BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001165
(1134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q69ZJ7|RIC1_MOUSE Protein RIC1 homolog OS=Mus musculus GN=Kiaa1432 PE=2 SV=2
Length = 1422
Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 296/1177 (25%), Positives = 479/1177 (40%), Gaps = 202/1177 (17%)
Query: 1 MYMAYGWPQVIPLEQGLC-PSSQQIIYFKVNN----GLLLIASPCHIELWSSSQHKVRLG 55
MY GWP+ + LC P S V + + +P + +W S + V +
Sbjct: 1 MYFLSGWPKRL-----LCAPRSPAEAPLHVQSDPRRAFFAVLAPARLSIWYS-RPSVLIV 54
Query: 56 KYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQ-------ITEKSIQIGGK 108
YK ++S + G QA W PD+ +IAV T++ Y+ F + + E G
Sbjct: 55 TYKEPAKSSTQFGSYKQAEWRPDSTMIAVSTANGYILFFHITSSRGDKYLYEPVYPKGSP 114
Query: 109 QPSGLFFIK-------ISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKG 161
Q G+ K ++L + + L +S+ +++ D +L+ SDG L+ I W+G
Sbjct: 115 QMKGIPHFKEEHCAPALNLEMKKILDLQAPIMSLQSVLED---LLVATSDGLLHLIHWEG 171
Query: 162 EFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMR 221
G + S+ SV S G+F+ I +E C +
Sbjct: 172 MTNGRKAINLSTVPFSVDLQSSRV-----------GSFLGFADVHIKD----MEYCATLD 216
Query: 222 LLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVE 281
V++++G++ + + + + D C ++ + +++A G G V+
Sbjct: 217 GFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQ-DVIDGTCVAVNNKYRLMAFGCASGCVQ 275
Query: 282 LYDLAESASLIRTVSLYDWGMREVYYTFCRYSMDDTGPVSCIAWTPDNSAFAVGWKSRGL 341
+Y + + + + ++ + + TG V I W+PDNSA V W+ GL
Sbjct: 276 VYTIDNTTGAMLLSHKLELTAKQYPDIW-----NKTGAVKLIRWSPDNSAVIVTWEYGGL 330
Query: 342 TVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEG 401
++WSV G +L+ T+ + K +PL + M W GY L+ I
Sbjct: 331 SLWSVFGAQLICTL--------GGDFAYRSDGTKKDPLKINS--MSWGAEGYHLWVISGL 380
Query: 402 SSER---------------VLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTD- 445
S+ +L+F F K L + ++ GEDRL + E +
Sbjct: 381 GSQHTQIETDLRSTVKEPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQA 440
Query: 446 ----------ELKILHLNLPV--------------------------SYISQNWPVQHVA 469
E H P +Y+ NWP++ A
Sbjct: 441 QNPKYSSARAERMPRHEKSPFADGGLEAPGLSTLLGHRHWHVVQISSTYLESNWPIRFSA 500
Query: 470 ASKDGMFLAVAGLHGLILYDIRQKKWRVFGDITQEQK-IQSKGLLWLGKIIVVCNYIDSS 528
K G +AVAG G Y + KKW++FG+ITQEQ I + GL W +V+ Y S
Sbjct: 501 IDKLGQNIAVAGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWDDFMVLACYNLSD 560
Query: 529 NTYELLFYPRY-HLDQSSLLCRKSLLAKPIVMDVYEDYILVTYRPFDVHIFHVKLFGELT 587
EL Y R +LD + K+ + + +++ V+ D ++V + ++ ++ + +
Sbjct: 561 CQEELRIYLRTSNLDNAFAHVTKAPM-ETLLLSVFRDMVVVFRADCSICLYSIERKSDGS 619
Query: 588 PSTTPDLQLSTVRELSIMTAKSHPAAMRFIPDQVPRECSLNNHVSTSSDMLAREPARCLI 647
+TT +Q+ ++E+S+ HP + S N +S AR+ A ++
Sbjct: 620 -NTTASVQV--LQEVSMSRYIPHPF---LVVSVTLTSVSTENGISLKMPQQARD-AESIM 672
Query: 648 LRANGELSLLDLDDG----RERE----------------LTDSVELFWVTCGQLEEKTSL 687
L G+L ++ D RE++ L SVE W TC ++K L
Sbjct: 673 LNLAGQLIMMQRDRSGPQIREKDSHPNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRHL 732
Query: 688 IEEVSWLDYGYRGMQVWYPSPGVDPYKQEDFLQLDPELEFDREVYPLGLLPNAGVVVGV- 746
+E + WL G GM+VW P D K FL L F +YPL +L +V+G
Sbjct: 733 LEAL-WLSCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGAV 791
Query: 747 -------------SQRMSFSACTEFPCFEPTPQAQTILHCLLRHLLQRDKIEEALRLAQL 793
S R F E T +Q LH +LR LL R+ E+AL LAQ
Sbjct: 792 NDTLLYDSLYTRSSAREQLEVLFPFCVVERT--SQIYLHHILRQLLVRNLGEQALLLAQS 849
Query: 794 SAEKPHFSHCLEWLLFTVFDAEISRQNINKNQISIPKRAASFSLLEKTCNFIRNFPEYLN 853
A P+F H LE +L V + E + ++ I P LL FI FP +L
Sbjct: 850 CAALPYFPHVLELMLHEVLEEEAT----SREPIPDP-------LLPTVAKFITEFPLFLQ 898
Query: 854 VVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYSA 913
VV ARKT+ W LF+A G +LFEEC + TAA Y++++ +E PAVS+ A
Sbjct: 899 TVVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHA 958
Query: 914 LRLLQATLDECLYELAGELVRFL--LRSGREYEQASTDSDKLSPRFLGYFLFPSSYRRPS 971
L L++ ++L ++RFL + SG ST + + P G F F +R S
Sbjct: 959 TLLFNTALEQGKWDLCRHMIRFLKAIGSGESETPPSTPTSQ-EPSSSGGFEF---FRNRS 1014
Query: 972 LDKSTSFKEQSPNVASVKNILE---------------------------SHASYLMSGKE 1004
+ S S + P ++ L HA L+
Sbjct: 1015 ISLSQSAENVPPGKFGLQKTLSMPTGPSGKRWSKDSECAENMYIDMMLWRHARRLLEEVR 1074
Query: 1005 LSKLVAFVKGTQFDLVEYLQREGRVCARLENFASGLE 1041
L L F F+L+ +L +E AR++NF L+
Sbjct: 1075 LKDLGCFAAQLGFELISWLCKERTRAARVDNFVVALK 1111
>sp|Q4ADV7|RIC1_HUMAN Protein RIC1 homolog OS=Homo sapiens GN=KIAA1432 PE=1 SV=2
Length = 1423
Score = 262 bits (669), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 292/1174 (24%), Positives = 475/1174 (40%), Gaps = 195/1174 (16%)
Query: 1 MYMAYGWPQVIPLEQGLCP-SSQQIIYFKVNN----GLLLIASPCHIELWSSSQHKVRLG 55
MY GWP+ + LCP S F V + + + + +W S + V +
Sbjct: 1 MYFLSGWPKRL-----LCPLGSPAEAPFHVQSDPQRAFFAVLAAARLSIWYS-RPSVLIV 54
Query: 56 KYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQIT-------EKSIQIGGK 108
YK ++S + G QA W PD+ +IAV T++ Y+ F + T E G
Sbjct: 55 TYKEPAKSSTQFGSYKQAEWRPDSTMIAVSTANGYILFFHITSTRGDKYLYEPVYPKGSP 114
Query: 109 QPSGLFFIK-------ISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKG 161
Q G K ++L + + L +S+ +++ D +L+ SDG L+ I W+G
Sbjct: 115 QMKGTPHFKEEQCAPALNLEMRKILDLQAPIMSLQSVLED---LLVATSDGLLHLIHWEG 171
Query: 162 EFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMR 221
G + + SV S G+F+ I +E C +
Sbjct: 172 MTNGRKAINLCTVPFSVDLQSSRV-----------GSFLGFTDVHIRD----MEYCATLD 216
Query: 222 LLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVE 281
V++++G++ + + + + D C ++ + +++A G G V+
Sbjct: 217 GFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQ-DVVDGTCVAVNNKYRLMAFGCVSGSVQ 275
Query: 282 LYDLAESASLIRTVSLYDWGMREVYYTFCRYSMDDTGPVSCIAWTPDNSAFAVGWKSRGL 341
+Y + S + + ++ + + TG V + W+PDNS V W+ GL
Sbjct: 276 VYTIDNSTGAMLLSHKLELTAKQYPDIW-----NKTGAVKLMRWSPDNSVVIVTWEYGGL 330
Query: 342 TVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEG 401
++WSV G +L+ T+ + K +PL + M W GY L+ I
Sbjct: 331 SLWSVFGAQLICTL--------GGDFAYRSDGTKKDPLKINS--MSWGAEGYHLWVISGF 380
Query: 402 SSER---------------VLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLV-------V 439
S+ +L+F F K L + ++ GEDRL +
Sbjct: 381 GSQNTEIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQT 440
Query: 440 QSEDTDELKILH------------------------------LNLPVSYISQNWPVQHVA 469
Q+ + H + + +Y+ NWP++ A
Sbjct: 441 QNPRSSSTHSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTYLESNWPIRFSA 500
Query: 470 ASKDGMFLAVAGLHGLILYDIRQKKWRVFGDITQEQK-IQSKGLLWLGKIIVVCNYIDSS 528
K G +AV G G Y + KKW++FG+ITQEQ I + GL W +V+ Y +
Sbjct: 501 IDKLGQNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWNDFMVLACYNIND 560
Query: 529 NTYELLFYPRY-HLDQSSLLCRKSLLAKPIVMDVYEDYILVTYRPFDVHIFHVKLFGELT 587
EL Y R +LD + K+ A+ +++ V++D ++V + ++ ++ +
Sbjct: 561 RQEELRVYLRTSNLDNAFAHVTKAQ-AETLLLSVFQDMVIVFRADCSICLYSIERKSD-G 618
Query: 588 PSTTPDLQLSTVRELSIMTAKSHPAAMRFIPDQVPRECSLNNHVSTSSDMLAREPARCLI 647
P+TT +Q+ ++E+S+ HP + S N ++ AR A ++
Sbjct: 619 PNTTAGIQV--LQEVSMSRYIPHPF---LVVSVTLTSVSTENGITLKMPQQARG-AESIM 672
Query: 648 LRANGELSLLDLDDG----RERE-----------------LTDSVELFWVTCGQLEEKTS 686
L G+L ++ D RE++ L SVE W TC ++K
Sbjct: 673 LNLAGQLIMMQRDRSGPQIREKDSNPNNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRH 732
Query: 687 LIEEVSWLDYGYRGMQVWYPSPGVDPYKQEDFLQLDPELEFDREVYPLGLLPNAGVVVGV 746
L+E + WL G GM+VW P D K FL L F +YPL +L +V+G
Sbjct: 733 LLEAL-WLSCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGA 791
Query: 747 --------------SQRMSFSACTEFPCFEPTPQAQTILHCLLRHLLQRDKIEEALRLAQ 792
+ R F E T +Q LH +LR LL R+ E+AL LAQ
Sbjct: 792 VNDTLLYDSLYTRNNAREQLEVLFPFCVVERT--SQIYLHHILRQLLVRNLGEQALLLAQ 849
Query: 793 LSAEKPHFSHCLEWLLFTVFDAEISRQNINKNQISIPKRAASFSLLEKTCNFIRNFPEYL 852
A P+F H LE +L V + E + + IP LL FI FP +L
Sbjct: 850 SCATLPYFPHVLELMLHEVLEEEATSRE------PIPD-----PLLPTVAKFITEFPLFL 898
Query: 853 NVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYS 912
VV ARKT+ W LF+A G +LFEEC + TAA Y++++ +E PAVS+
Sbjct: 899 QTVVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQH 958
Query: 913 ALRLLQATLDECLYELAGELVRFLLRSGR-EYEQASTDSDKLSPRFLGYFLF-------- 963
A L L++ ++L ++RFL G E E + P G F F
Sbjct: 959 ATLLFNTALEQGKWDLCRHMIRFLKAIGSGESETPPSTPTAQEPSSSGGFEFFRNRSISL 1018
Query: 964 -------PSS----YRRPSLDKSTSFKEQSPNVASVKN-----ILESHASYLMSGKELSK 1007
P+S + S+ S K S + +N +L HA L+ L
Sbjct: 1019 SQSAENVPASKFSLQKTLSMPSGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLKD 1078
Query: 1008 LVAFVKGTQFDLVEYLQREGRVCARLENFASGLE 1041
L F F+L+ +L +E AR++NF L+
Sbjct: 1079 LGCFAAQLGFELISWLCKERTRAARVDNFVIALK 1112
>sp|Q9V3C5|RIC1_DROME Protein RIC1 homolog OS=Drosophila melanogaster GN=CG9063 PE=1 SV=1
Length = 1429
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 249/1039 (23%), Positives = 422/1039 (40%), Gaps = 177/1039 (17%)
Query: 1 MYMAYGWPQVIPLE--------QGLCPSSQQIIYFKVNNGLLLI--ASPCHIELWSSSQH 50
MY GWP+ + L + +C + +I+ V + L I A+P
Sbjct: 1 MYYPVGWPKRVGLALPGESASIRHICCDAVKILVAAVGDDFLGIWYANPL---------- 50
Query: 51 KVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQI----- 105
+ + ++R +S+++ G N VW PD++ +A++T+S L ++++ + I
Sbjct: 51 -IPIAYFRRTEDSLRQYGANQLIVWKPDSRQLALLTASGSLLLYQLDFEANGMGILQQID 109
Query: 106 ----GGKQPSGLFFIKIS---LVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSIS 158
K+ S FIK + L L E + + +LL L +
Sbjct: 110 PPAASLKRDSAELFIKENIPRLSLRELCSVTLGSVITTVCCISLSELLLATQSCELLRLQ 169
Query: 159 WKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCL 218
W EL H+ ND + ALS S+ + P SA L
Sbjct: 170 WT-------ELEHAENDLELPALS---------SIKLRDIPFYVQQQPQQSARNVPPLNR 213
Query: 219 PMRLLFVLYS---NGQLMSCSVSKKGLKLAEFIKIDKELGSG-------DAVCASIAPEQ 268
+ + YS G S + +A ++ + + G DA S+ +
Sbjct: 214 DSYVASLEYSPFIGGCAAVFSDRRAAFLIANHLRFETDHMHGFWVPDVEDASVCSVNHKF 273
Query: 269 QILAVGTRRGVVELYDLAESASLIRTVSLYDWGMREVYYTFCRYSM--DDTGPVSCIAWT 326
++LA G V++Y + ++ G+ + ++ D G V+ + W+
Sbjct: 274 RLLAYGQESSAVKVYAIDDATG----------GLEFSHRLILTENILPDSLGSVNELKWS 323
Query: 327 PDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMM 386
PD AV W + GL++WS G LMST+ ++ +V N PL +
Sbjct: 324 PDGCVLAVSWTNGGLSLWSTFGALLMSTLSWDF--GLNVDLVCQN------PLK--IRRL 373
Query: 387 QWDEYGYRLYAIE---EGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQ--- 440
+W GY+L+ ++ E VL F K L+ T ++ G+D L + Q
Sbjct: 374 EWSTEGYQLFMLKLHPEKDKSNVLQLQFVKSALSMNPCMTTSPHILLQGDDCLYLNQGNN 433
Query: 441 -----------------------SEDTDELKILH----------------LNLPVSYISQ 461
S D D L++ L LP++Y +
Sbjct: 434 LELTYAGSHGTFPSSGLGSDEDISGDGDCLELKQSPHTGSILTESKYWTVLQLPLNYAAT 493
Query: 462 NWPVQHVAASKDGMFLAVAGLHGLILYDIRQKKWRVFGDITQEQK-IQSKGLLWLGKIIV 520
NWP+++ A DG+ LAVAG GL Y + ++W++FG+ +QE+ + S GLLW +V
Sbjct: 494 NWPIRYAAIDPDGLHLAVAGRTGLAHYSLVTRRWKLFGNESQEKDFVVSGGLLWWHGFVV 553
Query: 521 VCNYIDSSNTYELLFYPRYHLDQSSLLCRKSLLAKPIVMDVYEDYILVTYRPFDVHIFHV 580
+ Y T EL YP + + + A I ++ + ++V V +F+
Sbjct: 554 MGCYSLLDRTDELRCYPADCKLDNQYGHKLQVRAPVISLNSFRHQLIVLTADGIVSLFN- 612
Query: 581 KLFGELTPSTTPDLQLSTVRELSIMTAKSHPAAMRFIPDQVPRECSLNNHVSTSSDMLAR 640
++ ++ L + EL + + HPA + + +L N + L
Sbjct: 613 -----MSKNSAYALDIECAYELDVKSICIHPACIVSL-----TVTNLKNELKPQGQ-LGG 661
Query: 641 EPARCLILRANGELSLLDLDDGRERE-------LTDSVELFWVTCGQLEEKTSLIEEVSW 693
+ A +I+ G + ++ D G + L VE+FW++ LE + + W
Sbjct: 662 DQAETIIVNVCGRILMIQRDAGEQVPNTLLATCLASCVEVFWLS-HSLER--CAMRDCLW 718
Query: 694 LDYGYRGMQVWYP--SPGVDPYKQED--------FLQLDPELEFDREVYPLGLLPNAGVV 743
L G GM+VW P PG + + E F+ L F ++YPL +L + +V
Sbjct: 719 LYSGAHGMRVWLPILPPGRERREGEQGGAQRLHSFMSKRIMLSFPLKLYPLVVLFDNVIV 778
Query: 744 VGVSQRMSFSACTEFPCFEPTP------QAQTILHCLLRHLLQRDKIEEALRLAQLSAEK 797
+GV + A + F P ++Q LH +LR L++R+ A +AQ
Sbjct: 779 LGVENESTLYANEQVSHFS-LPFAVMERKSQIYLHKVLRQLIKRNLGYSAWEMAQSCCSL 837
Query: 798 PHFSHCLEWLLFTVFDAEISRQNINKNQISIPKRAASFSLLEKTCNFIRNFPEYLNVVVS 857
P+F H A + + + K+ + L +FIR FP YL +V
Sbjct: 838 PYFPH-----------ALELLLHEVLEEEATSKQPIPDAQLPSILDFIREFPVYLETIVQ 886
Query: 858 VARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYSALRLL 917
ARKT+ W LFS AG+ +LF+ C Q TAA Y++++ LE VS+ A LL
Sbjct: 887 CARKTEIALWPYLFSMAGKPKDLFQMCLQSEQLDTAASYLIILQNLEPSVVSKQYATMLL 946
Query: 918 QATLDECLYELAGELVRFL 936
L + +ELA +L+RFL
Sbjct: 947 DIALQQRKWELAKDLIRFL 965
>sp|Q09417|RIC1_CAEEL Protein RIC1 homolog OS=Caenorhabditis elegans GN=R06F6.8 PE=3 SV=2
Length = 1470
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 22/269 (8%)
Query: 685 TSLIEEVSWLDYGYRGMQVWYP-SPGVDPYKQED--FLQLDPELEFDREVYPLGLLPNAG 741
+S + W+ G +G++VW P PG ++ F+ L F+ ++YP+ +
Sbjct: 713 SSHLSNALWIACGAKGIKVWMPLVPGKRNLATQEMTFIAKRIMLPFELDIYPIVISAKDC 772
Query: 742 VVVGVSQRMSFSA--------CTEFPCFEPTPQAQTILHCLLRHLLQRDKIEEALRLAQL 793
+ +GV ++ A + ++ +H LLR LL+R+ AL LA
Sbjct: 773 LAMGVESQLQHVARASRNQGQMESITMYGLHRNSEVFVHHLLRQLLKRNLGVFALELAGA 832
Query: 794 SAEKPHFSHCLEWLLFTVFDAEISRQNINKNQISIPKRAASFSLLEKTCNFIRNFPEYLN 853
PHF+H LE LL V + E + IP LL + FI FPE+L
Sbjct: 833 CRSLPHFTHALELLLHGVLEEEATSSE------PIPD-----PLLPRCVAFIHEFPEFLK 881
Query: 854 VVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYSA 913
V ARKT+ W LF G LFEEC Q + AA +++V+ LE VS A
Sbjct: 882 TVAHCARKTELALWRTLFDVTGSPNALFEECLQLKQLENAASFVIVLQNLETTEVSMDQA 941
Query: 914 LRLLQATLDECLYELAGELVRFLLRSGRE 942
RL++ L+E + +A E+VRF G E
Sbjct: 942 ARLVKEALEEKKWTIAKEMVRFARSIGSE 970
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/566 (18%), Positives = 221/566 (39%), Gaps = 70/566 (12%)
Query: 1 MYMAYGWPQVIPL---EQGLCPSSQQIIYFKVNNGLLLIASPCHIELWSSSQHKVRLGKY 57
M++ P V+ L E+ + + I + L+ +A+ I +W ++ +
Sbjct: 1 MFIPNDRPSVLQLPKHEKDSTAADIKSIVANRDRRLIAVATNDAIYIWLANPQLLLCSVG 60
Query: 58 KRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIK 117
D+ + GE + W PD+ IAV T+ + I+ + + + + +F +
Sbjct: 61 VIDANFKETRGELKEIYWKPDSTSIAVTTNQCKILIYNLDLRDDEQCYNFTDSADPYFQR 120
Query: 118 IS--LVLNEQLPFAEKG----LSVSNI----VSDNKHMLLGLSDGSLYSISWKGEFYGAF 167
S L + P A +++++I V L+ L +G + ++W GE +
Sbjct: 121 NSPELFIKGSRPTAHLHPTIIINLADIPTCCVPSRDEFLVCLQNGFTHHVTWTGEIIASL 180
Query: 168 ELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLF-VL 226
SS SV L S + S S I+ + P+ F ++
Sbjct: 181 SFRASSIPFSVDQLQSK--SENITS---------------KSTYIFDAVYAPLLGGFAIV 223
Query: 227 YSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVELYDLA 286
S+GQ + + + + DA C + + ++ G + G V Y++
Sbjct: 224 LSDGQGALLTSNDPNFAPNAILGVWAP-NMKDATCCDVNHKFLLILFGCKNGDVCAYNID 282
Query: 287 E-SASLIRTVSLYDWGMREVYYTFCRYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWS 345
E + SL+++ + T + GPV I + F W
Sbjct: 283 ELNGSLVQSFRVAPKVTNGPDLT------NRLGPVHRITALANGYGFGAIWSP------- 329
Query: 346 VSGC----RLMSTIRQISLSSISS--PIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIE 399
+SG RL++ S + +V+ +Q+ +Y + ++W G++L+
Sbjct: 330 LSGAHALPRLVAVFTSFGAQSFCNLEGVVEEDQNDRY-------TAIEWGPEGFQLWL-- 380
Query: 400 EGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKIL------HLN 453
G+ +++ F + + R V+ + ++L+ + D + H+
Sbjct: 381 -GTENELMMQPFVRSASCSSPAMEHCDRAVLMSDSQVLISAARDREAEACAPHSVWDHIT 439
Query: 454 LPVSYISQNWPVQHVAASKDGMFLAVAGLHGLILYDIRQKKWRVFGDITQEQKIQSKG-- 511
+ Y+S NWP+++ + ++ L VAG G+ + ++W++FG+ TQE+ + G
Sbjct: 440 VTHEYLSSNWPLRYASTDRNYKHLVVAGDQGMAYCSLSNRRWKIFGNETQEKNLLVTGGV 499
Query: 512 LLWLGKIIVVCNYIDSSNTYELLFYP 537
+W +I V ++ L FYP
Sbjct: 500 FIWNDDVIGVVGVAADTDKSHLSFYP 525
>sp|O42656|RIC1_SCHPO Protein ric1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ric1 PE=1 SV=2
Length = 1052
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 182/424 (42%), Gaps = 84/424 (19%)
Query: 320 VSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIV----------- 368
+SC W D+S+F GL G + S+ + + +S+PI+
Sbjct: 351 LSCGFWDRDSSSF------YGL------GSKNFSSTGEAEGTGLSTPIIAESLKENDEFF 398
Query: 369 ---KPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSS--ERVLIFSFGKCCLNRGVSGM 423
K N D +Y + Q D LY+I + + I F K + VS +
Sbjct: 399 AMEKENVDIQY--------LSQNDNTNDVLYSITDSKQFISTIYILPFLKSTI---VSSV 447
Query: 424 TYARQVIYGE--DRLLVVQSED-----TDELKIL---HLNLPVSYISQNWPVQHVAASKD 473
QV + DRL + +S + + I + P Y++ WP+++V+ D
Sbjct: 448 QSTLQVCGAQTSDRLYISKSYEFCSSVKNNFGIDFWDQVEYPQPYVASEWPIRYVSIKDD 507
Query: 474 GMFLAVAGLHGLILYDIRQKKWRVFGDITQEQKIQ-SKGLLWLGKII---VVCNYIDSSN 529
G +A+AGLHGL +Y +K W ++ D EQ I + ++W + + VVC +
Sbjct: 508 GSLIAIAGLHGLAIYVCSKKTWFLYKDANMEQLISVTCPMIWCSQFLLAGVVC-----ES 562
Query: 530 TYEL-LFYPRYHLDQSSLLCRKSLLAKPIVMDVYEDYILVTYRPFDVHIFHVKL-FGELT 587
+EL L+ + LD L + S + + M V ++Y LV Y D + H++ EL
Sbjct: 563 NFELHLYKAKGPLDDRENLAKLSFTSTIVTMSVCDEYSLVVYTA-DNFLHHIRFDINELG 621
Query: 588 PSTTPDLQLSTVRELSIMTAKSHPAAMRFIPDQVPRECSLNNHVSTSSDMLAREPARCLI 647
L+L + ++ + P+ +R I +P++ L N SD+L L+
Sbjct: 622 R-----LELDYLTSVNFAPIFTTPSRVRSITLLLPKD--LAN--IQPSDLLFYA---VLL 669
Query: 648 LRANGELSLLDLDDGRERE-------LTDSVELFWVTCGQLEEKTSLIEEVSWLDYGYRG 700
+ NG+L LL L +E L VE +++ Q E SL + W+ G +G
Sbjct: 670 VLINGKLVLLSLKKQHSKELLYQCSMLAGDVEFYFINGSQ--EIPSLFHSI-WIMTG-KG 725
Query: 701 MQVW 704
+++W
Sbjct: 726 LKLW 729
>sp|O24076|GBLP_MEDSA Guanine nucleotide-binding protein subunit beta-like protein
OS=Medicago sativa GN=GB1 PE=2 SV=1
Length = 325
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 17/131 (12%)
Query: 288 SASLIRTVSLYDWGMREVYYTFCRYSMDD----TGPVSCIAW---TPDNSAFAVGWKSRG 340
SAS RT+ L++ + E C+Y++ D + VSC+ + TP + + W R
Sbjct: 122 SASRDRTIKLWN-TLGE-----CKYTIQDGDAHSDWVSCVRFSPSTPQPTIVSASW-DRT 174
Query: 341 LTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWD-EYGYRLYAIE 399
+ VW+++ C+L +T+ S +++ V P+ G ++ WD G RLY+++
Sbjct: 175 VKVWNLTNCKLRNTLAGHS-GYVNTVAVSPDGSLCASGGKDGVILL-WDLAEGKRLYSLD 232
Query: 400 EGSSERVLIFS 410
GS L FS
Sbjct: 233 AGSIIHALCFS 243
>sp|Q8BHB4|WDR3_MOUSE WD repeat-containing protein 3 OS=Mus musculus GN=Wdr3 PE=2 SV=1
Length = 942
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 19/86 (22%)
Query: 259 AVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGMREVYYTFCRYSMDDTG 318
A+C+ P + + +GT+ G ++LYDLA S +L+ T++ +D G
Sbjct: 456 ALCSFFVPGDRQVVIGTKTGNLQLYDLA-SGTLLETIAAHD------------------G 496
Query: 319 PVSCIAWTPDNSAFAVGWKSRGLTVW 344
+ ++ +PD F G + + W
Sbjct: 497 ALWSMSLSPDQRGFVTGGADKAVKFW 522
>sp|Q9UNX4|WDR3_HUMAN WD repeat-containing protein 3 OS=Homo sapiens GN=WDR3 PE=1 SV=1
Length = 943
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 19/86 (22%)
Query: 259 AVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGMREVYYTFCRYSMDDTG 318
A+C+ P + + +GT+ G ++LYDLA S +L+ T+ +D G
Sbjct: 457 ALCSFFVPGDRQVVIGTKTGKLQLYDLA-SGNLLETIDAHD------------------G 497
Query: 319 PVSCIAWTPDNSAFAVGWKSRGLTVW 344
+ ++ +PD F G + + W
Sbjct: 498 ALWSMSLSPDQRGFVTGGADKSVKFW 523
>sp|O24456|GBLPA_ARATH Guanine nucleotide-binding protein subunit beta-like protein A
OS=Arabidopsis thaliana GN=RACK1A PE=1 SV=2
Length = 327
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 288 SASLIRTVSLYDWGMREVYYTFCRYSMDDTGPVSCIAWTPDN---SAFAVGWKSRGLTVW 344
SAS RT+ L++ + E YT VSC+ ++P+ + + W + + VW
Sbjct: 122 SASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW-DKTVKVW 179
Query: 345 SVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWD-EYGYRLYAIEEGSS 403
++S C+L ST+ + +S+ V P+ G ++ WD G +LY++E S
Sbjct: 180 NLSNCKLRSTLAGHT-GYVSTVAVSPDGSLCASGGKDGVVLL-WDLAEGKKLYSLEANSV 237
Query: 404 ERVLIFS 410
L FS
Sbjct: 238 IHALCFS 244
>sp|P49026|GBLP_TOBAC Guanine nucleotide-binding protein subunit beta-like protein
OS=Nicotiana tabacum GN=ARCA PE=2 SV=1
Length = 326
Score = 37.7 bits (86), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 310 CRYSMDDTGP----VSCIAWTPDN--SAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSI 363
C+Y++ D VSC+ ++P+N G R + +W+++ C+L T+ + +
Sbjct: 139 CKYTIQDGDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIWNLTNCKLRLTLAGHT-GYV 197
Query: 364 SSPIVKPNQDCKYEPLMSGTSMMQWD-EYGYRLYAIEEGSSERVLIFS 410
++P V P+ G ++ WD G +LY++E GS L FS
Sbjct: 198 NTPAVSPDGSLCASGGKDGV-ILLWDLAEGKKLYSLESGSIIHSLCFS 244
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 46/217 (21%)
Query: 266 PEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGMREVYYTFCRYSMDDTGPVSCIAW 325
P+ +LA G+ V L+D++ S L +TF + T V+ +A+
Sbjct: 1252 PDGSMLASGSSDKTVRLWDISSSKCL---------------HTFQGH----TNWVNSVAF 1292
Query: 326 TPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSM 385
PD S A G + + +W +S + + T Q S +SS P+ L SG+
Sbjct: 1293 NPDGSMLASGSGDQTVRLWEISSSKCLHTF-QGHTSWVSSVTFSPDGTM----LASGS-- 1345
Query: 386 MQWDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTD 445
D+ RL++I G CL + + VI+ D ++
Sbjct: 1346 ---DDQTVRLWSISSGE------------CLYTFLGHTNWVGSVIFSPDGAILASGSGDQ 1390
Query: 446 ELKILHLN----LPVSYISQNWPVQHVAASKDGMFLA 478
+++ ++ L NW V + S DG LA
Sbjct: 1391 TVRLWSISSGKCLYTLQGHNNW-VGSIVFSPDGTLLA 1426
>sp|Q39836|GBLP_SOYBN Guanine nucleotide-binding protein subunit beta-like protein
OS=Glycine max PE=2 SV=1
Length = 325
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 288 SASLIRTVSLYDWGMREVYYTFCRYSMDDTGP----VSCIAWTPDN---SAFAVGWKSRG 340
SAS RT+ L++ C+Y++ D VSC+ ++P + + W R
Sbjct: 122 SASRDRTIKLWN------TLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWD-RT 174
Query: 341 LTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWD-EYGYRLYAIE 399
+ VW+++ C+L +T+ + +++ V P+ G ++ WD G RLY+++
Sbjct: 175 VKVWNLTNCKLRNTLAGHN-GYVNTVAVSPDGSLCASGGKDGV-ILLWDLAEGKRLYSLD 232
Query: 400 EGSSERVLIFS 410
GS L FS
Sbjct: 233 AGSIIHALCFS 243
>sp|P33215|NEDD1_MOUSE Protein NEDD1 OS=Mus musculus GN=Nedd1 PE=2 SV=2
Length = 660
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 32/180 (17%)
Query: 199 FVSDHKFPIS-------SAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKID 251
F S HK P S + ++++ + L R++ S+ +L+ V+ L +F+
Sbjct: 201 FDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLVADTPLTAVDFM--- 257
Query: 252 KELGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGMREVYYTFCR 311
P+ LA+G+ RG + YDL S ++T+S + ++ + + +
Sbjct: 258 --------------PDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAF---Q 300
Query: 312 YSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTI-RQISLSSISSPIVKP 370
YS T + ++ N A AV R + V S SG S I R+ SI++ + +P
Sbjct: 301 YSTSLTK--ASLSKGSSNKATAV--NKRSVPVSSSSGAAQNSGIVREAPSPSIATVLPQP 356
>sp|Q10437|BUN62_SCHPO UBP9-binding protein bun62 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=bun62 PE=1 SV=1
Length = 543
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/168 (18%), Positives = 70/168 (41%), Gaps = 43/168 (25%)
Query: 264 IAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGMREVYYTFCRYSMDDTGPVSCI 323
+P+ Q LA+ + RG ++L+D + L +V++++ ++C+
Sbjct: 330 FSPDYQYLALVSERGTLKLFDFVKEHVL------------DVFHSYF-------AGLTCV 370
Query: 324 AWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCK-YEPLMSG 382
W+PD A+G K ++++S P+ K C+ ++ ++
Sbjct: 371 TWSPDGKFIAIGGKDDLVSIYSF-------------------PLRKLVARCQGHKSWVTD 411
Query: 383 TSMMQW--DEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQ 428
W D+ YR+ ++ G ++L++ F ++R S + Y
Sbjct: 412 VIFDAWRCDDDNYRIASV--GLDRKLLLWDFSVSAIHRPKSAVYYVNH 457
>sp|B3M1G0|WDR55_DROAN WD repeat-containing protein 55 homolog OS=Drosophila ananassae
GN=GF18399 PE=3 SV=1
Length = 481
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 263 SIAPEQQILAVGTRRGVVELYDLA-ESASLIRTVSLYDWGMREVYYT 308
S PE+ I+A+ T G V LY+ A E LIRT+ ++ R+V +T
Sbjct: 153 SFHPERNIIALATIIGDVHLYEYANEGNKLIRTIEVHSKACRDVEFT 199
>sp|Q10281|GBLP_SCHPO Guanine nucleotide-binding protein subunit beta-like protein
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rkp1 PE=1 SV=3
Length = 314
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 31/162 (19%)
Query: 256 SGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGMREVYYTFCRYSMD 315
+ D + SI+P+ + + G+R ++++++ + C+Y++
Sbjct: 105 TSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGN---------------------CKYTIT 143
Query: 316 DTGP---VSCIAWT--PDNSAF-AVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVK 369
D G VSC+ ++ PDN F + GW + + VW + L T +S+ +
Sbjct: 144 DGGHSDWVSCVRFSPNPDNLTFVSAGWD-KAVKVWDLETFSLR-TSHYGHTGYVSAVTIS 201
Query: 370 PNQDCKYEPLMSGTSMMQWD-EYGYRLYAIEEGSSERVLIFS 410
P+ GT +M WD LY++E ++ L+FS
Sbjct: 202 PDGSLCASGGRDGT-LMLWDLNESTHLYSLEAKANINALVFS 242
>sp|P38262|SIF2_YEAST SIR4-interacting protein SIF2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SIF2 PE=1 SV=2
Length = 535
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 244 LAEFIKIDKELGSGDAVCASI-AP-EQQILAVGTRRGVVELYDLAESASLIRTVSLYDWG 301
L F+KI KE+ D + +S P ++ ILA G + V L + E+ + W
Sbjct: 144 LDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY----WK 199
Query: 302 MREVY-----YTFCRYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRL 351
+ + + S T V+C+AW+ D ++ G ++ L +W+ +G L
Sbjct: 200 LTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALL 254
>sp|P25635|PWP2_YEAST Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2
Length = 923
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 35/174 (20%)
Query: 261 CASIAPEQQILAVGTRRGVVELYDLAE---------SASLIRTVS--------------- 296
C + P ++LAVG G LYDL + + + TVS
Sbjct: 265 CVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKL 324
Query: 297 ----LYDWGMREVYYTFCRYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLM 352
+Y+W E Y + D T + +A++PD S + + VW ++ +
Sbjct: 325 GQLLVYEW-QSESYILKQQGHFDST---NSLAYSPDGSRVVTASEDGKIKVWDITSGFCL 380
Query: 353 STIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSERV 406
+T + + S + K Q + + GT + WD YR + G +ER+
Sbjct: 381 ATFEEHTSSVTAVQFAKRGQ-VMFSSSLDGT-VRAWDLIRYRNFRTFTG-TERI 431
>sp|O93277|WDR1_CHICK WD repeat-containing protein 1 OS=Gallus gallus GN=WDR1 PE=2 SV=1
Length = 609
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 320 VSCIAWTPDNSAFAVGWKSRGLTVWSVS 347
V CIAW+PDN FA G + VW+VS
Sbjct: 537 VVCIAWSPDNEHFASGGMDMMVYVWTVS 564
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 44/239 (18%), Positives = 89/239 (37%), Gaps = 56/239 (23%)
Query: 256 SGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLY-DWGMREVYYTFCRYSM 314
S + +P+ Q +A G+ V+L+ + L++T++ + DW
Sbjct: 1197 SAGVITVRFSPDGQTIAAGSEDKTVKLWH-RQDGKLLKTLNGHQDW-------------- 1241
Query: 315 DDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIR-------QISLSSISSPI 367
V+ ++++PD A + + +W ++ +L+ T++ ++ SS I
Sbjct: 1242 -----VNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAI 1296
Query: 368 VKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYAR 427
++D ++ W+ +G L G SG YA
Sbjct: 1297 ASASRD---------NTIKLWNRHGIELETFT-------------------GHSGGVYAV 1328
Query: 428 QVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI 486
+ + + ++T L L P+ ++ N V V+ DG +A AG G I
Sbjct: 1329 NFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNI 1387
>sp|P93340|GBLP_NICPL Guanine nucleotide-binding protein subunit beta-like protein
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 326
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 310 CRYSMDDTGP----VSCIAWTPDN--SAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSI 363
C+Y + D VSC+ ++P+N G R + +W+++ C+L +T+ + +
Sbjct: 139 CKYIIQDGDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIWNLTNCKLRATLAGHT-GYV 197
Query: 364 SSPIVKPNQDCKYEPLMSGTSMMQWD-EYGYRLYAIEEGSSERVLIFS 410
++ V P+ G ++ WD G +LY++E GS L FS
Sbjct: 198 NTTAVSPDGSLCASGGKDGV-ILLWDLAEGKKLYSLESGSIIHSLCFS 244
>sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus GN=Wdr20 PE=1 SV=1
Length = 567
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 19/103 (18%)
Query: 254 LGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGMREVYYTFCRYS 313
+G G + +P+ + LA ++ G + +++ +SA L T+ Y G+
Sbjct: 216 VGEGALNEFAFSPDGKFLACVSQDGFLRVFNF-DSAELHGTMKSYFGGLL---------- 264
Query: 314 MDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIR 356
C+ W+PD G + +TVWS CR+++ R
Sbjct: 265 --------CLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGR 299
>sp|Q3BWZ0|RPOC_XANC5 DNA-directed RNA polymerase subunit beta' OS=Xanthomonas campestris
pv. vesicatoria (strain 85-10) GN=rpoC PE=3 SV=1
Length = 1404
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 36 IASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHI-F 94
I SP + E V LG Y ++GE + + + K A + LH
Sbjct: 490 ILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANTSEVKR-AYDNRVVELHAKV 548
Query: 95 KVQITEKSIQIGGKQPSGLFFIK-------ISLVLNEQLPF--AEKGLSVSNI--VSDNK 143
KV+IT+ ++ GGK+ SG + +S +L E LPF A ++ NI + ++
Sbjct: 549 KVRITQVDVEAGGKRSSGTSIVDTTVGRALLSEILPEGLPFQLANTEMTKKNISRLINSS 608
Query: 144 HMLLGLSDGSLYS 156
+ LLGL D +++
Sbjct: 609 YRLLGLKDTVVFA 621
>sp|Q8PNS9|RPOC_XANAC DNA-directed RNA polymerase subunit beta' OS=Xanthomonas axonopodis
pv. citri (strain 306) GN=rpoC PE=3 SV=1
Length = 1404
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 36 IASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHI-F 94
I SP + E V LG Y ++GE + + + K A + LH
Sbjct: 490 ILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANTSEVKR-AYDNRVVELHAKV 548
Query: 95 KVQITEKSIQIGGKQPSGLFFIK-------ISLVLNEQLPF--AEKGLSVSNI--VSDNK 143
KV+IT+ ++ GGK+ SG + +S +L E LPF A ++ NI + ++
Sbjct: 549 KVRITQVDVEAGGKRSSGTSIVDTTVGRALLSEILPEGLPFQLANTEMTKKNISRLINSS 608
Query: 144 HMLLGLSDGSLYS 156
+ LLGL D +++
Sbjct: 609 YRLLGLKDTVVFA 621
>sp|Q49UX4|SLE1_STAS1 N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sle1 PE=3 SV=1
Length = 327
Score = 34.3 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 317 TGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCK 375
T ++ + WT ++A KS G ++WS++ MS + SL++++S ++ PNQ K
Sbjct: 12 TSALAAVTWTNADAATTYKVKS-GDSLWSIANKYNMSVAKLKSLNNLTSNVIFPNQSLK 69
>sp|Q8TBZ3|WDR20_HUMAN WD repeat-containing protein 20 OS=Homo sapiens GN=WDR20 PE=1 SV=2
Length = 569
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 222 LLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAV--CASIAPEQQILAVGTRRGV 279
L V +S+G + +V A ++ K+ G AV C S + +L G
Sbjct: 164 LFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQ-GESFAVHTCKSKSTRNPLLKWTVGEGA 222
Query: 280 VELYDLAESASLIRTVS------LYDWGMREVYYTFCRYSMDDTGPVSCIAWTPDNSAFA 333
+ + + + VS ++++ E++ T Y G + C+ W+PD
Sbjct: 223 LNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSY----FGGLLCVCWSPDGKYIV 278
Query: 334 VGWKSRGLTVWSVSGCRLMS 353
G + +TVWS CR+++
Sbjct: 279 TGGEDDLVTVWSFVDCRVIA 298
>sp|P62884|GBLP_LEIIN Guanine nucleotide-binding protein subunit beta-like protein
OS=Leishmania infantum GN=LinJ28.2880 PE=2 SV=1
Length = 312
Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 88/221 (39%), Gaps = 43/221 (19%)
Query: 284 DLAESASLIRTVSLYDWGMREVYYTFCRYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTV 343
D A +AS R++ ++D + F +++ D V +A++PD+ + + V
Sbjct: 78 DYALTASWDRSIRMWDLRNGQCQRKFLKHTKD----VLAVAFSPDDRLIVSAGRDNVIRV 133
Query: 344 WSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSS 403
W+V+G + +R +SS P+ ++ ++SG+ WD +++ + G
Sbjct: 134 WNVAGECMHEFLRDGHEDWVSSICFSPS--LEHPIVVSGS----WDNT-IKVWNVNGGKC 186
Query: 404 ERVL-----------IFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHL 452
ER L + G C + G G + GE ++ +
Sbjct: 187 ERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGE--------------QLFKI 232
Query: 453 NLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLILYDIRQK 493
N+ P+ +A S + ++ VA L +YD+ K
Sbjct: 233 NVES-------PINQIAFSPNRFWMCVATERSLSVYDLESK 266
>sp|P62883|GBLP_LEICH Guanine nucleotide-binding protein subunit beta-like protein
OS=Leishmania chagasi PE=2 SV=1
Length = 312
Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 88/221 (39%), Gaps = 43/221 (19%)
Query: 284 DLAESASLIRTVSLYDWGMREVYYTFCRYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTV 343
D A +AS R++ ++D + F +++ D V +A++PD+ + + V
Sbjct: 78 DYALTASWDRSIRMWDLRNGQCQRKFLKHTKD----VLAVAFSPDDRLIVSAGRDNVIRV 133
Query: 344 WSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSS 403
W+V+G + +R +SS P+ ++ ++SG+ WD +++ + G
Sbjct: 134 WNVAGECMHEFLRDGHEDWVSSICFSPS--LEHPIVVSGS----WDNT-IKVWNVNGGKC 186
Query: 404 ERVL-----------IFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHL 452
ER L + G C + G G + GE ++ +
Sbjct: 187 ERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGE--------------QLFKI 232
Query: 453 NLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLILYDIRQK 493
N+ P+ +A S + ++ VA L +YD+ K
Sbjct: 233 NVES-------PINQIAFSPNRFWMCVATERSLSVYDLESK 266
>sp|A1L1K3|APC5_RAT Anaphase-promoting complex subunit 5 OS=Rattus norvegicus GN=Anapc5
PE=2 SV=1
Length = 727
Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 25/105 (23%)
Query: 771 LHCLLRHLLQRD-KIEEALRLAQLSAEKPHFSHCLEWLLFTVFDAEISRQNINKNQISIP 829
LHC H Q + ++EA+R+AQ S + HCL WL +
Sbjct: 295 LHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLY-----------------VLGQ 337
Query: 830 KRAASFSLLEKTCNFIRNF-------PEYLNVVVSVARKTDGRHW 867
KRA S+ LLE + +F + N ++ + +D HW
Sbjct: 338 KRADSYVLLEHSVKKAVHFGLPRAFAGKTANKLMDALKDSDLLHW 382
>sp|Q39336|GBLP_BRANA Guanine nucleotide-binding protein subunit beta-like protein
OS=Brassica napus GN=GB1 PE=2 SV=1
Length = 327
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 288 SASLIRTVSLYDWGMREVYYTFCRYSMDDTGPVSCIAWTPDNSAFAVGWKS--RGLTVWS 345
SAS RT+ L++ + E YT VSC+ ++P+ + S + + VW+
Sbjct: 122 SASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASCDKTVKVWN 180
Query: 346 VSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWD-EYGYRLYAIEEGSSE 404
+S C+L ST+ + +S+ V P+ G ++ WD G +LY++E S
Sbjct: 181 LSNCKLRSTLAGHT-GYVSTVAVSPDGSLCASGGKDGVVLL-WDLAEGKKLYSLEANSVI 238
Query: 405 RVLIFS 410
L F+
Sbjct: 239 HALCFT 244
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 407,832,216
Number of Sequences: 539616
Number of extensions: 16843659
Number of successful extensions: 37915
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 37821
Number of HSP's gapped (non-prelim): 127
length of query: 1134
length of database: 191,569,459
effective HSP length: 128
effective length of query: 1006
effective length of database: 122,498,611
effective search space: 123233602666
effective search space used: 123233602666
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)