BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001162
(1134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2
SV=2
Length = 1130
Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/1137 (62%), Positives = 863/1137 (75%), Gaps = 23/1137 (2%)
Query: 1 MELE--VRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGA 58
ME E V V GV +CFVSLP +L+ L+ST S+ L +L +ELRS ++RW VAWSG+
Sbjct: 14 METEAVVNTVAGV-DCFVSLPRQLLHALQSTSSSPLP-PLLPVELRS-GDRRWSVAWSGS 70
Query: 59 TSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAE 118
+SSSS IE+AR FAE ISL D T+V+VRV+ NV KATLVT+EP TEDDWEVLELN+E AE
Sbjct: 71 SSSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELNAELAE 130
Query: 119 AAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVK 178
AAIL+QVRI+HE M+FPLWLH RT+I F VVSTFP K VVQLVPGTEVAVAPKRR N+K
Sbjct: 131 AAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLK 190
Query: 179 KHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVAFINPETAENVS 238
+ + N KALLRVQ++D H+ +VKG EL VALTS+A+I+PETA+ S
Sbjct: 191 AKKSQEKECNN-----VKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHS 245
Query: 239 LCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSV 298
L SL+L+++ PR+ K + ++ A +K++ SK G S+ KKE RQA++ L+FSD
Sbjct: 246 LESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLA 305
Query: 299 AKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLE 358
AKGH+ + +LRLYL AGLHSWVYL+ C VN KEIP +SLSPC FK+ E +K G +
Sbjct: 306 AKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTD 365
Query: 359 -LDNKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEAVYQFENKKGLE 417
L N N K + Y+D D S D ++ ALSSE E +NKKGLE
Sbjct: 366 RLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHD----KNKKGLE 421
Query: 418 CLLHTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGALENKT 477
L W LAQL A+AS G + ++L++ ET HFEV+G +S S N E+
Sbjct: 422 YLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGK 481
Query: 478 KARELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSF 537
K + EI V+T S+ESL G K Y+L+L+ R ++++N + + K+N G+ +
Sbjct: 482 KDKHTPLEILYVMTVSDESLLGDKFAGYDLSLD-RSEKSDNVVHIEPVLEKMNLGEPIYL 540
Query: 538 YTVKERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHG 597
+ KE +G ++SSL+WMG SDVI R+ VLLSP +G+WFS + +P PGHILI+G
Sbjct: 541 KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG 600
Query: 598 PPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPS 657
PPGSGKT LA+A AK E KDL+AH++ V CS L+LEK I LS+ I+E L+HAPS
Sbjct: 601 PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS 660
Query: 658 IVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQ 717
++I D+LDSIISSSSD EG+Q S V LTKFL D++D+YGE R SSCGIGP+AFVAS Q
Sbjct: 661 VIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ 720
Query: 718 SLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYD 777
SLE+IPQ+L+SSGRFDFHVQL APA SER AIL+HEIQ+R L+CS++ILL++A+KC+GYD
Sbjct: 721 SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD 780
Query: 778 AYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAE 837
AYDLEILVDR VHAA+GR+L +S+ K+ LV++DF++AMH+F+PVAMRDITK+++E
Sbjct: 781 AYDLEILVDRAVHAAIGRHLPLESNISKY---NLVKEDFTRAMHDFVPVAMRDITKSASE 837
Query: 838 GGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
GGR GW+DVGG+TDI+NAIKEMIELPSKFP IFA++PLRLRSNVLLYGPPGCGKTHIVGA
Sbjct: 838 GGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGA 897
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA AAAPC+LFFDEFDSIAPKRGHDN
Sbjct: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDN 957
Query: 958 TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD ALLRPGRLDRLL CDFPSP ER
Sbjct: 958 TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPER 1017
Query: 1018 LDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNEPGK 1077
L+IL V+SRKL +ADD+DLE IA MTEGFSGADLQALLSDAQL+AVHE LN D E G
Sbjct: 1018 LEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPETGT 1077
Query: 1078 MPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAKGKRATLA 1134
P+ITD LLKSIASK +PSVSE EK +LY IY QFLDS+KS SR+AKGKRATLA
Sbjct: 1078 TPIITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKS----SREAKGKRATLA 1130
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/487 (45%), Positives = 309/487 (63%), Gaps = 26/487 (5%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +L+ G GSGK++LAKA+ K E L AH+ V C L ++ I++ L SE
Sbjct: 593 GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A+ PS+V+ D+LD I + PE +V + L L D++ E+ +G
Sbjct: 651 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-------ISMG 703
Query: 709 P-IAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLEC---- 761
+A +A++QS + + P +++ G F VQ P E++ + + + L+C
Sbjct: 704 SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763
Query: 762 -SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAM 820
+D L VA + G+ A D +LVDR +H+ + R S S+ EK + TL DF +A+
Sbjct: 764 FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSR--QSISTREKLVLTTL---DFQKAL 818
Query: 821 HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 880
FLP ++R + GWD +GGL +++ + + I+LP+K+P +FA P+R R+
Sbjct: 819 RGFLPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTG 876
Query: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 940
+LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCI 936
Query: 941 LFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRP 1000
LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRP
Sbjct: 937 LFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP 996
Query: 1001 GRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQL 1060
GRLD+ ++C P RL+IL V+S LPLADDVDL+ +A +T+ F+GADL+ALL +AQL
Sbjct: 997 GRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQL 1056
Query: 1061 SAVHEIL 1067
A+H +L
Sbjct: 1057 EALHGML 1063
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 33/188 (17%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIE------ 66
+CF+ LP +L+ L HLL NQ V WS + S++E
Sbjct: 26 DCFLHLPRRLVAQL------HLL-----------QNQAIEVVWSHQPAFLSWVEGRHFSD 68
Query: 67 -------VARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEA 119
+ RQ + + L++ V ++ S+V+ V +EPL+ DDWE+LEL++ E
Sbjct: 69 QGENVAEINRQVGQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQ 128
Query: 120 AILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NN 176
+L+Q+RIV FP+W+ +T I +V+ P +L T++ + PK R+ N
Sbjct: 129 HLLDQIRIVFPKAIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTRRAKENT 188
Query: 177 VKKHEDSY 184
K + Y
Sbjct: 189 FSKADAEY 196
>sp|Q5BL07|PEX1_MOUSE Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2
Length = 1284
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/486 (44%), Positives = 300/486 (61%), Gaps = 30/486 (6%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G +LI G GSGK++ AKA+ K E L A + V C L ++ I++AL SE
Sbjct: 594 GALLITGGKGSGKSTFAKAICK--EAQDTLDARVETVDCKALRGKRLESIQKALEVAFSE 651
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 708
A PS+++ D+LD I S PE +V + L L D++ E+ S G
Sbjct: 652 AAWRQPSVILLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEF-----VSTG-S 705
Query: 709 PIAFVASAQSLEKIPQSLTSS-GRFDF----HVQLPAPAASERKAILEHEIQRRSLECSD 763
+A +A++Q + + SL S+ G F H+Q P P E++ + H + + L C
Sbjct: 706 LVALIATSQLQQSLHPSLVSAQGIHTFQCVQHLQPPNP---EQRCEILHSVVKNKLGCDI 762
Query: 764 EILLDVASKC-----DGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQ 818
D+ +C + + A D +LVDR +H+++ R S TL DF +
Sbjct: 763 SNFPDLDLQCIAKDTEAFVARDFTVLVDRAIHSSLSRQHSSSRE-----DLTLTTSDFQK 817
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
A+ FLP ++R++ GWD +GGL +++ + + I+LP+K+P +FA P+R R
Sbjct: 818 ALRGFLPASLRNVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQR 875
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
+ +LLYGPPG GKT + G A + FIS+KGPELL+KYIGASEQAVRD+F +A AA P
Sbjct: 876 TGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKP 935
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALL 998
C+LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALL
Sbjct: 936 CILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALL 995
Query: 999 RPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDA 1058
RPGRLD+ ++C P RL+IL V+S+ L LADDVDL+ +A +T+ F+GADL+ALL +A
Sbjct: 996 RPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNA 1055
Query: 1059 QLSAVH 1064
QL A+
Sbjct: 1056 QLEALQ 1061
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 26/254 (10%)
Query: 13 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQ---RWVVAWSGATSSSSFIEVAR 69
+CF+ LP +L+ L HLL Q ++E+ S WV S + E+ R
Sbjct: 26 DCFLHLPRRLVAQL------HLL-QNQAIEVASDHQPTYLSWVEGRHFNDQSENVAEINR 78
Query: 70 QFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVH 129
Q + + L+ V +R S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV
Sbjct: 79 QVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILELHAISLEQHLLDQIRIVF 138
Query: 130 EAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NNVKKHEDSYMQ 186
P+W+ +T I +V+ P P +L T++ + PK R+ + K D++ Q
Sbjct: 139 PKAVVPIWVDQQTYIFIQIVTLMPAAPYGRLETNTKLLIQPKTRQAKESTFPKEGDAHGQ 198
Query: 187 AFN---ESTSIAKALL--RVQDSDEGLS----HKCNVKGVELG----VALTSVAFINPET 233
+ E ++K L ++ + EG++ V G L L S+ P++
Sbjct: 199 VHSYGREQKGLSKELQTRQLHTNSEGITASNGRDPKVPGGPLKPSWWAVLGSMLSFGPDS 258
Query: 234 AENVSLCSLELVAI 247
+ + SLEL A
Sbjct: 259 KQESAWGSLELGAF 272
>sp|Q54GX5|PEX1_DICDI Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1
PE=3 SV=1
Length = 1227
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/508 (40%), Positives = 305/508 (60%), Gaps = 34/508 (6%)
Query: 586 HLPLPG--HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQA 643
L PG ++I G GSGK+ LA ++ A I+ + C++L K IR+
Sbjct: 596 QLNTPGVNGMIIAGSHGSGKSLLATSLGGYYSTDSRSNAFIIKLDCNQLKELKVENIRKQ 655
Query: 644 LSNFISEALDHAPS---------------IVIFDNLDSIISSSSDPEGSQPSTSVIALTK 688
+ ++ + + I+I ++LD I+ + +D Q S I +
Sbjct: 656 FNKLFYKSCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPND----QDPGSKIRCEQ 711
Query: 689 FLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKA 748
+ I + + S I IA V S+QSL QS+ F ++L AP ER
Sbjct: 712 LVSHIKSLCFKYQNRSSPIVMIATVISSQSL---CQSIQIPELFGLTIELQAPTREERVE 768
Query: 749 ILEHEIQRRSLECSDEI---LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 805
ILE ++ + + D+ L+ ++ +GY D+E +VDR++H + + + ++++
Sbjct: 769 ILERYLKYQGKQLKDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNND 828
Query: 806 HIKPTLVRDDFS---QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIEL 862
+ + FS +A + P+ ++ I S+E W D+GGL ++ +KE IE
Sbjct: 829 DNDDDNIIE-FSIIEKAKEGYTPITLKGIKLHSSE---IKWQDIGGLDSVRAMLKETIEW 884
Query: 863 PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGAS 922
P+K+P +F +PLRLRS +LLYGP GCGKT + A A C L FISVKGPELLNKYIG+S
Sbjct: 885 PTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSS 944
Query: 923 EQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVF 982
EQ VRD+FS+A++A PC+LFFDEFDSIAP+RGHDN+GVTDRVVNQFLT+LDGVE LTGV+
Sbjct: 945 EQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVY 1004
Query: 983 VFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 1042
V AATSRPDL+D ALLRPGRLD+ L+C+ P ERLDIL + K+ L+ + LE ++
Sbjct: 1005 VLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTN 1064
Query: 1043 TEGFSGADLQALLSDAQLSAVHEILNNI 1070
T+ ++GADL+AL+ +AQL ++HE +N++
Sbjct: 1065 TQYYTGADLRALMYNAQLKSIHEWMNHL 1092
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 106/183 (57%), Gaps = 12/183 (6%)
Query: 1 MELEVRVVGGVENCFVSLPLKLIETL------ESTRSAHLLPQVLSLELRSRSNQRWVVA 54
MEL V++ + CFVSLP K++ +L +S L ++ + ++ + V
Sbjct: 1 MELHVQLKHSTD-CFVSLPPKIVHSLLLLSEKQSKSLGTLGLEITWYDKINKKENKGYVG 59
Query: 55 WSGATSSSSF---IEVARQFAECIS-LADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVL 110
W+G ++ F IE++++ A+C+ + + ++++ ++N+ A V +EPLT DDWE++
Sbjct: 60 WAGGSTDPRFTDSIEMSQEMAQCLGGIKNEQKLKLKALNNIELAHSVQVEPLTSDDWEIM 119
Query: 111 ELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAP 170
E++ ++ E +LNQV I++ P+W+H +TII V T P PVV+L +E+ VAP
Sbjct: 120 EVHQQYLEEQLLNQVNILYSGQIVPIWIHHKTIIKLKVTETLP-TPVVKLSSNSEIIVAP 178
Query: 171 KRR 173
K R
Sbjct: 179 KPR 181
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 33/177 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + L L IL++GP G GKT LA A+A C KGP +
Sbjct: 892 FQSSPLRLRSGILLYGPTGCGKTLLASAIAGE--------------CGLNFISVKGPELL 937
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + + S A P ++ FD DSI P ++ V +
Sbjct: 938 NKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIA-----PRRGHDNSGVTD------RV 986
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
++++ + G+ + +A+ + I +L GR D + P +ER IL
Sbjct: 987 VNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDIL 1043
>sp|P46463|PEX1_PICPA Peroxisome biosynthesis protein PAS1 OS=Komagataella pastoris GN=PEX1
PE=3 SV=1
Length = 1157
Score = 362 bits (930), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 300/527 (56%), Gaps = 61/527 (11%)
Query: 591 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 650
G L+ G GSGK+ + VA+ + + V + C ++ E +R + SE
Sbjct: 517 GGSLLFGTSGSGKSLVISQVAQIVTNKGHFVK---LLNCDKIMSESYNNLRGIFEDIFSE 573
Query: 651 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPI 710
APS++I ++LDS+I + + S S L+++ + + R I
Sbjct: 574 VSWKAPSLLILEDLDSLIPAEQEHSDSSQSRQ---LSEYFISKLSAQTINRD-------I 623
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSD-EILLDV 769
+AS++S E + + ++ + QL AP RK IL+ + ++ CS+ E+L ++
Sbjct: 624 TILASSKSKESLNSLIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNI 683
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIK--------------------- 808
A + +GY DL++L DR H + R + +DS E I+
Sbjct: 684 AVETEGYLPKDLKVLCDRAYHDLISRDILADSDSELDIEESSTPILNGSVGDIANKQSEI 743
Query: 809 -----------------------PTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDD 845
T+ +D+F A+ ++P ++R + ++ WDD
Sbjct: 744 ENGISGLELTNNSSSTIAVDKHGATIQKDNFDSALSGYIPQSLRGVKLQKSD---VRWDD 800
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+GGL D ++ + E +E P+K+ IF+ PLRLRS +LLYG PGCGKT + A AA C L
Sbjct: 801 IGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAAQCGLN 860
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 965
FIS+KGPE+LNKYIG SEQ+VR++F +A AA PC+LFFDEFDSIAPKRGHD+TGVTDRVV
Sbjct: 861 FISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVV 920
Query: 966 NQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVIS 1025
NQ LT++DG E L GV+V AATSRPDL+D+ALLRPGRLD+ + CD P +RLDIL+ ++
Sbjct: 921 NQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVT 980
Query: 1026 RKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDS 1072
R + ++ V+L ++A GFSGADLQAL +A L AVHE L +S
Sbjct: 981 RNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKLTKDES 1027
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 46 RSNQRWVV--AWSGA----TSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTI 99
R+ QR + W+G +SS+ IE+ R A I L ++ V V V + +KA V +
Sbjct: 49 RAAQRRIAYCGWAGGITKTSSSNPVIEIDRSLASAIDLQENVNVTVNVHIDAVKAITVEL 108
Query: 100 EPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHV------VSTFP 153
EP+T +DWE++E +++ E +LNQ R V+ ++ +T V VSTF
Sbjct: 109 EPVTSNDWEIVETHAQVLETYLLNQTRCVYPNQVLVVYPTPQTTARLLVKKIEPEVSTF- 167
Query: 154 KKPVVQLVPGTEVAVAPKRRK 174
QL TEV +APK +K
Sbjct: 168 ----AQLFNDTEVQIAPKVQK 184
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
FS+ L L IL++G PG GKT LA AVA C KGP I
Sbjct: 825 FSSCPLRLRSGILLYGYPGCGKTLLASAVAAQ--------------CGLNFISIKGPEIL 870
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q++ A P I+ FD DSI P+ ST V +
Sbjct: 871 NKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIA-----PKRGHDSTGVTD------RV 919
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
+++ + + G+ + +A+ + I +L GR D V P +R IL+
Sbjct: 920 VNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSV 979
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSF 803
R++ S + L VA +C G+ DL+ L AV L D S
Sbjct: 980 T--RNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKLTKDESM 1028
>sp|P24004|PEX1_YEAST Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX1 PE=1 SV=2
Length = 1043
Score = 328 bits (840), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 302/557 (54%), Gaps = 57/557 (10%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL----SLEKGPIIRQALSNFI 648
I++ G G GKT L K + +E KD + + C L +L+K ++ + +
Sbjct: 457 IILDGKQGIGKTRLLKELINEVE--KDHHIFVKYADCETLHETSNLDK---TQKLIMEWC 511
Query: 649 SEALDHAPSIVIFDNLDSII----SSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
S + PS+++ DN++++ ++ DP + + L F ++ + + K
Sbjct: 512 SFCYWYGPSLIVLDNVEALFGKPQANDGDPSNNGQWDNASKLLNFFINQVTKIFNKDNKR 571
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHV-----QLPAPAASERKAILEHEIQRRSL 759
I + S + +I L FD H L AP R +LE+ + +
Sbjct: 572 -----IRVLFSGKQKTQINPLL-----FDKHFVSETWSLRAPDKHARAKLLEYFFSKNQI 621
Query: 760 E--CSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFS 817
D D++ + +G+ DLEI ++ + D E+ + R+ FS
Sbjct: 622 MKLNRDLQFSDLSLETEGFSPLDLEIFTEKIFY---------DLQLERDCDNVVTRELFS 672
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+++ F P A+R + T + W D+G L + ++ + E +E P+K+ IF PLRL
Sbjct: 673 KSLSAFTPSALRGVKLTKETNIK--WGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRL 730
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
RS +LLYG PGCGKT + A A C L FISVKGPE+LNK+IGASEQ +R++F +A +
Sbjct: 731 RSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVK 790
Query: 938 PCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAAL 997
PC+LFFDEFDSIAPKRGHD+TGVTDRVVNQ LT++DG E L GV++ AATSRPDL+D+AL
Sbjct: 791 PCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSAL 850
Query: 998 LRPGRLDRLLFCDFPSPRERLDILKVI---------SRKLPLADDVDLEAIAHMTEGFSG 1048
LRPGRLD+ + C+ P+ ERLDIL+ I +K L + DL+ IA T GFSG
Sbjct: 851 LRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSG 910
Query: 1049 ADLQALLSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSI 1108
ADLQ L +A L +VH L+ D +E +P + SI R E +LRL ++
Sbjct: 911 ADLQGLCYNAYLKSVHRWLSAADQSEV--VPGNDNIEYFSINEHGR---REENRLRLKTL 965
Query: 1109 YGQFL--DSKKSVAAQS 1123
Q + ++K S +A S
Sbjct: 966 LQQDVVHETKTSTSAAS 982
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 12/187 (6%)
Query: 3 LEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVV--AWSGATS 60
L ++ + F+ LP +I LEST A Q + + S ++ +V W G S
Sbjct: 12 LRIQFSNAIVGNFLRLPHSIINVLESTNYA---IQEFGIAVHSHNSDIPIVHLGWDGHDS 68
Query: 61 SSS--FIEVARQFAECISLADHTIV---QVRVVSNVLKATLVTIEPLTEDDWEVLELNS- 114
SS + + A L + + ++ + AT V + P T DDWE+++ N+
Sbjct: 69 GSSENVVLINPVLATVYDLNQKSPLVDLYIQRYDHTHLATEVYVTPETSDDWEIIDANAM 128
Query: 115 EHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK 174
IL+Q RIV +L G + F + P ++ G+ V VAPK K
Sbjct: 129 RFQNGEILHQTRIVTPGETLICYLEG-IVTKFKIDRVEPSMKSARITDGSLVVVAPKVNK 187
Query: 175 NNVKKHE 181
+ K E
Sbjct: 188 TRLVKAE 194
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F L L IL++G PG GKT LA AVA+ C KGP I
Sbjct: 723 FVNCPLRLRSGILLYGYPGCGKTLLASAVAQQ--------------CGLNFISVKGPEIL 768
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q + A P I+ FD DSI P+ ST V +
Sbjct: 769 NKFIGASEQNIRELFERAQSVKPCILFFDEFDSIA-----PKRGHDSTGVTD------RV 817
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
+++ + + G+ + +A+ + I +L GR D V P SER IL+
Sbjct: 818 VNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAI 877
Query: 754 IQRR---------SLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL 797
+ + +LE + ++ L +A K G+ DL+ L +V R+L
Sbjct: 878 VNSKDKDTGQKKFALEKNADLKL-IAEKTAGFSGADLQGLCYNAYLKSVHRWL 929
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat PE=1
SV=1
Length = 745
Score = 317 bits (811), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 202/553 (36%), Positives = 300/553 (54%), Gaps = 42/553 (7%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P ++++GPPG+GKT +A+AVA + A+ + + + +
Sbjct: 216 FERLGITPPKGVILYGPPGTGKTLIARAVAN------ESGANFLSINGPEIMSKYYGQSE 269
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q L S+A + APSI+ D +DSI + +G + V+A L+D M E G
Sbjct: 270 QKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQG-EVERRVVAQLLTLMDGMKERGH-- 326
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+ + + ++ I +L GRFD +++ P + RK IL + L
Sbjct: 327 --------VIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGM 378
Query: 762 SDE----ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS---DSSFEKHI--KPTLV 812
S+E L ++A G+ DL LV + A+ RYL D I K +
Sbjct: 379 SEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVT 438
Query: 813 RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQ 872
DDF A+ P ++R++ E WDD+GGL D++ IKE +ELP P++F +
Sbjct: 439 EDDFKNALKSIEPSSLREVM---VEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKR 495
Query: 873 APLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSK 932
+R LLYGPPG GKT + A A + FIS+KGPE+L+K++G SE+A+R+IF K
Sbjct: 496 LGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKK 555
Query: 933 ATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
A AP ++F DE DSIAP+RG ++GVT+R+VNQ LT LDG+EV+ GV V AT+RPD
Sbjct: 556 AKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPD 615
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D ALLR GR D+L++ P RL ILKV ++ +PLA DVDL IA TEG+ GADL
Sbjct: 616 IMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADL 675
Query: 1052 QALLSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQ 1111
+ L +A ++A E N D+ + + DA LK+I RPSV E E ++ Y +
Sbjct: 676 ENLCREAGMNAYRE---NPDATSVSQKNFL-DA-LKTI----RPSVDE-EVIKFYRTLSE 725
Query: 1112 FLDSKKSVAAQSR 1124
+ KSV+ + +
Sbjct: 726 TMS--KSVSERRK 736
Score = 196 bits (499), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 145/244 (59%), Gaps = 5/244 (2%)
Query: 837 EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 896
E R ++D+GGL++ I+EMIELP K P +F + + V+LYGPPG GKT I
Sbjct: 183 EVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIAR 242
Query: 897 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 956
A A F+S+ GPE+++KY G SEQ +R+IFSKA AP ++F DE DSIAPKR
Sbjct: 243 AVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEV 302
Query: 957 NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 1016
V RVV Q LT +DG++ V V AT+R D +D AL RPGR DR + P
Sbjct: 303 QGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNG 362
Query: 1017 RLDILKVISRKLPLADDVD-----LEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
R +IL + +R +PL + LE +A T GF GADL AL+ ++ ++A+ L ID
Sbjct: 363 RKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEID 422
Query: 1072 SNEP 1075
++P
Sbjct: 423 LDKP 426
>sp|O74941|PEX1_SCHPO Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex1 PE=3 SV=1
Length = 937
Score = 315 bits (808), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 279/482 (57%), Gaps = 20/482 (4%)
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEA 651
+I I+GP G GK++L ++ + + + + V CS + + +N +A
Sbjct: 374 NIYINGPKGCGKSNLVHSLFDY--YSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQA 431
Query: 652 LDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIA 711
+ PSI+ D++ +ISSS+ E + FL + KRK I
Sbjct: 432 ERYEPSIIYLDDVHCLISSSN--ENGELGFVEEREIAFLQHQIINLKRKRK-------II 482
Query: 712 FVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVAS 771
F+ + ++L F + LP+ A + RK IL Q + + + + ++
Sbjct: 483 FIGFGEEFLTFSENLVLPLLFQIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEFISV 542
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDI 831
K +GY DL + V R + A ++ + KH+ + + + + +F+P+ +R
Sbjct: 543 KTEGYLMTDLVLFVKRLLSEA---FVEKIQNGPKHL---MNKGLIEKTLKDFVPLQLR-- 594
Query: 832 TKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGK 891
K W D+ G+ + + A++++IE P K+ I+ Q LRL + +LL+G PGCGK
Sbjct: 595 -KAKFVKSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGK 653
Query: 892 THIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAP 951
T++ A ++ ++FIS+KGPELL+KYIG SEQ VRD+FS+A A PC+LFFDEFDS+AP
Sbjct: 654 TYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAP 713
Query: 952 KRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDF 1011
+RG D+TGVTDRVVNQ LT++DG E L GV++ AAT+RPD++D ALLRPGRLD+L+FCD
Sbjct: 714 RRGQDSTGVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDL 773
Query: 1012 PSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
P+ ERL++L+ ++ + + + L+ ++ +T+G++ ADL +LL DA L AVH++L +
Sbjct: 774 PNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVS 833
Query: 1072 SN 1073
N
Sbjct: 834 IN 835
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 10 GVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVAR 69
+ +C V++P L+E++ + + V+ ++ + + SG S SF E+
Sbjct: 9 SLRSCLVNVPELLLESISEPVQNYAVQAVVC---KNDIKKTFYFGISGIPSQFSF-EIDS 64
Query: 70 QFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVH 129
+A + LA++ + + ++ + + IEP+T +DWE+ E N+ E +L Q R V
Sbjct: 65 TYAHTLKLAENQEINLSIIDCTHEIEQLEIEPVTSNDWEIAERNAAWLEENLLVQYR-VA 123
Query: 130 EAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVKKHED 182
RF ++L T I F + P +L+ TEV + PK + ++ E+
Sbjct: 124 TTERFIIYLPSGTFIQFQPLKLIPSSLCGRLLRTTEVLITPKPNTSAIEVKEN 176
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 579 GLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP 638
L + L LP IL+ G PG GKT LA A++ + + F+ KGP
Sbjct: 629 SLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFP--------VQFISI------KGP 674
Query: 639 II--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 690
+ Q + + S A P ++ FD DS+ P Q ST V
Sbjct: 675 ELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVA-----PRRGQDSTGVTD----- 724
Query: 691 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 750
++++ + + + + VA+ + I +L GR D + P ER +L
Sbjct: 725 -RVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVL 783
Query: 751 EHEIQRRSLECSDEILLDVASKCDGYDAYDLEILV 785
+ R +E + +L +++ DGY DL L+
Sbjct: 784 QKLANRFHIE-NAAMLKKLSTLTDGYTYADLSSLL 817
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628
/ NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 315 bits (807), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 294/537 (54%), Gaps = 50/537 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L++GPPG+GKT +AKAVA ++ H F+ S GP I
Sbjct: 208 FQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAH--------FIPIS------GPEIM 253
Query: 641 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 693
Q L EA ++APSI+ D +DSI + G + V+A L+D
Sbjct: 254 SKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTG-EVERRVVAQLLALMDG 312
Query: 694 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 753
++ G+ + +A+ + I +L GRFD +++ P RK ILE
Sbjct: 313 LEARGD----------VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILE-- 360
Query: 754 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV 812
I R + ++++ L ++A +G+ DLE L A+ R L + I ++
Sbjct: 361 IHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVI 420
Query: 813 ------RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKF 866
R+DF +A+ P AMR++ E W+D+GGL + + E +E P K+
Sbjct: 421 ENLKVTREDFMEALKNIEPSAMREVL---VEVPNVKWEDIGGLEHAKQELMEAVEWPLKY 477
Query: 867 PNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAV 926
P +F A ++ +LL+GPPG GKT + A A + FISVKGPELL+K++G SE+ V
Sbjct: 478 PEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHV 537
Query: 927 RDIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
R++F KA APC++FFDE DS+AP+RG ++ VT+RVV+Q LTELDG+E L V V A
Sbjct: 538 REMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIA 597
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 1045
AT+RPD++D ALLRPGRL+R ++ P + R++I K+ R PLADDV++E +A TEG
Sbjct: 598 ATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEG 657
Query: 1046 FSGADLQALLSDAQLSAVHEI----LNNIDSNEPGKMPVITDALLKSIASKARPSVS 1098
+SGAD++A+ +A + A+ E+ + ++ E K IT + K RPS++
Sbjct: 658 YSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLT 714
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 144/229 (62%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GGL ++EMIELP K P +F + + VLLYGPPG GKT I A A
Sbjct: 181 YEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEV 240
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
FI + GPE+++KY G SEQ +R+IF +A AP ++F DE DSIAPKR V
Sbjct: 241 DAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER 300
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
RVV Q L +DG+E V V AAT+RPD +D AL RPGR DR + P R +IL+
Sbjct: 301 RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILE 360
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
+ +RK+PLA+DVDLE +A +T GF GADL+AL +A + A+ +L ID
Sbjct: 361 IHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEID 409
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 311 bits (796), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 272/492 (55%), Gaps = 30/492 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P +L+ GPPG+GKT LAKAVA + A+ + + +
Sbjct: 205 FEKLGIEPPKGVLLVGPPGTGKTLLAKAVAN------EAGANFYVINGPEIMSKYVGETE 258
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+ L EA ++APSI+ D +D+I + G L L+ +MD
Sbjct: 259 ENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERR----LVAQLLTLMD------ 308
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
G G + + + + +L GRFD + + P RK IL+ I R++
Sbjct: 309 -GLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQ--IHTRNMPL 365
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHS-DSSFEKHIKPTL-----VRD 814
++++ LD +A G+ DL L A+ R L S D E+ K L D
Sbjct: 366 AEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMD 425
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF +A+ + P AMR++ E W+D+GGL +++ ++E +E P K +F +
Sbjct: 426 DFKEALKDVEPSAMREVL---VEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIG 482
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+R VLL+GPPG GKT + A A FISVKGPE+ +K++G SE+A+R+IF KA
Sbjct: 483 VRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKAR 542
Query: 935 AAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+APC++FFDE D+IAPKRG D ++ VTD+VVNQ LTELDG+E V V AAT+RPD++
Sbjct: 543 QSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDII 602
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQA 1053
D ALLRPGRLDR++ P + RLDI K+ +R + LA+DV+LE +A TEG++GAD++A
Sbjct: 603 DPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEA 662
Query: 1054 LLSDAQLSAVHE 1065
L +A + AV E
Sbjct: 663 LCREAAMLAVRE 674
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 142/229 (62%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
++D+GGL + ++EMIELP + P +F + + VLL GPPG GKT + A A
Sbjct: 178 YEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEA 237
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
F + GPE+++KY+G +E+ +R IF +A AP ++F DE D+IAPKR V
Sbjct: 238 GANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVER 297
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R+V Q LT +DG++ V V AT+RP+ LD AL RPGR DR + P R +IL+
Sbjct: 298 RLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQ 357
Query: 1023 VISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
+ +R +PLA+DVDL+ +A +T GF GADL AL +A + A+ +L +ID
Sbjct: 358 IHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSID 406
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639
/ JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3 SV=2
Length = 780
Score = 307 bits (786), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/502 (35%), Positives = 284/502 (56%), Gaps = 32/502 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT LA+A+A ++ A+ + V + +
Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALAN------EIGAYFITVNGPEIMSKFYGESE 291
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q + EA ++APSI+ D +D+I D G + V+A L+ +MD G K
Sbjct: 292 QRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTG-EVEKRVVAQ---LLTLMD--GIK- 344
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
G G + + + + I +L GRFD +++ P RK IL+ + R++
Sbjct: 345 ----GRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQ--VHTRNMPI 398
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDS-SFEKHIKPTLVRDDFSQA 819
+D++ LD +A GY DL L A+ R++ + ++ P + + +
Sbjct: 399 TDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAEIIKELKVS 458
Query: 820 MHEFL-------PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQ 872
M++FL P +R++ E + W+D+GGL +++ ++E +E P +FP +F +
Sbjct: 459 MNDFLNALKSIQPSLLREV---YVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTK 515
Query: 873 APLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSK 932
+ + +LL+GPPG GKT + A A FI+V+GPE+L+K++G SE+A+R+IF K
Sbjct: 516 SGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRK 575
Query: 933 ATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
A AAP ++FFDE DSIAP RG ++GVT+R+VNQ L E+DG+ L V + AAT+RPD
Sbjct: 576 ARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPD 635
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
+LD ALLRPGR DRL++ P R +ILKV ++ +PLA+DV LE IA EG++GADL
Sbjct: 636 ILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADL 695
Query: 1052 QALLSDAQLSAVHEILNNIDSN 1073
+AL+ +A ++A+ I + D
Sbjct: 696 EALVREATINAMRSIYSMCDKQ 717
Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 145/227 (63%), Gaps = 2/227 (0%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
W+D+G L + + I+E++E P + P +F + + +LLYGPPG GKT + A A
Sbjct: 211 WEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEI 270
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG-VT 961
FI+V GPE+++K+ G SEQ +R+IF +A AP ++F DE D+IAPKR D TG V
Sbjct: 271 GAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKR-EDVTGEVE 329
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV Q LT +DG++ V V AT+RPD +D AL RPGR DR + P + R DIL
Sbjct: 330 KRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDIL 389
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILN 1068
+V +R +P+ DDVDL+ +A MT G++GADL AL +A + A+ ++
Sbjct: 390 QVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVD 436
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 296 bits (759), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 183/496 (36%), Positives = 273/496 (55%), Gaps = 32/496 (6%)
Query: 581 WFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII 640
FS++ + P IL+HGPPG+GKT L + VA + AH++ + + +
Sbjct: 270 LFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSN------AHVLTINGPSIVSKYLGET 323
Query: 641 RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEK 700
AL + +EA + PSI+ D +DSI + ++ + + + V+A L+ +MD G
Sbjct: 324 EAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVAT---LLTLMDGMG-- 378
Query: 701 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE 760
G + +A+ + +L GRFD V++ P R IL + R S
Sbjct: 379 -----AAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMS-- 431
Query: 761 CSDEILLD------VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH-IKPTLVR 813
SD +LD +ASK GY DL L +V + R L +D++ +K +K TL
Sbjct: 432 -SDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTL-- 488
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
D AM + P AMR+I E + W D+GG +++ +KEMI+LP + FA+
Sbjct: 489 KDVESAMVDIRPSAMREIF---LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARL 545
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
+ VLLYGPPGC KT A A + F++VKGPE+ NKY+G SE+A+R+IF KA
Sbjct: 546 GISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKA 605
Query: 934 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 993
+AAP ++FFDE D+++P R +T + V+ L E+DGVE L GV + AAT+RPD +
Sbjct: 606 RSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEI 665
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADD-VDLEAIAHMTEGFSGADLQ 1052
DAALLRPGRLDR ++ P RL+ILK ++K + VDL +A TEG+SGA++
Sbjct: 666 DAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVV 725
Query: 1053 ALLSDAQLSAVHEILN 1068
L +A L+A+ E L+
Sbjct: 726 LLCQEAGLAAIMEDLD 741
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 295 bits (754), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 193/552 (34%), Positives = 284/552 (51%), Gaps = 57/552 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 640
F + P +L+HGPPG+GKT LAKAVA S S+ II
Sbjct: 215 FQKLGIEPPQGVLLHGPPGTGKTLLAKAVANE-------------TSASFFSIAGPEIIS 261
Query: 641 ------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIM 694
Q L +A D +PSI+ D LDSI D G + V+A ++D +
Sbjct: 262 KYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTG-EVERRVVAQLLTMMDGL 320
Query: 695 DEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI 754
+ G G + +A+ ++ + +L GRFD +++ P R+ IL+ I
Sbjct: 321 E----------GRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILK--I 368
Query: 755 QRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV- 812
R + SD++ L +A G+ D+E L A+ RYL E+ I P+L+
Sbjct: 369 HTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLID 428
Query: 813 -----RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFP 867
R+DF A+ E P AMR++ E + WDDVGGLT+ +N +KE +E P P
Sbjct: 429 RMIVKREDFKGALSEVEPSAMREVL---VELPKITWDDVGGLTEAKNNVKESVEWPLNQP 485
Query: 868 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 927
F + + + VLLYGPPG GKT + A A + FISV+GP+LL+K++G SE+A+R
Sbjct: 486 EKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIR 545
Query: 928 DIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F KA AP ++FFDE DS+AP RG V++RVVNQ LTELDG+E + V V AA
Sbjct: 546 QTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAA 605
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
T+RPD++D AL+R GR DRL+ P R ILK+ ++ PLA DV L +A +G+
Sbjct: 606 TNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGY 665
Query: 1047 SGADLQALLSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLY 1106
G+DL + +A + A+ ++ D+++ G A ++ RP++++ L
Sbjct: 666 VGSDLANIAREAAIEALR---DDEDADDVGM------AHFRAAMENVRPTITDD----LM 712
Query: 1107 SIYGQFLDSKKS 1118
Y Q D K
Sbjct: 713 EYYDQVEDQFKG 724
Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 2/250 (0%)
Query: 838 GGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
GG ++D+GGL + ++EM+ELP K P IF + + VLL+GPPG GKT + A
Sbjct: 183 GGGITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKA 242
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 957
A S F S+ GPE+++KY G SEQ +R+IF A +P ++F DE DSIAPKR D
Sbjct: 243 VANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR-EDV 301
Query: 958 TG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 1016
TG V RVV Q LT +DG+E V V AAT+R D +D AL RPGR DR + P
Sbjct: 302 TGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIG 361
Query: 1017 RLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNEPG 1076
R +ILK+ +R +PL+DDV+L +A T GF GAD+++L +A + A+ L ID +E
Sbjct: 362 REEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEED 421
Query: 1077 KMPVITDALL 1086
P + D ++
Sbjct: 422 IPPSLIDRMI 431
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 293 bits (749), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 175/491 (35%), Positives = 272/491 (55%), Gaps = 26/491 (5%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQSEVEKRVVASLLT-LMDGIG--- 485
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDF 816
+ LL +A+ GY DL+ L + A+ R L DS +K TL +DF
Sbjct: 545 TKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITL--NDF 602
Query: 817 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 876
Q M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F + ++
Sbjct: 603 LQGMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQ 659
Query: 877 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 936
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 937 APCLLFFDEFDSIAPKRGHDNTG--VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
AP ++FFDE D++A +RG + V DRV+ Q LTE+DG+E L V V AAT+RPD +D
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Query: 995 AALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQAL 1054
AL+RPGR+DR+++ P R +IL + +P++++VDL+ + T+ +SGA++ A+
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAV 839
Query: 1055 LSDAQLSAVHE 1065
+A L A+ E
Sbjct: 840 CKEAALLALEE 850
Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 150/262 (57%), Gaps = 9/262 (3%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL AI+E+IELP K P +F + +LLYGPPG GKT I A A
Sbjct: 352 YDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEV 411
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR + V
Sbjct: 412 GAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEK 471
Query: 963 RVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
RVV LT +DG+ E G V V AT+RP LDAAL RPGR D+ + P+ ++RLD
Sbjct: 472 RVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLD 531
Query: 1020 ILKVISRKLP-LADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEIL----NNIDSNE 1074
IL+ + R++P L +L +A+ G+ GADL+AL ++A L A+ +L N DS
Sbjct: 532 ILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKV 591
Query: 1075 PGKMPVITDALLKSIASKARPS 1096
G + + + L+ + + RPS
Sbjct: 592 AGMVKITLNDFLQGM-NDIRPS 612
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 289 bits (740), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 268/489 (54%), Gaps = 22/489 (4%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEAKLR 436
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQNEVEKRVVASLLT-LMDGIG--- 485
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLL 544
Query: 762 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR---DDFSQ 818
++ LL +A+ GY DL++L + A+ R L + LV+ DF Q
Sbjct: 545 TEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLKDFLQ 604
Query: 819 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
AM++ P AMR+I + + W D+GGL I+ +++ +E P K P F + ++
Sbjct: 605 AMNDIRPSAMREI---AIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPP 661
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+ F KA A AP
Sbjct: 662 KGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAP 721
Query: 939 CLLFFDEFDSIAPKRGHD--NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 996
++FFDE D++A +RG V DRV+ Q LTE+DG+E L V + AAT+RPD +D A
Sbjct: 722 SIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKA 781
Query: 997 LLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLS 1056
L+RPGR+DR+++ P R +I K+ +P++++VDL+ + T+ +SGA++ A+
Sbjct: 782 LMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCR 841
Query: 1057 DAQLSAVHE 1065
+A L A+ E
Sbjct: 842 EAALLALEE 850
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 137/229 (59%), Gaps = 4/229 (1%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+D +GGL+ AI+E+IELP K P +F + VLLYGPPG GKT I A A
Sbjct: 352 YDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEV 411
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR V
Sbjct: 412 GAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEK 471
Query: 963 RVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
RVV LT +DG+ EV G V V AT+RP LDAAL RPGR D+ + P+ ++RLD
Sbjct: 472 RVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLD 531
Query: 1020 ILKVISRKLP-LADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEIL 1067
IL+ + R++P L + +L +A+ G+ GADL+ L ++A L A+ IL
Sbjct: 532 ILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRIL 580
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 298/572 (52%), Gaps = 47/572 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ + VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVD++ +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADL 687
Query: 1052 QALLSDAQLSAVHEILNNIDSNE------PGKMPVITDALLKSIASK--------ARPSV 1097
+ A A+ E + N E P M V D + I AR SV
Sbjct: 688 TEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSV 747
Query: 1098 SEAEKLRLYSIYGQFLDSKKSVAAQSRDAKGK 1129
S+ + +R Y ++ Q L + + A G+
Sbjct: 748 SDND-IRKYEMFAQTLQQSRGFGSFRFPAGGQ 778
Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 140/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + L+DDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 291/568 (51%), Gaps = 48/568 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 227 FKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 284
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +D+I G + L+ +MD G K+
Sbjct: 285 KAFE----EAEKNSPAIIFIDEIDAIAPKRDKTHGEVERR----IVSQLLTLMD--GMKK 334
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S + +A+ I +L GRFD + + P A+ R +L I ++++
Sbjct: 335 SSH-----LIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLR--IHTKNMKL 387
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
D++ L+ +A++ G+ DL L + + D + + +L +
Sbjct: 388 HDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTME 447
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F AM + P A+R+ T E + W D+GGL ++ ++E+++ P + P+ F +
Sbjct: 448 NFRYAMTKSSPSALRE---TVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFG 504
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FISVKGPELL + G SE VRDIF KA
Sbjct: 505 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKAR 564
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
+AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 565 SAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPD 624
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P + R ILK RK PLA +VDL IA +T+GFSGADL
Sbjct: 625 IIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADL 684
Query: 1052 QALLSDAQLSAVHEIL---------------NNIDSNEPGKMPVITDALLKSIASKARPS 1096
+ A A+ + + + +D +E +P IT A + AR S
Sbjct: 685 TEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRS 744
Query: 1097 VSEAEKLRLYSIYGQFLDSKKSVAAQSR 1124
VS+ + +R Y ++ Q L + R
Sbjct: 745 VSDND-IRKYEMFAQTLQQSRGFGQNFR 771
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 139/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P++F ++ +L+YGPPG GKT I A A
Sbjct: 199 GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE 258
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE D+IAPKR + V
Sbjct: 259 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVE 318
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ + + V AAT+RP+ +D AL R GR DR + P RL++L
Sbjct: 319 RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVL 378
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + L DDVDLE IA + G GADL +L S+A L + E ++ ID
Sbjct: 379 RIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLID 428
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 283 bits (725), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 291/564 (51%), Gaps = 47/564 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDL+ +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADL 687
Query: 1052 QALLSDAQLSAVHE------ILNNIDSNEPGKMPVITDALLKSIASK--------ARPSV 1097
+ A A+ E P M V D + I AR SV
Sbjct: 688 TEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSV 747
Query: 1098 SEAEKLRLYSIYGQFLDSKKSVAA 1121
S+ + +R Y ++ Q L + +
Sbjct: 748 SDND-IRKYEMFAQTLQQSRGFGS 770
Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 140/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + L+DDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 1052 QALLSDA 1058
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp
PE=1 SV=3
Length = 806
Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 1052 QALLSDA 1058
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1
SV=4
Length = 806
Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 1052 QALLSDA 1058
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1
SV=4
Length = 806
Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 1052 QALLSDA 1058
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1
SV=1
Length = 806
Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 290/564 (51%), Gaps = 47/564 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P + R+ ILK RK P++ DVDL+ +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADL 687
Query: 1052 QALLSDAQLSAVHE------ILNNIDSNEPGKMPVITDALLKSIASK--------ARPSV 1097
+ A A+ E P M V D + I AR SV
Sbjct: 688 TEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSV 747
Query: 1098 SEAEKLRLYSIYGQFLDSKKSVAA 1121
S+ + +R Y ++ Q L + +
Sbjct: 748 SDND-IRKYEMFAQTLQQSRGFGS 770
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 141/230 (61%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 300/550 (54%), Gaps = 42/550 (7%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L++GP G GK +L VAK + H+ V C +L + N + +A
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMG------IHVYEVDCYKLYDFVESKKDWNIRNVLEQAS 723
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIG--PI 710
+ P+++I N + + ++ + + ++ L++ L++I+ + + S+ P+
Sbjct: 724 NSTPTLLILKNFEVLEQTAQSMQQEKKESN---LSQTLINILKDINDSNTSNINSNKYPL 780
Query: 711 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDV 769
+ S++++ + F + L +P ++R IL++ + ++ + + + ++
Sbjct: 781 IITVTVNSMDELSNKV--RNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNL 838
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--------LVRDDFSQAMH 821
+ + + +L L+ R+ A+ R L IKP ++ DD +++
Sbjct: 839 SIRTASFLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLS 898
Query: 822 EFLPVAMRDITKTSAEGGR---SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
E M++ +S + WDDVGGL ++++ I + I+LP + P++FA + R
Sbjct: 899 E-----MQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASG-IGKR 952
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N YIG SE+ +R+IF+KA A P
Sbjct: 953 SGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKP 1012
Query: 939 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 996
C++FFDE DS+AP RG+ D+ GV DRVV+Q L ELDG++ + VF+ AT+RPDLLD++
Sbjct: 1013 CVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSS 1072
Query: 997 LLRPGRLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDL-EAIAHMTEGFSGADLQAL 1054
L+RPGRLDRLL+ S +E + IL+ ++RK LADDVDL + + + +GAD AL
Sbjct: 1073 LMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYAL 1132
Query: 1055 LSDAQLSAVHE-----ILNNIDSNEPG-KMPVITDALLKSIASKARPSVSEAEKLRLYSI 1108
SDA +A HE I I+ E K+ V + +K++ S PSVS E + +
Sbjct: 1133 ASDAMSNAFHERITASINGEINEEEQNQKLIVYQNHFIKAVNSLV-PSVSLDELEYYHKV 1191
Query: 1109 YGQFLDSKKS 1118
QF + KS
Sbjct: 1192 QKQFSGNNKS 1201
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 280 bits (716), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 194/574 (33%), Positives = 284/574 (49%), Gaps = 60/574 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERR----IVSQLLTLMD 336
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 811 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVSNEHFHTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 504
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 624
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 1045
AT+RPD++D+ALLRPGRLD+L++ P RL+I K RK P+A DVD+ A+A T+G
Sbjct: 625 ATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQG 684
Query: 1046 FSGADLQALLSDAQLSAVHEILNNIDSNE------PGKM---------PVITDALLKSIA 1090
FSGAD+ + A A+ E + NE P M I A +
Sbjct: 685 FSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESM 744
Query: 1091 SKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSR 1124
AR SVS+A+ +R Y + Q L + ++ R
Sbjct: 745 KYARRSVSDAD-IRKYQAFAQTLQQSRGFGSEFR 777
Score = 189 bits (481), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 139/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LA+DVDLE I+ T G+ GADL AL ++A L + E ++ ID
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 280 bits (716), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 180/487 (36%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
DF A+ + P A+R+ T E + W+D+GGL D++ ++++++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFG 507
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 935 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 1052 QALLSDA 1058
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 276 bits (706), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 282/572 (49%), Gaps = 58/572 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLG--IH 388
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++E+ L+ SK GY DL L + + D + + + +
Sbjct: 389 TKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTIDAEVLNS 448
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 1045
AT+RPD++D ALLRPGRLD+L++ P R I K RK PL+ D+DL A+A T+G
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQG 685
Query: 1046 FSGADLQALLSDAQLSAVHEIL-----------NNIDS--NEPGKMPVITDALLKSIASK 1092
FSGAD+ + A A+ E + N DS + ++P I A +
Sbjct: 686 FSGADVTEICQRACKYAIRENIEKDIEREKRRQENPDSMDEDVDEVPEIKPAHFEESMKY 745
Query: 1093 ARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSR 1124
AR SVS+A+ +R Y + Q L + + R
Sbjct: 746 ARRSVSDAD-IRKYQAFAQTLQQSRGFGTEFR 776
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 138/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVL 385
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
+ ++ + LA++VDLE I+ T G+ GADL AL ++A L + E ++ +D
Sbjct: 386 GIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLD 435
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 281/574 (48%), Gaps = 60/574 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR--IH 388
Query: 756 RRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ SD++ L+ +A GY DL L + + D + + + +
Sbjct: 389 TKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNS 448
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIG 625
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 1045
AT+RPD++D ALLRPGRLD+L++ P R I K RK P+A +VDL A+A T+G
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQG 685
Query: 1046 FSGADLQALLSDAQLSAVHE-ILNNIDSNEPGK--------------MPVITDALLKSIA 1090
FSGAD+ + A A+ E I +I+ + + I A +
Sbjct: 686 FSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESM 745
Query: 1091 SKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSR 1124
AR SVS+A+ +R Y + Q L + ++ R
Sbjct: 746 KFARRSVSDAD-IRKYQAFAQTLQQSRGFGSEFR 778
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 139/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVL 385
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + L+DDVDLE IA T G+ GADL AL ++A L + E ++ ID
Sbjct: 386 RIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID 435
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 270/535 (50%), Gaps = 44/535 (8%)
Query: 546 TQGFDSNVSSLSWM---GTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSG 602
TQ FD S++++ G A R V L + F +++ P +L++GPPG+G
Sbjct: 266 TQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTG 325
Query: 603 KTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQALSNFISEALDH 654
KT + +AVA VF GP + L +A H
Sbjct: 326 KTMVMRAVAAEANAQ-------VFTI-------DGPSVVGKYLGETESRLRKIFEDARAH 371
Query: 655 APSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVA 714
PSI+ D +D++ ++ + S+ + +A L+D M G + +A
Sbjct: 372 QPSIIFIDEIDALAPKRTE-DVSEAESRAVATLLTLLDGM----------ANAGKVVVIA 420
Query: 715 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCD 774
+ I ++L GR + +++ P S R I++ + E +D L D+AS+
Sbjct: 421 ATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTH 480
Query: 775 GYDAYDLEILVDRTVHAAVGRY--LHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDIT 832
Y DL +V A+ R L D+S I + DD A+ AMR+
Sbjct: 481 AYVGADLAAVVREAALRAIKRTISLQKDTS-GLDIFGAVQMDDLEFALSSVRQSAMREFM 539
Query: 833 KTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKT 892
E W D+GG +++ +KE +E P F++ +R VLLYGPPGC KT
Sbjct: 540 ---MESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKT 596
Query: 893 HIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPK 952
A A L FI+VKGPEL +K++G SE+AVR +F KA A+P ++FFDE D++
Sbjct: 597 ITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTAN 656
Query: 953 RGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFP 1012
RG DN+ +DRVV L ELDG+E L V V AAT+RPD++D AL+RPGRLDRLL+ P
Sbjct: 657 RGEDNS--SDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPP 714
Query: 1013 SPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEIL 1067
+ R I+K+ + K+ A+DVDL+ IA TEG SGA++ AL +A L A+HE L
Sbjct: 715 NFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDL 769
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 131/227 (57%), Gaps = 1/227 (0%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ +GGL I++++ELP + P +F + VLLYGPPG GKT ++ A AA
Sbjct: 278 FSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEA 337
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ + ++ GP ++ KY+G +E +R IF A A P ++F DE D++APKR D +
Sbjct: 338 NAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAES 397
Query: 963 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 1022
R V LT LDG+ V V AAT+RP+ +D AL RPGRL++ + P RLDI+K
Sbjct: 398 RAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIK 457
Query: 1023 VISRKLP-LADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILN 1068
++ +P +D LE +A T + GADL A++ +A L A+ ++
Sbjct: 458 LLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTIS 504
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cdc48
PE=1 SV=2
Length = 823
Score = 273 bits (699), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 193/560 (34%), Positives = 284/560 (50%), Gaps = 50/560 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 251 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 308
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +DSI G V L + +MD G K
Sbjct: 309 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 358
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 359 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILS--IHTKNMKL 411
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+++ L+ +A++ GY DL L + + + + + + +L +
Sbjct: 412 GEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTME 471
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R++ R W+D+GGL +++ + E ++ P P F +
Sbjct: 472 NFRYALGVSNPSALREVAVVEVPNVR--WEDIGGLEEVKRELIESVQYPVDHPEKFQKFG 529
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
L VL YGPPG GKT + A A C+ FISVKGPELL+ + G SE +RDIF KA
Sbjct: 530 LSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKAR 589
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAAPC++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV AT+RP+
Sbjct: 590 AAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPE 649
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
LDAAL+RPGRLD L++ P R ILK RK P+A DVD+E IA T GFSGADL
Sbjct: 650 QLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADL 709
Query: 1052 QALLSDAQLSAVHEILN----------------NIDSNEPGKMPV--ITDALLKSIASKA 1093
+ A A+ E ++ ++ E G+ PV +T A + A
Sbjct: 710 GFVTQRAVKLAIKESISAEIERQKQREAAGEDVKMEDEEEGEDPVPELTRAHFEEAMKTA 769
Query: 1094 RPSVSEAEKLRLYSIYGQFL 1113
R SVS+ E +R Y + Q L
Sbjct: 770 RRSVSDVE-IRRYEAFAQSL 788
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 141/233 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 223 GYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 282
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 283 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 342
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P P RL+IL
Sbjct: 343 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 402
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNE 1074
+ ++ + L +DVDLE IA T G+ G+DL +L S+A + + E ++ ID +E
Sbjct: 403 SIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDE 455
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 273 bits (699), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 258/508 (50%), Gaps = 47/508 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD 337
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 388
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D + I +
Sbjct: 389 TKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNS 448
Query: 811 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ D F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVSNDHFQTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 565
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 985
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 1045
AT+RPD++D ALLRPGRLD+L++ P R I K RK P+A DVDL A+A T+G
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQG 685
Query: 1046 FSGADLQALLSDAQLSAVHEILNNIDSN 1073
FSGAD+ + Q S + I NI+ +
Sbjct: 686 FSGADITEI---CQRSCKYAIRENIEKD 710
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 139/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 385
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LA+DVDLE ++ T G+ GADL AL ++A L + E ++ ID
Sbjct: 386 RIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVID 435
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis
elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 273 bits (698), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 186/565 (32%), Positives = 283/565 (50%), Gaps = 51/565 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 235 FKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKMSGESESNLR 292
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A + E ++P+I+ D +D+I G V L + +MD G K
Sbjct: 293 KAFA----ECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQL----LTLMD--GLKT 342
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
++ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 343 RAH-----VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 395
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+++ L+ VA++C G+ DL L + + D + + + +L +
Sbjct: 396 GEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTME 455
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F AM + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 456 NFRFAMGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 512
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 513 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 572
Query: 935 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 991
AAAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 573 AAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPD 632
Query: 992 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 1051
++D A+LRPGRLD+L++ P RL I K RK PL+ D+DL +A T GFSGADL
Sbjct: 633 IIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADL 692
Query: 1052 QALLSDAQLSAVHEILNNIDSNEPGK------------------MPVITDALLKSIASKA 1093
+ A A+ E + E + +P IT A + A
Sbjct: 693 TEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFA 752
Query: 1094 RPSVSEAEKLRLYSIYGQFLDSKKS 1118
R SV++ + +R Y ++ Q L +
Sbjct: 753 RRSVTDND-IRKYEMFAQTLQQSRG 776
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 138/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 207 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE 266
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F++ +P +LF DE D+IAPKR + V
Sbjct: 267 TGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVE 326
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 327 KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 386
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + L +DVDLE +A+ GF GADL +L S+A + + E + ID
Sbjct: 387 RIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELID 436
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 273 bits (698), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 197/578 (34%), Positives = 286/578 (49%), Gaps = 69/578 (11%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFV-----CCSRLSLEK 636
F + P +L++GPPG+GKT +A+AVA F+ S+++ E
Sbjct: 240 FKAIGIKPPRGVLMYGPPGTGKTLMARAVANE-------TGAFFFLINGPEVMSKMAGES 292
Query: 637 GPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDE 696
+R+A EA +AP+I+ D +DSI + D + V++ L+ +MD
Sbjct: 293 ESNLRKAFE----EAEKNAPAIIFIDEIDSI-APKRDKTNGEVERRVVSQ---LLTLMD- 343
Query: 697 YGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQR 756
G K +S+ + +A+ I +L GRFD V + P A+ R +L I
Sbjct: 344 -GMKARSN-----VVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLR--IHT 395
Query: 757 RSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV--- 812
++++ +D++ L+ +A++ GY D+ L + + E I ++
Sbjct: 396 KNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSL 455
Query: 813 ---RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 869
D+F A+ P A+R+ T E WDDVGGL +I+ +KE +E P P+
Sbjct: 456 GVTMDNFRFALGNSNPSALRE---TVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQ 512
Query: 870 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 929
+ + L VL YGPPG GKT + A A S FISVKGPELL+ + G SE +RDI
Sbjct: 513 YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 572
Query: 930 FSKATAAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 986
F KA AAAP ++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV A
Sbjct: 573 FDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGA 632
Query: 987 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 1046
T+RPD +D A+LRPGRLD+L++ P RL IL RK PL ++L AIA T+GF
Sbjct: 633 TNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGF 692
Query: 1047 SGADLQALLSDAQLSAV---------HEILNNID--------SNEPGK---------MPV 1080
SGADL ++ A A+ HE + ++E K +P
Sbjct: 693 SGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPY 752
Query: 1081 ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKS 1118
IT A+ SVS+AE LR Y Y Q + + +
Sbjct: 753 ITKEHFAEAMKTAKRSVSDAE-LRRYEAYSQQMKASRG 789
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 143/233 (61%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+EM+ELP + P +F ++ VL+YGPPG GKT + A A
Sbjct: 212 GYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANE 271
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 272 TGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVE 331
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P RL++L
Sbjct: 332 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVL 391
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNE 1074
++ ++ + LADDVDLEA+A T G+ GAD+ +L S+A + + E ++ ID +E
Sbjct: 392 RIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDE 444
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 290/591 (49%), Gaps = 91/591 (15%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P IL+HGP G GKT LAKA+A L+ L A S +S E +R SN I+
Sbjct: 250 PRGILLHGPSGCGKTLLAKAIAGELKVP--LFAISATEITSGVSGESEARVRTLFSNAIA 307
Query: 650 EALDHAPSIVIFDNLDSII----SSSSDPE----------------------GSQPSTSV 683
+A P I+ D +D+I S+S D E ++P+
Sbjct: 308 QA----PCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQT 363
Query: 684 IALTKFLVDIMDEYGEKRKSSCGI-------------GPIAFVASAQSLEKIPQSLTSSG 730
+ DI++ + ++ G + + + E + +L G
Sbjct: 364 EQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGG 423
Query: 731 RFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVH 790
RFD + L P + R IL+ + LE + + ++A+ GY D+ +LV
Sbjct: 424 RFDKEICLGIPDQTARCKILKVITSKMRLENNFD-YEEIATLTPGYVGADINLLVKEAAT 482
Query: 791 AAVGRYLHSDSS---------------------------FEKHIKPTLVRD------DFS 817
+V R S+ + ++ ++P + DF
Sbjct: 483 NSVNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKLNSLYIEMIDFK 542
Query: 818 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 877
+A+ + +P A R+ T WDDVG L+ ++ + I P ++P + +
Sbjct: 543 KALKKVVPAAKREGFATIP---NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDS 599
Query: 878 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 937
+ VL+YGPPGCGKT + A A+ C FISVKGPELLNKY+G SE+AVR +F +A A++
Sbjct: 600 PAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASS 659
Query: 938 PCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
PC++FFDEFD++APKR T+RVVNQ LTE+DG+E + VF+ AAT+RPD++D
Sbjct: 660 PCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIID 719
Query: 995 AALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH--MTEGFSGADLQ 1052
AA+ RPGRLD++++ PSP ER +ILK ++ K+P+ DVDL + FSGADL
Sbjct: 720 AAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLS 779
Query: 1053 ALLSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKL 1103
L+ +A A H I D+N V + + ++ SK +PSVS ++L
Sbjct: 780 LLVKEA---ANHAISRGFDNNSTEPDTVTMEDFIFAL-SKIKPSVSRKDEL 826
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 151/331 (45%), Gaps = 54/331 (16%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ ++GG+ I+E IE P P I++ + +LL+GP GCGKT + A A
Sbjct: 215 FSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGEL 274
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ ++ E+ + G SE VR +FS A A APC++F DE D+IAPKR + +
Sbjct: 275 KVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDMER 334
Query: 963 RVVNQFLTELDGVEVLTG------------------------------------------ 980
R+V+Q LT +D + L+
Sbjct: 335 RIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTASNNNNKQQ 394
Query: 981 --------VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLAD 1032
V V AT+RP+ LD AL GR D+ + P R ILKVI+ K+ L +
Sbjct: 395 KNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLEN 454
Query: 1033 DVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEI----LNNIDSNEPGKMPVITDALLKS 1088
+ D E IA +T G+ GAD+ L+ +A ++V+ I LN S+ T+
Sbjct: 455 NFDYEEIATLTPGYVGADINLLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINNIG 514
Query: 1089 IASKARPSVSEAEKLRLYSIYGQFLDSKKSV 1119
++++ S E +L S+Y + +D KK++
Sbjct: 515 LSTELLISKEPLEPEKLNSLYIEMIDFKKAL 545
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 267 bits (682), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 285/574 (49%), Gaps = 60/574 (10%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 635
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 636 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 695
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQL----LTLMD 336
Query: 696 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 755
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 756 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 810
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 811 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 868
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVTNEHFHTALGNSNPSALRE---TVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPE 504
Query: 869 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 928
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 929 IFSKATAAAPCLLFFDEFDSIAPKR----GHDNTGVTDRVVNQFLTELDGVEVLTGVFVF 984
IF KA +APC+LFFDE DSIA +R G D G DRV+NQ LTE+DG+ VF+
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFII 624
Query: 985 AATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTE 1044
AT+RPD++D+ALLRPGRLD+L++ P RL+I K RK P+A DVD+ A+A T+
Sbjct: 625 GATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQ 684
Query: 1045 GFSGADLQALLSDAQLSAVHE-ILNNID-----SNEPGKM--------PVITDALLKSIA 1090
GFSGAD+ + A A+ E I +I+ S P M I A +
Sbjct: 685 GFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESM 744
Query: 1091 SKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSR 1124
AR SVS+A+ +R Y + Q L + ++ R
Sbjct: 745 KYARRSVSDAD-IRKYQAFAQTLQQSRGFGSEFR 777
Score = 189 bits (481), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 139/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LA+DVDLE I+ T G+ GADL AL ++A L + E ++ ID
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 266 bits (681), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 289/561 (51%), Gaps = 50/561 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 307
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +DSI G V L + +MD G K
Sbjct: 308 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 357
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 358 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILR--IHTKNMKL 410
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV------RD 814
+D++ L+ +A++ GY DL L + + E I ++ D
Sbjct: 411 ADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMD 470
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P A+R+ T E W+D+GGL +++ ++E +++P + F +
Sbjct: 471 NFRFALGSSNPSALRE---TVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFG 527
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL +GPPG GKT + A A CS FISVKGPELL+ + G SE VRDIF KA
Sbjct: 528 VTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKAR 587
Query: 935 AAAPCLLFFDEFDSIAPKR--GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDL 992
AAAPC++F DE DSIA R ++G DRVVNQ LTE+DGV VFV AT+RPD
Sbjct: 588 AAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQ 647
Query: 993 LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQ 1052
+D AL+RPGRLD+L++ P R IL+ R P+A+DVDL A+A T GFSGADL+
Sbjct: 648 IDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLE 707
Query: 1053 ALLSDA-QLSAVHEILNNID-SNEPGKMPVITDALLKSIAS--------------KARPS 1096
++ A +L+ I +I NE G+ P D ++ AS AR S
Sbjct: 708 FVVQRAVKLAIKDSIEEDIKRENETGEAPA-DDVVMDEDASVSQVQRHHVEEAMKMARRS 766
Query: 1097 VSEAEKLRLYSIYG-QFLDSK 1116
VS+AE +R Y Y Q L S+
Sbjct: 767 VSDAE-VRRYEAYAHQLLTSR 786
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 222 GYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 281
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 282 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 341
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P P RL+IL
Sbjct: 342 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEIL 401
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNE 1074
++ ++ + LADDVDLE IA T G+ G+DL +L S+A + + E ++ ID +E
Sbjct: 402 RIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDE 454
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 264 bits (674), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 285/541 (52%), Gaps = 46/541 (8%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
+S + P IL++GPPG+GKT +A+A+A L+ + S+++ E +R
Sbjct: 234 YSKIGVKPPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIM--SKMAGESESNLR 291
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A EA ++P+I+ D +D++ +G V L + +MD G K
Sbjct: 292 KAFE----EAEKNSPAIIFIDEIDALAPKREKSQGEVERRIVSQL----LTLMD--GMKA 341
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + + + I +L GRFD +++ P + R IL I ++++
Sbjct: 342 RSN-----VIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEILR--IHTKNMKM 394
Query: 762 SDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYL-HSDSSFEKHIKPTLVR-----D 814
S+++ L+ + + G+ DL L + L D EK L +
Sbjct: 395 SEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQIDLDSEKIDAKVLASLKVNSE 454
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A+ P ++R+ T + W D+GGL ++ ++E ++ P ++P F +
Sbjct: 455 NFRYAIEHTDPSSLRE---TVIQSPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFG 511
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
+ VL YGPPGCGKT + A A C FIS+KGPELL+ ++G SE +RD+F++A
Sbjct: 512 MTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARAR 571
Query: 935 AAAPCLLFFDEFDSIAPKR-GHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDL 992
AAPC+LFFDE DSIA R G+D ++G TDR++NQ L+E+DG+ VFV AT+RPD
Sbjct: 572 GAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQ 631
Query: 993 LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQ 1052
LD+AL+RPGRLD+L++ P R+ IL+ +K PL+ ++DL +A T+ FSGADL
Sbjct: 632 LDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPLSPEIDLRQLAEATDKFSGADLS 691
Query: 1053 ALLSDAQLSAVHEILNN-----------IDSNEPGKMPVIT-DALLKSIASKARPSVSEA 1100
+ A A+ E + +D +P +P + D L++S+ + AR SVSE
Sbjct: 692 EICQRACKLAIRETIEYELEQKKKGSEMMDLEDP--VPYLRPDHLVQSLKT-ARRSVSEK 748
Query: 1101 E 1101
E
Sbjct: 749 E 749
Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DDVGG I+E++ELP + ++++ ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIANE 265
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
+ GPE+++K G SE +R F +A +P ++F DE D++APKR V
Sbjct: 266 TGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREKSQGEVE 325
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DG++ + V V AT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 326 RRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEIL 385
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + +++DVDL AI GF+G+DL +L S+A L + E L ID
Sbjct: 386 RIHTKNMKMSEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQID 435
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 261/528 (49%), Gaps = 36/528 (6%)
Query: 567 INRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVF 626
+N + +L+P+ F + P IL HGPPG GKT LA A+A A + F
Sbjct: 247 MNVLFPILNPEP---FKKIGVKPPSGILFHGPPGCGKTKLANAIANE--------AGVPF 295
Query: 627 VCCSRLSLEKG--PIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVI 684
S + G + + S+A APSIV D +D+I S E Q
Sbjct: 296 YKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI---GSKRENQQREMEKR 352
Query: 685 ALTKFL--VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPA 742
+T+ L +D G+K G + + + + + +L SGRF+ + L AP
Sbjct: 353 IVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPD 412
Query: 743 ASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL---HS 799
R IL Q+ LE + +A G+ DLE + A+ R L S
Sbjct: 413 EDARAEILSVVAQKLRLEGPFDKKR-IARLTPGFVGADLESVAYLAGRKAIKRILDSRKS 471
Query: 800 DSSFEKHIKPTLVRDDFSQAMHEFLPVAMRD----ITKTSAEGGRSG--------WDDVG 847
+ S + + +R + + E L V M D + A R G WDDVG
Sbjct: 472 EQSGDGEDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVG 531
Query: 848 GLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFI 907
GL ++ I P K P+I+ + L + LLYGPPGCGKT I AAA F+
Sbjct: 532 GLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFM 591
Query: 908 SVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQ 967
+KG ELLNKY+G SE A+R +F +A APC++FFDE D++ RG + V +R++NQ
Sbjct: 592 HIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQ 651
Query: 968 FLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 1027
FL ELDG E V+V AT+RPD++D A LRPGR LL+ P+ ER ILK I+RK
Sbjct: 652 FLVELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARK 710
Query: 1028 LPLADDVDLEAIA-HMTEGFSGADLQALLSDAQLSAVHEILNNIDSNE 1074
P+ VDL+ IA + EGFSGADL L+ A AV E++ + +S+E
Sbjct: 711 KPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSE 758
Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 130/244 (53%), Gaps = 10/244 (4%)
Query: 843 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
+ D GG+ I + ++ + P P F + ++ S +L +GPPGCGKT + A A
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 903 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 962
+ F + E+++ GASE+ +R++FSKA AP ++F DE D+I KR + +
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK 351
Query: 963 RVVNQFLTELDG---------VEVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFP 1012
R+V Q LT +DG + G V V AT+RPD LD AL R GR + + P
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 1013 SPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDS 1072
R +IL V+++KL L D + IA +T GF GADL+++ A A+ IL++ S
Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKS 471
Query: 1073 NEPG 1076
+ G
Sbjct: 472 EQSG 475
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 259 bits (662), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 278/571 (48%), Gaps = 68/571 (11%)
Query: 585 YHLPL--PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQ 642
+HL + P +L+HGPPG GKT LA A+A L+ VA V S +S E Q
Sbjct: 291 HHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQ 344
Query: 643 ALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRK 702
L +A+ +AP I+ D +D+I V L + D+ + R
Sbjct: 345 KLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR- 403
Query: 703 SSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECS 762
+ + + + + +L +GRFD + L P + R+ IL+ ++ L +
Sbjct: 404 -------VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQA 456
Query: 763 DEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH---------------- 806
+ +A G+ DL L AV R L +K
Sbjct: 457 FD-FCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEER 515
Query: 807 --IKPT------------LVRDD--FSQAMHEFLPVAMRD----ITKTSAEGGRSG---- 842
+PT L+RD S+ + L + + D ++ R G
Sbjct: 516 LGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTV 575
Query: 843 ----WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAA 898
W D+G L DI+ + I P + P+ F L + VLL GPPGCGKT + A
Sbjct: 576 PNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV 635
Query: 899 AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNT 958
A L FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R T
Sbjct: 636 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 695
Query: 959 GVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
G + RVVNQ LTE+DG+E VF+ AAT+RPD++D A+LRPGRLD+ LF P P +RL
Sbjct: 696 GASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRL 755
Query: 1019 DILKVISR---KLPLADDVDLEAIAH--MTEGFSGADLQALLSDAQLSAV-HEILNNIDS 1072
ILK I++ K PL DV+LEAIA + ++GADL AL+ +A + A+ E+
Sbjct: 756 AILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSG 815
Query: 1073 NEPGKMPVITDALLKSIASKARPSVSEAEKL 1103
NE G++ V + + K R S+S+ +++
Sbjct: 816 NEKGELKV-SHKHFEEAFKKVRSSISKKDQI 845
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 136/246 (55%), Gaps = 9/246 (3%)
Query: 843 WDDVGG--LTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
++DVGG +T ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 264 FEDVGGNDMT-LKEVCKMLIHM--RHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAG 320
Query: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGV 960
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 ELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDM 380
Query: 961 TDRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRER 1017
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 381 ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASR 440
Query: 1018 LDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNEPGK 1077
IL+ + RKL L D +AH+T GF GADL AL +A + AV+ +L + + K
Sbjct: 441 ERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ-KK 499
Query: 1078 MPVITD 1083
P + D
Sbjct: 500 NPEMED 505
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 45/268 (16%)
Query: 535 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINR---IKVLLSPDSGLWFSTYHLPLPG 591
V+ +V+ +GF V +++W A + I + +L + F L P
Sbjct: 558 VALSSVQPSAKREGF-VTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPA 616
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQA 643
+L+ GPPG GKT LAKAVA + + F+ KGP + +A
Sbjct: 617 GVLLAGPPGCGKTLLAKAVANE--------SGLNFISV------KGPELLNMYVGESERA 662
Query: 644 LSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKS 703
+ A + AP ++ FD +D++ SD E SV + + L + MD +++
Sbjct: 663 VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET---GASVRVVNQLLTE-MDGLEARQQ- 717
Query: 704 SCGIGPIAFVASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLEC 761
+ +A+ + I ++ GR D V LP PA +R AIL+ + +
Sbjct: 718 ------VFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRLAILKTITKNGTKPP 769
Query: 762 SD-EILLDVAS---KCDGYDAYDLEILV 785
D ++ L+ + +CD Y DL LV
Sbjct: 770 LDADVNLEAIAGDLRCDCYTGADLSALV 797
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis
elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 183/565 (32%), Positives = 281/565 (49%), Gaps = 52/565 (9%)
Query: 582 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 641
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 236 FKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVM--SKMSGESESNLR 293
Query: 642 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
+A E + P+I+ D +D+I G V L + +MD G K
Sbjct: 294 KAFE----ECEKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQL----LTLMD--GVKG 343
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
+S+ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 344 RSN-----LVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 396
Query: 762 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 814
+D++ L+ +A++C G+ DL L + + D + + +L +
Sbjct: 397 ADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTME 456
Query: 815 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 874
+F A + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 457 NFRFAQGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 934
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 573
Query: 935 AAAPCLLFFDEFDSI----APKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRP 990
AAAPC+LFFDE DSI G D G +DRV+NQ LTE+DG+ VF+ AT+RP
Sbjct: 574 AAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRP 633
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGAD 1050
D++D A+LRPGRLD+L++ P R ILK RK PL+ D+DL +A T GFSGAD
Sbjct: 634 DIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGAD 693
Query: 1051 LQALLSDAQLSAVHEILNN------------------IDSNEPGKMPVITDALLKSIASK 1092
L + A A+ E + ++ + +P IT A +
Sbjct: 694 LTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKF 753
Query: 1093 ARPSVSEAEKLRLYSIYGQFLDSKK 1117
AR SV++ + +R Y ++ Q L +
Sbjct: 754 ARRSVTDND-IRKYEMFAQTLQQSR 777
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 138/230 (60%)
Query: 842 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 208 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANE 267
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
F + GPE+++K G SE +R F + P +LF DE D+IAPKR N V
Sbjct: 268 TGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVE 327
Query: 962 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 1021
R+V+Q LT +DGV+ + + V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 328 RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 387
Query: 1022 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 1071
++ ++ + LADDVDLE IA+ GF GADL +L S+A L + E + ID
Sbjct: 388 RIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELID 437
>sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing protein C16E9.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16E9.10c PE=1 SV=1
Length = 779
Score = 256 bits (653), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 178/583 (30%), Positives = 290/583 (49%), Gaps = 80/583 (13%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPI--IRQALSNF 647
P +L+HGPPG GKT LA A+A L + F+ S S+ G + +
Sbjct: 208 PRGVLLHGPPGCGKTMLANALANEL--------GVPFISISAPSIVSGMSGESEKKVREV 259
Query: 648 ISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGI 707
EA AP ++ D +D++ E +Q + +FL MDE ++
Sbjct: 260 FEEAKSLAPCLMFIDEIDAVTPKR---ESAQREMERRIVAQFLT-CMDELSFEKTDG--- 312
Query: 708 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 766
P+ + + + + +L +GRFD + L P+ R+ IL + L+ S +
Sbjct: 313 KPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILR--TMAKGLKLSGDFDF 370
Query: 767 LDVASKCDGYDAYDLE--------ILVDRTVH---------------------------- 790
+A + GY DL+ I + R +
Sbjct: 371 RQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNKLDLNSDPRFNELDSDMALDSN 430
Query: 791 --------AAVGRYL--HSDSSFEKHIKP-TLVRDDFSQAMHEFLPVAMRDITKTSAEGG 839
+ + RYL H D + ++P + DF +A+ + P + R+ T G
Sbjct: 431 DSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKREGFATVP--G 488
Query: 840 RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 899
S W+++G L I+ ++ I P K P ++ + + VLL+GPPGCGKT + A A
Sbjct: 489 VS-WNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVA 547
Query: 900 AACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 959
FIS++GPELLNKY+G SE+AVR +F +A A++PC++FFDE D++ P+R +
Sbjct: 548 NESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSE 607
Query: 960 VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 1019
+ RVVN LTELDG+ +GV+V AAT+RPD++D A+LRPGRLD+ L D P ER++
Sbjct: 608 ASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVE 667
Query: 1020 ILKVISRKLPLADDVDLEAIAH--MTEGFSGADLQALLSDAQLSAVHE-ILNNIDSNEP- 1075
ILK ++++ PL ++V+L+ + FSGADL AL+ +A ++A+ + +I SNEP
Sbjct: 668 ILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPE 727
Query: 1076 -----GKMPV-ITDALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
P+ +T+A + +PSVS+ ++ + + ++
Sbjct: 728 ITQHSALEPIRVTNADFELAFKNIKPSVSDRDRQKYQRLAKRW 770
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 133/230 (57%), Gaps = 4/230 (1%)
Query: 845 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 904
D+GGL D N + E++ +P K P ++ + VLL+GPPGCGKT + A A +
Sbjct: 175 DIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGV 234
Query: 905 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV 964
FIS+ P +++ G SE+ VR++F +A + APCL+F DE D++ PKR + R+
Sbjct: 235 PFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRI 294
Query: 965 VNQFLTELD--GVEVLTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI 1020
V QFLT +D E G V V AT+RPD LD+AL R GR DR + PS R I
Sbjct: 295 VAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKI 354
Query: 1021 LKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNI 1070
L+ +++ L L+ D D +A T G+ GADL+AL + A + A+ I N I
Sbjct: 355 LRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEI 404
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 128/313 (40%), Gaps = 35/313 (11%)
Query: 536 SFYTVKERGSTQGFDSNVSSLSW--MGTTASDVINRIKVLLSP-DSGLWFSTYHLPLPGH 592
+ V+ +GF + V +SW +G S + ++ P + + + P
Sbjct: 470 ALAKVQPSSKREGF-ATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTG 528
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPG GKT LAKAVA E + ++ ++ E +RQ F+ A
Sbjct: 529 VLLWGPPGCGKTLLAKAVAN--ESKANFISIRGPELLNKYVGESERAVRQV---FL-RAR 582
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
+P ++ FD LD+++ D S V L L + D G +
Sbjct: 583 ASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSDRSG-----------VYV 631
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVAS- 771
+A+ + I ++ GR D + + P A ER IL+ ++ L +E+ LDV
Sbjct: 632 IAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLH--EEVNLDVLGR 689
Query: 772 --KCDGYDAYDLEILVDRTVHAAVGRYLHSD-SSFEKHI------KPTLVRD-DFSQAMH 821
+C + DL LV A+ + +D +S E I +P V + DF A
Sbjct: 690 DERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTNADFELAFK 749
Query: 822 EFLP-VAMRDITK 833
P V+ RD K
Sbjct: 750 NIKPSVSDRDRQK 762
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 259/525 (49%), Gaps = 64/525 (12%)
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
P +L+HGPPG GKT LA A+A L+ VA V S +S E Q L
Sbjct: 297 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQKLRELFD 350
Query: 650 EALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP 709
+A+ +AP IV D +D+I V L + D+ + R
Sbjct: 351 QAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR-------- 402
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
+ + + + + +L +GRFD V L P + R+ IL+ ++ L + +
Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFN-FCHL 461
Query: 770 ASKCDGYDAYDLEILVDRTVHAAVGRYLH----------------SDSSFEKHI--KPT- 810
A G+ DL L AV R L S+ E+ + +PT
Sbjct: 462 AHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPTS 521
Query: 811 -----------LVRDD--FSQAMHEFLPVAMRDITKTSAE----GGRSG--------WDD 845
L+RD S+ + L + + D AE R G W D
Sbjct: 522 ETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWAD 581
Query: 846 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
+G L DI++ + I P + P+ F L + +LL GPPGCGKT + A A L
Sbjct: 582 IGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLN 641
Query: 906 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 965
FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVV
Sbjct: 642 FISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVV 701
Query: 966 NQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVIS 1025
NQ LTE+DG+E VF+ AAT+RPD++D A+LRPGRLD+ LF P P +R+ ILK I+
Sbjct: 702 NQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTIT 761
Query: 1026 R---KLPLADDVDLEAIAH--MTEGFSGADLQALLSDAQLSAVHE 1065
+ K PL +DV+LE IA+ ++GADL AL+ +A L A+ +
Sbjct: 762 KNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQ 806
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 129/229 (56%), Gaps = 6/229 (2%)
Query: 843 WDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
++DVGG ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 263 FEDVGGNDATLKEVCKMLIHM--RHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 902 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 961
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 LDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDME 380
Query: 962 DRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 1018
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARE 440
Query: 1019 DILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEIL 1067
IL+ + RKL L + + +AH+T GF GADL AL +A + AV+ +L
Sbjct: 441 RILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVL 489
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 137/324 (42%), Gaps = 65/324 (20%)
Query: 535 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINR--IKVLLSP-DSGLWFSTYHLPLPG 591
V+ V+ +GF V +++W A + I I +L+P + F T L P
Sbjct: 557 VALAEVQPSAKREGF-VTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPA 615
Query: 592 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQA 643
IL+ GPPG GKT LAKAVA + + F+ KGP + +A
Sbjct: 616 GILLAGPPGCGKTLLAKAVANE--------SGLNFISV------KGPELLNMYVGESERA 661
Query: 644 LSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKS 703
+ A + AP ++ FD +D++ SD E SV + + L + MD +++
Sbjct: 662 VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET---GASVRVVNQLLTE-MDGLETRQQ- 716
Query: 704 SCGIGPIAFVASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLEC 761
+ +A+ + I ++ GR D V LP PA +R AIL+ + +
Sbjct: 717 ------VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRVAILKTITKNGTKPP 768
Query: 762 SDE-ILLDVAS---KCDGYDAYDLEILVDRTVHAAVGRYL-----------------HSD 800
DE + L+ + +C+ Y DL LV A+ + + H +
Sbjct: 769 LDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFE 828
Query: 801 SSFEKHIKPTLVRDDFSQAMHEFL 824
+F+K +KP++ D Q M+E L
Sbjct: 829 DAFKK-VKPSISIKD--QVMYEAL 849
>sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2
Length = 980
Score = 253 bits (646), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 202/582 (34%), Positives = 299/582 (51%), Gaps = 58/582 (9%)
Query: 554 SSLSWMGTTA--SDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVA 611
SSLS G A S++ +K L P L T +L+ GPPG GKT++ VA
Sbjct: 431 SSLSPPGLEALVSELCAVLKPRLQPGGALLTGTSS------VLLRGPPGCGKTTV---VA 481
Query: 612 KSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSS 671
+ H L H++ V CS L E + L S A P++++ +D +
Sbjct: 482 AACSH---LGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLL---G 535
Query: 672 SDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGR 731
D +G V+A+ + L+ E +SC P+ VA+ + +P + ++
Sbjct: 536 RDRDGLGEDARVMAVLRHLL-----LNEDPLNSCP--PLMVVATTSRAQDLPADVQTA-- 586
Query: 732 FDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVH 790
F +++PA + +R +IL L E+ L +A +C G+ DL L+ +
Sbjct: 587 FPHELEVPALSEGQRLSILRALTAH--LPLGQEVNLAQLARRCAGFVVGDLYALLTHSSR 644
Query: 791 AAVGRYLHS---------DSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRS 841
AA R +S D L+ +DF QA+ + + A G
Sbjct: 645 AACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQL------QTAHSQAVGAPK 698
Query: 842 ----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 897
W DVGGL +++ I E I+LP + P + + RS +LL+GPPG GKT + A
Sbjct: 699 IPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLG--LRRSGLLLHGPPGTGKTLLAKA 756
Query: 898 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH-- 955
A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++FFDE DS+AP RG
Sbjct: 757 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 816
Query: 956 DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 1015
D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALLRPGR D+L+F R
Sbjct: 817 DSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDR 876
Query: 1016 -ERLDILKVISRKLPLADDVDL-EAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSN 1073
+L +L I+RK L V L + +GADL +L SDA +A+ +++++
Sbjct: 877 ASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEG 936
Query: 1074 -EPGK--MPVITDALLKSIASKARPSVSEAEKLRLYSIYGQF 1112
EPG + + + LL++ A++ +PSVSE E LR I +F
Sbjct: 937 LEPGSSALMLTMEDLLQA-AARLQPSVSEQELLRYKRIQRKF 977
>sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1
Length = 981
Score = 249 bits (636), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 187/544 (34%), Positives = 280/544 (51%), Gaps = 56/544 (10%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 652
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRAVETKLQATFSRAR 520
Query: 653 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 712
P++++ +D + D +G V A + L ++DE R P+
Sbjct: 521 RCRPAVLLLTAVDLL---GRDRDGLGEDARVAATLRHL--LLDEDALSR-----CPPLMV 570
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
VA+ ++ +P + ++ F +++P + ++R +IL+ L E+ L +A
Sbjct: 571 VATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAH--LPLGQEVNLPQLAR 626
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP---------TLVRDDFSQAMHE 822
+C G+ DL L+ T AA R S S+ + L+ +DF QA+ +
Sbjct: 627 RCAGFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQ 686
Query: 823 FLPVAMRDITKTSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 878
+ A G W DVGGL D++ I E I+LP + P + + R
Sbjct: 687 L------QTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLG--LRR 738
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAP
Sbjct: 739 SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 798
Query: 939 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 996
C++FFDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD A
Sbjct: 799 CIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPA 858
Query: 997 LLRPGRLDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDLEAIAHMTEG-FSGADLQAL 1054
LLRPGR D+L+F R +L +L I+RK L V L + +GADL +L
Sbjct: 859 LLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSL 918
Query: 1055 LSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSI------ASKARPSVSEAEKLRLYSI 1108
SDA ++A+ + +++ + + + ALL ++ A++ +PSVSE E LR I
Sbjct: 919 CSDAMMTALKRRVRDLEEG----LELRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRI 974
Query: 1109 YGQF 1112
+F
Sbjct: 975 QRKF 978
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 83/193 (43%), Gaps = 11/193 (5%)
Query: 879 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 938
S VLL GPPG GKT V AA + L + V L A E ++ FS+A P
Sbjct: 465 SCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRP 524
Query: 939 CLLFFDEFDSIAPKRGHDNTGVTDRV---VNQFLTELDGVEVLTGVFVFAATSRPDLL-- 993
+L D + R D G RV + L + D + + V A TSR L
Sbjct: 525 AVLLLTAVDLLG--RDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPT 582
Query: 994 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQA 1053
D P L+ + S +RL IL+ ++ LPL +V+L +A GF DL A
Sbjct: 583 DVQTAFPHELEVPVL----SEAQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLYA 638
Query: 1054 LLSDAQLSAVHEI 1066
LL+ +A I
Sbjct: 639 LLTHTCRAACTRI 651
>sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6 PE=1
SV=1
Length = 941
Score = 249 bits (636), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 288/564 (51%), Gaps = 64/564 (11%)
Query: 565 DVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHI 624
+ +N + +LSP L S L +L+HG PG GK ++ K VA+ L H+
Sbjct: 354 ETVNILASVLSPP--LCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLG------LHV 405
Query: 625 VFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIV------IFDNLDSIISSSSDPEG-S 677
V C L AL+ + A ++P+I+ +F NL S S D G S
Sbjct: 406 VEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVS 465
Query: 678 QPSTSVI-ALTKFLVD---IMDEYGEKRKSSCGIGP-----IAFVASAQSLEKIPQSLTS 728
SVI LT+ + + M+E S +G + +ASA+S E I ++
Sbjct: 466 FEIASVIRELTEPVSNGDSSMEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRR 525
Query: 729 SGRFDFHVQLPAPAASERKAILEHEIQRRSLE---CSDEILLDVASKCDGYDAYDLEILV 785
F +++ + +R +L +Q S SDE + + + G+ DL+ LV
Sbjct: 526 C--FSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALV 583
Query: 786 -DRTVHAAV-----------------GRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVA 827
D + + G +H S + + ++DF++A+
Sbjct: 584 ADAGANLYISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDR---SK 640
Query: 828 MRDITKTSA-EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGP 886
R+ + A + WDDVGGL D++ +I + ++LP ++F+ LR RS VLLYGP
Sbjct: 641 KRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSG-LRKRSGVLLYGP 699
Query: 887 PGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEF 946
PG GKT + A A CSL F+SVKGPEL+N YIG SE+ VRDIF KA +A PC++FFDE
Sbjct: 700 PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDEL 759
Query: 947 DSIAPKRG--HDNTGVTDRVVNQFLTELDGV-EVLTGVFVFAATSRPDLLDAALLRPGRL 1003
DS+AP RG D+ GV DRVV+Q L E+DG+ + +F+ A++RPDL+D ALLRPGR
Sbjct: 760 DSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRF 819
Query: 1004 DRLLFCDF---PSPRERLDILKVISRKLPLADDVDLEAIAHMTEG-FSGADLQALLSDAQ 1059
D+LL+ S RER +LK ++RK L++DV L ++A F+GAD+ AL +DA
Sbjct: 820 DKLLYVGVNADASYRER--VLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAW 877
Query: 1060 LSAVHEILNNIDSNEPGKMPVITD 1083
A ++ DS G MP D
Sbjct: 878 FQAAKRKVSKSDS---GDMPTEED 898
>sp|Q6FW67|PEX6_CANGA Peroxisomal biogenesis factor 6 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PEX6
PE=3 SV=1
Length = 1017
Score = 246 bits (629), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 264/503 (52%), Gaps = 56/503 (11%)
Query: 599 PGSGKTSLAKAVAKSLEHH---KDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHA 655
P GK S+ +++A L + D ++ + S ++ ++ L N +
Sbjct: 473 PKVGKASILRSIAIDLSYQFVDIDTLSVVFSSGSSDIATTFLGYLKGKLENLLPFT---G 529
Query: 656 PSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP-IAFVA 714
+I++ ++D I+ + Q S V AL L+ + Y I P + F
Sbjct: 530 NTIILIKHIDHILKKVDQNQDIQQSRQVKALEGDLISFIKSYSR-------IYPGVVFAF 582
Query: 715 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI-----------QRRSLECSD 763
++ S++ +P+ S +FD+ V P +R++I++ + ++ ++CS+
Sbjct: 583 TSASIDNLPEGFRSEIKFDYVVH--PPNEKQRRSIIDELLSTSDLFQKYGNRKLRIQCSN 640
Query: 764 EILLDVAS-KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL---------VR 813
EI + S G YD++ ++ V ++ + + + IK + VR
Sbjct: 641 EIEISTLSLHSAGLSPYDIQYIISLAVADSLRKCNNYLLWRQNKIKVDMISIQNALEKVR 700
Query: 814 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 873
D+S ++ ++ ++T WDDVGGL+ +++AI E I+LP K P +F
Sbjct: 701 SDYSASIGA---PSIPNVT----------WDDVGGLSSVKDAIMETIDLPLKHPELFGSG 747
Query: 874 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 933
L+ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F KA
Sbjct: 748 -LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKA 806
Query: 934 TAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVL-TGVFVFAATSRP 990
A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ GVF+ AT+RP
Sbjct: 807 RDAKPCVIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRP 866
Query: 991 DLLDAALLRPGRLDRLLFCDFPSPRER-LDILKVISRKLPLADDVDL-EAIAHMTEGFSG 1048
DLLD ALLRPGR D+L++ RE+ +I++ ++RK ++ D++ E ++ ++G
Sbjct: 867 DLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDELVSDFPFSYTG 926
Query: 1049 ADLQALLSDAQLSAVHEILNNID 1071
AD AL SDA L A+ I ID
Sbjct: 927 ADFYALCSDAMLKAMTRISKEID 949
>sp|O13764|PEX6_SCHPO Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex6 PE=3 SV=1
Length = 948
Score = 246 bits (627), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 277/557 (49%), Gaps = 60/557 (10%)
Query: 589 LPGH---ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCS-RLSLEKGPIIRQAL 644
+PG L+HG P +GKT K++E L + VF S + + L
Sbjct: 418 VPGFNPFFLLHGNPFTGKT-------KAVEEVASLFSAPVFTISSYEFADATADHLEAKL 470
Query: 645 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 704
F+ + +I+ +LD ++S SSD P + I + +D++
Sbjct: 471 DMFVQNVVKSPCAIIFVKDLD-VLSISSDEGNIVPGSKSIQILLSKIDLV---------K 520
Query: 705 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 764
G + + S+EKIP + S F+ ++ ER +L+ I ++
Sbjct: 521 SPQGRYIVIGTCHSIEKIPYEILSESFFE--LKFSELEMDERLELLK--IYANNVIIDKR 576
Query: 765 I-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI--KPTLVRDDFSQAMH 821
I L DVA K + +LE L D AAV R + + I P + D +++
Sbjct: 577 ISLKDVALKTNSMSFGELECLPDHMTKAAVDRIKRTGYDNDSIILSGPIITEQDVDVSIN 636
Query: 822 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 881
++ + T + WDD+GGL + + +++ ++LP +FP +F+Q L+ RS V
Sbjct: 637 RI----RKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQG-LKPRSGV 691
Query: 882 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 941
LLYGPPG GKT + A A SL F+S+KGPELLN Y+G SE VR++F KA ++PC++
Sbjct: 692 LLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVI 751
Query: 942 FFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTG--VFVFAATSRPDLLDAAL 997
FFDE DSIAP RG+ D+ V DRVV+Q L ELD + VFV AT+RPDLLD +L
Sbjct: 752 FFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSL 811
Query: 998 LRPGRLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDLEAIA-HMTEGFSGADLQALL 1055
LRPGR D+L++ E + +L+ +++ L + +DL IA + F+GAD+ AL
Sbjct: 812 LRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALC 871
Query: 1056 SDAQLSAVHEILNNID--------------------SNEPGKMPVITDALLKSIASKARP 1095
SDA LSA+ N ID + + ++ + + L S+ K RP
Sbjct: 872 SDAVLSAIKRKTNEIDLLIQASGTDLSTEEFFKRNENQDSLELRITKEDFLTSL-KKLRP 930
Query: 1096 SVSEAEKLRLYSIYGQF 1112
S+SE E R + QF
Sbjct: 931 SISEQELHRYEMVRHQF 947
>sp|Q9HG03|PEX6_PENCH Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6
PE=3 SV=1
Length = 1459
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 227/411 (55%), Gaps = 40/411 (9%)
Query: 713 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 771
+A+ +E IP+ + S +F ++ AP ER+ IL++ + R + S ++ L +A
Sbjct: 886 IATTTDVETIPEGIRSLITHEF--EMGAPEEKEREGILQNAVTERGIRLSADVDLGSIAL 943
Query: 772 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--LVRDDFSQAMHEFLPVAMR 829
K A DL +V+R A R L S + K I + VRD R
Sbjct: 944 KTAALVAGDLVDVVERAAGARTAR-LESLAEASKKISGSEVFVRDVLLAGGD-----GAR 997
Query: 830 DITKT----SAEGGRS--------------GWDDVGGLTDIQNAIKEMIELPSKFPNIFA 871
+TK + E R GWDDVGGLT++++A+ E I+LP + P +FA
Sbjct: 998 GVTKADFDAAVEAARKNFADSIGAPKIPNVGWDDVGGLTNVKDALVETIQLPLERPELFA 1057
Query: 872 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
+ ++ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F
Sbjct: 1058 KG-MKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQ 1116
Query: 932 KATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV----EVLTGVFVFA 985
+A A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ E GVFV
Sbjct: 1117 RARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIG 1176
Query: 986 ATSRPDLLDAALLRPGRLDRLLFCDFP-SPRERLDILKVISRKLPLADDVDLEAIA-HMT 1043
AT+RPDLLD ALLRPGR D++L+ + R++ IL+ ++RK L DV L+ +A +
Sbjct: 1177 ATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLP 1236
Query: 1044 EGFSGADLQALLSDAQLSAVHEILNNIDS--NEPGKMPVITDALLKSIASK 1092
++GADL AL SDA L A+ +D N PV T +A+K
Sbjct: 1237 LTYTGADLYALCSDAMLKAITRKATAVDEKINALPNGPVSTAWFFDHLATK 1287
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 593 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 650
IL +GPPG+GKT LAKA+A + F KGP + L+ +I E
Sbjct: 1066 ILFYGPPGTGKTLLAKAIATEFS--------LNFFSV------KGP---ELLNMYIGESE 1108
Query: 651 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 701
A D P +V FD LDS+ + +G +++ L ++ G +
Sbjct: 1109 ANVRRVFQRARDARPCVVFFDELDSVAPKRGN-QGDSGGVMDRIVSQLLAELDGMNGGEE 1167
Query: 702 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 761
S G + + + + + +L GRFD + L ++A + + R+
Sbjct: 1168 NS----GGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALH 1223
Query: 762 SDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGR 795
D L VA + Y DL L + A+ R
Sbjct: 1224 PDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR 1258
>sp|Q07844|RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RIX7 PE=1 SV=1
Length = 837
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 196/663 (29%), Positives = 316/663 (47%), Gaps = 115/663 (17%)
Query: 550 DSNVSSLSWMGTTASDVINRIKV-LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAK 608
+S++ SL M + ++ I + +L P+ ++ ST P P +L+HGPPG GKTS+A
Sbjct: 201 NSSLKSLGGMDDVVAQLMELIGLPILHPE--IFLSTGVEP-PRGVLLHGPPGCGKTSIAN 257
Query: 609 AVAKSLEHHKDLVAHIVFVCCSRLSLEKGPI--IRQALSNFISEALDHAPSIVIFDNLDS 666
A+A L+ + F+ S S+ G + + + EA AP +V FD +D+
Sbjct: 258 ALAGELQ--------VPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDA 309
Query: 667 IISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSL 726
I + ++A L+ MDE ++ + P+ + + + + +L
Sbjct: 310 ITPKRDGGAQREMERRIVAQ---LLTSMDELTMEKTNG---KPVIIIGATNRPDSLDAAL 363
Query: 727 TSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-------VASKCDGYDAY 779
+GRFD + L P R IL+ + SD + +D +A G+
Sbjct: 364 RRAGRFDREICLNVPNEVSRLHILK--------KMSDNLKIDGAIDFAKLAKLTPGFVGA 415
Query: 780 DLEILVDRTVHAAVGRYLH------------SDSSFEK-HIKPTLVRDDFS----QAMHE 822
DL+ LV A+ R +DSS + I T D+ S M +
Sbjct: 416 DLKALVTAAGTCAIKRIFQTYANIKSTPTTATDSSEDNMEIDETANGDESSLKNTANMID 475
Query: 823 FLPV-------------------------------AMRDITKTSAEGGRSGWDDV----- 846
LP+ A+ I T+ G + DV
Sbjct: 476 PLPLSVVQQFIRNYPEPLSGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANV 535
Query: 847 GGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRF 906
G L ++ + I P K P ++ + + VLL+GPPGCGKT + A A F
Sbjct: 536 GALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANF 595
Query: 907 ISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVN 966
IS+KGPELLNKY+G SE+++R +F++A A+ PC++FFDE D++ P+R + + RVVN
Sbjct: 596 ISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRVVN 655
Query: 967 QFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR 1026
LTELDG+ G+FV AT+RPD++D A+LRPGRLD+ LF + P+ E+LDI+K +++
Sbjct: 656 TLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTK 715
Query: 1027 K--LPLADDVDLEAIAHMTE--GFSGADLQALLSDAQLSA----------VHEILNNIDS 1072
PL+ DVD E I + FSGADL AL+ ++ + A + +L+N
Sbjct: 716 SHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLD 775
Query: 1073 NE--------PGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSR 1124
E G+ ++T + +S K +PSVS+ ++L+ Y + L+ K + + +
Sbjct: 776 KEFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVSDKDRLK----YDR-LNKKMGLTEEMK 830
Query: 1125 DAK 1127
DA+
Sbjct: 831 DAE 833
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 144/347 (41%), Gaps = 51/347 (14%)
Query: 539 TVKERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLS---------PDSGLWFSTYHLPL 589
T++ +GF + V ++W A + R+++ L+ P+ + +
Sbjct: 514 TIQPTAKREGF-ATVPDVTWANVGA---LQRVRLELNMAIVQPIKRPE---LYEKVGISA 566
Query: 590 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 649
PG +L+ GPPG GKT LAKAVA E + ++ ++ E IRQ +
Sbjct: 567 PGGVLLWGPPGCGKTLLAKAVAN--ESRANFISIKGPELLNKYVGESERSIRQVF----T 620
Query: 650 EALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP 709
A P ++ FD LD+++ D S+ S+ V+ L+ +D ++R
Sbjct: 621 RARASVPCVIFFDELDALV-PRRDTSLSESSSRVV---NTLLTELDGLNDRRG------- 669
Query: 710 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 769
I + + + I ++ GR D + + P E+ I++ + S ++ +
Sbjct: 670 IFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEE 729
Query: 770 A---SKCDGYDAYDLEILV-DRTVHAAVGRYLHS-------DSSFEKHIKPTLV---RDD 815
KC+ + DL LV + +V A ++ S D+ +K + V ++
Sbjct: 730 IIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEE 789
Query: 816 FSQAMHEFLPVAMRDITKTSAEGGRSGWDDVG---GLTDIQNAIKEM 859
M +F A+R I + ++ R +D + GLT+ +EM
Sbjct: 790 IIVTMSDFRS-ALRKIKPSVSDKDRLKYDRLNKKMGLTEEMKDAEEM 835
>sp|P33760|PEX6_YEAST Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX6 PE=1 SV=1
Length = 1030
Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 267/509 (52%), Gaps = 51/509 (10%)
Query: 587 LPLPGHILIHGPPGS-GKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII---RQ 642
+ L +L+H + GK ++ + +K L H + + SR II R
Sbjct: 472 ITLNASVLLHSTTNNVGKATMVRFASKYLGIHLLEIDCLSLTSNSRQLDSTSKIIGYIRA 531
Query: 643 ALSNFISEALDHAPSIVIFDNLDSI---ISSSSDPEGSQPSTSV-IALTKFLVDIMDEYG 698
N + A +P+++ +LDSI ++++ DPE + S+ ++K L D++
Sbjct: 532 KCENVLPYA---SPAVIFLAHLDSILLDVNANQDPEAIKLQKSINFEMSKLL----DDFT 584
Query: 699 EKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILE-----HE 753
K + FV S +++ +P S S RF+ + +P P+ ++R I + HE
Sbjct: 585 FKFPGT------TFVGSVNNIDNVPSSFRSHMRFE--ILVPVPSEAQRLRIFQWYLSSHE 636
Query: 754 I-----QRRSLECSDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI 807
+ Q+ + D I S G D++ +V+ A R+
Sbjct: 637 LNRDVQQKVPVSYMDNISFSSLSSYSAGLTPLDIKSIVETARMTATARFYQESKKCGWLP 696
Query: 808 KPTLV-RDDFSQAM----HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIEL 862
+ L+ ++D S+A +EF ++ + + WDD+GG+ ++ I + I++
Sbjct: 697 QSILITQEDLSKATSKARNEF------SVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDM 750
Query: 863 PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGAS 922
P K P +F ++ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG S
Sbjct: 751 PLKHPELFTSG-MKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGES 809
Query: 923 EQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEV-LT 979
E VR +F KA A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+
Sbjct: 810 EANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDAD 869
Query: 980 GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFP-SPRERLDILKVISRKLPLADDVDLEA 1038
GVFV AT+RPDLLD ALLRPGR D+LL+ P + ++L+IL+ ++RK L +DV L
Sbjct: 870 GVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIE 929
Query: 1039 IAHMTE-GFSGADLQALLSDAQLSAVHEI 1066
+A + ++GAD AL SDA L+A+ I
Sbjct: 930 LAKLCPFNYTGADFYALCSDAMLNAMSRI 958
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 401,505,166
Number of Sequences: 539616
Number of extensions: 16784572
Number of successful extensions: 64462
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 847
Number of HSP's that attempted gapping in prelim test: 59760
Number of HSP's gapped (non-prelim): 3775
length of query: 1134
length of database: 191,569,459
effective HSP length: 128
effective length of query: 1006
effective length of database: 122,498,611
effective search space: 123233602666
effective search space used: 123233602666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)