct: 383 NPEMEDLPSKGV 394
Score = 124 (48.7 bits), Expect = 1.0e-57, Sum P(2) = 1.0e-57
Identities = 59/262 (22%), Positives = 108/262 (41%)
Query: 540 VKERGSTQGFDSNVSSLSWMGTTASDV-INRI-KVLLSPDSGLWFSTYHLPL--PGHILI 595
++++ +G + +S++ + +D+ + + K+L+ + +HL + P +L+
Sbjct: 129 LQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVY--HHLGVVPPRGVLL 186
Query: 596 HGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHA 655
HGPPG GKT LA A+A L+ VA V S +S E Q L +A+ +A
Sbjct: 187 HGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQKLRELFEQAVSNA 240
Query: 656 PSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVAS 715
P I+ D + V L + D+ + R + + +
Sbjct: 241 PCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR--------VLVIGA 292
Query: 716 AQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDG 775
+ + +L +GRFD + L P + R+ IL+ ++ L + + +A G
Sbjct: 293 TNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFC-HLAHLTPG 351
Query: 776 YDAYDLEILVDRTVHAAVGRYL 797
+ DL L AV R L
Sbjct: 352 FVGADLMALCREAAMCAVNRVL 373
Score = 39 (18.8 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 388 DDIIAALSS-EPSSKED 403
+D I ALSS +PS+K +
Sbjct: 437 NDFIVALSSVQPSAKRE 453
Score = 38 (18.4 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 267 SNLTSKEISGGASTDKKECRQAVVHL 292
SN+ +++ G T K+ C+ ++H+
Sbjct: 143 SNVKFEDVGGNDMTLKEVCKM-LIHM 167
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 545 (196.9 bits), Expect = 2.3e-57, Sum P(3) = 2.3e-57
Identities = 108/237 (45%), Positives = 158/237 (66%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF A + P AMR++ E + W+DVGG +++N + E +E P K + F +
Sbjct: 697 EDFENAKTKIRPSAMREVI---LEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRI 753
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
R S +L++GPPGC KT + A A+ L F++VKGPEL +K++G SE+AVR +F+KA
Sbjct: 754 GTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKA 813
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVT--DRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
A AP ++FFDE DS+A RG +N GV+ DRV++Q L ELDG+ GV V AAT+RPD
Sbjct: 814 RANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPD 873
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+D+ALLRPGR DRLL+ P+ +R ILK+ RK+P + D+ L+ +A +T+G++G
Sbjct: 874 KIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTG 930
Score = 363 (132.8 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 88/259 (33%), Positives = 141/259 (54%)
Query: 799 SDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEG-----GRS-GWD--DVGGLT 850
SD+S H ++ + +H L +A +T +G G + G + +GGL+
Sbjct: 334 SDTSNRNHA--FMINQETKVYLHHTLDLASEIQGRTFVQGLQFDEGENVGCEISKLGGLS 391
Query: 851 DIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVK 910
++++I+ S N + LR VL++GPPG GKT + A + F SV
Sbjct: 392 KEYAILRDIID-SSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVN 450
Query: 911 GPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLT 970
GPE++++Y+G SE+A+ ++F A+ A P ++F D+ D+IAP R ++ R+V L
Sbjct: 451 GPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLN 510
Query: 971 ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPL 1030
+DG+ GV V AAT+RPD ++ AL RPGRLDR + PS +R DIL +I R +
Sbjct: 511 LMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRH 570
Query: 1031 A-DDVDLEAIAHMTEGFSG 1048
+ ++ +E +A T GF G
Sbjct: 571 SLSNIQVEQLAMATHGFVG 589
Score = 146 (56.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 53/222 (23%), Positives = 101/222 (45%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL+ GPPG KT +A+AVA + + + V L + +A+ + +
Sbjct: 758 PSGILMFGPPGCSKTLMARAVASEAK------LNFLAVKGPELFSKWVGESEKAVRSLFA 811
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
+A +APSI+ FD + + +++ LV++ D ++ +G
Sbjct: 812 KARANAPSIIFFDEIDSLASIRGKENDGVSVSDRV-MSQLLVEL-DGLHQR------VG- 862
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ +A+ +KI +L GRFD + + P ++R+AIL+ +++ SD L ++
Sbjct: 863 VTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCS-SDICLKEL 921
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL 811
AS GY D+ ++ AA+ L + +H+K +
Sbjct: 922 ASITKGYTGADISLICREAAIAALEESLEMEEISMRHLKAAI 963
Score = 93 (37.8 bits), Expect = 2.3e-57, Sum P(3) = 2.3e-57
Identities = 37/130 (28%), Positives = 60/130 (46%)
Query: 486 IFCVLTFSEE-SLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTVKERG 544
IFCV + S +N+A+ + E + ++ + ++ G+ + F + G
Sbjct: 323 IFCVKRADKRPSDTSNRNHAFMINQETKVYLHHTLDLASEIQGR-TFVQGLQF----DEG 377
Query: 545 STQGFD-SNVSSLSWMGTTASDVINRIKVLLSPDS-GLWFSTYHLPLPGHILIHGPPGSG 602
G + S + LS D+I+ + S S GL P G +LIHGPPG+G
Sbjct: 378 ENVGCEISKLGGLSKEYAILRDIIDSSSIKNSLSSLGL------RPTKG-VLIHGPPGTG 430
Query: 603 KTSLAKAVAK 612
KTSLA+ A+
Sbjct: 431 KTSLARTFAR 440
Score = 80 (33.2 bits), Expect = 2.3e-57, Sum P(3) = 2.3e-57
Identities = 36/162 (22%), Positives = 62/162 (38%)
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+AL A + P++V D+L V L +++MD G R
Sbjct: 464 KALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEELSQRMVATL----LNLMD--GISR 517
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+ +A+ + I +L GR D +++ P++++R IL H I R
Sbjct: 518 TDG-----VVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDIL-HIILRGMRHS 571
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSS 802
I ++ +A G+ DL L + R+L SS
Sbjct: 572 LSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQSSS 613
Score = 54 (24.1 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 20/82 (24%), Positives = 34/82 (41%)
Query: 207 GLSHKCNVKGVELGVALTSVAFINPETAENVSLCSLELVAI---LPRLSSKENNPENNAP 263
G+ H + VE +A+ + F+ + + C V + L + SS N P AP
Sbjct: 567 GMRHSLSNIQVEQ-LAMATHGFVGADLS--ALCCEAAFVCLRRHLDQSSSSSNLPLEEAP 623
Query: 264 RIKSNLTSKEISGGASTDKKEC 285
+S+ +IS +S C
Sbjct: 624 IAESSSNMSDISSDSSDSASSC 645
Score = 47 (21.6 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 620 LVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
++ VF C R S E +R+ LSN S+ L
Sbjct: 261 IIEDSVFSCKQRFSSESSIDLREVLSNESSKKL 293
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 597 (215.2 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 151/484 (31%), Positives = 248/484 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F T ++ P IL+ GPPG+GKT L + V + + ++ + C+++S
Sbjct: 313 FKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYD------IEMISIDCAKISGSYIGETE 366
Query: 642 QALSNFISEALD------HAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMD 695
+ L N EA D ++P +V D + V+ +FL ++D
Sbjct: 367 ENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQNESR--VVG--QFLT-LLD 421
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G ++ G + +A+ +I +L GR D +++P P +R IL+
Sbjct: 422 GIGARK------GNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRLDILKLYCS 475
Query: 756 RRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRY-----LHSDSSFEKHIKP 809
+ + + LLD +A + GY +++ L + A +Y +++ + ++ K
Sbjct: 476 KLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAFSKYNLLKYQNNEQNENENEKK 535
Query: 810 TLVR-DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
L+ +DF +++ P ++ WDD+GGL DI+ +++ IE P+ +
Sbjct: 536 YLIEIEDFRESIKNN-PASILKGEHLVENISNVSWDDIGGLDDIKEELRQAIEWPNLYKE 594
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + L ++LYGPPGC KT +V A A++ L F+S+ G + + Y+G SEQ +RD
Sbjct: 595 SFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSEQTIRD 654
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRG-HDNTG---VTDRVVNQFLTELDGVEVLTGVFVF 984
IF KA P +LFFDE D+I KR DN+ RV++ FL E+DGVE L GV V
Sbjct: 655 IFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVI 714
Query: 985 AATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTE 1044
AT+R D++D ALLRPGR D++L P RL ILK+ ++ +PL+D+V+L I+++T
Sbjct: 715 GATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSIPLSDNVNLIEISNLTN 774
Query: 1045 GFSG 1048
GFSG
Sbjct: 775 GFSG 778
Score = 352 (129.0 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 82/212 (38%), Positives = 122/212 (57%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL + ++EM+ P FP +F + +LL GPPG GKTH+V A +
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKAT------AAAPCLLFFDEFDSIAPKRGHDNTG 959
IS+ ++ YIG +E+ +R+IF +A+ + +P ++F DE D+I P R +T
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSK-STQ 407
Query: 960 VTDRVVNQFLTELDGVEVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
RVV QFLT LDG+ G + + AAT+RP+ +D AL RPGRLDR + P+ ++RL
Sbjct: 408 NESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRL 467
Query: 1019 DILKVISRKLPLADDVD--LEAIAHMTEGFSG 1048
DILK+ KLP++ L+ IA T G+ G
Sbjct: 468 DILKLYCSKLPISPTPSNLLDQIADETVGYVG 499
Score = 144 (55.7 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 57/242 (23%), Positives = 108/242 (44%)
Query: 552 NVSSLSWMGTTA-SDVINRIKVLLS-PDSGLW---FSTYHLPLPGHILIHGPPGSGKTSL 606
N+S++SW D+ ++ + P+ L+ F + L P I+++GPPG KT+L
Sbjct: 563 NISNVSWDDIGGLDDIKEELRQAIEWPN--LYKESFEKFGLSPPKGIILYGPPGCSKTTL 620
Query: 607 AKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII---RQALSNFISEALDHAPSIVIFDN 663
KAVA S + + F+ S ++ P + Q + + +A PSI+ FD
Sbjct: 621 VKAVASS--------SKLSFLSLSGATIFS-PYLGDSEQTIRDIFKKARQTTPSILFFDE 671
Query: 664 LXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIP 723
+ + ++ MD G ++ + + + + L+ I
Sbjct: 672 IDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMD--GVEQ-----LNGVIVIGATNRLDMID 724
Query: 724 QSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVASKCDGYDAYDLE 782
+L GRFD +++ P R IL+ I+ +S+ SD + L+++++ +G+ DLE
Sbjct: 725 NALLRPGRFDKILEIKLPDQLSRLKILK--IKTKSIPLSDNVNLIEISNLTNGFSGADLE 782
Query: 783 IL 784
L
Sbjct: 783 NL 784
Score = 50 (22.7 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 474 ENKTKARELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLF 526
+NK + + ++ F V + NN + + NNN E +R LF
Sbjct: 142 QNKKQNKSIKYPSF-VKIYKVNEFENNLNNVDIEIIVSNNNNNNNNENIRTLF 193
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 598 (215.6 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 189/620 (30%), Positives = 279/620 (45%)
Query: 514 QQNNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLSWMGTTASD-VINRI-K 571
++ + + RQ KL S ++ +GF+ SS+ + SD + + K
Sbjct: 182 KEKKSVKQKRQKKNKLEEDSETSAGVPAKKSKVKGFELQFSSVKFEDFGGSDETLEEVCK 241
Query: 572 VLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSR 631
+L+ + + P L+HGPPG GKT LA+AVA E L+ S
Sbjct: 242 LLIHMRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAG--ETALPLLKISAPELVSG 299
Query: 632 LSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLV 691
+S E Q L +A+ AP I+ D + V L +
Sbjct: 300 VSGES----EQKLRELFEQAISSAPCILFIDEIDAITPKRETASKDMERRIVAQL----L 351
Query: 692 DIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILE 751
MD+ + + + + + + + +L +GRFD + L P R IL+
Sbjct: 352 TCMDDLNSMLEPA----QVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEGARMKILK 407
Query: 752 HEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL 811
++ L D +A GY DL L AV R L ++ E I PTL
Sbjct: 408 TLCRKIRLP-DDFDFRHLARLTPGYVGADLMALCREAAMNAVNRILLEPTT-EDQITPTL 465
Query: 812 --------VRDDFSQAMHEF--LPVAMRD----ITKTSAEGGRSG--------WDDVGGL 849
++ S + + L V M D + + R G W DVG L
Sbjct: 466 ALARLLDLLKSSVSLSEDQLAALCVLMSDFSSSLVRVQPSAKREGFATVPDVTWADVGAL 525
Query: 850 TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
D++ + I P + P F L + +LL GPPGCGKT + A A A L FISV
Sbjct: 526 QDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISV 585
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFL 969
KGPELLN Y+G SE+AVR +F + +APC++FFDE D++ P+R +G + RVVNQ L
Sbjct: 586 KGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGASVRVVNQLL 645
Query: 970 TELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR--- 1026
TE+DG+E VF+ AAT+RPD++D A+LRPGRLD+ L+ P +R IL I++
Sbjct: 646 TEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILNTITKGGT 705
Query: 1027 KLPLADDVDLEAIAH--MTEGFSGXXXXXXXXXXXXXXVHEILNNIDSN-EPGKMPVITD 1083
K L DV LE IAH E F+G + L+ ++ E K ++
Sbjct: 706 KPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALRVHLDPAQTHTESAKDIRVSR 765
Query: 1084 ALLKSIASKARPSVSEAEKL 1103
+ K RPSVS+ ++L
Sbjct: 766 VHFEDAFKKVRPSVSKKDQL 785
Score = 372 (136.0 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 92/277 (33%), Positives = 141/277 (50%)
Query: 843 WDDVGGLTD-IQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++D GG + ++ K +I + + P ++ + + LL+GPPGCGKT + A A
Sbjct: 226 FEDFGGSDETLEEVCKLLIHM--RHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGE 283
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+L + + PEL++ G SEQ +R++F +A ++APC+LF DE D+I PKR + +
Sbjct: 284 TALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEIDAITPKRETASKDME 343
Query: 962 DRVVNQFLTELDGVEVL---TGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R+V Q LT +D + + V V AT+RPD LD AL R GR DR + P R+
Sbjct: 344 RRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEGARM 403
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKM 1078
ILK + RK+ L DD D +A +T G+ G V+ IL + E
Sbjct: 404 KILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMALCREAAMNAVNRILLE-PTTEDQIT 462
Query: 1079 PVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDS 1115
P + A L + K+ S+SE + L + F S
Sbjct: 463 PTLALARLLDLL-KSSVSLSEDQLAALCVLMSDFSSS 498
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 541 (195.5 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 124/299 (41%), Positives = 171/299 (57%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF A+ E P A R+ T W DVG L DI+ + I P + P F
Sbjct: 553 NDFIVALSEVQPSAKREGFVTVPN---VTWADVGALEDIREELTMAILAPVRNPEQFRAL 609
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L + VLL GPPGCGKT + A A L FISVKGPELLN Y+G SE+AVR +F +A
Sbjct: 610 GLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 669
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+APC++FFDE D++ P+R TG + RVVNQ LTE+DG+E VF+ AAT+RPD++
Sbjct: 670 KNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDII 729
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIA--HMTEGFSG 1048
D A+LRPGRLD+ LF P P +R+ ILK I++ K PL +DVDLEAIA H + ++G
Sbjct: 730 DPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVDLEAIANDHRCDCYTG 789
Query: 1049 XXXXXXXXXXXXXXVHEILNNIDSNEPGKMPV-ITDALLKSIASKARPSVSEAEKLRLY 1106
+ + + N G + ++ + K +PS+S ++ R+Y
Sbjct: 790 ADLSALVREASLCALRQEITG-QKNGIGTAELTVSHKHFEEAFRKVKPSISVKDQ-RMY 846
Score = 360 (131.8 bits), Expect = 3.5e-29, P = 3.5e-29
Identities = 83/229 (36%), Positives = 120/229 (52%)
Query: 843 WDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++DVGG ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 263 FEDVGGNDATLKEVCKMLIHM--RHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
L + V PE+++ G SEQ +RD+F +A + APC++F DE D+I PKR + +
Sbjct: 321 LDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVASKDME 380
Query: 962 DRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEASRE 440
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEIL 1067
IL+ + RKL L + + +AH+T GF G VH +L
Sbjct: 441 RILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHRVL 489
Score = 124 (48.7 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 67/290 (23%), Positives = 117/290 (40%)
Query: 511 ARGQQNNN-TEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLSWMGTTASDV-IN 568
A+G+ N TE +++ G++ + +++R + + +SS+ + +D +
Sbjct: 222 AKGKGNKRKTEGLQEADGEIEA-------ILQKRAKAKSTELQISSVKFEDVGGNDATLK 274
Query: 569 RI-KVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFV 627
+ K+L+ + + P +L+HGPPG GKT LA A+A L+ VA V
Sbjct: 275 EVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV 334
Query: 628 CCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALT 687
S +S E Q L + +A+ +AP IV D + V L
Sbjct: 335 --SGVSGES----EQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLL 388
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ D+ + R + V + + + +L +GRFD V L P + R+
Sbjct: 389 TCMDDLNNVAATAR--------VLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEASRE 440
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL 797
IL+ ++ L + +A G+ DL L AV R L
Sbjct: 441 RILQTLCRKLRLPETFNFS-HLAHLTPGFVGADLMALCREAAVCAVHRVL 489
Score = 41 (19.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 20 LKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVA 54
L+L ET + AHL P + +L + + V A
Sbjct: 450 LRLPETFNFSHLAHLTPGFVGADLMALCREAAVCA 484
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 499 (180.7 bits), Expect = 4.7e-57, Sum P(3) = 4.7e-57
Identities = 101/239 (42%), Positives = 148/239 (61%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF +A+ P A R+ T + W +VG L ++ + I P K P ++ +
Sbjct: 506 EDFLKALPTIQPTAKREGFATVPD---VTWANVGALQRVRLELNMAIVQPIKRPELYEKV 562
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
+ VLL+GPPGCGKT + A A FIS+KGPELLNKY+G SE+++R +F++A
Sbjct: 563 GISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRA 622
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
A+ PC++FFDE D++ P+R + + RVVN LTELDG+ G+FV AT+RPD++
Sbjct: 623 RASVPCVIFFDELDALVPRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMI 682
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRK--LPLADDVDLEAIAHMTE--GFSG 1048
D A+LRPGRLD+ LF + P+ E+LDI+K +++ PL+ DVD E I + FSG
Sbjct: 683 DPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSG 741
Score = 394 (143.8 bits), Expect = 1.6e-32, Sum P(3) = 1.6e-32
Identities = 88/213 (41%), Positives = 121/213 (56%)
Query: 841 SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
S +GG+ D+ + E+I LP P IF + VLL+GPPGCGKT I A A
Sbjct: 202 SSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAG 261
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR-GHDNTG 959
+ FIS+ P +++ G SE+ +RD+F +A + APCL+FFDE D+I PKR G
Sbjct: 262 ELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQRE 321
Query: 960 VTDRVVNQFLTELDGV--EVLTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
+ R+V Q LT +D + E G V + AT+RPD LDAAL R GR DR + + P+
Sbjct: 322 MERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEV 381
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RL ILK +S L + +D +A +T GF G
Sbjct: 382 SRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVG 414
Score = 159 (61.0 bits), Expect = 4.7e-57, Sum P(3) = 4.7e-57
Identities = 72/306 (23%), Positives = 127/306 (41%)
Query: 519 TEAVRQLFGKLNSGD-SVSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINRIKV-LLSP 576
TE V++ + G V +KE S +S++ SL M + ++ I + +L P
Sbjct: 171 TEEVKKSKKRSKEGTCKVKRQKIKEDRSPP--NSSLKSLGGMDDVVAQLMELIGLPILHP 228
Query: 577 DSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK 636
+ ++ ST P P +L+HGPPG GKTS+A A+A L+ + F+ S S+
Sbjct: 229 E--IFLSTGVEP-PRGVLLHGPPGCGKTSIANALAGELQ--------VPFISISAPSVVS 277
Query: 637 GPI--IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIM 694
G + + + EA AP +V FD + ++A L+ M
Sbjct: 278 GMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQ---LLTSM 334
Query: 695 DEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI 754
DE ++ + P+ + + + + +L +GRFD + L P R IL+
Sbjct: 335 DELTMEKTNG---KPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMS 391
Query: 755 QRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRD 814
++ + + +A G+ DL+ LV A+ R + ++ + PT D
Sbjct: 392 DNLKIDGAIDFA-KLAKLTPGFVGADLKALVTAAGTCAIKRIFQTYANIKS--TPTTATD 448
Query: 815 DFSQAM 820
M
Sbjct: 449 SSEDNM 454
Score = 52 (23.4 bits), Expect = 4.7e-57, Sum P(3) = 4.7e-57
Identities = 14/52 (26%), Positives = 30/52 (57%)
Query: 1076 GKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAK 1127
G+ ++T + +S K +PSVS+ ++L+ Y + L+ K + + +DA+
Sbjct: 787 GEEIIVTMSDFRSALRKIKPSVSDKDRLK----YDR-LNKKMGLTEEMKDAE 833
Score = 40 (19.1 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 11/48 (22%), Positives = 25/48 (52%)
Query: 610 VAKSLEHHKDLVAHIVFVCC--SRLSLE--KGPIIRQALSNFISEALD 653
+ +S+ KDL A +F C LSL+ K ++++ + + + ++
Sbjct: 58 IFESMFFAKDLTAGEIFTFCLTKDLSLQRVKKVVLQKTIDRMLKDVIE 105
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 541 (195.5 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 109/270 (40%), Positives = 158/270 (58%)
Query: 808 KPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFP 867
K T+ F A++ P ++R+ + W+D+GG+ +++ +KE I P ++
Sbjct: 901 KLTIKAKHFQHALNICNPSSLRE---RQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYK 957
Query: 868 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 927
+++ + +LLYGPPGCGKT + A A C FISVKGPELL + G SE VR
Sbjct: 958 HLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVR 1017
Query: 928 DIFSKATAAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
D+F KA AA+PC++FFDE DS+A +R + N +DRV+NQ LTE+DG+ +F+ AA
Sbjct: 1018 DLFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAA 1077
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
T+RPD+LD AL RPGRLD+L++ P + R I K I + PL +DVD+ +A TEGF
Sbjct: 1078 TNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGF 1137
Query: 1047 SGXXXXXXXXXXXXXXVHEILN--NIDSNE 1074
SG + E ++ NI E
Sbjct: 1138 SGADITNLCQSAVNEAIKETIHLLNIRKKE 1167
Score = 413 (150.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 90/232 (38%), Positives = 131/232 (56%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GG+ N I+E+IELP K+P IF + VL++G PG GKT I A A
Sbjct: 526 YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANES 585
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ + GPE+++K+IG SEQ +R IF KA+ PC++F DE DSIA KR N +
Sbjct: 586 NAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK 645
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
RVV+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P + R +IL
Sbjct: 646 RVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILL 705
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNE 1074
++K+ L DV+L IA G+ G + E ++ +D +E
Sbjct: 706 TKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDE 757
Score = 91 (37.1 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 35/157 (22%), Positives = 60/157 (38%)
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q L +A + P I+ D + V L + +MD G K+
Sbjct: 607 QKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQL----LTLMD--GLKK 660
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD +++P P R IL + ++ L+
Sbjct: 661 NNN-----VLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLD- 714
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLH 798
D L +A +C GY DL L + ++H
Sbjct: 715 PDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIH 751
Score = 88 (36.0 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 501 KNNAYEL-TLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLSW- 558
KNN E L+ +++ N E FG + G+ +E + ++ N +++
Sbjct: 475 KNNKIEFKVLKIISEESENEE-----FGCI--GEHSQLTLAEEYLKREDYEENNDDITYE 527
Query: 559 -MGTTASDVINRIKVLLS-P-DSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
+G +N+I+ L+ P F + + P +L+HG PG+GKTS+AKA+A
Sbjct: 528 DLGGMKKQ-LNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Score = 53 (23.7 bits), Expect = 3.5e-53, Sum P(3) = 3.5e-53
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 501 KNNAYELTLEARGQQNNNTEAVRQLFGKLN-SGDSVSFYTVKERGSTQGFDSNVSS 555
KN +Y + + + NNNT Q+ K + S D++S Y + +G +N++S
Sbjct: 102 KNESYS-NVNDKYEHNNNTAHFVQINYKNDQSNDTLSTYKNNNEMTVEGKPNNLAS 156
Score = 47 (21.6 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 498 HGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLS 557
+GGKNN+Y + Q+ N + L L+SG ++ V + D N+ +
Sbjct: 305 NGGKNNSY---YNEKTQKGVNDKETNFLLKALDSGKFPTYCLV------ENIDENLDNFD 355
Query: 558 -WMGTTASDVIN 568
+M D +N
Sbjct: 356 IYMSKEKMDELN 367
Score = 40 (19.1 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 257 NPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDS 297
+P NA RI++ + S + ++E +AV+H +S
Sbjct: 420 HPFMNAKRIRNVVLSPFSDTIPNLSREELEKAVIHPYLKNS 460
Score = 37 (18.1 bits), Expect = 3.5e-46, Sum P(3) = 3.5e-46
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 355 IGLELDNKNHKT-KKMLEKTSSGIYMDDGD 383
IG E + K K KK EKT I++D+ D
Sbjct: 602 IG-ESEQKLRKIFKKASEKTPCIIFIDEID 630
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 541 (195.5 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 109/270 (40%), Positives = 158/270 (58%)
Query: 808 KPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFP 867
K T+ F A++ P ++R+ + W+D+GG+ +++ +KE I P ++
Sbjct: 901 KLTIKAKHFQHALNICNPSSLRE---RQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYK 957
Query: 868 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 927
+++ + +LLYGPPGCGKT + A A C FISVKGPELL + G SE VR
Sbjct: 958 HLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVR 1017
Query: 928 DIFSKATAAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
D+F KA AA+PC++FFDE DS+A +R + N +DRV+NQ LTE+DG+ +F+ AA
Sbjct: 1018 DLFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAA 1077
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
T+RPD+LD AL RPGRLD+L++ P + R I K I + PL +DVD+ +A TEGF
Sbjct: 1078 TNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGF 1137
Query: 1047 SGXXXXXXXXXXXXXXVHEILN--NIDSNE 1074
SG + E ++ NI E
Sbjct: 1138 SGADITNLCQSAVNEAIKETIHLLNIRKKE 1167
Score = 413 (150.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 90/232 (38%), Positives = 131/232 (56%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GG+ N I+E+IELP K+P IF + VL++G PG GKT I A A
Sbjct: 526 YEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANES 585
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ + GPE+++K+IG SEQ +R IF KA+ PC++F DE DSIA KR N +
Sbjct: 586 NAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEK 645
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
RVV+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P + R +IL
Sbjct: 646 RVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILL 705
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNE 1074
++K+ L DV+L IA G+ G + E ++ +D +E
Sbjct: 706 TKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDE 757
Score = 91 (37.1 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 35/157 (22%), Positives = 60/157 (38%)
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q L +A + P I+ D + V L + +MD G K+
Sbjct: 607 QKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQL----LTLMD--GLKK 660
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD +++P P R IL + ++ L+
Sbjct: 661 NNN-----VLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLD- 714
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLH 798
D L +A +C GY DL L + ++H
Sbjct: 715 PDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIH 751
Score = 88 (36.0 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 501 KNNAYEL-TLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLSW- 558
KNN E L+ +++ N E FG + G+ +E + ++ N +++
Sbjct: 475 KNNKIEFKVLKIISEESENEE-----FGCI--GEHSQLTLAEEYLKREDYEENNDDITYE 527
Query: 559 -MGTTASDVINRIKVLLS-P-DSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
+G +N+I+ L+ P F + + P +L+HG PG+GKTS+AKA+A
Sbjct: 528 DLGGMKKQ-LNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Score = 53 (23.7 bits), Expect = 3.5e-53, Sum P(3) = 3.5e-53
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 501 KNNAYELTLEARGQQNNNTEAVRQLFGKLN-SGDSVSFYTVKERGSTQGFDSNVSS 555
KN +Y + + + NNNT Q+ K + S D++S Y + +G +N++S
Sbjct: 102 KNESYS-NVNDKYEHNNNTAHFVQINYKNDQSNDTLSTYKNNNEMTVEGKPNNLAS 156
Score = 47 (21.6 bits), Expect = 1.5e-52, Sum P(3) = 1.5e-52
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 498 HGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLS 557
+GGKNN+Y + Q+ N + L L+SG ++ V + D N+ +
Sbjct: 305 NGGKNNSY---YNEKTQKGVNDKETNFLLKALDSGKFPTYCLV------ENIDENLDNFD 355
Query: 558 -WMGTTASDVIN 568
+M D +N
Sbjct: 356 IYMSKEKMDELN 367
Score = 40 (19.1 bits), Expect = 1.6e-56, Sum P(4) = 1.6e-56
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 257 NPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDS 297
+P NA RI++ + S + ++E +AV+H +S
Sbjct: 420 HPFMNAKRIRNVVLSPFSDTIPNLSREELEKAVIHPYLKNS 460
Score = 37 (18.1 bits), Expect = 3.5e-46, Sum P(3) = 3.5e-46
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 355 IGLELDNKNHKT-KKMLEKTSSGIYMDDGD 383
IG E + K K KK EKT I++D+ D
Sbjct: 602 IG-ESEQKLRKIFKKASEKTPCIIFIDEID 630
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 587 (211.7 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 150/425 (35%), Positives = 223/425 (52%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y + P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 373 FKSYGISPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 430
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q F L H PSI+ D L V +L + +MD G +
Sbjct: 431 QI---FAEATLRH-PSIIFIDELDALCPKREGAQNEVEKRVVASL----LTLMDGIGSEG 482
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
G + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 483 SE----GQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLL 538
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDF 816
++ LL +A+ GY DL+ L + A+ R L DS +K TL DF
Sbjct: 539 TEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGLVKITL--KDF 596
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
Q M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F Q ++
Sbjct: 597 LQGMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQ 653
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A
Sbjct: 654 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 713
Query: 937 APCLLFFDEFDSIAPKRGHDN-TG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
AP ++FFDE D++A +RG + G V DRV+ Q LTE+DG+E L V + AAT+RPD +D
Sbjct: 714 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRID 773
Query: 995 AALLR 999
LLR
Sbjct: 774 KELLR 778
Score = 381 (139.2 bits), Expect = 6.2e-31, Sum P(2) = 6.2e-31
Identities = 94/262 (35%), Positives = 138/262 (52%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL I+E+IELP K P +F + VLLYGPPG GKT I A A
Sbjct: 346 YDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEV 405
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR V
Sbjct: 406 GAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEK 465
Query: 963 RVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
RVV LT +DG+ E G V V AT+RP LDAAL RPGR D+ + P+ ++RLD
Sbjct: 466 RVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLD 525
Query: 1020 ILKVISRKLP-LADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILN---NI-DSNE 1074
IL+ + R++P L + +L +A+ G+ G + +L N+ DS
Sbjct: 526 ILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKV 585
Query: 1075 PGKMPVITDALLKSIASKARPS 1096
G + + L+ + + RPS
Sbjct: 586 AGLVKITLKDFLQGM-NDIRPS 606
Score = 44 (20.5 bits), Expect = 6.2e-31, Sum P(2) = 6.2e-31
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 828 MRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELP 863
+ D+T++ G G ++V GL + +E+ E P
Sbjct: 261 LSDVTQSPGNGNGLGLEEVTGLKCSFESAREVNEQP 296
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 528 (190.9 bits), Expect = 4.7e-56, Sum P(3) = 4.7e-56
Identities = 104/263 (39%), Positives = 159/263 (60%)
Query: 811 LVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIF 870
L +D A+++ P +MR++ E + W D+GG I+ +KE IE P K+P F
Sbjct: 592 LSMNDMLLALNQVKPSSMREVV---VEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSF 648
Query: 871 AQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIF 930
+ ++ +LLYGPPGC KT + A A L FI+VKGPELL+K++G SE+AVRDIF
Sbjct: 649 IRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIF 708
Query: 931 SKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRP 990
KA +P +LFFDE D +A R + +G +RVV+Q LTE+DG++ LT V + AT+RP
Sbjct: 709 KKARQNSPSILFFDEIDGLAISRSGEGSGAVERVVSQLLTEMDGIQPLTNVTIIGATNRP 768
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXX 1050
D++D A+LR GR+DR+L+ P R +I + +K+P + D+D+ ++ +T+G+SG
Sbjct: 769 DIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYSGAE 828
Query: 1051 XXXXXXXXXXXXVHEILNNIDSN 1073
+ E +N + N
Sbjct: 829 VTSICREASIAAMKEDINAKEIN 851
Score = 217 (81.4 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 44/134 (32%), Positives = 77/134 (57%)
Query: 843 WDDVGGLTDIQ-NAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
+ +GGL D+Q I+E+I+L ++ ++ +LLYGPPG GKT + A
Sbjct: 311 FQSIGGL-DLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQ 369
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ ++ G ++L+K+ G +E+ ++ IF A +P ++F DE D++ PKR +++ V
Sbjct: 370 TNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSEVE 429
Query: 962 DRVVNQFLTELDGV 975
R+V LT +DGV
Sbjct: 430 KRIVGSLLTLMDGV 443
Score = 121 (47.7 bits), Expect = 4.7e-56, Sum P(3) = 4.7e-56
Identities = 48/205 (23%), Positives = 81/205 (39%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKG-PIIRQALSNFI 648
P IL++GPPG+GKT LA+ VA +F L+K + + L
Sbjct: 346 PKGILLYGPPGTGKTLLARIVATQTNA-------TLFTINGADILDKFYGMTEKTLQKIF 398
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXV---IALTKFLVDIMDEY----GEKR 701
+A +PSI+ D L V + L +V D+ G+
Sbjct: 399 KDAAQKSPSIIFIDELDALCPKREDNSSEVEKRIVGSLLTLMDGVVSTSDQNDGGGGDNG 458
Query: 702 KSS--CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
+ CG + + + I +L GRFD +++ P R+ IL + +
Sbjct: 459 NGNGNCGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPN 518
Query: 760 ECSDEILLDVASKCDGYDAYDLEIL 784
+ + + + +ASK G+ D+E L
Sbjct: 519 QLTSQEIAMIASKTHGFVGADIESL 543
Score = 113 (44.8 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 981 VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLP-LADDVDLEAI 1039
V V T+RPD +D+AL RPGR D + P+ + R IL + K+P ++ I
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMI 528
Query: 1040 AHMTEGFSG 1048
A T GF G
Sbjct: 529 ASKTHGFVG 537
Score = 51 (23.0 bits), Expect = 4.7e-56, Sum P(3) = 4.7e-56
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 224 TSVAFINPETAENVSLCSLELVAILPRLSSKENNPENN 261
TSV +I+ +N + +++ I+P ++ NN NN
Sbjct: 19 TSVGYISIRCMQNNEITIGDIIYIVPVNNNNNNNNNNN 56
Score = 49 (22.3 bits), Expect = 7.5e-56, Sum P(3) = 7.5e-56
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 252 SSKENNPENNA--PRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSVAKGHVKIARAL 309
++KENN NN+ P N +K+I+ S C L ++ H+++
Sbjct: 61 NNKENNNNNNSEIPWNYFNCNNKDINSSGSN----CSIMTAWPL--QKLSTQHIQLDSIQ 114
Query: 310 RLYLNAGLHSWVYLKK 325
R N + +VYL K
Sbjct: 115 RENCNVKIGDYVYLFK 130
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 531 (192.0 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 122/296 (41%), Positives = 169/296 (57%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF A+ P A R+ T W D+G L DI+ + I P + P+ F
Sbjct: 554 NDFIVALSSVQPSAKREGFVTVPN---VTWADIGALEDIREELTMAILAPVRNPDQFKAL 610
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L + VLL GPPGCGKT + A A L FISVKGPELLN Y+G SE+AVR +F +A
Sbjct: 611 GLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 670
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+APC++FFDE D++ P+R TG + RVVNQ LTE+DG+E VF+ AAT+RPD++
Sbjct: 671 KNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDII 730
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIAH--MTEGFSG 1048
D A+LRPGRLD+ LF P P +RL ILK I++ K PL DV+LEAIA + ++G
Sbjct: 731 DPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTG 790
Query: 1049 XXXXXXXXXXXXXXVH-EILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKL 1103
+ E+ NE G++ V + + K R S+S+ +++
Sbjct: 791 ADLSALVREASICALRQEMARQKSGNEKGELKV-SHKHFEEAFKKVRSSISKKDQI 845
Score = 357 (130.7 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 87/252 (34%), Positives = 129/252 (51%)
Query: 843 WDDVGG--LTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
++DVGG +T ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 264 FEDVGGNDMT-LKEVCKMLIHM--RHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAG 320
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 960
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 ELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDM 380
Query: 961 TDRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 381 ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASR 440
Query: 1018 LDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGK 1077
IL+ + RKL L D +AH+T GF G V+ +L + + K
Sbjct: 441 ERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQK-K 499
Query: 1078 MPVITDALLKSI 1089
P + D K +
Sbjct: 500 NPEMEDLPSKGV 511
Score = 124 (48.7 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 59/262 (22%), Positives = 108/262 (41%)
Query: 540 VKERGSTQGFDSNVSSLSWMGTTASDV-INRI-KVLLSPDSGLWFSTYHLPL--PGHILI 595
++++ +G + +S++ + +D+ + + K+L+ + +HL + P +L+
Sbjct: 246 LQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVY--HHLGVVPPRGVLL 303
Query: 596 HGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHA 655
HGPPG GKT LA A+A L+ VA V S +S E Q L +A+ +A
Sbjct: 304 HGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQKLRELFEQAVSNA 357
Query: 656 PSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVAS 715
P I+ D + V L + D+ + R + + +
Sbjct: 358 PCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR--------VLVIGA 409
Query: 716 AQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDG 775
+ + +L +GRFD + L P + R+ IL+ ++ L + + +A G
Sbjct: 410 TNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFC-HLAHLTPG 468
Query: 776 YDAYDLEILVDRTVHAAVGRYL 797
+ DL L AV R L
Sbjct: 469 FVGADLMALCREAAMCAVNRVL 490
Score = 39 (18.8 bits), Expect = 9.5e-47, Sum P(3) = 9.5e-47
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 388 DDIIAALSS-EPSSKED 403
+D I ALSS +PS+K +
Sbjct: 554 NDFIVALSSVQPSAKRE 570
Score = 38 (18.4 bits), Expect = 9.5e-47, Sum P(3) = 9.5e-47
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 267 SNLTSKEISGGASTDKKECRQAVVHL 292
SN+ +++ G T K+ C+ ++H+
Sbjct: 260 SNVKFEDVGGNDMTLKEVCKM-LIHM 284
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 585 (211.0 bits), Expect = 7.0e-56, P = 7.0e-56
Identities = 148/413 (35%), Positives = 213/413 (51%)
Query: 643 ALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRK 702
A+ + +EA PSI+ D + V+A L+ +MD G+
Sbjct: 311 AIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDSGETESRVVAQ---LLTVMDGMGDN-- 365
Query: 703 SSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE-C 761
G I + + I +L GRFD V++ P R+ IL + + + E C
Sbjct: 366 -----GRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMNSEKC 420
Query: 762 --SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQA 819
+ E + +ASK GY DL L +V A+ R L + IK T+ DD A
Sbjct: 421 QITKEEIASIASKTHGYVGADLTALCRESVMKAINRGLTVGIP-QTAIKVTV--DDVYHA 477
Query: 820 MHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRS 879
+ E P AMR+I E + W D+GG +++ + E+++LP + + F +
Sbjct: 478 LPEIRPSAMREIF---LEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPK 534
Query: 880 NVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPC 939
VLLYGPPGC KT A A L F++VKGPE+ NKY+G SE+A+R+IF KA AA+P
Sbjct: 535 GVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPS 594
Query: 940 LLFFDEFDSIAPKR-GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALL 998
++FFDE D+IA R G +T V+ L E+DGVE L GV + AT++P +D ALL
Sbjct: 595 IIFFDEIDAIAGDRDGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALL 654
Query: 999 RPGRLDRLLFCDFPSPRERLDILKVISRKLPLA---DDVDLEAIAHMTEGFSG 1048
RPGRLDR ++ P RL IL+ SRK L + VDL+ +A +T+G SG
Sbjct: 655 RPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSGDESVDLQKLAELTDGCSG 707
Score = 357 (130.7 bits), Expect = 5.7e-29, P = 5.7e-29
Identities = 80/213 (37%), Positives = 125/213 (58%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D VGGL+ +K IELP P +F+ + +LL+GPPG GKT ++ A +
Sbjct: 228 YDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSI 287
Query: 903 S-LRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ +++ GP +++KY+G +E A+RDIF++A P ++F DE DSIAP R D++G T
Sbjct: 288 TEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDSGET 347
Query: 962 D-RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI 1020
+ RVV Q LT +DG+ + V AT+RP+ +D+AL RPGR D+ + P R +I
Sbjct: 348 ESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEI 407
Query: 1021 L-----KVISRKLPLADDVDLEAIAHMTEGFSG 1048
L K+ S K + + ++ +IA T G+ G
Sbjct: 408 LTKQFAKMNSEKCQITKE-EIASIASKTHGYVG 439
Score = 214 (80.4 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 75/254 (29%), Positives = 112/254 (44%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC-SRLSLEKGPII 640
FS + + P IL+HGPPG+GKT L + VA S+ AH++ + S +S G
Sbjct: 255 FSDFGISPPRGILLHGPPGTGKTMLLRCVANSITE-----AHVLTINGPSIVSKYLGET- 308
Query: 641 RQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEK 700
A+ + +EA PSI+ D + V+A L+ +MD G+
Sbjct: 309 ENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDSGETESRVVAQ---LLTVMDGMGDN 365
Query: 701 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE 760
G I + + I +L GRFD V++ P R+ IL + + + E
Sbjct: 366 -------GRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMNSE 418
Query: 761 -C--SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFS 817
C + E + +ASK GY DL L +V A+ R L + IK T+ DD
Sbjct: 419 KCQITKEEIASIASKTHGYVGADLTALCRESVMKAINRGLTVGIP-QTAIKVTV--DDVY 475
Query: 818 QAMHEFLPVAMRDI 831
A+ E P AMR+I
Sbjct: 476 HALPEIRPSAMREI 489
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 585 (211.0 bits), Expect = 7.0e-56, P = 7.0e-56
Identities = 147/420 (35%), Positives = 221/420 (52%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 370 FKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 427
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q F L H PSI+ D L V +L + +MD G +
Sbjct: 428 QI---FAEATLRH-PSIIFIDELDALCPKREGAQNEVEKRVVASL----LTLMDGIGSEG 479
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
G + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 480 SE----GQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLL 535
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDF 816
++ LL +A+ GY DL+ L + A+ R L DS +K TL DF
Sbjct: 536 TEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRRQPNLPDSKMAGLVKITL--KDF 593
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
Q M++ P AMR++ + + W D+GGL +++ +K+ +E P K P F Q ++
Sbjct: 594 LQGMNDIRPSAMREV---AVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQ 650
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A
Sbjct: 651 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 710
Query: 937 APCLLFFDEFDSIAPKRGHDN-TG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
AP ++FFDE D++A +RG + G V DRV+ Q LTE+DG+E L V + AAT+RPD +D
Sbjct: 711 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDRID 770
Score = 382 (139.5 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 96/275 (34%), Positives = 139/275 (50%)
Query: 829 RDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPG 888
R +K A + +D +GGL I+E+IELP K P +F + VLLYGPPG
Sbjct: 329 RTNSKDQANQLKVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPG 388
Query: 889 CGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDS 948
GKT I A A + GPE+++K+ G +E +R IF++AT P ++F DE D+
Sbjct: 389 TGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDA 448
Query: 949 IAPKRGHDNTGVTDRVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDR 1005
+ PKR V RVV LT +DG+ E G V V AT+RP LDAAL RPGR D+
Sbjct: 449 LCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDK 508
Query: 1006 LLFCDFPSPRERLDILKVISRKLP-LADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVH 1064
+ P+ ++RLDIL+ + R++P L + +L +A+ G+ G +
Sbjct: 509 EIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALR 568
Query: 1065 EILNNIDSNEPGKMPVITDALLKSIA---SKARPS 1096
+L + KM + LK + RPS
Sbjct: 569 RVLRRQPNLPDSKMAGLVKITLKDFLQGMNDIRPS 603
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 530 (191.6 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 122/308 (39%), Positives = 176/308 (57%)
Query: 814 DDFSQAMHEFLPVAMRD--ITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
+DF+ A+ P A R+ +T S W D+G L DI+ + I P + P F
Sbjct: 553 NDFTVALSSVQPSAKREGFVTVPSVT-----WADIGALEDIREELTMAILAPVRSPEQFR 607
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
L + VLL GPPGCGKT + A A L FISVKGPELLN Y+G SE+AVR +F
Sbjct: 608 ALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 932 KATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
+A ++APC++FFDE D++ P+R TG + RVVNQ LTE+DG+E VF+ AAT+RPD
Sbjct: 668 RARSSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPD 727
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIAH--MTEGF 1046
++D A+LRPGRLD+ LF P P +RL ILK I++ + PL DV+LEA+A + +
Sbjct: 728 IIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCY 787
Query: 1047 SGXXXXXXXXXXXXXXVH-EILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRL 1105
SG + E++ + G++ V + + K + S+S+ +++ +
Sbjct: 788 SGADLSALVREASICALRQEMMRPKGGGDRGELKV-SQKHFEEAFKKVKSSISKKDQV-M 845
Query: 1106 YSIYGQFL 1113
Y Q L
Sbjct: 846 YEALRQSL 853
Score = 343 (125.8 bits), Expect = 9.6e-27, Sum P(2) = 9.6e-27
Identities = 82/240 (34%), Positives = 119/240 (49%)
Query: 840 RSGWDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
R ++DVGG ++ K +I + + P ++ VLL+GPPGCGKT + A
Sbjct: 255 RVKFEDVGGNDATLKEVCKMLIHM--RHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAI 312
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A L + V E+++ G SEQ +R++F +A + APC+LF DE D+I PKR +
Sbjct: 313 AGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASK 372
Query: 959 GVTDRVVNQFLTELDGVEVLTG---VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
+ R+V Q LT +D + V V AT+RPD LD AL R GR DR + P
Sbjct: 373 DMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEA 432
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEP 1075
R IL+ + RKL L + +AH+T GF G V +L + +P
Sbjct: 433 SRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQEQQP 492
Score = 116 (45.9 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 52/209 (24%), Positives = 81/209 (38%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L+HGPPG GKT LA A+A L+ VA V S +S E Q L
Sbjct: 292 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVV--SGVSGES----EQKLRELFE 345
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
+A+ +AP ++ D + V L + MD+ ++
Sbjct: 346 QAVSNAPCVLFIDEIDAITPKREVASKDMERRIVAQL----LTCMDDLN----TTAATAR 397
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLD 768
+ + + + + +L +GRFD + L P + R+ IL+ R L +
Sbjct: 398 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLC--RKLRLPETFPFRH 455
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYL 797
+A G+ DL L AV R L
Sbjct: 456 LAHLTPGFVGADLMALCREAAMCAVSRVL 484
Score = 46 (21.3 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 201 VQDSD---EGLSHK-CNVKGVELGVALTSVAFINPETAENVSLCSL 242
VQ++D EG+ HK KG+EL V+ + A +C +
Sbjct: 229 VQEADGEIEGVLHKKAKAKGLELQVSRVKFEDVGGNDATLKEVCKM 274
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 521 (188.5 bits), Expect = 4.5e-55, Sum P(2) = 4.5e-55
Identities = 110/231 (47%), Positives = 148/231 (64%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF A+ E P A R+ T W D+G L DI++ + I P + P+ F
Sbjct: 553 NDFIVALAEVQPSAKREGFVTVPN---VTWADIGALEDIRDELIMAILAPVRNPDQFRTL 609
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L + +LL GPPGCGKT + A A L FISVKGPELLN Y+G SE+AVR +F +A
Sbjct: 610 GLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 669
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+APC++FFDE D++ P+R TG + RVVNQ LTE+DG+E VF+ AAT+RPD++
Sbjct: 670 KNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDII 729
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIAH 1041
D A+LRPGRLD+ LF P P +R+ ILK I++ K PL +DV+LE IA+
Sbjct: 730 DPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIAN 780
Score = 346 (126.9 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 84/243 (34%), Positives = 125/243 (51%)
Query: 843 WDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++DVGG ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 263 FEDVGGNDATLKEVCKMLIHM--RHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 LDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDME 380
Query: 962 DRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARE 440
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKM 1078
IL+ + RKL L + + +AH+T GF G V+ +L + + K
Sbjct: 441 RILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQK-KK 499
Query: 1079 PVI 1081
P I
Sbjct: 500 PEI 502
Score = 126 (49.4 bits), Expect = 4.5e-55, Sum P(2) = 4.5e-55
Identities = 74/304 (24%), Positives = 124/304 (40%)
Query: 511 ARGQQNNN-TEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVS--SLSWMGTTASDVI 567
A+G+ N TE ++++ G++ +++ K R ST+ SNV + T +V
Sbjct: 222 AKGKGNKRKTENLQEVDGEI---EALLQKKAKAR-STELQISNVKFEDVGGNDATLKEVC 277
Query: 568 NRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFV 627
+ + P+ ++ +P P +L+HGPPG GKT LA A+A L+ VA V
Sbjct: 278 KMLIHMRHPE--VYQHLGVVP-PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV 334
Query: 628 CCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALT 687
S +S E Q L +A+ +AP IV D + V L
Sbjct: 335 --SGVSGES----EQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLL 388
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
+ D+ + R + + + + + +L +GRFD V L P + R+
Sbjct: 389 TCMDDLNNVAATAR--------VLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARE 440
Query: 748 AILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI 807
IL+ ++ L + +A G+ DL L AV R L + +K
Sbjct: 441 RILQTLCRKLRLPETFNFC-HLAHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKK- 498
Query: 808 KPTL 811
KP +
Sbjct: 499 KPEI 502
Score = 46 (21.3 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 230 NPETAENVSLCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAV 289
N EN+ E+ A+L + +K + E SN+ +++ G +T K+ C+ +
Sbjct: 227 NKRKTENLQEVDGEIEALLQK-KAKARSTELQI----SNVKFEDVGGNDATLKEVCKM-L 280
Query: 290 VHL 292
+H+
Sbjct: 281 IHM 283
Score = 37 (18.1 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 20 LKLIETLESTRSAHLLPQVLSLEL 43
L+L ET AHL P + +L
Sbjct: 450 LRLPETFNFCHLAHLTPGFVGADL 473
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 526 (190.2 bits), Expect = 4.5e-55, Sum P(3) = 4.5e-55
Identities = 111/232 (47%), Positives = 148/232 (63%)
Query: 814 DDFSQAMHEFLPVAMRD--ITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
+DF+ A+ P A R+ +T S W D+G L DI+ + I P + P F
Sbjct: 548 NDFTVALSSVQPSAKREGFVTVPSVT-----WADIGALEDIREELTMAILAPVRSPEQFR 602
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
L + VLL GPPGCGKT + A A L FISVKGPELLN Y+G SE+AVR +F
Sbjct: 603 ALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 662
Query: 932 KATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
+A ++APC++FFDE D++ P+R TG + RVVNQ LTE+DG+E VF+ AAT+RPD
Sbjct: 663 RARSSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPD 722
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIA 1040
++D A+LRPGRLD+ LF P P +RL ILK I++ + PL DV+LEA+A
Sbjct: 723 IIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLDADVNLEALA 774
Score = 343 (125.8 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 82/240 (34%), Positives = 119/240 (49%)
Query: 840 RSGWDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
R ++DVGG ++ K +I + + P ++ VLL+GPPGCGKT + A
Sbjct: 255 RVKFEDVGGNDATLKEVCKMLIHM--RHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAI 312
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A L + V E+++ G SEQ +R++F +A + APC+LF DE D+I PKR +
Sbjct: 313 AGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASK 372
Query: 959 GVTDRVVNQFLTELDGVEVLTG---VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
+ R+V Q LT +D + V V AT+RPD LD AL R GR DR + P
Sbjct: 373 DMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEA 432
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEP 1075
R IL+ + RKL L + +AH+T GF G V +L + +P
Sbjct: 433 SRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQEQQP 492
Score = 116 (45.9 bits), Expect = 4.5e-55, Sum P(3) = 4.5e-55
Identities = 52/209 (24%), Positives = 81/209 (38%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L+HGPPG GKT LA A+A L+ VA V S +S E Q L
Sbjct: 292 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVV--SGVSGES----EQKLRELFE 345
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
+A+ +AP ++ D + V L + MD+ ++
Sbjct: 346 QAVSNAPCVLFIDEIDAITPKREVASKDMERRIVAQL----LTCMDDLN----TTAATAR 397
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLD 768
+ + + + + +L +GRFD + L P + R+ IL+ R L +
Sbjct: 398 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLC--RKLRLPETFPFRH 455
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRYL 797
+A G+ DL L AV R L
Sbjct: 456 LAHLTPGFVGADLMALCREAAMCAVSRVL 484
Score = 46 (21.3 bits), Expect = 4.5e-55, Sum P(3) = 4.5e-55
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 201 VQDSD---EGLSHK-CNVKGVELGVALTSVAFINPETAENVSLCSL 242
VQ++D EG+ HK KG+EL V+ + A +C +
Sbjct: 229 VQEADGEIEGVLHKKAKAKGLELQVSRVKFEDVGGNDATLKEVCKM 274
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 515 (186.3 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 123/317 (38%), Positives = 175/317 (55%)
Query: 793 VGRYLHSDSSFEKHIKPTLVR-DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTD 851
+G + D E+ +K + +DF A+ P A R+ T W D+G L D
Sbjct: 531 LGLLRNQDPLSEEQLKGLCIELNDFIVALSSVQPSAKREGFATVPN---VTWADIGALED 587
Query: 852 IQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKG 911
I+ + I P+ F L + VLL GPPGCGKT + A A L FISVKG
Sbjct: 588 IREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG 647
Query: 912 PELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTE 971
PELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVVNQ LTE
Sbjct: 648 PELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASVRVVNQLLTE 707
Query: 972 LDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KL 1028
+DG+E VF+ AAT+RPD++D A+LRPGRLD+ LF P P +RL ILK I++ K
Sbjct: 708 MDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKP 767
Query: 1029 PLADDVDLEAIAH--MTEGFSGXXXXXXXXXXXXXXV-HEILNNIDSNEPGKMPVITDAL 1085
PL DV+LEAIA + ++G + E+ +E G++ I+
Sbjct: 768 PLDADVNLEAIAGDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELK-ISQKH 826
Query: 1086 LKSIASKARPSVSEAEK 1102
+ K + S+S+ ++
Sbjct: 827 FEEAFKKVKSSISKEDR 843
Score = 352 (129.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 84/243 (34%), Positives = 124/243 (51%)
Query: 843 WDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++DVGG T ++ K ++ + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 263 FEDVGGNDTTLKEVCKMLVHM--RHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
L + V E+++ G SEQ +R++F +A ++APC+LF DE D+I PKR + +
Sbjct: 321 LDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKREIASKDME 380
Query: 962 DRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRE 440
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKM 1078
IL+ + RKL L + +AH+T GF G V+ +L + K
Sbjct: 441 RILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVLMELQGQHK-KN 499
Query: 1079 PVI 1081
P I
Sbjct: 500 PEI 502
Score = 129 (50.5 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 107/467 (22%), Positives = 178/467 (38%)
Query: 347 LEKDKAFGIGLELDNKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEA 406
++ +K F I K HK LE G+ ED+ S+ SS ED
Sbjct: 57 IQVEKVFSI--ISSEKEHKDLAELEDEHLAKRARHGE---EDNEYTESYSDDSSMEDYPD 111
Query: 407 VYQFENKKGLECLLHTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTY-GKV 465
Q N LL + L +V+S E + S + ++G+ K
Sbjct: 112 P-QSANHMN-SSLLSLYRKGNLDSVSSTPEMEQKESITSPPRITS------RTGSIPSKA 163
Query: 466 PA--SCNGALENKTKARELRTEIFCVLTFSEESLHGGK------NNAYELTLEARGQQNN 517
PA S G +KT R+ + F L S+E + K N+ LE+ ++
Sbjct: 164 PAEGSEGGWFIDKTPGRK-KDSFFSDL--SDEKCNDKKPISETENSKDSSLLESNKKRKG 220
Query: 518 --NTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLSW--MG---TTASDVINRI 570
N++ ++ L D +++R +G + +SS+ + +G TT +V +
Sbjct: 221 KLNSKGGKKKKEDLQEVDGEIEAVLQKRAKAKGLELQISSVKFEDVGGNDTTLKEVCKML 280
Query: 571 KVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCS 630
+ P+ ++ +P P +L+HGPPG GKT LA A+A L+ VA V S
Sbjct: 281 VHMRHPE--VYHHLGVIP-PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIV--S 335
Query: 631 RLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFL 690
+S E Q L +A+ AP I+ D + V L +
Sbjct: 336 GVSGES----EQKLRELFEQAVSSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCM 391
Query: 691 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
D+ + R + + + + + +L +GRFD + L P + R+ IL
Sbjct: 392 DDLNNVAATAR--------VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERIL 443
Query: 751 EHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL 797
+ ++ L + +A G+ DL L AV R L
Sbjct: 444 QTLCRKLRLPETFHFR-HLAHLTPGFVGADLMALCREAAMCAVNRVL 489
Score = 37 (18.1 bits), Expect = 5.1e-45, Sum P(2) = 5.1e-45
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 20 LKLIETLESTRSAHLLPQVLSLEL 43
L+L ET AHL P + +L
Sbjct: 450 LRLPETFHFRHLAHLTPGFVGADL 473
Score = 37 (18.1 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 832 TKTSAEGGRSGW 843
+K AEG GW
Sbjct: 161 SKAPAEGSEGGW 172
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 546 (197.3 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 131/350 (37%), Positives = 199/350 (56%)
Query: 699 EKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRS 758
E R + G + SA+ +++ L S D + LP P A+ RK++LE +
Sbjct: 330 ELRTAVATAGVVLIATSARP-DQLDARLRSPELCDRELGLPLPDAATRKSLLEALLN--P 386
Query: 759 LECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQ 818
+ D L ++AS+ G+ DL LV A R +D P L +DD
Sbjct: 387 VPTGDLNLDEIASRTPGFVVADLAALVREAALRAASR-ASADGR-----PPMLHQDDLLG 440
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
A+ P++ + + G DDVG + + A+ E + P + P+ FA+ +
Sbjct: 441 ALTVIRPLSRSASDEVTV--GDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPP 498
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
VLLYGPPGCGKT +V A A+ L +VKG EL++K++G+SE+AVR++F +A +AP
Sbjct: 499 RGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRARDSAP 558
Query: 939 CLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAAL 997
L+F DE D++AP+RG ++GV+DRVV LTELDG++ L V + AT+RPDL+D AL
Sbjct: 559 SLVFLDELDALAPRRGQSFDSGVSDRVVAALLTELDGIDPLRDVVMLGATNRPDLIDPAL 618
Query: 998 LRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFS 1047
LRPGRL+RL+F + P R +IL+ + +PL+ DVDL+ +A +G+S
Sbjct: 619 LRPGRLERLVFVEPPDAAARREILRTAGKSIPLSSDVDLDEVAAGLDGYS 668
Score = 155 (59.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 54/192 (28%), Positives = 81/192 (42%)
Query: 856 IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACS-LRFISVKGPEL 914
+ E ++L P++ VL+ GP G GK +V A C R +++ GPE+
Sbjct: 225 LTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLV---RAVCDGRRLVTLDGPEI 281
Query: 915 LNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDG 974
G +AV LL D D++ P + V + L+EL
Sbjct: 282 GALAAGDRVKAVASAVQAVRHEGGVLLITDA-DALLP-------AAAEPVASLILSELRT 333
Query: 975 VEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDV 1034
GV + A ++RPD LDA L P DR L P R +L+ + +P D +
Sbjct: 334 AVATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPVPTGD-L 392
Query: 1035 DLEAIAHMTEGF 1046
+L+ IA T GF
Sbjct: 393 NLDEIASRTPGF 404
Score = 51 (23.0 bits), Expect = 3.3e-54, Sum P(2) = 3.3e-54
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 593 ILIHGPPGSGKTSLAKAV 610
+L+ GP G GK +L +AV
Sbjct: 250 VLVSGPAGVGKATLVRAV 267
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 508 (183.9 bits), Expect = 3.5e-54, Sum P(2) = 3.5e-54
Identities = 107/231 (46%), Positives = 145/231 (62%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF A+ P A R+ T + W D+G L D++ + I P + P F
Sbjct: 554 NDFIVALSSVQPSAKREGFVTIPD---VTWADIGALEDVREELTMAILAPVRNPEQFKAL 610
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L + VLL GPPGCGKT + A A L FISVKGPELLN Y+G SE+AVR +F +A
Sbjct: 611 GLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 670
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+APC++FFDE D++ P+R +G + RVVNQ LTE+DG+E VF+ AAT+RPD++
Sbjct: 671 RNSAPCVIFFDEVDALCPRRSDRESGASVRVVNQLLTEMDGLENRQQVFIMAATNRPDII 730
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIAH 1041
D A+LRPGRLD+ L+ P P +RL ILK I++ + PL DV+LE IA+
Sbjct: 731 DPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDTDVNLEEIAY 781
Score = 340 (124.7 bits), Expect = 5.3e-27, P = 5.3e-27
Identities = 83/235 (35%), Positives = 119/235 (50%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++DVGG + I +M+ + + P ++ + LL+GPPGCGKT + A A
Sbjct: 259 FEDVGGNDETLKEICKML-IHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGEL 317
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
L + V E+++ G SEQ +R++F +A APC+LF DE D+I PKR + +
Sbjct: 318 ELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVASKDMER 377
Query: 963 RVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 378 RIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAAREK 437
Query: 1020 ILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNE 1074
IL+ + RKL L D +AH+T G+ G V+ +L I S E
Sbjct: 438 ILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTVNRVL--IKSEE 490
Score = 132 (51.5 bits), Expect = 3.5e-54, Sum P(2) = 3.5e-54
Identities = 56/220 (25%), Positives = 87/220 (39%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P L+HGPPG GKT LA+A+A LE VA V S +S E Q L
Sbjct: 293 PRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMV--SGVSGES----EQKLRELFD 346
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
+A+ +AP ++ D + V L L D+ +
Sbjct: 347 QAVLNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCLDDL--------NNVAATAQ 398
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L +GRFD + L P + R+ IL+ ++ L S + L +
Sbjct: 399 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAAREKILQTLCRKLKLPGSFDFL-HL 457
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYL-HSDSSFEKHIK 808
A GY DL L V R L S+ K+++
Sbjct: 458 AHLTPGYVGADLMALCREAAMCTVNRVLIKSEEQQRKYVQ 497
Score = 39 (18.8 bits), Expect = 2.1e-44, Sum P(2) = 2.1e-44
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 388 DDIIAALSS-EPSSKED 403
+D I ALSS +PS+K +
Sbjct: 554 NDFIVALSSVQPSAKRE 570
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 531 (192.0 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 122/296 (41%), Positives = 169/296 (57%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
+DF A+ P A R+ T W D+G L DI+ + I P + P+ F
Sbjct: 278 NDFIVALSSVQPSAKREGFVTVPN---VTWADIGALEDIREELTMAILAPVRNPDQFKAL 334
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L + VLL GPPGCGKT + A A L FISVKGPELLN Y+G SE+AVR +F +A
Sbjct: 335 GLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 394
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+APC++FFDE D++ P+R TG + RVVNQ LTE+DG+E VF+ AAT+RPD++
Sbjct: 395 KNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDII 454
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIAH--MTEGFSG 1048
D A+LRPGRLD+ LF P P +RL ILK I++ K PL DV+LEAIA + ++G
Sbjct: 455 DPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTG 514
Query: 1049 XXXXXXXXXXXXXXVH-EILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKL 1103
+ E+ NE G++ V + + K R S+S+ +++
Sbjct: 515 ADLSALVREASICALRQEMARQKSGNEKGELKV-SHKHFEEAFKKVRSSISKKDQI 569
Score = 278 (102.9 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 67/196 (34%), Positives = 98/196 (50%)
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
+A+ L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR
Sbjct: 41 SASRELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVA 100
Query: 957 NTGVTDRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
+ + R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P
Sbjct: 101 SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 160
Query: 1014 PRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSN 1073
R IL+ + RKL L D +AH+T GF G V+ +L +
Sbjct: 161 EASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQ 220
Query: 1074 EPGKMPVITDALLKSI 1089
+ K P + D K +
Sbjct: 221 QK-KNPEMEDLPSKGV 235
Score = 66 (28.3 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 31/156 (19%), Positives = 56/156 (35%)
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q L +A+ +AP I+ D + V L + D+ + R
Sbjct: 68 QKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR 127
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+ + + + + +L +GRFD + L P + R+ IL+ ++ L
Sbjct: 128 --------VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQ 179
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL 797
+ + +A G+ DL L AV R L
Sbjct: 180 AFDFC-HLAHLTPGFVGADLMALCREAAMCAVNRVL 214
Score = 39 (18.8 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 388 DDIIAALSS-EPSSKED 403
+D I ALSS +PS+K +
Sbjct: 278 NDFIVALSSVQPSAKRE 294
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 582 (209.9 bits), Expect = 7.2e-54, P = 7.2e-54
Identities = 147/420 (35%), Positives = 223/420 (53%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q F L H PSI+ D L V +L + +MD G +
Sbjct: 437 QI---FAEATLRH-PSIIFIDELDALCPKREGAQSEVEKRVVASL----LTLMDGIGSEG 488
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
G + + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 489 SE----GRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDF 816
+ LL +A+ GY DL+ L + A+ R L DS +K TL +DF
Sbjct: 545 TKAELLRLANNAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGMVKITL--NDF 602
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
Q M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F++ ++
Sbjct: 603 LQGMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQ 659
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR++F KA A
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAV 719
Query: 937 APCLLFFDEFDSIAPKRGHDN-TG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
AP ++FFDE D++A +RG + G V DRV+ Q LTE+DG+E L V V AAT+RPD +D
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Score = 494 (179.0 bits), Expect = 7.2e-44, P = 7.2e-44
Identities = 128/371 (34%), Positives = 193/371 (52%)
Query: 644 LSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKS 703
L +EA PSI+ D L V +L + +MD G +
Sbjct: 435 LRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEKRVVASL----LTLMDGIGSEGSE 490
Query: 704 SCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSD 763
G + + + + + +L GRFD +++ P A +R IL+ ++R +
Sbjct: 491 ----GRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTK 546
Query: 764 EILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDFSQ 818
LL +A+ GY DL+ L + A+ R L DS +K TL +DF Q
Sbjct: 547 AELLRLANNAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGMVKITL--NDFLQ 604
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F++ ++
Sbjct: 605 GMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPP 661
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR++F KA A AP
Sbjct: 662 KGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAP 721
Query: 939 CLLFFDEFDSIAPKRGHDN-TG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 996
++FFDE D++A +RG + G V DRV+ Q LTE+DG+E L V V AAT+RPD
Sbjct: 722 SIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPD----- 776
Query: 997 LLRPGRLDRLL 1007
R+D+++
Sbjct: 777 -----RIDKII 782
Score = 391 (142.7 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 127/416 (30%), Positives = 196/416 (47%)
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSS-GRFDF-HVQLPAPAASERKAILEHEIQRR 757
K +SS G + S+E ++ + D Q PA ++ K I + R
Sbjct: 204 KPQSSSGTDVHGMASEQSSMESSDVDISFQLSQLDLKEPQSPASQSTPCKPIND-----R 258
Query: 758 SLECSDEILLDVA-SKCDGYDAYDLEILVDRTVHAAVGRYLHSDS-SFEKHIKPTLVRDD 815
++ + E+LLDV S DG LE + + ++ S EK +K T
Sbjct: 259 TMNKAGEVLLDVTQSPRDG-SGLGLEEITGLKCSFDSSKEGNTQPISEEKLLKSTSAGAK 317
Query: 816 FSQAMHEFLP----VAMRDITKTSAEGG---RSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ F+ + +R I S E + +D +GGL AI+E+IELP K P
Sbjct: 318 NNTDTFYFISSTTRINLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPE 377
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
+F + +LLYGPPG GKT I A A + GPE+++K+ G +E +R
Sbjct: 378 LFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQ 437
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGV--EVLTG-VFVFA 985
IF++AT P ++F DE D++ PKR + V RVV LT +DG+ E G V V
Sbjct: 438 IFAEATLRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLG 497
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLP-LADDVDLEAIAHMTE 1044
AT+RP LDAAL RPGR D+ + P+ ++RLDIL+ + R++P L +L +A+
Sbjct: 498 ATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAH 557
Query: 1045 GFSGXXXXXXXXXXXXXXVHEILN---NI-DSNEPGKMPVITDALLKSIASKARPS 1096
G+ G + +L N+ DS G + + + L+ + + RPS
Sbjct: 558 GYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGMVKITLNDFLQGM-NDIRPS 612
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 533 (192.7 bits), Expect = 7.0e-53, Sum P(2) = 7.0e-53
Identities = 123/295 (41%), Positives = 173/295 (58%)
Query: 797 LHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSA-EGGRSGWDDVGGLTDIQNA 855
+H S + + ++DF++A+ R+ + A + WDDVGGL D++ +
Sbjct: 613 IHQASQIDNSTEKLTAKEDFTKALDRS---KKRNASALGAPKVPNVKWDDVGGLEDVKTS 669
Query: 856 IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELL 915
I + ++LP ++F+ LR RS VLLYGPPG GKT + A A CSL F+SVKGPEL+
Sbjct: 670 ILDTVQLPLLHKDLFSSG-LRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 728
Query: 916 NKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELD 973
N YIG SE+ VRDIF KA +A PC++FFDE DS+AP RG D+ GV DRVV+Q L E+D
Sbjct: 729 NMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEID 788
Query: 974 GV-EVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDF---PSPRERLDILKVISRKLP 1029
G+ + +F+ A++RPDL+D ALLRPGR D+LL+ S RER +LK ++RK
Sbjct: 789 GLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRER--VLKALTRKFK 846
Query: 1030 LADDVDLEAIAHMTEG-FSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITD 1083
L++DV L ++A F+G ++ DS G MP D
Sbjct: 847 LSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDS---GDMPTEED 898
Score = 96 (38.9 bits), Expect = 7.0e-53, Sum P(2) = 7.0e-53
Identities = 63/260 (24%), Positives = 107/260 (41%)
Query: 565 DVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHI 624
+ +N + +LSP L S L +L+HG PG GK ++ K VA+ L H +
Sbjct: 354 ETVNILASVLSPP--LCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHV-----V 406
Query: 625 VFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIV------IFDNLXXXXXXXXXXXXXX 678
F C S L+ + AL+ + A ++P+I+ +F NL
Sbjct: 407 EFSCHSLLASSERKT-STALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVS 465
Query: 679 XX-XXVIA-LTKFLVD---IMDEYGEKRKSSCGIGP-----IAFVASAQSLEKIPQSLTS 728
VI LT+ + + M+E S +G + +ASA+S E I ++
Sbjct: 466 FEIASVIRELTEPVSNGDSSMEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRR 525
Query: 729 SGRFDFHVQLPAPAASERKAILEHEIQRRS--LECS-DEILLDVASKCDGYDAYDLEILV 785
F +++ + +R +L +Q S L S DE + + + G+ DL+ LV
Sbjct: 526 C--FSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALV 583
Query: 786 DRTVHAAVGRYLHSDSSFEK 805
A Y+ +S +K
Sbjct: 584 ---ADAGANLYISQESETKK 600
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 553 (199.7 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 141/415 (33%), Positives = 223/415 (53%)
Query: 714 ASAQSLEKIPQSLTSSGRFDFHV---QLPAPAASERKAILEHE----IQRRSLECSDEIL 766
A + L + + L SG FDF Q P ++ KA+ I+R E S
Sbjct: 350 AREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNK 409
Query: 767 LDVASKCDGYDAYDLEILVDRTV-----HAAV-GRYL--HSDSSFEKHIKPTLV-RDDFS 817
LD+ S ++ D ++ +D H+++ RYL H D + ++P + DF
Sbjct: 410 LDLNSD-PRFNELDSDMALDSNDSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFI 468
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+A+ + P + R+ T G S W+++G L I+ ++ I P K P ++ +
Sbjct: 469 EALAKVQPSSKREGFATVP--GVS-WNNIGALKSIRVELQMAIVQPIKRPELYQSVGISA 525
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
+ VLL+GPPGCGKT + A A FIS++GPELLNKY+G SE+AVR +F +A A++
Sbjct: 526 PTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASS 585
Query: 938 PCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAAL 997
PC++FFDE D++ P+R + + RVVN LTELDG+ +GV+V AAT+RPD++D A+
Sbjct: 586 PCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAM 645
Query: 998 LRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH--MTEGFSGXXXXXXX 1055
LRPGRLD+ L D P ER++ILK ++++ PL ++V+L+ + FSG
Sbjct: 646 LRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALV 705
Query: 1056 XXXXXXXVHE-ILNNIDSNEP------GKMPV-ITDALLKSIASKARPSVSEAEK 1102
+ + +I SNEP P+ +T+A + +PSVS+ ++
Sbjct: 706 REAAVTALRSAVFADIASNEPEITQHSALEPIRVTNADFELAFKNIKPSVSDRDR 760
Score = 403 (146.9 bits), Expect = 5.6e-34, P = 5.6e-34
Identities = 93/275 (33%), Positives = 143/275 (52%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
D+GGL D N + E++ +P K P ++ + VLL+GPPGCGKT + A A +
Sbjct: 175 DIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGV 234
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV 964
FIS+ P +++ G SE+ VR++F +A + APCL+F DE D++ PKR + R+
Sbjct: 235 PFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRI 294
Query: 965 VNQFLTELDGV--EVLTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI 1020
V QFLT +D + E G V V AT+RPD LD+AL R GR DR + PS R I
Sbjct: 295 VAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKI 354
Query: 1021 LKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPV 1080
L+ +++ L L+ D D +A T G+ G + I N I + K+ +
Sbjct: 355 LRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEI--SPLNKLDL 412
Query: 1081 ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDS 1115
+D + S +++ L SI ++L++
Sbjct: 413 NSDPRFNELDSDMALDSNDSLPLDHSSIIQRYLNA 447
Score = 135 (52.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 57/259 (22%), Positives = 102/259 (39%)
Query: 550 DSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKA 609
D ++S + + ++++ + + + ++ H P P +L+HGPPG GKT LA A
Sbjct: 170 DISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIH-P-PRGVLLHGPPGCGKTMLANA 227
Query: 610 VAKSLEHHKDLVAHIVFVCCSRLSLEKGPI--IRQALSNFISEALDHAPSIVIFDNLXXX 667
+A L + F+ S S+ G + + EA AP ++ D +
Sbjct: 228 LANELG--------VPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAV 279
Query: 668 XXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLT 727
V +FL MDE ++ P+ + + + + +L
Sbjct: 280 TPKRESAQREMERRIV---AQFLT-CMDELSFEKTDG---KPVLVIGATNRPDSLDSALR 332
Query: 728 SSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVD 786
+GRFD + L P+ R+ IL + L+ S + +A + GY DL+ L
Sbjct: 333 RAGRFDREICLTVPSQDAREKILR--TMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTA 390
Query: 787 RTVHAAVGRYLHSDSSFEK 805
A+ R + S K
Sbjct: 391 AAGIIAIKRIFNEISPLNK 409
Score = 37 (18.1 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 161 VPGTEVAVAPKRRKNNVKKHEDSYMQAFNESTSIAKALLRVQDSD 205
VP ++ AP + E + F E+ S+A L+ + + D
Sbjct: 234 VPFISIS-APSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEID 277
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 514 (186.0 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 107/205 (52%), Positives = 140/205 (68%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
WDDVGGL ++++A+ E I+LP + P +FA+ ++ RS +L YGPPG GKT + A A
Sbjct: 995 WDDVGGLGNVKDAVMETIQLPLERPELFAKG-MKKRSGILFYGPPGTGKTLLAKAIATEY 1053
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGV 960
SL F SVKGPELLN YIG SE VR +F +A A PC++FFDE DS+APKRG+ D+ GV
Sbjct: 1054 SLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGV 1113
Query: 961 TDRVVNQFLTELDGV----EVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 1016
DR+V+Q L ELDG+ + GVFV AT+RPDLLD ALLRPGR D+LL+ E
Sbjct: 1114 MDRIVSQLLAELDGMSSGDDSGGGVFVIGATNRPDLLDQALLRPGRFDKLLYLGVSDTHE 1173
Query: 1017 R-LDILKVISRKLPLADDVDLEAIA 1040
+ L I++ ++RK L V L A+A
Sbjct: 1174 KQLTIMEALTRKFTLHPSVSLRAVA 1198
Score = 79 (32.9 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 39/148 (26%), Positives = 62/148 (41%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VAS 771
+A+ +KIP + G F +++ AP ER+ IL + +R + + L VA
Sbjct: 849 IATTTEPDKIPDGVR--GLFTHELEMTAPDEGEREGILRSIVDQRGINLDPGVDLGGVAL 906
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRY--LHSDSSFEKH-IKPTLVRDDFSQAMHEFLPVAM 828
K A DL ++DR + A R L +S + +P + D A A+
Sbjct: 907 KTAALVAGDLVDVIDRAIVAQRSRLESLAEKASQSRQGNQPAVTLRDVQVAGG----TAV 962
Query: 829 RDITK----TSAEGGRSGWDDVGGLTDI 852
R +TK T+ E R + D G I
Sbjct: 963 RGLTKGDLDTAVEAARKNFADAIGAPKI 990
Score = 72 (30.4 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 585 YHLPLPGHILIHGPPGSGKTSLAKAVAKSL 614
+ LPLP H + H PP GK +L + VA+ +
Sbjct: 202 FPLPLPPHPITHVPPNPGKVTLCEPVAQGI 231
Score = 50 (22.7 bits), Expect = 3.9e-48, Sum P(4) = 3.9e-48
Identities = 22/62 (35%), Positives = 28/62 (45%)
Query: 117 AEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPK----KPVVQ--LVPGTEVAVAP 170
A A L +R+VH FPL L I HV K +PV Q L P T++ V+
Sbjct: 185 AVRAALGTLRVVHSGDLFPLPLPPHPIT--HVPPNPGKVTLCEPVAQGILSPNTKIIVSS 242
Query: 171 KR 172
R
Sbjct: 243 GR 244
Score = 43 (20.2 bits), Expect = 3.9e-48, Sum P(4) = 3.9e-48
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 394 LSSEPSSKEDEEA-VY-QFENKKGLECLLHTWLLAQLTA 430
L +PS+++D+EA +Y + + C W+ + +A
Sbjct: 396 LHPKPSAEDDDEAHIYVDVSHLSRIGCFSGDWVRVEASA 434
Score = 37 (18.1 bits), Expect = 6.6e-47, Sum P(3) = 6.6e-47
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 15 FVSLPLKLIETLESTRSAHLLPQVLS 40
F +L ++ IE L + R A L +LS
Sbjct: 818 FCALLIRHIEALTADRMATSLRSILS 843
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 555 (200.4 bits), Expect = 3.3e-50, P = 3.3e-50
Identities = 134/349 (38%), Positives = 200/349 (57%)
Query: 712 FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILE-----HEIQR---RSLECS- 762
FV S +++ +P S S RF+ + +P P+ ++R I + HE+ R + + S
Sbjct: 592 FVGSVNNIDNVPSSFRSHMRFE--ILVPVPSEAQRLRIFQWYLSSHELNRDVQQKVPVSY 649
Query: 763 -DEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV-RDDFSQA 819
D I ++S G D++ +V+ A R+ + L+ ++D S+A
Sbjct: 650 MDNISFSSLSSYSAGLTPLDIKSIVETARMTATARFYQESKKCGWLPQSILITQEDLSKA 709
Query: 820 MHEFLPVAMRDITKT--SAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+ A + + + + + WDD+GG+ ++ I + I++P K P +F ++
Sbjct: 710 TSK----ARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTSG-MKK 764
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F KA A
Sbjct: 765 RSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAK 824
Query: 938 PCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEV-LTGVFVFAATSRPDLLD 994
PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ GVFV AT+RPDLLD
Sbjct: 825 PCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLD 884
Query: 995 AALLRPGRLDRLLFCDFP-SPRERLDILKVISRKLPLADDVDLEAIAHM 1042
ALLRPGR D+LL+ P + ++L+IL+ ++RK L +DV L +A +
Sbjct: 885 EALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKL 933
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 501 (181.4 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 99/235 (42%), Positives = 150/235 (63%)
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
A+ P AMR++ E W D+GG ++++ A+++ IE P + F + ++
Sbjct: 513 ALTRIKPSAMREVL---IECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPP 569
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
+L++GPPGC KT I A A L F+S+KGPEL + ++G SE+AVR++F KA AP
Sbjct: 570 RGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAP 629
Query: 939 CLLFFDEFDSIAPKRGHDN-----TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
++FFDE D+I +R + + V +RV+ Q LTELDGVE L V + AAT+RPD++
Sbjct: 630 AIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMI 689
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
D ALLRPGR+DR+L+ P R +ILK+ R +P+++DVD+E + +TEG+SG
Sbjct: 690 DKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSG 744
Score = 218 (81.8 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 79/281 (28%), Positives = 134/281 (47%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL ++E +E F + A LR+ +LLYG GCGK+ ++ A A R
Sbjct: 274 IGGLDRQLQLVEESMEYALGFRTL--PAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEER 331
Query: 906 ------FISVKGPELLNKYIGASEQAVRDIFSKATA--AAPCLLFFDEFDSIAPKRGHDN 957
I + E+ +K++G +EQ + IF +A P LL ++ ++ PK+ +N
Sbjct: 332 SQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQ--EN 389
Query: 958 TGVTDRVVNQFLTELDGVEV---LTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFP 1012
+ + RV FL+ LD + L G FV A +S+ D L ++ R GRLD + P
Sbjct: 390 SDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAP 449
Query: 1013 SPRERLDILKVISRKLP--LADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNI 1070
S + RL+I++ + + + L+D+ ++E +A +T G+ G V+ +
Sbjct: 450 SSQARLEIVRCLIKSVEHQLSDE-EVEHVASITHGYVGADLANL--------VYAAMLQA 500
Query: 1071 DSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQ 1111
N P +MP + AL + S R + E ++ I GQ
Sbjct: 501 QPN-PLQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQ 540
Score = 96 (38.9 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 51/226 (22%), Positives = 92/226 (40%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L++G G GK+ + +A+ E ++ + + + Q L A
Sbjct: 307 LLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAY 366
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
+H P + L ++L FL ++D+ + G F
Sbjct: 367 NHYPHPTLL--LIEDVHNLCPKQENSDLVKRVSLA-FL-SLLDQLSSPSQLK---GSKTF 419
Query: 713 V-ASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVAS 771
V A++ ++ + S+ +GR D V+L AP++ R I+ I+ + SDE + VAS
Sbjct: 420 VLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVAS 479
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYL---HSDSSFEKHIKPTLVRD 814
GY DL LV + A L H ++ + IKP+ +R+
Sbjct: 480 ITHGYVGADLANLVYAAMLQAQPNPLQMPHLQAALTR-IKPSAMRE 524
Score = 42 (19.8 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 806 HIKPTLVRDDFSQAMHEFL--PVAMRDITKTS-AEGGRSGWDDVGGLTDIQNAIKEMIEL 862
HI P+ RD+ HE L ++ D+ S AE RSG L ++ + +L
Sbjct: 23 HI-PSKARDN-----HEGLCFAISQDDVGPDSEAEYVRSGAIYTRSLQQRNFEVESLKDL 76
Query: 863 PSKFPNI 869
P+K+ N+
Sbjct: 77 PTKYANM 83
Score = 39 (18.8 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 8/41 (19%), Positives = 18/41 (43%)
Query: 589 LPGHILIHGPPGSGKTSLAKAVAKSLEHH--KDLVAHIVFV 627
L + + P + + + + KS+EH + V H+ +
Sbjct: 440 LDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASI 480
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 533 (192.7 bits), Expect = 1.7e-49, P = 1.7e-49
Identities = 107/236 (45%), Positives = 154/236 (65%)
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
DDF A+ + P + R+ T + + W D+G L+ I++ + I P K P ++A
Sbjct: 442 DDFFTALPKIQPSSKREGFATIPD---TTWADIGALSGIRDELATAIVDPIKHPELYASV 498
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
+ + VLL+GPPGCGKT + A A FISVKGPELLNKY+G SE+AVR +F +A
Sbjct: 499 GITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVRA 558
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGV-EVLTGVFVFAATSRPDL 992
++ PC++FFDE D++ P+R + + RVVN LTELDG+ G++V AAT+RPD+
Sbjct: 559 RSSIPCVIFFDELDALVPRRDDTLSEASARVVNTLLTELDGLGSSRQGIYVIAATNRPDI 618
Query: 993 LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+D A+LRPGRL+ LLF + PSP ER++IL+ + R+LP+ + DL +A EGFSG
Sbjct: 619 IDPAMLRPGRLETLLFVNLPSPLERVEILQTLVRRLPIEFNEDLRRLAEECEGFSG 674
Score = 427 (155.4 bits), Expect = 9.8e-37, P = 9.8e-37
Identities = 147/518 (28%), Positives = 226/518 (43%)
Query: 495 ESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVS 554
+SL G N A + ++ N T A + + G+S S K +
Sbjct: 104 KSLVGAWNTASKAP-KSESNAENGTPAPTTTKKRHHGGESHSSKRRKAENAVDRSPPTHV 162
Query: 555 SLSWMGTTASDVINRIK--VLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAK 612
SL+ +G DV+ ++ V+L + ++ P +L+HGPPG GKT +A A A
Sbjct: 163 SLADLGGL-DDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAA 221
Query: 613 SLEHHKDLVAHIVFVCCSRLSLEKGPI--IRQALSNFISEALDHAPSIVIFDNLXXXXXX 670
L + F+ S S+ G +AL EA AP ++ D +
Sbjct: 222 ELG--------VPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPK 273
Query: 671 XXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSG 730
V L + D+ E + + P+ +A+ + + +L G
Sbjct: 274 RENSQREMEKRIVAQLLTCMDDLALEKTDGK-------PVIVLAATNRPDSLDAALRRGG 326
Query: 731 RFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVH 790
RFD + + P+ R+ IL + R+ D +A + G+ DL LV
Sbjct: 327 RFDKEINMTVPSEPVREQILR-ALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGS 385
Query: 791 AAVGRYLH---SDSSFEKHIKPTLVRDDFSQAMHEF---------LPVAMR--------D 830
A+ RYL S+S E I+ +DD S ++ E P+ D
Sbjct: 386 TAIKRYLDLLKSNSGEEMDIEG---QDDLSPSVKELRRLITHAKETPIGSEAEVVLVSND 442
Query: 831 -----ITKTSAEGGRSG--------WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+ K R G W D+G L+ I++ + I P K P ++A +
Sbjct: 443 DFFTALPKIQPSSKREGFATIPDTTWADIGALSGIRDELATAIVDPIKHPELYASVGITA 502
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
+ VLL+GPPGCGKT + A A FISVKGPELLNKY+G SE+AVR +F +A ++
Sbjct: 503 PTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVRARSSI 562
Query: 938 PCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGV 975
PC++FFDE D++ P+R + + RVVN LTELDG+
Sbjct: 563 PCVIFFDELDALVPRRDDTLSEASARVVNTLLTELDGL 600
Score = 417 (151.9 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 94/262 (35%), Positives = 142/262 (54%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
D+GGL D+ + +++ LP P ++ + ++ VLL+GPPGCGKT I A AA +
Sbjct: 166 DLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAAELGV 225
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV 964
FIS+ P +++ G SE+A+R+ F +A APCL+F DE D+I PKR + + R+
Sbjct: 226 PFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKRENSQREMEKRI 285
Query: 965 VNQFLTELD--GVEVLTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI 1020
V Q LT +D +E G V V AAT+RPD LDAAL R GR D+ + PS R I
Sbjct: 286 VAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSEPVREQI 345
Query: 1021 LKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPV 1080
L+ ++RK+ L DD+D + +A T GF G + L+ + SN +M +
Sbjct: 346 LRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLDLLKSNSGEEMDI 405
Query: 1081 ITDALLKSIASKARPSVSEAEK 1102
L + R ++ A++
Sbjct: 406 EGQDDLSPSVKELRRLITHAKE 427
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 523 (189.2 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 143/422 (33%), Positives = 213/422 (50%)
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ V S S ++P + ++ F V + + + +R+ +L + L D L +
Sbjct: 658 VVVVGSVSSQHELPSDVMAA--FVHQVAIESLSEDQRRMVLS-SLSEDLLLGKDVNLGRI 714
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHS---DSSFEKHIKPTLVR------DDFSQAM 820
A + G+ DL L+ AA R + + ++ E+ + V +DFS A+
Sbjct: 715 AKQTAGFVLGDLCALLTNAGKAAHRRLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAAL 774
Query: 821 HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 880
+ I W DVGGL ++ I + I+LP + P + + LR RS
Sbjct: 775 DVLQEAHSQAIGAPKIPA--VSWQDVGGLQQVKKEILDTIQLPLEHPELLSLG-LR-RSG 830
Query: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 940
+LLYGPPG GKT + A A C++ F+SVKGPEL+N Y+G SE+ +R + SKA +AAPC+
Sbjct: 831 LLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIRQVSSKARSAAPCI 890
Query: 941 LFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALL 998
+FFDE DS+AP RGH D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD +LL
Sbjct: 891 IFFDELDSLAPNRGHSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQSLL 950
Query: 999 RPGRLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDLEAIAHMTEG-FSGXXXXXXXX 1056
RPGR D+L++ RE +L +LK I RK + V L I +G
Sbjct: 951 RPGRFDKLVYVGINEDRESQLQVLKAILRKFKVDASVCLSDIVESCPPRLTGADLYSLCS 1010
Query: 1057 XXXXXXVHEILNNIDSNEPGKMPVIT--DALLKSIASKARPSVSEAEKLRLYSIYGQFLD 1114
V ++ I ++ +T S +PSVSE +++ Y + Q L
Sbjct: 1011 DAMMCAVKRKISRITEGVDSELSSLTLCSEDFSEALSGLQPSVSE-QQISRYQLLQQKLS 1069
Query: 1115 SK 1116
S+
Sbjct: 1070 SR 1071
Score = 78 (32.5 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 554 SSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKS 613
+SLS G S + ++ ++ P L ST L IL+ GP GSGK + +AV++
Sbjct: 527 TSLSPPGL--SSTVEKLITIIQPH--LNESTLILKRGCSILLMGPNGSGKFTAVRAVSRR 582
Query: 614 LEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNL 664
L H H++ V C L + + + A H P +++ NL
Sbjct: 583 L-H-----LHLIKVDCVTLCADTAAASEAKIKSVFERAELHHPCLLLLRNL 627
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 563 (203.2 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
Identities = 142/351 (40%), Positives = 199/351 (56%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-VAS 771
+A+ +E+IP+++ S +F +L AP ER+ IL + + RS++ + ++ L VA
Sbjct: 880 IATTTDVEQIPEAIRSMFTHEF--ELTAPEEKEREGILRNAVSERSIKLAPDVDLGTVAL 937
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRY--LHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMR 829
K A DL +V+R A R L +S + VRD V
Sbjct: 938 KTAALVAGDLVDVVERASVARSTRLEKLAESASKQSPTSKITVRDVLLAGGEAVRGVTKA 997
Query: 830 DIT-------KTSAEG-GRS-----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
D K A+ G W+DVGGLT++++A+ E I+LP + P +FA+ ++
Sbjct: 998 DFDAAVDAARKNFADSIGAPKIPNVSWEDVGGLTNVKDALVETIQLPLERPELFAKG-MK 1056
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F +A A
Sbjct: 1057 KRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDA 1116
Query: 937 APCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV----EVLTGVFVFAATSRP 990
PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ E GVFV AT+RP
Sbjct: 1117 RPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRP 1176
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRER-LDILKVISRKLPLADDVDLEAIA 1040
DLLD ALLRPGR D++L+ E+ IL+ ++RK LA D+ L ++
Sbjct: 1177 DLLDTALLRPGRFDKMLYLGVSDTHEKQATILEALTRKFALAPDLSLARVS 1227
Score = 42 (19.8 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSL 614
LPLP H + + P S + V++ L
Sbjct: 241 LPLPPHPITYAPAPPALISFCEPVSQGL 268
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 546 (197.3 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 133/373 (35%), Positives = 198/373 (53%)
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILL 767
G + + S+EKIP + S F+ ++ ER +L+ I ++ I L
Sbjct: 524 GRYIVIGTCHSIEKIPYEILSESFFE--LKFSELEMDERLELLK--IYANNVIIDKRISL 579
Query: 768 -DVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIK--PTLVRDDFSQAMHEFL 824
DVA K + +LE L D AAV R + + I P + D +++
Sbjct: 580 KDVALKTNSMSFGELECLPDHMTKAAVDRIKRTGYDNDSIILSGPIITEQDVDVSINRI- 638
Query: 825 PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLY 884
++ + T + WDD+GGL + + +++ ++LP +FP +F+Q L+ RS VLLY
Sbjct: 639 ---RKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQG-LKPRSGVLLY 694
Query: 885 GPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFD 944
GPPG GKT + A A SL F+S+KGPELLN Y+G SE VR++F KA ++PC++FFD
Sbjct: 695 GPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFD 754
Query: 945 EFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTG--VFVFAATSRPDLLDAALLRP 1000
E DSIAP RG+ D+ V DRVV+Q L ELD + VFV AT+RPDLLD +LLRP
Sbjct: 755 ELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRP 814
Query: 1001 GRLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDLEAIA-HMTEGFSGXXXXXXXXXX 1058
GR D+L++ E + +L+ +++ L + +DL IA + F+G
Sbjct: 815 GRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDA 874
Query: 1059 XXXXVHEILNNID 1071
+ N ID
Sbjct: 875 VLSAIKRKTNEID 887
Score = 46 (21.3 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 594 LIHGPPGSGKTSLAKAVA 611
L+HG P +GKT + VA
Sbjct: 426 LLHGNPFTGKTKAVEEVA 443
Score = 46 (21.3 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 1065 EILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
E ++ + ++ + + L S+ K RPS+SE E R + QF
Sbjct: 901 EFFKRNENQDSLELRITKEDFLTSL-KKLRPSISEQELHRYEMVRHQF 947
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 521 (188.5 bits), Expect = 5.4e-49, P = 5.4e-49
Identities = 129/354 (36%), Positives = 190/354 (53%)
Query: 699 EKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRS 758
+ K S + VAS ++ I +L +GRFD V++ P +R IL+ ++ +
Sbjct: 154 DSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVN 213
Query: 759 LECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQ 818
L+ S + L +A C+GY DLE L +A R SDS L DF
Sbjct: 214 LDPSVD-LQAIAISCNGYVGADLEALCREATISASKR--SSDSLI-------LTSQDFKI 263
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
A P R IT E + WDDVGGL D++ +++ +E P K F + +
Sbjct: 264 AKSVVGPSINRGIT---VEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPM 320
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
+LL+GPPGC KT + AAA A F S+ EL + Y+G E +R+ F +A A+P
Sbjct: 321 RGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASP 380
Query: 939 CLLFFDEFDSIAPKRGHDNTG----VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
++FFDE D +A KRG +++ V +R+++ LTE+DG+E G+ V AAT+RP +D
Sbjct: 381 SIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAID 440
Query: 995 AALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
AAL+RPGR D +L+ P R +IL+V +R + L DDVDL IA T+ F+G
Sbjct: 441 AALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTG 494
Score = 283 (104.7 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 73/213 (34%), Positives = 116/213 (54%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
++GG A++E+I P ++P L+ +LLYGPPG GKT +V A C
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82
Query: 905 RFISVKGPELLNK-YIGASEQAVRDIFSKATAAA----PCLLFFDEFDSIAPKRGHDNTG 959
I V P +++ + G SE+ +R+ F++A++ A P ++F DE D + P+R D
Sbjct: 83 HLI-VLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR--DARR 139
Query: 960 VTD-RVVNQFLTELDGVEVLTG---VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
D R+ +Q T +D + + V V A+T+R D +D AL R GR D L+ P+
Sbjct: 140 EQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEE 199
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+RL IL++ ++K+ L VDL+AIA G+ G
Sbjct: 200 DRLKILQLYTKKVNLDPSVDLQAIAISCNGYVG 232
Score = 182 (69.1 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 60/211 (28%), Positives = 101/211 (47%)
Query: 584 TYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVA-HIVFVCCSRLSLEKGPIIRQ 642
T L P +L++GPPG+GKTSL +AV + + H +++ H V + S EK ++R+
Sbjct: 50 TLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGES-EK--VLRE 106
Query: 643 ALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRK 702
A + S A+ PS++ D + + + L +MD K
Sbjct: 107 AFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQD-----VRIASQLFTLMDS----NK 157
Query: 703 SSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECS 762
S + VAS ++ I +L +GRFD V++ P +R IL+ ++ +L+ S
Sbjct: 158 PSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPS 217
Query: 763 DEILLDVASKCDGYDAYDLEILV-DRTVHAA 792
+ L +A C+GY DLE L + T+ A+
Sbjct: 218 VD-LQAIAISCNGYVGADLEALCREATISAS 247
Score = 139 (54.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 65/255 (25%), Positives = 104/255 (40%)
Query: 588 PLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL-SLEKGPIIRQALSN 646
P+ G IL+HGPPG KT+LAKA A + + A + C+ L S+ G L N
Sbjct: 319 PMRG-ILLHGPPGCSKTTLAKAAANAAQ------ASFFSLSCAELFSMYVGEG-EALLRN 370
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
A +PSI+ FD L L+ MD E + G
Sbjct: 371 TFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAK----G 426
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI- 765
I +A+ I +L GRFD + +P P R IL+ + R++ D++
Sbjct: 427 I---LVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQ--VHTRNMTLGDDVD 481
Query: 766 LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH-------IKPTLVRDDFSQ 818
L +A + D + +LE L + ++ + + + F +H +KP L ++ +
Sbjct: 482 LRKIAEETDLFTGAELEGLCRESGTVSLRENIAATAVFNRHFQTAKSSLKPALTIEEV-E 540
Query: 819 AMHEFLPVAMRDITK 833
F A R +K
Sbjct: 541 TYSSFRKAAKRSDSK 555
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 526 (190.2 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 131/372 (35%), Positives = 204/372 (54%)
Query: 752 HEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL--HSDSSFEKHIKP 809
H ++ S++ +D + LD A+K D ++ + ++ + + ++L H D ++ + P
Sbjct: 434 HSVKDDSMD-ADPVSLD-ANKEDMIKKFEQKSEAEKL--STIKKFLNMHPDPLNQEQLAP 489
Query: 810 TLVR-DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ DF A+ P A R+ T + W +VG L I+ + I P K P
Sbjct: 490 LAITYQDFVNALPSVQPSAKREGFATIPD---VTWQNVGALFKIRMELHMCIVQPIKKPE 546
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
++ + + + VL++GPPGCGKT + A A FIS+KGPELLNKY+G SE+AVR
Sbjct: 547 LYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQ 606
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATS 988
+F +A A+ PC++FFDE D++ P+R + + RVVN LTELDG+ GVFV AT+
Sbjct: 607 VFQRARASTPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATN 666
Query: 989 RPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR--KLPLADDVDLEAIAHMTE-- 1044
RPD++D A+LRPGRLD+ L+ + P+P ERL+ILK + R PL +VDL AI+ +
Sbjct: 667 RPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCG 726
Query: 1045 GFSGXXXXXXXXXXXXXXV------HEILNNIDSN---EP--GKMPV-ITDALLKSIASK 1092
FSG + ++ + +DS+ E G+ + IT S
Sbjct: 727 NFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDFDHALSS 786
Query: 1093 ARPSVSEAEKLR 1104
RPSVS+ +++R
Sbjct: 787 IRPSVSDRDRMR 798
Score = 361 (132.1 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 82/247 (33%), Positives = 129/247 (52%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GG+ + + E+I LP P I++ + VLLYGPPGCGKT I A A +
Sbjct: 195 LGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVP 254
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR-GHDNTGVTDRV 964
FI++ P +++ G SE+ +R+IF +A APCL+F DE D+I PKR G + R+
Sbjct: 255 FINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQREMEKRI 314
Query: 965 VNQFLTELDGVEV-LTG---VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI 1020
V Q LT +D + + TG V V AT+RPD LD+AL R GR DR + + P+ +R+ I
Sbjct: 315 VAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISI 374
Query: 1021 LKVISRKLPL--ADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKM 1078
LK +++ + L + + ++ +T G+ G + I + +
Sbjct: 375 LKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEESH 434
Query: 1079 PVITDAL 1085
V D++
Sbjct: 435 SVKDDSM 441
Score = 166 (63.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 79/327 (24%), Positives = 135/327 (41%)
Query: 513 GQQNNNTEAVRQLFGKLNSGDSVSFYTVKER--GSTQGFDSNVSSLSWMGTTASDVINRI 570
GQQ + TE ++ K K + ST D +SSL + + + ++ I
Sbjct: 152 GQQADTTELLKGNKRKAKGSAKTQLKKQKRKIDYSTPNID--LSSLGGVESVTTQLLEII 209
Query: 571 KV-LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC 629
+ +L P+ ++ ST P P +L++GPPG GKT++A A+A L+ + F+
Sbjct: 210 GLPILHPE--IYSSTGVEP-PRGVLLYGPPGCGKTTIANALAGELK--------VPFINI 258
Query: 630 SRLSLEKGPI--IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALT 687
S S+ G + L EA AP ++ D + ++A
Sbjct: 259 SAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQREMEKRIVAQ- 317
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
L+ +MDE ++ G P+ + + + + +L +GRFD + L P +R
Sbjct: 318 --LLTLMDELTLEKT---GGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRI 372
Query: 748 AILEHEIQRRSLECSDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
+IL+ + LE + SK GY DL+ LV +A+ R + S ++
Sbjct: 373 SILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEE 432
Query: 807 IKPTLVRDDFSQAMHEFLPVAMRDITK 833
V+DD A L D+ K
Sbjct: 433 SHS--VKDDSMDADPVSLDANKEDMIK 457
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 526 (190.2 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 131/372 (35%), Positives = 204/372 (54%)
Query: 752 HEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL--HSDSSFEKHIKP 809
H ++ S++ +D + LD A+K D ++ + ++ + + ++L H D ++ + P
Sbjct: 434 HSVKDDSMD-ADPVSLD-ANKEDMIKKFEQKSEAEKL--STIKKFLNMHPDPLNQEQLAP 489
Query: 810 TLVR-DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ DF A+ P A R+ T + W +VG L I+ + I P K P
Sbjct: 490 LAITYQDFVNALPSVQPSAKREGFATIPD---VTWQNVGALFKIRMELHMCIVQPIKKPE 546
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
++ + + + VL++GPPGCGKT + A A FIS+KGPELLNKY+G SE+AVR
Sbjct: 547 LYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQ 606
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATS 988
+F +A A+ PC++FFDE D++ P+R + + RVVN LTELDG+ GVFV AT+
Sbjct: 607 VFQRARASTPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATN 666
Query: 989 RPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR--KLPLADDVDLEAIAHMTE-- 1044
RPD++D A+LRPGRLD+ L+ + P+P ERL+ILK + R PL +VDL AI+ +
Sbjct: 667 RPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCG 726
Query: 1045 GFSGXXXXXXXXXXXXXXV------HEILNNIDSN---EP--GKMPV-ITDALLKSIASK 1092
FSG + ++ + +DS+ E G+ + IT S
Sbjct: 727 NFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDFDHALSS 786
Query: 1093 ARPSVSEAEKLR 1104
RPSVS+ +++R
Sbjct: 787 IRPSVSDRDRMR 798
Score = 361 (132.1 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 82/247 (33%), Positives = 129/247 (52%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GG+ + + E+I LP P I++ + VLLYGPPGCGKT I A A +
Sbjct: 195 LGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVP 254
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR-GHDNTGVTDRV 964
FI++ P +++ G SE+ +R+IF +A APCL+F DE D+I PKR G + R+
Sbjct: 255 FINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQREMEKRI 314
Query: 965 VNQFLTELDGVEV-LTG---VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI 1020
V Q LT +D + + TG V V AT+RPD LD+AL R GR DR + + P+ +R+ I
Sbjct: 315 VAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISI 374
Query: 1021 LKVISRKLPL--ADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKM 1078
LK +++ + L + + ++ +T G+ G + I + +
Sbjct: 375 LKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEESH 434
Query: 1079 PVITDAL 1085
V D++
Sbjct: 435 SVKDDSM 441
Score = 166 (63.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 79/327 (24%), Positives = 135/327 (41%)
Query: 513 GQQNNNTEAVRQLFGKLNSGDSVSFYTVKER--GSTQGFDSNVSSLSWMGTTASDVINRI 570
GQQ + TE ++ K K + ST D +SSL + + + ++ I
Sbjct: 152 GQQADTTELLKGNKRKAKGSAKTQLKKQKRKIDYSTPNID--LSSLGGVESVTTQLLEII 209
Query: 571 KV-LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC 629
+ +L P+ ++ ST P P +L++GPPG GKT++A A+A L+ + F+
Sbjct: 210 GLPILHPE--IYSSTGVEP-PRGVLLYGPPGCGKTTIANALAGELK--------VPFINI 258
Query: 630 SRLSLEKGPI--IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALT 687
S S+ G + L EA AP ++ D + ++A
Sbjct: 259 SAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQREMEKRIVAQ- 317
Query: 688 KFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERK 747
L+ +MDE ++ G P+ + + + + +L +GRFD + L P +R
Sbjct: 318 --LLTLMDELTLEKT---GGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRI 372
Query: 748 AILEHEIQRRSLECSDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH 806
+IL+ + LE + SK GY DL+ LV +A+ R + S ++
Sbjct: 373 SILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKRIFETMSELQEE 432
Query: 807 IKPTLVRDDFSQAMHEFLPVAMRDITK 833
V+DD A L D+ K
Sbjct: 433 SHS--VKDDSMDADPVSLDANKEDMIK 457
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 412 (150.1 bits), Expect = 6.9e-36, Sum P(2) = 6.9e-36
Identities = 86/206 (41%), Positives = 122/206 (59%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
V GL D+ ++KEM++LP +FP F + L + + VLL GPPG GKT +V A A
Sbjct: 199 VAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAY 258
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKA---TAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ + GP L G SE+ +R +F K + P +LF DE D++ PKRG N+ D
Sbjct: 259 LLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSSNSAPED 318
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R+V Q LT LDGV + V AAT+RPD LD AL RPGR DR + P+ +R IL+
Sbjct: 319 RLVAQLLTLLDGVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQ 378
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSG 1048
+++ +P++ D+DL +A MT G+ G
Sbjct: 379 MLTCSMPISTDIDLVKLAEMTTGYVG 404
Score = 367 (134.2 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 98/290 (33%), Positives = 145/290 (50%)
Query: 690 LVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAI 749
L+ ++D G K + + VA+ + + +L GRFD V + P ++R++I
Sbjct: 324 LLTLLDGVGRKDR-------MVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSI 376
Query: 750 LEHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSD-SSFEKHI 807
L+ + S+ S +I L+ +A GY DL L AV HS S E I
Sbjct: 377 LQ--MLTCSMPISTDIDLVKLAEMTTGYVGADLTALCREAAMQAV---FHSSLDSAEVLI 431
Query: 808 KPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFP 867
DF +A + P + R E W+ +GGL D++ +K+ +E P K P
Sbjct: 432 NMA----DFQEAFKKIQPSSFRSAIGLK-ECKPITWEQIGGLEDVKLKLKQSVEWPMKLP 486
Query: 868 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 927
FA+ L VLLYGP GC KT +V A A +C F+SV G EL + Y+G SE+ +
Sbjct: 487 QAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILS 546
Query: 928 DIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG--VTDRVVNQFLTELDGV 975
+F +A A P ++F DE DSI R H +G V++RV++ L ELDGV
Sbjct: 547 QVFRQARANTPAIIFLDEIDSILGSRSHSKSGHGVSERVLSVLLNELDGV 596
Score = 203 (76.5 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 62/162 (38%), Positives = 87/162 (53%)
Query: 956 DNTG--VTDRVVNQFLTELDGVEVLTGVF-VFAATSRPDLLDAALLRPGRLDRLLFCDFP 1012
D G VT+R N+ EL+ E L+ F V AAT+RPD+LD ALLRPGRLDR+++ P
Sbjct: 594 DGVGLKVTERRGNKLQLELEFQETLSRDFMVVAATNRPDMLDDALLRPGRLDRVIYIPPP 653
Query: 1013 SPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDS 1072
+ RL ILK+ + K+PL DV L+ IA T+ FSG + E N +++
Sbjct: 654 DLKGRLSILKICTEKIPLDTDVSLQDIAARTDLFSGADIENLCKEAALLALQE--NGLEA 711
Query: 1073 NEPGKMPVITDALLKSIASKARPSVSEAEKLRLYS-IYGQFL 1113
V +KS+ + +PS+S + L Y IY Q L
Sbjct: 712 TA-----VKHGHFVKSLQT-VKPSLSMKD-LEFYEKIYSQEL 746
Score = 107 (42.7 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 52/213 (24%), Positives = 84/213 (39%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F L +P +L+ GPPG GKT L KAVA+ + ++ SR E +R
Sbjct: 223 FKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPALYG-SRPG-ESEENLR 280
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
E P+++ D + V L + ++D G K
Sbjct: 281 SVFEKG-REMSCEGPTVLFIDEIDALCPKRGSSNSAPEDRLVAQL----LTLLDGVGRKD 335
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+ + VA+ + + +L GRFD V + P ++R++IL+ + S+
Sbjct: 336 R-------MVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQ--MLTCSMPI 386
Query: 762 SDEI-LLDVASKCDGYDAYDLEILVDRTVHAAV 793
S +I L+ +A GY DL L AV
Sbjct: 387 STDIDLVKLAEMTTGYVGADLTALCREAAMQAV 419
Score = 57 (25.1 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 25/105 (23%), Positives = 47/105 (44%)
Query: 29 TRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVARQFAECISLADHTIVQV--R 86
T S LL + S LR + R V+ ++ E R + ++ H +V V
Sbjct: 89 TLSPGLLQPLSSRRLRGAA-VRAVLPGGAPRRAAGLQEAVRDLLTNVYVSPHYVVTVGPN 147
Query: 87 VVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAI-LNQVRIVHE 130
V + VL +++++P+TE+ + S + I L + R++ E
Sbjct: 148 VRAPVLHVEILSVDPVTEEAGLITPQTSVTIKEVITLERYRLLTE 192
Score = 37 (18.1 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 285 CRQAVVHLLFSDSVAKGHVKI-----ARALRLYLNAGLHSWVYLKKC 326
CR+A + +F S+ V I A + + S + LK+C
Sbjct: 411 CREAAMQAVFHSSLDSAEVLINMADFQEAFKKIQPSSFRSAIGLKEC 457
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 390 (142.3 bits), Expect = 4.9e-46, Sum P(2) = 4.9e-46
Identities = 98/293 (33%), Positives = 152/293 (51%)
Query: 690 LVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAI 749
++ ++D GE R+ + V S + + +L GRFD V + P +RKAI
Sbjct: 327 VLTLLDGIGEDRE-------VVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAI 379
Query: 750 LEHEIQRRSLECSDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIK 808
L+ + + S ++ L++ ++ GY DL L AA+ LHS+ + +
Sbjct: 380 LQ--VITSKMPISGQVDLNLLAEMTVGYVGADLTALCRE---AAMQALLHSEKNQDN--- 431
Query: 809 PTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
PT+ DF +A + P + R + + + GW+ +GGL D++ +K+ IE P KFP
Sbjct: 432 PTIDETDFLEAFKKIQPSSFRSVIGVT-DIKPVGWEQIGGLEDVKLKLKQSIEWPLKFPR 490
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + L VLLYGPPGC KT +V A A +C F+SV G +L + ++G SE+ +
Sbjct: 491 EFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQ 550
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGHDNT--GVTDRVVNQFLTELDGVEVLT 979
+F +A A P ++F DE DSI R T V DRV++ L ELDGV + T
Sbjct: 551 VFRQARANTPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELDGVGLKT 603
Score = 386 (140.9 bits), Expect = 3.9e-32, P = 3.9e-32
Identities = 85/206 (41%), Positives = 120/206 (58%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL++ ++++E++ LP ++P A L + VLL GPPG GKT +V A A
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAE 261
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAA---PCLLFFDEFDSIAPKRGHDNTGVTD 962
++V P L G +E+ VR IF +A A P LLF DE D++ P+RG +
Sbjct: 262 LLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPES 321
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
RVV Q LT LDG+ V V +T+RPD LD AL RPGR DR + P+ R+R IL+
Sbjct: 322 RVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQ 381
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSG 1048
VI+ K+P++ VDL +A MT G+ G
Sbjct: 382 VITSKMPISGQVDLNLLAEMTVGYVG 407
Score = 178 (67.7 bits), Expect = 4.9e-46, Sum P(2) = 4.9e-46
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 971 ELDGVEVL-TGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLP 1029
EL+ E+ + V V AAT+RPD+LD ALLRPGRLD++++ P + RL ILKV ++ P
Sbjct: 625 ELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTP 684
Query: 1030 LADDVDLEAIAHMTEGFSG 1048
+ DV LE +A T FSG
Sbjct: 685 MGPDVSLEKVAAETCFFSG 703
Score = 109 (43.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 49/199 (24%), Positives = 83/199 (41%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSN 646
L +P +L+ GPPG GKT L +AVA+ E +L+A E +R+
Sbjct: 231 LEVPRGVLLAGPPGVGKTQLVRAVAR--ETGAELLAVSAPALQGARPGETEENVRRIFKR 288
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
E P+++ D + V+A ++ ++D GE R+
Sbjct: 289 -ARELASRRPTLLFLDEVDALCPRRGGPHQAPESR-VVAQ---VLTLLDGIGEDRE---- 339
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEIL 766
+ V S + + +L GRFD V + P +RKAIL+ + + S ++
Sbjct: 340 ---VVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQ--VITSKMPISGQVD 394
Query: 767 LDVASKCD-GYDAYDLEIL 784
L++ ++ GY DL L
Sbjct: 395 LNLLAEMTVGYVGADLTAL 413
Score = 74 (31.1 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII---RQA 643
L P +L++GPPG KT+L +A+A S FV S L P + +
Sbjct: 497 LTQPKGVLLYGPPGCAKTTLVRALATS--------CRCSFVSVSGADLFS-PFVGDSEKI 547
Query: 644 LSNFISEALDHAPSIVIFDNL 664
LS +A + P+IV D +
Sbjct: 548 LSQVFRQARANTPAIVFLDEI 568
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 489 (177.2 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 113/303 (37%), Positives = 172/303 (56%)
Query: 750 LEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVD--RTVHAAVGRYLHSDSSFEKHI 807
+E EI ++ DE LD+ SK + LE+ +D R H G L S K
Sbjct: 370 IEAEI---TVPTQDE-RLDILSKIGNIYNFPLELHLDVARHTHGFTGGDLCSLLKAAKFA 425
Query: 808 KPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFP 867
+ + + A P +R E W+D+GG +++ I++ + P K P
Sbjct: 426 RGRTHLERVNDARKRIRPTGIRQFI---LEVPNVSWNDIGGNEELKLEIQQAVIWPQKHP 482
Query: 868 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 927
F + + + +LLYGPPGC KT I A A+ + F++VKGPEL +K++G SE+A+R
Sbjct: 483 EAFERFGIDPPAGILLYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIR 542
Query: 928 DIFSKATAAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
D+FS+A AP ++FFDE D++ RG + ++GV+DRV+ Q LTELDG+E + V + AA
Sbjct: 543 DLFSRARQVAPTIVFFDEIDAVGSSRGSEKSSGVSDRVLAQLLTELDGLEKSSRVILLAA 602
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDV-DLEAIAHMTEG 1045
T+RPD LD+ALLRPGRLDR ++ P R IL++ ++K+ D V ++ + T G
Sbjct: 603 TNRPDQLDSALLRPGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSG 662
Query: 1046 FSG 1048
+SG
Sbjct: 663 YSG 665
Score = 61 (26.5 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 590 PGHILIHGPPGSGKTSLAKAVA 611
P +LI G PGSGKT L K VA
Sbjct: 272 PCSVLIWGLPGSGKTLLLKEVA 293
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 512 (185.3 bits), Expect = 2.3e-45, P = 2.3e-45
Identities = 116/266 (43%), Positives = 157/266 (59%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
V DDF+ A++E I + W+D+GGL +++ I + I++P K P +F
Sbjct: 785 VPDDFNAAINEARNQFSDSIGAPRIPNVK--WEDIGGLDLVKDEILDTIDMPLKHPELFN 842
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
L+ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F
Sbjct: 843 NG-LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQ 901
Query: 932 KATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV--EVLTGVFVFAAT 987
+A A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ E GVFV AT
Sbjct: 902 RARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGAT 961
Query: 988 SRPDLLDAALLRPGRLDRLLFCDFPSPRER-LDILKVISRKLPLADDVDLEAIAHMTE-G 1045
+RPDLLD ALLRPGR D++L+ E+ IL+ ++RK L D+V+LE +A
Sbjct: 962 NRPDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFT 1021
Query: 1046 FSGXXXXXXXXXXXXXXVHEILNNID 1071
F+G + + N +D
Sbjct: 1022 FTGADFYALCSDSMLNAMTRVANEVD 1047
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 512 (185.3 bits), Expect = 2.3e-45, P = 2.3e-45
Identities = 116/266 (43%), Positives = 157/266 (59%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
V DDF+ A++E I + W+D+GGL +++ I + I++P K P +F
Sbjct: 785 VPDDFNAAINEARNQFSDSIGAPRIPNVK--WEDIGGLDLVKDEILDTIDMPLKHPELFN 842
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
L+ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F
Sbjct: 843 NG-LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQ 901
Query: 932 KATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV--EVLTGVFVFAAT 987
+A A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ E GVFV AT
Sbjct: 902 RARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGAT 961
Query: 988 SRPDLLDAALLRPGRLDRLLFCDFPSPRER-LDILKVISRKLPLADDVDLEAIAHMTE-G 1045
+RPDLLD ALLRPGR D++L+ E+ IL+ ++RK L D+V+LE +A
Sbjct: 962 NRPDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFT 1021
Query: 1046 FSGXXXXXXXXXXXXXXVHEILNNID 1071
F+G + + N +D
Sbjct: 1022 FTGADFYALCSDSMLNAMTRVANEVD 1047
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 498 (180.4 bits), Expect = 4.3e-45, Sum P(2) = 4.3e-45
Identities = 117/282 (41%), Positives = 165/282 (58%)
Query: 765 ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFL 824
+L DVA+K G+ DL++L D V + L + H L D + + L
Sbjct: 548 VLQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRTTLDMSHFAKNLT--DMQSSFADSL 605
Query: 825 PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLY 884
+ K W D+GGL +++ I+ I LP K ++ + LR RS +LLY
Sbjct: 606 GAPK--VPKVY-------WSDIGGLAKLKDEIQSSIGLPLKHVHLMGKN-LR-RSGILLY 654
Query: 885 GPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFD 944
GPPG GKT + A A C+L F+SV+GPELLN Y+G SEQ VR++FS+A +AAPC+LF D
Sbjct: 655 GPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLD 714
Query: 945 EFDSIAPKRG--HDNTGVTDRVVNQFLTELDGV---EVLTGVFVFAATSRPDLLDAALLR 999
E DS+AP RG D+ GV DRVV+Q L E+DG+ + +F+ AAT+RPDL+D ALLR
Sbjct: 715 ELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLR 774
Query: 1000 PGRLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDLEAIA 1040
PGR D+L + S E + +L+ +++ L VD+E IA
Sbjct: 775 PGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIA 816
Score = 140 (54.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 64/251 (25%), Positives = 113/251 (45%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
IL++GPPG+GKT +AKAVA ++ + L++ G Q + S A
Sbjct: 651 ILLYGPPGTGKTLVAKAVATECN-----LSFLSVQGPELLNMYVGQS-EQNVREVFSRAR 704
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
AP ++ D L + +++ L + MD + S PI
Sbjct: 705 SAAPCVLFLDELDSLAPNRGVAGDSGGVMDRV-VSQLLAE-MDGMSDGDTSK----PIFI 758
Query: 713 VASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLECS---DEILL 767
+A+ + I +L GRFD F+V P A ++ A+L + QR +L+ ++I
Sbjct: 759 LAATNRPDLIDPALLRPGRFDKLFYVG-PCSTAEDKAAVLRAQTQRFALDAGVDMEQIAE 817
Query: 768 DVASKCDGYDAYDLEILVDRTVHAAVGRYL--H-SDSSFEKHIKPTLV---RDDFSQAMH 821
+ S+ G D Y + +AV R + H S + EK + P V +DF+++ +
Sbjct: 818 RLKSEMSGADLYSI---CSNAWLSAVRRTIDGHLSGTISEKELVPENVIVQEEDFTKSFN 874
Query: 822 EFLP-VAMRDI 831
+F+P ++ +D+
Sbjct: 875 KFVPSISAKDL 885
Score = 58 (25.5 bits), Expect = 4.3e-45, Sum P(2) = 4.3e-45
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 576 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHH 617
P S+ H+ P L+ G GSGK+ L AVA+ L H
Sbjct: 349 PKKSACLSSKHI-FPV-FLLQGERGSGKSKLVSAVAQELGMH 388
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 385 (140.6 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 91/254 (35%), Positives = 136/254 (53%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL++ ++++E++ LP ++P A L + VLL GPPG GKT +V A A
Sbjct: 236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAA---PCLLFFDEFDSIAPKRGHDNTGVTD 962
++V P L G +E+ VR +F +A A P LLF DE D++ P+RG +
Sbjct: 296 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 355
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R V Q LT LDG+ V V A+T+RPD LD AL RPGR DR + P+ ++R IL+
Sbjct: 356 RAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQ 415
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVIT 1082
VI+ K+P++ VDL +A MT G+ G +H +L++ + N+ P I
Sbjct: 416 VITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAA---LHALLHS-EKNKDN--PAID 469
Query: 1083 DALLKSIASKARPS 1096
+ K +PS
Sbjct: 470 ETDFFEAFKKIQPS 483
Score = 375 (137.1 bits), Expect = 8.1e-45, Sum P(2) = 8.1e-45
Identities = 92/272 (33%), Positives = 138/272 (50%)
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ VAS + + +L GRFD V + P +RKAIL+ + + ++ L +
Sbjct: 374 VVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVDLSL-L 432
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMR 829
A GY DL L AA+ LHS+ + + P + DF +A + P + R
Sbjct: 433 AEMTVGYVGADLTALCRE---AALHALLHSEKNKDN---PAIDETDFFEAFKKIQPSSFR 486
Query: 830 DITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGC 889
+ + W+ +GGL D++ +K+ IE P KFP F + L VLLYGPPGC
Sbjct: 487 SVIGLM-DIKPVDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGC 545
Query: 890 GKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSI 949
KT +V A A +C F+SV G +L + ++G SE+ + +F +A A P ++F DE DSI
Sbjct: 546 AKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFLDEIDSI 605
Query: 950 APKRGHDNT--GVTDRVVNQFLTELDGVEVLT 979
R T V +RV++ L ELDGV + T
Sbjct: 606 LGSRSISKTECNVQERVLSVLLNELDGVGLKT 637
Score = 183 (69.5 bits), Expect = 8.1e-45, Sum P(2) = 8.1e-45
Identities = 49/126 (38%), Positives = 70/126 (55%)
Query: 981 VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 1040
V + AAT+RPD+LD ALLRPGRLD++++ P + RL ILKV ++ +P+ DV LE IA
Sbjct: 658 VMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIA 717
Query: 1041 HMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEA 1100
T FSG + E N +++ V + LKS+ + +PS+S
Sbjct: 718 AETCFFSGADLGNLCKEAALLALQE--NGLEATT-----VKQEHFLKSLKT-VKPSLSP- 768
Query: 1101 EKLRLY 1106
E L LY
Sbjct: 769 EDLTLY 774
Score = 111 (44.1 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 51/216 (23%), Positives = 84/216 (38%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSN 646
L +P +L+ GPPG GKT L +AVA+ E +L+A E +R+
Sbjct: 265 LAVPRGVLLAGPPGVGKTQLVRAVAR--EAGAELLAVSAPALQGARPGETEENVRRVFGR 322
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
E P+++ D + V + L I G++
Sbjct: 323 -ARELASRGPTLLFLDEVDALCPRRGGAHRAPESRAVAQVLTLLDGIR---GDR------ 372
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEIL 766
+ VAS + + +L GRFD V + P +RKAIL+ + + ++
Sbjct: 373 --DVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVDLS 430
Query: 767 LDVASKCDGYDAYDLEILV-DRTVHAAVGRYLHSDS 801
L +A GY DL L + +HA + + D+
Sbjct: 431 L-LAEMTVGYVGADLTALCREAALHALLHSEKNKDN 465
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 466 (169.1 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 93/207 (44%), Positives = 129/207 (62%)
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
QA+ P A R+ T + W +VG L +++ ++ I P + P FA ++
Sbjct: 482 QAIARIQPAAKREGFSTVPN---TTWSEVGALQNVRKKLEYAIVQPIERPEKFAALGIKP 538
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
+ +LL+GPPGCGKT + A A A FIS+KGPELLNKY+G SE VR +FS+A ++A
Sbjct: 539 SAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRAKSSA 598
Query: 938 PCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAAL 997
PC+LFFDE D++ P R +G T RVVN LTELDGV G++V AT+RPD +D A+
Sbjct: 599 PCILFFDELDALVPTRDFTMSGATSRVVNALLTELDGVGDRQGIYVIGATNRPDSIDEAI 658
Query: 998 LRPGRLDRLLFCDFPSPRERLDILKVI 1024
RPGRL ++ P+P +R DIL+ I
Sbjct: 659 RRPGRLGTDIYVGLPTPEDRFDILRTI 685
Score = 281 (104.0 bits), Expect = 7.5e-20, Sum P(2) = 7.5e-20
Identities = 69/209 (33%), Positives = 110/209 (52%)
Query: 844 DDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACS 903
+D+GG++ I A+++ + LP + +A+ + ++ +LL+GP G GKT +V A A
Sbjct: 197 EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQ 256
Query: 904 LRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDR 963
F+ V L++ G SE+ +R+ F +A APCLLF DE D +A K + R
Sbjct: 257 CAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGAQKAMEVR 316
Query: 964 VVNQFLTELDGVEVLTG----VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
+ ++ LD + T V V AAT+RPD ++ + R R L P R
Sbjct: 317 MSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--RFQELEM-SMPDEAARES 373
Query: 1020 ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
IL+ ++R L+DDVD A+A +T G+ G
Sbjct: 374 ILRTMTRNKRLSDDVDFTALARLTPGYVG 402
Score = 81 (33.6 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 586 HLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALS 645
H P IL+HGP G+GKT++ +A+A +L+ V+ V S +S E IR+A
Sbjct: 228 HKPQAA-ILLHGPSGTGKTAVVRALADTLQCAFVPVSATSLV--SGISGESEKNIREAFD 284
Query: 646 NFISEALDHAPSIVIFDNL 664
EA+ AP ++ D +
Sbjct: 285 ----EAIRLAPCLLFLDEV 299
Score = 43 (20.2 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 459 SGTYGKVPASCNGALENKTKARELRTEIFCVLTFSEESL 497
+ Y + AS N +L + K R L I VLT+ +E L
Sbjct: 39 TSVYESIKAS-NSSLARQ-KRRPLEDSIERVLTYRKEEL 75
Score = 40 (19.1 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 144 ITFHVVSTFPKKPVVQLVPGT-EVAVAPKRRKNNVK----KHEDSYMQAFNESTSIAKAL 198
I H S K VV+ + T + A P + V + E + +AF+E+ +A L
Sbjct: 234 ILLHGPSGTGKTAVVRALADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCL 293
Query: 199 LRVQDSD 205
L + + D
Sbjct: 294 LFLDEVD 300
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 495 (179.3 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 148/474 (31%), Positives = 220/474 (46%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+++HG G+GKT L L+H V+ + R+ K + + +
Sbjct: 247 LVLHGGSGTGKTML-------LDH----VSRTRWGSVHRV---KASDKSKDIQDIFQTVT 292
Query: 653 DHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
A SIV+ D+L + AL + LV + +K K I
Sbjct: 293 GQARSIVLIDDLDELIDKERANRSTV----INALVEGLVSVRQAICDKEKPP---KVIVI 345
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASK 772
A + +P+ L R + LP S R A++ + ++I+ D++ +
Sbjct: 346 AACRDYITIVPEKLRRPYRLQRAILLPPMDMSRRTAVISSLNPPFHPDVKEQIICDLSDR 405
Query: 773 CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKP------TLVRDDFSQAMHE 822
Y+ DL+ L+ T+ V LH + E ++P D A+ E
Sbjct: 406 THAYNGLDLQKLLS-TIDYLVAAKLHHMQPEAAGTESDVRPKPPADTAFYTDSLEAALLE 464
Query: 823 FLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR-SNV 881
P AM+D+ + + WDD+ G ++ ++ + ++ P Q +R+
Sbjct: 465 IRPTAMQDV---NLKPPPVRWDDISGQESVKRDLRLAVHFITR-PKEEIQKFIRVPPKGF 520
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPGC KT A A L F +VKG ELLN Y+G SE+ +RD+FS+A AAAP ++
Sbjct: 521 LLYGPPGCSKTMTAQAMATESGLNFFAVKGAELLNMYVGESERQIRDLFSRARAAAPSMI 580
Query: 942 FFDEFDSIAPKR---GHDNTGVTDR----VVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
FFDE DSIA R G D G T + V+ L E+DG E L GVFV AAT+RP LD
Sbjct: 581 FFDEIDSIAGSRKGFGSDGGGATSQGGLNVLTTLLNEMDGFEDLRGVFVLAATNRPHALD 640
Query: 995 AALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
A++RPGR D +++ P P R IL+ S LA DVD +A +TEG SG
Sbjct: 641 PAIMRPGRFDEIIYVPPPDPAAREAILRKNSAGCQLAPDVDFARLAQLTEGNSG 694
Score = 46 (21.3 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 386 AEDDIIAALSSEPSSKEDEEAVYQFENKKGLE---CLLHTWLLAQLTAVASNIGSEFNTL 442
AE I ++ S++D+ + Q GLE L+ +LL + SN G ++ L
Sbjct: 190 AEIVIATSVDGNEGSRDDQPSDLQIPQVSGLEEQVKKLNDFLLVSSSDRESNTG--WHGL 247
Query: 443 VL-----SNETLLHFEVKGYKSGTYGKVPAS 468
VL + +T+L V + G+ +V AS
Sbjct: 248 VLHGGSGTGKTMLLDHVSRTRWGSVHRVKAS 278
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 375 (137.1 bits), Expect = 5.9e-31, P = 5.9e-31
Identities = 91/254 (35%), Positives = 135/254 (53%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL++ ++++E++ LP ++P L + VLL GPPG GKT +V A A
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAA---PCLLFFDEFDSIAPKRGHDNTGVTD 962
++V P L G +E+ VR +F +A A P LLF DE D++ P+RG +
Sbjct: 262 LLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRG--SRAPES 319
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
RVV Q LT LDG V V AT+RPD LD AL RPGR DR + P+ ++R +IL+
Sbjct: 320 RVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQ 379
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVIT 1082
VI+ K+P++ VDL +A MT G+ G +H +L++ + N+ PVI
Sbjct: 380 VITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAA---MHALLHS-EKNQDN--PVID 433
Query: 1083 DALLKSIASKARPS 1096
+ +PS
Sbjct: 434 EIDFLEAFKNIQPS 447
Score = 368 (134.6 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 92/272 (33%), Positives = 138/272 (50%)
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ V + + + +L GRFD V + P +RK IL+ + + ++ L +
Sbjct: 338 VVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGL-L 396
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMR 829
A GY DL L AA+ LHS+ + + P + DF +A P + R
Sbjct: 397 AEMTVGYVGADLTALCRE---AAMHALLHSEKNQDN---PVIDEIDFLEAFKNIQPSSFR 450
Query: 830 DITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGC 889
+ + W+++GGL D++ +K+ IE P KFP F + L VLLYGPPGC
Sbjct: 451 SVIGLM-DIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGC 509
Query: 890 GKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSI 949
KT +V A A +C F+SV G +L + ++G SE+ + IF +A A+ P +LF DE DSI
Sbjct: 510 AKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSI 569
Query: 950 APKRGHDNTG--VTDRVVNQFLTELDGVEVLT 979
R TG V +RV++ L ELDGV + T
Sbjct: 570 LGARSASKTGCDVQERVLSVLLNELDGVGLKT 601
Score = 184 (69.8 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 48/126 (38%), Positives = 70/126 (55%)
Query: 981 VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 1040
V + AAT+RPD+LD ALLRPGRLD++++ P + RL ILKV ++ +P+ DV LE +A
Sbjct: 622 VMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLA 681
Query: 1041 HMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEA 1100
T FSG + E N +D+ V + LKS+ + +PS+S
Sbjct: 682 AETCFFSGADLRNLCTEAALLALQE--NGLDATT-----VKQEHFLKSLKT-VKPSLS-C 732
Query: 1101 EKLRLY 1106
+ L LY
Sbjct: 733 KDLALY 738
Score = 91 (37.1 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 40/165 (24%), Positives = 63/165 (38%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSN 646
L +P +L+ GPPG GKT L +AVA+ E +L+A E +R+
Sbjct: 231 LAVPRGVLLAGPPGVGKTQLVRAVAR--EAGAELLAVSAPALQGSRPGETEENVRRVFQR 288
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
E PS++ D + V+A L+D + G
Sbjct: 289 -ARELASRGPSLLFLDEMDALCPQRGSRAPESR---VVAQVLTLLD----------GASG 334
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILE 751
+ V + + + +L GRFD V + P +RK IL+
Sbjct: 335 DREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQ 379
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 385 (140.6 bits), Expect = 4.6e-32, P = 4.6e-32
Identities = 91/254 (35%), Positives = 136/254 (53%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL++ ++++E++ LP ++P A L + VLL GPPG GKT +V A A
Sbjct: 192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 251
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAA---PCLLFFDEFDSIAPKRGHDNTGVTD 962
++V P L G +E+ VR +F +A A P LLF DE D++ P+RG +
Sbjct: 252 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 311
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R V Q LT LDG+ V V A+T+RPD LD AL RPGR DR + P+ ++R IL+
Sbjct: 312 RAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQ 371
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVIT 1082
VI+ K+P++ VDL +A MT G+ G +H +L++ + N+ P I
Sbjct: 372 VITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAA---LHALLHS-EKNKDN--PAID 425
Query: 1083 DALLKSIASKARPS 1096
+ K +PS
Sbjct: 426 ETDFFEAFKKIQPS 439
Score = 365 (133.5 bits), Expect = 7.8e-44, Sum P(2) = 7.8e-44
Identities = 92/274 (33%), Positives = 139/274 (50%)
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ VAS + + +L GRFD V + P +RKAIL+ + + ++ L +
Sbjct: 330 VVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVDLSL-L 388
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMR 829
A GY DL L AA+ LHS+ + + P + DF +A + P + R
Sbjct: 389 AEMTVGYVGADLTALCRE---AALHALLHSEKNKDN---PAIDETDFFEAFKKIQPSSFR 442
Query: 830 DITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGC 889
+ + W+ +GGL D++ +K+ IE P KFP F + L VLLYGPPGC
Sbjct: 443 SVIGLM-DIKPVDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGC 501
Query: 890 GKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAV--RDIFSKATAAAPCLLFFDEFD 947
KT +V A A +C F+SV G +L + ++G SE+ + + +F +A A P ++F DE D
Sbjct: 502 AKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQQKVFRQARANTPAIVFLDEID 561
Query: 948 SIAPKRGHDNT--GVTDRVVNQFLTELDGVEVLT 979
SI R T V +RV++ L ELDGV + T
Sbjct: 562 SILGSRSISKTECNVQERVLSVLLNELDGVGLKT 595
Score = 183 (69.5 bits), Expect = 7.8e-44, Sum P(2) = 7.8e-44
Identities = 49/126 (38%), Positives = 70/126 (55%)
Query: 981 VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 1040
V + AAT+RPD+LD ALLRPGRLD++++ P + RL ILKV ++ +P+ DV LE IA
Sbjct: 616 VMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIA 675
Query: 1041 HMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEA 1100
T FSG + E N +++ V + LKS+ + +PS+S
Sbjct: 676 AETCFFSGADLGNLCKEAALLALQE--NGLEATT-----VKQEHFLKSLKT-VKPSLSP- 726
Query: 1101 EKLRLY 1106
E L LY
Sbjct: 727 EDLTLY 732
Score = 111 (44.1 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 51/216 (23%), Positives = 84/216 (38%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSN 646
L +P +L+ GPPG GKT L +AVA+ E +L+A E +R+
Sbjct: 221 LAVPRGVLLAGPPGVGKTQLVRAVAR--EAGAELLAVSAPALQGARPGETEENVRRVFGR 278
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
E P+++ D + V + L I G++
Sbjct: 279 -ARELASRGPTLLFLDEVDALCPRRGGAHRAPESRAVAQVLTLLDGIR---GDR------ 328
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEIL 766
+ VAS + + +L GRFD V + P +RKAIL+ + + ++
Sbjct: 329 --DVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVDLS 386
Query: 767 LDVASKCDGYDAYDLEILV-DRTVHAAVGRYLHSDS 801
L +A GY DL L + +HA + + D+
Sbjct: 387 L-LAEMTVGYVGADLTALCREAALHALLHSEKNKDN 421
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 381 (139.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 92/254 (36%), Positives = 134/254 (52%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL + ++++E++ LP +P FA L + VLL GPPG GKT +V A A
Sbjct: 202 LGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAA---PCLLFFDEFDSIAPKRGHDNTGVTD 962
++V P L G +E+ VR +F +A A P LLF DE D++ P+RG +
Sbjct: 262 LLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRRGGPHQAPES 321
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
RVV Q LT LDG+ V V +T+RPD LD AL RPGR DR + P+ +R IL+
Sbjct: 322 RVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQ 381
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVIT 1082
VI+ K+P++ VDL +A MT G+ G +H +L++ N+ P+I
Sbjct: 382 VITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAA---MHALLHS-GKNQDN--PLID 435
Query: 1083 DALLKSIASKARPS 1096
+ K +PS
Sbjct: 436 EIDFLEAFKKIQPS 449
Score = 369 (135.0 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 92/272 (33%), Positives = 136/272 (50%)
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ V S + + +L GRFD V + P +RKAIL+ + + ++ L +
Sbjct: 340 VVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQVITSKMPISSQVDLSL-L 398
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMR 829
A GY DL L AA+ LHS + + P + DF +A + P + R
Sbjct: 399 AEMTVGYVGADLTALCRE---AAMHALLHSGKNQDN---PLIDEIDFLEAFKKIQPSSFR 452
Query: 830 DITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGC 889
+ + W+ +GGL D + +K+ IE P KFP F + L VLLYGPPGC
Sbjct: 453 SVIGLM-DVKPITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGC 511
Query: 890 GKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSI 949
KT +V A A +C F+SV G +L + ++G SE+ + +F +A A P ++F DE DSI
Sbjct: 512 AKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSI 571
Query: 950 APKRGHDNTG--VTDRVVNQFLTELDGVEVLT 979
R TG V +RV++ L ELDGV + T
Sbjct: 572 LGSRSISKTGCNVQERVLSVLLNELDGVGLKT 603
Score = 177 (67.4 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 46/128 (35%), Positives = 71/128 (55%)
Query: 979 TGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEA 1038
+ V + AAT+RPD+LD ALLRPGRLD++++ P + RL IL+V ++ +P+ DV LE
Sbjct: 622 SNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLEN 681
Query: 1039 IAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVS 1098
+A T FSG + E N +++ V + LKS+ + +PS+S
Sbjct: 682 LAAETCLFSGADLGNLCKEAALLALQE--NGLEATT-----VKQEHFLKSLKT-VKPSLS 733
Query: 1099 EAEKLRLY 1106
+ L LY
Sbjct: 734 HKD-LALY 740
Score = 113 (44.8 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 55/220 (25%), Positives = 89/220 (40%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
LL P S F++ L +P +L+ GPPG GKT L +AVA+ E +L+A
Sbjct: 220 LLYPRS---FASLGLAVPRGVLLAGPPGVGKTQLVRAVAR--EAGAELLAVSAPALQGAR 274
Query: 633 SLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVD 692
E +R+ E P+++ D + V+A L+D
Sbjct: 275 PGETEENVRRVFQR-AQELAGRRPTLLFLDEVDALCPRRGGPHQAPESR-VVAQVLTLLD 332
Query: 693 IMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEH 752
+ G++ + V S + + +L GRFD V + P +RKAIL+
Sbjct: 333 GIS--GDRE--------VVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQV 382
Query: 753 EIQRRSLECSDEILLDVASKCDGYDAYDLEILV-DRTVHA 791
+ + ++ L +A GY DL L + +HA
Sbjct: 383 ITSKMPISSQVDLSL-LAEMTVGYVGADLTALCREAAMHA 421
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 497 (180.0 bits), Expect = 3.3e-43, Sum P(3) = 3.3e-43
Identities = 95/229 (41%), Positives = 141/229 (61%)
Query: 844 DDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACS 903
D++G L I+ ++ LP K+ NI+ + +LLYGPPGCGKT + A +
Sbjct: 676 DNIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAKAISNEMK 735
Query: 904 LRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT-GVTD 962
FI++KGPE+LNKY+G SE+ VR+IFS A+ PCL+FFDE DSI R ++ + +D
Sbjct: 736 ANFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSICINRSNNKSVSASD 795
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
RVVNQ L+E+DG+ GV++ A T+RPD++D ALLR GR D+L++ P + R+DILK
Sbjct: 796 RVVNQLLSEMDGLSQREGVYIIATTNRPDIIDKALLRSGRFDQLIYISLPKYQGRVDILK 855
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNID 1071
+S+ +P+ +V E I+ +T G+SG + E + ID
Sbjct: 856 KLSKNMPIDKNVRFEEISKLTRGYSGADLYGVLRESAFIALQECRDKID 904
Score = 49 (22.3 bits), Expect = 3.3e-43, Sum P(3) = 3.3e-43
Identities = 24/125 (19%), Positives = 56/125 (44%)
Query: 173 RKNNVKKHEDSYMQAFN--ESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVAFIN 230
+KN ++K E+ N + S+ ++LLR + + S K + G+ + + S+ F+N
Sbjct: 16 KKNFIRKDENKENNLKNVLSNCSVIESLLRKEFQEYRRSPKNKLYGLIMNIIKKSL-FVN 74
Query: 231 PET--AENVSLCSLELVAILPRLSSKENNPENNAPRI--KSNLTSKEISGGASTDKKECR 286
+ + ++ + + + NN NN I +++ S +I+ + CR
Sbjct: 75 YDKFMIKYINKKKKKKMKLNNNCQVNNNNNNNNNNFIYDTNHIISNDITTCDIIEGDNCR 134
Query: 287 QAVVH 291
+++
Sbjct: 135 STILN 139
Score = 46 (21.3 bits), Expect = 3.3e-43, Sum P(3) = 3.3e-43
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 360 DNKNHKTKKMLEKTSSGIYMDDGDLSAED-DIIAALSSEPSSKEDEEAVYQF 410
DNKN+K + + E + Y D L +D DII SSK+D +Y F
Sbjct: 327 DNKNNKLRILFEHIKNE-Y-DKAILCIDDIDIIF------SSKDDSTDLYLF 370
Score = 46 (21.3 bits), Expect = 1.1e-42, Sum P(4) = 1.1e-42
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 593 ILIHGPPGSGKTSLAKAVA 611
I I G G+GKT+L+ A+A
Sbjct: 287 INIFGTSGTGKTTLSYAIA 305
Score = 38 (18.4 bits), Expect = 1.1e-42, Sum P(4) = 1.1e-42
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 757 RSLECSDEILLDVASKCDGYDAY 779
+++ C D+I + +SK D D Y
Sbjct: 346 KAILCIDDIDIIFSSKDDSTDLY 368
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 445 (161.7 bits), Expect = 3.0e-42, Sum P(2) = 3.0e-42
Identities = 94/235 (40%), Positives = 134/235 (57%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GGL I+E++ELP K P +F + + +LLYGPPG GKT + A A
Sbjct: 169 YEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATET 228
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG--- 959
+ FI V G EL+ K+IG V+DIF A AP ++F DE D+IA KR TG
Sbjct: 229 NATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDR 288
Query: 960 VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
R + Q L E+DG + V + AT+RPD+LD A+LRPGR DR++ P + RL+
Sbjct: 289 EVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLE 348
Query: 1020 ILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNE 1074
ILK+ +RK+ LA+DV+LE IA MTEG G + E+ + + ++
Sbjct: 349 ILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDD 403
Score = 127 (49.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 45/196 (22%), Positives = 85/196 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL++GPPG+GKT LAKAVA E + + + + E +++ +
Sbjct: 204 PKGILLYGPPGTGKTLLAKAVAT--ETNATFIRVVGSELVKKFIGEGASLVK----DIFK 257
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A + APSI+ D + L + L + MD + + G
Sbjct: 258 LAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAE-MDGFDAR-------GD 309
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ + + + + ++ GRFD +++PAP R IL+ I R + ++++ L+
Sbjct: 310 VKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILK--IHTRKMNLAEDVNLEE 367
Query: 769 VASKCDGYDAYDLEIL 784
+A +G +L+ +
Sbjct: 368 IAKMTEGCVGAELKAI 383
Score = 41 (19.5 bits), Expect = 3.0e-42, Sum P(2) = 3.0e-42
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 24 ETLESTRSAHLLPQVLSLELRSRSNQR 50
E E R A L ++L LEL + +R
Sbjct: 42 ELQEKARIAELESRILKLELEKKELER 68
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 473 (171.6 bits), Expect = 4.8e-42, P = 4.8e-42
Identities = 122/381 (32%), Positives = 196/381 (51%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y + P +L++GPPG+GKT +AKA+A + H ++ + S+ E +R
Sbjct: 344 FKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEII--SKFYGESESRLR 401
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
Q +EA PSI+ D L V +L + +MD G +
Sbjct: 402 Q----IFAEASLRRPSIIFIDELDALCPKREGAQNEVEKRVVASL----LTLMDGIGSEG 453
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQR--RSL 759
G + + + + +L GRFD +++ P A +R IL+ +++ SL
Sbjct: 454 SE----GQLVVLGATNRPHALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLKKVPHSL 509
Query: 760 ECSDEILLDVASKCDGYDAYDLEILVDRT-VHA---AVGRYLH-SDSSFEKHIKPTLVRD 814
++ ++ +A GY DL L ++A A+G+ H SD+ + + +
Sbjct: 510 TAAE--MMQLADSAHGYVGADLAALCKEAGLYALRRALGKRAHPSDTEVAGSVM--IAFN 565
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF Q M + P AMR++ + + + W D+GGL D++ +K+ +E P K P+ F +
Sbjct: 566 DFLQGMKDVRPSAMREV---AVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMG 622
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VLLYGPPGC KT I A A L F++VKGPEL+NKY+G SE+AVR+IF KA
Sbjct: 623 IQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKAR 682
Query: 935 AAAPCLLFFDEFDSIAPKRGH 955
+P +LFFDE D++A +RG+
Sbjct: 683 MVSPSILFFDEIDALAVERGN 703
Score = 366 (133.9 bits), Expect = 4.6e-30, P = 4.6e-30
Identities = 86/236 (36%), Positives = 129/236 (54%)
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
S+ F+ M +I + S G + +D +GGL+ I+E +ELP K +F +
Sbjct: 292 SRTRINFIEARM-NIAEDSDHGPQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGIS 350
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPG GKT I A A + GPE+++K+ G SE +R IF++A+
Sbjct: 351 PPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLR 410
Query: 937 APCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGV--EVLTG-VFVFAATSRPDLL 993
P ++F DE D++ PKR V RVV LT +DG+ E G + V AT+RP L
Sbjct: 411 RPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHAL 470
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLA-DDVDLEAIAHMTEGFSG 1048
DAAL RPGR D+ + P+ ++RLDIL+ + +K+P + ++ +A G+ G
Sbjct: 471 DAALRRPGRFDKEIEIGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVG 526
>WB|WBGene00004195 [details] [associations]
symbol:prx-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0002119 GO:GO:0040015 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00550000074953 EMBL:AB010968
EMBL:AB012224 EMBL:FO080622 PIR:T37276 RefSeq:NP_504268.1
UniGene:Cel.19362 ProteinModelPortal:G5EFR8 SMR:G5EFR8
EnsemblMetazoa:F39G3.7 GeneID:266912 KEGG:cel:CELE_F39G3.7
CTD:266912 WormBase:F39G3.7 OMA:AVATEFK NextBio:953402
Uniprot:G5EFR8
Length = 720
Score = 470 (170.5 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 108/255 (42%), Positives = 149/255 (58%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
W+DVGGL + + + E I N+F L+ RS ++LYG PGCGKT I A A
Sbjct: 464 WEDVGGLEETKQTVLESIRT-----NLFGSRALK-RSGIILYGSPGCGKTLIAKAVATEF 517
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGV 960
+ F+SVKGPELLNKY+G SE+ +R +F +A A+PC++FFDE DS+AP RG D+ GV
Sbjct: 518 KIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGRNGDSGGV 577
Query: 961 TDRVVNQFLTELDGVE--VLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE-R 1017
DR+V+Q L ELD + LT VFV AT+RPDLLD +L+ PGR D+L+ E +
Sbjct: 578 IDRIVSQLLAELDKLHNSPLTKVFVMGATNRPDLLDNSLMTPGRFDKLVEVKPGEDVESK 637
Query: 1018 LDILKVISRKLPLADDVDLEAIAH-MTEGFSGXXXXXXXXXXXXXXVHEILNNIDSN--E 1074
IL+ +SRK+ +DVDL IA + E SG + E + +I+ E
Sbjct: 638 TKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQLFSIISNAGMAAIVETIQSIEDGKTE 697
Query: 1075 PGKMPVITDALLKSI 1089
+ V LL+S+
Sbjct: 698 NQSIRVAQRHLLESV 712
Score = 45 (20.9 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 22/106 (20%), Positives = 51/106 (48%)
Query: 683 VIALTKF-LVD--IMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLP 739
V+A+ +F +D I+ +Y E++ S + F + ++ +P ++ + + F +
Sbjct: 328 VLAIDQFNALDRRIL-QYMEQKLSEPSKITVIFSCNTDTMSSMPANVKNLALYTFSAEFM 386
Query: 740 APAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILV 785
++RK L++ + ++++ VA K G+ +LE LV
Sbjct: 387 DE--NDRKTWLQYYL-------NEKLANHVAKKTSGFTLAELEKLV 423
Score = 40 (19.1 bits), Expect = 1.3e-41, Sum P(3) = 1.3e-41
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKD 619
+L+ G GSGK +++ A E H++
Sbjct: 261 LLVTGASGSGKRLMSRVFAS--ETHRN 285
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 429 (156.1 bits), Expect = 1.9e-41, Sum P(3) = 1.9e-41
Identities = 80/183 (43%), Positives = 119/183 (65%)
Query: 840 RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 899
++ + D+GG ++ I E + P K+ NI+ + + +LLYGPPGC KT A A
Sbjct: 831 KTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIA 890
Query: 900 AACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 959
+ + FISVKGPE+ +KY+G SE+++R+IF KA PC++FFDE DSIA R ++
Sbjct: 891 SEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNF 950
Query: 960 VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
V++RV+ Q L E+DG++ V + AAT+RPDL+D AL+RPGR DR+++ P+ R
Sbjct: 951 VSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFA 1010
Query: 1020 ILK 1022
ILK
Sbjct: 1011 ILK 1013
Score = 99 (39.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 840 RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHI 894
+ G + +GG I+ I I +P + +I+ + + +LL+GPPGCGKT+I
Sbjct: 420 KKGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYI 474
Score = 99 (39.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 940 LLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
++F DE + + KR +N + + L +DG++ T + AT+ + +D AL R
Sbjct: 558 IIFIDEIEILCKKREENNN--MNIYTSVLLNNMDGIKKHTHTILIGATNYINKIDLALRR 615
Query: 1000 PGRLDRLLFCDFPSPRERLDILK 1022
GR D+ + + P+ ++R+ I +
Sbjct: 616 SGRFDKEIEVNLPNLKDRISIFQ 638
Score = 82 (33.9 bits), Expect = 1.9e-41, Sum P(3) = 1.9e-41
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSL 614
+ YH+ + IL+HGPPG GKT +A + + L
Sbjct: 450 YDAYHIDIHKGILLHGPPGCGKTYIALLIKEEL 482
Score = 69 (29.3 bits), Expect = 1.9e-41, Sum P(3) = 1.9e-41
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASK 772
+ + + KI +L SGRFD +++ P +R +I + ++ + + +A
Sbjct: 600 IGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNLIKHNIGKKKIHKLADL 659
Query: 773 CDGYDAYDLEILVD 786
C + D+ L++
Sbjct: 660 CQSFTCSDINSLIN 673
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 429 (156.1 bits), Expect = 1.9e-41, Sum P(3) = 1.9e-41
Identities = 80/183 (43%), Positives = 119/183 (65%)
Query: 840 RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 899
++ + D+GG ++ I E + P K+ NI+ + + +LLYGPPGC KT A A
Sbjct: 831 KTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIA 890
Query: 900 AACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 959
+ + FISVKGPE+ +KY+G SE+++R+IF KA PC++FFDE DSIA R ++
Sbjct: 891 SEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNF 950
Query: 960 VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
V++RV+ Q L E+DG++ V + AAT+RPDL+D AL+RPGR DR+++ P+ R
Sbjct: 951 VSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFA 1010
Query: 1020 ILK 1022
ILK
Sbjct: 1011 ILK 1013
Score = 99 (39.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 840 RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHI 894
+ G + +GG I+ I I +P + +I+ + + +LL+GPPGCGKT+I
Sbjct: 420 KKGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYI 474
Score = 99 (39.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 940 LLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLR 999
++F DE + + KR +N + + L +DG++ T + AT+ + +D AL R
Sbjct: 558 IIFIDEIEILCKKREENNN--MNIYTSVLLNNMDGIKKHTHTILIGATNYINKIDLALRR 615
Query: 1000 PGRLDRLLFCDFPSPRERLDILK 1022
GR D+ + + P+ ++R+ I +
Sbjct: 616 SGRFDKEIEVNLPNLKDRISIFQ 638
Score = 82 (33.9 bits), Expect = 1.9e-41, Sum P(3) = 1.9e-41
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSL 614
+ YH+ + IL+HGPPG GKT +A + + L
Sbjct: 450 YDAYHIDIHKGILLHGPPGCGKTYIALLIKEEL 482
Score = 69 (29.3 bits), Expect = 1.9e-41, Sum P(3) = 1.9e-41
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASK 772
+ + + KI +L SGRFD +++ P +R +I + ++ + + +A
Sbjct: 600 IGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNLIKHNIGKKKIHKLADL 659
Query: 773 CDGYDAYDLEILVD 786
C + D+ L++
Sbjct: 660 CQSFTCSDINSLIN 673
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 460 (167.0 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 119/367 (32%), Positives = 198/367 (53%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE------------ 760
+++ S+E I QS+T +GR D + L P S+R IL + ++ L+
Sbjct: 341 LSTCTSVENIDQSITRAGRIDKFIHLTIPTQSKRMLILSNLLKNTPLQYDTNNNNDDIDQ 400
Query: 761 CS----DEILLDVASKCDGYDAYDLEILVDRTVHA-AVGRYLHSD---SSFEKHIKPTLV 812
C ++ +++++ G+ DL L RTV V + + + EK IK +
Sbjct: 401 CKIKDKEQFIVELSKITPGFLFKDLTKLC-RTVSLLTVSSFEEEEEEENENEKEIKISF- 458
Query: 813 RDDFSQAMHEFLPVAMR--DITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIF 870
F +A+ P + D+T + + WD +GG ++ +++IE P K+ + F
Sbjct: 459 -KIFKEALKFIKPSTLINFDVTVQNVK-----WDRIGGYKQVKERFRQLIEWPLKYQDTF 512
Query: 871 AQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIF 930
+ L S +LL+GP GCGK+ +V A A S+ FIS+KG ++ +K++G SE+ +RD+F
Sbjct: 513 KRLSLNNSSGLLLHGPSGCGKSLMVKAIATEMSINFISIKGSDIYSKWLGESERIIRDLF 572
Query: 931 SKATAAAPCLLFFDEFDSIAPKRGH--DNT--GVTDRVVNQFLTELDGVEVLTGVFVFAA 986
A ++PC++FFDE DS+ RG DN G + R+++Q L E+DG++V + +F+
Sbjct: 573 KSARLSSPCIMFFDEIDSLTLSRGSGDDNEDGGTSKRILSQLLNEMDGIQVKSQIFLIGC 632
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVIS-RKLPL-ADDVDLEA---IAH 1041
T+ +D+ALLRPGR + L+ D PS +RLDIL V+S L D++ + IA
Sbjct: 633 TNSIQSIDSALLRPGRFESLIHIDLPSLDDRLDILNVLSTNSLNFNKDEITQQVWLDIAT 692
Query: 1042 MTEGFSG 1048
T GF+G
Sbjct: 693 QTSGFTG 699
Score = 45 (20.9 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEH 616
ILI GP G+ K L + +A+ +
Sbjct: 248 ILIDGPEGTSKLQLIEYIAQQYNY 271
Score = 40 (19.1 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 428 LTAVASNIGSEFNTLVLSNETLLHFEVK 455
+T NI S +N +L+N F K
Sbjct: 102 VTITIKNINSPYNGKILNNSIKRFFSYK 129
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 391 (142.7 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 90/259 (34%), Positives = 133/259 (51%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GG+ D+ ++KEMI P ++P Q L +LL GPPG GKT +V A
Sbjct: 189 LGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGAT 248
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAA---PCLLFFDEFDSIAPKRGHDNTGVTD 962
++V GPE+ G SE+ +R +F +A AA PC+L DE DS+ P+R ++ +
Sbjct: 249 LVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSLCPRRTGSSSAPEN 308
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R+V Q LT +D + G + AT++PD LD AL RPGR DR + PS +R ILK
Sbjct: 309 RLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILK 368
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVIT 1082
+ R++PL+ DVDL +A MT G+ G + + + ++EP M
Sbjct: 369 CVCREMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMRH--SQMGASEPVSMQHFM 426
Query: 1083 DALLKSIASKARPSVSEAE 1101
AL S R S+ +
Sbjct: 427 QALRHVQPSCLRSSIGATD 445
Score = 343 (125.8 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 89/270 (32%), Positives = 138/270 (51%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASK 772
+ + + + +L GRFD V + P+ +R++IL+ + L D L +A
Sbjct: 330 IGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCREMPLS-PDVDLNTLAEM 388
Query: 773 CDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDIT 832
GY DL L R AA+ HS + + F QA+ P +R +
Sbjct: 389 TCGYVGADLSAL-SR--EAALQAMRHSQMGASEPVS----MQHFMQALRHVQPSCLRS-S 440
Query: 833 KTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKT 892
+ + GW+ +GGL D++ +K+ IE P +FP F + + VLLYGPPGC KT
Sbjct: 441 IGATDFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKT 500
Query: 893 HIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPK 952
+V AAA++ F S+ G EL + Y+G SE+ + +F++A A AP ++F DE DS+
Sbjct: 501 TLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGS 560
Query: 953 R--GHDNT-GVTDRVVNQFLTELDGVEVLT 979
R G ++ V +V++ LTELDGV V T
Sbjct: 561 REDGSSSSHSVQSQVLSVLLTELDGVGVRT 590
Score = 166 (63.5 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 981 VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 1040
V + AAT+RP+ LD+ALLRPGRLD++++ P + RL +L++ ++ +PL DV LE +A
Sbjct: 626 VLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDLA 685
Query: 1041 HMTEGFSG 1048
TE FSG
Sbjct: 686 AQTELFSG 693
Score = 100 (40.3 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 60/254 (23%), Positives = 97/254 (38%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSN 646
L P +L+ GPPG GKT L + VAK + + + V SR E +R+
Sbjct: 218 LSCPRGLLLIGPPGVGKTLLVRCVAKDIGATL-VTVNGPEVTGSRPG-ESEENLRRVFEQ 275
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
+A D P +++ D + V L + +MD G
Sbjct: 276 -ARDAADDGPCVLLIDEIDSLCPRRTGSSSAPENRLVAQL----LTLMDAIGSHE----- 325
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEIL 766
G + A+ Q + + +L GRFD V + P+ +R++IL+ + L D L
Sbjct: 326 -GFVIIGATNQP-DSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCREMPLS-PDVDL 382
Query: 767 LDVASKCDGYDAYDLEILVDRTV-----HAAVGRYLH-SDSSFE---KHIKPTLVRDDFS 817
+A GY DL L H+ +G S F +H++P+ +R
Sbjct: 383 NTLAEMTCGYVGADLSALSREAALQAMRHSQMGASEPVSMQHFMQALRHVQPSCLRSSIG 442
Query: 818 QAMHEFLPVAMRDI 831
+F P+ I
Sbjct: 443 AT--DFKPIGWEQI 454
Score = 85 (35.0 bits), Expect = 9.4e-12, Sum P(3) = 9.4e-12
Identities = 33/122 (27%), Positives = 50/122 (40%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII---RQALSN 646
P +L++GPPG KT+L KA A S +H F S L P + + L+
Sbjct: 486 PRGVLLYGPPGCAKTTLVKAAASS--------SHCSFFSLSGAELFS-PYVGDSEKTLAQ 536
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEK---RKS 703
++A APSIV D + L+ L ++ D G + R+S
Sbjct: 537 LFAQARACAPSIVFLDEVDSMVGSREDGSSSSHSVQSQVLSVLLTEL-DGVGVRTLERRS 595
Query: 704 SC 705
+C
Sbjct: 596 TC 597
Score = 45 (20.9 bits), Expect = 1.6e-39, Sum P(3) = 1.6e-39
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 359 LDNKNHKTKKMLEKTSSGIYMDDGDL 384
L++K +++ L++ GIY+ +G L
Sbjct: 107 LEHKKRVSERSLQELLDGIYVHEGHL 132
Score = 42 (19.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 201 VQDSDEGLSHKCNVKGVELGVALTSVAFINPETAENVSLC 240
V ++G S +V+ L V LT + + T E S C
Sbjct: 558 VGSREDGSSSSHSVQSQVLSVLLTELDGVGVRTLERRSTC 597
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 368 (134.6 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 83/206 (40%), Positives = 117/206 (56%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL++ ++++E++ LP +P A L + VLL GPPG GKT +V A A
Sbjct: 195 LGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 254
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAA---PCLLFFDEFDSIAPKRGHDNTGVTD 962
++V P L G +E+ VR +F +A A P LLF DE D++ P+RG
Sbjct: 255 LLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRRGGPQRAPES 314
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
RVV Q LT LDG+ V V AT+RPD LD AL RPGR DR + P+ ++R IL
Sbjct: 315 RVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILG 374
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSG 1048
VI+ K+P++ +DL +A MT G+ G
Sbjct: 375 VITSKMPISSHIDLGLLAEMTVGYVG 400
Score = 346 (126.9 bits), Expect = 4.2e-39, Sum P(2) = 4.2e-39
Identities = 88/273 (32%), Positives = 137/273 (50%)
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ V + +++ +L GRFD V + P +R+AIL + + ++ L +
Sbjct: 333 VVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVITSKMPISSHIDLGL-L 391
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMR 829
A GY DL L A+ L ++ + P + DF +A + P + R
Sbjct: 392 AEMTVGYVGADLTALCREAATCAL---LKNEKNQNN---PKIEETDFLEAFKKVQPSSFR 445
Query: 830 D-ITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPG 888
I T GW+ +GGL D++ +K+ +E P KFP FA+ L +LLYGPPG
Sbjct: 446 SSIGLTDIRP--VGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPG 503
Query: 889 CGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDS 948
C KT +V A A +C F+SV G +L + ++G SE+ + +F +A A P L+F DE DS
Sbjct: 504 CAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDS 563
Query: 949 IAPKRGHDNTG--VTDRVVNQFLTELDGVEVLT 979
+ R ++G +RV++ L ELDGV V T
Sbjct: 564 VLGSRSVGSSGCDARERVLSVLLNELDGVGVRT 596
Score = 158 (60.7 bits), Expect = 4.2e-39, Sum P(2) = 4.2e-39
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 976 EVLT-GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDV 1034
E+L+ V + AT+RPD+LD ALLRPGRLD++++ P RL ILKV + +P+ +V
Sbjct: 611 EILSRSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNV 670
Query: 1035 DLEAIAHMTEGFSG 1048
LE +A T FSG
Sbjct: 671 SLENLAAETCYFSG 684
Score = 96 (38.9 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 47/198 (23%), Positives = 79/198 (39%)
Query: 587 LPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSN 646
L +P +L+ GPPG GKT L +AVA+ E +L+A E +R+
Sbjct: 224 LAVPRGVLLAGPPGVGKTQLVRAVAR--EAGAELLAVSAPALQGTRPGETEENVRRVFQR 281
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
E PS++ D + V+A L+D + +G++
Sbjct: 282 -AQELASRGPSLLFLDEVDALCPRRGGPQRAPESR-VVAQVLTLLDGI--HGDRE----- 332
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEIL 766
+ V + +++ +L GRFD V + P +R+AIL + + ++
Sbjct: 333 ---VVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVITSKMPISSHIDLG 389
Query: 767 LDVASKCDGYDAYDLEIL 784
L +A GY DL L
Sbjct: 390 L-LAEMTVGYVGADLTAL 406
Score = 38 (18.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 171 KRRKNNVKKHEDSYMQAFNE 190
++ +NN K E +++AF +
Sbjct: 419 EKNQNNPKIEETDFLEAFKK 438
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 412 (150.1 bits), Expect = 2.6e-37, P = 2.6e-37
Identities = 109/273 (39%), Positives = 146/273 (53%)
Query: 789 VHAAVGRYLHS-DSSFE-KHIKPTL---VRDDFSQAMHEFLPVAMRDITKTSA--EGGRS 841
VH G+Y+ D S + I P+ +R+D S +H LP + + + S
Sbjct: 101 VHPE-GKYVVDIDKSIDITKITPSTRVALRND-SYVLHLVLPSKVDPLVNLMKVEKVPDS 158
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
+D +GGL IKE+IELP K P +F + VLLYGPPG GKT + A A
Sbjct: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
FI V G EL+ KYIG + VR++F A AP ++F DE DSI R +G
Sbjct: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
Query: 962 D----RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE- 1016
D R + + L +LDG E + V AT+R D+LD ALLRPGR+DR + +FP+P E
Sbjct: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI--EFPNPNEE 336
Query: 1017 -RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R DILK+ SRK+ L +DL+ IA G SG
Sbjct: 337 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASG 369
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 61/238 (25%), Positives = 101/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 187 FESLGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKYIGEG 239
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + V L++ +D +
Sbjct: 240 SRMVRELFVM-AREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K I + + ++ + Q+L GR D ++ P P R IL+ I R +
Sbjct: 299 SNK-------IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILK--IHSRKM 349
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
I L +A K +G +L+ + + + A R +H + FE + + +D
Sbjct: 350 NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKD 407
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 412 (150.1 bits), Expect = 2.6e-37, P = 2.6e-37
Identities = 117/324 (36%), Positives = 168/324 (51%)
Query: 744 SER-KAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEIL--VDRT-----VHAAVGR 795
+ER K +L + QR L +L + +Y E++ +D+ VH G+
Sbjct: 30 NERQKNLLRLQAQRNELNLKVRLLREELQLLQEQGSYIAEVVKPMDKNKVLVKVHPE-GK 88
Query: 796 YLHS-DSSFE-KHIKPT---LVRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGG 848
Y+ D + K + P+ +R++ S +H+ LP + + + S ++ VGG
Sbjct: 89 YVVDVDKTINIKDVTPSSRVALRNE-SYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGG 147
Query: 849 LTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFIS 908
L IKE+IELP K P +F + VLLYGPPG GKT + A A FI
Sbjct: 148 LDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIR 207
Query: 909 VKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD--RVVN 966
V G EL+ K+IG + VR++F A AP ++F DE DSI R TG ++ R +
Sbjct: 208 VSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSEVQRTML 267
Query: 967 QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVI 1024
+ L +LDG E + V AT+R D+LD ALLRPGR+DR + +FP P E RLDILK+
Sbjct: 268 ELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKI--EFPPPNEEARLDILKIH 325
Query: 1025 SRKLPLADDVDLEAIAHMTEGFSG 1048
SRK+ L ++L IA G SG
Sbjct: 326 SRKMNLTRGINLRKIAEEMPGASG 349
Score = 141 (54.7 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 57/237 (24%), Positives = 103/237 (43%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH + + V S L ++K G
Sbjct: 169 FDALGITQPKGVLLYGPPGTGKTLLARAVA----HHTECT--FIRVSGSEL-VQKFIGEG 221
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + L L++ +D + E
Sbjct: 222 SRMVRELFVM-AREHAPSIIFMDEIDSIGSARLETGTGDSEVQRTMLE--LLNQLDGF-E 277
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + Q+L GR D ++ P P R IL+ ++ +L
Sbjct: 278 ATKN------IKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNL 331
Query: 760 ECSDEILLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
L +A + G +++ + + ++A R +H + FE + +++D
Sbjct: 332 TRGIN-LRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKD 387
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 410 (149.4 bits), Expect = 4.3e-37, P = 4.3e-37
Identities = 108/273 (39%), Positives = 146/273 (53%)
Query: 789 VHAAVGRYLHS-DSSFE-KHIKPTL---VRDDFSQAMHEFLPVAMRDITKTSA--EGGRS 841
VH G+Y+ D S + + P+ +R+D S +H LP + + + S
Sbjct: 101 VHPE-GKYVVDIDKSIDITKLTPSTRVALRND-SYVLHLVLPSKVDPLVNLMKVEKVPDS 158
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
+D +GGL IKE+IELP K P +F + VLLYGPPG GKT + A A
Sbjct: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
FI V G EL+ KYIG + VR++F A AP ++F DE DSI R +G
Sbjct: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
Query: 962 D----RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE- 1016
D R + + L +LDG E + V AT+R D+LD ALLRPGR+DR + +FP+P E
Sbjct: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI--EFPNPNEE 336
Query: 1017 -RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R DILK+ SRK+ L +DL+ IA G SG
Sbjct: 337 SRFDILKIHSRKMNLMRGIDLKKIAEKMNGASG 369
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 61/238 (25%), Positives = 101/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 187 FESLGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKYIGEG 239
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + V L++ +D +
Sbjct: 240 SRMVRELFVM-AREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K I + + ++ + Q+L GR D ++ P P R IL+ I R +
Sbjct: 299 SNK-------IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILK--IHSRKM 349
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
I L +A K +G +L+ + + + A R +H + FE + + +D
Sbjct: 350 NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKD 407
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 410 (149.4 bits), Expect = 4.3e-37, P = 4.3e-37
Identities = 94/253 (37%), Positives = 140/253 (55%)
Query: 801 SSFEKHIKPTLVRDDFSQAMHEFLPVAMRDIT--KTSAEGGRSGWDDVGGLTDIQNAIKE 858
S +K ++ TL D + + LP + TS E G +D +GGLT+ ++E
Sbjct: 138 SKLKKGVRVTL--DITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELRE 195
Query: 859 MIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKY 918
+IELP K P IF + ++ VLLYGPPG GKT + A AA FI +++KY
Sbjct: 196 VIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKY 255
Query: 919 IGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT---DRVVNQFLTELDGV 975
IG S + +R++F+ A PC++F DE D+I +R + T R + + LT++DG
Sbjct: 256 IGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGF 315
Query: 976 EVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVD 1035
+ L + AT+RPD LD ALLRPGRLDR + P+ RL+I K+ + K+ + D
Sbjct: 316 DNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFD 375
Query: 1036 LEAIAHMTEGFSG 1048
EA M++GF+G
Sbjct: 376 FEAAVKMSDGFNG 388
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 405 (147.6 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 94/214 (43%), Positives = 123/214 (57%)
Query: 841 SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
S +D VGGL IKE+IELP K P +F + VLLYGPPG GKT + A A
Sbjct: 142 STYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 201
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 960
FI V G EL+ KYIG + VR++F A AP ++F DE DSI RG +G
Sbjct: 202 HTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGG 261
Query: 961 TD----RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 1016
D R + + L +LDG E + V T+R D+LD ALLRPGR+DR + +FP+P +
Sbjct: 262 GDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKI--EFPNPGD 319
Query: 1017 --RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ SRK+ L ++L+ I+ G SG
Sbjct: 320 AGRLDILKIHSRKMNLTRGINLKKISDKMNGASG 353
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 62/238 (26%), Positives = 104/238 (43%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 171 FESLGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKYIGEG 223
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R FI A +HAPSI+ D + V L++ +D + E
Sbjct: 224 SRMVRELFIM-AREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGF-E 281
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + ++ + +L GR D ++ P P + R IL+ I R +
Sbjct: 282 STKN------IKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILK--IHSRKM 333
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L ++ K +G +L+ + + ++A R +H S FE + + +D
Sbjct: 334 NLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKKD 391
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 122 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 180
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 181 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 240
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 241 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 300
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 301 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 358
Query: 1045 GFSG 1048
G SG
Sbjct: 359 GASG 362
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 181 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 233
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 234 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 290
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 291 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 342
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 343 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 400
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 116 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 234
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 235 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 294
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 295 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 352
Query: 1045 GFSG 1048
G SG
Sbjct: 353 GASG 356
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 227
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 228 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 284
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 285 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 336
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 116 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 234
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 235 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 294
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 295 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 352
Query: 1045 GFSG 1048
G SG
Sbjct: 353 GASG 356
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 227
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 228 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 284
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 285 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 336
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 116 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 234
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 235 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 294
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 295 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 352
Query: 1045 GFSG 1048
G SG
Sbjct: 353 GASG 356
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 227
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 228 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 284
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 285 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 336
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 116 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 234
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 235 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 294
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 295 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 352
Query: 1045 GFSG 1048
G SG
Sbjct: 353 GASG 356
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 227
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 228 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 284
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 285 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 336
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 124 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 182
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 183 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 242
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 243 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 302
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 303 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 360
Query: 1045 GFSG 1048
G SG
Sbjct: 361 GASG 364
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 183 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 235
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 236 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 292
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 293 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 344
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 345 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 402
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 124 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 182
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 183 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 242
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 243 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 302
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 303 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 360
Query: 1045 GFSG 1048
G SG
Sbjct: 361 GASG 364
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 183 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 235
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 236 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 292
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 293 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 344
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 345 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 402
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 116 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 234
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 235 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 294
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 295 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 352
Query: 1045 GFSG 1048
G SG
Sbjct: 353 GASG 356
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 227
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 228 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 284
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 285 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 336
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 116 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 234
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 235 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 294
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 295 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 352
Query: 1045 GFSG 1048
G SG
Sbjct: 353 GASG 356
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 227
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 228 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 284
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 285 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 336
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 404 (147.3 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 98/244 (40%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P +
Sbjct: 116 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 174
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 234
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R G R + + L +LDG E + V A
Sbjct: 235 FVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 294
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA +
Sbjct: 295 TNRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMP 352
Query: 1045 GFSG 1048
G SG
Sbjct: 353 GASG 356
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 175 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 227
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 228 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLE-LLNQLDGF-E 284
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 285 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 336
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 337 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 403 (146.9 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 80/217 (36%), Positives = 128/217 (58%)
Query: 834 TSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTH 893
T+ G + ++GGL++ ++E++ELP P +F + ++ VLLYGPPG GKT
Sbjct: 127 TAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTL 186
Query: 894 IVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR 953
+ A A+ F+ V +++KYIG S + +R++F A PC++F DE D+I +R
Sbjct: 187 LARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRR 246
Query: 954 GHDNTGVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCD 1010
+ T R + + L ++DG + L+ V + AT+RPD+LD ALLRPGRLDR +
Sbjct: 247 FSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIP 306
Query: 1011 FPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFS 1047
P+ R+D+LK+ + + DVD EAIA + +GF+
Sbjct: 307 LPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFN 343
Score = 126 (49.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 45/193 (23%), Positives = 83/193 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L++GPPG+GKT LA+A+A +LE + V V + E +IR+
Sbjct: 171 PKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIV--DKYIGESARVIRE----MFG 224
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A DH P ++ D + L + L++ MD + K
Sbjct: 225 YARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLME-LLNQMDGFDTLSK------- 276
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L GR D +++P P + R +L+ I ++ ++ +
Sbjct: 277 VKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLK--IHAANITKHGDVDYEA 334
Query: 770 ASK-CDGYDAYDL 781
+K DG++A DL
Sbjct: 335 IAKLADGFNAADL 347
Score = 50 (22.7 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 34/165 (20%), Positives = 70/165 (42%)
Query: 24 ETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVARQFAECISLAD--HT 81
+T + ++ + +++ LRS +R++V A + ++ C + D H
Sbjct: 45 KTEDHIKTIQYIGEIIGEVLRSLDEERFIVK---ACNGPRYV------VRCANYQDKAHL 95
Query: 82 IVQ-VRVVSNVLKATLVTIEPLTEDDWEVLELNSE------HAE-AAILNQVRIVHEAMR 133
+V RV ++ T++ I P E D + + +E + E + NQ+R + E +
Sbjct: 96 LVPGARVTLDLTTLTILKILP-REVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVE 154
Query: 134 FPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVK 178
PL + I V PK ++ PGT + + +N++
Sbjct: 155 LPLMIPELFI---RVGIKAPKGVLLYGPPGTGKTLLARAIASNLE 196
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 417 (151.9 bits), Expect = 4.7e-36, P = 4.7e-36
Identities = 86/209 (41%), Positives = 124/209 (59%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+DDV G+ + + ++E++ K P F ++ VLL GPPG GKT + A A
Sbjct: 171 FDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ F S+ G E + ++G VRD+F KA APCL+F DE D++ +RG G D
Sbjct: 230 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGND 289
Query: 963 ---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
+ +NQ LTE+DG E TG+ + AAT+RPD+LD+AL+RPGR DR + D P R +
Sbjct: 290 EREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKE 349
Query: 1020 ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
IL+V +R LA +V +++IA T GFSG
Sbjct: 350 ILEVHARNKKLAPEVSIDSIARRTPGFSG 378
Score = 135 (52.6 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 51/206 (24%), Positives = 91/206 (44%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F+ +P +L+ GPPG+GKT LAKA+A ++ FV + + G
Sbjct: 197 FTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV---EMFVGVGA--- 250
Query: 642 QALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKR 701
+ + +A ++AP ++ D + L + L + MD +
Sbjct: 251 SRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTE-MDGF---- 305
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+ + GI +A+ + + +L GRFD V + AP S RK ILE + R+ +
Sbjct: 306 EGNTGI---IIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILE--VHARNKKL 360
Query: 762 SDEILLD-VASKCDGYDAYDLEILVD 786
+ E+ +D +A + G+ DL L++
Sbjct: 361 APEVSIDSIARRTPGFSGADLANLLN 386
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 391 (142.7 bits), Expect = 4.8e-36, Sum P(2) = 4.8e-36
Identities = 82/213 (38%), Positives = 124/213 (58%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + VGGL D ++E IELP P +F + ++ VLLYGPPG GKT + A
Sbjct: 134 GNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 193
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 194 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 253
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L +LDG + L V + AT+RPD+LD ALLRPGRLDR + P+ +
Sbjct: 254 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R++ILK+ + + ++D EAI + EGF+G
Sbjct: 314 SRMEILKIHASGIAKHGEIDYEAIVKLGEGFNG 346
Score = 123 (48.4 bits), Expect = 0.00044, P = 0.00044
Identities = 49/230 (21%), Positives = 101/230 (43%)
Query: 554 SSLSWMGTTASDVINRIKV-LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAK 612
S++ +G ++ I++ L++P+ F + P +L++GPPG+GKT LA+A+A
Sbjct: 139 SAVGGLGDQIRELRESIELPLMNPEL---FLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 613 SLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXX 672
+++ + V + + E +IR+ + N+ A +H P I+ D +
Sbjct: 196 NIDANFLKVVSSAII--DKYIGESARLIRE-MFNY---AREHQPCIIFMDEIDAIGGRRF 249
Query: 673 XXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRF 732
L + L++ +D + + +G + + + + + +L GR
Sbjct: 250 SEGTSADREIQRTLME-LLNQLDGFDQ-------LGKVKMIMATNRPDVLDPALLRPGRL 301
Query: 733 DFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKC-DGYDAYDL 781
D +++P P R IL+ I + EI + K +G++ DL
Sbjct: 302 DRKIEIPLPNEQSRMEILK--IHASGIAKHGEIDYEAIVKLGEGFNGADL 349
Score = 37 (18.1 bits), Expect = 4.8e-36, Sum P(2) = 4.8e-36
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 603 KTSLAKAVAKSLEHHKDLVAHI 624
+T+ K L HHK+L + +
Sbjct: 11 RTAAVTDYRKKLLHHKELESRV 32
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 400 (145.9 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 81/213 (38%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 128 GSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + + P+ +
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQ 307
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ S + D+D EAI +++GF+G
Sbjct: 308 ARLDILKIHSGPITKHGDIDYEAIVKLSDGFNG 340
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 378 (138.1 bits), Expect = 6.4e-36, Sum P(2) = 6.4e-36
Identities = 82/207 (39%), Positives = 116/207 (56%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
D+GG+ + I+E +ELP ++ Q + VL+YGPPGCGKT + A A +
Sbjct: 161 DIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTA 220
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---T 961
FI V G E + KY+G + VRD+F A AP ++F DE D+IA KR TG
Sbjct: 221 SFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 280
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R++ + L ++DG + T V V AT+R D LD ALLRPGRLDR + P R++ +
Sbjct: 281 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 340
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSG 1048
I+ K+ L++DVDLE + SG
Sbjct: 341 STITSKMNLSEDVDLEEFVARPDKISG 367
Score = 132 (51.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 55/239 (23%), Positives = 97/239 (40%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS---LEKGPIIRQALSN 646
P +L++GPPG GKT LAKAVA HH A + V S L +GP + + +
Sbjct: 194 PRGVLMYGPPGCGKTMLAKAVA----HHT--TASFIRVVGSEFVQKYLGEGP---RMVRD 244
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
A ++AP+I+ D + L + L++ MD + +
Sbjct: 245 VFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQTTN---- 299
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEIL 766
+ + + + + +L GR D ++ P P +++ + + +L D L
Sbjct: 300 ---VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLS-EDVDL 355
Query: 767 LDVASKCDGYDAYDLEILVDRT-VHAA-VGRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
+ ++ D D+ + +HA RY+ FEK K + +D+ HEF
Sbjct: 356 EEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKNNIKKDEQE---HEF 411
Score = 49 (22.3 bits), Expect = 6.4e-36, Sum P(2) = 6.4e-36
Identities = 30/126 (23%), Positives = 50/126 (39%)
Query: 171 KRRKNNVKKHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELG----VALTSV 226
K + N+KK Y+ A E I L + E + + G G V + S
Sbjct: 57 KDEQRNLKKE---YLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILST 113
Query: 227 A---FINPETAENVSLCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKK 283
+ P + + S LV +LP +++ P K +++ +I GG K+
Sbjct: 114 IDRELLKPSASVALHKHSNALVDVLP--PEADSSISMLQPDEKPDVSYADI-GGMDMQKQ 170
Query: 284 ECRQAV 289
E R+AV
Sbjct: 171 EIREAV 176
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 399 (145.5 bits), Expect = 6.5e-36, P = 6.5e-36
Identities = 97/239 (40%), Positives = 130/239 (54%)
Query: 817 SQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
S +H+ LP + + + S ++ VGGL IKE+IELP K P +F
Sbjct: 119 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALG 178
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++F A
Sbjct: 179 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 238
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE DSI R +G R + + L +LDG E + V AT+R D
Sbjct: 239 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 298
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+LD ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA + G SG
Sbjct: 299 ILDPALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASG 355
Score = 132 (51.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 57/238 (23%), Positives = 102/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH + + V S L ++K G
Sbjct: 174 FDALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTECT--FIRVSGSEL-VQKFIGEG 226
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 227 SRMVRELFVM-AREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLE-LLNQLDGF-E 283
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ I R +
Sbjct: 284 ATKN------IKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILK--IHSRKM 335
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ I L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 336 NLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 393
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 134 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 193
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 194 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 253
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 254 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 313
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 314 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 346
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 142 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 201
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 202 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 261
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 262 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 321
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 322 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 354
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 120 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 179
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 180 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 239
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 240 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 299
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 300 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 332
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 398 (145.2 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 142 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 201
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 202 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 261
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 262 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 321
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 322 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 354
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 396 (144.5 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 97/243 (39%), Positives = 133/243 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R+D S +H+ LP + + + S ++ +GGL IKE+IELP K P
Sbjct: 111 LRND-SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEH 169
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 170 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL 229
Query: 930 FSKATAAAPCLLFFDEFDSIAPKR--GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
F A AP ++F DE DSI + G R + + L +LDG E + V AT
Sbjct: 230 FVMAREHAPSIIFMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT 289
Query: 988 SRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTEG 1045
+R D+LD+ALLRPGR+DR + +FP P E RLDILK+ SRK+ L ++L IA + G
Sbjct: 290 NRIDILDSALLRPGRIDRKI--EFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 347
Query: 1046 FSG 1048
SG
Sbjct: 348 ASG 350
Score = 131 (51.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 57/237 (24%), Positives = 100/237 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 170 FEALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKFIGEG 222
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + L L++ +D + E
Sbjct: 223 ARMVRELFVM-AREHAPSIIFMDEIDSIGSRLEGGSGGDSEVQRTMLE--LLNQLDGF-E 278
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P R IL+ ++ +L
Sbjct: 279 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNL 332
Query: 760 ECSDEILLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
L +A G +++ + + ++A R +H + FE + + +D
Sbjct: 333 TRGIN-LRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 388
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 396 (144.5 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 83/213 (38%), Positives = 124/213 (58%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + VGGL D ++E IELP P +F + ++ VLLYGPPG GKT + A
Sbjct: 134 GNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 193
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 194 ASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT 253
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L +LDG + L V + AT+RPD+LD ALLRPGRLDR + P+ +
Sbjct: 254 SADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R+DILK+ + + ++D EAI + EGF+G
Sbjct: 314 SRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNG 346
Score = 121 (47.7 bits), Expect = 0.00073, P = 0.00073
Identities = 49/230 (21%), Positives = 100/230 (43%)
Query: 554 SSLSWMGTTASDVINRIKV-LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAK 612
S++ +G ++ I++ L++P+ F + P +L++GPPG+GKT LA+A+A
Sbjct: 139 SAVGGLGDQIRELRESIELPLMNPEL---FLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 613 SLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXX 672
+++ + V + + E +IR+ + N+ A +H P I+ D +
Sbjct: 196 NIDANFLKVVSSAII--DKYIGESARLIRE-MFNY---AREHQPCIIFMDEIDAIGGRRF 249
Query: 673 XXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRF 732
L + L++ +D + +G + + + + + +L GR
Sbjct: 250 SEGTSADREIQRTLME-LLNQLDGFDN-------LGKVKMIMATNRPDVLDPALLRPGRL 301
Query: 733 DFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASK-CDGYDAYDL 781
D +++P P R IL+ I + EI + K +G++ DL
Sbjct: 302 DRKIEIPLPNEQSRMDILK--IHAAGIAKHGEIDYEAIVKLAEGFNGADL 349
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 396 (144.5 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 142 GDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 201
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 202 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 261
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 262 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 321
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 322 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 354
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 396 (144.5 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + ++GGL++ ++E+IELP P +F + + LLYGPPG GKT + A
Sbjct: 128 GDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + D P+ +
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RLDILK+ + + ++D EAI +++GF+G
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 396 (144.5 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 84/221 (38%), Positives = 128/221 (57%)
Query: 831 ITKTSAEG-GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGC 889
+ K S E G + DVGGL + ++E++ELP P +F + + LL+GPPG
Sbjct: 136 VYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGT 195
Query: 890 GKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSI 949
GKT + A A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I
Sbjct: 196 GKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAI 255
Query: 950 APKRGHDNTGVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRL 1006
+R + T R + + L +LDG + L V V AT+RPD LD ALLRPGRLDR
Sbjct: 256 GGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRK 315
Query: 1007 LFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFS 1047
+ P+ + RL+ILK+ S K+ ++D EA+ +++GFS
Sbjct: 316 IEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFS 356
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 396 (144.5 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 84/221 (38%), Positives = 128/221 (57%)
Query: 831 ITKTSAEG-GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGC 889
+ K S E G + DVGGL + ++E++ELP P +F + + LL+GPPG
Sbjct: 136 VYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGT 195
Query: 890 GKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSI 949
GKT + A A+ F+ V +++KYIG S + +R++F+ A PC++F DE D+I
Sbjct: 196 GKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAI 255
Query: 950 APKRGHDNTGVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRL 1006
+R + T R + + L +LDG + L V V AT+RPD LD ALLRPGRLDR
Sbjct: 256 GGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRK 315
Query: 1007 LFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFS 1047
+ P+ + RL+ILK+ S K+ ++D EA+ +++GFS
Sbjct: 316 IEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFS 356
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 382 (139.5 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 87/210 (41%), Positives = 120/210 (57%)
Query: 843 WDDVGGLTDIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
+ D+GG DIQ ++E +ELP N++ Q + VLLYGPPG GKT + A A
Sbjct: 149 YSDIGG-GDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV- 960
S FI V G E + KY+G + VRD+F A +P ++F DE D+IA KR TG
Sbjct: 208 TSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGAD 267
Query: 961 --TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R++ + L ++DG +V V V AT+R D LD ALLRPGRLDR + P R++
Sbjct: 268 REVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKR 327
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
I +VI+ K+ L+D+VDLE + SG
Sbjct: 328 LIFQVITSKMNLSDEVDLEDYVSRPDKLSG 357
Score = 131 (51.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 55/230 (23%), Positives = 101/230 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS--LEKGPIIRQALSNF 647
P +L++GPPG+GKT LAKAVA HH A I V + L +GP + + +
Sbjct: 184 PRGVLLYGPPGTGKTMLAKAVA----HHTS-AAFIRVVGSEFVQKYLGEGP---RLVRDV 235
Query: 648 ISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGI 707
A +++P+I+ D + L + L++ MD + +
Sbjct: 236 FRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILME-LLNQMDGF------DVSV 288
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
+ + + + + +L GR D ++ P P +++ I + + +L SDE+ L
Sbjct: 289 N-VKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNL--SDEVDL 345
Query: 767 LDVASKCDGYDAYDLE-ILVDRTVHAA-VGRYLHSDSSFEKHIKPTLVRD 814
D S+ D +++ I + +HA RY+ FEK K ++ ++
Sbjct: 346 EDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEKGYKASIKKN 395
Score = 41 (19.5 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 29/125 (23%), Positives = 50/125 (40%)
Query: 171 KRRKNNVKK---HEDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVA 227
K N+K+ H ++ + LL + DS+ G+ + G L V + S
Sbjct: 47 KYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDSNTGIVQ--STSGSTLCVRILSTI 104
Query: 228 ---FINPETAENVSLCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKE 284
+ P + + S LV LP S +++ K + + +I GG K+E
Sbjct: 105 DRELLKPSASVALQRHSNALVDTLPPES--DSSIHLLGADEKPSESYSDIGGG-DIQKQE 161
Query: 285 CRQAV 289
R+AV
Sbjct: 162 MREAV 166
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 394 (143.8 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 98/253 (38%), Positives = 136/253 (53%)
Query: 805 KHIKPTL---VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEM 859
K IKP + +R+D Q + + LP + + + S ++ VGGL IKE+
Sbjct: 102 KEIKPNIRVALRNDSYQLI-KILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEV 160
Query: 860 IELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYI 919
IELP K P +F + +LLYGPPG GKT + A A +FI V G EL+ KYI
Sbjct: 161 IELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYI 220
Query: 920 GASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD----RVVNQFLTELDGV 975
G + VR++F A AP ++F DE DSI R + G D R + + L +LDG
Sbjct: 221 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGF 280
Query: 976 EVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVD 1035
E + V AT+R D+LD ALLRPGR+DR + PS R +IL++ SR + L +D
Sbjct: 281 EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGID 340
Query: 1036 LEAIAHMTEGFSG 1048
L++IA G SG
Sbjct: 341 LKSIAEKMNGASG 353
Score = 175 (66.7 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 66/239 (27%), Positives = 106/239 (44%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + +P P IL++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 171 FESLGIPQPKGILLYGPPGTGKTLLARAVA----HHTD--CKFIRVSGSEL-VQKYIGEG 223
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + V L++ +D + E
Sbjct: 224 SRMVRELFVM-AREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGF-E 281
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ P P+A R IL I RS+
Sbjct: 282 ATKN------IKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILR--IHSRSM 333
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRDD 815
+ I L +A K +G +L+ + + + A R +H + FE + L + D
Sbjct: 334 NLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKGD 392
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 394 (143.8 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 78/222 (35%), Positives = 130/222 (58%)
Query: 830 DITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGC 889
DI K+ + ++ +GGL++ ++E++ELP P ++ + ++ VLLYGPPG
Sbjct: 123 DIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGT 182
Query: 890 GKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSI 949
GKT + A A+ + F+ + +++KYIG S + +R++F+ A PC++F DE D+I
Sbjct: 183 GKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAI 242
Query: 950 APKRGHDNTGVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRL 1006
+R T R + + L LDG E L V + AT+RPD+LD AL+RPGRLDR
Sbjct: 243 GGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRK 302
Query: 1007 LFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+ P+ R++ILK+ + K+ D+D E++ + +GF+G
Sbjct: 303 IEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNG 344
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/192 (23%), Positives = 85/192 (44%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L++GPPG+GKT LA+A+A ++ + + + +V + E IIR+ + N+
Sbjct: 171 PKGVLLYGPPGTGKTLLARAMASNI--NCNFMRIVVSAIVDKYIGESARIIRE-MFNYAK 227
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
E H P I+ D + L + L++ +D + E +G
Sbjct: 228 E---HQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLME-LLNHLDGFEE-------LGN 276
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L GR D +++P P + R IL+ + + + D V
Sbjct: 277 VKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMT-KLGDIDYESV 335
Query: 770 ASKCDGYDAYDL 781
CDG++ DL
Sbjct: 336 CRLCDGFNGADL 347
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 394 (143.8 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 78/222 (35%), Positives = 130/222 (58%)
Query: 830 DITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGC 889
DI K+ + ++ +GGL++ ++E++ELP P ++ + ++ VLLYGPPG
Sbjct: 123 DIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGT 182
Query: 890 GKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSI 949
GKT + A A+ + F+ + +++KYIG S + +R++F+ A PC++F DE D+I
Sbjct: 183 GKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAI 242
Query: 950 APKRGHDNTGVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRL 1006
+R T R + + L LDG E L V + AT+RPD+LD AL+RPGRLDR
Sbjct: 243 GGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRK 302
Query: 1007 LFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+ P+ R++ILK+ + K+ D+D E++ + +GF+G
Sbjct: 303 IEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNG 344
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/192 (23%), Positives = 85/192 (44%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L++GPPG+GKT LA+A+A ++ + + + +V + E IIR+ + N+
Sbjct: 171 PKGVLLYGPPGTGKTLLARAMASNI--NCNFMRIVVSAIVDKYIGESARIIRE-MFNYAK 227
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
E H P I+ D + L + L++ +D + E +G
Sbjct: 228 E---HQPCIIFMDEIDAIGGRRFSQGTSADREIQRTLME-LLNHLDGFEE-------LGN 276
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L GR D +++P P + R IL+ + + + D V
Sbjct: 277 VKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIHANKMT-KLGDIDYESV 335
Query: 770 ASKCDGYDAYDL 781
CDG++ DL
Sbjct: 336 CRLCDGFNGADL 347
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 380 (138.8 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 87/210 (41%), Positives = 123/210 (58%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
DVGGL + I+E +ELP +++ Q + VLLYGPPG GKT +V A A + +
Sbjct: 167 DVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTA 226
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---T 961
FI V G E + KY+G + VRD+F A +P ++F DE D+IA KR TG
Sbjct: 227 SFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREV 286
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD-- 1019
R++ + L ++DG E + V V AT+R D LD ALLRPGRLDR + +FPS R+R +
Sbjct: 287 QRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKI--EFPSLRDRRERR 344
Query: 1020 -ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
I I+ K+ L+ +VDL+++ E SG
Sbjct: 345 LIFSTIASKMSLSPEVDLDSLIVRNEPLSG 374
Score = 41 (19.5 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 229 INPETAENVSLCSLELVAILPRL--SSKENNPENNAPRIKSNLTSKEISGGASTDKKECR 286
+ P ++ + S LV ILP SS EN P ++T ++ GG K+E R
Sbjct: 125 LKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKP----DVTYADV-GGLDMQKQEIR 179
Query: 287 QAV 289
+AV
Sbjct: 180 EAV 182
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 393 (143.4 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 82/218 (37%), Positives = 125/218 (57%)
Query: 834 TSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTH 893
T+ E G ++ +GGLT+ ++E+IELP K P +F + ++ VLLYGPPG GKT
Sbjct: 162 TTFEPGEISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTL 221
Query: 894 IVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR 953
+ A AA FI +++KYIG S + +R++F+ A PC++F DE D+I +R
Sbjct: 222 LAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRR 281
Query: 954 GHDNTGVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCD 1010
+ T R + + L ++DG + L + AT+RPD LD ALLR GRLDR +
Sbjct: 282 FSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIG 341
Query: 1011 FPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P+ RL+I K+ + K+ + D EA M++GF+G
Sbjct: 342 LPNEAGRLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNG 379
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 413 (150.4 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 90/209 (43%), Positives = 120/209 (57%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+DDV G+ + + E++E K P F ++ VLL GPPG GKT + A A
Sbjct: 226 FDDVAGVDEAKQDFMEVVEFLKK-PERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEA 284
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ F S+ G E + ++G VRD+F KA APC++F DE D++ +RG G D
Sbjct: 285 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 344
Query: 963 ---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
+ +NQ LTE+DG E TGV V AAT+R D+LD+ALLRPGR DR + D P + R D
Sbjct: 345 EREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTD 404
Query: 1020 ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
ILKV + +DV LE IA T GFSG
Sbjct: 405 ILKVHAGNKKFDNDVSLEIIAMRTPGFSG 433
Score = 47 (21.6 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 22/102 (21%), Positives = 41/102 (40%)
Query: 470 NGALENKTKARELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKL 529
NG N T + L T + K N + +L+ + +Q + ++ L G
Sbjct: 11 NGLSVNTTTKQRLSKHFSGRQTSFSSVIRTSKVNVVKASLDGKKKQEGRRDFLKILLG-- 68
Query: 530 NSGDSVSFYTVKERGSTQGFDSNVSSLS-WMGTTASDVINRI 570
N+G + + K QG S+ S S ++ D +N++
Sbjct: 69 NAGVGL-VASGKANADEQGVSSSRMSYSRFLEYLDKDRVNKV 109
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 410 (149.4 bits), Expect = 3.3e-35, P = 3.3e-35
Identities = 94/261 (36%), Positives = 137/261 (52%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
DV G + + + E++E K P FA+ R+ VLL GPPG GKT + A A +
Sbjct: 163 DVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGV 221
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD-- 962
F S+ G + + ++G VRD+F A APC++F DE D++ +RG G D
Sbjct: 222 PFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDER 281
Query: 963 -RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
+ +NQ L E+DG G+ + AAT+RPD+LD ALLRPGR DR + D P R +L
Sbjct: 282 EQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVL 341
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVI 1081
KV +R PL ++++L AIA T GFSG + ID ++ +
Sbjct: 342 KVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSD---IDEA 398
Query: 1082 TDALLKSIASKARPSVSEAEK 1102
TD ++ A K+R +SE E+
Sbjct: 399 TDRVIAGPAKKSRV-ISEKER 418
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 383 (139.9 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 94/240 (39%), Positives = 132/240 (55%)
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSG--WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
S A+ + LP E + + DVGGL + I+E +ELP +++ Q
Sbjct: 143 SNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIG 202
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VLLYGPPG GKT +V A A + FI V G E ++KY+G + VRD+F A
Sbjct: 203 IDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLAR 262
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE DSIA KR TG R++ + LT++DG + T V V AT+R D
Sbjct: 263 ENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRAD 322
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD---ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD ALLRPGRLDR + +FPS R+R + I I+ K+ LA + DL+++ + SG
Sbjct: 323 TLDPALLRPGRLDRKI--EFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSG 380
Score = 37 (18.1 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 6/27 (22%), Positives = 14/27 (51%)
Query: 461 TYGKVPASCNGALENKTKARELRTEIF 487
+Y + A NG + N + + ++I+
Sbjct: 22 SYASLLAQLNGTVNNNSALSNVNSDIY 48
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 413 (150.4 bits), Expect = 3.6e-35, P = 3.6e-35
Identities = 108/338 (31%), Positives = 176/338 (52%)
Query: 722 IPQSLTSSGRFDF--HVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAY 779
+P SL R F V + P+ +R+ ++EH + L S +L +A GY
Sbjct: 358 VPDSLHEHARRRFVREVTINMPSEGQRRQLVEHLCEVHELNISQTLLEHIARNTQGYVIA 417
Query: 780 DLEILVDRTVHAAVGRYLHSDSSFE-KHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEG 838
DL +L+ R V + L + F+ +HI F +++ + P A R T
Sbjct: 418 DLTLLLRR-----VQQQLLTKDDFDIEHI--------FLKSLSQTQPSASRS-TDVRVSK 463
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
+G++ +GG+ ++ ++ + + FA+ L L VLLYGPPGC KT +
Sbjct: 464 MTAGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCL 523
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A + FI+ E+ + Y+G +E+ + IF A APCL+F DE DS+ +R +
Sbjct: 524 AKEADMTFIATSAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSG 583
Query: 959 G----VTDRVVNQFLTELDGVEVLTG----VFVFAATSRPDLLDAALLRPGRLDRLLFCD 1010
G V R+++ LTE++G+ V G + V AAT+RPD++D ALLRPGR D+L+
Sbjct: 584 GGGGQVQLRILSTLLTEMNGI-VGGGSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVP 642
Query: 1011 FPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P + RL +LK+ S+++P ++V L+ IA T+ +SG
Sbjct: 643 APDEKSRLALLKLHSQRMPFHENVFLQEIAARTDRYSG 680
Score = 146 (56.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 55/218 (25%), Positives = 90/218 (41%)
Query: 569 RIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVC 628
++ VL F+ + L LP +L++GPPG KT++AK +AK A + F+
Sbjct: 482 QVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKE--------ADMTFIA 533
Query: 629 CSRLSLEKGPIIRQALSNFISEALD----HAPSIVIFDNLXXXXXXXXXXXXXXXXXXVI 684
S + P + A FIS D +AP ++ D + +
Sbjct: 534 TSAAEVYS-PYVGCA-ERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQL 591
Query: 685 A-LTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAA 743
L+ L ++ G + I VA+ + I +L GRFD + +PAP
Sbjct: 592 RILSTLLTEMNGIVGGGSQQH-----ILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDE 646
Query: 744 SERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDL 781
R A+L+ QR + L ++A++ D Y DL
Sbjct: 647 KSRLALLKLHSQRMPFH-ENVFLQEIAARTDRYSGADL 683
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 392 (143.0 bits), Expect = 3.6e-35, P = 3.6e-35
Identities = 80/213 (37%), Positives = 124/213 (58%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G+ + +GGL D ++E+IELP K P +F + ++ VLLYGPPG GKT + A
Sbjct: 132 GQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAV 191
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A++ F+ V +++KYIG S + +R++F A PC++F DE D+I +R + T
Sbjct: 192 ASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGT 251
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L +LDG + L + AT+RPD LD ALLR GRLDR + P+
Sbjct: 252 SADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEV 311
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
RL+ILK+ S + + D+D E++ M++G +G
Sbjct: 312 GRLEILKIHSSTVQMEGDIDFESVVKMSDGLNG 344
Score = 122 (48.0 bits), Expect = 0.00055, P = 0.00055
Identities = 49/208 (23%), Positives = 86/208 (41%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L++GPPG+GKT LA+AVA S+E + V V + E +IR+
Sbjct: 171 PKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIV--DKYIGESARLIRE----MFG 224
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A +H P I+ D + L + L++ +D + +G
Sbjct: 225 YAKEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME-LLNQLDGFDY-------LGK 276
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 768
+ + + + +L +GR D +++P P R IL+ I +++ +I +
Sbjct: 277 TKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLEILK--IHSSTVQMEGDIDFES 334
Query: 769 VASKCDGYDAYDLEILVDRTVHAAVGRY 796
V DG + DL +V A+ Y
Sbjct: 335 VVKMSDGLNGADLRNVVTEAGLFAIKDY 362
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 407 (148.3 bits), Expect = 5.2e-35, P = 5.2e-35
Identities = 91/218 (41%), Positives = 126/218 (57%)
Query: 834 TSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTH 893
T A+G R ++DV G+ + + ++E+I+ K P F + R+ VLL GPPG GKT
Sbjct: 144 TEAQG-RVTFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGPPGTGKTL 201
Query: 894 IVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR 953
+ A A + F S+ G + + ++G VRD+F + APC++F DE D++ R
Sbjct: 202 LARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHR 261
Query: 954 GHDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCD 1010
G G D + +NQ L E+DG E GV + AAT+RPD+LD ALLRPGR DR +
Sbjct: 262 GAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVP 321
Query: 1011 FPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P + R ILKV ++K PLA DVDL IA T GFSG
Sbjct: 322 QPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSG 359
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 390 (142.3 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 79/213 (37%), Positives = 124/213 (58%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G + VGGL+D ++E IELP P +F + ++ VLLYGPPG GKT + A
Sbjct: 135 GNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 194
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A+ F+ + +++KYIG S + +R++F A PC++F DE D+I +R + T
Sbjct: 195 ASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 254
Query: 959 GVT---DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
R + + L +LDG + L V + AT+RPD+LD ALLRPGRLDR + P+ +
Sbjct: 255 SADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 314
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R+++LK+ + + ++D EA+ + EGF+G
Sbjct: 315 ARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNG 347
Score = 125 (49.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 44/205 (21%), Positives = 85/205 (41%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L++GPPG+GKT LA+A+A +++ + + + + E +IR+
Sbjct: 174 PKGVLLYGPPGTGKTLLARAIASNID--ANFLKIVSSAIIDKYIGESARLIRE----MFG 227
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A DH P I+ D + L + L++ +D + E +G
Sbjct: 228 YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME-LLNQLDGFDE-------LGK 279
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L GR D +++P P R +L+ I + EI +
Sbjct: 280 VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLK--IHAAGIAKHGEIDYEA 337
Query: 770 ASK-CDGYDAYDLEILVDRTVHAAV 793
K +G++ DL + AA+
Sbjct: 338 VVKLAEGFNGADLRNVCTEAGMAAI 362
Score = 65 (27.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 41/182 (22%), Positives = 77/182 (42%)
Query: 2 ELEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSS 61
ELE RV EN + +T + +S + Q++ LR N+R++V A+S
Sbjct: 28 ELESRVSTVREN-LKNAKKDFTKTEDDLKSLQSVGQIIGEVLRPLDNERFIVK---ASSG 83
Query: 62 SSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVT-IEP-----LTEDDWEVLELNSE 115
++ R + L T V + + + + TL ++P L ED V S
Sbjct: 84 PRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNV----SY 139
Query: 116 HAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKN 175
A + +Q+R + E++ PL ++ + + PK ++ PGT + + +
Sbjct: 140 SAVGGLSDQIRELRESIELPL-MNPELFLRVGIKP--PKGVLLYGPPGTGKTLLARAIAS 196
Query: 176 NV 177
N+
Sbjct: 197 NI 198
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 390 (142.3 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 109/311 (35%), Positives = 157/311 (50%)
Query: 752 HEIQRRSLECSDEI--LLDVAS------KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSF 803
+E+ R E DEI LL+ AS K G + ++I + + R+++ S
Sbjct: 80 NELNARVRELCDEIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDIARHINI-SHC 138
Query: 804 EKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIE 861
+ + L D + +H+ LP + + + S ++ VGGL +KE+IE
Sbjct: 139 TPNTRVALYNDSYK--LHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIE 196
Query: 862 LPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGA 921
LP K P IF + VLLYGPPG GKT + A A FI V G EL+ KYIG
Sbjct: 197 LPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 256
Query: 922 SEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR--GHDNTGVTDRVVNQFLTELDGVEVLT 979
+ VR++F A AP ++F DE DSI +R G R + + L +LDG E
Sbjct: 257 GSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQ 316
Query: 980 GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR--ERLDILKVISRKLPLADDVDLE 1037
+ V T+R D+LD ALLRPGR+DR + +FP+P R++ILK+ SRK+ L +D+
Sbjct: 317 NIKVIMCTNRIDILDEALLRPGRIDRKI--EFPNPNVEARMEILKIHSRKMNLMRGIDML 374
Query: 1038 AIAHMTEGFSG 1048
IA SG
Sbjct: 375 KIATDMNNCSG 385
Score = 126 (49.4 bits), Expect = 0.00024, P = 0.00024
Identities = 54/237 (22%), Positives = 103/237 (43%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 205 FESLGISQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKYIGEG 257
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + L++ +D + E
Sbjct: 258 SRMVRELFVM-AREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMME--LLNQLDGF-E 313
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
++ I + ++ + ++L GR D ++ P P R IL+ ++ +L
Sbjct: 314 STQN------IKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNL 367
Query: 760 ECSDEILLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ +L +A+ + +++ + + + A R +H + FE + + +D
Sbjct: 368 MRGID-MLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQD 423
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 390 (142.3 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 109/311 (35%), Positives = 157/311 (50%)
Query: 752 HEIQRRSLECSDEI--LLDVAS------KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSF 803
+E+ R E DEI LL+ AS K G + ++I + + R+++ S
Sbjct: 80 NELNARVRELCDEIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDIARHINI-SHC 138
Query: 804 EKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIE 861
+ + L D + +H+ LP + + + S ++ VGGL +KE+IE
Sbjct: 139 TPNTRVALYNDSYK--LHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIE 196
Query: 862 LPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGA 921
LP K P IF + VLLYGPPG GKT + A A FI V G EL+ KYIG
Sbjct: 197 LPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 256
Query: 922 SEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR--GHDNTGVTDRVVNQFLTELDGVEVLT 979
+ VR++F A AP ++F DE DSI +R G R + + L +LDG E
Sbjct: 257 GSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQ 316
Query: 980 GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR--ERLDILKVISRKLPLADDVDLE 1037
+ V T+R D+LD ALLRPGR+DR + +FP+P R++ILK+ SRK+ L +D+
Sbjct: 317 NIKVIMCTNRIDILDEALLRPGRIDRKI--EFPNPNVEARMEILKIHSRKMNLMRGIDML 374
Query: 1038 AIAHMTEGFSG 1048
IA SG
Sbjct: 375 KIATDMNNCSG 385
Score = 126 (49.4 bits), Expect = 0.00024, P = 0.00024
Identities = 54/237 (22%), Positives = 103/237 (43%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 205 FESLGISQPKGVLLYGPPGTGKTLLARAVA----HHTDCT--FIRVSGSEL-VQKYIGEG 257
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + L++ +D + E
Sbjct: 258 SRMVRELFVM-AREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMME--LLNQLDGF-E 313
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
++ I + ++ + ++L GR D ++ P P R IL+ ++ +L
Sbjct: 314 STQN------IKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNL 367
Query: 760 ECSDEILLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
+ +L +A+ + +++ + + + A R +H + FE + + +D
Sbjct: 368 MRGID-MLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQD 423
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 373 (136.4 bits), Expect = 7.4e-35, Sum P(2) = 7.4e-35
Identities = 82/201 (40%), Positives = 116/201 (57%)
Query: 843 WDDVGGLTDIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
+ D+GGL DIQ I+E +ELP ++ Q + VLL+GPPGCGKT + A A
Sbjct: 151 YSDIGGL-DIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHH 209
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV- 960
+ FI V G E + KY+G + VRD+F A +P ++F DE D+IA KR TG
Sbjct: 210 TTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGAD 269
Query: 961 --TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R++ + L ++DG + T + V AT+R D LD ALLRPGRLDR + P R++
Sbjct: 270 REVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKR 329
Query: 1019 DILKVISRKLPLADDVDLEAI 1039
+ I+ K+ + +DVDLE I
Sbjct: 330 LVFTTITSKMNVGEDVDLEDI 350
Score = 149 (57.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 62/239 (25%), Positives = 100/239 (41%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS---LEKGPIIRQALSN 646
P +L+ GPPG GKT LAKAVA HH A + V S L +GP + + +
Sbjct: 186 PRGVLLFGPPGCGKTMLAKAVA----HHT--TASFIRVVGSEFVQKYLGEGP---RMVRD 236
Query: 647 FISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCG 706
A ++PSI+ D + L + L++ MD + E
Sbjct: 237 LFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDETTN---- 291
Query: 707 IGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEIL 766
I + + + + +L GR D ++LP P +++ + + ++ D L
Sbjct: 292 ---IKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVG-EDVDL 347
Query: 767 LDVASKCDGYDAYDLEILVDRT-VHAA-VGRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
D+ ++ D D+ + +HA RY+ + FEK K T VR D +A HEF
Sbjct: 348 EDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEKGYK-TSVRKD--EAQHEF 403
Score = 44 (20.5 bits), Expect = 7.4e-35, Sum P(2) = 7.4e-35
Identities = 25/123 (20%), Positives = 48/123 (39%)
Query: 171 KRRKNNVKK---HEDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALT-SV 226
K + N+KK H ++ + L D + G+ + V T
Sbjct: 49 KEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDR 108
Query: 227 AFINPETAENVSLCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECR 286
+ P ++ + S LV ++P ++ +P K +++ +I GG K+E R
Sbjct: 109 EQLKPSSSVGLHKQSNCLVDLVP--PEADSTISMLSPDEKPDISYSDI-GGLDIQKQEIR 165
Query: 287 QAV 289
+AV
Sbjct: 166 EAV 168
Score = 43 (20.2 bits), Expect = 9.4e-35, Sum P(2) = 9.4e-35
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 603 KTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
K +A+ +SLE + L H ++V +L +E I Q ++I E
Sbjct: 5 KEEIAQFHEQSLEKYDGLDPHDLYVLYKKLQMELELI--QVQEDYIKE 50
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 389 (142.0 bits), Expect = 7.6e-35, P = 7.6e-35
Identities = 97/244 (39%), Positives = 134/244 (54%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
+R D S A+H+ LP + + + S ++ VGGL IKE+IELP K P +
Sbjct: 126 LRAD-SYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPEL 184
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
F + VLL+GPPG GKT + A A FI V G EL+ K+IG + VR++
Sbjct: 185 FDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVREL 244
Query: 930 FSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAA 986
F A AP ++F DE DSI R ++G R + + L +LDG E + V A
Sbjct: 245 FVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 304
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMTE 1044
T+R D+LD ALLRPGR+DR + +FP+P E R DILK+ SRK+ L +++ IA
Sbjct: 305 TNRIDILDPALLRPGRIDRKI--EFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIP 362
Query: 1045 GFSG 1048
G SG
Sbjct: 363 GASG 366
Score = 133 (51.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 57/238 (23%), Positives = 101/238 (42%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L+ GPPG+GKT LA+AVA HH + + V S L ++K G
Sbjct: 185 FDALGIAQPKGVLLFGPPGTGKTLLARAVA----HHTECT--FIRVSGSEL-VQKFIGEG 237
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 238 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLE-LLNQLDGF-E 294
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ PAP R IL+ I R +
Sbjct: 295 ATKN------IKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILK--IHSRKM 346
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
I + +A + G +++ + + + A R +H + FE + + +D
Sbjct: 347 NLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKD 404
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 388 (141.6 bits), Expect = 9.8e-35, P = 9.8e-35
Identities = 90/213 (42%), Positives = 120/213 (56%)
Query: 841 SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
S +D VGGL IKE+IELP K P +F + V+LYGPPG GKT + A A
Sbjct: 141 STYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 200
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG- 959
+FI V G EL+ KYIG + VR++F A AP ++F DE DSI R ++G
Sbjct: 201 HTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGG 260
Query: 960 --VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR-- 1015
R + + L +LDG E + + AT+R D+LD ALLRPGR+DR + +FP+P
Sbjct: 261 DSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKI--EFPAPTVA 318
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R DILK+ SR + L ++L IA G SG
Sbjct: 319 ARTDILKIHSRSMNLTRGINLRKIAEKMNGCSG 351
Score = 162 (62.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 61/239 (25%), Positives = 108/239 (45%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + + P ++++GPPG+GKT LA+AVA HH + + V S L ++K G
Sbjct: 170 FESLGIAQPKGVILYGPPGTGKTLLARAVA----HHTE--CKFIRVSGSEL-VQKYIGEG 222
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 223 SRMVRELFVM-AREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLE-LLNQLDGF-E 279
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K I + + L+ + +L GR D ++ PAP + R IL+ I RS+
Sbjct: 280 SSKD------IKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDILK--IHSRSM 331
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRDD 815
+ I L +A K +G D++ + + ++A R +H + FE + + ++D
Sbjct: 332 NLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVAKVMSKND 390
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 388 (141.6 bits), Expect = 9.8e-35, P = 9.8e-35
Identities = 88/211 (41%), Positives = 118/211 (55%)
Query: 841 SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
S +D VGGLT IKE+IELP K P +F + V+LYGPPG GKT + A A
Sbjct: 145 STYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 204
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG- 959
+FI V G EL+ KYIG + VR++F A AP ++F DE DSI R + G
Sbjct: 205 HTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGG 264
Query: 960 --VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
R + + L +LDG E + + AT+R D+LD ALLRPGR+DR + PS R
Sbjct: 265 DSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAAR 324
Query: 1018 LDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+IL++ SRK+ L ++L +A G SG
Sbjct: 325 AEILRIHSRKMNLTRGINLRKVAEKMNGCSG 355
Score = 149 (57.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 59/228 (25%), Positives = 102/228 (44%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + + P ++++GPPG+GKT LA+AVA HH D + V + L ++K G
Sbjct: 174 FESLGIAQPKGVILYGPPGTGKTLLARAVA----HHTD--CKFIRVSGAEL-VQKYIGEG 226
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 227 SRMVRELFVM-AREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLE-LLNQLDGF-E 283
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + L+ + +L GR D ++ P P+ + R IL I R +
Sbjct: 284 TSKN------IKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILR--IHSRKM 335
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFE 804
+ I L VA K +G D++ + + ++A R +H + FE
Sbjct: 336 NLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 383
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 388 (141.6 bits), Expect = 9.8e-35, P = 9.8e-35
Identities = 99/245 (40%), Positives = 136/245 (55%)
Query: 812 VRDDFSQAMHEFLPVAMRDITKTSA--EGGRSGWDDVGGL-TDIQNAIKEMIELPSKFPN 868
+R D + A+HE LP + + + S ++ VGGL T I+ IKE+IELP K P
Sbjct: 142 LRAD-NYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKE-IKEVIELPVKHPE 199
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
+F + VLLYGPPG GKT + A A FI V G EL+ K+IG + VR+
Sbjct: 200 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRE 259
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFA 985
+F A AP ++F DE DSI R + G R + + L +LDG E + V
Sbjct: 260 LFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIM 319
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKVISRKLPLADDVDLEAIAHMT 1043
AT+R D+LD+ALLRPGR+DR + +FP+P E R ILK+ SRK+ L + ++ IA
Sbjct: 320 ATNRIDILDSALLRPGRIDRKI--EFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQI 377
Query: 1044 EGFSG 1048
G SG
Sbjct: 378 PGASG 382
Score = 143 (55.4 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 58/238 (24%), Positives = 103/238 (43%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + P +L++GPPG+GKT LA+AVA HH + + V S L ++K G
Sbjct: 201 FDALGIAQPKGVLLYGPPGTGKTLLARAVA----HHTECT--FIRVSGSEL-VQKFIGEG 253
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 254 ARMVRELFVM-AREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLE-LLNQLDGF-E 310
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + ++ + +L GR D ++ PAP R IL+ I R +
Sbjct: 311 ATKN------IKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILK--IHSRKM 362
Query: 760 ECSDEILLD-VASKCDGYDAYDLE-ILVDRTVHAAVGRYLH-SDSSFEKHIKPTLVRD 814
I +D +A + G +++ + + + A R +H + FE + + +D
Sbjct: 363 NLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKD 420
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 413 (150.4 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 91/209 (43%), Positives = 118/209 (56%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+DDV G+ + + E++E K P F R+ VLL GPPG GKT + A A
Sbjct: 219 FDDVAGVDEAKQDFMEVVEFLKK-PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 277
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ F S+ G E + ++G VRD+F KA APC++F DE D++ +RG G D
Sbjct: 278 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 337
Query: 963 ---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
+ +NQ LTE+DG E TGV V AAT+R D+LD+ALLRPGR DR + D P + R D
Sbjct: 338 EREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTD 397
Query: 1020 ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
ILKV S V LE IA T GFSG
Sbjct: 398 ILKVHSGNKKFESGVSLEVIAMRTPGFSG 426
Score = 41 (19.5 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 532 GDSVSFYTVKERGSTQGFD 550
G+ +S YT K+R G D
Sbjct: 10 GNGLSVYTTKQRFQKLGLD 28
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 387 (141.3 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 79/206 (38%), Positives = 122/206 (59%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
VGGL + ++E+IELP K P +F + ++ VLLYGPPG GKT + A AA+ +
Sbjct: 134 VGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVN 193
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT---D 962
F+ V +++KYIG S + +R++F A PC++F DE D+I +R + T
Sbjct: 194 FLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQ 253
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R + + L ++DG + L + AT+RPD LD ALLRPGRLDR + P+ R++ILK
Sbjct: 254 RTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILK 313
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSG 1048
+ K+ ++D EA+ +T+G +G
Sbjct: 314 IHLEKVSKQGEIDYEALVKLTDGTNG 339
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 402 (146.6 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 84/215 (39%), Positives = 123/215 (57%)
Query: 837 EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 896
E R + DV G+ +++ + E++E K P + + R+ VLL+G PG GKT +
Sbjct: 151 EKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLAR 209
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
A A + F S+ G + + ++G VRD+F +A APC++F DE D++ +RG
Sbjct: 210 AIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAG 269
Query: 957 NTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
G D + +NQ L E+DG G+ + AAT+RPD+LD ALLRPGR DR + D P
Sbjct: 270 LGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPD 329
Query: 1014 PRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R +ILKV + PL DDVDL+ +A T GF+G
Sbjct: 330 INGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTG 364
Score = 126 (49.4 bits), Expect = 0.00041, P = 0.00041
Identities = 53/208 (25%), Positives = 90/208 (43%)
Query: 589 LPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFI 648
+P +L+ G PG+GKT LA+A+A ++ FV + + G + +
Sbjct: 190 IPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFV---EMFVGVGA---SRVRDLF 243
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+A +AP IV D + L + LV+ MD + S+ GI
Sbjct: 244 EQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVE-MDGFN----SNEGI- 297
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+A+ + + +L GRFD H+ + P + RK IL+ ++ + L D++ LD
Sbjct: 298 --IIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPL--GDDVDLD 353
Query: 769 V-ASKCDGYDAYDLEILVDRTVHAAVGR 795
V A + G+ DL +V+ A R
Sbjct: 354 VLARRTPGFTGADLANMVNEAALLAARR 381
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 402 (146.6 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 84/215 (39%), Positives = 123/215 (57%)
Query: 837 EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 896
E R + DV G+ +++ + E++E K P + + R+ VLL+G PG GKT +
Sbjct: 151 EKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLAR 209
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
A A + F S+ G + + ++G VRD+F +A APC++F DE D++ +RG
Sbjct: 210 AIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAG 269
Query: 957 NTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
G D + +NQ L E+DG G+ + AAT+RPD+LD ALLRPGR DR + D P
Sbjct: 270 LGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPD 329
Query: 1014 PRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R +ILKV + PL DDVDL+ +A T GF+G
Sbjct: 330 INGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTG 364
Score = 126 (49.4 bits), Expect = 0.00041, P = 0.00041
Identities = 53/208 (25%), Positives = 90/208 (43%)
Query: 589 LPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFI 648
+P +L+ G PG+GKT LA+A+A ++ FV + + G + +
Sbjct: 190 IPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFV---EMFVGVGA---SRVRDLF 243
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+A +AP IV D + L + LV+ MD + S+ GI
Sbjct: 244 EQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVE-MDGFN----SNEGI- 297
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+A+ + + +L GRFD H+ + P + RK IL+ ++ + L D++ LD
Sbjct: 298 --IIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPL--GDDVDLD 353
Query: 769 V-ASKCDGYDAYDLEILVDRTVHAAVGR 795
V A + G+ DL +V+ A R
Sbjct: 354 VLARRTPGFTGADLANMVNEAALLAARR 381
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 403 (146.9 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 86/215 (40%), Positives = 126/215 (58%)
Query: 840 RSGWDDVGGLTDIQNAIKEMIEL---PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 896
++ + DV G + + +KE+++ PS+F + + P + VL+ GPPG GKT +
Sbjct: 152 KTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIP----TGVLMVGPPGTGKTLLAK 207
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
A A + F ++ G + + ++G VRD+F +A A+PC++F DE D++ +RG
Sbjct: 208 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAG 267
Query: 957 NTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
G D + +NQ L E+DG E G+ V AAT+RPD+LD ALLRPGR DR + P
Sbjct: 268 VGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 327
Query: 1014 PRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R R ILKV RK+PLA+DV+ IA T GFSG
Sbjct: 328 VRGREQILKVHMRKVPLANDVEPSLIARGTPGFSG 362
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 403 (146.9 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 86/215 (40%), Positives = 126/215 (58%)
Query: 840 RSGWDDVGGLTDIQNAIKEMIEL---PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 896
++ + DV G + + +KE+++ PS+F + + P + VL+ GPPG GKT +
Sbjct: 152 KTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIP----TGVLMVGPPGTGKTLLAK 207
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
A A + F ++ G + + ++G VRD+F +A A+PC++F DE D++ +RG
Sbjct: 208 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAG 267
Query: 957 NTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
G D + +NQ L E+DG E G+ V AAT+RPD+LD ALLRPGR DR + P
Sbjct: 268 VGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 327
Query: 1014 PRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R R ILKV RK+PLA+DV+ IA T GFSG
Sbjct: 328 VRGREQILKVHMRKVPLANDVEPSLIARGTPGFSG 362
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 403 (146.9 bits), Expect = 2.7e-34, P = 2.7e-34
Identities = 89/217 (41%), Positives = 125/217 (57%)
Query: 835 SAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHI 894
S E ++ + DV G + + + E+++ + P+ F + R+ S +LL G PG GKT +
Sbjct: 145 SEEQIKTTFADVAGCDEAKEDVAELVDYLRE-PSRFQKLGGRIPSGILLVGQPGTGKTLL 203
Query: 895 VGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRG 954
A A + F ++ G + + ++G VRD+F +A AAPC++F DE D++ +RG
Sbjct: 204 AKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRG 263
Query: 955 HDNTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDF 1011
G D + +NQ L E+DG E GV V AAT+RPD+LD ALLRPGR DR +
Sbjct: 264 AGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVGL 323
Query: 1012 PSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P R R ILKV RK+PL DDV E IA T GFSG
Sbjct: 324 PDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSG 360
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 371 (135.7 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 87/211 (41%), Positives = 123/211 (58%)
Query: 845 DVGGLTDIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACS 903
DVGGL D+Q ++E +ELP +++ Q + VLLYGPPG GKT +V A A + +
Sbjct: 135 DVGGL-DVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTA 193
Query: 904 LRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV--- 960
FI V G E + KY+G + VRD+F A AP ++F DE D+IA KR TG
Sbjct: 194 ANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADRE 253
Query: 961 TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD- 1019
R++ + LT++DG + V V AT+R D LD ALLRPGRLDR + +FPS R+R
Sbjct: 254 VQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKI--EFPSYRDRRQR 311
Query: 1020 --ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+ + I+ K+ L+ +VDL+ + SG
Sbjct: 312 RLVFQTITAKMLLSPEVDLDTFIMRPDASSG 342
Score = 40 (19.1 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 229 INPETAENVSLCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQA 288
+ P + + S LV ILP +++ P + +++ ++ GG K+E R+A
Sbjct: 93 LKPSASVALQRHSNALVDILP--PEADSSISMLRPDERPDVSYADV-GGLDVQKQEVREA 149
Query: 289 V 289
V
Sbjct: 150 V 150
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 401 (146.2 bits), Expect = 4.1e-34, P = 4.1e-34
Identities = 88/212 (41%), Positives = 119/212 (56%)
Query: 843 WDDVGGLTDIQNAIKEMIEL---PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 899
+DDV G+ + + +KE++E P KF + + P VLL GPPG GKT + A A
Sbjct: 155 FDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPC----GVLLVGPPGTGKTLLAKAVA 210
Query: 900 AACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 959
+ F ++ G + + ++G VRD+F +A APC++F DE D++ RG G
Sbjct: 211 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGG 270
Query: 960 VTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 1016
D + +NQ L E+DG E G+ V AAT+RPD+LD ALLRPGR DR + P +
Sbjct: 271 GHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKG 330
Query: 1017 RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R ILKV KLPLA DV IA T GFSG
Sbjct: 331 REYILKVHMNKLPLAKDVKASVIARGTPGFSG 362
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 382 (139.5 bits), Expect = 4.3e-34, P = 4.3e-34
Identities = 79/206 (38%), Positives = 122/206 (59%)
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGLTD ++E+IELP P +F + + LLYGPPG GKT + A A+
Sbjct: 143 IGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDAN 202
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT---D 962
F+ V +++KYIG S + +R++F+ A PC++F DE D+I +R + T
Sbjct: 203 FLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 262
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R + + L ++DG + L V + AT+RPD LD ALLRPGRLDR + P+ + RL+ILK
Sbjct: 263 RTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILK 322
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSG 1048
+ + K+ ++D EAI +++ F+G
Sbjct: 323 IHALKIAKHGEIDYEAIVKLSDNFNG 348
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 573 LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL 632
LL+P+ L+ P P L++GPPG+GKT LA+AVA L+ + V V +
Sbjct: 161 LLNPE--LFLRVGITP-PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV--DKY 215
Query: 633 SLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVD 692
E +IR+ + N+ A DH P I+ D + L + L++
Sbjct: 216 IGESARLIRE-MFNY---ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLME-LLN 270
Query: 693 IMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILE- 751
MD + +G + + + + + +L GR D +++P P R IL+
Sbjct: 271 QMDGFDS-------LGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKI 323
Query: 752 HEIQ-RRSLECSDEILLDVASKCDGYD 777
H ++ + E E ++ ++ +G D
Sbjct: 324 HALKIAKHGEIDYEAIVKLSDNFNGAD 350
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 401 (146.2 bits), Expect = 4.3e-34, P = 4.3e-34
Identities = 84/207 (40%), Positives = 122/207 (58%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
DV G + + +KE+++ + P F + R+ + VL+ GPPG GKT + A A +
Sbjct: 158 DVAGCDEAKEEVKELVDY-LRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGESKV 216
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD-- 962
F ++ G + + ++G VRD+F +A +APC++F DE D++ +RG G D
Sbjct: 217 PFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGLGGGHDER 276
Query: 963 -RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
+ +NQ L E+DG E G+ V AAT+RPD+LD+ALLRPGR DR + P R R IL
Sbjct: 277 EQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGREQIL 336
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSG 1048
KV RK+PL++DV IA T GFSG
Sbjct: 337 KVHMRKVPLSEDVKASVIARGTPGFSG 363
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 400 (145.9 bits), Expect = 5.1e-34, P = 5.1e-34
Identities = 86/210 (40%), Positives = 120/210 (57%)
Query: 845 DVGGLTDIQNAIKEMIEL---PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
DV G + + + E++E PS+F + + P VL+ GPPG GKT + A A
Sbjct: 153 DVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP----KGVLMVGPPGTGKTLLAKAIAGE 208
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ F ++ G + + ++G VRD+F +A AAPC++F DE D++ +RG G
Sbjct: 209 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGH 268
Query: 962 D---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
D + +NQ L E+DG E G+ V AAT+RPD+LD ALLRPGR DR + P R R
Sbjct: 269 DEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGRE 328
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
ILKV R++PLA D+D IA T GFSG
Sbjct: 329 QILKVHMRRVPLAPDIDAAIIARGTPGFSG 358
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 380 (138.8 bits), Expect = 7.0e-34, P = 7.0e-34
Identities = 90/212 (42%), Positives = 117/212 (55%)
Query: 841 SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
S +D +GGL IKE+IEL K P +F + VLLYGPPG GKT + A A
Sbjct: 129 STYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 188
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 960
RFI V G EL+ KYIG + VR++F A AP ++F DE DSI R D+ G
Sbjct: 189 HTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR-IDSAGS 247
Query: 961 TD----RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 1016
D R + + L +LDG E + + AT+R D+LD ALLRPGR+DR + PS
Sbjct: 248 GDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEA 307
Query: 1017 RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R DIL++ SR + L ++L IA G SG
Sbjct: 308 RADILRIHSRSMNLTRGINLTKIAEKMNGCSG 339
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 59/221 (26%), Positives = 99/221 (44%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEK--GPI 639
F + + P +L++GPPG+GKT LA+AVA HH D + V S L ++K G
Sbjct: 158 FESLGIAQPKGVLLYGPPGTGKTLLARAVA----HHTD--CRFIRVSGSEL-VQKYIGEG 210
Query: 640 IRQALSNFISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGE 699
R F+ A +HAPSI+ D + + + L++ +D + E
Sbjct: 211 SRMVRELFVM-AREHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLE-LLNQLDGF-E 267
Query: 700 KRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSL 759
K+ I + + L+ + +L GR D ++ P P+ R IL I RS+
Sbjct: 268 PTKN------IKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADILR--IHSRSM 319
Query: 760 ECSDEI-LLDVASKCDGYDAYDLE-ILVDRTVHAAVGRYLH 798
+ I L +A K +G +L+ + + ++A R +H
Sbjct: 320 NLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVH 360
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 399 (145.5 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 99/270 (36%), Positives = 139/270 (51%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
DV G + ++E+++ K P+ + ++ LL GPPG GKT + A A +
Sbjct: 263 DVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGV 321
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD-- 962
F S E + ++G VRD+F KA + APC++F DE D++ +RG G D
Sbjct: 322 PFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDER 381
Query: 963 -RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
+ +NQ LTE+DG +GV V AAT+RPD+LD+ALLRPGR DR + D P R+ IL
Sbjct: 382 EQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL 441
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVI 1081
+V SR L DVD + +A T GF+G L I +E I
Sbjct: 442 QVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDE------I 495
Query: 1082 TDALLKSIAS--KARPSVSEAEKLRLYSIY 1109
+DAL + IA K VSE EK RL + +
Sbjct: 496 SDALERIIAGPEKKNAVVSE-EKKRLVAYH 524
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 378 (138.1 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 98/278 (35%), Positives = 144/278 (51%)
Query: 785 VDRTVHAAVGR------YLHSDSSFEKHI-KP--TLVRDDFSQAMHEFLPV-AMRDITKT 834
VD+ HA VG Y+ S ++ + KP ++ +S A+ + LP A I
Sbjct: 92 VDQN-HAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQML 150
Query: 835 SA-EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTH 893
E + D+GGL + ++E +ELP ++ Q + VL+YGPPGCGKT
Sbjct: 151 RPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTM 210
Query: 894 IVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR 953
+ A AA + FI V G E + KY+G + VRD+F A +P ++F DE D+IA KR
Sbjct: 211 LAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKR 270
Query: 954 GHDNTGV---TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCD 1010
TG R++ + L ++DG + T V V AT+R D LD ALLRPGRLDR +
Sbjct: 271 FDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFP 330
Query: 1011 FPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P R++ + + ++ L+DDVDLE + SG
Sbjct: 331 LPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISG 368
Score = 125 (49.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 54/232 (23%), Positives = 95/232 (40%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L++GPPG GKT LAKAVA + V FV + L +GP + + +
Sbjct: 195 PRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFV---QKYLGEGP---RMVRDVFR 248
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A +++PSI+ D + L + L++ MD + +
Sbjct: 249 LAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQSTN------- 300
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLD 768
+ + + + + +L GR D ++ P P +++ + R +L SD++ L D
Sbjct: 301 VKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNL--SDDVDLED 358
Query: 769 VASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEKHIKPTLVRD--DF 816
++ D D+ + AV RY+ EK K + +D DF
Sbjct: 359 WVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDF 410
Score = 42 (19.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 244 LVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAV 289
LV +LP +++ + P K +++ +I GG K+E R+AV
Sbjct: 135 LVDVLP--PEADSSIQMLRPDEKPDISYGDI-GGLDMQKQEVREAV 177
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 377 (137.8 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 89/252 (35%), Positives = 139/252 (55%)
Query: 804 EKHIKP-TLVRDDFSQ-AMHEFLPVAMRDIT--KTSAEGGRSGWDDVGGLTDIQNAIKEM 859
EK +KP T V D + + +LP + + T + G + ++GGL ++E+
Sbjct: 99 EK-LKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREV 157
Query: 860 IELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYI 919
IELP P+IF + + LLYGPPG GKT + A A+ F+ V +++KYI
Sbjct: 158 IELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYI 217
Query: 920 GASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT---DRVVNQFLTELDGVE 976
G S + +R++F+ A PC++F DE D+I +R + T R + + L ++DG +
Sbjct: 218 GESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 277
Query: 977 VLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDL 1036
L V + AT+RPD LD ALLRPGRLDR L P+ R+DILK+ + L ++D
Sbjct: 278 ALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDY 337
Query: 1037 EAIAHMTEGFSG 1048
EA+ +++ F+G
Sbjct: 338 EAVVKLSDLFNG 349
Score = 120 (47.3 bits), Expect = 0.00094, P = 0.00094
Identities = 54/232 (23%), Positives = 95/232 (40%)
Query: 552 NVSSLSWMGTTASDVINRIKV-LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAV 610
N + + +G ++ I++ LL+PD F + P L++GPPG+GKT LA+A+
Sbjct: 140 NYAEIGGLGQQIRELREVIELPLLNPDI---FLRVGISPPKGCLLYGPPGTGKTLLARAI 196
Query: 611 AKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLXXXXXX 670
A ++ + V V + E +IR+ + A DH P I+ D +
Sbjct: 197 ASQMDANFLKVVSSAIV--DKYIGESARLIRE----MFAYARDHQPCIIFMDEIDAIGGR 250
Query: 671 XXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSG 730
L + L++ MD + +G + + + + + +L G
Sbjct: 251 RFSEGTSADREIQRTLME-LLNQMDGFD-------ALGQVKMIMATNRPDTLDPALLRPG 302
Query: 731 RFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKC-DGYDAYDL 781
R D +++P P R IL+ I L EI + K D ++ DL
Sbjct: 303 RLDRKLEIPLPNEVARMDILK--IHAEPLNKRGEIDYEAVVKLSDLFNGADL 352
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 404 (147.3 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 100/270 (37%), Positives = 139/270 (51%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
DV G + ++E+++ K P+ + ++ LL GPPG GKT + A A +
Sbjct: 251 DVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGV 309
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD-- 962
F S E + ++G VRD+F KA + APC++F DE D++ +RG G D
Sbjct: 310 PFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDER 369
Query: 963 -RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
+ +NQ LTE+DG +GV V AAT+RPD+LD+ALLRPGR DR + D P R+ IL
Sbjct: 370 EQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQIL 429
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKMPVI 1081
KV SR + DVD E +A T GF+G L I +E I
Sbjct: 430 KVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDE------I 483
Query: 1082 TDALLKSIAS--KARPSVSEAEKLRLYSIY 1109
+DAL + IA K VSE EK RL + +
Sbjct: 484 SDALERIIAGPEKKNAVVSE-EKKRLVAYH 512
Score = 40 (19.1 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 830 DITKTSAEGGRSGWDDVGGL 849
DI+ + EGG +D +G L
Sbjct: 180 DISVSEGEGGNGLFDFIGNL 199
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 361 (132.1 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
Identities = 81/210 (38%), Positives = 117/210 (55%)
Query: 843 WDDVGGLTDIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
+ D+GG+ DIQ ++E +ELP ++ Q + VL+YGPPGCGKT + A A
Sbjct: 164 YSDIGGM-DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV- 960
+ FI V G E + KY+G + VRD+F A AP ++F DE D+IA KR TG
Sbjct: 223 TTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGAD 282
Query: 961 --TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R++ + L ++DG + V V AT+R D LD ALL PGRLDR + P R++
Sbjct: 283 REVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQKR 342
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
+ I+ K+ L+++VDLE + SG
Sbjct: 343 LVFSTITSKMNLSEEVDLEDYVARPDKISG 372
Score = 137 (53.3 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 62/239 (25%), Positives = 104/239 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS--LEKGPIIRQALSNF 647
P +L++GPPG GKT LAKAVA HH A I V + L +GP + + +
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVA----HHTT-AAFIRVVGSEFVQKYLGEGP---RMVRDV 250
Query: 648 ISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGI 707
A ++AP+I+ D + L + L++ MD + + + +
Sbjct: 251 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQ----NVNV 305
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
I A +L+ P +L GR D ++ P P +++ + + +L S+E+ L
Sbjct: 306 KVIMATNRADTLD--P-ALLCPGRLDRKIEFPLPDRRQKRLVFSTITSKMNL--SEEVDL 360
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
D ++ D D+ + AV RY+ FEK K T+++ D + HEF
Sbjct: 361 EDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYK-TVIKKDEQE--HEF 416
Score = 41 (19.5 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 379 MDDGDLSAE---DDIIAALSSEPSS 400
M+DG + E DD+ A L+S P +
Sbjct: 1 MEDGGVLVEKPQDDVPALLNSRPQT 25
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 393 (143.4 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 85/213 (39%), Positives = 121/213 (56%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
GR +DDV G+ + + ++E++E + P F++ ++ LL GPPG GKT + A
Sbjct: 151 GRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAI 209
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A + F ++ G + + ++G VRD+F +A APC++F DE D++ RG
Sbjct: 210 AGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYG 269
Query: 959 GVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
G D + +NQ L E+DG E GV + AAT+R D+LD ALLRPGR DR + P +
Sbjct: 270 GGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIK 329
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R IL V +RK PL DVDL IA T GFSG
Sbjct: 330 GREKILGVHARKTPLGPDVDLRIIARGTPGFSG 362
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 393 (143.4 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 85/213 (39%), Positives = 121/213 (56%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
GR +DDV G+ + + ++E++E + P F++ ++ LL GPPG GKT + A
Sbjct: 151 GRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAI 209
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A + F ++ G + + ++G VRD+F +A APC++F DE D++ RG
Sbjct: 210 AGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYG 269
Query: 959 GVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
G D + +NQ L E+DG E GV + AAT+R D+LD ALLRPGR DR + P +
Sbjct: 270 GGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIK 329
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R IL V +RK PL DVDL IA T GFSG
Sbjct: 330 GREKILGVHARKTPLGPDVDLRIIARGTPGFSG 362
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 372 (136.0 bits), Expect = 5.0e-33, P = 5.0e-33
Identities = 86/210 (40%), Positives = 122/210 (58%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
DVGGL + IKE +ELP ++++Q + VLLYGPPG GKT +V A A + +
Sbjct: 156 DVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTA 215
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---T 961
FI + G E + KY+G + VRD+F A +P ++F DE D+IA KR TG
Sbjct: 216 SFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREV 275
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS---PRERL 1018
R++ + L ++DG + + V V AT+R D LD ALLRPGRLDR + +FPS RER
Sbjct: 276 QRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKI--EFPSLKDRRERR 333
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
I I+ K+ LA + DL+++ + SG
Sbjct: 334 LIFSTIASKMSLAPEADLDSLIIRNDPLSG 363
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 372 (136.0 bits), Expect = 5.0e-33, P = 5.0e-33
Identities = 86/210 (40%), Positives = 122/210 (58%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
DVGGL + IKE +ELP ++++Q + VLLYGPPG GKT +V A A + +
Sbjct: 156 DVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTA 215
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---T 961
FI + G E + KY+G + VRD+F A +P ++F DE D+IA KR TG
Sbjct: 216 SFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREV 275
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS---PRERL 1018
R++ + L ++DG + + V V AT+R D LD ALLRPGRLDR + +FPS RER
Sbjct: 276 QRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKI--EFPSLKDRRERR 333
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
I I+ K+ LA + DL+++ + SG
Sbjct: 334 LIFSTIASKMSLAPEADLDSLIIRNDPLSG 363
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 398 (145.2 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 95/269 (35%), Positives = 139/269 (51%)
Query: 837 EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 896
E R + DV G + + + E++E K P FA+ R+ VLL GPPG GKT +
Sbjct: 154 EKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAK 212
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
A A + F S+ G + + ++G VRD+F A APCL+F DE D++ +RG
Sbjct: 213 ACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAG 272
Query: 957 NTGVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
G D + +NQ L E+DG G+ + AAT+R D+LD ALLRPGR DR + D P
Sbjct: 273 LGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPD 332
Query: 1014 PRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSN 1073
R +LKV +R PL + V+L++IA T GFSG + ID+
Sbjct: 333 VIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDAR 392
Query: 1074 EPGKMPVITDALLKSIASKARPSVSEAEK 1102
+ + TD ++ A K+R +S+ E+
Sbjct: 393 D---IDEATDRVIAGPAKKSRV-ISKKER 417
Score = 38 (18.4 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 88 VSNVLKATLVTIEPLTEDD-W 107
+ N LK T V +EP E W
Sbjct: 89 IFNALKKTDVKVEPAQETSGW 109
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 361 (132.1 bits), Expect = 6.0e-33, Sum P(2) = 6.0e-33
Identities = 88/213 (41%), Positives = 122/213 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++D+GGL IQ + E I LP F + +R VLLYGPPG GKT + A AA
Sbjct: 170 YNDIGGLEKQIQELV-EAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQ 228
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ F+ + GP+L+ +IG + VRD F A APC++F DE D+I KR D+
Sbjct: 229 TNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKR-FDSEVSG 287
Query: 962 DRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE- 1016
DR V + L +LDG + V AAT+R D+LD AL+R GRLDR + +FP P E
Sbjct: 288 DREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKI--EFPHPTEE 345
Query: 1017 -RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R IL++ SRK+ + DV+ E +A T+ F+G
Sbjct: 346 ARARILQIHSRKMNVHPDVNFEELARSTDDFNG 378
Score = 38 (18.4 bits), Expect = 6.0e-33, Sum P(2) = 6.0e-33
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 749 ILEHEIQRRSLEC 761
IL+ + QR +LEC
Sbjct: 38 ILKEDAQRTNLEC 50
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 369 (135.0 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/262 (36%), Positives = 140/262 (53%)
Query: 796 YLHSDSSFEKHI-KP--TLVRDDFSQAMHEFLPV-AMRDITK-TSAEGGRSGWDDVGGLT 850
Y+ S+ ++ + KP ++ S A+ + LP A I TS + + D+GG+
Sbjct: 111 YVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGM- 169
Query: 851 DIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
DIQ ++E +ELP ++ Q + VL+YGPPGCGKT + A A + FI V
Sbjct: 170 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 229
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVN 966
G E + KY+G + VRD+F A AP ++F DE D+IA KR TG R++
Sbjct: 230 VGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 289
Query: 967 QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR 1026
+ L ++DG + V V AT+R D LD ALLRPGRLDR + P R++ I I+
Sbjct: 290 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITS 349
Query: 1027 KLPLADDVDLEAIAHMTEGFSG 1048
K+ L+++VDLE + SG
Sbjct: 350 KMNLSEEVDLEDYVARPDKISG 371
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 63/239 (26%), Positives = 105/239 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS--LEKGPIIRQALSNF 647
P +L++GPPG GKT LAKAVA HH A I V + L +GP + + +
Sbjct: 198 PRGVLMYGPPGCGKTMLAKAVA----HHTT-AAFIRVVGSEFVQKYLGEGP---RMVRDV 249
Query: 648 ISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGI 707
A ++AP+I+ D + L + L++ MD + + + +
Sbjct: 250 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQ----NVNV 304
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
I A +L+ P +L GR D ++ P P +++ I + +L S+E+ L
Sbjct: 305 KVIMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNL--SEEVDL 359
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
D ++ D D+ + + AV RY+ FEK K T+++ D + HEF
Sbjct: 360 EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK-TVIKKDEQE--HEF 415
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 369 (135.0 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/262 (36%), Positives = 140/262 (53%)
Query: 796 YLHSDSSFEKHI-KP--TLVRDDFSQAMHEFLPV-AMRDITK-TSAEGGRSGWDDVGGLT 850
Y+ S+ ++ + KP ++ S A+ + LP A I TS + + D+GG+
Sbjct: 112 YVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGM- 170
Query: 851 DIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
DIQ ++E +ELP ++ Q + VL+YGPPGCGKT + A A + FI V
Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVN 966
G E + KY+G + VRD+F A AP ++F DE D+IA KR TG R++
Sbjct: 231 VGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 290
Query: 967 QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR 1026
+ L ++DG + V V AT+R D LD ALLRPGRLDR + P R++ I I+
Sbjct: 291 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITS 350
Query: 1027 KLPLADDVDLEAIAHMTEGFSG 1048
K+ L+++VDLE + SG
Sbjct: 351 KMNLSEEVDLEDYVARPDKISG 372
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 63/239 (26%), Positives = 105/239 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS--LEKGPIIRQALSNF 647
P +L++GPPG GKT LAKAVA HH A I V + L +GP + + +
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVA----HHTT-AAFIRVVGSEFVQKYLGEGP---RMVRDV 250
Query: 648 ISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGI 707
A ++AP+I+ D + L + L++ MD + + + +
Sbjct: 251 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQ----NVNV 305
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
I A +L+ P +L GR D ++ P P +++ I + +L S+E+ L
Sbjct: 306 KVIMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNL--SEEVDL 360
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
D ++ D D+ + + AV RY+ FEK K T+++ D + HEF
Sbjct: 361 EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK-TVIKKDEQE--HEF 416
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 369 (135.0 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/262 (36%), Positives = 140/262 (53%)
Query: 796 YLHSDSSFEKHI-KP--TLVRDDFSQAMHEFLPV-AMRDITK-TSAEGGRSGWDDVGGLT 850
Y+ S+ ++ + KP ++ S A+ + LP A I TS + + D+GG+
Sbjct: 112 YVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGM- 170
Query: 851 DIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
DIQ ++E +ELP ++ Q + VL+YGPPGCGKT + A A + FI V
Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVN 966
G E + KY+G + VRD+F A AP ++F DE D+IA KR TG R++
Sbjct: 231 VGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 290
Query: 967 QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR 1026
+ L ++DG + V V AT+R D LD ALLRPGRLDR + P R++ I I+
Sbjct: 291 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITS 350
Query: 1027 KLPLADDVDLEAIAHMTEGFSG 1048
K+ L+++VDLE + SG
Sbjct: 351 KMNLSEEVDLEDYVARPDKISG 372
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 63/239 (26%), Positives = 105/239 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS--LEKGPIIRQALSNF 647
P +L++GPPG GKT LAKAVA HH A I V + L +GP + + +
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVA----HHTT-AAFIRVVGSEFVQKYLGEGP---RMVRDV 250
Query: 648 ISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGI 707
A ++AP+I+ D + L + L++ MD + + + +
Sbjct: 251 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQ----NVNV 305
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
I A +L+ P +L GR D ++ P P +++ I + +L S+E+ L
Sbjct: 306 KVIMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNL--SEEVDL 360
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
D ++ D D+ + + AV RY+ FEK K T+++ D + HEF
Sbjct: 361 EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK-TVIKKDEQE--HEF 416
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 369 (135.0 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/262 (36%), Positives = 140/262 (53%)
Query: 796 YLHSDSSFEKHI-KP--TLVRDDFSQAMHEFLPV-AMRDITK-TSAEGGRSGWDDVGGLT 850
Y+ S+ ++ + KP ++ S A+ + LP A I TS + + D+GG+
Sbjct: 112 YVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGM- 170
Query: 851 DIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
DIQ ++E +ELP ++ Q + VL+YGPPGCGKT + A A + FI V
Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVN 966
G E + KY+G + VRD+F A AP ++F DE D+IA KR TG R++
Sbjct: 231 VGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 290
Query: 967 QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR 1026
+ L ++DG + V V AT+R D LD ALLRPGRLDR + P R++ I I+
Sbjct: 291 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITS 350
Query: 1027 KLPLADDVDLEAIAHMTEGFSG 1048
K+ L+++VDLE + SG
Sbjct: 351 KMNLSEEVDLEDYVARPDKISG 372
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 63/239 (26%), Positives = 105/239 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS--LEKGPIIRQALSNF 647
P +L++GPPG GKT LAKAVA HH A I V + L +GP + + +
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVA----HHTT-AAFIRVVGSEFVQKYLGEGP---RMVRDV 250
Query: 648 ISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGI 707
A ++AP+I+ D + L + L++ MD + + + +
Sbjct: 251 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQ----NVNV 305
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
I A +L+ P +L GR D ++ P P +++ I + +L S+E+ L
Sbjct: 306 KVIMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNL--SEEVDL 360
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
D ++ D D+ + + AV RY+ FEK K T+++ D + HEF
Sbjct: 361 EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK-TVIKKDEQE--HEF 416
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 369 (135.0 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/262 (36%), Positives = 140/262 (53%)
Query: 796 YLHSDSSFEKHI-KP--TLVRDDFSQAMHEFLPV-AMRDITK-TSAEGGRSGWDDVGGLT 850
Y+ S+ ++ + KP ++ S A+ + LP A I TS + + D+GG+
Sbjct: 112 YVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGM- 170
Query: 851 DIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
DIQ ++E +ELP ++ Q + VL+YGPPGCGKT + A A + FI V
Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVN 966
G E + KY+G + VRD+F A AP ++F DE D+IA KR TG R++
Sbjct: 231 VGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 290
Query: 967 QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR 1026
+ L ++DG + V V AT+R D LD ALLRPGRLDR + P R++ I I+
Sbjct: 291 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITS 350
Query: 1027 KLPLADDVDLEAIAHMTEGFSG 1048
K+ L+++VDLE + SG
Sbjct: 351 KMNLSEEVDLEDYVARPDKISG 372
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 63/239 (26%), Positives = 105/239 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS--LEKGPIIRQALSNF 647
P +L++GPPG GKT LAKAVA HH A I V + L +GP + + +
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVA----HHTT-AAFIRVVGSEFVQKYLGEGP---RMVRDV 250
Query: 648 ISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGI 707
A ++AP+I+ D + L + L++ MD + + + +
Sbjct: 251 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQ----NVNV 305
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
I A +L+ P +L GR D ++ P P +++ I + +L S+E+ L
Sbjct: 306 KVIMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNL--SEEVDL 360
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
D ++ D D+ + + AV RY+ FEK K T+++ D + HEF
Sbjct: 361 EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK-TVIKKDEQE--HEF 416
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 369 (135.0 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/262 (36%), Positives = 140/262 (53%)
Query: 796 YLHSDSSFEKHI-KP--TLVRDDFSQAMHEFLPV-AMRDITK-TSAEGGRSGWDDVGGLT 850
Y+ S+ ++ + KP ++ S A+ + LP A I TS + + D+GG+
Sbjct: 112 YVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGM- 170
Query: 851 DIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
DIQ ++E +ELP ++ Q + VL+YGPPGCGKT + A A + FI V
Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVN 966
G E + KY+G + VRD+F A AP ++F DE D+IA KR TG R++
Sbjct: 231 VGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 290
Query: 967 QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR 1026
+ L ++DG + V V AT+R D LD ALLRPGRLDR + P R++ I I+
Sbjct: 291 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITS 350
Query: 1027 KLPLADDVDLEAIAHMTEGFSG 1048
K+ L+++VDLE + SG
Sbjct: 351 KMNLSEEVDLEDYVARPDKISG 372
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 63/239 (26%), Positives = 105/239 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS--LEKGPIIRQALSNF 647
P +L++GPPG GKT LAKAVA HH A I V + L +GP + + +
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVA----HHTT-AAFIRVVGSEFVQKYLGEGP---RMVRDV 250
Query: 648 ISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGI 707
A ++AP+I+ D + L + L++ MD + + + +
Sbjct: 251 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQ----NVNV 305
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
I A +L+ P +L GR D ++ P P +++ I + +L S+E+ L
Sbjct: 306 KVIMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNL--SEEVDL 360
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
D ++ D D+ + + AV RY+ FEK K T+++ D + HEF
Sbjct: 361 EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK-TVIKKDEQE--HEF 416
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 369 (135.0 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/262 (36%), Positives = 140/262 (53%)
Query: 796 YLHSDSSFEKHI-KP--TLVRDDFSQAMHEFLPV-AMRDITK-TSAEGGRSGWDDVGGLT 850
Y+ S+ ++ + KP ++ S A+ + LP A I TS + + D+GG+
Sbjct: 112 YVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGM- 170
Query: 851 DIQNA-IKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
DIQ ++E +ELP ++ Q + VL+YGPPGCGKT + A A + FI V
Sbjct: 171 DIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVN 966
G E + KY+G + VRD+F A AP ++F DE D+IA KR TG R++
Sbjct: 231 VGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILL 290
Query: 967 QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR 1026
+ L ++DG + V V AT+R D LD ALLRPGRLDR + P R++ I I+
Sbjct: 291 ELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITS 350
Query: 1027 KLPLADDVDLEAIAHMTEGFSG 1048
K+ L+++VDLE + SG
Sbjct: 351 KMNLSEEVDLEDYVARPDKISG 372
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 63/239 (26%), Positives = 105/239 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLS--LEKGPIIRQALSNF 647
P +L++GPPG GKT LAKAVA HH A I V + L +GP + + +
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVA----HHTT-AAFIRVVGSEFVQKYLGEGP---RMVRDV 250
Query: 648 ISEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGI 707
A ++AP+I+ D + L + L++ MD + + + +
Sbjct: 251 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLE-LLNQMDGFDQ----NVNV 305
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
I A +L+ P +L GR D ++ P P +++ I + +L S+E+ L
Sbjct: 306 KVIMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNL--SEEVDL 360
Query: 767 LDVASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEKHIKPTLVRDDFSQAMHEF 823
D ++ D D+ + + AV RY+ FEK K T+++ D + HEF
Sbjct: 361 EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK-TVIKKDEQE--HEF 416
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 386 (140.9 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 84/207 (40%), Positives = 118/207 (57%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
+V G+ + + + E++E K F R+ +LL GPPG GKT + A A +
Sbjct: 160 NVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGV 218
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD-- 962
F S+ G E + ++G VRD+F +A APC++F DE D++ +RG G D
Sbjct: 219 PFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDER 278
Query: 963 -RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
+ +NQ L E+DG + T V V AAT+RPD+LD ALLRPGR DR + D P R IL
Sbjct: 279 EQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGREAIL 338
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSG 1048
K+ ++ PLAD V+LE +A T GFSG
Sbjct: 339 KIHAKGKPLADTVNLENLAKQTVGFSG 365
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 389 (142.0 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 81/206 (39%), Positives = 118/206 (57%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ DV G + ++ ++E++E P F+ +L VLL GPPG GKT + A A
Sbjct: 314 FSDVHGCDEAKDELQELVEFLLN-PERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEA 372
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ F + G E Y+G + VR++F++A + +P ++F DE D+I KR +
Sbjct: 373 GVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKRNERDAAYVK 432
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
+ +NQ LTELDG TGV + AAT+ P+LLD AL RPGR DR + D P R R+DILK
Sbjct: 433 QTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGRMDILK 492
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSG 1048
+ + ++ DVD+ IA T GFSG
Sbjct: 493 HHMKNVQISTDVDVAVIARGTSGFSG 518
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 366 (133.9 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 92/217 (42%), Positives = 125/217 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 150 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 204
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD FS A AP ++F DE D+I KR D+
Sbjct: 205 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKR-FDS 263
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 264 EKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 321
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ ++ DV+ E +A T+ F+G
Sbjct: 322 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 358
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 363 (132.8 bits), Expect = 4.6e-32, P = 4.6e-32
Identities = 117/325 (36%), Positives = 162/325 (49%)
Query: 747 KAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSF--- 803
K E IQR L S+ LLDV D ++++ R AV + + F
Sbjct: 35 KMSTEEIIQRTRLLDSEIKLLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPV 94
Query: 804 -----EKHIKP-TLVR-DDFSQAMHEFLPVAMRDITKTSAEGGR--SGWDDVGGLT-DIQ 853
+ +KP LV + S + E LP K R + D+GGL IQ
Sbjct: 95 IGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 154
Query: 854 NAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
+ E I LP KF N+ Q P VL+YGPPG GKT + A AA F+ +
Sbjct: 155 ELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARACAAQTKATFLKL 209
Query: 910 KGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVN--- 966
GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+ DR V
Sbjct: 210 AGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDSEKAGDREVQRTM 268
Query: 967 -QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE--RLDILKV 1023
+ L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP P E R I+++
Sbjct: 269 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPMPNEEARARIMQI 326
Query: 1024 ISRKLPLADDVDLEAIAHMTEGFSG 1048
SRK+ ++ DV+ E +A T+ F+G
Sbjct: 327 HSRKMNVSPDVNYEELARCTDDFNG 351
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 384 (140.2 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 86/212 (40%), Positives = 122/212 (57%)
Query: 843 WDDVGGLTDIQNAIKEMIEL---PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 899
+DDV G+ + + +KE+++ P KF I + P VLL GPPG GKT + A A
Sbjct: 174 FDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVP----KGVLLVGPPGTGKTLLARAVA 229
Query: 900 AACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 959
+ F+S+ + + ++G VRD+F+ A +AP ++F DE D++ RG G
Sbjct: 230 GEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGG 289
Query: 960 VTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 1016
D + +NQ L+E+DG + V V AAT+RPD+LD ALLRPGR DR + D P R+
Sbjct: 290 GHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRD 349
Query: 1017 RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R IL V +RK+PL DVDL IA T G +G
Sbjct: 350 REKILHVHTRKIPLDKDVDLAVIARGTPGMAG 381
Score = 43 (20.2 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 1068 NNIDSNEPGKMPVITDALLK 1087
+N+ +N GK+ + DAL++
Sbjct: 581 DNVIANNRGKLDALVDALME 600
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 89/227 (39%), Positives = 126/227 (55%)
Query: 817 SQAMHEFLPV-AMRDITKTS-AEGGRSGWDDVGGLTDIQNA-IKEMIELPSKFPNIFAQA 873
S A+ + LP A I+ S +E ++D+GG DIQ I+E +ELP ++ Q
Sbjct: 126 SNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGC-DIQKQEIREAVELPLTHHELYKQI 184
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
+ VLLYGPPG GKT + A A + FI V G E + KY+G + VRD+F A
Sbjct: 185 GIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 244
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGV---TDRVVNQFLTELDGVEVLTGVFVFAATSRP 990
AP ++F DE D+IA R TG R++ + L ++DG + V V AT+R
Sbjct: 245 KENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRA 304
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLE 1037
D LD ALLRPGRLDR + P R++ + +V + K+ L+D+VDLE
Sbjct: 305 DTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLE 351
Score = 136 (52.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 55/229 (24%), Positives = 99/229 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L++GPPG+GKT LAKAVA H +V + L +GP + + +
Sbjct: 189 PRGVLLYGPPGTGKTMLAKAVAN---HTTAAFIRVVGSEFVQKYLGEGP---RMVRDVFR 242
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A ++AP+I+ D + L + L++ MD + + + +
Sbjct: 243 LAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILME-LLNQMDGFDQ----TVNVKV 297
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLD 768
I A +L+ P +L GR D ++ P P +++ + + + + SDE+ L D
Sbjct: 298 IMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRRQKRLVFQ--VCTSKMNLSDEVDLED 352
Query: 769 VASKCDGYDAYDLEILVDRT-VHAA-VGRYLHSDSSFEKHIKPTLVRDD 815
S+ D A ++ + +HA RY+ FEK + + + D
Sbjct: 353 YVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPD 401
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 266 KSNLTSKEISGGASTDKKECRQAV 289
K +++ +I GG K+E R+AV
Sbjct: 149 KPDVSYNDI-GGCDIQKQEIREAV 171
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 78/208 (37%), Positives = 118/208 (56%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ D+GGL + +KE +ELP P ++ + + +L+YGPPG GKT +V A A
Sbjct: 137 YTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANET 196
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV-- 960
+ FI V G E + KY+G + VRD+F A +P ++F DE D+IA KR TG
Sbjct: 197 QVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGADR 256
Query: 961 -TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
R++ + L ++DG + T V V AT+R D LD ALLRPGRLDR + P +++
Sbjct: 257 EVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRL 316
Query: 1020 ILKVISRKLPLADDVDLEAIAHMTEGFS 1047
I + I K+ ++ DV++E+ T+ S
Sbjct: 317 IFQTIISKMNVSSDVNIESFVVRTDKIS 344
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 56/231 (24%), Positives = 102/231 (44%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P ILI+GPPG+GKT L KAVA + V FV + L +GP + + +
Sbjct: 172 PMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFV---QKYLGEGP---RMVRDVFR 225
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A +++PSI+ D + + + L++++++ KS+ +
Sbjct: 226 LARENSPSIIFIDEVDAIATKRFDAQTGADRE----VQRILLELLNQMDGFDKST-NVKV 280
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
I A +L+ P +L GR D ++ P P +++ I + I + ++ SD +
Sbjct: 281 IMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVS-SDVNIESF 336
Query: 770 ASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEK----HIKPTLVRD 814
+ D A D+ + A+ RY+ + + FE+ H++ L RD
Sbjct: 337 VVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQGYRTHVRKQL-RD 386
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 78/208 (37%), Positives = 118/208 (56%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ D+GGL + +KE +ELP P ++ + + +L+YGPPG GKT +V A A
Sbjct: 137 YTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANET 196
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV-- 960
+ FI V G E + KY+G + VRD+F A +P ++F DE D+IA KR TG
Sbjct: 197 QVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGADR 256
Query: 961 -TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
R++ + L ++DG + T V V AT+R D LD ALLRPGRLDR + P +++
Sbjct: 257 EVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRL 316
Query: 1020 ILKVISRKLPLADDVDLEAIAHMTEGFS 1047
I + I K+ ++ DV++E+ T+ S
Sbjct: 317 IFQTIISKMNVSSDVNIESFVVRTDKIS 344
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 56/231 (24%), Positives = 102/231 (44%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P ILI+GPPG+GKT L KAVA + V FV + L +GP + + +
Sbjct: 172 PMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFV---QKYLGEGP---RMVRDVFR 225
Query: 650 EALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A +++PSI+ D + + + L++++++ KS+ +
Sbjct: 226 LARENSPSIIFIDEVDAIATKRFDAQTGADRE----VQRILLELLNQMDGFDKST-NVKV 280
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
I A +L+ P +L GR D ++ P P +++ I + I + ++ SD +
Sbjct: 281 IMATNRADTLD--P-ALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVS-SDVNIESF 336
Query: 770 ASKCDGYDAYDLEILVDRTVHAAV--GRYLHSDSSFEK----HIKPTLVRD 814
+ D A D+ + A+ RY+ + + FE+ H++ L RD
Sbjct: 337 VVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQGYRTHVRKQL-RD 386
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 91/217 (41%), Positives = 125/217 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 131 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 185
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 186 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDS 244
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 245 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 302
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ ++ DV+ E +A T+ F+G
Sbjct: 303 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 339
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 91/217 (41%), Positives = 125/217 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 135 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 189
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 190 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDS 248
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 249 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 306
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ ++ DV+ E +A T+ F+G
Sbjct: 307 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 343
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 91/217 (41%), Positives = 125/217 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 185 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 239
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 240 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDS 298
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 356
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ ++ DV+ E +A T+ F+G
Sbjct: 357 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 393
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 91/217 (41%), Positives = 125/217 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 185 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 239
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 240 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDS 298
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 356
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ ++ DV+ E +A T+ F+G
Sbjct: 357 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 393
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 91/217 (41%), Positives = 125/217 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 192 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 246
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 247 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDS 305
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 306 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 363
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ ++ DV+ E +A T+ F+G
Sbjct: 364 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 400
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 91/217 (41%), Positives = 125/217 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 188 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 242
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 243 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDS 301
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 302 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 359
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ ++ DV+ E +A T+ F+G
Sbjct: 360 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 396
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 91/217 (41%), Positives = 125/217 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 185 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 239
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 240 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDS 298
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 356
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ ++ DV+ E +A T+ F+G
Sbjct: 357 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 393
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 362 (132.5 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 91/217 (41%), Positives = 125/217 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 188 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 242
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 243 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDS 301
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + T V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 302 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 359
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ ++ DV+ E +A T+ F+G
Sbjct: 360 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 396
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 378 (138.1 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 82/213 (38%), Positives = 119/213 (55%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G+ +DDV G+ + + + E+++ K F + ++ LL G PG GKT + A
Sbjct: 153 GKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAI 211
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A ++ F S+ G + + ++G VRD+F + APC++F DE D++ RG
Sbjct: 212 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLG 271
Query: 959 GVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
G D + +NQ L E+DG E GV + AAT+RPD+LD ALLRPGR DR + P
Sbjct: 272 GGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDIN 331
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R I+ V ++K+PLA DVDL IA T GFSG
Sbjct: 332 GREKIIAVHAKKVPLAPDVDLRVIARGTPGFSG 364
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 378 (138.1 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 82/213 (38%), Positives = 119/213 (55%)
Query: 839 GRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
G+ +DDV G+ + + + E+++ K F + ++ LL G PG GKT + A
Sbjct: 153 GKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAI 211
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A ++ F S+ G + + ++G VRD+F + APC++F DE D++ RG
Sbjct: 212 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLG 271
Query: 959 GVTD---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
G D + +NQ L E+DG E GV + AAT+RPD+LD ALLRPGR DR + P
Sbjct: 272 GGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDIN 331
Query: 1016 ERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R I+ V ++K+PLA DVDL IA T GFSG
Sbjct: 332 GREKIIAVHAKKVPLAPDVDLRVIARGTPGFSG 364
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 340 (124.7 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 81/211 (38%), Positives = 116/211 (54%)
Query: 843 WDDVGGLT-DIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
+ D+GG IQ I E + LP + F + VL+YGPPG GKT + A AA
Sbjct: 176 YSDIGGCDKQIQELI-EAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQ 234
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 235 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAG 293
Query: 962 DRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
DR V + L +LDG + + V AAT+R D+LD ALLR GRLDR + P+ R
Sbjct: 294 DREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDAR 353
Query: 1018 LDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
I+++ SRK+ + DV+ E +A T+ F+G
Sbjct: 354 ARIMQIHSRKMNVNKDVNFEELARCTDDFNG 384
Score = 45 (20.9 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 10/36 (27%), Positives = 25/36 (69%)
Query: 87 VVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAIL 122
+VSNV++ L+ +E TE++ ++L+++ + A++
Sbjct: 82 LVSNVVE--LLDLEDNTEEEGANVDLDAQKTKCAVI 115
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 340 (124.7 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 81/211 (38%), Positives = 116/211 (54%)
Query: 843 WDDVGGLT-DIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
+ D+GG IQ I E + LP + F + VL+YGPPG GKT + A AA
Sbjct: 176 YSDIGGCDKQIQELI-EAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQ 234
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 235 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAG 293
Query: 962 DRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
DR V + L +LDG + + V AAT+R D+LD ALLR GRLDR + P+ R
Sbjct: 294 DREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDAR 353
Query: 1018 LDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
I+++ SRK+ + DV+ E +A T+ F+G
Sbjct: 354 ARIMQIHSRKMNVNKDVNFEELARCTDDFNG 384
Score = 45 (20.9 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 10/36 (27%), Positives = 25/36 (69%)
Query: 87 VVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAIL 122
+VSNV++ L+ +E TE++ ++L+++ + A++
Sbjct: 82 LVSNVVE--LLDLEDNTEEEGANVDLDAQKTKCAVI 115
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 376 (137.4 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 94/283 (33%), Positives = 135/283 (47%)
Query: 845 DVGGLTDIQNAIKEMIEL---PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
DV G+ + + + E++E P KF + + P LL GPPG GKT + A A
Sbjct: 158 DVAGIDEAKEELAEIVEFLREPKKFQKLGGKIP----KGCLLIGPPGTGKTLLAKAIAGE 213
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ F S+ G + + ++G VRD+F + APCL+F DE D++ RG G
Sbjct: 214 AKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGN 273
Query: 962 D---RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
D + +NQ L E+DG E GV + AAT+RPD+LD ALLRPGR DR + P R
Sbjct: 274 DEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQ 333
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSGXXXXXXXXXXXXXXVHEILNNIDSNEPGKM 1078
IL+V +K+P A +V++ IA T GFSG + +NE
Sbjct: 334 KILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRN-KKVVTNED--F 390
Query: 1079 PVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAA 1121
D +L + K+ E + L Y G + S K A+
Sbjct: 391 EYARDKILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEAS 433
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 346 (126.9 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 86/226 (38%), Positives = 122/226 (53%)
Query: 827 AMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGP 886
AM I K S + + D+GGL + E I LP F + ++ VL++GP
Sbjct: 174 AMEVIEKPSED-----YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGP 228
Query: 887 PGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEF 946
PG GKT + A A+ + F+ + GP+L+ +IG + VRD F+ A AP ++F DE
Sbjct: 229 PGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDEL 288
Query: 947 DSIAPKRGHDNTGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGR 1002
D+I KR D+ DR V + L +LDG V V AAT+RPD LD ALLR GR
Sbjct: 289 DAIGTKR-FDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGR 347
Query: 1003 LDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LDR + P+ R IL++ SRK+ + DV+ E +A T+ F+G
Sbjct: 348 LDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNG 393
Score = 38 (18.4 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 230 NPETAENVSLCSLELVAILPRLSSKENNPENNAPRIKSNL 269
N E VSL E+ + + +N +N +IK N+
Sbjct: 22 NSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNV 61
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 346 (126.9 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 86/226 (38%), Positives = 122/226 (53%)
Query: 827 AMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGP 886
AM I K S + + D+GGL + E I LP F + ++ VL++GP
Sbjct: 174 AMEVIEKPSED-----YSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGP 228
Query: 887 PGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEF 946
PG GKT + A A+ + F+ + GP+L+ +IG + VRD F+ A AP ++F DE
Sbjct: 229 PGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDEL 288
Query: 947 DSIAPKRGHDNTGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGR 1002
D+I KR D+ DR V + L +LDG V V AAT+RPD LD ALLR GR
Sbjct: 289 DAIGTKR-FDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGR 347
Query: 1003 LDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LDR + P+ R IL++ SRK+ + DV+ E +A T+ F+G
Sbjct: 348 LDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNG 393
Score = 38 (18.4 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 230 NPETAENVSLCSLELVAILPRLSSKENNPENNAPRIKSNL 269
N E VSL E+ + + +N +N +IK N+
Sbjct: 22 NSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDNV 61
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 356 (130.4 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 90/217 (41%), Positives = 123/217 (56%)
Query: 843 WDDVGGLT-DIQNAIKEMIELP----SKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
+ D+GGL IQ + E I LP KF N+ Q P VL+YGPPG GKT + A
Sbjct: 173 YSDIGGLDKQIQELV-EAIVLPMNHKEKFENLGIQPP----KGVLMYGPPGTGKTLLARA 227
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AA F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 228 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKR-FDS 286
Query: 958 TGVTDRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPS 1013
DR V + L +LDG + V V AAT+R D+LD ALLR GRLDR + +FP
Sbjct: 287 EKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKI--EFPM 344
Query: 1014 PRE--RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
P E R I+++ SRK+ + DV+ E +A T+ F+G
Sbjct: 345 PNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNG 381
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 333 (122.3 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 82/213 (38%), Positives = 119/213 (55%)
Query: 843 WDDVGGLT-DIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
+ D+GGL IQ I E + LP F + V+LYGPPG GKT + A AA
Sbjct: 178 FSDIGGLDKQIQELI-EAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQ 236
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F+ + GP+L+ +IG + VRD F+ A AP ++F DE D+I KR D+
Sbjct: 237 TKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAG 295
Query: 962 DRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE- 1016
DR V + L +L+G + V AAT+R D+L A LLR GRLDR + +FP P E
Sbjct: 296 DREVQRTMLELLNQLNGFSSTADIKVIAATNRVDILPA-LLRSGRLDRKI--EFPHPNEE 352
Query: 1017 -RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R I+++ SRK+ +++DV+ E ++ T+ F+G
Sbjct: 353 ARARIMQIHSRKMNVSNDVNFEELSRSTDDFNG 385
Score = 49 (22.3 bits), Expect = 4.1e-31, Sum P(2) = 4.1e-31
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 349 KDKAFGIGLELDNKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEAVY 408
K + I E+ +N K K EK I ++ ++I L +P +ED+ +V
Sbjct: 49 KSEVIRITHEIQAQNEKIKDNTEK----IKVNKTLPYLVSNVIELLDVDPQEEEDDGSVT 104
Query: 409 QFENKKGLEC 418
+N++ +C
Sbjct: 105 VLDNQRKGKC 114
Score = 37 (18.1 bits), Expect = 7.4e-30, Sum P(2) = 7.4e-30
Identities = 7/34 (20%), Positives = 17/34 (50%)
Query: 237 VSLCSLELVAILPRLSSKENNPENNAPRIKSNLT 270
+ + E++ I + ++ ++N +IK N T
Sbjct: 45 IKIMKSEVIRITHEIQAQNEKIKDNTEKIKVNKT 78
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 354 (129.7 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 86/239 (35%), Positives = 129/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 155 VHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 214
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 215 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 274
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 275 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 334
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 335 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSG 391
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 218 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 272
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +HAPSIV D + + + L++ +D + + G
Sbjct: 273 AE--EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 322
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 323 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 380
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 354 (129.7 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 86/239 (35%), Positives = 129/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 154 VHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 213
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 214 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 273
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 274 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 333
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 334 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSG 390
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 8.9e-05
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 217 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 271
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +HAPSIV D + + + L++ +D + + G
Sbjct: 272 AE--EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 321
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 322 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 379
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 354 (129.7 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 84/210 (40%), Positives = 115/210 (54%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ DVGGL + E I LP K + F +R L+YGPPG GKT + A AA
Sbjct: 180 YSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQT 239
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ F+ + P+L+ YIG + VRD F+ A AP ++F DE D+I KR D+ D
Sbjct: 240 NATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKR-FDSEKSGD 298
Query: 963 RVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R V + L +LDG V V AAT+R D+LD ALLR GRLDR + PS R
Sbjct: 299 REVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRA 358
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
IL++ SRK+ DD++ + +A T+ F+G
Sbjct: 359 QILQIHSRKMTTDDDINWQELARSTDEFNG 388
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 86/239 (35%), Positives = 129/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 156 VHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 336 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSG 392
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 273
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +HAPSIV D + + + L++ +D + + G
Sbjct: 274 AE--EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 323
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 381
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 86/239 (35%), Positives = 129/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 156 VHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 336 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSG 392
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 273
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +HAPSIV D + + + L++ +D + + G
Sbjct: 274 AE--EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 323
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 381
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 86/239 (35%), Positives = 129/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 83 VHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 142
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 143 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 202
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 203 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 262
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 263 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSG 319
Score = 130 (50.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 146 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 200
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +HAPSIV D + + + L++ +D + + G
Sbjct: 201 AE--EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 250
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 251 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 308
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 86/239 (35%), Positives = 129/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 156 VHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 336 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSG 392
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 273
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +HAPSIV D + + + L++ +D + + G
Sbjct: 274 AE--EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 323
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 381
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 86/239 (35%), Positives = 129/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 156 VHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 336 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSG 392
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 273
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +HAPSIV D + + + L++ +D + + G
Sbjct: 274 AE--EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 323
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 381
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 86/239 (35%), Positives = 129/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 156 VHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 336 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSG 392
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 273
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +HAPSIV D + + + L++ +D + + G
Sbjct: 274 AE--EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 323
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 381
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 86/239 (35%), Positives = 129/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 156 VHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AP ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 276 EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 336 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSG 392
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 273
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +HAPSIV D + + + L++ +D + + G
Sbjct: 274 AE--EHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 323
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 381
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 87/213 (40%), Positives = 122/213 (57%)
Query: 843 WDDVGGLT-DIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++D+GGL IQ + E I LP F + +R VLLYGPPG GKT + A AA
Sbjct: 169 YNDIGGLEKQIQELV-EAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQ 227
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ F+ + GP+L+ +IG + VRD F A +PC++F DE D+I KR D+
Sbjct: 228 TNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKR-FDSEVSG 286
Query: 962 DRVVN----QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE- 1016
DR V + L +LDG + V AAT+R D+LD AL+R GRLDR + +FP P E
Sbjct: 287 DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKI--EFPHPTEE 344
Query: 1017 -RLDILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
R IL++ SRK+ + DV+ E +A T+ F+G
Sbjct: 345 ARGRILQIHSRKMNVNADVNFEELARSTDDFNG 377
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 349 (127.9 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 85/239 (35%), Positives = 128/239 (53%)
Query: 820 MHEFLPVAMRD----ITKTSAEGG-RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+H + V M D +T E + + D+GGL + IKE +ELP P + +
Sbjct: 156 VHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMG 215
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ V+LYGPPG GKT + A A S F+ V G EL+ KY+G + VR++F A
Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275
Query: 935 AAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
P ++F DE D+I KR N+G R + + L +LDG + V V AT+R +
Sbjct: 276 EHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIE 335
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLD--ILKVISRKLPLADDVDLEAIAHMTEGFSG 1048
LD AL+RPGR+DR + +FP P E+ I ++ + ++ LADDV L+ + + SG
Sbjct: 336 TLDPALIRPGRIDRKI--EFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSG 392
Score = 126 (49.4 bits), Expect = 0.00025, P = 0.00025
Identities = 43/180 (23%), Positives = 78/180 (43%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP-IIRQALSNFI 648
P ++++GPPG+GKT LAKAVA +V + L GP ++R+ +
Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSA---TFLRVVGSELIQKYLGDGPKLVRELFR--V 273
Query: 649 SEALDHAPSIVIFDNLXXXXXXXXXXXXXXXXXXVIALTKFLVDIMDEYGEKRKSSCGIG 708
+E +H PSIV D + + + L++ +D + + G
Sbjct: 274 AE--EHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLE-LLNQLDGFDSR-------G 323
Query: 709 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 768
+ + + +E + +L GR D ++ P P +K I + R +L +D++ LD
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTL--ADDVTLD 381
WARNING: HSPs involving 421 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1134 1102 0.00088 123 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 671
No. of states in DFA: 627 (67 KB)
Total size of DFA: 464 KB (2219 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 96.65u 0.17s 96.82t Elapsed: 00:00:04
Total cpu time: 96.76u 0.17s 96.93t Elapsed: 00:00:04
Start: Tue May 21 07:31:56 2013 End: Tue May 21 07:32:00 2013
WARNINGS ISSUED: 2