BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001171
(1133 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 205/733 (27%), Positives = 316/733 (43%), Gaps = 97/733 (13%)
Query: 20 AYGEQNAVVLSEIQALTSFKLHLKDPLGALDGWDSSTPSAPCDWRGIVCYNNRVRELRLP 79
A G Q+ + EI L SFK L D L W S+ PC + G+ C +++V + L
Sbjct: 1 AMGSQS--LYREIHQLISFKDVLPDK-NLLPDWSSN--KNPCTFDGVTCRDDKVTSIDLS 55
Query: 80 RLQLAGRLTDQ--------------LADLH------------ELRKLSLHSNHLNGSIPA 113
L + L++ H L L L N L+G +
Sbjct: 56 SKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTT 115
Query: 114 --SLHQCSLLRAVYLQYNSF------SGHLPLSIFXXXXXXXXXXXXXXXSGKISADISP 165
SL CS L+ + + N+ SG L L+ G + +D
Sbjct: 116 LTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCG 175
Query: 166 SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL 225
L++L +S N +G++ + S L+ +++S N+FS +P +G L++L + N L
Sbjct: 176 ELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 232
Query: 226 YGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNL 285
G AIS C+ L L+ N G IP + +LQ LSL+ N+ TG +P L
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDF----L 286
Query: 286 WGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMD 345
G +L + L N F G V P G C + + NN + L + L+V+D
Sbjct: 287 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 346
Query: 346 LSGNFFSGNLPAAVGSLD-KLEVLRVANNSLSGLVPDEIAKC--SLLQMFDLEGNRFSGQ 402
LS N FSG LP ++ +L L L +++N+ SG + + + + LQ L+ N F+G+
Sbjct: 347 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 406
Query: 403 VPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRXXXXX 462
+P L L + L N SG IP S G+LS+L L L N + G IP+E+
Sbjct: 407 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 466
Query: 463 XXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGE 522
+N G++P S + +G+IP IG L L L LSN + SG
Sbjct: 467 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Query: 523 LPIELFGLPSLQVVSLEENNLSGDVPEGF---------SSLVGLQYL------------- 560
+P EL SL + L N +G +P + + G +Y+
Sbjct: 527 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHG 586
Query: 561 ------------------------NLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIP 596
N++ + G T+ S++FL +S+N +SG IP
Sbjct: 587 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 646
Query: 597 AELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSL 656
E+G+ L +L L N +G+IP ++ L + LDL NKL G IP+ +S + L +
Sbjct: 647 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 706
Query: 657 TLDMNSLSGRIPE 669
L N+LSG IPE
Sbjct: 707 DLSNNNLSGPIPE 719
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 244/511 (47%), Gaps = 43/511 (8%)
Query: 172 LSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPS 231
LS++ G + G F + L ++LS NS SG V T +
Sbjct: 81 LSNSHINGSVSG-FKCSASLTSLDLSRNSLSGPV----------------------TTLT 117
Query: 232 AISNCSSLVHLSAEDNVLKGLIPGTIG---RISTLQVLSLSRNELTGLVPVS-VLCNLWG 287
++ +CS L L+ N L PG + ++++L+VL LS N ++G V VL + G
Sbjct: 118 SLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCG 175
Query: 288 NISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLS 347
+ L I N +G V RCV+ LE LD+ +N P +L + ++L+ +D+S
Sbjct: 176 ELKHLAISG---NKISGDVDV--SRCVN-LEFLDVSSNNFSTGIP-FLGDCSALQHLDIS 228
Query: 348 GNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFL 407
GN SG+ A+ + +L++L +++N G +P K LQ L N+F+G++P FL
Sbjct: 229 GNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKS--LQYLSLAENKFTGEIPDFL 286
Query: 408 -GGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIP-EEITRXXXXXXXX 465
G L + L N F G +P FG+ S LE+L LS N+ G +P + + +
Sbjct: 287 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 346
Query: 466 XXYNKFGGKVPYDXXXXXXXXXXXX-SASGFSGKIPGSIGSLMR--LTTLDLSNQNLSGE 522
+N+F G++P S++ FSG I ++ + L L L N +G+
Sbjct: 347 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 406
Query: 523 LPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLV 582
+P L L + L N LSG +P SL L+ L L N G+IP ++++L
Sbjct: 407 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 466
Query: 583 FLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGE 642
L L N ++G IP+ L C+ L + L +N TG IP I L + L L N SG
Sbjct: 467 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Query: 643 IPKEISKCSSLVSLTLDMNSLSGRIPESFSK 673
IP E+ C SL+ L L+ N +G IP + K
Sbjct: 527 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Score = 149 bits (377), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 212/466 (45%), Gaps = 38/466 (8%)
Query: 261 STLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVL 320
++L L LSRN L+G PV+ L +L G+ S L+ + + N K G ++ LEVL
Sbjct: 97 ASLTSLDLSRNSLSG--PVTTLTSL-GSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 153
Query: 321 DLQNNRIR-AVFPSWLTN--VTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSG 377
DL N I A W+ + L+ + +SGN SG++ V LE L V++N+ S
Sbjct: 154 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 211
Query: 378 LVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQL 437
+P + CS LQ D+ GN+ SG + LK++++ N F G IP L L
Sbjct: 212 GIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSL 268
Query: 438 ETLNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSG 497
+ L+L+EN G IP+ ++ S + F G
Sbjct: 269 QYLSLAENKFTGEIPDFLS-----------------------GACDTLTGLDLSGNHFYG 305
Query: 498 KIPGSIGSLMRLTTLDLSNQNLSGELPIE-LFGLPSLQVVSLEENNLSGDVPEGFSSL-V 555
+P GS L +L LS+ N SGELP++ L + L+V+ L N SG++PE ++L
Sbjct: 306 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 365
Query: 556 GLQYLNLSDNAFTGDI--PATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSN 613
L L+LS N F+G I +L L L +N +G IP L CS L L L N
Sbjct: 366 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 425
Query: 614 HFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSK 673
+ +G IP + LS+++ L L N L GEIP+E+ +L +L LD N L+G IP S
Sbjct: 426 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Query: 674 XXXXXXXXXXXXXXXGAIPADLAXXXXXXXXXXXXXXXEGEIPKML 719
G IP + G IP L
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 202/722 (27%), Positives = 311/722 (43%), Gaps = 95/722 (13%)
Query: 31 EIQALTSFKLHLKDPLGALDGWDSSTPSAPCDWRGIVCYNNRVRELRLPRLQLAGRLTDQ 90
EI L SFK L D L W S+ PC + G+ C +++V + L L +
Sbjct: 13 EIHQLISFKDVLPDK-NLLPDWSSN--KNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAV 69
Query: 91 --------------LADLH------------ELRKLSLHSNHLNGSIPA--SLHQCSLLR 122
L++ H L L L N L+G + SL CS L+
Sbjct: 70 SSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLK 129
Query: 123 AVYLQYNSF------SGHLPLSIFXXXXXXXXXXXXXXXSGKISADISPSLRYLDLSSNA 176
+ + N+ SG L L+ G + +D L++L +S N
Sbjct: 130 FLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNK 189
Query: 177 FTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNC 236
+G++ + S L+ +++S N+FS +P +G L++L + N L G AIS C
Sbjct: 190 ISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTC 246
Query: 237 SSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQ 296
+ L L+ N G IP + +LQ LSL+ N+ TG +P L G +L +
Sbjct: 247 TELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDF----LSGACDTLTGLD 300
Query: 297 LGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLP 356
L N F G V P G C + + NN + L + L+V+DLS N FSG LP
Sbjct: 301 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 360
Query: 357 AAVGSLD-KLEVLRVANNSLSGLVPDEIAKC--SLLQMFDLEGNRFSGQVPAFLGGIRGL 413
++ +L L L +++N+ SG + + + + LQ L+ N F+G++P L L
Sbjct: 361 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 420
Query: 414 KIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGG 473
+ L N SG IP S G+LS+L L L N + G IP+E+ +N G
Sbjct: 421 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480
Query: 474 KVPYDXXXXXXXXXXXXSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSL 533
++P S + +G+IP IG L L L LSN + SG +P EL SL
Sbjct: 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 540
Query: 534 QVVSLEENNLSGDVPEGF---------SSLVGLQYL------------------------ 560
+ L N +G +P + + G +Y+
Sbjct: 541 IWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIR 600
Query: 561 -------------NLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEV 607
N++ + G T+ S++FL +S+N +SG IP E+G+ L +
Sbjct: 601 SEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFI 660
Query: 608 LELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRI 667
L L N +G+IP ++ L + LDL NKL G IP+ +S + L + L N+LSG I
Sbjct: 661 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720
Query: 668 PE 669
PE
Sbjct: 721 PE 722
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 244/511 (47%), Gaps = 43/511 (8%)
Query: 172 LSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPS 231
LS++ G + G F + L ++LS NS SG V T +
Sbjct: 84 LSNSHINGSVSG-FKCSASLTSLDLSRNSLSGPV----------------------TTLT 120
Query: 232 AISNCSSLVHLSAEDNVLKGLIPGTIG---RISTLQVLSLSRNELTGLVPVS-VLCNLWG 287
++ +CS L L+ N L PG + ++++L+VL LS N ++G V VL + G
Sbjct: 121 SLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCG 178
Query: 288 NISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLS 347
+ L I N +G V RCV+ LE LD+ +N P +L + ++L+ +D+S
Sbjct: 179 ELKHLAISG---NKISGDVDV--SRCVN-LEFLDVSSNNFSTGIP-FLGDCSALQHLDIS 231
Query: 348 GNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFL 407
GN SG+ A+ + +L++L +++N G +P K LQ L N+F+G++P FL
Sbjct: 232 GNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKS--LQYLSLAENKFTGEIPDFL 289
Query: 408 -GGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIP-EEITRXXXXXXXX 465
G L + L N F G +P FG+ S LE+L LS N+ G +P + + +
Sbjct: 290 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 349
Query: 466 XXYNKFGGKVPYDXXXXXXXXXXXX-SASGFSGKIPGSIGSLMR--LTTLDLSNQNLSGE 522
+N+F G++P S++ FSG I ++ + L L L N +G+
Sbjct: 350 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 409
Query: 523 LPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLV 582
+P L L + L N LSG +P SL L+ L L N G+IP ++++L
Sbjct: 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469
Query: 583 FLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGE 642
L L N ++G IP+ L C+ L + L +N TG IP I L + L L N SG
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 643 IPKEISKCSSLVSLTLDMNSLSGRIPESFSK 673
IP E+ C SL+ L L+ N +G IP + K
Sbjct: 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Score = 149 bits (376), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 212/466 (45%), Gaps = 38/466 (8%)
Query: 261 STLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVL 320
++L L LSRN L+G PV+ L +L G+ S L+ + + N K G ++ LEVL
Sbjct: 100 ASLTSLDLSRNSLSG--PVTTLTSL-GSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 156
Query: 321 DLQNNRIR-AVFPSWLTN--VTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSG 377
DL N I A W+ + L+ + +SGN SG++ V LE L V++N+ S
Sbjct: 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 214
Query: 378 LVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQL 437
+P + CS LQ D+ GN+ SG + LK++++ N F G IP L L
Sbjct: 215 GIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSL 271
Query: 438 ETLNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSG 497
+ L+L+EN G IP+ ++ S + F G
Sbjct: 272 QYLSLAENKFTGEIPDFLS-----------------------GACDTLTGLDLSGNHFYG 308
Query: 498 KIPGSIGSLMRLTTLDLSNQNLSGELPIE-LFGLPSLQVVSLEENNLSGDVPEGFSSL-V 555
+P GS L +L LS+ N SGELP++ L + L+V+ L N SG++PE ++L
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 556 GLQYLNLSDNAFTGDI--PATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSN 613
L L+LS N F+G I +L L L +N +G IP L CS L L L N
Sbjct: 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 428
Query: 614 HFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSK 673
+ +G IP + LS+++ L L N L GEIP+E+ +L +L LD N L+G IP S
Sbjct: 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Query: 674 XXXXXXXXXXXXXXXGAIPADLAXXXXXXXXXXXXXXXEGEIPKML 719
G IP + G IP L
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 164/289 (56%), Gaps = 18/289 (6%)
Query: 835 ATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHR 892
A+ F +N+L RG +G ++K DG +++++RL++ E F+ E E + HR
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHR 95
Query: 893 NLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
NL LRG+ P + RLLVY YM NG++A+ L+E + L+WP R I+LG ARGL+
Sbjct: 96 NLLRLRGFCMTPTE-RLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLA 153
Query: 953 FLHSL---DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
+LH ++H D+K N+L D +FEA + +FGL +L + G++G+++
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR--GTIGHIA 211
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKP---VMFTQDEDIV--KWVKKQLQRGQIXX 1064
PE STG+ +++ DV+ +G++LLE++TG++ D+D++ WVK L+ ++
Sbjct: 212 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEA 271
Query: 1065 XXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113
EE ++V LLCT P++RP M+++V MLEG
Sbjct: 272 LVDVDLQGNYKD----EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 163/289 (56%), Gaps = 18/289 (6%)
Query: 835 ATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHR 892
A+ F +N+L RG +G ++K DG +++++RL++ E F+ E E + HR
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 87
Query: 893 NLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
NL LRG+ P + RLLVY YM NG++A+ L+E + L+WP R I+LG ARGL+
Sbjct: 88 NLLRLRGFCMTPTE-RLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLA 145
Query: 953 FLHSL---DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
+LH ++H D+K N+L D +FEA + +FGL +L + G +G+++
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR--GXIGHIA 203
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKP---VMFTQDEDIV--KWVKKQLQRGQIXX 1064
PE STG+ +++ DV+ +G++LLE++TG++ D+D++ WVK L+ ++
Sbjct: 204 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEA 263
Query: 1065 XXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113
EE ++V LLCT P++RP M+++V MLEG
Sbjct: 264 LVDVDLQGNYKD----EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 124/223 (55%), Gaps = 19/223 (8%)
Query: 827 ITYVETLEATRQFDEE------NVLSRGRYGLIFKASYQDGMVLSIRRLR---DGTIDE- 876
++ E T FDE N + G +G+++K Y + +++++L D T +E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 877 -NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV- 934
F +E + + K +H NL L G+ + D+ LVY YMPNG +LL S DG
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMPNG---SLLDRLSCLDGTPP 129
Query: 935 LNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994
L+W MR I+ G A G++FLH +H DIK N+L D F A +S+FGL R A A+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQ 188
Query: 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTG 1037
+ +G+ Y++PEA G+ T ++D+YSFG+VLLEI+TG
Sbjct: 189 TVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 123/223 (55%), Gaps = 19/223 (8%)
Query: 827 ITYVETLEATRQFDEE------NVLSRGRYGLIFKASYQDGMVLSIRRLR---DGTIDE- 876
++ E T FDE N + G +G+++K Y + +++++L D T +E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 877 -NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV- 934
F +E + + K +H NL L G+ + D+ LVY YMPNG +LL S DG
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMPNG---SLLDRLSCLDGTPP 129
Query: 935 LNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994
L+W MR I+ G A G++FLH +H DIK N+L D F A +S+FGL R A A+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQ 188
Query: 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTG 1037
+G+ Y++PEA G+ T ++D+YSFG+VLLEI+TG
Sbjct: 189 TVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 124/225 (55%), Gaps = 19/225 (8%)
Query: 825 NKITYVETLEATRQFDEE------NVLSRGRYGLIFKASYQDGMVLSIRRLR---DGTID 875
+ ++ E T FDE N + G +G+++K Y + +++++L D T +
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 65
Query: 876 E--NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH 933
E F +E + + K +H NL L G+ + D+ LVY YMPNG +LL S DG
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMPNG---SLLDRLSCLDGT 121
Query: 934 V-LNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
L+W MR I+ G A G++FLH +H DIK N+L D F A +S+FGL R A
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKF 180
Query: 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTG 1037
A+ +G+ Y++PEA G+ T ++D+YSFG+VLLEI+TG
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 224
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 826 KITYVETLEATRQFDEENVLSRGRYGLIFKASYQDGMVLSI-RRLRDGTIDENTFRKEAE 884
++ V+ EAT FD + ++ G +G ++K +DG +++ RR + + F E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 885 ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIS 944
L +H +L L G+ + +L+Y YM NGNL L S ++W R I
Sbjct: 88 TLSFCRHPHLVSLIGF-CDERNEMILIYKYMENGNLKRHLY-GSDLPTMSMSWEQRLEIC 145
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+G ARGL +LH+ ++H D+K N+L D +F +++FG+ + + G+
Sbjct: 146 IGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL-GQTHLXXVVKGT 204
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV---KWVKKQLQRGQ 1061
LGY+ PE G+ T+++DVYSFG+VL E+L R ++ + ++V +W + GQ
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 1062 IXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112
+ + VK C A DRPSM D+++ LE
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVK----CLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 826 KITYVETLEATRQFDEENVLSRGRYGLIFKASYQDGMVLSI-RRLRDGTIDENTFRKEAE 884
++ V+ EAT FD + ++ G +G ++K +DG +++ RR + + F E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 885 ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIS 944
L +H +L L G+ + +L+Y YM NGNL L S ++W R I
Sbjct: 88 TLSFCRHPHLVSLIGF-CDERNEMILIYKYMENGNLKRHLY-GSDLPTMSMSWEQRLEIC 145
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+G ARGL +LH+ ++H D+K N+L D +F +++FG+ + + G+
Sbjct: 146 IGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD-QTHLXXVVKGT 204
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV---KWVKKQLQRGQ 1061
LGY+ PE G+ T+++DVYSFG+VL E+L R ++ + ++V +W + GQ
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 1062 IXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112
+ + VK C A DRPSM D+++ LE
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVK----CLALSSEDRPSMGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 119/223 (53%), Gaps = 19/223 (8%)
Query: 827 ITYVETLEATRQFDEE------NVLSRGRYGLIFKASYQDGMVLSIRRLR---DGTIDE- 876
++ E T FDE N G +G+++K Y + +++++L D T +E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 877 -NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV- 934
F +E + K +H NL L G+ + D+ LVY Y PNG +LL S DG
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDL-CLVYVYXPNG---SLLDRLSCLDGTPP 120
Query: 935 LNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994
L+W R I+ G A G++FLH +H DIK N+L D F A +S+FGL R A A+
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQ 179
Query: 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTG 1037
+ +G+ Y +PEA G+ T ++D+YSFG+VLLEI+TG
Sbjct: 180 XVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG 221
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 118/220 (53%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ ++ ++I+ L+ GT+ +F +EA+ + K+KH L L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L++ +G L P ++ +A G++++ ++ +H D+
Sbjct: 77 PI--YIVTEYMNKGSLLDFLKDG---EGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDL 131
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 132 RSANILVGNGLICKIADFGLARL-----IEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E++T GR P + +++ +Q++RG
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNNREVL----EQVERG 222
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 126/254 (49%), Gaps = 25/254 (9%)
Query: 820 LVMFNNKITYVETLEATRQFDEE---------NVLSRGRYGLI----FKASYQDGMVLSI 866
L F + TY + + +F +E V+ G +G + K + + ++I
Sbjct: 19 LRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 867 RRLRDGTIDEN--TFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLL 924
+ L+ G ++ F EA +G+ H N+ L G V ++V +YM NG+L + L
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFL 137
Query: 925 QEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEF 982
++ H + + L+ + G+A G+ +L + VH D+ +N+L +++ +S+F
Sbjct: 138 RK------HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 983 GLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPV 1041
GL R+ P A ++ + + SPEA + + T +DV+S+GIVL E+++ G +P
Sbjct: 192 GLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 1042 MFTQDEDIVKWVKK 1055
++D++K V +
Sbjct: 252 WEMSNQDVIKAVDE 265
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKE 882
+ + L+AT + V+ G +G + K + + ++I+ L+ G ++ F E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
A +G+ H N+ L G V ++V +YM NG+L + L++ H + + L
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFTVIQL 120
Query: 943 ISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+ P A ++
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + SPEA + + T +DV+S+GIVL E+++ G +P ++D++K V +
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 236
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii-
38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKE 882
+ + L+AT + V+ G +G + K + + ++I+ L+ G ++ F E
Sbjct: 26 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
A +G+ H N+ L G V ++V +YM NG+L + L++ H + + L
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFTVIQL 137
Query: 943 ISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+ P A ++
Sbjct: 138 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + SPEA + + T +DV+S+GIVL E+++ G +P ++D++K V +
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 253
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKE 882
+ + L+AT + V+ G +G + K + + ++I+ L+ G ++ F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
A +G+ H N+ L G V ++V +YM NG+L + L++ H + + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFTVIQL 149
Query: 943 ISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+ P A ++
Sbjct: 150 VGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + SPEA + + T +DV+S+GIVL E+++ G +P ++D++K V +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKE 882
+ + L+AT + V+ G +G + K + + ++I+ L+ G ++ F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
A +G+ H N+ L G V ++V +YM NG+L + L++ H + + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFTVIQL 149
Query: 943 ISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+ P A ++
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + SPEA + + T +DV+S+GIVL E+++ G +P ++D++K V +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 123/246 (50%), Gaps = 25/246 (10%)
Query: 828 TYVETLEATRQFDEE---------NVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTI 874
TY + + +F +E V+ G +G + K + + ++I+ L+ G
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 875 DEN--TFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
++ F EA +G+ H N+ L G V ++V +YM NG+L + L++
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------ 137
Query: 933 HVLNWPMRHLISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990
H + + L+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+
Sbjct: 138 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
P A ++ + + SPEA + + T +DV+S+GIVL E+++ G +P ++D+
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 257
Query: 1050 VKWVKK 1055
+K V +
Sbjct: 258 IKAVDE 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Phosphorylated,
Amp-pnp Bound
Length = 373
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 123/246 (50%), Gaps = 25/246 (10%)
Query: 828 TYVETLEATRQFDEE---------NVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTI 874
TY + + +F +E V+ G +G + K + + ++I+ L+ G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 875 DEN--TFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
++ F EA +G+ H N+ L G V ++V +YM NG+L + L++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------ 139
Query: 933 HVLNWPMRHLISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990
H + + L+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
P A ++ + + SPEA + + T +DV+S+GIVL E+++ G +P ++D+
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 1050 VKWVKK 1055
+K V +
Sbjct: 260 IKAVDE 265
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKE 882
+ + L+AT + V+ G +G + K + + ++I+ L+ G ++ F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
A +G+ H N+ L G V ++V +YM NG+L + L++ H + + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFTVIQL 149
Query: 943 ISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+ P A ++
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + SPEA + + T +DV+S+GIVL E+++ G +P ++D++K V +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 127/251 (50%), Gaps = 25/251 (9%)
Query: 823 FNNKITYVETLEATRQFDEE---------NVLSRGRYGLI----FKASYQDGMVLSIRRL 869
F + T+ + +A R+F +E V+ G +G + K + + ++I+ L
Sbjct: 6 FVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL 65
Query: 870 RDGTIDEN--TFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEA 927
+ G D+ F EA +G+ H N+ L G V +++ +YM NG+L L++
Sbjct: 66 KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV-MIITEYMENGSLDAFLRK- 123
Query: 928 SHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985
DG + + L+ + G+ G+ +L + VH D+ +N+L +++ +S+FG+
Sbjct: 124 --NDGR---FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFT 1044
R+ P A ++ + + +PEA + + T +DV+S+GIV+ E+++ G +P
Sbjct: 179 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
Query: 1045 QDEDIVKWVKK 1055
++D++K +++
Sbjct: 239 SNQDVIKAIEE 249
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g
Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKE 882
+ + L+AT + V+ G +G + K + + ++I+ L+ G ++ F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
A +G+ H N+ L G V ++V +YM NG+L + L++ H + + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFTVIQL 149
Query: 943 ISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+ P A ++
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + SPEA + + T +DV+S+GIVL E+++ G +P ++D++K V +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.8 bits (216), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P +S +A G++++ ++ VH D+
Sbjct: 83 P--IYIVTEYMNKGSLLDFLK---GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 138 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKE 882
+ + L+AT + V+ G +G + K + + ++I+ L+ G ++ F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
A +G+ H N+ L G V ++V +YM NG+L + L++ H + + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEYMENGSLDSFLRK------HDAQFTVIQL 149
Query: 943 ISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+ P A ++
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + SPEA + + T +DV+S+GIVL E+++ G +P ++D++K V +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 119/220 (54%), Gaps = 17/220 (7%)
Query: 842 ENVLSRGRYGLIFK-----ASYQDGMVLSIRRLRDGTIDENT--FRKEAEALGKVKHRNL 894
+ V+ G +G ++K +S + + ++I+ L+ G ++ F EA +G+ H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLS 952
L G + + +++ +YM NG L L+E +DG + + L+ + G+A G+
Sbjct: 109 IRLEGVISKYKPM-MIITEYMENGALDKFLRE---KDGE---FSVLQLVGMLRGIAAGMK 161
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
+L +++ VH D+ +N+L +++ +S+FGL R+ P +++ + + +PEA
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 1013 ASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVK 1051
S + T +DV+SFGIV+ E++T G +P + +++K
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK 261
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 76 P--IXIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 130
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 131 RAANILVGENLVCKVADFGLARL-----IEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 221
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P +S +A G++++ ++ VH D+
Sbjct: 83 P--IYIVTEYMNKGSLLDFLK---GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 138 RAANILVGENLVCKVADFGLARL-----IEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 228
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.4 bits (215), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 79 P--IYIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 133
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 134 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 189 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Pyrazolopyrimidine 5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src Tyrosine
Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.0 bits (214), Expect = 5e-17, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 86 P--IYIVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 141 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 231
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.0 bits (214), Expect = 6e-17, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 86 P--IYIVIEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 141 RAANILVGENLVCKVADFGLARL-----IEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 231
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 116/223 (52%), Gaps = 18/223 (8%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
E L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVH 961
+ P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH
Sbjct: 249 SEEPI--YIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 962 GDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQP 1018
D++ N+L + +++FGL RL E + T G+ + + +PEAA G+
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 1019 TKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
T ++DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 397
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 116/223 (52%), Gaps = 18/223 (8%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
E L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVH 961
+ P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH
Sbjct: 249 SEEPI--YIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 962 GDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQP 1018
D++ N+L + +++FGL RL E + T G+ + + +PEAA G+
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 1019 TKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
T ++DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 397
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.7 bits (213), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 86 P--IYIVIEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 141 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 231
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.7 bits (213), Expect = 8e-17, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 77 P--IYIVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 131
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 132 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 187 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 222
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In Complex
With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds That
Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 86.7 bits (213), Expect = 8e-17, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 86 P--IYIVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 141 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 231
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc1
Length = 275
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 75 P--IYIVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 129
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 130 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 185 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 220
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 86.3 bits (212), Expect = 9e-17, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
E L G++G ++ A+Y ++++ ++ G++ F EA + ++H L L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVLNWPMRHLI--SLGLARGLSFLHSL 957
P ++ ++M G+L L+ E S Q P+ LI S +A G++F+
Sbjct: 80 TKEP--IYIITEFMAKGSLLDFLKSDEGSKQ-------PLPKLIDFSAQIAEGMAFIEQR 130
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ 1017
+ +H D++ N+L A +++FGL R + E ++ + + +PEA + G
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGS 188
Query: 1018 PTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
T ++DV+SFGI+L+EI+T GR P + +++ + L+RG
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI----RALERG 228
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 86.3 bits (212), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 86 P--IYIVCEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 141 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 231
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 116/223 (52%), Gaps = 18/223 (8%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
E L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVH 961
+ P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH
Sbjct: 332 SEEPI--YIVTEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 962 GDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQP 1018
D++ N+L + +++FGL RL E + T G+ + + +PEAA G+
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 1019 TKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
T ++DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 480
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf
12058
Length = 285
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 116/223 (52%), Gaps = 16/223 (7%)
Query: 842 ENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLT 895
E V+ G +G + K + + ++I+ L+ G D+ F EA +G+ H N+
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSF 953
L G V +++ +YM NG+L L++ DG + + L+ + G+ G+ +
Sbjct: 73 HLEGVVTKCKPV-MIITEYMENGSLDAFLRK---NDGR---FTVIQLVGMLRGIGSGMKY 125
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
L + VH D+ +N+L +++ +S+FG+ R+ P A ++ + + +PEA
Sbjct: 126 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 1014 STGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + T +DV+S+GIV+ E+++ G +P ++D++K +++
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 228
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 116/223 (52%), Gaps = 18/223 (8%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
E L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVH 961
+ P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH
Sbjct: 249 SEEPI--YIVGEYMSKGSLLDFLK---GETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 962 GDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQP 1018
D++ N+L + +++FGL RL E + T G+ + + +PEAA G+
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 1019 TKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
T ++DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 397
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 116/223 (52%), Gaps = 16/223 (7%)
Query: 842 ENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDENT--FRKEAEALGKVKHRNLT 895
E V+ G +G + K + + ++I+ L+ G D+ F EA +G+ H N+
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSF 953
L G V +++ +YM NG+L L++ DG + + L+ + G+ G+ +
Sbjct: 79 HLEGVVTKCKPV-MIITEYMENGSLDAFLRK---NDGR---FTVIQLVGMLRGIGSGMKY 131
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
L + VH D+ +N+L +++ +S+FG+ R+ P A ++ + + +PEA
Sbjct: 132 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 1014 STGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + T +DV+S+GIV+ E+++ G +P ++D++K +++
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 234
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 121/236 (51%), Gaps = 17/236 (7%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKE 882
+ + L+AT + V+ G +G + K + + ++I+ L+ G ++ F E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
A +G+ H N+ L G V ++V + M NG+L + L++ H + + L
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEXMENGSLDSFLRK------HDAQFTVIQL 120
Query: 943 ISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+ P A ++
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + SPEA + + T +DV+S+GIVL E+++ G +P ++D++K V +
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 236
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Inhibitor
Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 85.5 bits (210), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 114/220 (51%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 86 P--IYIVMEYMSKGCLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 141 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 231
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 114/220 (51%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 86 P--IYIVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 141 AAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 231
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 30/224 (13%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
E L G++G ++ A+Y ++++ ++ G++ F EA + ++H L L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVLNWPMRHLI--SLGLARGLSFLHSL 957
P ++ ++M G+L L+ E S Q P+ LI S +A G++F+
Sbjct: 247 TKEPI--YIITEFMAKGSLLDFLKSDEGSKQ-------PLPKLIDFSAQIAEGMAFIEQR 297
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ 1017
+ +H D++ N+L A +++FGL R+ P + + +PEA + G
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARVGAKFP------------IKWTAPEAINFGS 345
Query: 1018 PTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
T ++DV+SFGI+L+EI+T GR P + +++ + L+RG
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI----RALERG 385
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 114/220 (51%), Gaps = 18/220 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L +G +G ++ ++ ++I+ L+ GT+ F +EA+ + K++H L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
P +V +YM G L L+ + G L P ++ +A G++++ ++ VH D+
Sbjct: 86 P--IYIVTEYMSKGCLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTKE 1021
+ N+L + +++FGL RL E + T G+ + + +PEAA G+ T +
Sbjct: 141 RAANILVGENLVCKVADFGLARL-----IEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
+DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 231
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 121/236 (51%), Gaps = 17/236 (7%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKE 882
+ + L+AT + V+ G +G + K + + ++I+ L+ G ++ F E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
A +G+ H N+ L G V ++V + M NG+L + L++ H + + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEXMENGSLDSFLRK------HDAQFTVIQL 149
Query: 943 ISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+ P A ++
Sbjct: 150 VGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + SPEA + + T +DV+S+GIVL E+++ G +P ++D++K V +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE 265
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 25/246 (10%)
Query: 828 TYVETLEATRQFDEE---------NVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTI 874
TY + + +F +E V+ G +G + K + + ++I+ L+ G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 875 DEN--TFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
++ F EA +G+ H N+ L G V ++V + M NG+L + L++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-MIVTEXMENGSLDSFLRK------ 139
Query: 933 HVLNWPMRHLISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990
H + + L+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
P A ++ + + SPEA + + T +DV+S+GIVL E+++ G +P ++D+
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 1050 VKWVKK 1055
+K V +
Sbjct: 260 IKAVDE 265
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 117/223 (52%), Gaps = 16/223 (7%)
Query: 842 ENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLT 895
E V+ G +G + K + + ++I+ L+ G ++ F EA +G+ H N+
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSF 953
L G V ++V +YM NG+L T L++ Q + + L+ + G++ G+ +
Sbjct: 87 HLEGVVTKSKPV-MIVTEYMENGSLDTFLKKNDGQ------FTVIQLVGMLRGISAGMKY 139
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
L + VH D+ +N+L +++ +S+FGL R+ P A ++ + + +PEA
Sbjct: 140 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 1014 STGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + T +DV+S+GIV+ E+++ G +P ++D++K V++
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEE 242
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
E L G++G ++ A+Y ++++ ++ G++ F EA + ++H L L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVLNWPMRHLI--SLGLARGLSFLHSL 957
P ++ ++M G+L L+ E S Q P+ LI S +A G++F+
Sbjct: 253 TKEPI--YIITEFMAKGSLLDFLKSDEGSKQ-------PLPKLIDFSAQIAEGMAFIEQR 303
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ 1017
+ +H D++ N+L A +++FGL R + E ++ + + +PEA + G
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGS 361
Query: 1018 PTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
T ++DV+SFGI+L+EI+T GR P + +++ + L+RG
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI----RALERG 401
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 115/223 (51%), Gaps = 18/223 (8%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
E L +G +G ++ ++ ++I+ L+ G + F +EA+ + K++H L L
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVH 961
+ P +V +YM G+L L+ + G L P ++ +A G++++ ++ VH
Sbjct: 250 SEEPI--YIVTEYMSKGSLLDFLK---GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 962 GDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQP 1018
D++ N+L + +++FGL RL E + T G+ + + +PEAA G+
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRL-----IEDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 1019 TKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
T ++DV+SFGI+L E+ T GR P + +++ Q++RG
Sbjct: 360 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----DQVERG 398
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 131/263 (49%), Gaps = 35/263 (13%)
Query: 820 LVMFNNKITYVETLEATRQFDEE---------NVLSRGRYGLI----FKASYQDGMVLSI 866
+ +F + T+ + EA R+F +E V+ G +G + K + + ++I
Sbjct: 7 MKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAI 66
Query: 867 RRLRDGTIDEN--TFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLL 924
+ L+ G ++ F EA +G+ H N+ L G V +++ ++M NG+L + L
Sbjct: 67 KTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-MIITEFMENGSLDSFL 125
Query: 925 QEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEF 982
++ Q + + L+ + G+A G+ +L ++ VH D+ +N+L +++ +S+F
Sbjct: 126 RQNDGQ------FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDF 179
Query: 983 GLDRLAIATPAEASSSTTPIGSLG------YVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
GL R + +S T +LG + +PEA + T +DV+S+GIV+ E+++
Sbjct: 180 GLSRFL----EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
Query: 1037 -GRKPVMFTQDEDIVKWVKKQLQ 1058
G +P ++D++ +++ +
Sbjct: 236 YGERPYWDMTNQDVINAIEQDYR 258
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 71 RHPNILRLYGYFHDATRV-YLILEYAPRGEVYKELQKLSKFDEQRTA-----TYITELAN 124
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 179
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 147/349 (42%), Gaps = 64/349 (18%)
Query: 33 QALTSFKLHLKDPLGALDGWDSSTPSAPCDWRGIVCYNNRVRELRLPRLQLAGRLTDQLA 92
QAL K L +P L W +T W G++C + + R+ L L+G
Sbjct: 9 QALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLC-DTDTQTYRVNNLDLSG------- 59
Query: 93 DLHELRKLSLHSNHLNGSIPASLHQCSLLRAVYLQ-YNSFSGHLPLSIFXXXXXXXXXXX 151
L+L + IP+SL L +Y+ N+ G +P +I
Sbjct: 60 -------LNLPKPY---PIPSSLANLPYLNFLYIGGINNLVGPIPPAI------------ 97
Query: 152 XXXXSGKISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQ 211
K++ L YL ++ +G IP S L ++ SYN+ SG +P S+
Sbjct: 98 -----AKLT-----QLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 212 LQELEYLWLDSNHLYGTLPSAISNCSSL-VHLSAEDNVLKGLIPGTIGRISTLQVLSLSR 270
L L + D N + G +P + + S L ++ N L G IP T ++ L + LSR
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR 206
Query: 271 NELTGLVPVSVLCNLWGNISSLRIVQLGFNAF------TGVVKPPNGRCVSVLEVLDLQN 324
N L G V L+G+ + + + L N+ G+ K NG LDL+N
Sbjct: 207 NMLEGDASV-----LFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNG--------LDLRN 253
Query: 325 NRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANN 373
NRI P LT + L +++S N G +P G+L + +V ANN
Sbjct: 254 NRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANN 301
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 4/222 (1%)
Query: 331 FPSWLTNVTSLRVMDLSG-NFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLL 389
PS L N+ L + + G N G +P A+ L +L L + + ++SG +PD +++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 390 QMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLET-LNLSENDIR 448
D N SG +P + + L ++ N SG IP S+G+ S+L T + +S N +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 449 GNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGKIPGSIGSLMR 508
G IP N G + + + + G +G
Sbjct: 188 GKIPPTFANLNLAFVDLSR-NMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKN 245
Query: 509 LTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEG 550
L LDL N + G LP L L L +++ NNL G++P+G
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
Query: 499 IPGSIGSLMRLTTLDLSN-QNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGL 557
IP S+ +L L L + NL G +P + L L + + N+SG +P+ S + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 558 QYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSAL-EVLELRSNHFT 616
L+ S NA +G +P + L +LV ++ N+ISG IP G+ S L + + N T
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 617 GNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLS---GRIPESFSK 673
G IP ++L+ + +DL +N L G+ + + L NSL+ G++ SK
Sbjct: 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV--GLSK 244
Query: 674 XXXXXXXXXXXXXXXGAIPADLAXXXXXXXXXXXXXXXEGEIPKMLSSRFNDPSIFAMNR 733
G +P L GEIP+ + + D S +A N+
Sbjct: 245 --NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302
Query: 734 ELCGKPL 740
LCG PL
Sbjct: 303 CLCGSPL 309
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 36/252 (14%)
Query: 205 VPASVGQLQELEYLWLDS-NHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTL 263
+P+S+ L L +L++ N+L G +P AI+ + L +L + G IP + +I TL
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 264 QVLSLSRNELTGLVP--VSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLD 321
L S N L+G +P +S L NL G + N +G + G + +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVG-------ITFDGNRISGAIPDSYGSFSKLFTSMT 180
Query: 322 LQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPD 381
+ NR+ P N+ +L +DLS N G+ GS + + +A NSL+
Sbjct: 181 ISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA----- 234
Query: 382 EIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLN 441
FDL G+V G + L + L N G +P L L +LN
Sbjct: 235 ----------FDL------GKV----GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 442 LSENDIRGNIPE 453
+S N++ G IP+
Sbjct: 275 VSFNNLCGEIPQ 286
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 106/268 (39%), Gaps = 52/268 (19%)
Query: 355 LPAAVGSLDKLEVLRVAN-NSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGL 413
+P+++ +L L L + N+L G +P IAK + L + SG +P FL I+ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 414 KIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGG 473
+ N SG +P S +L L + N I G IP+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD-------------------- 167
Query: 474 KVPYDXXXXXXXXXXXXSASGFSGKIPGSIGSLMRL-TTLDLSNQNLSGELPIELFGLPS 532
S GS +L T++ +S L+G++P L +
Sbjct: 168 ----------------------------SYGSFSKLFTSMTISRNRLTGKIPPTFANL-N 198
Query: 533 LQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQIS 592
L V L N L GD F S Q ++L+ N+ D+ G ++L L L +N+I
Sbjct: 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIY 257
Query: 593 GMIPAELGACSALEVLELRSNHFTGNIP 620
G +P L L L + N+ G IP
Sbjct: 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 132/272 (48%), Gaps = 34/272 (12%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYYAGP 904
G +G + +A + G ++++ L + N F +E + +++H N+ + G P
Sbjct: 48 GSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD--MVHG 962
P++ + V +Y+ G+L LL ++ ++ L+ R ++ +A+G+++LH+ + +VH
Sbjct: 107 PNLSI-VTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
++K N+L D + + +FGL RL +T SS + G+ +++PE +++
Sbjct: 164 NLKSPNLLVDKKYTVKVCDFGLSRLKAST---FLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 1023 DVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEE 1082
DVYSFG++L E+ T ++P +V V + +R +I
Sbjct: 221 DVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN----------------- 263
Query: 1083 FLLGVKVGLL---CTAPDPLDRPSMADIVFML 1111
L +V + C +P RPS A I+ +L
Sbjct: 264 --LNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 17/237 (7%)
Query: 828 TYVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDENT--FRK 881
++ +EA+R E ++ G G + + Q + ++I+ L+ G + F
Sbjct: 41 SFTREIEASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 882 EAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH 941
EA +G+ H N+ L G + ++V +YM NG+L T L+ DG + +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVT-RGRLAMIVTEYMENGSLDTFLRT---HDG---QFTIMQ 152
Query: 942 LISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
L+ + G+ G+ +L L VH D+ +NVL D++ +S+FGL R+ P A ++T
Sbjct: 153 LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + +PEA + + +DV+SFG+V+ E+L G +P + D++ V++
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE 269
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/247 (25%), Positives = 123/247 (49%), Gaps = 27/247 (10%)
Query: 828 TYVETLEATRQFDEE---------NVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTI 874
TY + A QF +E V+ G +G + K + + ++I+ L+ G
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 875 DEN--TFRKEAEALGKVKHRNLTVLRGYYA-GPPDVRLLVYDYMPNGNLATLLQEASHQD 931
++ F EA +G+ H N+ L G G P ++V ++M NG L L++ D
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKP--VMIVIEFMENGALDAFLRK---HD 139
Query: 932 GHVLNWPMRHLISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989
G + + L+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R+
Sbjct: 140 GQ---FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE 196
Query: 990 ATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDED 1048
P ++T + + +PEA + T +DV+S+GIV+ E+++ G +P ++D
Sbjct: 197 DDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 256
Query: 1049 IVKWVKK 1055
++K +++
Sbjct: 257 VIKAIEE 263
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 17/237 (7%)
Query: 828 TYVETLEATRQFDEENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDENT--FRK 881
++ +EA+R E ++ G G + + Q + ++I+ L+ G + F
Sbjct: 41 SFTREIEASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 882 EAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH 941
EA +G+ H N+ L G + ++V +YM NG+L T L+ DG + +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVT-RGRLAMIVTEYMENGSLDTFLRT---HDG---QFTIMQ 152
Query: 942 LISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
L+ + G+ G+ +L L VH D+ +NVL D++ +S+FGL R+ P A ++T
Sbjct: 153 LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ + +PEA + + +DV+SFG+V+ E+L G +P + D++ V++
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE 269
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 119
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 174
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 121/249 (48%), Gaps = 35/249 (14%)
Query: 834 EATRQFDEE---------NVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--T 878
EA R+F +E V+ G +G + KA + ++I+ L+ G +
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 879 FRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWP 938
F EA +G+ +H N+ L G V +L ++M NG L + L+ DG +
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILT-EFMENGALDSFLR---LNDGQ---FT 116
Query: 939 MRHLISL--GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
+ L+ + G+A G+ +L + VH D+ +N+L +++ +S+FGL R E S
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL----EENS 172
Query: 997 SSTTPIGSLG------YVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
S T SLG + +PEA + + T +D +S+GIV+ E+++ G +P ++D+
Sbjct: 173 SDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 232
Query: 1050 VKWVKKQLQ 1058
+ +++ +
Sbjct: 233 INAIEQDYR 241
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 122
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 177
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By A
Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine Aurora
Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D + L A
Sbjct: 70 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 123
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 178
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 224
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 82 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARL-----IEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 227
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea Inhibitor
Length = 267
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 65 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 118
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 173
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 81 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARL-----IEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 226
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 83 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARL-----IEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 228
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 71 RHPNILRLYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 124
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 179
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 71 RHPNILRLYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 124
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 179
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 122
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 177
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
PE ++ D++S G++ E L G+ P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With [7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRN 893
FD L +G++G ++ A Q +L+++ L ++ E+ R+E E ++H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
+ L GY+ V L++ +Y P G + LQ+ S D + L A LS+
Sbjct: 74 ILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSRFDEQRTATYITEL-----ANALSY 127
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
HS ++H DIKP+N+L ++ E +++FG + A +S TT G+L Y+ PE
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGW-----SVHAPSSRRTTLCGTLDYLPPEMI 182
Query: 1014 STGQPTKEADVYSFGIVLLEILTGRKP 1040
++ D++S G++ E L G P
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 92 RHPNILRLYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 145
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 200
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 16/216 (7%)
Query: 845 LSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRG 899
L +G++G ++ A Q +L+++ L ++ E+ R+E E ++H N+ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 900 YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDM 959
Y+ V L+ +Y P G + LQ+ S D LA LS+ HS +
Sbjct: 93 YFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCHSKRV 146
Query: 960 VHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPT 1019
+H DIKP+N+L + E +++FG + A +S TT G+L Y+ PE
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 201
Query: 1020 KEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
++ D++S G++ E L G+ P ++ K + +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 237
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 90 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARL-----IEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 235
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In
Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G+ G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 81 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
D++ N+L +++FGL RL AE ++ + + +PEA + G T ++
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARL--IEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 1023 DVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 226
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 63 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 116
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTTLCGTLDYLP 171
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 217
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 76 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 221
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In
Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 81 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARL-----IEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 226
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 86 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 231
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 89 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARL-----IEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 234
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 81 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 226
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 68 RHPNILRLYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 121
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E ++ FG + A +S TT G+L Y+
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW-----SVHAPSSRRTTLCGTLDYLP 176
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 87 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 232
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
Length = 285
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 87 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARL-----IEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 232
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor
Length = 272
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 122
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E ++ FG + A +S TT G+L Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW-----SVHAPSSRRTTLCGTLDYLP 177
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 91 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
D++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARL-----IEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 236
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 67 RHPNILRLYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 120
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S TT G+L Y+
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SCHAPSSRRTTLSGTLDYLP 175
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 18/211 (8%)
Query: 838 QFDEENVLSRGRYGLIF---KASYQDGMVL-SIRRLRDGTI---DENTFRKEAEALGKVK 890
QF+ VL +G +G +F K S D L +++ L+ T+ D + E + L +V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 891 HRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
H + L +YA + +L L+ D++ G+L T L + + + +L L LA
Sbjct: 85 HPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF---YLAELALA- 138
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
L LHSL +++ D+KP+N+L D + L++FGL + +I +A S G++ Y++
Sbjct: 139 -LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC---GTVEYMA 194
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
PE + T+ AD +SFG+++ E+LTG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 115/232 (49%), Gaps = 26/232 (11%)
Query: 842 ENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLT 895
E V+ G +G + KA + ++I+ L+ G + F EA +G+ +H N+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSF 953
L G V +L ++M NG L + L+ DG + + L+ + G+A G+ +
Sbjct: 79 RLEGVVTNSMPVMILT-EFMENGALDSFLR---LNDGQ---FTVIQLVGMLRGIASGMRY 131
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG------Y 1007
L + VH D+ +N+L +++ +S+FGL R E SS T SLG +
Sbjct: 132 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL----EENSSDPTYTSSLGGKIPIRW 187
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQ 1058
+PEA + + T +D +S+GIV+ E+++ G +P ++D++ +++ +
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR 239
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 119
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S T G+L Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTELCGTLDYLP 174
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYYAGP 904
G +G + +A + G ++++ L + N F +E + +++H N+ + G P
Sbjct: 48 GSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD--MVHG 962
P++ + V +Y+ G+L LL ++ ++ L+ R ++ +A+G+++LH+ + +VH
Sbjct: 107 PNLSI-VTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNRNPPIVHR 163
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
D+K N+L D + + +FGL RL + S G+ +++PE +++
Sbjct: 164 DLKSPNLLVDKKYTVKVCDFGLSRLKASX---FLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 1023 DVYSFGIVLLEILTGRKP 1040
DVYSFG++L E+ T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 112/222 (50%), Gaps = 22/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y ++++ L+ G++ + F EA + +++H+ L L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHG 962
P ++ +YM NG+L L+ S + + L+ + +A G++F+ + +H
Sbjct: 77 PI--YIITEYMENGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPT 1019
+++ N+L +++FGL RL E + T G+ + + +PEA + G T
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLI-----EDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
++DV+SFGI+L EI+T GR P + +++ + L+RG
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----QNLERG 222
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 71 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 124
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S T G+L Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTDLCGTLDYLP 179
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 119
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S T G+L Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTXLCGTLDYLP 174
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 67 RHPNILRLYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 120
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S T G+L Y+
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRDTLCGTLDYLP 175
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 119
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S T G+L Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTDLCGTLDYLP 174
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis Of
A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 67 RHPNILRLYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 120
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S T G+L Y+
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTDLCGTLDYLP 175
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 119
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S T G+L Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTDLCGTLDYLP 174
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 115/231 (49%), Gaps = 23/231 (9%)
Query: 845 LSRGRYGLIFKAS------YQDGMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVL 897
L G +G +F A +D M+++++ L+D T+ F++EAE L ++H ++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLGL-------- 947
G G D ++V++YM +G+L L+ A D +L P + LGL
Sbjct: 83 YGV-CGDGDPLIMVFEYMKHGDLNKFLR-AHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 948 --ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
A G+ +L S VH D+ +N L A+ + +FG+ R +T T + +
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML-PI 199
Query: 1006 GYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
++ PE+ + T E+DV+SFG++L EI T G++P + ++++ + +
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRN 893
FD L +G++G ++ A Q +L+++ L ++ E+ R+E E ++H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
+ L GY+ V L++ +Y P G + LQ+ S D + L A LS+
Sbjct: 74 ILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSRFDEQRTATYITEL-----ANALSY 127
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
HS ++H DIKP+N+L ++ E +++FG + A +S T G+L Y+ PE
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGW-----SVHAPSSRRDTLCGTLDYLPPEMI 182
Query: 1014 STGQPTKEADVYSFGIVLLEILTGRKP 1040
++ D++S G++ E L G P
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A Pentacyclic
Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 21/231 (9%)
Query: 835 ATRQFDEENV-----LSRGRYGLIFKASYQDG-MVLSIRRLRDGTID----ENTFRKEAE 884
A RQ+ E+ L +G++G ++ A ++ +L+++ L ++ E+ R+E E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 885 ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIS 944
++H N+ L GY+ V L++ +Y P G + LQ+ S D
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYI 114
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
LA LS+ HS ++H DIKP+N+L + E +++FG + A +S G+
Sbjct: 115 TELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRAALCGT 169
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
L Y+ PE ++ D++S G++ E L G+ P +D K + +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR 220
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 82 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTK 1020
+ +N L + +++FGL RL + T P G+ + + +PE+ + + +
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMT-----GDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 1021 EADVYSFGIVLLEILT-GRKP 1040
++DV++FG++L EI T G P
Sbjct: 193 KSDVWAFGVLLWEIATYGMSP 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 83 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS---LGYVSPEAASTGQPTK 1020
+ +N L + +++FGL RL + T P G+ + + +PE+ + + +
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMT-----GDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 1021 EADVYSFGIVLLEILT-GRKP 1040
++DV++FG++L EI T G P
Sbjct: 194 KSDVWAFGVLLWEIATYGMSP 214
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 71 RHPNILRLYGYFHDATRV-YLILEYAPRGEVYKELQKLSKFDEQRTA-----TYITELAN 124
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S G+L Y+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRXXLXGTLDYLP 179
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 106/199 (53%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P +++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 82 EPPFYIII-EFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIA-TPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL T + + PI + +PE+ + + + ++
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKS 194
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 195 DVWAFGVLLWEIATYGMSP 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 838 QFDEENVLSRGRYGLIF---KASYQDGMVL-SIRRLRDGTI---DENTFRKEAEALGKVK 890
QF+ VL +G +G +F K S D L +++ L+ T+ D + E + L +V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 891 HRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLL-QEASHQDGHVLNWPMRHLISLGLA 948
H + L +YA + +L L+ D++ G+L T L +E + V + L L LA
Sbjct: 85 HPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY----LAELALA 138
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L LHSL +++ D+KP+N+L D + L++FGL + +I +A S G++ Y+
Sbjct: 139 --LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC---GTVEYM 193
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+PE + T+ AD +SFG+++ E+LTG P
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With Flavonoid
Glycoside Quercitrin
Length = 305
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 838 QFDEENVLSRGRYGLIF---KASYQDGMVL-SIRRLRDGTI---DENTFRKEAEALGKVK 890
QF+ VL +G +G +F K S D L +++ L+ T+ D + E + L +V
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 891 HRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLL-QEASHQDGHVLNWPMRHLISLGLA 948
H + L +YA + +L L+ D++ G+L T L +E + V + L L LA
Sbjct: 86 HPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY----LAELALA 139
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L LHSL +++ D+KP+N+L D + L++FGL + +I +A S G++ Y+
Sbjct: 140 --LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC---GTVEYM 194
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+PE + T+ AD +SFG+++ E+LTG P
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its
Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 837 RQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTV 896
++ + E V+ RG +G++ KA ++ V +I+++ + + F E L +V H N+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIESES-ERKAFIVELRQLSRVNHPNIVK 65
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEAS----HQDGHVLNWPMRHLISLGLARGLS 952
L G P LV +Y G+L +L A + H ++W L ++G++
Sbjct: 66 LYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVA 116
Query: 953 FLHSLD---MVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSS-TTPIGSLGY 1007
+LHS+ ++H D+KP N+L A + +FG T + + T GS +
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-------TACDIQTHMTNNKGSAAW 169
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
++PE +++ DV+S+GI+L E++T RKP
Sbjct: 170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole Inhibitor
Length = 268
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 21/231 (9%)
Query: 835 ATRQFDEENV-----LSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAE 884
A RQ+ E+ L +G++G ++ A Q +L+++ L ++ E+ R+E E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 885 ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIS 944
++H N+ L GY+ V L++ +Y P G + LQ+ S D
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYI 114
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
LA LS+ HS ++H DIKP+N+L + E +++FG + A +S G+
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRAALCGT 169
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
L Y+ PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D + L A
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTATYITEL-----AN 122
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S G+L Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRAALCGTLDYLP 177
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 837 RQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTV 896
++ + E V+ RG +G++ KA ++ V +I+++ + + F E L +V H N+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIESES-ERKAFIVELRQLSRVNHPNIVK 66
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEAS----HQDGHVLNWPMRHLISLGLARGLS 952
L G P LV +Y G+L +L A + H ++W L ++G++
Sbjct: 67 LYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVA 117
Query: 953 FLHSLD---MVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSS-TTPIGSLGY 1007
+LHS+ ++H D+KP N+L A + +FG T + + T GS +
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-------TACDIQTHMTNNKGSAAW 170
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
++PE +++ DV+S+GI+L E++T RKP
Sbjct: 171 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 203
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P +++ ++M GNL L+E + Q+ + + ++ ++ + +L + +H D
Sbjct: 79 EPPFYIII-EFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRD 134
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIA-TPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL T + + PI + +PE+ + + + ++
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKS 191
Query: 1023 DVYSFGIVLLEILT 1036
DV++FG++L EI T
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.8 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 105/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P +++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 86 EPPFYIII-EFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 198
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 68 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 121
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S G+L Y+
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRXXLCGTLDYLP 176
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y + ++++ L+ GT+ F +EA + ++H L L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
+ ++ +YM G+L L+ S + G VL P S +A G++++ + +H D+
Sbjct: 81 EPI-YIITEYMAKGSLLDFLK--SDEGGKVL-LPKLIDFSAQIAEGMAYIERKNYIHRDL 136
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADV 1024
+ NVL +++FGL R + E ++ + + +PEA + G T ++DV
Sbjct: 137 RAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 1025 YSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+SFGI+L EI+T G+ P + D++
Sbjct: 195 WSFGILLYEIVTYGKIPYPGRTNADVM 221
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 66 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 119
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S G+L Y+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRXXLCGTLDYLP 174
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 105/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 86 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIA-TPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL T + + PI + +PE+ + + + ++
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKS 198
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 122
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S G+L Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRXXLCGTLDYLP 177
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
PE ++ D++S G++ E L G+ P
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic
Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L++ +Y P G + LQ+ S D LA
Sbjct: 69 RHPNILRLYGYFHDATRVYLIL-EYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 122
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S G+L Y+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRDDLCGTLDYLP 177
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + I ++ D T ++ FR E L K +H N+
Sbjct: 47 GSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI------------ 94
Query: 907 VRLLVYDYMPNGNLATLLQ--EASHQDGHV----LNWPMRHLISLG--LARGLSFLHSLD 958
LL YM NLA + Q E S H+ + M LI + A+G+ +LH+ +
Sbjct: 95 --LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN 152
Query: 959 MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA--ASTG 1016
++H D+K N+ + +FGL + + + + P GS+ +++PE
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVK-SRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 1017 QP-TKEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
P + ++DVYS+GIVL E++TG P + D +
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 117/232 (50%), Gaps = 26/232 (11%)
Query: 842 ENVLSRGRYGLI----FKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLT 895
E V+ G +G + K + + ++I+ L+ G ++ F EA +G+ H N+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSF 953
L G V +++ ++M NG+L + L++ Q + + L+ + G+A G+ +
Sbjct: 72 HLEGVVTKSTPV-MIITEFMENGSLDSFLRQNDGQ------FTVIQLVGMLRGIAAGMKY 124
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG------Y 1007
L ++ VH + +N+L +++ +S+FGL R + +S T +LG +
Sbjct: 125 LADMNYVHRALAARNILVNSNLVCKVSDFGLSRFL----EDDTSDPTYTSALGGKIPIRW 180
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQ 1058
+PEA + T +DV+S+GIV+ E+++ G +P ++D++ +++ +
Sbjct: 181 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR 232
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 86 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 198
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 94 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 149
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 206
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 207 DVWAFGVLLWEIATYGMSP 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 86 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 198
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 81 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 193
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 85 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 140
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 197
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 198 DVWAFGVLLWEIATYGMSP 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 81 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 193
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 83 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 195
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 196 DVWAFGVLLWEIATYGMSP 214
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.6 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H D
Sbjct: 83 EPPF-YIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 195
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 196 DVWAFGVLLWEIATYGMSP 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 16/226 (7%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKV 889
A F+ L +G++G ++ A Q +L+++ L ++ E+ R+E E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+H N+ L GY+ V L+ +Y P G + LQ+ S D LA
Sbjct: 92 RHPNILRLYGYFHDATRV-YLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELAN 145
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
LS+ HS ++H DIKP+N+L + E +++FG + A +S G+L Y+
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRDDLCGTLDYLP 200
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE ++ D++S G++ E L G+ P ++ K + +
Sbjct: 201 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 20/212 (9%)
Query: 838 QFDEENVLSRGRYGLIF---KASYQD-GMVLSIRRLRDGTI---DENTFRKEAEALGKVK 890
F+ VL +G +G +F K + D G + +++ L+ T+ D + E + L V
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 891 HRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLL-QEASHQDGHVLNWPMRHLISLGLA 948
H V++ +YA + +L L+ D++ G+L T L +E + V + LA
Sbjct: 89 HP--FVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE------LA 140
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
GL LHSL +++ D+KP+N+L D + L++FGL + AI +A S G++ Y+
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC---GTVEYM 197
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+PE + + AD +S+G+++ E+LTG P
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,6-Difluorophenyl)-1h-1,
2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG ++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P +V +YMP GNL L+E + ++ + + ++ ++ + +L + +H D
Sbjct: 100 EPPF-YIVTEYMPYGNLLDYLRECNREE---VTAVVLLYMATQISSAMEYLEKKNFIHRD 155
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + ++
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNTFSIKS 212
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 213 DVWAFGVLLWEIATYGMSP 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 106/205 (51%), Gaps = 8/205 (3%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907
G++GL+ + + ++I+ +R+G + E F +EAE + K+ H L L G +
Sbjct: 18 GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 77
Query: 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
LV+++M +G L+ L+ Q G + + L + G+++L ++H D+ +
Sbjct: 78 -CLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEASVIHRDLAAR 132
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
N L + +S+FG+ R + + +SST + + SPE S + + ++DV+SF
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVK 1051
G+++ E+ + G+ P + ++V+
Sbjct: 191 GVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P +++ ++M GNL L+E + Q+ + + ++ ++ + +L + +H D
Sbjct: 81 EPPFYIII-EFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRD 136
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 193
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P +++ ++M GNL L+E + Q+ + + ++ ++ + +L + +H D
Sbjct: 81 EPPFYIII-EFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRD 136
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 193
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 106/205 (51%), Gaps = 8/205 (3%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907
G++GL+ + + ++I+ +R+G + E F +EAE + K+ H L L G +
Sbjct: 21 GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 80
Query: 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
LV+++M +G L+ L+ Q G + + L + G+++L ++H D+ +
Sbjct: 81 -CLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 135
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
N L + +S+FG+ R + + +SST + + SPE S + + ++DV+SF
Sbjct: 136 NCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 193
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVK 1051
G+++ E+ + G+ P + ++V+
Sbjct: 194 GVLMWEVFSEGKIPYENRSNSEVVE 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 106/205 (51%), Gaps = 8/205 (3%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907
G++GL+ + + ++I+ +R+G + E F +EAE + K+ H L L G +
Sbjct: 18 GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 77
Query: 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
LV+++M +G L+ L+ Q G + + L + G+++L ++H D+ +
Sbjct: 78 -CLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 132
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
N L + +S+FG+ R + + +SST + + SPE S + + ++DV+SF
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVK 1051
G+++ E+ + G+ P + ++V+
Sbjct: 191 GVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 106/205 (51%), Gaps = 8/205 (3%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907
G++GL+ + + ++I+ +R+G + E F +EAE + K+ H L L G +
Sbjct: 16 GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 75
Query: 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
LV+++M +G L+ L+ Q G + + L + G+++L ++H D+ +
Sbjct: 76 -CLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 130
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
N L + +S+FG+ R + + +SST + + SPE S + + ++DV+SF
Sbjct: 131 NCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVK 1051
G+++ E+ + G+ P + ++V+
Sbjct: 189 GVLMWEVFSEGKIPYENRSNSEVVE 213
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVL 897
F E ++ G +G +FKA ++ DG IRR++ + +E +AL K+ H N+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK---YNNEKAEREVKALAKLDHVNIVHY 70
Query: 898 RGYYAG------PPDVRLLVYDYMPNG-------------------NLATLLQEASHQDG 932
G + G D L DY P + TL Q + G
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 933 HVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
L+ + + + +G+ ++HS ++H D+KP N+ + + +FGL + +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGL----VTSL 186
Query: 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEIL 1035
T G+L Y+SPE S+ KE D+Y+ G++L E+L
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H +
Sbjct: 285 EPPFYIIT-EFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRN 340
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 397
Query: 1023 DVYSFGIVLLEILT 1036
DV++FG++L EI T
Sbjct: 398 DVWAFGVLLWEIAT 411
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907
G++GL+ + + ++I+ +++G++ E+ F +EAE + K+ H L L G +
Sbjct: 38 GQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 97
Query: 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
LV+++M +G L+ L+ Q G + + L + G+++L ++H D+ +
Sbjct: 98 -CLVFEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 152
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
N L + +S+FG+ R + + +SST + + SPE S + + ++DV+SF
Sbjct: 153 NCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 210
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVK 1051
G+++ E+ + G+ P + ++V+
Sbjct: 211 GVLMWEVFSEGKIPYENRSNSEVVE 235
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ + + ++ ++ + +L + +H D
Sbjct: 81 EPPF-YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRD 136
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 193
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ + + ++ ++ + +L + +H D
Sbjct: 81 EPPF-YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRD 136
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 193
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ + + ++ ++ + +L + +H D
Sbjct: 86 EPPF-YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRD 141
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 198
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 89
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 143
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIG-SLG 1006
A+G+ FL S VH D+ +N + D F +++FGL R + ++ + T +
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ + + ++ ++ + +L + +H D
Sbjct: 79 EPPF-YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRD 134
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI---KWTAPESLAYNKFSIKS 191
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 192 DVWAFGVLLWEIATYGMSP 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ +N + ++ ++ + +L + +H +
Sbjct: 327 EPPFYIIT-EFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKNFIHRN 382
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 439
Query: 1023 DVYSFGIVLLEILT 1036
DV++FG++L EI T
Sbjct: 440 DVWAFGVLLWEIAT 453
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G ++ Y + ++++ L+ GT+ F +EA + ++H L L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
+ ++ ++M G+L L+ S + G VL P S +A G++++ + +H D+
Sbjct: 80 EPI-YIITEFMAKGSLLDFLK--SDEGGKVL-LPKLIDFSAQIAEGMAYIERKNYIHRDL 135
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADV 1024
+ NVL +++FGL R + E ++ + + +PEA + G T +++V
Sbjct: 136 RAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 1025 YSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+SFGI+L EI+T G+ P + D++
Sbjct: 194 WSFGILLYEIVTYGKIPYPGRTNADVM 220
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 140
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 141 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 195
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl
Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 122
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 123 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 177
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 64
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L +
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQY----- 118
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ + +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 119 -TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 176
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 177 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQY----- 119
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ + +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 120 -TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 177
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 140
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 141 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 195
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 96
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 153
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 154 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 208
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 70
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 127
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 128 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 182
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 69
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L +
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQY----- 123
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ + +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 124 -TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 181
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 63
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 120
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 121 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 175
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 176 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 125
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 126 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 180
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G++G +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ + + ++ ++ + +L + +H D
Sbjct: 79 EPPF-YIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRD 134
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIA-TPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL T + + PI + +PE+ + + + ++
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI---KWTAPESLAYNKFSIKS 191
Query: 1023 DVYSFGIVLLEILT-GRKP 1040
DV++FG++L EI T G P
Sbjct: 192 DVWAFGVLLWEIATYGMSP 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 71
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 128
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 129 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 183
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 184 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 72
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 129
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 130 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 184
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 185 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 86
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 140
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIG-SLG 1006
A+G+ FL S VH D+ +N + D F +++FGL R ++ + T +
Sbjct: 141 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 52/210 (24%), Positives = 108/210 (51%), Gaps = 11/210 (5%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G++ ++ ++++ +++G++ E+ F +EA+ + K+ H L G +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964
+ +V +Y+ NG L L+ SH G L + + G++FL S +H D+
Sbjct: 76 YPI-YIVTEYISNGCLLNYLR--SHGKG--LEPSQLLEMCYDVCEGMAFLESHQFIHRDL 130
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEAD 1023
+N L D D +S+FG+ R + +S T P+ + +PE + + ++D
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV---KWSAPEVFHYFKYSSKSD 187
Query: 1024 VYSFGIVLLEILT-GRKPV-MFTQDEDIVK 1051
V++FGI++ E+ + G+ P ++T E ++K
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLK 217
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 89
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 143
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIG-SLG 1006
A+G+ FL S VH D+ +N + D F +++FGL R ++ + T +
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
L G+YG +++ ++ + ++++ L++ T++ F KEA + ++KH NL L G
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
P ++ ++M GNL L+E + Q+ + + ++ ++ + +L + +H +
Sbjct: 288 EPPFYIIT-EFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKNFIHRN 343
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT-PIGSLGYVSPEAASTGQPTKEA 1022
+ +N L + +++FGL RL A + PI + +PE+ + + + ++
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI---KWTAPESLAYNKFSIKS 400
Query: 1023 DVYSFGIVLLEILT 1036
DV++FG++L EI T
Sbjct: 401 DVWAFGVLLWEIAT 414
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepat
Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 88
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 142
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIG-SLG 1006
A+G+ FL S VH D+ +N + D F +++FGL R ++ + T +
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 38 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 93
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 147
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIG-SLG 1006
A+G+ FL S VH D+ +N + D F +++FGL R ++ + T +
Sbjct: 148 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 92 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 147
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 201
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIG-SLG 1006
A+G+ FL S VH D+ +N + D F +++FGL R ++ + T +
Sbjct: 202 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 105/205 (51%), Gaps = 8/205 (3%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907
G++GL+ + + ++I+ +R+G + E F +EAE + K+ H L L G +
Sbjct: 19 GQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 78
Query: 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
LV ++M +G L+ L+ Q G + + L + G+++L ++H D+ +
Sbjct: 79 -CLVTEFMEHGCLSDYLRT---QRGLFAAETLLGM-CLDVCEGMAYLEEACVIHRDLAAR 133
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
N L + +S+FG+ R + + +SST + + SPE S + + ++DV+SF
Sbjct: 134 NCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 191
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVK 1051
G+++ E+ + G+ P + ++V+
Sbjct: 192 GVLMWEVFSEGKIPYENRSNSEVVE 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ + + H+ L + +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQAHAERIDHIKLLQYTSQ-- 125
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 126 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 180
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 88
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 142
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIG-SLG 1006
A+G+ FL S VH D+ +N + D F +++FGL R ++ + T +
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 842 ENVLSRGRYGLIFKASY--QDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLTVL 897
E ++ G +G +++A + + V + R D I + R+EA+ +KH N+ L
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS- 956
RG P++ LV ++ G L +L ++NW ++ +ARG+++LH
Sbjct: 72 RGVCLKEPNL-CLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDE 124
Query: 957 --LDMVHGDIKPQNVLFDADFE--------AHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ ++H D+K N+L E +++FGL R ++ + G+
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYA 179
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++PE +K +DV+S+G++L E+LTG P
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor
Nvp-Bbt594
Length = 295
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 122
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 123 ----ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEFFKVKEPG 177
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 844 VLSRGRYGLIFKASYQD-GMVLSIRRL-RDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
VL +G +G K ++++ G V+ ++ L R + TF KE + + ++H N+ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 902 AGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
D RL + +Y+ G L +++ Q W R + +A G+++LHS++++
Sbjct: 77 YK--DKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA-----------SSSTTPIGSLGYVS 1009
H D+ N L + +++FGL RL + + T +G+ +++
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEIL 1035
PE + ++ DV+SFGIVL EI+
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase In
Complex With An Mk-2461 Analog
Length = 307
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 87
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 141
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLG 1006
A+G+ +L S VH D+ +N + D F +++FGL R + + T +
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +++P G+L LQ+ + H+ L +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EFLPYGSLREYLQKHKERIDHIKLLQY----- 122
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ + +G+ +L + +H D+ +N+L + + + +FGL ++ + E P
Sbjct: 123 -TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-LPQDKEXXKVKEPG 180
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
Length = 350
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVL 897
+ + V+ G +G++++A D G +++I+++ G +N +E + + K+ H N+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---RELQIMRKLDHCNIVRL 78
Query: 898 RGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLARG 950
R ++ + + VY DY+P AT+ + A H P+ + L L R
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP----ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYRA 190
Query: 1010 PEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
PE T DV+S G VL E+L G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 845 LSRGRYGLIFKASY------QDGMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVL 897
L G +G +F A QD ++++++ L+D + + F +EAE L ++H ++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVL----NWP-------MRHLISLG 946
G D ++V++YM +G+L L+ +H VL N P M H I+
Sbjct: 81 YGVCV-EGDPLIMVFEYMKHGDLNKFLR--AHGPDAVLMAEGNPPTELTQSQMLH-IAQQ 136
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+A G+ +L S VH D+ +N L + + +FG+ R +T T + +
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIR 195
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVK--KQLQR 1059
++ PE+ + T E+DV+S G+VL EI T G++P + ++++ + + LQR
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR 251
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYA 902
+ +G +G + Y+ G ++++ +++ + F EA + +++H NL L G
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962
+V +YM G+L L+ VL SL + + +L + VH
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGDCLLKFSLDVCEAMEYLEGNNFVHR 132
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL--GYVSPEAASTGQPTK 1020
D+ +NVL D A +S+FGL + A SST G L + +PEA +
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEA--------SSTQDTGKLPVKWTAPEALREAAFST 184
Query: 1021 EADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
++DV+SFGI+L EI + GR P +D+V V+K
Sbjct: 185 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYA 902
+ +G +G + Y+ G ++++ +++ + F EA + +++H NL L G
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962
+V +YM G+L L+ VL SL + + +L + VH
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGDCLLKFSLDVCEAMEYLEGNNFVHR 126
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL--GYVSPEAASTGQPTK 1020
D+ +NVL D A +S+FGL + A SST G L + +PEA + +
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEA--------SSTQDTGKLPVKWTAPEALREKKFST 178
Query: 1021 EADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
++DV+SFGI+L EI + GR P +D+V V+K
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 214
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYA 902
+ +G +G + Y+ G ++++ +++ + F EA + +++H NL L G
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962
+V +YM G+L L+ VL SL + + +L + VH
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGDCLLKFSLDVCEAMEYLEGNNFVHR 141
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL--GYVSPEAASTGQPTK 1020
D+ +NVL D A +S+FGL + A SST G L + +PEA + +
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEA--------SSTQDTGKLPVKWTAPEALREKKFST 193
Query: 1021 EADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
++DV+SFGI+L EI + GR P +D+V V+K
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 229
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 52 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 107
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 161
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS--- 1004
A+G+ +L S VH D+ +N + D F +++FGL R E S G+
Sbjct: 162 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLP 219
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 220 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
Length = 318
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 51 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 106
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 160
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLG 1006
A+G+ +L S VH D+ +N + D F +++FGL R + + T +
Sbjct: 161 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 88
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 142
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLG 1006
A+G+ +L S VH D+ +N + D F +++FGL R + + T +
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 113/215 (52%), Gaps = 24/215 (11%)
Query: 838 QFDEENV-----LSRGRYGLIFKASY---QD--GMVLSIRRLRDGTIDE-NTFRKEAEAL 886
QF+E ++ L +G +G + Y QD G V+++++L+ T + F +E E L
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 66
Query: 887 GKVKHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV--LNWPMRHL 942
++H N+ +G Y AG +++L++ +Y+P G+L LQ+ + H+ L + +
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKERIDHIKLLQYTSQ-- 123
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +G+ +L + +H ++ +N+L + + + +FGL ++ + E P
Sbjct: 124 ----ICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKV-LPQDKEYYKVKEPG 178
Query: 1003 GS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
S + + +PE+ + + + +DV+SFG+VL E+ T
Sbjct: 179 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 25 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 80
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 134
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLG 1006
A+G+ +L S VH D+ +N + D F +++FGL R + + T +
Sbjct: 135 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp
From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 31/224 (13%)
Query: 835 ATRQFDEENVLSRGRYGLIFKAS-YQDGMVLSIRRLRDGTIDENT--------FRKEAEA 885
A + + E + +G +GL+ K +D V++I+ L G + T F++E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 886 LGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL 945
+ + H N+ L G PP +V +++P G+L L + +H + W ++ + L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLML 129
Query: 946 GLARGLSFLHSLD--MVHGDIKPQNVLF-----DADFEAHLSEFGLDRLAIATPAEASSS 998
+A G+ ++ + + +VH D++ N+ +A A +++FGL + ++ S
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV------HSV 183
Query: 999 TTPIGSLGYVSPE--AASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +G+ +++PE A T++AD YSF ++L ILTG P
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal
Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYA 902
+ +G +G + Y+ G ++++ +++ + F EA + +++H NL L G
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962
+V +YM G+L L+ VL SL + + +L + VH
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRS---VLGGDCLLKFSLDVCEAMEYLEGNNFVHR 313
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL--GYVSPEAASTGQPTK 1020
D+ +NVL D A +S+FGL + A SST G L + +PEA + +
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTKEA--------SSTQDTGKLPVKWTAPEALREKKFST 365
Query: 1021 EADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
++DV+SFGI+L EI + GR P +D+V V+K
Sbjct: 366 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK 401
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 88
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 142
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLG 1006
A+G+ +L S VH D+ +N + D F +++FGL R + + T +
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor
13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 87
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 141
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLG 1006
A+G+ +L S VH D+ +N + D F +++FGL R + + T +
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of Activation
For Tec Family Kinases
Length = 283
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G++ ++ ++I+ +++G++ E+ F +EA+ + + H L L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHG 962
+ ++ +YM NG L L+E H+ + + L+ + + + +L S +H
Sbjct: 92 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
D+ +N L + +S+FGL R + E +SS + + PE + + ++
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDD--EETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 1023 DVYSFGIVLLEILT-GRKPV-MFTQDE 1047
D+++FG+++ EI + G+ P FT E
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of
C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain Of
C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
(6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 85
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 139
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLG 1006
A+G+ +L S VH D+ +N + D F +++FGL R + + T +
Sbjct: 140 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1
Length = 302
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 86
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 140
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLG 1006
A+G+ +L S VH D+ +N + D F +++FGL R + + T +
Sbjct: 141 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 17/217 (7%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
++ + + G YG+++KA G +++++R+R DE +T +E L ++ H N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASH--QDGHVLNWPMRHLISLGLARGLS 952
L LV+++M +L +L E QD + + L RG++
Sbjct: 82 VSLIDVIHSE-RCLTLVFEFM-EKDLKKVLDENKTGLQDSQI------KIYLYQLLRGVA 133
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
H ++H D+KPQN+L ++D L++FGL R A P S T + +L Y +P+
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVR--SYTHEVVTLWYRAPDV 190
Query: 1013 -ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ + + D++S G + E++TG+ D+D
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 17/217 (7%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
++ + + G YG+++KA G +++++R+R DE +T +E L ++ H N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASH--QDGHVLNWPMRHLISLGLARGLS 952
L LV+++M +L +L E QD + + L RG++
Sbjct: 82 VSLIDVIHSE-RCLTLVFEFM-EKDLKKVLDENKTGLQDSQI------KIYLYQLLRGVA 133
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
H ++H D+KPQN+L ++D L++FGL R A P S T + +L Y +P+
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVR--SYTHEVVTLWYRAPDV 190
Query: 1013 -ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ + + D++S G + E++TG+ D+D
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G++ ++ ++I+ +++G++ E+ F +EA+ + + H L L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHG 962
+ ++ +YM NG L L+E H+ + + L+ + + + +L S +H
Sbjct: 92 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
D+ +N L + +S+FGL R + E +SS + + PE + + ++
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 1023 DVYSFGIVLLEILT-GRKPV-MFTQDE 1047
D+++FG+++ EI + G+ P FT E
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G++ ++ ++I+ +++G++ E+ F +EA+ + + H L L G
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHG 962
+ ++ +YM NG L L+E H+ + + L+ + + + +L S +H
Sbjct: 76 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 128
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
D+ +N L + +S+FGL R + E +SS + + PE + + ++
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 1023 DVYSFGIVLLEILT-GRKPV-MFTQDE 1047
D+++FG+++ EI + G+ P FT E
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-4-
Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-8-
Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G++ ++ ++I+ +++G++ E+ F +EA+ + + H L L G
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHG 962
+ ++ +YM NG L L+E H+ + + L+ + + + +L S +H
Sbjct: 83 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 135
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
D+ +N L + +S+FGL R + E +SS + + PE + + ++
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 1023 DVYSFGIVLLEILT-GRKPV-MFTQDE 1047
D+++FG+++ EI + G+ P FT E
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G++ ++ ++I+ +++G++ E+ F +EA+ + + H L L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHG 962
+ ++ +YM NG L L+E H+ + + L+ + + + +L S +H
Sbjct: 77 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
D+ +N L + +S+FGL R + E +SS + + PE + + ++
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 1023 DVYSFGIVLLEILT-GRKPV-MFTQDE 1047
D+++FG+++ EI + G+ P FT E
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDG-------MVLSIRRLRD-GTIDENTFRKEAEALGKV 889
F+E V+ RG +G ++ + D V S+ R+ D G + + F E +
Sbjct: 28 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ--FLTEGIIMKDF 83
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL-- 947
H N+ L G L+V YM +G+L ++ +H N ++ LI GL
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH------NPTVKDLIGFGLQV 137
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS--- 1004
A+G+ +L S VH D+ +N + D F +++FGL R E S G+
Sbjct: 138 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLP 195
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +++ E+ T + T ++DV+SFG++L E++T P
Sbjct: 196 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G++ ++ ++I+ +++G++ E+ F +EA+ + + H L L G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHG 962
+ ++ +YM NG L L+E H+ + + L+ + + + +L S +H
Sbjct: 72 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 124
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
D+ +N L + +S+FGL R + E +SS + + PE + + ++
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 1023 DVYSFGIVLLEILT-GRKPV-MFTQDE 1047
D+++FG+++ EI + G+ P FT E
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
L G++G++ ++ ++I+ +++G++ E+ F +EA+ + + H L L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDMVHG 962
+ ++ +YM NG L L+E H+ + + L+ + + + +L S +H
Sbjct: 77 RPI-FIITEYMANGCLLNYLREMRHR------FQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEA 1022
D+ +N L + +S+FGL R + E +SS + + PE + + ++
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 1023 DVYSFGIVLLEILT-GRKPV-MFTQDE 1047
D+++FG+++ EI + G+ P FT E
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVL 897
+ + V+ G +G++++A D G +++I+++ G +N +E + + K+ H N+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---RELQIMRKLDHCNIVRL 78
Query: 898 RGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLARG 950
R ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRA 190
Query: 1010 PEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
PE T DV+S G VL E+L G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVL 897
+ + V+ G +G++++A D G +++I+++ G +N +E + + K+ H N+ L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---RELQIMRKLDHCNIVRL 78
Query: 898 RGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLARG 950
R ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRA 190
Query: 1010 PEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
PE T DV+S G VL E+L G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With
A Staurosporine Analogue
Length = 290
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-----DGMVLSIRRLR-DGTIDENTFRKEAEA 885
T+ R + L +G +G + Y G ++++++L+ G + F++E +
Sbjct: 2 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 886 LGKVKHRNLTVLRGYYAGP--PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLI 943
L + + RG GP P++RL V +Y+P+G L LQ + L+ L
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRL-VMEYLPSGCLRDFLQRHRAR----LDASRLLLY 116
Query: 944 SLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIG 1003
S + +G+ +L S VH D+ +N+L +++ +++FGL +L
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 1004 SLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ + +PE+ S ++++DV+SFG+VL E+ T
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 31/224 (13%)
Query: 835 ATRQFDEENVLSRGRYGLIFKAS-YQDGMVLSIRRLRDGTIDENT--------FRKEAEA 885
A + + E + +G +GL+ K +D V++I+ L G + T F++E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 886 LGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL 945
+ + H N+ L G PP +V +++P G+L L + +H + W ++ + L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLML 129
Query: 946 GLARGLSFLHSLD--MVHGDIKPQNVLF-----DADFEAHLSEFGLDRLAIATPAEASSS 998
+A G+ ++ + + +VH D++ N+ +A A +++FG + ++ S
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV------HSV 183
Query: 999 TTPIGSLGYVSPE--AASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +G+ +++PE A T++AD YSF ++L ILTG P
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + +VY DY+P T+ + A H P+ + L L R
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 189
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032
Length = 289
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 35 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL 94
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHGDI 964
+V + +L L + + M+ LI + ARG+ +LH+ ++H D+
Sbjct: 95 A--IVTQWCEGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI----GSLGYVSPEA---ASTGQ 1017
K N+ D + +FGL AT S + GS+ +++PE +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGL-----ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 1018 PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
+ ++DVY+FGIVL E++TG+ P + D +
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 36/218 (16%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVL 897
F E ++ G +G +FKA ++ DG I+R++ + +E +AL K+ H N+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK---YNNEKAEREVKALAKLDHVNIVHY 69
Query: 898 RGYYAGPPDVRLLVYDYMPNG--------------------NLATLLQEASHQDGHVLNW 937
G + G +DY P + TL Q + G L+
Sbjct: 70 NGCWDG--------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 938 PMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997
+ + + +G+ ++HS +++ D+KP N+ + + +FGL + +
Sbjct: 122 VLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL----VTSLKNDGK 177
Query: 998 STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEIL 1035
G+L Y+SPE S+ KE D+Y+ G++L E+L
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
Length = 287
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 31/224 (13%)
Query: 835 ATRQFDEENVLSRGRYGLIFKAS-YQDGMVLSIRRLRDGTIDENT--------FRKEAEA 885
A + + E + +G +GL+ K +D V++I+ L G + T F++E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 886 LGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL 945
+ + H N+ L G PP +V +++P G+L L + +H + W ++ + L
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLML 129
Query: 946 GLARGLSFLHSLD--MVHGDIKPQNVLF-----DADFEAHLSEFGLDRLAIATPAEASSS 998
+A G+ ++ + + +VH D++ N+ +A A +++F L + ++ S
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV------HSV 183
Query: 999 TTPIGSLGYVSPE--AASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +G+ +++PE A T++AD YSF ++L ILTG P
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 35 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 94
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHGDI 964
+V + +L L + + M+ LI + ARG+ +LH+ ++H D+
Sbjct: 95 A--IVTQWCEGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI----GSLGYVSPEA---ASTGQ 1017
K N+ D + +FGL AT S + GS+ +++PE +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGL-----ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 1018 PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
+ ++DVY+FGIVL E++TG+ P + D +
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 22/215 (10%)
Query: 845 LSRGRYGLIFKAS------YQDGMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVL 897
L G +G +F A QD M+++++ L++ + F++EAE L ++H+++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 898 RGYYA-GPPDVRLLVYDYMPNGNLATLLQE--------ASHQDGHVLNWPMRHLISLG-- 946
G G P L+V++YM +G+L L+ A +D + L+++
Sbjct: 86 FGVCTEGRP--LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+A G+ +L L VH D+ +N L + +FG+ R +T T + +
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIR 202
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
++ PE+ + T E+DV+SFG+VL EI T G++P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 23 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 82
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHGDI 964
+V + +L L + + M+ LI + ARG+ +LH+ ++H D+
Sbjct: 83 A--IVTQWCEGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 134
Query: 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI-GSLGYVSPEA---ASTGQPTK 1020
K N+ D + +FGL + + S + GS+ +++PE + +
Sbjct: 135 KSNNIFLHEDNTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 1021 EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQI 222
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 201
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Inhibitor 7d
Length = 350
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 189
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 189
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 111
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 223
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 81
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 193
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta
In Complex With An Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 78
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 190
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide
Peptide
Length = 378
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 96
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 208
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 201
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 85
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYR 197
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRK--EAEALGKVKHRNLT 895
++ + L G +G + + +QD G ++I++ R +N R E + + K+ H N+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 896 VLRGYYAG-----PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARG 950
R G P D+ LL +Y G+L L + + G + P+R L+S ++
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG-LKEGPIRTLLS-DISSA 133
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSP 1010
L +LH ++H D+KP+N++ + + + +D + T +G+L Y++P
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKI-IDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 1011 EAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKW 1052
E + T D +SFG + E +TG +P F + V+W
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRP--FLPNWQPVQW 232
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122)
Length = 677
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRK--EAEALGKVKHRNLT 895
++ + L G +G + + +QD G ++I++ R +N R E + + K+ H N+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 896 VLRGYYAG-----PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARG 950
R G P D+ LL +Y G+L L + + G + P+R L+S ++
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG-LKEGPIRTLLS-DISSA 134
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSP 1010
L +LH ++H D+KP+N++ + + + +D + T +G+L Y++P
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKI-IDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 1011 EAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKW 1052
E + T D +SFG + E +TG +P F + V+W
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRP--FLPNWQPVQW 233
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQN 968
++ DY+ G L +LL+++ P+ + + L +LHS D+++ D+KP+N
Sbjct: 82 FMIMDYIEGGELFSLLRKSQRFPN-----PVAKFYAAEVCLALEYLHSKDIIYRDLKPEN 136
Query: 969 VLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFG 1028
+L D + +++FG + + G+ Y++PE ST K D +SFG
Sbjct: 137 ILLDKNGHIKITDFGFAKYV------PDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFG 190
Query: 1029 IVLLEILTGRKP 1040
I++ E+L G P
Sbjct: 191 ILIYEMLAGYTP 202
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4-
Arylmaleimide Inhibitor
Length = 391
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 82
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 194
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed
With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 105
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 217
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide
And Leucettine L4
Length = 350
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 189
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 90
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 202
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With Nms-869553a
Length = 422
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 113
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 225
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.4 bits (163), Expect = 5e-11, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 879 FRKEAEALGKVKHRNLTVLRGY-----YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH 933
FR+EA+ + H + + AGP + +V +Y+ L++ H +G
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGP--LPYIVMEYVD----GVTLRDIVHTEGP 129
Query: 934 VLNWPMRHLISLGLA-RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
+ P R + + A + L+F H ++H D+KP N++ A + +FG+ R AIA
Sbjct: 130 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADS 186
Query: 993 AEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ + T IG+ Y+SPE A +DVYS G VL E+LTG P FT D +
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 242
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen Synthase
Kinase-3 Inhibitors
Length = 424
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 115
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 227
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) With
Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 829 YVETLEATRQFDEENVLSRGRYG-LIFKASYQDGMVLSIRRL---RDGTIDENTFRKEAE 884
Y +++E + + + G +G I S +DG I+ + R + + R+E
Sbjct: 19 YFQSMEKYVRLQK---IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA 75
Query: 885 ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEAS---HQDGHVLNWPMRH 941
L +KH N+ R + + +V DY G+L + Q+ +L+W
Sbjct: 76 VLANMKHPNIVQYRESFEENGSL-YIVMDYCEGGDLFKRINAQKGVLFQEDQILDW---- 130
Query: 942 LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
+ + LA L +H ++H DIK QN+ D L +FG+ R+ +T A +
Sbjct: 131 FVQICLA--LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC--- 185
Query: 1002 IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
IG+ Y+SPE ++D+++ G VL E+ T
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I With
Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 111
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 223
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 879 FRKEAEALGKVKHRNLTVLRGY-----YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH 933
FR+EA+ + H + + AGP + +V +Y+ L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGP--LPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 934 VLNWPMRHLISLGLA-RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
+ P R + + A + L+F H ++H D+KP N++ A + +FG+ R AIA
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADS 169
Query: 993 AEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ + T IG+ Y+SPE A +DVYS G VL E+LTG P FT D +
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR-KEAEALGKVKHRNLTV 896
+ + V+ G +G++++A D G +++I+++ + + F+ +E + + K+ H N+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 156
Query: 897 LRGYYAGPPDVRLLVY-----DYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLAR 949
LR ++ + + VY DY+P T+ + A H P+ + L L R
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
L+++HS + H DIKPQN+L D D L +FG + + + + I S Y
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYR 268
Query: 1009 SPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
+PE T DV+S G VL E+L G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 22/215 (10%)
Query: 845 LSRGRYGLIFKASY------QDGMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVL 897
L G +G +F A QD M+++++ L++ + F++EAE L ++H+++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 898 RGYYA-GPPDVRLLVYDYMPNGNLATLLQE--------ASHQDGHVLNWPMRHLISLG-- 946
G G P L+V++YM +G+L L+ A +D + L+++
Sbjct: 80 FGVCTEGRP--LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+A G+ +L L VH D+ +N L + +FG+ R +T T + +
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIR 196
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
++ PE+ + T E+DV+SFG+VL EI T G++P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 22/215 (10%)
Query: 845 LSRGRYGLIFKASY------QDGMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVL 897
L G +G +F A QD M+++++ L++ + F++EAE L ++H+++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 898 RGYYA-GPPDVRLLVYDYMPNGNLATLLQE--------ASHQDGHVLNWPMRHLISLG-- 946
G G P L+V++YM +G+L L+ A +D + L+++
Sbjct: 109 FGVCTEGRP--LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+A G+ +L L VH D+ +N L + +FG+ R +T T + +
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIR 225
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
++ PE+ + T E+DV+SFG+VL EI T G++P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 26/222 (11%)
Query: 839 FDEENVLSRGRYGLIF---KASYQD-GMVLSIRRLRDGTI------DENTFRKEAEALGK 888
F+ VL G YG +F K S D G + +++ L+ TI E+T R E + L
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT-RTERQVLEH 114
Query: 889 VKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG- 946
++ V +YA + +L L+ DY+ G L T L + H + I +G
Sbjct: 115 IRQSPFLVTL-HYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQ------IYVGE 167
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ L LH L +++ DIK +N+L D++ L++FGL + +A E + G++
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC--GTIE 225
Query: 1007 YVSPEAASTGQP--TKEADVYSFGIVLLEILTGRKPVMFTQD 1046
Y++P+ G K D +S G+++ E+LTG P FT D
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP--FTVD 265
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 842 ENVLSRGRYGLIFKASY----QDGMVLSIRRLRDGTIDENT--FRKEAEALGKVKHRNLT 895
+ V+ +G +G+++ Y Q+ + +I+ L T + F +E + + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL--ARGLSF 953
L G P + ++ YM +G+L ++ N ++ LIS GL ARG+ +
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR------NPTVKDLISFGLQVARGMEY 139
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI----ATPAEASSSTTPIGSLGYVS 1009
L VH D+ +N + D F +++FGL R + + + + P+ + +
Sbjct: 140 LAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV---KWTA 196
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
E+ T + T ++DV+SFG++L E+LT P
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 879 FRKEAEALGKVKHRNLTVLRGY-----YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH 933
FR+EA+ + H + + AGP + +V +Y+ L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGP--LPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 934 VLNWPMRHLISLGLA-RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
+ P R + + A + L+F H ++H D+KP N++ A + +FG+ R AIA
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADS 169
Query: 993 AEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ + T IG+ Y+SPE A +DVYS G VL E+LTG P FT D +
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 225
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 876 ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEA---SHQDG 932
E++ E L K+KH N+ L Y P + LV + G L + E + +D
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHL-YLVMQLVSGGELFDRIVEKGFYTEKDA 122
Query: 933 HVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAI 989
L +R ++ + +LH + +VH D+KP+N+L+ D + + +S+FGL ++
Sbjct: 123 STL---IRQVLD-----AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-- 172
Query: 990 ATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ +T G+ GYV+PE + +K D +S G++ +L G P D +
Sbjct: 173 --EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKL 230
Query: 1050 VKWVKK 1055
+ + K
Sbjct: 231 FEQILK 236
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.6 bits (161), Expect = 8e-11, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 879 FRKEAEALGKVKHRNLTVLRGY-----YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH 933
FR+EA+ + H + + AGP + +V +Y+ L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGP--LPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 934 VLNWPMRHLISLGLA-RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
+ P R + + A + L+F H ++H D+KP N+L A + +FG+ R AIA
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIAR-AIADS 169
Query: 993 AEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ T IG+ Y+SPE A +DVYS G VL E+LTG P FT D +
Sbjct: 170 GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F++ + L G G++FK S++ ++ R+L I N +E + L + +
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G + ++ + + ++M G+L +L++A +L +S+ + +GL++L
Sbjct: 87 GFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLR 140
Query: 956 SL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I + A + +G+ Y+SPE
Sbjct: 141 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-----NSFVGTRSYMSPERLQ 195
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKPV 1041
+ ++D++S G+ L+E+ GR P+
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium
Tuberculosis Pknb
Length = 311
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 879 FRKEAEALGKVKHRNLTVLRGY-----YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH 933
FR+EA+ + H + + AGP + +V +Y+ L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGP--LPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 934 VLNWPMRHLISLGLA-RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
+ P R + + A + L+F H ++H D+KP N++ A + +FG+ R AIA
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADS 169
Query: 993 AEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ + T IG+ Y+SPE A +DVYS G VL E+LTG P FT D +
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPV 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 844 VLSRGRYGLIFKASYQ----DGMVLSIRRLR-DGTID-ENTFRKEAEALGKVKHRNLTVL 897
+L G +G +++ Y + + ++++ + D T+D + F EA + + H ++ L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
G P ++ + P G L L+ ++ + L L SL + + +++L S+
Sbjct: 91 IGIIEEEP--TWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+ VH DI +N+L + L +FGL R + +AS + PI ++SPE+ +
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI---KWMSPESINFR 201
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ F + + EIL+ G++P + +++D++
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F++ + L G G++FK S++ ++ R+L I N +E + L + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G + ++ + + ++M G+L +L++A +L +S+ + +GL++L
Sbjct: 68 GFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLR 121
Query: 956 SL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I S + + +G+ Y+SPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQ 176
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKPV 1041
+ ++D++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F++ + L G G++FK S++ ++ R+L I N +E + L + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G + ++ + + ++M G+L +L++A +L +S+ + +GL++L
Sbjct: 68 GFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLR 121
Query: 956 SL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I S + + +G+ Y+SPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQ 176
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKPV 1041
+ ++D++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
Length = 333
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F++ + L G G++FK S++ ++ R+L I N +E + L + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL- 954
G + ++ + + ++M G+L +L++A +L +S+ + +GL++L
Sbjct: 68 GFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLR 121
Query: 955 HSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I S + + +G+ Y+SPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQ 176
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKPV 1041
+ ++D++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP
DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 18/175 (10%)
Query: 879 FRKEAEALGKVKHRNLTVLRGY-----YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH 933
FR+EA+ + H + + AGP + +V +Y+ L++ H +G
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGP--LPYIVMEYVD----GVTLRDIVHTEGP 112
Query: 934 VLNWPMRHLISLGLA-RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
+ P R + + A + L+F H ++H D+KP N++ A + +FG+ R AIA
Sbjct: 113 MT--PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADS 169
Query: 993 AEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQD 1046
+ + T IG+ Y+SPE A +DVYS G VL E+LTG P FT D
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGD 222
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212 Interactions
Length = 341
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F++ + L G G++FK S++ ++ R+L I N +E + L + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G + ++ + + ++M G+L +L++A +L +S+ + +GL++L
Sbjct: 68 GFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLR 121
Query: 956 SL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I S + + +G+ Y+SPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQ 176
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKPV 1041
+ ++D++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-----DGMVLSIRRLR-DGTIDENTFRKEAEA 885
T+ R + L +G +G + Y G ++++++L+ G + F++E +
Sbjct: 5 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 886 LGKVKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIS 944
L + + RG GP L LV +Y+P+G L LQ + L+ L S
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYS 120
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+ +G+ +L S VH D+ +N+L +++ +++FGL +L
Sbjct: 121 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ + +PE+ S ++++DV+SFG+VL E+ T
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-----DGMVLSIRRLR-DGTIDENTFRKEAEA 885
T+ R + L +G +G + Y G ++++++L+ G + F++E +
Sbjct: 6 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 886 LGKVKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIS 944
L + + RG GP L LV +Y+P+G L LQ + L+ L S
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYS 121
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+ +G+ +L S VH D+ +N+L +++ +++FGL +L
Sbjct: 122 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ + +PE+ S ++++DV+SFG+VL E+ T
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-----DGMVLSIRRLR-DGTIDENTFRKEAEA 885
T+ R + L +G +G + Y G ++++++L+ G + F++E +
Sbjct: 18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 886 LGKVKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIS 944
L + + RG GP L LV +Y+P+G L LQ + L+ L S
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYS 133
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+ +G+ +L S VH D+ +N+L +++ +++FGL +L
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ + +PE+ S ++++DV+SFG+VL E+ T
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVK 890
+L F+E VL +G +G + KA D +I+++R +T E L +
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 891 HRNLTVLRGYYAGPPDVRLLV---------------YDYMPNGNLATLLQEASHQDGHVL 935
H+ V+R YYA + R V +Y NG L L+ +
Sbjct: 61 HQ--YVVR-YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 936 NWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG--------LDRL 987
W + I LS++HS ++H D+KP N+ D + +FG LD L
Sbjct: 118 YWRLFRQI----LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 988 AIAT---PAEASSSTTPIGSLGYVSPEAAS-TGQPTKEADVYSFGIVLLEIL 1035
+ + P + + T+ IG+ YV+ E TG ++ D+YS GI+ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex
With Ch4858061 And Mgatp
Length = 307
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F++ + L G G++FK S++ ++ R+L I N +E + L + +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G + ++ + + ++M G+L +L++A +L +S+ + +GL++L
Sbjct: 68 GFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLR 121
Query: 956 SL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I S + + +G+ Y+SPE
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQ 176
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKPV 1041
+ ++D++S G+ L+E+ GR P+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F++ + L G G++FK S++ ++ R+L I N +E + L + +
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G + ++ + + ++M G+L +L++A +L +S+ + +GL++L
Sbjct: 130 GFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLR 183
Query: 956 SL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I S + + +G+ Y+SPE
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQ 238
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKPV 1041
+ ++D++S G+ L+E+ GR P+
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 19 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL 78
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 79 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI----GSLGYVSPEAASTGQP 1018
D+K N+ D + +FGL AT S + GS+ +++PE
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGL-----ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 1019 TK---EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound
1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a And
Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F++ + L G G++FK S++ ++ R+L I N +E + L + +
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G + ++ + + ++M G+L +L++A +L +S+ + +GL++L
Sbjct: 95 GFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLR 148
Query: 956 SL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I S + + +G+ Y+SPE
Sbjct: 149 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMSPERLQ 203
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKPV 1041
+ ++D++S G+ L+E+ GR P+
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 19 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 78
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 79 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI----GSLGYVSPEAASTGQP 1018
D+K N+ D + +FGL AT S + GS+ +++PE
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGL-----ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 1019 TK---EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 39 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 98
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 99 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 148
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI----GSLGYVSPEAASTGQP 1018
D+K N+ D + +FGL AT S + GS+ +++PE
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGL-----ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 1019 TK---EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 839 FDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTV 896
F+ ++ G YG ++K + + G + +I+ + +E ++E L K HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 897 LRGYY--AGPP---DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
G + PP D LV ++ G++ L++ G+ L I + RGL
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGL 142
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG----LDRLAIATPAEASSSTTPIGSLGY 1007
S LH ++H DIK QNVL + E L +FG LDR T IG+ +
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-------VGRRNTFIGTPYW 195
Query: 1008 VSPEAASTGQPTK-----EADVYSFGIVLLEILTGRKPV 1041
++PE + + ++D++S GI +E+ G P+
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 25/209 (11%)
Query: 861 GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNG 918
G +++I+ + T+ D + E EAL ++H+++ L + +V +Y P G
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKI-FMVLEYCPGG 93
Query: 919 NLATLL---QEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
L + S ++ V+ R ++S ++++HS H D+KP+N+LFD
Sbjct: 94 ELFDYIISQDRLSEEETRVV---FRQIVS-----AVAYVHSQGYAHRDLKPENLLFDEYH 145
Query: 976 EAHLSEFGLDRLAIATPA--EASSSTTPIGSLGYVSPE-AASTGQPTKEADVYSFGIVLL 1032
+ L +FGL A P + T GSL Y +PE EADV+S GI+L
Sbjct: 146 KLKLIDFGL----CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLY 201
Query: 1033 EILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
++ G P D+D V + K++ RG+
Sbjct: 202 VLMCGFLPF----DDDNVMALYKKIMRGK 226
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene
Inhibitor
Length = 282
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 21 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 80
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 81 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 130
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI-GSLGYVSPEAASTGQPTK- 1020
D+K N+ D + +FGL + + S + GS+ +++PE
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 1021 --EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 47 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 106
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 107 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI----GSLGYVSPEAASTGQP 1018
D+K N+ D + +FGL AT S + GS+ +++PE
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGL-----ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 1019 TK---EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 24 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 83
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 84 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI-GSLGYVSPEAASTGQPTK- 1020
D+K N+ D + +FGL + + S + GS+ +++PE
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 1021 --EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With A
[1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 24 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 83
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 84 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI-GSLGYVSPEAASTGQPTK- 1020
D+K N+ D + +FGL + + S + GS+ +++PE
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 1021 --EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 19 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 78
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 79 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI-GSLGYVSPEAASTGQPTK- 1020
D+K N+ D + +FGL + + S + GS+ +++PE
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 1021 --EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 64 ------------VKLL--DVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 166
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 33/200 (16%)
Query: 865 SIRRLRDGTIDENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATL 923
++ LR+ T+ KE + L KV H N+ L+ Y LV+D M G L
Sbjct: 62 EVQELREATL------KEVDILRKVSGHPNIIQLKDTYETNT-FFFLVFDLMKKGELFDY 114
Query: 924 LQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG 983
L E MR L+ + A LH L++VH D+KP+N+L D D L++FG
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICA-----LHKLNIVHRDLKPENILLDDDMNIKLTDFG 169
Query: 984 LDRLAIATPAEASSSTTPIGSLGYVSPE----AASTGQP--TKEADVYSFGIVLLEILTG 1037
P E S G+ Y++PE + + P KE D++S G+++ +L G
Sbjct: 170 FS--CQLDPGEKLRSVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
Query: 1038 RKPVMFTQDEDIVKWVKKQL 1057
P W +KQ+
Sbjct: 226 SPPF----------WHRKQM 235
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 46 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 105
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 106 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 155
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI-GSLGYVSPEAASTGQPTK- 1020
D+K N+ D + +FGL + + S + GS+ +++PE
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 1021 --EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime Furopyridine
Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In Complex
With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDE-NTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906
G +G ++K + + + + + T + F+ E L K +H N+ + GY P
Sbjct: 47 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 106
Query: 907 VRLLVYDYMPNGNLATLLQEASHQDGHVL--NWPMRHLISLG--LARGLSFLHSLDMVHG 962
+V + +L L H++ + M LI + A+G+ +LH+ ++H
Sbjct: 107 A--IVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI-GSLGYVSPEAASTGQPTK- 1020
D+K N+ D + +FGL + + S + GS+ +++PE
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 1021 --EADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
++DVY+FGIVL E++TG+ P + D +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 14/228 (6%)
Query: 833 LEATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLR----DGTIDENTFRKEAEALG 887
+ ++ QF + L G Y ++K + G+ ++++ ++ +GT +T +E +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT--PSTAIREISLMK 58
Query: 888 KVKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG 946
++KH N ++R Y + +L LV+++M N + L +
Sbjct: 59 ELKHEN--IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L +GL+F H ++H D+KPQN+L + + L +FGL R A P SS + +L
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR-AFGIPVNTFSSE--VVTLW 173
Query: 1007 YVSPEAASTGQP-TKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWV 1053
Y +P+ + + D++S G +L E++TG+ T DE+ +K +
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GLSF HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 837 RQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDG----TIDENTFRKEAEALGKVKH 891
R+++ L +G YG+++K+ + G V++++++ D T + TFR+ H
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 892 RNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARG 950
N+ L D + LV+DYM A + ++L + + L +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIR-------ANILEPVHKQYVVYQLIKV 121
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-------------LAIATPAEASS 997
+ +LHS ++H D+KP N+L +A+ +++FGL R L+I E
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 998 STTPI-----GSLGYVSPEA-ASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
PI + Y +PE + + TK D++S G +L EIL G KP+
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPIF 231
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L Y G D +V +Y+ G+L ++ E +G + + + L FLHS
Sbjct: 83 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 134
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
++H DIK N+L D L++FG A TP E S +T +G+ +++PE +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGF--CAQITP-EQSKRSTMVGTPYWMAPEVVTRK 191
Query: 1017 QPTKEADVYSFGIVLLEILTGRKPVM 1042
+ D++S GI+ +E++ G P +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 33/249 (13%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFK------ASYQDGMVLSIRRLRD---GTIDENTFRKE 882
+L A R +E L R+G ++K A + ++I+ L+D G + E FR E
Sbjct: 24 SLSAVRFMEE---LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE-FRHE 79
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLAT-LLQEASHQD---------- 931
A +++H N+ L G + + ++ Y +G+L L+ + H D
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSM-IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 932 GHVLNWP-MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990
L P HL++ +A G+ +L S +VH D+ +NVL +S+ GL R A
Sbjct: 139 KSALEPPDFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 991 TPAEA--SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDE 1047
+S PI +++PEA G+ + ++D++S+G+VL E+ + G +P ++
Sbjct: 198 ADYYKLLGNSLLPI---RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 254
Query: 1048 DIVKWVKKQ 1056
D+V+ ++ +
Sbjct: 255 DVVEMIRNR 263
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 33/249 (13%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFK------ASYQDGMVLSIRRLRD---GTIDENTFRKE 882
+L A R +E L R+G ++K A + ++I+ L+D G + E FR E
Sbjct: 7 SLSAVRFMEE---LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE-FRHE 62
Query: 883 AEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLAT-LLQEASHQD---------- 931
A +++H N+ L G + + ++ Y +G+L L+ + H D
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSM-IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 932 GHVLNWP-MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990
L P HL++ +A G+ +L S +VH D+ +NVL +S+ GL R A
Sbjct: 122 KSALEPPDFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 991 TPAEA--SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDE 1047
+S PI +++PEA G+ + ++D++S+G+VL E+ + G +P ++
Sbjct: 181 ADYYKLLGNSLLPI---RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 237
Query: 1048 DIVKWVKKQ 1056
D+V+ ++ +
Sbjct: 238 DVVEMIRNR 246
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of 8-Anilino-1-Naphthalene
Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 33/230 (14%)
Query: 834 EATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKV 889
E F + + G YG+++KA + G V++++++R T E +T +E L ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMR 940
H N+ V+LL D + N L+ E HQD + P+
Sbjct: 67 NHPNI------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI 112
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T
Sbjct: 113 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTH 169
Query: 1001 PIGSLGYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ +L Y +PE + A D++S G + E++T R +F D +I
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 217
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE
KINASE Pknb
Length = 294
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
G+ H + +VH DIKPQN+L D++ + +FG+ + T ++ +G++ Y S
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV--LGTVQYFS 180
Query: 1010 PEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
PE A G+ T E D+YS GIVL E+L G P
Sbjct: 181 PEQAK-GEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition By
Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A Taxol-
Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRN 893
FD L +G++G ++ A Q+ +++++ L ++ E+ R+E E ++H N
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
+ + Y+ + L++ ++ P G L LQ+ D M L A L +
Sbjct: 76 ILRMYNYFHDRKRIYLML-EFAPRGELYKELQKHGRFDEQRSATFMEEL-----ADALHY 129
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
H ++H DIKP+N+L E +++FG + A + G+L Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGW-----SVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 1014 STGQPTKEADVYSFGIVLLEILTGRKP 1040
++ D++ G++ E L G P
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 844 VLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGK-VKHRNLTVL 897
V+ +G +G + A ++ + + +++ L+ I +E E L K VKH L L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
+ D V DY+ G L LQ P + +A L +LHSL
Sbjct: 105 HFSFQTA-DKLYFVLDYINGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSL 158
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ 1017
++V+ D+KP+N+L D+ L++FGL + I S+++T G+ Y++PE
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCKENI---EHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 1018 PTKEADVYSFGIVLLEILTGRKP 1040
+ D + G VL E+L G P
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRN 893
FD L +G++G ++ A Q+ +++++ L ++ E+ R+E E ++H N
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
+ + Y+ + L++ ++ P G L LQ+ D M L A L +
Sbjct: 77 ILRMYNYFHDRKRIYLML-EFAPRGELYKELQKHGRFDEQRSATFMEEL-----ADALHY 130
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
H ++H DIKP+N+L E +++FG + A + G+L Y+ PE
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGW-----SVHAPSLRRRXMCGTLDYLPPEMI 185
Query: 1014 STGQPTKEADVYSFGIVLLEILTGRKP 1040
++ D++ G++ E L G P
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 33/230 (14%)
Query: 834 EATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKV 889
E F + + G YG+++KA + G V++++++R T E +T +E L ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMR 940
H N+ V+LL D + N L+ E HQD + P+
Sbjct: 67 NHPNI------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI 112
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T
Sbjct: 113 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTH 169
Query: 1001 PIGSLGYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ +L Y +PE + A D++S G + E++T R +F D +I
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 217
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRN 893
FD L +G++G ++ A Q+ +++++ L ++ E+ R+E E ++H N
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
+ + Y+ + L++ ++ P G L LQ+ D M L A L +
Sbjct: 76 ILRMYNYFHDRKRIYLML-EFAPRGELYKELQKHGRFDEQRSATFMEEL-----ADALHY 129
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
H ++H DIKP+N+L E +++FG + A + G+L Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGW-----SVHAPSLRRRXMCGTLDYLPPEMI 184
Query: 1014 STGQPTKEADVYSFGIVLLEILTGRKP 1040
++ D++ G++ E L G P
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 33/200 (16%)
Query: 865 SIRRLRDGTIDENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATL 923
++ LR+ T+ KE + L KV H N+ L+ Y LV+D M G L
Sbjct: 49 EVQELREATL------KEVDILRKVSGHPNIIQLKDTYETNT-FFFLVFDLMKKGELFDY 101
Query: 924 LQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG 983
L E MR L+ + A LH L++VH D+KP+N+L D D L++FG
Sbjct: 102 LTEKVTLSEKETRKIMRALLEVICA-----LHKLNIVHRDLKPENILLDDDMNIKLTDFG 156
Query: 984 LDRLAIATPAEASSSTTPIGSLGYVSPE----AASTGQP--TKEADVYSFGIVLLEILTG 1037
P E G+ Y++PE + + P KE D++S G+++ +L G
Sbjct: 157 FS--CQLDPGEKLREVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
Query: 1038 RKPVMFTQDEDIVKWVKKQL 1057
P W +KQ+
Sbjct: 213 SPPF----------WHRKQM 222
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVK 890
+L F+E VL +G +G + KA D +I+++R +T E L +
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR- 949
H+ V+R YYA + R V +TL + + + L + + H +L R
Sbjct: 61 HQ--YVVR-YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL-YDLIHSENLNQQRD 116
Query: 950 -----------GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG--------LDRLAIA 990
LS++HS ++H D+KP N+ D + +FG LD L +
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 991 T---PAEASSSTTPIGSLGYVSPEAAS-TGQPTKEADVYSFGIVLLEIL 1035
+ P + + T+ IG+ YV+ E TG ++ D+YS GI+ E++
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 834 EATRQFDEENVLSRGRYGLIFKASYQDG--------MVLSIRRLRDGTIDE--NTFRKEA 883
E +++D ++V+ RG ++ + ++ M ++ RL ++E R+E
Sbjct: 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRET 150
Query: 884 EALGKVK-HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
L +V H ++ L Y LV+D M G L L E MR L
Sbjct: 151 HILRQVAGHPHIITLIDSYESS-SFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSL 209
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ +SFLH+ ++VH D+KP+N+L D + + LS+FG P E
Sbjct: 210 LE-----AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPGEKLRELC-- 260
Query: 1003 GSLGYVSPEAASTGQPT------KEADVYSFGIVLLEILTGRKP 1040
G+ GY++PE KE D+++ G++L +L G P
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 66 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 168
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 211
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 64 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 166
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 209
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efp
With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor Efq
With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With 3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With Cell
Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The Inhibitor
Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With 4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex
With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In Complex
With 4-[(6-amino-4-pyrimidinyl) Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2 (Cdk2)
In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-2-
Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2- Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A Pyrazolo[1,
5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With The
Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar Study,
Crystal Structure In Complex With Cdk2, Selectivity, And
Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide (At7519),
A Novel Cyclin Dependent Kinase Inhibitor Using Fragment-
Based X-Ray Crystallography And Structure Based Drug
Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl Pyrimidine,
Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea (At9283),
A Multi-Targeted Kinase Inhibitor With Potent Aurora
Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its
Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole Type
Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole Type
Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole Type
Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of 2-Anilino-4-(Thiazol-5-Yl)
Pyrimidine Transcriptional Cdk Inhibitors As Anticancer
Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 64 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 166
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 209
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 53/234 (22%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLR--DGTIDENTFRKEAEALGKVKHRNLT 895
F+ L RG +G++F+A + D +I+R+R + + +E +AL K++H
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG-- 64
Query: 896 VLRGYYA------------GPPDVRLLVY----------DYMPNGNLATLLQEAS---HQ 930
++R + A P V L + D+M NG +E S H
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM-NGRCTIEERERSVCLH- 122
Query: 931 DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGL------ 984
I L +A + FLHS ++H D+KP N+ F D + +FGL
Sbjct: 123 ------------IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 170
Query: 985 --DRLAIATPAEA-SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEIL 1035
+ + TP A + T +G+ Y+SPE + + D++S G++L E+L
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYA 902
V+ G +G++F+A + ++I+++ D+ +E + + VKH N+ L+ ++
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQ---DKRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 903 GPPDVRL-----LVYDYMPNGNLATLLQEASHQDGHVLNWPMR--HLISLGLARGLSFLH 955
D + LV +Y+P T+ + + H PM L L R L+++H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH 158
Query: 956 SLDMVHGDIKPQNVLFDADFEA-HLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA- 1013
S+ + H DIKPQN+L D L +FG ++ IA + + I S Y +PE
Sbjct: 159 SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA----GEPNVSXICSRYYRAPELIF 214
Query: 1014 STGQPTKEADVYSFGIVLLEILTGR 1038
T D++S G V+ E++ G+
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor
2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of 6-cyclohexylmethoxy-8-isopropyl-9h-
Purin-2-ylamine And Monomeric Cdk2
Length = 299
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLT 895
+D +VL G + +I + +++I+ + ++ E + E L K+KH N+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
L Y + L++ + G L + E G LI + + +LH
Sbjct: 80 ALDDIYESGGHLYLIM-QLVSGGELFDRIVE----KGFYTERDASRLI-FQVLDAVKYLH 133
Query: 956 SLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
L +VH D+KP+N+L+ D D + +S+FGL ++ S +T G+ GYV+PE
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME----DPGSVLSTACGTPGYVAPEV 189
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
+ +K D +S G++ +L G P D + + + K
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLT 895
+D +VL G + +I + +++I+ + ++ E + E L K+KH N+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
L Y + L++ + G L + E G LI + + +LH
Sbjct: 80 ALDDIYESGGHLYLIM-QLVSGGELFDRIVE----KGFYTERDASRLI-FQVLDAVKYLH 133
Query: 956 SLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
L +VH D+KP+N+L+ D D + +S+FGL ++ S +T G+ GYV+PE
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME----DPGSVLSTACGTPGYVAPEV 189
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
+ +K D +S G++ +L G P D + + + K
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLT 895
+D +VL G + +I + +++I+ + ++ E + E L K+KH N+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
L Y + L++ + G L + E G LI + + +LH
Sbjct: 80 ALDDIYESGGHLYLIM-QLVSGGELFDRIVE----KGFYTERDASRLI-FQVLDAVKYLH 133
Query: 956 SLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
L +VH D+KP+N+L+ D D + +S+FGL ++ S +T G+ GYV+PE
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME----DPGSVLSTACGTPGYVAPEV 189
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
+ +K D +S G++ +L G P D + + + K
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs
Length = 301
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F++ + L G G++FK S++ ++ R+L I N +E + L + +
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G + ++ + + ++M G+L +L++A +L +S+ + +GL++L
Sbjct: 71 GFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGK-----VSIAVIKGLTYLR 124
Query: 956 SL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I A +G+ Y+SPE
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF-----VGTRSYMSPERLQ 179
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKP 1040
+ ++D++S G+ L+E+ GR P
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 845 LSRGRYGLIFKASYQDG-MVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRG 899
L +G++G ++ A + +++++ L I+ E+ R+E E + H N+ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 900 YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDM 959
Y+ + L+ +Y P G L LQ++ D M L A L + H +
Sbjct: 91 YFYDRRRI-YLILEYAPRGELYKELQKSCTFDEQRTATIMEEL-----ADALMYCHGKKV 144
Query: 960 VHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPT 1019
+H DIKP+N+L E +++FG + A + T G+L Y+ PE
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGW-----SVHAPSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 1020 KEADVYSFGIVLLEILTGRKP 1040
++ D++ G++ E+L G P
Sbjct: 200 EKVDLWCIGVLCYELLVGNPP 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 33/200 (16%)
Query: 865 SIRRLRDGTIDENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATL 923
++ LR+ T+ KE + L KV H N+ L+ Y LV+D M G L
Sbjct: 62 EVQELREATL------KEVDILRKVSGHPNIIQLKDTYETNT-FFFLVFDLMKKGELFDY 114
Query: 924 LQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG 983
L E MR L+ + A LH L++VH D+KP+N+L D D L++FG
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICA-----LHKLNIVHRDLKPENILLDDDMNIKLTDFG 169
Query: 984 LDRLAIATPAEASSSTTPIGSLGYVSPE----AASTGQP--TKEADVYSFGIVLLEILTG 1037
P E G+ Y++PE + + P KE D++S G+++ +L G
Sbjct: 170 FS--CQLDPGEKLREVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
Query: 1038 RKPVMFTQDEDIVKWVKKQL 1057
P W +KQ+
Sbjct: 226 SPPF----------WHRKQM 235
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHRN 893
FD +L +G +G +I G +++ LR I DE E+ L +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 894 LTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ YA RL V +Y G L L V + L
Sbjct: 67 LTALK--YAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALE 119
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
+LHS D+V+ DIK +N++ D D +++FGL + I ++ ++ T G+ Y++PE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI---SDGATMKTFCGTPEYLAPEV 176
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase
Domain Of Focal Adhesion Kinase With A Phosphorylated
Activation Loop
Length = 276
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 17/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTV 896
+ G++G + + Y M ++I+ ++ T D F +EA + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L G P ++ + G L + LQ L+ L + L+ L++L S
Sbjct: 76 LIGVITENP--VWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLES 129
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAAST 1015
VH DI +NVL ++ L +FGL R + +T +AS PI +++PE+ +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI---KWMAPESINF 186
Query: 1016 GQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTV 896
+ G++G + + Y M ++I+ ++ T D F +EA + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L G P ++ + G L + LQ + L+ L + L+ L++L S
Sbjct: 76 LIGVITENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLES 129
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAAST 1015
VH DI +NVL ++ L +FGL R + +T +AS PI +++PE+ +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESINF 186
Query: 1016 GQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 69 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 171
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHRN 893
FD +L +G +G +I G +++ LR I DE E+ L +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 894 LTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ YA RL V +Y G L L V + L
Sbjct: 67 LTALK--YAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALE 119
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
+LHS D+V+ DIK +N++ D D +++FGL + I ++ ++ T G+ Y++PE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI---SDGATMKTFCGTPEYLAPEV 176
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHRN 893
FD +L +G +G +I G +++ LR I DE E+ L +H
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 894 LTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ YA RL V +Y G L L V + L
Sbjct: 70 LTALK--YAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALE 122
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
+LHS D+V+ DIK +N++ D D +++FGL + I ++ ++ T G+ Y++PE
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI---SDGATMKTFCGTPEYLAPEV 179
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L Y G D +V +Y+ G+L ++ E +G + + + L FLHS
Sbjct: 84 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 135
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
++H +IK N+L D L++FG A TP E S +T +G+ +++PE +
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGF--CAQITP-EQSKRSTMVGTPYWMAPEVVTRK 192
Query: 1017 QPTKEADVYSFGIVLLEILTGRKPVM 1042
+ D++S GI+ +E++ G P +
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYL 218
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 837 RQFDEENVLSRGRYGLIFKASYQDGM-VLSIRRLRDGTIDE---NTFRKEAEALGKVKHR 892
+++++ + G YG +FKA ++ +++++R+R DE ++ +E L ++KH+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 893 NLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQD--------GHVLNWPMRHLIS 944
N+ VRL +D + + TL+ E QD L+ +
Sbjct: 62 NI------------VRL--HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
L +GL F HS +++H D+KPQN+L + + E L++FGL R A P S+ + +
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCYSAE--VVT 164
Query: 1005 LGYVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
L Y P+ + + D++S G + E+ +P+ D D
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVD 209
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNW 937
FR+E + L + +T L +YA D L LV DY G+L TLL + + L
Sbjct: 121 FREERDVLVNGDSKWITTL--HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR----LPE 174
Query: 938 PMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997
M + + +H L VH DIKP N+L D + L++FG L + S
Sbjct: 175 EMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQS 233
Query: 998 STTPIGSLGYVSPE-----AASTGQPTKEADVYSFGIVLLEILTGRKP 1040
S +G+ Y+SPE G+ E D +S G+ + E+L G P
Sbjct: 234 SVA-VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In
With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVK-HRNLTVLRGYYAG 903
L G + + K ++ ++ ++ NT +KE AL + H N+ L +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT-QKEITALKLCEGHPNIVKLHEVFHD 77
Query: 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGD 963
LV + + G L +++ H ++ MR L+S +S +H + +VH D
Sbjct: 78 QLHT-FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHDVGVVHRD 131
Query: 964 IKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTK 1020
+KP+N+LF + + E + +FG RL P + TP +L Y +PE + +
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARLK---PPDNQPLKTPCFTLHYAAPELLNQNGYDE 188
Query: 1021 EADVYSFGIVLLEILTGRKP-------VMFTQDEDIVKWVKK 1055
D++S G++L +L+G+ P + T +I+K +KK
Sbjct: 189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK 230
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 15/216 (6%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL 954
L + LV++++ + +L T + +AS G + P+ L +GL+F
Sbjct: 68 VKLLDVIHTENKL-YLVFEFL-HQDLKTFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 955 HSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
HS ++H D+KPQN+L + + L++FGL R A P + +L Y +PE
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTLWYRAPEILL 179
Query: 1015 TGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ A D++S G + E++T R +F D +I
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L Y G D +V +Y+ G+L ++ E +G + + + L FLHS
Sbjct: 83 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 134
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
++H DIK N+L D L++FG A TP E S + +G+ +++PE +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGF--CAQITP-EQSKRSXMVGTPYWMAPEVVTRK 191
Query: 1017 QPTKEADVYSFGIVLLEILTGRKPVM 1042
+ D++S GI+ +E++ G P +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L Y G D +V +Y+ G+L ++ E +G + + + L FLHS
Sbjct: 84 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 135
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
++H DIK N+L D L++FG A TP E S + +G+ +++PE +
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGF--CAQITP-EQSKRSXMVGTPYWMAPEVVTRK 192
Query: 1017 QPTKEADVYSFGIVLLEILTGRKPVM 1042
+ D++S GI+ +E++ G P +
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYL 218
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand Complex
Length = 288
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYY 901
+ G YG+++KA G +++++R DE +T +E L ++KH N+ L Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 902 AGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
RL LV++++ + +L LL +G + + + + L L G+++ H ++
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVC---EGGLESVTAKSFL-LQLLNGIAYCHDRRVL 122
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA-ASTGQPT 1019
H D+KPQN+L + + E +++FGL R A P T I +L Y +P+ + + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR-AFGIPVR--KYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 1020 KEADVYSFGIVLLEILTG 1037
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L Y G D +V +Y+ G+L ++ E +G + + + L FLHS
Sbjct: 83 LDSYLVG--DELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHS 134
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
++H DIK N+L D L++FG A TP E S + +G+ +++PE +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGF--CAQITP-EQSKRSEMVGTPYWMAPEVVTRK 191
Query: 1017 QPTKEADVYSFGIVLLEILTGRKPVM 1042
+ D++S GI+ +E++ G P +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYL 217
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 112/220 (50%), Gaps = 17/220 (7%)
Query: 844 VLSRGRYGLIFKASYQ----DGMVLSIRRLR-DGTID-ENTFRKEAEALGKVKHRNLTVL 897
+L G +G +++ Y + + ++++ + D T+D + F EA + + H ++ L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
G P ++ + P G L L+ ++ + L L SL + + +++L S+
Sbjct: 75 IGIIEEEPT--WIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+ VH DI +N+L + L +FGL R + +AS + PI ++SPE+ +
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI---KWMSPESINFR 185
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ T +DV+ F + + EIL+ G++P + +++D++ ++K
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK 225
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 112/220 (50%), Gaps = 17/220 (7%)
Query: 844 VLSRGRYGLIFKASYQ----DGMVLSIRRLR-DGTID-ENTFRKEAEALGKVKHRNLTVL 897
+L G +G +++ Y + + ++++ + D T+D + F EA + + H ++ L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
G P ++ + P G L L+ ++ + L L SL + + +++L S+
Sbjct: 79 IGIIEEEPT--WIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+ VH DI +N+L + L +FGL R + +AS + PI ++SPE+ +
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI---KWMSPESINFR 189
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ T +DV+ F + + EIL+ G++P + +++D++ ++K
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK 229
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTV 896
+ G++G + + Y M ++I+ ++ T D F +EA + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L G P ++ + G L + LQ L+ L + L+ L++L S
Sbjct: 76 LIGVITENP--VWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLES 129
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAAST 1015
VH DI +NVL A L +FGL R + +T +AS PI +++PE+ +
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESINF 186
Query: 1016 GQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into
Receptor Autoregulation
Length = 343
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 32/239 (13%)
Query: 845 LSRGRYGLIFKAS------YQDGMVLSIRRLRD-GTID-ENTFRKEAEALGKVKHRNLTV 896
+ G +G +F+A Y+ +++++ L++ + D + F++EA + + + N+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 897 LRGYYA-GPPDVRLLVYDYMPNGNLATLLQEAS--------HQDGHV-----------LN 936
L G A G P L+++YM G+L L+ S H D L+
Sbjct: 115 LLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
+ I+ +A G+++L VH D+ +N L + +++FGL R + +
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 232
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVK 1054
I + ++ PE+ + T E+DV+++G+VL EI + G +P E+++ +V+
Sbjct: 233 DGNDAI-PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR 290
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V+++ ++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V+++ ++R T E +T +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 64 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + T + +L
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVR--TYTHEVVTL 166
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT Peptide
From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization Of
Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 33/231 (14%)
Query: 833 LEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGK 888
L + F + + G YG+++KA + G V++++++R T E +T +E L +
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPM 939
+ H N+ V+LL D + N L+ E HQD + P+
Sbjct: 63 LNHPNI------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL 108
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P
Sbjct: 109 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE 167
Query: 1000 TPIGSLGYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ +L Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 --VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 214
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 33/231 (14%)
Query: 833 LEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGK 888
L + F + + G YG+++KA + G V++++++R T E +T +E L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPM 939
+ H N+ V+LL D + N L+ E HQD + P+
Sbjct: 62 LNHPNI------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL 107
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE 166
Query: 1000 TPIGSLGYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ +L Y +PE + A D++S G + E++T R +F D +I
Sbjct: 167 --VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase
5
Length = 295
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 30/224 (13%)
Query: 833 LEATRQFDEEN---VLSRGRYGLIFKASYQDGMV-LSIRRLRDGTIDENTFRKEAEALGK 888
LE ++DE VL +G YG+++ V ++I+ + + + E AL K
Sbjct: 15 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 74
Query: 889 -VKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNW-PMRH----- 941
+KH+N+ G ++ +++ + + +P G+L+ LL+ W P++
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRS---------KWGPLKDNEQTI 124
Query: 942 -LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGL-DRLAIATPAEASSS 998
+ + GL +LH +VH DIK NVL + +S+FG RLA P +
Sbjct: 125 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC----T 180
Query: 999 TTPIGSLGYVSPEAASTGQP--TKEADVYSFGIVLLEILTGRKP 1040
T G+L Y++PE G K AD++S G ++E+ TG+ P
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A Gamma-
Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With A
Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN Complex
With The Inhibitor N-&-N1
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 67 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 169
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 212
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 30/224 (13%)
Query: 833 LEATRQFDEEN---VLSRGRYGLIFKASYQDGMV-LSIRRLRDGTIDENTFRKEAEALGK 888
LE ++DE VL +G YG+++ V ++I+ + + + E AL K
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 889 -VKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNW-PMRH----- 941
+KH+N+ G ++ +++ + + +P G+L+ LL+ W P++
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRS---------KWGPLKDNEQTI 110
Query: 942 -LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEA-HLSEFGL-DRLAIATPAEASSS 998
+ + GL +LH +VH DIK NVL + +S+FG RLA P +
Sbjct: 111 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC----T 166
Query: 999 TTPIGSLGYVSPEAASTGQP--TKEADVYSFGIVLLEILTGRKP 1040
T G+L Y++PE G K AD++S G ++E+ TG+ P
Sbjct: 167 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLT 895
F+ + L G G++ K ++ ++ R+L I N +E + L + +
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G + ++ + + ++M G+L +L+EA +L +S+ + RGL++L
Sbjct: 78 GFYGAFYSDGEISICM-EHMDGGSLDQVLKEAKRIPEEILGK-----VSIAVLRGLAYLR 131
Query: 956 SL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
++H D+KP N+L ++ E L +FG+ I S + + +G+ Y++PE
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSFVGTRSYMAPERLQ 186
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKPV 1041
+ ++D++S G+ L+E+ GR P+
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4-
Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 66 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 168
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis-
Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTV 896
+ G++G + + Y + ++I+ ++ T D F +EA + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L G P ++ + G L + LQ + L+ L + L+ L++L S
Sbjct: 76 LIGVITENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLES 129
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAAST 1015
VH DI +NVL ++ L +FGL R + +T +AS PI +++PE+ +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESINF 186
Query: 1016 GQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap) In
Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site Phosphorylation:
Cdk2 Y15p T160p In Complex With Cyclin A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium Ion
Length = 298
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 64 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 166
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 209
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYY 901
+ G YG+++KA G +++++R DE +T +E L ++KH N+ L Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 902 AGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
RL LV++++ + +L LL +G + + + + L L G+++ H ++
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVC---EGGLESVTAKSFL-LQLLNGIAYCHDRRVL 122
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA-ASTGQPT 1019
H D+KPQN+L + + E +++FGL R A P T + +L Y +P+ + + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR-AFGIPVR--KYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 1020 KEADVYSFGIVLLEILTG 1037
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS
Length = 296
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 64 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 166
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 209
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 68 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 170
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTV 896
+ G++G + + Y + ++I+ ++ T D F +EA + + H ++
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L G P ++ + G L + LQ + L+ L + L+ L++L S
Sbjct: 81 LIGVITENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLES 134
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAAST 1015
VH DI +NVL ++ L +FGL R + +T +AS PI +++PE+ +
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESINF 191
Query: 1016 GQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The
Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 844 VLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVL 897
+ G++G + + Y + ++I+ ++ T D F +EA + + H ++ L
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
G P ++ + G L + LQ + L+ L + L+ L++L S
Sbjct: 105 IGVITENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESK 158
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
VH DI +NVL ++ L +FGL R + +T +AS PI +++PE+ +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESINFR 215
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 67 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 169
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTV 896
+ G++G + + Y + ++I+ ++ T D F +EA + + H ++
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L G P ++ + G L + LQ + L+ L + L+ L++L S
Sbjct: 73 LIGVITENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLES 126
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAAST 1015
VH DI +NVL ++ L +FGL R + +T +AS PI +++PE+ +
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESINF 183
Query: 1016 GQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYY 901
+ G YG+++KA G +++++R DE +T +E L ++KH N+ L Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 902 AGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
RL LV++++ + +L LL +G + + + + L L G+++ H ++
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVC---EGGLESVTAKSFL-LQLLNGIAYCHDRRVL 122
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA-ASTGQPT 1019
H D+KPQN+L + + E +++FGL R A P T + +L Y +P+ + + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR-AFGIPVR--KYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 1020 KEADVYSFGIVLLEILTG 1037
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From The
Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 30/225 (13%)
Query: 837 RQFDEENVLSRGRYGLIFKASYQDGM-VLSIRRLRDGTIDE---NTFRKEAEALGKVKHR 892
+++++ + G YG +FKA ++ +++++R+R DE ++ +E L ++KH+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 893 NLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQD--------GHVLNWPMRHLIS 944
N+ VRL +D + + TL+ E QD L+ +
Sbjct: 62 NI------------VRL--HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
L +GL F HS +++H D+KPQN+L + + E L+ FGL R A P S+ + +
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAE--VVT 164
Query: 1005 LGYVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
L Y P+ + + D++S G + E+ +P+ D D
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLT 895
+D +VL G + +I + +++I+ + ++ E + E L K+KH N+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
L Y + L++ + G L + E G LI + + +LH
Sbjct: 80 ALDDIYESGGHLYLIM-QLVSGGELFDRIVEK----GFYTERDASRLI-FQVLDAVKYLH 133
Query: 956 SLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
L +VH D+KP+N+L+ D D + +S+FGL ++ S +T G+ GYV+PE
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME----DPGSVLSTACGTPGYVAPEV 189
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
+ +K D +S G++ +L G P D + + + K
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTV 896
+ G++G + + Y + ++I+ ++ T D F +EA + + H ++
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L G P ++ + G L + LQ + L+ L + L+ L++L S
Sbjct: 79 LIGVITENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLES 132
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAAST 1015
VH DI +NVL ++ L +FGL R + +T +AS PI +++PE+ +
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESINF 189
Query: 1016 GQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 190 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine
Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 117/240 (48%), Gaps = 21/240 (8%)
Query: 831 ETLEATRQFDEENVLSRGRYGLIFKASY--QDG--MVLSIRRLRDGTI---DENTFRKEA 883
+ L +QF +L +G +G + +A +DG + ++++ L+ I D F +EA
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 884 EALGKVKHRNL-----TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWP 938
+ + H ++ LR G + +++ +M +G+L L AS + N P
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-ASRIGENPFNLP 135
Query: 939 MRHLIS--LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP--AE 994
++ L+ + +A G+ +L S + +H D+ +N + D +++FGL R + +
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
Query: 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
+S P+ +++ E+ + T +DV++FG+ + EI+T G+ P ++ +I ++
Sbjct: 196 GCASKLPV---KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL 252
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLR 898
F+ E+ L RG ++++ + ++ T+D+ R E L ++ H N+ L+
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 899 GYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD 958
+ P ++ LV + + G L + E + ++ ++ +++LH
Sbjct: 115 EIFETPTEIS-LVLELVTGGELFDRIVEKGYYSERDAADAVKQILE-----AVAYLHENG 168
Query: 959 MVHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAST 1015
+VH D+KP+N+L+ D +++FGL ++ T G+ GY +PE
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV----EHQVLMKTVCGTPGYCAPEILRG 224
Query: 1016 GQPTKEADVYSFGIVLLEILTGRKP 1040
E D++S GI+ +L G +P
Sbjct: 225 CAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 896 VLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL 954
V++ +YA D L +V +YMP G+L L+ + W + + LA L +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE----KWARFYTAEVVLA--LDAI 189
Query: 955 HSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS-SSTTPIGSLGYVSPEAA 1013
HS+ +H D+KP N+L D L++FG + E T +G+ Y+SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFG---TCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 1014 ST----GQPTKEADVYSFGIVLLEILTGRKP 1040
+ G +E D +S G+ L E+L G P
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 66 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 168
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 211
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 896 VLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL 954
V++ +YA D L +V +YMP G+L L+ + W + + LA L +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE----KWARFYTAEVVLA--LDAI 189
Query: 955 HSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS-SSTTPIGSLGYVSPEAA 1013
HS+ +H D+KP N+L D L++FG + E T +G+ Y+SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFG---TCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 1014 ST----GQPTKEADVYSFGIVLLEILTGRKP 1040
+ G +E D +S G+ L E+L G P
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 896 VLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL 954
V++ +YA D L +V +YMP G+L L+ + W + + LA L +
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE----KWARFYTAEVVLA--LDAI 184
Query: 955 HSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS-SSTTPIGSLGYVSPEAA 1013
HS+ +H D+KP N+L D L++FG + E T +G+ Y+SPE
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFG---TCMKMNKEGMVRCDTAVGTPDYISPEVL 241
Query: 1014 ST----GQPTKEADVYSFGIVLLEILTGRKP 1040
+ G +E D +S G+ L E+L G P
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain Complexed
With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTV 896
+ G++G + + Y + ++I+ ++ T D F +EA + + H ++
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L G P ++ + G L + LQ + L+ L + L+ L++L S
Sbjct: 78 LIGVITENP--VWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLES 131
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASSSTTPIGSLGYVSPEAAST 1015
VH DI +NVL ++ L +FGL R + +T +AS PI +++PE+ +
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESINF 188
Query: 1016 GQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
+ T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 189 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 24/234 (10%)
Query: 832 TLEATRQFDEEN-------VLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENT 878
T+ +TR ++ + + G++G + + Y M ++I+ ++ T D
Sbjct: 378 TMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK 437
Query: 879 FRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWP 938
F +EA + + H ++ L G P ++ + G L + LQ L+
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFS----LDLA 491
Query: 939 MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASS 997
L + L+ L++L S VH DI +NVL A L +FGL R + +T +AS
Sbjct: 492 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 551
Query: 998 STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
PI +++PE+ + + T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 552 GKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVK 890
+L F+E VL +G +G + KA D +I+++R +T E L +
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLN 60
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR- 949
H+ V+R YYA + R V +TL + + + L + + H +L R
Sbjct: 61 HQ--YVVR-YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL-YDLIHSENLNQQRD 116
Query: 950 -----------GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG--------LDRLAIA 990
LS++HS ++H ++KP N+ D + +FG LD L +
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 991 T---PAEASSSTTPIGSLGYVSPEAAS-TGQPTKEADVYSFGIVLLEIL 1035
+ P + + T+ IG+ YV+ E TG ++ D YS GI+ E +
Sbjct: 177 SQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VLS G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 83 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 132
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 190
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 191 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 832 TLEATRQFDEEN-------VLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENT 878
T+ +TR ++ + + G++G + + Y M ++I+ ++ T D
Sbjct: 378 TMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK 437
Query: 879 FRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWP 938
F +EA + + H ++ L G P ++ + G L + LQ L+
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFS----LDLA 491
Query: 939 MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR-LAIATPAEASS 997
L + L+ L++L S VH DI +NVL ++ L +FGL R + +T +AS
Sbjct: 492 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551
Query: 998 STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIV 1050
PI +++PE+ + + T +DV+ FG+ + EIL G KP ++ D++
Sbjct: 552 GKLPI---KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor A-
443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of 4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHRN 893
FD +L +G +G +I G +++ LR I DE E+ L +H
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 894 LTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ YA RL V +Y G L L V + L
Sbjct: 72 LTALK--YAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALE 124
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
+LHS D+V+ DIK +N++ D D +++FGL + I ++ ++ G+ Y++PE
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI---SDGATMKXFCGTPEYLAPEV 181
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHRN 893
FD +L +G +G +I G +++ LR I DE E+ L +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 894 LTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ YA RL V +Y G L L V + L
Sbjct: 67 LTALK--YAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALE 119
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
+LHS D+V+ DIK +N++ D D +++FGL + I ++ ++ G+ Y++PE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI---SDGATMKXFCGTPEYLAPEV 176
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VLS G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 125
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 183
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 170 LDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTL 229
+D SS T IP N + ++ ++L N S + +L +L L+L+ N L TL
Sbjct: 21 VDCSSKKLTA-IPSNIPADTKK--LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TL 76
Query: 230 PSAI-SNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGN 288
P+ I +L L DN L+ L G ++ L L L RN+L L P ++ +
Sbjct: 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPP-----RVFDS 131
Query: 289 ISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSG 348
++ L + LG+N + K + S+ E L L NN+++ V +T L+ + L
Sbjct: 132 LTKLTYLSLGYNELQSLPKGVFDKLTSLKE-LRLYNNQLKRVPEGAFDKLTELKTLKLDN 190
Query: 349 NFFSGNLPAAVGSLDKLEVLRVANN 373
N A SL+KL++L++ N
Sbjct: 191 NQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 73/195 (37%), Gaps = 16/195 (8%)
Query: 96 ELRKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFXXXXXXXXXXXXXXX 155
+ +KL L SN L+ + H+ + LR +YL N LP IF
Sbjct: 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIF---KELKNLETLWVT 93
Query: 156 SGKISA------DISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASV 209
K+ A D +L L L N P F S ++L ++L YN
Sbjct: 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVF 153
Query: 210 GQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLS 269
+L L+ L L +N L A + L L ++N LK + G + L++L L
Sbjct: 154 DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213
Query: 270 RNELTGLVPVSVLCN 284
N P CN
Sbjct: 214 EN------PWDCTCN 222
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 499 IPGSIGSLMRLTTLDLSNQNLSGELPIELFG-LPSLQVVSLEENNLSGDVPEG-FSSLVG 556
IP +I + + LDL + LS LP + F L L+++ L +N L +P G F L
Sbjct: 31 IPSNIPADTK--KLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKN 86
Query: 557 LQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFT 616
L+ L ++DN + L +L L L NQ+ + P + + L L L N
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 617 GNIPVDI-SHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPE 669
+P + L+ +K+L L N+L K + L +L LD N L R+PE
Sbjct: 147 S-LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPE 198
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYA--GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+KE E L + H N+ +G G ++L++ +++P+G+L L + ++ +N
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM-EFLPSGSLKEYLPKNKNK----IN 112
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
+ ++ + +G+ +L S VH D+ +NVL +++ + + +FGL + AI T E
Sbjct: 113 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXX 171
Query: 997 SSTTPIGS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ S + + +PE + +DV+SFG+ L E+LT
Sbjct: 172 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 843 NVLSRGRYGLIFKASY-------QDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLT 895
VL G +G ++K + + + + I G F EA + + H +L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH--VLNWPMRHLISLGLARGLSF 953
L G P LV MP+G L + E G +LNW + +A+G+ +
Sbjct: 104 RLLGVCLSP--TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMY 155
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGSLGYVSPE 1011
L +VH D+ +NVL + +++FGL RL E A PI +++ E
Sbjct: 156 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI---KWMALE 212
Query: 1012 AASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+ T ++DV+S+G+ + E++T G KP
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VLS G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 83 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 132
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 190
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 191 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide Complex
Length = 286
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 56 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 113
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 114 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 167
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3
Length = 286
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 58 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 115
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 116 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 169
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-8
Length = 289
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 59 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 116
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 117 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 170
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 57 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 114
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 115 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 168
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With
Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHRN 893
FD +L +G +G +I G +++ LR I DE E+ L +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 894 LTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ YA RL V +Y G L L V + L
Sbjct: 67 LTALK--YAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALE 119
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
+LHS D+V+ DIK +N++ D D +++FGL + I ++ ++ G+ Y++PE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI---SDGATMKXFCGTPEYLAPEV 176
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +YMP G+L L+ + W + + LA L +HS+ ++H D+KP N+
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPE----KWAKFYTAEVVLA--LDAIHSMGLIHRDVKPDNM 205
Query: 970 LFDADFEAHLSEFG----LDRLAIATPAEASSSTTPIGSLGYVSPEAAST----GQPTKE 1021
L D L++FG +D + T +G+ Y+SPE + G +E
Sbjct: 206 LLDKHGHLKLADFGTCMKMDETGMV------HCDTAVGTPDYISPEVLKSQGGDGYYGRE 259
Query: 1022 ADVYSFGIVLLEILTGRKP 1040
D +S G+ L E+L G P
Sbjct: 260 CDWWSVGVFLFEMLVGDTP 278
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYA--GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+KE E L + H N+ +G G ++L++ +++P+G+L L + ++ +N
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM-EFLPSGSLKEYLPKNKNK----IN 124
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
+ ++ + +G+ +L S VH D+ +NVL +++ + + +FGL + AI T E
Sbjct: 125 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXX 183
Query: 997 SSTTPIGS-LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ S + + +PE + +DV+SFG+ L E+LT
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 839 FDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHRN 893
FD +L +G +G +I G +++ LR I DE E+ L +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 894 LTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ YA RL V +Y G L L V + L
Sbjct: 67 LTALK--YAFQTHDRLCFVMEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALE 119
Query: 953 FLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
+LHS D+V+ DIK +N++ D D +++FGL + I ++ ++ G+ Y++PE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI---SDGATMKXFCGTPEYLAPEV 176
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 211
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 78 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 135
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 136 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 189
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 843 NVLSRGRYGLIFKASY-------QDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLT 895
VL G +G ++K + + + + I G F EA + + H +L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH--VLNWPMRHLISLGLARGLSF 953
L G P LV MP+G L + E G +LNW + +A+G+ +
Sbjct: 81 RLLGVCLSP--TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMY 132
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGSLGYVSPE 1011
L +VH D+ +NVL + +++FGL RL E A PI +++ E
Sbjct: 133 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI---KWMALE 189
Query: 1012 AASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+ T ++DV+S+G+ + E++T G KP
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 67 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KP+N+L + + L++FGL R A P + +L
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 169
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With Atp
Length = 302
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 833 LEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGK 888
L + F + + G YG+++KA + G V++++++R T E +T +E L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLA 948
+ H N+ L + LV++++ + +L + +AS G + P+ L
Sbjct: 62 LNHPNIVKLLDVIHTENKL-YLVFEFL-SMDLKDFM-DASALTG--IPLPLIKSYLFQLL 116
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L Y
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTLWYR 173
Query: 1009 SPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+PE + A D++S G + E++T R +F D +I
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 213
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation
At Position 52
Length = 364
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++IR++ T + T R E + L + +H N+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 146
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFR---KEAE 884
Y +++E +++ ++ G YG++ K +D G +++I++ + D+ + +E +
Sbjct: 20 YFQSME---KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK 76
Query: 885 ALGKVKHRNLTVL-------RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNW 937
L +++H NL L + +Y LV++++ + L L + D V+
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWY--------LVFEFVDHTILDDLELFPNGLDYQVVQK 128
Query: 938 PMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997
+ +I+ G+ F HS +++H DIKP+N+L L +FG R +A P E
Sbjct: 129 YLFQIIN-----GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFAR-TLAAPGEVYD 182
Query: 998 STTPIGSLGYVSPE-AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ + Y +PE + K DV++ G ++ E+ G +F D DI
Sbjct: 183 DE--VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEP--LFPGDSDI 231
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex
With Atp
Length = 299
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV---------LNWPMRHLISL 945
V+LL D + N L+ E HQD + P+
Sbjct: 66 ------------VKLL--DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KP+N+L + + L++FGL R A P + +L
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 168
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of
3brb-Pp1
Length = 298
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 41/237 (17%)
Query: 838 QFDEENVLSRGRYGLIF----KASYQDGMV--LSIRRLRDGTIDENTFRKEAEALGKVKH 891
++ + VL +G +G + K + Q+ V +S R+++ T D+ + +E + L ++ H
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLREVQLLKQLDH 91
Query: 892 RNLTVL------RGYYAGPPDVRLLVYDYMPNGNLATLL---QEASHQDGHVLNWPMRHL 942
N+ L +GY+ LV + G L + + S D + +R +
Sbjct: 92 PNIMKLYEFFEDKGYF-------YLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQV 141
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSST 999
+S G++++H +VH D+KP+N+L ++ D + +FGL +T EAS
Sbjct: 142 LS-----GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEASKKM 191
Query: 1000 T-PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
IG+ Y++PE G ++ DV+S G++L +L+G P + DI+K V+K
Sbjct: 192 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK 247
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLR------DGTIDENTFRKEAEALGKVKH 891
F+ +L +G +G +F A ++ +I+ L+ D ++ K +L +H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEH 78
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
LT + + ++ V +Y+ G+L +Q H + + + GL
Sbjct: 79 PFLTHMFCTFQTKENL-FFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGL 132
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011
FLHS +V+ D+K N+L D D +++FG+ + + A+ + G+ Y++PE
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC---GTPDYIAPE 189
Query: 1012 AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D +SFG++L E+L G+ P QDE+
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQSP-FHGQDEE 225
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase-
1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine
Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 82 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 139
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 140 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 193
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 833 LEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGK 888
L + F + + G YG+++KA + G V++++++R T E +T +E L +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLA 948
+ H N+ L + LV++++ + +L + +AS G + P+ L
Sbjct: 61 LNHPNIVKLLDVIHTENKL-YLVFEFL-SMDLKDFM-DASALTG--IPLPLIKSYLFQLL 115
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+GL+F HS ++H D+KPQN+L + + L++FGL R A P + +L Y
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTLWYR 172
Query: 1009 SPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+PE + A D++S G + E++T R +F D +I
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 212
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 109
Query: 901 YAGP-----PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
P DV L+ + + +L LL+ + H+ + + + RGL ++H
Sbjct: 110 IRAPTIEQMKDVYLVTH--LMGADLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIH 161
Query: 956 SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAST 1015
S +++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 1016 GQ-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNW 937
FR+E + L + +T L +YA + L LV DY G+L TLL + + L
Sbjct: 137 FREERDVLVNGDCQWITAL--HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK----LPE 190
Query: 938 PMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997
M + + +H L VH DIKP NVL D + L++FG L + S
Sbjct: 191 DMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQS 249
Query: 998 STTPIGSLGYVSPEAAST-----GQPTKEADVYSFGIVLLEILTGRKP 1040
S +G+ Y+SPE G+ E D +S G+ + E+L G P
Sbjct: 250 SVA-VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 880 RKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPM 939
R+E + L +H ++ L + P D+ +V +Y+ G L + ++G +
Sbjct: 64 RREIQNLKLFRHPHIIKLYQVISTPSDI-FMVMEYVSGGELFDYIC----KNGRLDEKES 118
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
R L L+ G+ + H +VH D+KP+NVL DA A +++FGL + ++
Sbjct: 119 RRLFQQILS-GVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLR 173
Query: 1000 TPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQ 1058
GS Y +PE S E D++S G++L +L G P D+D V + K++
Sbjct: 174 XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF----DDDHVPTLFKKIC 229
Query: 1059 RG 1060
G
Sbjct: 230 DG 231
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQD-------GHVLNWPMRHLIS--L 945
V+LL D + N L+ E HQD + P+ + S
Sbjct: 65 ------------VKLL--DVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L +GL+F HS ++H D+KP+N+L + + L++FGL R A P + +L
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTL 167
Query: 1006 GYVSPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
Y +PE + A D++S G + E++T R +F D +I
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 210
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 63 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 120
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 121 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 174
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 81 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYT 138
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 139 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 192
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +G+ YVSPE + +K +D+++ G ++ +++ G P
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 78 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 135
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 136 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 189
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL 954
L + LV++++ + +L + +AS G + P+ L +GL+F
Sbjct: 68 VKLLDVIHTENKL-YLVFEHV-DQDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 955 HSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
HS ++H D+KPQN+L + + L++FGL R A P + +L Y +PE
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTLWYRAPEILL 179
Query: 1015 TGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ A D++S G + E++T R +F D +I
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 79 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 137 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 190
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 125
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 183
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor
1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Activator
Js30
Length = 316
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 86 RERDVMSRLDHPFFVKL--YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 143
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 144 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 197
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNW 937
FR+E + L + +T L +YA + L LV DY G+L TLL + + L
Sbjct: 121 FREERDVLVNGDCQWITAL--HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK----LPE 174
Query: 938 PMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997
M + + +H L VH DIKP NVL D + L++FG L + S
Sbjct: 175 DMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQS 233
Query: 998 STTPIGSLGYVSPEAAST-----GQPTKEADVYSFGIVLLEILTGRKP 1040
S +G+ Y+SPE G+ E D +S G+ + E+L G P
Sbjct: 234 SVA-VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 79 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 137 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 190
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 81 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 139 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 192
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 79 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 128
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 186
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 187 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 79 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 137 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 190
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 77 NPHVCRLLGICLT--STVQLIMQLMPFGXLLDYVRE--HKDNIGSQYLLNW------CVQ 126
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 184
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 185 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRD-GTIDENTFRKEAEALGKVKHRNL 894
+Q + L+ G ++K +Q + +V+ + ++RD T F +E L H N+
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 895 TVLRGYYAGPPDVR-LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
+ G PP L+ +MP G+L +L E + V++ +L +ARG++F
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAF 126
Query: 954 LHSLD--MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011
LH+L+ + + ++V+ D D A R+++A + S + + +V+PE
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTA--------RISMADVKFSFQSPGRMYAPAWVAPE 178
Query: 1012 AASTGQP---TKEADVYSFGIVLLEILTGRKP 1040
A + AD++SF ++L E++T P
Sbjct: 179 ALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 77 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 126
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 184
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 185 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ucn-01
Length = 310
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 79 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 137 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 190
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 78 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 127
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 185
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 186 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 81 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 139 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 192
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 76 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 125
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 183
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 142
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In
Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 81 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 139 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 192
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 81 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 139 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 192
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 91
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 92 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 144
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind
E804
Length = 324
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 845 LSRGRYGLIFKASYQ--DGMV-LSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
L G Y ++K + D +V L RL T +E L +KH N+ L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVH 961
+ L V++Y+ + +L L + G+++N L L RGL++ H ++H
Sbjct: 70 HTEKSLTL-VFEYL-DKDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHRQKVLH 123
Query: 962 GDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA--ASTGQPT 1019
D+KPQN+L + E L++FGL R A + P + + + +L Y P+ ST T
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDN--EVVTLWYRPPDILLGSTDYST 180
Query: 1020 KEADVYSFGIVLLEILTGR 1038
+ D++ G + E+ TGR
Sbjct: 181 -QIDMWGVGCIFYEMATGR 198
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 80 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 129
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 187
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 188 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 84 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 141
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 142 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 195
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENIIGINDI 93
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 146
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 82 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 139
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 140 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 193
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 142
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein
Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain)
Length = 276
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 880 RKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPM 939
++E + L +H ++ L + P D +V +Y+ G L + + G V
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDF-FMVMEYVSGGELFDYIC----KHGRVEEMEA 113
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
R L L+ + + H +VH D+KP+NVL DA A +++FGL + ++
Sbjct: 114 RRLFQQILS-AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLR 168
Query: 1000 TPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
T GS Y +PE S E D++S G++L +L G P DE + KK
Sbjct: 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF---DDEHVPTLFKK 222
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The
Structure Of The Cdk6-P16ink4a Tumor Suppressor Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 835 ATRQFDEENVLSRGRYGLIFKAS--YQDGMVLSIRRLRDGTIDE----NTFRKEA--EAL 886
A +Q++ + G YG +FKA G ++++R+R T +E +T R+ A L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 887 GKVKHRNLTVLRGYYAGPPDVR----LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
+H N+ L R LV++++ + +L T L + + V ++ +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVP--EPGVPTETIKDM 125
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ L RGL FLHS +VH D+KPQN+L + + L++FGL R+ + + T+ +
Sbjct: 126 M-FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVV 180
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+L Y +PE D++S G + E+ RKP+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGXLLDYVRE--HKDNIGSQYLLNW------CVQ 125
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 183
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 138/323 (42%), Gaps = 46/323 (14%)
Query: 162 DISP---------SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQL 212
DISP S+ ++L + F F S LQ ++L+ S E+P+ + L
Sbjct: 242 DISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGL 300
Query: 213 QELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLK-GLIPGTIGRISTLQVLSLSRN 271
L+ L L +N + SN SL HLS + N + L G + + L+ L LS +
Sbjct: 301 STLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHD 360
Query: 272 ELTGLVPVSVLCNL-WGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAV 330
+ + S CNL N+S L+ + L +N + C LE+LDL R++
Sbjct: 361 D----IETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQ-LELLDLAFTRLKVK 415
Query: 331 -FPSWLTNVTSLRVMDLS------------------------GNFF-SGNLPA--AVGSL 362
S N+ L+V++LS GN F GN+ ++ +L
Sbjct: 416 DAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTL 475
Query: 363 DKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNM 422
+LE+L ++ LS + ++ DL NR + L ++G+ ++L N
Sbjct: 476 GRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNH 534
Query: 423 FSGLIPLSFGNLSQLETLNLSEN 445
S ++P LSQ T+NL +N
Sbjct: 535 ISIILPSLLPILSQQRTINLRQN 557
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 140/355 (39%), Gaps = 38/355 (10%)
Query: 288 NISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFP---SWLTNVTSLRVM 344
N +L + LG N + + K P G L+VLD QNN I + S L T+L +
Sbjct: 127 NQKTLESLYLGSNHISSI-KLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS-L 184
Query: 345 DLSGNFFSGNLPAAVGSLDKLEVLRVANNS--------LSGLVPDEIAKCSLLQMFDLEG 396
+L+GN +G P A S V + N GL I L D++
Sbjct: 185 NLNGNDIAGIEPGAFDS----AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDD 240
Query: 397 NRFSGQVPAFLGGIRGLKI--VSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEE 454
S PA G+ + + ++L ++ F + +F S L+ L+L+ + +P
Sbjct: 241 EDIS---PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSG 296
Query: 455 ITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGKIP---GSIGSLMRLTT 511
+ NKF S G + ++ G + +L L
Sbjct: 297 LVGLSTLKKLVLSANKFENLC--QISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRE 354
Query: 512 LDLSNQNL--SGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFT- 568
LDLS+ ++ S ++L L LQ ++L N E F L+ L+L AFT
Sbjct: 355 LDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL---AFTR 411
Query: 569 ---GDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHF-TGNI 619
D + + L L L+LSH+ + AL+ L L+ NHF GNI
Sbjct: 412 LKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNI 466
Score = 30.0 bits (66), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 533 LQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAF-TGDIPATYGF--LRSLVFLSLSHN 589
L+V++L + L + F L LQ+LNL N F G+I T L L L LS
Sbjct: 427 LKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFC 486
Query: 590 QISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISK 649
+S + + + ++L N T + +SHL I L+L N +S +P +
Sbjct: 487 DLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPI 545
Query: 650 CSSLVSLTLDMNSL 663
S ++ L N L
Sbjct: 546 LSQQRTINLRQNPL 559
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 110/225 (48%), Gaps = 20/225 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIR-RLRDGTIDENT-------FRKEAEAL-GKVKHRNLT 895
L +G +G++++ + +D + R+ T++E+ F EA + G H +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ----EASHQDGHVLNWPMRHLISLG--LAR 949
+L G P L+V + M +G+L + L+ EA + G ++ +I + +A
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIAD 141
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
G+++L++ VH D+ +N + DF + +FG+ R I A + + +++
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-DIYETAYYRKGGKGLLPVRWMA 200
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
PE+ G T +D++SFG+VL EI + +P +E ++K+V
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 97
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 98 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 150
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 142
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Compound
Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLV-YDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E + + ++ H L Y+ D +L Y NG L +++ D +
Sbjct: 81 RERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
++S L +LH ++H D+KP+N+L + D +++FG ++ ++ ++ + +
Sbjct: 139 AEIVS-----ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARAN 192
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ YVSPE + K +D+++ G ++ +++ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With Amp-
Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 125
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 183
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 79 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 128
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 186
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 187 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 109
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 110 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 162
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With Atp
Length = 301
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 833 LEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGK 888
L + F + + G YG+++KA + G V++++++R T E +T +E L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLA 948
+ H N+ L + LV++++ + +L + +AS G + P+ L
Sbjct: 62 LNHPNIVKLLDVIHTENKL-YLVFEFL-SMDLKKFM-DASALTG--IPLPLIKSYLFQLL 116
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+GL+F HS ++H D+KP+N+L + + L++FGL R A P + +L Y
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTLWYR 173
Query: 1009 SPEAASTGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+PE + A D++S G + E++T R +F D +I
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 213
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 79 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 128
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 186
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 187 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 70 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 119
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 120 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 177
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 178 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 87
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 88 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 140
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 78 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 127
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 185
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 186 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 83 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 132
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 190
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 191 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 86 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 135
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 136 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 193
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 194 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 835 ATRQFDEENVLSRGRYGLIFKAS--YQDGMVLSIRRLRDGTIDE----NTFRKEA--EAL 886
A +Q++ + G YG +FKA G ++++R+R T +E +T R+ A L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 887 GKVKHRNLTVLRGYYAGPPDVR----LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
+H N+ L R LV++++ + +L T L + + V ++ +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVP--EPGVPTETIKDM 125
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ L RGL FLHS +VH D+KPQN+L + + L++FGL R+ + + T+ +
Sbjct: 126 M-FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVV 180
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+L Y +PE D++S G + E+ RKP+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain With
4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 82 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 131
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 132 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 189
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 190 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 94
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 95 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 147
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 95
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 96 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 148
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 86
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 87 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 139
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 146
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 87
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 88 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 140
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent Kinase
6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 835 ATRQFDEENVLSRGRYGLIFKAS--YQDGMVLSIRRLRDGTIDE----NTFRKEA--EAL 886
A +Q++ + G YG +FKA G ++++R+R T +E +T R+ A L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 887 GKVKHRNLTVLRGYYAGPPDVR----LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL 942
+H N+ L R LV++++ + +L T L + + V ++ +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVP--EPGVPTETIKDM 125
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ L RGL FLHS +VH D+KPQN+L + + L++FGL R+ + + T+ +
Sbjct: 126 M-FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVV 180
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+L Y +PE D++S G + E+ RKP+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 142
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 79 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 128
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 186
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 187 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 99
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 100 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 151
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R A T + + Y +PE +
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGYVATRWYRAPEIMLNWM 205
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDGMVLSIRRL-RDGTIDENTFRKEAEALGKVKHRNLTV 896
Q + ++ +GR+G ++ + + + + + RD F++E A + +H N+ +
Sbjct: 34 QLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
G PP + ++ L +++++A VL+ I+ + +G+ +LH+
Sbjct: 94 FMGACMSPPHLAIIT-SLCKGRTLYSVVRDAKI----VLDVNKTRQIAQEIVKGMGYLHA 148
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI--GSLGYVSPEAAS 1014
++H D+K +NV +D + + +++FGL ++ A I G L +++PE
Sbjct: 149 KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207
Query: 1015 TGQP---------TKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKW 1052
P +K +DV++ G + E L R+ TQ + + W
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQPAEAIIW 253
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 829 YVETLEATRQFDEENVLSRGRYGLIFKA---SYQDGMVLSIRRLRDGTIDENTFRKEAEA 885
Y ++++ F + + +G +G +FK Q + + I L + + ++E
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 886 LGKVKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIS 944
L + +T G Y D +L ++ +Y+ G+ LL+ + + +R ++
Sbjct: 79 LSQCDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDLLEPGPLDETQIATI-LREIL- 134
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+GL +LHS +H DIK NVL E L++FG+ T + + T +G+
Sbjct: 135 ----KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN---TFVGT 187
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++PE +AD++S GI +E+ G P
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating
Mutant
Length = 367
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 99
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 100 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 151
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R A T + + Y +PE +
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGYVATRWYRAPEIMLNWM 205
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 146
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 99
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 100 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 151
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R A T + + Y +PE +
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGYVATRWYRAPEIMLNWM 205
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 844 VLSRGRYGLIFKA----SYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRG 899
+L +G +G + K + Q+ V I + D +T +E E L K+ H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 900 YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDM 959
+V + G L + + H ++ + S G++++H ++
Sbjct: 89 ILEDSSSF-YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS-----GITYMHKHNI 142
Query: 960 VHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
VH D+KP+N+L ++ D + + +FGL + + IG+ Y++PE G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGTAYYIAPEVLR-G 197
Query: 1017 QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVK 1054
++ DV+S G++L +L+G P + DI+K V+
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 109/228 (47%), Gaps = 33/228 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFR----KEAEALGKVKHRN 893
F +++L G YG++ A+++ G +++I+++ D+ F +E + L KH N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHEN 70
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH-VLNWPM------RHLISLG 946
+ + + D N N ++QE D H V++ M ++ I
Sbjct: 71 IITI---------FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSS-------T 999
L R + LH +++H D+KP N+L +++ + + +FGL R+ + A+ S T
Sbjct: 122 L-RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 1000 TPIGSLGYVSPEAA-STGQPTKEADVYSFGIVLLEILTGRKPVMFTQD 1046
+ + Y +PE ++ + ++ DV+S G +L E+ R+P+ +D
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRD 227
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRD---GTIDENTFRKEAEA---LGK 888
T +F E + G +G +FK + DG + +I+R + G++DE +E A LG+
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVY-DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL 947
H V+R + A D +L+ +Y G+LA + E + ++ L+ L +
Sbjct: 70 HSH----VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-LQV 124
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLF 971
RGL ++HS+ +VH DIKP N+
Sbjct: 125 GRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRD---GTIDENTFRKEAEA---LGK 888
T +F E + G +G +FK + DG + +I+R + G++DE +E A LG+
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVY-DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL 947
H V+R + A D +L+ +Y G+LA + E + ++ L+ L +
Sbjct: 68 HSH----VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-LQV 122
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLF 971
RGL ++HS+ +VH DIKP N+
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 843 NVLSRGRYGLIFKA-SYQDGMVLSIRRLRD--GTIDENTFRKEAEALGKVK-HRNLTVLR 898
+L G Y + A S Q+G +++ + G FR E E L + + ++N+ L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFR-EVETLYQCQGNKNILELI 77
Query: 899 GYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
++ D R LV++ + G++ +Q+ H N + +A L FLH+
Sbjct: 78 EFFED--DTRFYLVFEKLQGGSILAHIQKQKH-----FNEREASRVVRDVAAALDFLHTK 130
Query: 958 DMVHGDIKPQNVLFDADFE---AHLSEF----GLDRLAIATPAEASSSTTPIGSLGYVSP 1010
+ H D+KP+N+L ++ + + +F G+ TP TTP GS Y++P
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 1011 EAAS--TGQPT---KEADVYSFGIVLLEILTGRKPVM 1042
E T Q T K D++S G+VL +L+G P +
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV 227
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRD---GTIDENTFRKEAEA---LGK 888
T +F E + G +G +FK + DG + +I+R + G++DE +E A LG+
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVY-DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL 947
H V+R + A D +L+ +Y G+LA + E + ++ L+ L +
Sbjct: 68 HSH----VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-LQV 122
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLF 971
RGL ++HS+ +VH DIKP N+
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNL 894
F + + G YG+++KA + G V++++++R T E +T +E L ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL 954
L + LV++++ + +L + +AS G + P+ L +GL+F
Sbjct: 66 VKLLDVIHTENKL-YLVFEFL-SMDLKKFM-DASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 955 HSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
HS ++H D+KP+N+L + + L++FGL R A P + +L Y +PE
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHE--VVTLWYRAPEILL 177
Query: 1015 TGQPTKEA-DVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ A D++S G + E++T R +F D +I
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR--ALFPGDSEI 211
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 101 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 150
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 151 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 208
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 209 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 142
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L + +H N+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKCQHLSNDHICYFLYQ------ILRGLKYIHS 146
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase Erk1
Length = 382
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 838 QFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRL---RDGTIDENTFRKEAEALGKVKHRN 893
++ + + G YG++ A + ++I+++ T + T R E + L + +H N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHEN 102
Query: 894 LTVLRGYYAGPP-----DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLA 948
+ +R DV +V D M +L LL+ + H+ + + +
Sbjct: 103 VIGIRDILRASTLEAMRDV-YIVQDLM-ETDLYKLLKSQQLSNDHICYFLYQ------IL 154
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
RGL ++HS +++H D+KP N+L + + + +FGL R+A T + + Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 1009 SPEAA--STGQPTKEADVYSFGIVLLEILTGR 1038
+PE S G TK D++S G +L E+L+ R
Sbjct: 215 APEIMLNSKGY-TKSIDIWSVGCILAEMLSNR 245
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 35/232 (15%)
Query: 834 EATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTIDE----NTFRKEAEALGK 888
E F N+L +G + +++A S G+ ++I+ + + + + E + +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPM 939
+KH ++ L Y+ V LV + NG + L+ EA H M
Sbjct: 68 LKHPSILELYNYFEDSNYV-YLVLEMCHNGEMNRYLKNRVKPFSENEARHF--------M 118
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
+I+ G+ +LHS ++H D+ N+L + +++FGL + P E
Sbjct: 119 HQIIT-----GMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGL-ATQLKMPHE--KHY 170
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVK 1051
T G+ Y+SPE A+ E+DV+S G + +L GR P D D VK
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF----DTDTVK 218
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIR-RLRDGTIDENT-------FRKEAEAL-GKVKHRNLT 895
L +G +G++++ + +D + R+ T++E+ F EA + G H +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ----EASHQDGHVLNWPMRHLISLG--LAR 949
+L G P L+V + M +G+L + L+ EA + G ++ +I + +A
Sbjct: 82 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIAD 138
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
G+++L++ VH D+ +N + DF + +FG+ R I + + +++
Sbjct: 139 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-DIXETDXXRKGGKGLLPVRWMA 197
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
PE+ G T +D++SFG+VL EI + +P +E ++K+V
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 242
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRD---GTIDENTFRKEAEA---LGK 888
T +F E + G +G +FK + DG + +I+R + G++DE +E A LG+
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVY-DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL 947
H V+R + A D +L+ +Y G+LA + E + ++ L+ L +
Sbjct: 66 HSH----VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL-LQV 120
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLF 971
RGL ++HS+ +VH DIKP N+
Sbjct: 121 GRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIR-RLRDGTIDENT-------FRKEAEAL-GKVKHRNLT 895
L +G +G++++ + +D + R+ T++E+ F EA + G H +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ----EASHQDGHVLNWPMRHLISLG--LAR 949
+L G P L+V + M +G+L + L+ EA + G ++ +I + +A
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIAD 141
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
G+++L++ VH D+ +N + DF + +FG+ R I + + +++
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-DIXETDXXRKGGKGLLPVRWMA 200
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
PE+ G T +D++SFG+VL EI + +P +E ++K+V
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With A Bisubstrate Inhibitor
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIR-RLRDGTIDENT-------FRKEAEAL-GKVKHRNLT 895
L +G +G++++ + +D + R+ T++E+ F EA + G H +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ----EASHQDGHVLNWPMRHLISLG--LAR 949
+L G P L+V + M +G+L + L+ EA + G ++ +I + +A
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIAD 141
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
G+++L++ VH D+ +N + DF + +FG+ R I + + +++
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-DIXETDXXRKGGKGLLPVRWMA 200
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
PE+ G T +D++SFG+VL EI + +P +E ++K+V
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 109/228 (47%), Gaps = 33/228 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFR----KEAEALGKVKHRN 893
F +++L G YG++ A+++ G +++I+++ D+ F +E + L KH N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHEN 70
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH-VLNWPM------RHLISLG 946
+ + + D N N ++QE D H V++ M ++ I
Sbjct: 71 IITI---------FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSS-------T 999
L R + LH +++H D+KP N+L +++ + + +FGL R+ + A+ S T
Sbjct: 122 L-RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 1000 TPIGSLGYVSPEAA-STGQPTKEADVYSFGIVLLEILTGRKPVMFTQD 1046
+ + Y +PE ++ + ++ DV+S G +L E+ R+P+ +D
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRD 227
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 109/228 (47%), Gaps = 33/228 (14%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFR----KEAEALGKVKHRN 893
F +++L G YG++ A+++ G +++I+++ D+ F +E + L KH N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHEN 70
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH-VLNWPM------RHLISLG 946
+ + + D N N ++QE D H V++ M ++ I
Sbjct: 71 IITI---------FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP----- 1001
L R + LH +++H D+KP N+L +++ + + +FGL R+ + A+ S T
Sbjct: 122 L-RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 1002 --IGSLGYVSPEAA-STGQPTKEADVYSFGIVLLEILTGRKPVMFTQD 1046
+ + Y +PE ++ + ++ DV+S G +L E+ R+P+ +D
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRD 227
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 73 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 122
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 123 IAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 180
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 181 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L +H N+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGINDI 91
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 92 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 144
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 870 RDGTIDENTFR---KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQE 926
+ ++ N R KE + + ++H L L + D+ +V D + G+L LQ+
Sbjct: 50 KQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM-FMVVDLLLGGDLRYHLQQ 108
Query: 927 ASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR 986
H + L L L +L + ++H D+KP N+L D H+++F
Sbjct: 109 NVHFKEETVK-----LFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFN--- 160
Query: 987 LAIATPAEASSSTTPIGSLGYVSPEAASTGQ---PTKEADVYSFGIVLLEILTGRKP 1040
+A P E + TT G+ Y++PE S+ + + D +S G+ E+L GR+P
Sbjct: 161 IAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 34/218 (15%)
Query: 842 ENVLSRGRYGLIFKASYQ-DGMVL--SIRRLRD--GTIDENTFRKEAEALGKVKHR-NLT 895
++V+ G +G + KA + DG+ + +I+R+++ D F E E L K+ H N+
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 896 VL------RGYYAGPPDVRLLVYDYMPNGNLATLLQEA-----------SHQDGHVLNWP 938
L RGY L +Y P+GNL L+++ ++ L+
Sbjct: 90 NLLGACEHRGYL-------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 939 MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSS 998
+ +ARG+ +L +H D+ +N+L ++ A +++FGL R + +
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-GQEVYVKKTMG 201
Query: 999 TTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
P+ +++ E+ + T +DV+S+G++L EI++
Sbjct: 202 RLPV---RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine
At 2a Resolution
Length = 345
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 844 VLSRGRYGLIFKASYQD-GMVLSIRRLR------DGTIDENTFRKEAEALGKVKHRNLTV 896
+L +G +G +F A ++ +I+ L+ D ++ K +L +H LT
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTH 82
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
+ + ++ V +Y+ G+L +Q H + + + GL FLHS
Sbjct: 83 MFCTFQTKENL-FFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHS 136
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+V+ D+K N+L D D +++FG+ + + A+ + G+ Y++PE
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC---GTPDYIAPEILLGQ 193
Query: 1017 QPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D +SFG++L E+L G+ P QDE+
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSP-FHGQDEE 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 844 VLSRGRYGLIFKA----SYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRG 899
+L +G +G + K + Q+ V I + D +T +E E L K+ H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 900 YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDM 959
+V + G L + + H ++ + S G++++H ++
Sbjct: 89 ILEDSSSF-YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS-----GITYMHKHNI 142
Query: 960 VHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
VH D+KP+N+L ++ D + + +FGL + + IG+ Y++PE G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGTAYYIAPEVLR-G 197
Query: 1017 QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVK 1054
++ DV+S G++L +L+G P + DI+K V+
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 844 VLSRGRYGLIFKA----SYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRG 899
+L +G +G + K + Q+ V I + D +T +E E L K+ H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 900 YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDM 959
+V + G L + + H ++ + S G++++H ++
Sbjct: 89 ILEDSSSF-YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS-----GITYMHKHNI 142
Query: 960 VHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
VH D+KP+N+L ++ D + + +FGL + + IG+ Y++PE G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGTAYYIAPEVLR-G 197
Query: 1017 QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVK 1054
++ DV+S G++L +L+G P + DI+K V+
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEAS-----HQDGHVLNWPMRHLI--SLGLA 948
L G P +++ ++ GNL+T L+ ++D + + HLI S +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+G+ FL S +H D+ +N+L + +FGL R P + L ++
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWM 213
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILT 1036
+PE T ++DV+SFG++L EI +
Sbjct: 214 APETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of Triazine
Derivatives As Potent, Selective Tie-2 Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent 2-(Pyridin-2-Yl)-
1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 34/218 (15%)
Query: 842 ENVLSRGRYGLIFKASYQ-DGMVL--SIRRLRD--GTIDENTFRKEAEALGKVKHR-NLT 895
++V+ G +G + KA + DG+ + +I+R+++ D F E E L K+ H N+
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 896 VL------RGYYAGPPDVRLLVYDYMPNGNLATLLQEA-----------SHQDGHVLNWP 938
L RGY L +Y P+GNL L+++ ++ L+
Sbjct: 80 NLLGACEHRGYL-------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 939 MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSS 998
+ +ARG+ +L +H D+ +N+L ++ A +++FGL R + +
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-GQEVYVKKTMG 191
Query: 999 TTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
P+ +++ E+ + T +DV+S+G++L EI++
Sbjct: 192 RLPV---RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 910 LVYDYMPNGNLATLLQEASHQDG--HVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
LV MP G L ++E + G +LNW M+ +A+G+S+L + +VH D+ +
Sbjct: 95 LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLEDVRLVHRDLAAR 148
Query: 968 NVLFDADFEAHLSEFGLDRL--AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVY 1025
NVL + +++FGL RL T A PI +++ E+ + T ++DV+
Sbjct: 149 NVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPI---KWMALESILRRRFTHQSDVW 205
Query: 1026 SFGIVLLEILT-GRKP 1040
S+G+ + E++T G KP
Sbjct: 206 SYGVTVWELMTFGAKP 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I LR+ T + EA + V
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 110 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 159
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FGL +L A E A PI
Sbjct: 160 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-- 217
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 218 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation And
Specifity Of A Ste20p Map3k
Length = 348
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 30/220 (13%)
Query: 839 FDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTIDENT----FRKEAEALGKVKHRN 893
F + + G +G ++ A ++ V++I+++ N KE L K++H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL----ISLGLAR 949
RG Y LV +Y G+ + LL+ V P++ + ++ G +
Sbjct: 116 TIQYRGCYLRE-HTAWLVMEYCL-GSASDLLE--------VHKKPLQEVEIAAVTHGALQ 165
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
GL++LHS +M+H D+K N+L L +FG +I PA +G+ +++
Sbjct: 166 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG--SASIMAPANXF-----VGTPYWMA 218
Query: 1010 PE---AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQD 1046
PE A GQ + DV+S GI +E L RKP +F +
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMN 257
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human
Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 110/227 (48%), Gaps = 24/227 (10%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIR-RLRDGTIDENT-------FRKEAEAL-GKVKHRNLT 895
L +G +G++++ + +D + R+ T++E+ F EA + G H +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ----EASHQDGHVLNWPMRHLISLG--LAR 949
+L G P L+V + M +G+L + L+ EA + G ++ +I + +A
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIAD 141
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP--AEASSSTTPIGSLGY 1007
G+++L++ VH D+ +N + DF + +FG+ R T + P+ +
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV---RW 198
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
++PE+ G T +D++SFG+VL EI + +P +E ++K+V
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 110/227 (48%), Gaps = 24/227 (10%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIR-RLRDGTIDENT-------FRKEAEAL-GKVKHRNLT 895
L +G +G++++ + +D + R+ T++E+ F EA + G H +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ----EASHQDGHVLNWPMRHLISLG--LAR 949
+L G P L+V + M +G+L + L+ EA + G ++ +I + +A
Sbjct: 84 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIAD 140
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP--AEASSSTTPIGSLGY 1007
G+++L++ VH D+ +N + DF + +FG+ R T + P+ +
Sbjct: 141 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV---RW 197
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
++PE+ G T +D++SFG+VL EI + +P +E ++K+V
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 244
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 30/220 (13%)
Query: 839 FDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTIDENT----FRKEAEALGKVKHRN 893
F + + G +G ++ A ++ V++I+++ N KE L K++H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHL----ISLGLAR 949
RG Y LV +Y G+ + LL+ V P++ + ++ G +
Sbjct: 77 TIQYRGCYLRE-HTAWLVMEYCL-GSASDLLE--------VHKKPLQEVEIAAVTHGALQ 126
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
GL++LHS +M+H D+K N+L L +FG +I PA +G+ +++
Sbjct: 127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG--SASIMAPANXF-----VGTPYWMA 179
Query: 1010 PE---AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQD 1046
PE A GQ + DV+S GI +E L RKP +F +
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMN 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKXQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 41/233 (17%)
Query: 842 ENVLSRGRYGLIF----KASYQDGMV--LSIRRLRDGTIDENTFRKEAEALGKVKHRNLT 895
+ VL +G +G + K + Q+ V +S R+++ T D+ + +E + L ++ H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLREVQLLKQLDHPNIM 89
Query: 896 VL------RGYYAGPPDVRLLVYDYMPNGNLATLL---QEASHQDGHVLNWPMRHLISLG 946
L +GY+ LV + G L + + S D + +R ++S
Sbjct: 90 KLYEFFEDKGYF-------YLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLS-- 137
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSS-TTPI 1002
G++++H +VH D+KP+N+L ++ D + +FGL +T EAS I
Sbjct: 138 ---GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEASKKMKDKI 189
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
G+ Y++PE G ++ DV+S G++L +L+G P + DI+K V+K
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK 241
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 41/237 (17%)
Query: 838 QFDEENVLSRGRYGLIF----KASYQDGMV--LSIRRLRDGTIDENTFRKEAEALGKVKH 891
++ + VL +G +G + K + Q+ V +S R+++ T D+ + +E + L ++ H
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLREVQLLKQLDH 109
Query: 892 RNLTVL------RGYYAGPPDVRLLVYDYMPNGNLATLL---QEASHQDGHVLNWPMRHL 942
N+ L +GY+ LV + G L + + S D + +R +
Sbjct: 110 PNIMKLYEFFEDKGYF-------YLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQV 159
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSS- 998
+S G++++H +VH D+KP+N+L ++ D + +FGL +T EAS
Sbjct: 160 LS-----GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEASKKM 209
Query: 999 TTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
IG+ Y++PE G ++ DV+S G++L +L+G P + DI+K V+K
Sbjct: 210 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK 265
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKXQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQDGMV-LSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A V ++I+++ T + T R E + L +H N+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGINDI 91
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 92 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 144
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A T + + Y +PE
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQ-DGMVLSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A + + ++I+++ T + T R E + L + +H N+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 146
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A + + Y +PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 100/231 (43%), Gaps = 16/231 (6%)
Query: 830 VETLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG-TIDENTFRKEAEALG 887
++T + F VL G + +F + G + +++ ++ +++ E L
Sbjct: 2 MQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLK 61
Query: 888 KVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL 947
K+KH N+ L Y LV + G L + E V L+ +
Sbjct: 62 KIKHENIVTLEDIYESTTHY-YLVMQLVSGGELFDRILERG-----VYTEKDASLVIQQV 115
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+ +LH +VH D+KP+N+L+ + + + +++FGL ++ + +T G+
Sbjct: 116 LSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME-----QNGIMSTACGT 170
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
GYV+PE + +K D +S G++ +L G P + + + +K+
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE 221
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 845 LSRGRYGLIFKASYQ-DGMVLSIRRL---RDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
+ G YG++ A + + ++I+++ T + T R E + L + +H N+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 94
Query: 901 YAGPPDVRL----LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
P ++ +V D M +L LL+ + H+ + + + RGL ++HS
Sbjct: 95 IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQ------ILRGLKYIHS 147
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+++H D+KP N+L + + + +FGL R+A + + Y +PE
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 1017 Q-PTKEADVYSFGIVLLEILTGR 1038
+ TK D++S G +L E+L+ R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGXVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic
Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution
Length = 336
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 40/221 (18%)
Query: 844 VLSRGRYGLIFKASYQDG----MVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLT-VLR 898
++ RGRYG ++K S + V S ++ ++N +R + ++H N+ +
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYR-----VPLMEHDNIARFIV 74
Query: 899 GYYAGPPDVR---LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G D R LLV +Y PNG+L L H +W ++ + RGL++LH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLS------LHTSDWVSSCRLAHSVTRGLAYLH 128
Query: 956 SL---------DMVHGDIKPQNVLFDADFEAHLSEFGLD-RLA---IATPAEA-SSSTTP 1001
+ + H D+ +NVL D +S+FGL RL + P E +++ +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 1002 IGSLGYVSPEA-------ASTGQPTKEADVYSFGIVLLEIL 1035
+G++ Y++PE K+ D+Y+ G++ EI
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 41/237 (17%)
Query: 838 QFDEENVLSRGRYGLIF----KASYQDGMV--LSIRRLRDGTIDENTFRKEAEALGKVKH 891
++ + VL +G +G + K + Q+ V +S R+++ T D+ + +E + L ++ H
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLREVQLLKQLDH 108
Query: 892 RNLTVL------RGYYAGPPDVRLLVYDYMPNGNLATLL---QEASHQDGHVLNWPMRHL 942
N+ L +GY+ LV + G L + + S D + +R +
Sbjct: 109 PNIMKLYEFFEDKGYF-------YLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQV 158
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSS- 998
+S G++++H +VH D+KP+N+L ++ D + +FGL +T EAS
Sbjct: 159 LS-----GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEASKKM 208
Query: 999 TTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
IG+ Y++PE G ++ DV+S G++L +L+G P + DI+K V+K
Sbjct: 209 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK 264
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSI--RRLRDGTIDENT-------FRKEAEALGKVKHRNLT 895
L +G +G++++ + G+V R+ T++E F EA + + ++
Sbjct: 18 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 896 VLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVLNWP-MRHLISLG--LAR 949
L G + G P L++ + M G+L + L+ ++ VL P + +I + +A
Sbjct: 77 RLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
G+++L++ VH D+ +N + DF + +FG+ R I + + ++S
Sbjct: 135 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-DIXETDXXRKGGKGLLPVRWMS 193
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
PE+ G T +DV+SFG+VL EI T +P +E ++++V
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 238
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A 1-O-Tolyl-1,2,
3-Triazole-4-Carboxamide
Length = 348
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ A D HV + + RGL ++HS
Sbjct: 89 ARSLEEFNDVYLVTH--LMGADLNNIVKCAKLTDDHV------QFLIYQILRGLKYIHSA 140
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 80 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 129
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FG +L A E A PI
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-- 187
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 188 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNAM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 843 NVLSRGRYGLIFKASYQDGMV-LSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRG-- 899
V +RGR+G ++KA + V + I ++D +N + E +L +KH N+ G
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAE 87
Query: 900 YYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL- 957
DV L L+ + G+L+ L+ +V++W I+ +ARGL++LH
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLK------ANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 958 ---------DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+ H DIK +NVL + A +++FGL L A + +G+ Y+
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL-ALKFEAGKSAGDTHGQVGTRRYM 200
Query: 1009 SPEAASTG-QPTKEA----DVYSFGIVLLEI 1034
+PE ++A D+Y+ G+VL E+
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated
Protein Kinase Alpha-2 Subunit Mutant (T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 880 RKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPM 939
++E + L +H ++ L + P D +V +Y+ G L + + G V
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDF-FMVMEYVSGGELFDYIC----KHGRVEEMEA 113
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
R L L+ + + H +VH D+KP+NVL DA A +++FGL + ++
Sbjct: 114 RRLFQQILS-AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLR 168
Query: 1000 TPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
GS Y +PE S E D++S G++L +L G P DE + KK
Sbjct: 169 DSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF---DDEHVPTLFKK 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor And
3- Cyanoquinoline Inhibitor
Length = 308
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
Query: 845 LSRGRYGLIFKASYQDGMVLSI--RRLRDGTIDENT-------FRKEAEALGKVKHRNLT 895
L +G +G++++ + G+V R+ T++E F EA + + ++
Sbjct: 27 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 896 VLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVLNWP-MRHLISLG--LAR 949
L G + G P L++ + M G+L + L+ ++ VL P + +I + +A
Sbjct: 86 RLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
G+++L++ VH D+ +N + DF + +FG+ R T + + ++S
Sbjct: 144 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWMS 202
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
PE+ G T +DV+SFG+VL EI T +P +E ++++V
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 78 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 127
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FG +L A E A PI
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-- 185
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 186 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor
Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQN 968
L++ + M G L + +QE Q I + + FLHS ++ H D+KP+N
Sbjct: 102 LIIMECMEGGELFSRIQERGDQ---AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 969 VLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVY 1025
+L+ + D L++FG A ++ TP + YV+PE + K D++
Sbjct: 159 LLYTSKEKDAVLKLTDFGF-----AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 213
Query: 1026 SFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
S G+++ +L G P + I +K++++ GQ
Sbjct: 214 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 249
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEAS-----HQDGHVLNWPMRHLI--SLGLA 948
L G P +++ ++ GNL+T L+ ++D + + HLI S +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+G+ FL S +H D+ +N+L + +FGL R P + L ++
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL-PLKWM 213
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILT 1036
+PE T ++DV+SFG++L EI +
Sbjct: 214 APETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPMRHLI--S 944
L G P +++ ++ GNL+T L+ + + +D + + HLI S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+A+G+ FL S +H D+ +N+L + +FGL R P +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL-P 213
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
L +++PE T ++DV+SFG++L EI +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 78 NPHVCRLLGICLT--STVQLIMQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 127
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FG +L A E A PI
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-- 185
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 186 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent Biochemical
And Cell- Based Activity Throughout The Series
Length = 317
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQN 968
L++ + M G L + +QE Q I + + FLHS ++ H D+KP+N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQ---AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 139
Query: 969 VLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVY 1025
+L+ + D L++FG A ++ TP + YV+PE + K D++
Sbjct: 140 LLYTSKEKDAVLKLTDFGF-----AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 194
Query: 1026 SFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
S G+++ +L G P + I +K++++ GQ
Sbjct: 195 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 230
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 15/216 (6%)
Query: 844 VLSRGRYGLIFKASYQD-GMVLSIRRLRDGTI----DENTFRKEAEALGKVK-HRNLTVL 897
VL +G +G + A ++ G + +++ L+ I D E L + H LT L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
+ P D V +++ G+L +Q++ D + +IS L FLH
Sbjct: 90 FCCFQTP-DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIIS-----ALMFLHDK 143
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ 1017
+++ D+K NVL D + L++FG+ + I ++ T G+ Y++PE
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN---GVTTATFCGTPDYIAPEILQEML 200
Query: 1018 PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWV 1053
D ++ G++L E+L G P ++D+ + +
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 132/315 (41%), Gaps = 47/315 (14%)
Query: 166 SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL 225
S+ L+L + F+ F +QLQ ++L+ G +P+ + L L+ L L NH
Sbjct: 252 SVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHF 310
Query: 226 YGTLPSAISNCSSLVHLSAEDNVLK-GLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCN 284
+ +N SL HL NV K L G + ++ LQ L LS N+ + S C+
Sbjct: 311 DQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHND----IEASDCCS 366
Query: 285 L-WGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPS---------- 333
L N+S L+ + L N G+ C LE+LDL R+ P
Sbjct: 367 LQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQ-LELLDLAFTRLHINAPQSPFQNLHFLQ 425
Query: 334 ---------------WLTNVTSLRVMDLSGNFFSG------NLPAAVGSLDKLEVLRVAN 372
L + LR ++L GN F NL VGS LEVL +++
Sbjct: 426 VLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGS---LEVLILSS 482
Query: 373 NSLSGLVPDEIAKCSLLQM--FDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLS 430
L L D+ A SL +M DL N + L ++G+ + +L N + + P
Sbjct: 483 CGL--LSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKGIYL-NLAANSINIISPRL 539
Query: 431 FGNLSQLETLNLSEN 445
LSQ T+NLS N
Sbjct: 540 LPILSQQSTINLSHN 554
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 118/326 (36%), Gaps = 41/326 (12%)
Query: 311 GRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRV 370
G C +E L+LQ +R + + T L+ +DL+ G LP+ + L+ L+ L +
Sbjct: 247 GLCEMSVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVL 305
Query: 371 ANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQV-PAFLGGIRGLKIVSLGRNMF--SGLI 427
+ N L A L + GN + L + L+ + L N S
Sbjct: 306 SVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCC 365
Query: 428 PLSFGNLSQLETLNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXX 487
L NLS L+TLNLS N+ G + + + P
Sbjct: 366 SLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQ 425
Query: 488 XXXSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPI--------------------EL 527
F LD SNQ+L LP+ L
Sbjct: 426 VLNLTYCF----------------LDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLL 469
Query: 528 FGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLS 587
+ SL+V+ L L + F SL + +++LS N+ T D + L+ ++L+L+
Sbjct: 470 QTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKG-IYLNLA 528
Query: 588 HNQISGMIPAELGACSALEVLELRSN 613
N I+ + P L S + L N
Sbjct: 529 ANSINIISPRLLPILSQQSTINLSHN 554
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino Quinoline
Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 89
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 90 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 141
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
GL LH +V+ D+KP+N+L D +S+ GL A+ P E + +G++GY++
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL---AVHVP-EGQTIKGRVGTVGYMA 353
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVK 1051
PE + T D ++ G +L E++ G+ P F Q + +K
Sbjct: 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSP--FQQRKKKIK 393
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 76 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 125
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FG +L A E A PI
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-- 183
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST-TPIGSLGYVSPEAASTGQPT 1019
H D+KP+N+L AD A+L +FG+ A AT E + +G+L Y +PE S T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGI---ASATTDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 1020 KEADVYSFGIVLLEILTGRKP 1040
AD+Y+ VL E LTG P
Sbjct: 214 YRADIYALTCVLYECLTGSPP 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In
Complex With Amp
Length = 576
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
GL LH +V+ D+KP+N+L D +S+ GL A+ P E + +G++GY++
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL---AVHVP-EGQTIKGRVGTVGYMA 353
Query: 1010 PEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVK 1051
PE + T D ++ G +L E++ G+ P F Q + +K
Sbjct: 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSP--FQQRKKKIK 393
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 89 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 140
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 89
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 90 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 141
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPMRHLI--S 944
L G P +++ ++ GNL+T L+ + + +D + + HLI S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+A+G+ FL S +H D+ +N+L + +FGL R P +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL-P 213
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
L +++PE T ++DV+SFG++L EI +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 83 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 132
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FG +L A E A PI
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-- 190
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 191 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 99
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 100 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 151
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 205
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 104
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 105 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 156
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 104
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 105 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 156
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 66/263 (25%)
Query: 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLR--DGTIDENTFRKEAEALGKVKHRNLT 895
F+ + RG +G++F+A + D +I+R+R + + +E +AL K++H +
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 896 -VLRGYYAGPPD------------------------------VRLLVYDYMPNGNLATLL 924
+ PP+ V++ D N L
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127
Query: 925 QEASHQ-----------DGHVLNWPMRHL------------ISLGLARGLSFLHSLDMVH 961
Q +S + ++ +W R I + +A + FLHS ++H
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMH 187
Query: 962 GDIKPQNVLFDADFEAHLSEFGL--------DRLAIATPAEA-SSSTTPIGSLGYVSPEA 1012
D+KP N+ F D + +FGL + + TP A ++ +G+ Y+SPE
Sbjct: 188 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQ 247
Query: 1013 ASTGQPTKEADVYSFGIVLLEIL 1035
+ + D++S G++L E+L
Sbjct: 248 IHGNNYSHKVDIFSLGLILFELL 270
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQ--------DGHVLNWPMRHLI--SL 945
L G P +++ ++ GNL+T L+ ++ D + + HLI S
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
+A+G+ FL S +H D+ +N+L + +FGL R P + L
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL-PL 214
Query: 1006 GYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+++PE T ++DV+SFG++L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 104
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 105 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 156
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPMRHLI--S 944
L G P +++ ++ GNL+T L+ + + +D + + HLI S
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+A+G+ FL S +H D+ +N+L + +FGL R P +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL-P 204
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
L +++PE T ++DV+SFG++L EI +
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 97
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 98 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 149
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPMRHLI--S 944
L G P +++ ++ GNL+T L+ + + +D + + HLI S
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+A+G+ FL S +H D+ +N+L + +FGL R P +
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-P 250
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
L +++PE T ++DV+SFG++L EI +
Sbjct: 251 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 94
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 95 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 146
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With A
Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKSQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLCR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+ F +E A+ + HRNL L G PP +V + P G+L L++ HQ +L
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRK--HQGHFLLG 121
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
R+ + + A G+ +L S +H D+ +N+L + +FGL R
Sbjct: 122 TLSRYAVQV--AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ +PE+ T + +D + FG+ L E+ T G++P + I+ + K
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
Query: 1056 QLQR 1059
+ +R
Sbjct: 240 EGER 243
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+ F +E A+ + HRNL L G PP +V + P G+L L++ HQ +L
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRK--HQGHFLLG 111
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
R+ + + A G+ +L S +H D+ +N+L + +FGL R
Sbjct: 112 TLSRYAVQV--AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ +PE+ T + +D + FG+ L E+ T G++P + I+ + K
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
Query: 1056 QLQR 1059
+ +R
Sbjct: 230 EGER 233
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPMRHLI--S 944
L G P +++ ++ GNL+T L+ + + +D + + HLI S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+A+G+ FL S +H D+ +N+L + +FGL R P +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-P 213
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
L +++PE T ++DV+SFG++L EI +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain
(2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVL 935
F EA + + ++ L G + G P L++ + M G+L + L+ ++ VL
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 936 NWP-MRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
P + +I + +A G+++L++ VH D+ +N + DF + +FG+ R T
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
Query: 993 --AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
+ P+ ++SPE+ G T +DV+SFG+VL EI T +P +E +
Sbjct: 215 YYRKGGKGLLPVR---WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 271
Query: 1050 VKWV 1053
+++V
Sbjct: 272 LRFV 275
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 31 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 90
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 91 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 142
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 143 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 196
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGR 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydropyrido-
Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 98
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 99 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 150
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2-
Carboxamide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 103
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 104 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 155
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTIDE--NTFRKEAEALGKVK 890
+F + VL G +G ++K + + + ++I+ LR+ T + EA + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 891 HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDG----HVLNWPMRHLISLG 946
+ ++ L G L+ MP G L ++E H+D ++LNW +
Sbjct: 78 NPHVCRLLGICLT--STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNW------CVQ 127
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTTPIGS 1004
+A+G+++L +VH D+ +NVL +++FG +L A E A PI
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-- 185
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
+++ E+ T ++DV+S+G+ + E++T G KP
Sbjct: 186 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 97
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 98 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 149
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 97
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 98 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 149
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule
Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 32 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 91
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 92 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 143
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 197
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGR 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 97
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 98 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 149
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine
8
Length = 301
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVL 935
F EA + + ++ L G + G P L++ + M G+L + L+ ++ VL
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 936 NWP-MRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
P + +I + +A G+++L++ VH D+ +N + DF + +FG+ R T
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 993 --AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
+ P+ ++SPE+ G T +DV+SFG+VL EI T +P +E +
Sbjct: 180 YYRKGGKGLLPVR---WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 236
Query: 1050 VKWV 1053
+++V
Sbjct: 237 LRFV 240
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 103
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 104 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 155
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 94
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 95 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 146
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+ F +E A+ + HRNL L G PP +V + P G+L L++ HQ +L
Sbjct: 60 DDFIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRK--HQGHFLLG 115
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
R+ + + A G+ +L S +H D+ +N+L + +FGL R
Sbjct: 116 TLSRYAVQV--AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ +PE+ T + +D + FG+ L E+ T G++P + I+ + K
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
Query: 1056 QLQR 1059
+ +R
Sbjct: 234 EGER 237
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+ F +E A+ + HRNL L G PP +V + P G+L L++ HQ +L
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRK--HQGHFLLG 111
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
R+ + + A G+ +L S +H D+ +N+L + +FGL R
Sbjct: 112 TLSRYAVQV--AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ +PE+ T + +D + FG+ L E+ T G++P + I+ + K
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
Query: 1056 QLQR 1059
+ +R
Sbjct: 230 EGER 233
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 94
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 95 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 146
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3
Domain
Length = 341
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+ F +E A+ + HRNL L G PP +V + P G+L L++ HQ +L
Sbjct: 60 DDFIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRK--HQGHFLLG 115
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
R+ + + A G+ +L S +H D+ +N+L + +FGL R
Sbjct: 116 TLSRYAVQV--AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ +PE+ T + +D + FG+ L E+ T G++P + I+ + K
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
Query: 1056 QLQR 1059
+ +R
Sbjct: 234 EGER 237
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide Substituted
Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPMRHLI--S 944
L G P +++ ++ GNL+T L+ + + +D + + HLI S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+A+G+ FL S +H D+ +N+L + +FGL R P +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL-P 204
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
L +++PE T ++DV+SFG++L EI +
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 53 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 112
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 113 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 164
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 218
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 115
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 116 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 167
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 221
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQ-------DGHVLNWPMRHLI--SLG 946
L G P +++ ++ GNL+T L+ ++ D + + HLI S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+A+G+ FL S +H D+ +N+L + +FGL R P + L
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL-PLK 215
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+++PE T ++DV+SFG++L EI +
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 52 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 111
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 112 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 163
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGR 239
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With
An Hydantoin Inhibitor
Length = 305
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVL 935
F EA + + ++ L G + G P L++ + M G+L + L+ ++ VL
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 936 NWP-MRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
P + +I + +A G+++L++ VH D+ +N + DF + +FG+ R T
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 993 --AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
+ P+ ++SPE+ G T +DV+SFG+VL EI T +P +E +
Sbjct: 184 YYRKGGKGLLPVR---WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 240
Query: 1050 VKWV 1053
+++V
Sbjct: 241 LRFV 244
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 845 LSRGRYGLIFKASYQDGMVLSI--RRLRDGTIDENT-------FRKEAEALGKVKHRNLT 895
L +G +G++++ + G+V R+ T++E F EA + + ++
Sbjct: 26 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 896 VLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVLNWP-MRHLISLG--LAR 949
L G + G P L++ + M G+L + L+ ++ VL P + +I + +A
Sbjct: 85 RLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP--AEASSSTTPIGSLGY 1007
G+++L++ VH D+ +N + DF + +FG+ R T + P+ +
Sbjct: 143 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---W 199
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
+SPE+ G T +DV+SFG+VL EI T +P +E ++++V
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRL 909
I K ++ + ++++ L+D +++ E E + + KH+N+ L G + +
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118
Query: 910 LVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHSLD 958
+V +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 119 IV-EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 959 MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQP 1018
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDXXKKTTNGRLPVKWMAPEALFDRVY 236
Query: 1019 TKEADVYSFGIVLLEILT 1036
T ++DV+SFG+++ EI T
Sbjct: 237 THQSDVWSFGVLMWEIFT 254
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 17/185 (9%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQ--DG 932
D+ T RKE + + ++H L L + ++ +++Y++M G L + + ++ +
Sbjct: 197 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM-VMIYEFMSGGELFEKVADEHNKMSED 255
Query: 933 HVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF--EAHLSEFGLDRLAIA 990
+ + MR + +GL +H + VH D+KP+N++F E L +FGL A
Sbjct: 256 EAVEY-MRQV-----CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHL 307
Query: 991 TPAEASSSTTPIGSLGYVSPEAASTGQPT-KEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
P ++ TT G+ + +PE A G+P D++S G++ +L+G P D++
Sbjct: 308 DPKQSVKVTT--GTAEFAAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 364
Query: 1050 VKWVK 1054
++ VK
Sbjct: 365 LRNVK 369
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +++ G L ++ + + + L + R LS+LH+ ++H DIK ++
Sbjct: 119 VVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLHNQGVIHRDIKSDSI 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L +D LS+FG E +G+ +++PE S E D++S GI
Sbjct: 173 LLTSDGRIKLSDFG---FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGI 229
Query: 1030 VLLEILTGRKP 1040
+++E++ G P
Sbjct: 230 MVIEMIDGEPP 240
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+ F +E A+ + HRNL L G PP +V + P G+L L++ HQ +L
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRK--HQGHFLLG 121
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
R+ + + A G+ +L S +H D+ +N+L + +FGL R
Sbjct: 122 TLSRYAVQV--AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ +PE+ T + +D + FG+ L E+ T G++P + I+ + K
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
Query: 1056 QLQR 1059
+ +R
Sbjct: 240 EGER 243
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K+ H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 91 DELDFLMEALIISKLNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 147
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 206
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 267 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 309
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 310 ILERIEYCTQDPDVINTALP 329
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVL 935
F EA + + ++ L G + G P L++ + M G+L + L+ ++ VL
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 936 NWP-MRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
P + +I + +A G+++L++ VH D+ +N + DF + +FG+ R T
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
Query: 993 --AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
+ P+ ++SPE+ G T +DV+SFG+VL EI T +P +E +
Sbjct: 187 YYRKGGKGLLPVR---WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 243
Query: 1050 VKWV 1053
+++V
Sbjct: 244 LRFV 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPMRHLI--S 944
L G P +++ ++ GNL+T L+ + + +D + + HLI S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+A+G+ FL S +H D+ +N+L + +FGL R P +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-P 204
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
L +++PE T ++DV+SFG++L EI +
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline Isostere
Inhibitor (34)
Length = 307
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVL 935
F EA + + ++ L G + G P L++ + M G+L + L+ ++ VL
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 936 NWP-MRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
P + +I + +A G+++L++ VH D+ +N + DF + +FG+ R T
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 993 --AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
+ P+ ++SPE+ G T +DV+SFG+VL EI T +P +E +
Sbjct: 186 YYRKGGKGLLPVR---WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 242
Query: 1050 VKWV 1053
+++V
Sbjct: 243 LRFV 246
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 103/218 (47%), Gaps = 34/218 (15%)
Query: 842 ENVLSRGRYGLIFKASYQ-DGMVL--SIRRLRD--GTIDENTFRKEAEALGKVKHR-NLT 895
++V+ G +G + KA + DG+ + +I+R+++ D F E E L K+ H N+
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 896 VL------RGYYAGPPDVRLLVYDYMPNGNLATLLQEA-----------SHQDGHVLNWP 938
L RGY L +Y P+GNL L+++ ++ L+
Sbjct: 87 NLLGACEHRGYL-------YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 939 MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSS 998
+ +ARG+ +L +H ++ +N+L ++ A +++FGL R + +
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR-GQEVYVKKTMG 198
Query: 999 TTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
P+ +++ E+ + T +DV+S+G++L EI++
Sbjct: 199 RLPV---RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K+ H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 77 DELDFLMEALIISKLNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 133
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 192
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 253 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 295
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 296 ILERIEYCTQDPDVINTALP 315
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+ F +E A+ + HRNL L G PP +V + P G+L L++ HQ +L
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRK--HQGHFLLG 111
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
R+ + + A G+ +L S +H D+ +N+L + +FGL R
Sbjct: 112 TLSRYAVQV--AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ +PE+ T + +D + FG+ L E+ T G++P + I+ + K
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
Query: 1056 QLQR 1059
+ +R
Sbjct: 230 EGER 233
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 94
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 95 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 146
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 839 FDEENVLSRGRYGLIFKASY----QDGMVLSIRRLRDGTIDENT-----FRKEAEALGKV 889
F+ VL +G YG +F+ G + +++ L+ I N + E L +V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 890 KHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVL-NWPMRHLISLGL 947
KH + L YA +L L+ +Y+ G L L+ ++G + + +L + +
Sbjct: 79 KHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISM 132
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGY 1007
A L LH +++ D+KP+N++ + L++FGL + +I + + + T G++ Y
Sbjct: 133 A--LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI---HDGTVTHTFCGTIEY 187
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
++PE + D +S G ++ ++LTG P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex With
An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG----TIDENTFRKEAEAL 886
T + +++ + G YG++ A + G ++I+++ + T + T R E + L
Sbjct: 50 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKIL 108
Query: 887 GKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLAT------LLQEASHQDGHV---LNW 937
KH N+ ++ ++ +P G + L++ HQ H L
Sbjct: 109 KHFKHDNIIAIKD----------ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 158
Query: 938 PMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997
L RGL ++HS ++H D+KP N+L + + E + +FG+ R +PAE
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 998 STTP-IGSLGYVSPE-AASTGQPTKEADVYSFGIVLLEILTGRK 1039
T + + Y +PE S + T+ D++S G + E+L R+
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 845 LSRGRYGLIFKASYQDGMVLSI--RRLRDGTIDENT-------FRKEAEALGKVKHRNLT 895
L +G +G++++ + G+V R+ T++E F EA + + ++
Sbjct: 33 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 896 VLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVLNWP-MRHLISLG--LAR 949
L G + G P L++ + M G+L + L+ ++ VL P + +I + +A
Sbjct: 92 RLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP--AEASSSTTPIGSLGY 1007
G+++L++ VH D+ +N + DF + +FG+ R T + P+ +
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---W 206
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
+SPE+ G T +DV+SFG+VL EI T +P +E ++++V
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor Whi-P180
Length = 484
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 41/233 (17%)
Query: 842 ENVLSRGRYGLIF----KASYQDGMV--LSIRRLRDGTIDENTFRKEAEALGKVKHRNLT 895
+ VL +G +G + K + Q+ V +S R+++ T D+ + +E + L ++ H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-DKESLLREVQLLKQLDHPNIX 89
Query: 896 VL------RGYYAGPPDVRLLVYDYMPNGNLATLL---QEASHQDGHVLNWPMRHLISLG 946
L +GY+ LV + G L + + S D + +R ++S
Sbjct: 90 KLYEFFEDKGYF-------YLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLS-- 137
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSSTT-PI 1002
G+++ H +VH D+KP+N+L ++ D + +FGL +T EAS I
Sbjct: 138 ---GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL-----STHFEASKKXKDKI 189
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
G+ Y++PE G ++ DV+S G++L +L+G P + DI+K V+K
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK 241
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein
Kinase And Immunoglobulin Domains
Length = 491
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 17/185 (9%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQ--DG 932
D+ T RKE + + ++H L L + ++ +++Y++M G L + + ++ +
Sbjct: 91 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM-VMIYEFMSGGELFEKVADEHNKMSED 149
Query: 933 HVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF--EAHLSEFGLDRLAIA 990
+ + MR + +GL +H + VH D+KP+N++F E L +FGL A
Sbjct: 150 EAVEY-MRQV-----CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHL 201
Query: 991 TPAEASSSTTPIGSLGYVSPEAASTGQPT-KEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
P ++ TT G+ + +PE A G+P D++S G++ +L+G P D++
Sbjct: 202 DPKQSVKVTT--GTAEFAAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 258
Query: 1050 VKWVK 1054
++ VK
Sbjct: 259 LRNVK 263
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 110/227 (48%), Gaps = 24/227 (10%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIR-RLRDGTIDENT-------FRKEAEAL-GKVKHRNLT 895
L +G +G++++ + +D + R+ T++E+ F EA + G H +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ----EASHQDGHVLNWPMRHLISLG--LAR 949
+L G P L+V + M +G+L + L+ EA + G ++ +I + +A
Sbjct: 85 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIAD 141
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP--AEASSSTTPIGSLGY 1007
G+++L++ VH ++ +N + DF + +FG+ R T + P+ +
Sbjct: 142 GMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV---RW 198
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
++PE+ G T +D++SFG+VL EI + +P +E ++K+V
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 110/227 (48%), Gaps = 24/227 (10%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIR-RLRDGTIDENT-------FRKEAEAL-GKVKHRNLT 895
L +G +G++++ + +D + R+ T++E+ F EA + G H +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ----EASHQDGHVLNWPMRHLISLG--LAR 949
+L G P L+V + M +G+L + L+ EA + G ++ +I + +A
Sbjct: 86 LLGVVSKGQPT--LVVMELMAHGDLKSYLRSLRPEAENNPGRPPP-TLQEMIQMAAEIAD 142
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP--AEASSSTTPIGSLGY 1007
G+++L++ VH ++ +N + DF + +FG+ R T + P+ +
Sbjct: 143 GMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV---RW 199
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
++PE+ G T +D++SFG+VL EI + +P +E ++K+V
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 246
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 98
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 99 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 150
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPMRHLI--S 944
L G P +++ ++ GNL+T L+ + + +D + + HLI S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+A+G+ FL S +H D+ +N+L + +FGL R P +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-P 204
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
L +++PE T ++DV+SFG++L EI +
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 845 LSRGRYGLIFKA------SYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHR-NLT 895
L RG +G + +A ++++ L++G + E + L + H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQ---------EASHQDGHVLNWPMRHLI--S 944
L G P +++ ++ GNL+T L+ + + +D + + HLI S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 945 LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+A+G+ FL S +H D+ +N+L + +FGL R P +
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-P 215
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
L +++PE T ++DV+SFG++L EI +
Sbjct: 216 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILMELMAGGDLKSFLRETRPRPS 132
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 191
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 192 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 252 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 294
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 295 ILERIEYCTQDPDVINTALP 314
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine Based
Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 98
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 99 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 150
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 848 GRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG K + DG +L + L G++ E E L ++KH N+ YY
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---RYYDR 73
Query: 904 PPD----VRLLVYDYMPNGNLATLLQEASHQDGHV-LNWPMRHLISLGLARGLSFLHSLD 958
D +V +Y G+LA+++ + + + ++ + +R + L LA L H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRRS 131
Query: 959 -----MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
++H D+KP NV D L +FGL R+ + S + T +G+ Y+SPE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSFAKTFVGTPYYMSPEQM 188
Query: 1014 STGQPTKEADVYSFGIVLLEILTGRKP-VMFTQDE 1047
+ +++D++S G +L E+ P F+Q E
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 68 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 124
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 125 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 183
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 184 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 243
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 244 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 286
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 287 ILERIEYCTQDPDVINTALP 306
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +E+ E E + + KH+N+ L G GP V
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHS 956
+ +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 119 ---IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILMELMAGGDLKSFLRETRPRPS 147
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 206
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 267 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 309
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 310 ILERIEYCTQDPDVINTALP 329
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
Length = 304
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 15/213 (7%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKA---SYQDGMVLSIRRLRDGTIDENTFRKEAEALGK 888
+L+ F + + +G +G +FK Q + + I L + + ++E L +
Sbjct: 2 SLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 889 VKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL 947
+T G Y D +L ++ +Y+ G+ LL+ + + I +
Sbjct: 62 CDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREI 113
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGY 1007
+GL +LHS +H DIK NVL E L++FG+ T + + T +G+ +
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN---TFVGTPFW 170
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
++PE +AD++S GI +E+ G P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 83 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 139
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 198
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 199 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 258
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 259 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 301
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 302 ILERIEYCTQDPDVINTALP 321
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex
With Crizotinib (Pf-02341066)
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 132
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 191
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 192 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 252 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 294
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 295 ILERIEYCTQDPDVINTALP 314
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 133
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 192
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 253 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 295
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 296 ILERIEYCTQDPDVINTALP 315
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase
In Complex With Ch5424802
Length = 344
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 93 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 149
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 150 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 208
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 209 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 268
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 269 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 311
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 312 ILERIEYCTQDPDVINTALP 331
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIK 965
D V +Y+ G+L +Q+ P + +A GL FL S +++ D+K
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQQVGR-----FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK 469
Query: 966 PQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVY 1025
NV+ D++ +++FG+ + I + ++ G+ Y++PE + K D +
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKENI---WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 526
Query: 1026 SFGIVLLEILTGRKPVMFTQDED 1048
+FG++L E+L G+ P +DED
Sbjct: 527 AFGVLLYEMLAGQAPFE-GEDED 548
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG L+V + + G L + +Q+ Q I + +
Sbjct: 89 RIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 144
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 200
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 253
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 879 FRKEAEALGKVKHRNLTVLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVL 935
F EA + + ++ L G + G P L++ + M G+L + L+ + + VL
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 936 NWP-MRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
P + +I + +A G+++L++ VH D+ +N + DF + +FG+ R T
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 993 --AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049
+ P+ ++SPE+ G T +DV+SFG+VL EI T +P +E +
Sbjct: 183 YYRKGGKGLLPVR---WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 239
Query: 1050 VKWV 1053
+++V
Sbjct: 240 LRFV 243
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 147
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 206
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 207 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 267 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 309
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 310 ILERIEYCTQDPDVINTALP 329
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + ++GL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 14/225 (6%)
Query: 838 QFDEENVLSRGRYGLIFKASYQD-GMVLSIRRL---RDGTIDENTFRKEAEALGKVKHRN 893
++++ + G YG++FK +D G +++I++ D + + +E L ++KH N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
L L + + L V++Y + T+L E V ++ I+ + ++F
Sbjct: 64 LVNLLEVFRRKRRLHL-VFEYCDH----TVLHELDRYQRGVPEHLVKS-ITWQTLQAVNF 117
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE-A 1012
H + +H D+KP+N+L L +FG RL + P++ + + Y SPE
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFARL-LTGPSDYYDDE--VATRWYRSPELL 174
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQL 1057
Q DV++ G V E+L+G D D + ++K L
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 115
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 116 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 167
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T E + + Y +PE +
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGY---VATRWYRAPEIMLNWM 221
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE--NTFRKEAEALGKVKHRNLTVLRGYY 901
+ RG +G +F + D +++++ R+ + F +EA L + H N+ L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDM 959
+ +V + + G+ T L+ +G L ++ L+ + A G+ +L S
Sbjct: 182 TQKQPI-YIVMELVQGGDFLTFLR----TEGARLR--VKTLLQMVGDAAAGMEYLESKCC 234
Query: 960 VHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPT 1019
+H D+ +N L +S+FG+ R AS + + + +PEA + G+ +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV-PVKWTAPEALNYGRYS 293
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
E+DV+SFGI+L E + G P ++ ++V+K
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK 330
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG----TIDENTFRKEAEAL 886
T + +++ + G YG++ A + G ++I+++ + T + T R E + L
Sbjct: 49 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKIL 107
Query: 887 GKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLAT------LLQEASHQDGHV---LNW 937
KH N+ ++ ++ +P G + L++ HQ H L
Sbjct: 108 KHFKHDNIIAIKD----------ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 157
Query: 938 PMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997
L RGL ++HS ++H D+KP N+L + + E + +FG+ R +PAE
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 998 STTP-IGSLGYVSPE-AASTGQPTKEADVYSFGIVLLEILTGRK 1039
T + + Y +PE S + T+ D++S G + E+L R+
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +++ E E + + KH+N+ L G GP V
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYV 118
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHS 956
+ +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 119 ---IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 35/239 (14%)
Query: 842 ENVLSRGRYG-LIFKASYQDGMVLSIRRLR----DGTIDENTFRKEAEALGKVKHRNLTV 896
E +L G G ++F+ S+Q G ++++R+ D + E E++ H N V
Sbjct: 38 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPN--V 89
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFL 954
+R Y + D L + + N NL L++ + D ++ + ISL +A G++ L
Sbjct: 90 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 955 HSLDMVHGDIKPQNVL------FDADFEAH-------LSEFGL-DRLAIATPAEASSSTT 1000
HSL ++H D+KPQN+L F AD + +S+FGL +L +
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 1001 PIGSLGYVSP---EAASTGQPTKEADVYSFGIVLLEILT-GRKPV--MFTQDEDIVKWV 1053
P G+ G+ +P E ++ + T+ D++S G V IL+ G+ P ++++ +I++ +
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 268
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG L+V + + G L + +Q+ Q I + +
Sbjct: 74 RIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 129
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 185
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 238
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 89 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 140
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG L+V + + G L + +Q+ Q I + +
Sbjct: 81 RIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 136
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 192
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 245
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 173
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 174 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 232
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 233 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 292
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 293 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 335
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 336 ILERIEYCTQDPDVINTALP 355
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 845 LSRGRYGLIFKASYQDGMVLSI--RRLRDGTIDENT-------FRKEAEALGKVKHRNLT 895
L +G +G++++ + G+V R+ T++E F EA + + ++
Sbjct: 33 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 896 VLRGYYA-GPPDVRLLVYDYMPNGNLATLLQ--EASHQDGHVLNWP-MRHLISLG--LAR 949
L G + G P L++ + M G+L + L+ + + VL P + +I + +A
Sbjct: 92 RLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP--AEASSSTTPIGSLGY 1007
G+++L++ VH D+ +N + DF + +FG+ R T + P+ +
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---W 206
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
+SPE+ G T +DV+SFG+VL EI T +P +E ++++V
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--R 940
KH+N+ L G + ++V +Y GNL LQ E S+ H + +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 941 HLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAEAS 996
L+S +ARG+ +L S +H D+ +NVL D +++FGL R I + +
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ P+ +++PEA T ++DV+SFG++L EI T G P E++ K +K+
Sbjct: 252 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 308
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking
Site On Its Activator Mkk3b
Length = 360
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG + L+V + + G L + +Q+ Q I + +
Sbjct: 73 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 128
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 184
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 237
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 94 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 150
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 151 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 209
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 210 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 269
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 270 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 312
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 313 ILERIEYCTQDPDVINTALP 332
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Complex
Mapkap Kinase-2 (Mk2)
Length = 324
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG L+V + + G L + +Q+ Q I + +
Sbjct: 79 RIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 134
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 190
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 243
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG + L+V + + G L + +Q+ Q I + +
Sbjct: 119 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 174
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 230
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 283
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 43 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 102
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 103 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 154
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 208
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGR 230
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH AN
Oligonucleotide
Length = 448
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 35/239 (14%)
Query: 842 ENVLSRGRYG-LIFKASYQDGMVLSIRRLR----DGTIDENTFRKEAEALGKVKHRNLTV 896
E +L G G ++F+ S+Q G ++++R+ D + E E++ H N V
Sbjct: 38 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPN--V 89
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFL 954
+R Y + D L + + N NL L++ + D ++ + ISL +A G++ L
Sbjct: 90 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 955 HSLDMVHGDIKPQNVL------FDADFEAH-------LSEFGL-DRLAIATPAEASSSTT 1000
HSL ++H D+KPQN+L F AD + +S+FGL +L +
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 1001 PIGSLGYVSP---EAASTGQPTKEADVYSFGIVLLEILT-GRKPV--MFTQDEDIVKWV 1053
P G+ G+ +P E ++ + T+ D++S G V IL+ G+ P ++++ +I++ +
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 268
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG + L+V + + G L + +Q+ Q I + +
Sbjct: 125 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 180
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 236
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 289
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG L+V + + G L + +Q+ Q I + +
Sbjct: 80 RIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 135
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 191
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 244
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG + L+V + + G L + +Q+ Q I + +
Sbjct: 75 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 130
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 186
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking
Partner
Length = 380
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 112
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 113 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 164
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 218
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 103/210 (49%), Gaps = 16/210 (7%)
Query: 839 FDEENVLSRGRYGLIFKAS-YQDGMVLSIRRLRDGTIDENTFR----KEAEALGKVKHRN 893
F E + RG++ +++A+ DG+ +++++++ + + R KE + L ++ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 894 LTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIS--LGLARG 950
V++ Y + D L +V + G+L+ +++ Q + P R + + L
Sbjct: 94 --VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI---PERTVWKYFVQLCSA 148
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSP 1010
L +HS ++H DIKP NV A L + GL R ++ +++ + +G+ Y+SP
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF---FSSKTTAAHSLVGTPYYMSP 205
Query: 1011 EAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
E ++D++S G +L E+ + P
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 909 LLVYDYMPNGNLATLLQ--EASHQDGHVLNWP-MRHLISLG--LARGLSFLHSLDMVHGD 963
L++ + M G+L + L+ ++ VL P + +I + +A G+++L++ VH D
Sbjct: 91 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 150
Query: 964 IKPQNVLFDADFEAHLSEFGLDRLAIATP--AEASSSTTPIGSLGYVSPEAASTGQPTKE 1021
+ +N DF + +FG+ R T + P+ ++SPE+ G T
Sbjct: 151 LAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMSPESLKDGVFTTY 207
Query: 1022 ADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
+DV+SFG+VL EI T +P +E ++++V
Sbjct: 208 SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 52 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 111
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 112 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 163
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGR 239
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Novel Bosutinib Isoform 1, Previously Thought To Be
Bosutinib
Length = 293
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLTVLRGYYA 902
L G +G ++KA ++ L+ ++ + +E + E E L H + L G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962
+ +++ ++ P G + ++ E L P ++ + L+FLHS ++H
Sbjct: 79 HDGKLWIMI-EFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRIIHR 133
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA--STGQPTK 1020
D+K NVL + + L++FG+ + T + S IG+ +++PE T + T
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF---IGTPYWMAPEVVMCETMKDTP 190
Query: 1021 ---EADVYSFGIVLLEILTGRKP 1040
+AD++S GI L+E+ P
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPP 213
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG + L+V + + G L + +Q+ Q I + +
Sbjct: 75 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 130
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 186
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 103 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 159
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRL 987
+ M L+ + +A G +L +H DI +N L A + +FG+ R
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR- 218
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQD 1046
I + + + ++ PEA G T + D +SFG++L EI + G P +
Sbjct: 219 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 278
Query: 1047 EDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106
++++++V G++ W+ P DRP+ A
Sbjct: 279 QEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNFAI 321
Query: 1107 IVFMLEGCRVGPDMPSSADP 1126
I+ +E C PD+ ++A P
Sbjct: 322 ILERIEYCTQDPDVINTALP 341
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound
To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10 (Lok)
Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLTVLRGYYA 902
L G +G ++KA ++ L+ ++ + +E + E E L H + L G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962
+ +++ ++ P G + ++ E L P ++ + L+FLHS ++H
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRIIHR 141
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA--STGQPTK 1020
D+K NVL + + L++FG+ + T + S IG+ +++PE T + T
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF---IGTPYWMAPEVVMCETMKDTP 198
Query: 1021 ---EADVYSFGIVLLEILTGRKP 1040
+AD++S GI L+E+ P
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPP 221
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A 2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ L P + G +LH ++H D+K N+ + D E + +FGL A
Sbjct: 108 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL---A 164
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ T G+ Y++PE S + E DV+S G ++ +L G+ P
Sbjct: 165 TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--R 940
KH+N+ L G + ++V +Y GNL LQ E S+ H + +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 941 HLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAEAS 996
L+S +ARG+ +L S +H D+ +NVL D +++FGL R I + +
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ P+ +++PEA T ++DV+SFG++L EI T G P E++ K +K+
Sbjct: 211 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + FGL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--R 940
KH+N+ L G + ++V +Y GNL LQ E S+ H + +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 941 HLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAEAS 996
L+S +ARG+ +L S +H D+ +NVL D +++FGL R I + +
Sbjct: 144 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ P+ +++PEA T ++DV+SFG++L EI T G P E++ K +K+
Sbjct: 204 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 260
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ L P + G +LH ++H D+K N+ + D E + +FGL A
Sbjct: 108 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL---A 164
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ T G+ Y++PE S + E DV+S G ++ +L G+ P
Sbjct: 165 TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 27/203 (13%)
Query: 848 GRYGLIFKASY--QDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYA 902
G YG + +SY + G+ +++++L I +E L +KH N+ L +
Sbjct: 62 GAYGSVC-SSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 120
Query: 903 GPP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 121 PATSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHS 172
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-ST 1015
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHT------DDEMTGYVATRWYRAPEIMLNW 226
Query: 1016 GQPTKEADVYSFGIVLLEILTGR 1038
D++S G ++ E+LTGR
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--R 940
KH+N+ L G + ++V +Y GNL LQ E S+ H + +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 941 HLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAEAS 996
L+S +ARG+ +L S +H D+ +NVL D +++FGL R I + +
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ P+ +++PEA T ++DV+SFG++L EI T G P E++ K +K+
Sbjct: 211 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE--NTFRKEAEALGKVKHRNLTVLRGYY 901
+ RG +G +F + D +++++ R+ + F +EA L + H N+ L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDM 959
+ +V + + G+ T L+ +G L ++ L+ + A G+ +L S
Sbjct: 182 TQKQPI-YIVMELVQGGDFLTFLR----TEGARLR--VKTLLQMVGDAAAGMEYLESKCC 234
Query: 960 VHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPT 1019
+H D+ +N L +S+FG+ R AS + + + +PEA + G+ +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV-PVKWTAPEALNYGRYS 293
Query: 1020 KEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
E+DV+SFGI+L E + G P ++ ++V+K
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK 330
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--R 940
KH+N+ L G + ++V +Y GNL LQ E S+ H + +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 941 HLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAEAS 996
L+S +ARG+ +L S +H D+ +NVL D +++FGL R I + +
Sbjct: 140 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ P+ +++PEA T ++DV+SFG++L EI T G P E++ K +K+
Sbjct: 200 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 256
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--R 940
KH+N+ L G + ++V +Y GNL LQ E S+ H + +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 941 HLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAEAS 996
L+S +ARG+ +L S +H D+ +NVL D +++FGL R I + +
Sbjct: 143 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ P+ +++PEA T ++DV+SFG++L EI T G P E++ K +K+
Sbjct: 203 NGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 259
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 17/218 (7%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRL 909
I K ++ + ++++ L+D +++ E E + + KH+N+ L G + +
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118
Query: 910 LVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLISLG--LARGLSFLHSLD 958
+V +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 119 IV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 959 MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQP 1018
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDXXKKTTNGRLPVKWMAPEALFDRVY 236
Query: 1019 TKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLT 895
RQ + +GRYG +++ S+Q + + + I RD E ++ +E E V R+
Sbjct: 37 RQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD----EKSWFRETELYNTVMLRHEN 92
Query: 896 VLRGYYAGPPDVR------LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR 949
+L G+ A R L+ Y G+L LQ + L I L +A
Sbjct: 93 IL-GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR------IVLSIAS 145
Query: 950 GLSFLH--------SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
GL+ LH + H D+K +N+L + + +++ GL + + + P
Sbjct: 146 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 205
Query: 1002 -IGSLGYVSPEA------ASTGQPTKEADVYSFGIVLLEI 1034
+G+ Y++PE K D+++FG+VL E+
Sbjct: 206 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 882 EAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH 941
E + L KV R + L + D+ LV M G++ + +D P
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAI 292
Query: 942 LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
+ + GL LH ++++ D+KP+NVL D D +S+ G LA+ A + +
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGY 349
Query: 1002 IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
G+ G+++PE + D ++ G+ L E++ R P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ L P + G +LH ++H D+K N+ + D E + +FGL A
Sbjct: 112 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL---A 168
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ T G+ Y++PE S + E DV+S G ++ +L G+ P
Sbjct: 169 TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 882 EAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH 941
E + L KV R + L + D+ LV M G++ + +D P
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAI 292
Query: 942 LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
+ + GL LH ++++ D+KP+NVL D D +S+ G LA+ A + +
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGY 349
Query: 1002 IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
G+ G+++PE + D ++ G+ L E++ R P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 882 EAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH 941
E + L KV R + L + D+ LV M G++ + +D P
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAI 292
Query: 942 LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
+ + GL LH ++++ D+KP+NVL D D +S+ G LA+ A + +
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGY 349
Query: 1002 IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
G+ G+++PE + D ++ G+ L E++ R P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVL 897
FD L G YG ++KA +++ G +++I+++ + D KE + + ++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKY 89
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
G Y D+ +V +Y G+++ +++ + L I +GL +LH +
Sbjct: 90 YGSYFKNTDL-WIVMEYCGAGSVSDIIRLRNK----TLTEDEIATILQSTLKGLEYLHFM 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ 1017
+H DIK N+L + + A L++FG +A + IG+ +++PE
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFG---VAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 1018 PTKEADVYSFGIVLLEILTGRKP 1040
AD++S GI +E+ G+ P
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPP 224
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled Receptor
Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 882 EAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH 941
E + L KV R + L + D+ LV M G++ + +D P
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAI 292
Query: 942 LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
+ + GL LH ++++ D+KP+NVL D D +S+ G LA+ A + +
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGY 349
Query: 1002 IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
G+ G+++PE + D ++ G+ L E++ R P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 39 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 98
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 99 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 150
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T + + Y +PE +
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 39/243 (16%)
Query: 842 ENVLSRGRYG-LIFKASYQDGMVLSIRRLR----DGTIDENTFRKEAEALGKVKHRNLTV 896
E +L G G ++F+ S+Q G ++++R+ D + E E++ H N V
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPN--V 71
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFL 954
+R Y + D L + + N NL L++ + D ++ + ISL +A G++ L
Sbjct: 72 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 955 HSLDMVHGDIKPQNVL------FDADFEAH-------LSEFGL-DRLAIATPAEASSSTT 1000
HSL ++H D+KPQN+L F AD + +S+FGL +L + ++
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 1001 PIGSLGYVSPE-------AASTGQPTKEADVYSFGIVLLEILT-GRKPV--MFTQDEDIV 1050
P G+ G+ +PE + + T+ D++S G V IL+ G+ P ++++ +I+
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
Query: 1051 KWV 1053
+ +
Sbjct: 252 RGI 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ-----------EASHQDGHVLNWP 938
KH+N+ L G + ++V +Y GNL LQ SH L+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS-- 148
Query: 939 MRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAE 994
+ L+S +ARG+ +L S +H D+ +NVL D +++FGL R I +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
++ P+ +++PEA T ++DV+SFG++L EI T G P E++ K +
Sbjct: 209 TTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
Query: 1054 KK 1055
K+
Sbjct: 266 KE 267
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +++ E E + + KH+N+ L G GP V
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLISLG--LARGLSFLHS 956
+ +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 119 ---IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I ++T + +++PEA
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKNTTNGRLPVKWMAPEALFDR 234
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 89 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 140
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T E + + + Y +PE +
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGF---VATRWYRAPEIMLNWM 194
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 18/218 (8%)
Query: 845 LSRGRYGLIF----KASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGY 900
L G YG + K ++ + + IR+ T + +E L + H N+ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 901 YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
+ + L++ Y L E H+ N +I + G+++LH ++V
Sbjct: 105 FEDKRNYYLVMECYKG----GELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 961 HGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ 1017
H D+KP+N+L ++ D + +FGL A +G+ Y++PE
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLS----AVFENQKKMKERLGTAYYIAPEVLRKKY 214
Query: 1018 PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
K DV+S G++L +L G P D++I++ V+K
Sbjct: 215 DEK-CDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK 251
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T E + + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGF---VATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 33/223 (14%)
Query: 841 EENVLSRGRYGLIFKA----SYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVK-HRNLT 895
+E+VL G + + + Q+ V I + + G I FR E E L + + HRN+
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEK-QPGHIRSRVFR-EVEMLYQCQGHRNVL 74
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
L ++ D LV++ M G++ + + + H N ++ +A L FLH
Sbjct: 75 ELIEFFEEE-DRFYLVFEKMRGGSILSHIHKRRH-----FNELEASVVVQDVASALDFLH 128
Query: 956 SLDMVHGDIKPQNVLFDADFE---AHLSEFGL--------DRLAIATPAEASSSTTPIGS 1004
+ + H D+KP+N+L + + + +FGL D I+TP TP GS
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP----ELLTPCGS 184
Query: 1005 LGYVSPEAASTGQPT-----KEADVYSFGIVLLEILTGRKPVM 1042
Y++PE K D++S G++L +L+G P +
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 882 EAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNL---ATLLQEASHQDGHVLNWP 938
E L ++ H N+ L ++ + L++ Y G L L Q+ S D V+
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYR-GGELFDEIILRQKFSEVDAAVI--- 126
Query: 939 MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEA 995
M+ ++S G ++LH ++VH D+KP+N+L ++ D + +FGL A
Sbjct: 127 MKQVLS-----GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS----AHFEVG 177
Query: 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
+G+ Y++PE K DV+S G++L +L G P D++I+K V+K
Sbjct: 178 GKMKERLGTAYYIAPEVLRKKYDEK-CDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 236
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +++ E E + + KH+N+ L G GP V
Sbjct: 46 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 105
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHS 956
+ +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 106 ---IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 162
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 163 QKCIHRDLTARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDR 221
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 222 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 261
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +++ E E + + KH+N+ L G GP V
Sbjct: 51 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 110
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHS 956
+ +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 111 ---IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 167
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 168 QKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDR 226
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 227 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 266
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24)
In Complex With Staurosporine
Length = 304
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 15/213 (7%)
Query: 832 TLEATRQFDEENVLSRGRYGLIFKA---SYQDGMVLSIRRLRDGTIDENTFRKEAEALGK 888
+L+ F + + +G +G +FK Q + + I L + + ++E L +
Sbjct: 2 SLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 889 VKHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGL 947
+T G Y D +L ++ +Y+ G+ LL+ + + I +
Sbjct: 62 CDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREI 113
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGY 1007
+GL +LHS +H DIK NVL E L++FG+ T + + +G+ +
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF---VGTPFW 170
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
++PE +AD++S GI +E+ G P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +++ E E + + KH+N+ L G GP V
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHS 956
+ +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 119 ---IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 176 QKCIHRDLAARNVLVTENNVMRIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In
Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T E + + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGF---VATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +++ E E + + KH+N+ L G GP V
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYV 118
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHS 956
+ +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 119 ---IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +++ E E + + KH+N+ L G GP V
Sbjct: 48 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 107
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHS 956
+ +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 108 ---IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 164
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 165 QKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDR 223
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 224 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 263
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 112
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 113 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 164
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +FGL R T E + + Y +PE +
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGX---VATRWYRAPEIMLNWM 218
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 943 ISLGLARGLSFLHSLD-MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
+++ + + L +L ++H D+KP N+L D + L +FG+ + A+ S+
Sbjct: 129 MTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--- 185
Query: 1002 IGSLGYVSPEAASTGQPTK-----EADVYSFGIVLLEILTGRKP 1040
G Y++PE PTK ADV+S GI L+E+ TG+ P
Sbjct: 186 -GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain
From Human
Length = 314
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 35/217 (16%)
Query: 843 NVLSRGRYGLIFKAS-YQDGMVLSIRRLRDGTIDENTFRKEAEALGK--VKHRNLTVLRG 899
+ +RGR+G ++KA D + + I L+D + +++ E E +KH NL
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQD----KQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 900 YYAGPPDVRL---LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH- 955
++ + L+ + G+L L+ G+++ W ++ ++RGLS+LH
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLK------GNIITWNELCHVAETMSRGLSYLHE 130
Query: 956 ----------SLDMVHGDIKPQNVLFDADFEAHLSEFGLD-RLAIATPAEASSSTTPIGS 1004
+ H D K +NVL +D A L++FGL R P + +G+
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKP--PGDTHGQVGT 188
Query: 1005 LGYVSPEAASTG-QPTKEA----DVYSFGIVLLEILT 1036
Y++PE ++A D+Y+ G+VL E+++
Sbjct: 189 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 839 FDEENVLSRGRYGLIFKASY----QDGMVLSIRRLRDGTIDENT-----FRKEAEALGKV 889
F+ VL +G YG +F+ G + +++ L+ I N + E L +V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 890 KHRNLTVLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVL-NWPMRHLISLGL 947
KH + L YA +L L+ +Y+ G L L+ ++G + + +L + +
Sbjct: 79 KHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISM 132
Query: 948 ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGY 1007
A L LH +++ D+KP+N++ + L++FGL + +I + + + G++ Y
Sbjct: 133 A--LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI---HDGTVTHXFCGTIEY 187
Query: 1008 VSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
++PE + D +S G ++ ++LTG P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 846 SRGRYGLIFKASYQDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYYA 902
S GR I + S DG +L + L G++ E E L ++KH N+ YY
Sbjct: 18 SYGRCQKIRRKS--DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---RYYD 72
Query: 903 GPPD----VRLLVYDYMPNGNLATLLQEASHQDGHV-LNWPMRHLISLGLARGLSFLHSL 957
D +V +Y G+LA+++ + + + ++ + +R + L LA L H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRR 130
Query: 958 D-----MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
++H D+KP NV D L +FGL R+ + S + +G+ Y+SPE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSFAKAFVGTPYYMSPEQ 187
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKP-VMFTQDE 1047
+ +++D++S G +L E+ P F+Q E
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 33/262 (12%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGY--YAGPPDVRLLVYDYMPNGNLATLLQEASHQDG 932
DE F EA + K H+N+ G + P R ++ + M G+L + L+E +
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLP---RFILLELMAGGDLKSFLRETRPRPS 133
Query: 933 HVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGL--D 985
+ M L+ + +A G +L +H DI +N L A + +FG+ D
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQD 193
Query: 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFT 1044
+ + + P+ ++ PEA G T + D +SFG++L EI + G P
Sbjct: 194 IYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
Query: 1045 QDEDIVKWVKKQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSM 1104
+++++++V G++ W+ P DRP+
Sbjct: 251 SNQEVLEFVTSG---GRMDPPKNCPGPVYRIMTQCWQH--------------QPEDRPNF 293
Query: 1105 ADIVFMLEGCRVGPDMPSSADP 1126
A I+ +E C PD+ ++A P
Sbjct: 294 AIILERIEYCTQDPDVINTALP 315
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 939 MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD--FEAHLSEFGLDR-LAIATPAEA 995
MR + S L +LH+ + H DIKP+N LF + FE L +FGL + E
Sbjct: 174 MRQIFS-----ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 996 SSSTTPIGSLGYVSPEAASTGQPTK--EADVYSFGIVLLEILTGRKPVMFTQDEDIVKWV 1053
TT G+ +V+PE +T + + D +S G++L +L G P D D + V
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQV 288
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ-----------EASHQDGHVLNWP 938
KH+N+ L G + ++V +Y GNL LQ SH L+
Sbjct: 77 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS-- 133
Query: 939 MRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAE 994
+ L+S +ARG+ +L S +H D+ +NVL D +++FGL R I +
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
++ P+ +++PEA T ++DV+SFG++L EI T G P E++ K +
Sbjct: 194 TTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 250
Query: 1054 KK 1055
K+
Sbjct: 251 KE 252
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 17/218 (7%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRL 909
I K ++ + ++++ L+D +++ E E + + KH+N+ L G + +
Sbjct: 105 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164
Query: 910 LVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLISLG--LARGLSFLHSLD 958
+V +Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 165 IV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 223
Query: 959 MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQP 1018
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 224 CIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDRVY 282
Query: 1019 TKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 283 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 320
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 15/206 (7%)
Query: 839 FDEENVLSRGRYGLIFKA---SYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLT 895
F + + +G +G +FK Q + + I L + + ++E L + +T
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 896 VLRGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL 954
G Y D +L ++ +Y+ G+ LL+ + + I + +GL +L
Sbjct: 84 KYYGSYLK--DTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYL 135
Query: 955 HSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014
HS +H DIK NVL E L++FG+ T + + +G+ +++PE
Sbjct: 136 HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF---VGTPFWMAPEVIK 192
Query: 1015 TGQPTKEADVYSFGIVLLEILTGRKP 1040
+AD++S GI +E+ G P
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLF-----DADFEAHLSEFGL-DRLAIATPAEASSSTTPIG 1003
GL+ LHSL++VH D+KP N+L +A +S+FGL +LA+ + + S P G
Sbjct: 130 GLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP-G 188
Query: 1004 SLGYVSPEAASTG---QPTKEADVYSFGIVLLEILT 1036
+ G+++PE S PT D++S G V +++
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 445 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 498
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 499 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 558
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 559 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 592
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo)
Length = 271
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 111/276 (40%), Gaps = 35/276 (12%)
Query: 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRD-GTIDENTFRKEAEALGKVKHRNLTVLRGYYA 902
L+ G ++K +Q + +V+ + ++RD T F +E L H N+ + G
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 903 GPPDVR-LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD--M 959
PP L+ + P G+L +L E + V++ +L ARG +FLH+L+ +
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEGT---NFVVDQSQAVKFALDXARGXAFLHTLEPLI 134
Query: 960 VHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPT 1019
+ ++V D D A +S + + + +P + +V+PEA
Sbjct: 135 PRHALNSRSVXIDEDXTARISXADV-KFSFQSPGRXYAP-------AWVAPEALQKKPED 186
Query: 1020 ---KEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIXXXXXXXXXXXXXX 1076
+ AD +SF ++L E++T P + +I V + R I
Sbjct: 187 TNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVS----- 241
Query: 1077 XXXWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112
K+ +C DP RP IV +LE
Sbjct: 242 -----------KLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 885 ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH--VLNWPMRHL 942
A+G + H ++ L G G LV Y+P G+L +++ G +LNW ++
Sbjct: 68 AIGSLDHAHIVRLLGLCPG--SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ-- 123
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTT 1000
+A+G+ +L MVH ++ +NVL + + +++FG+ L + S + T
Sbjct: 124 ----IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
PI +++ E+ G+ T ++DV+S+G+ + E++T G +P
Sbjct: 180 PI---KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 446 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 499
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 500 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 559
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 560 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 593
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 848 GRYGLIFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLTVLRGYYAGPP 905
G +G ++KA ++ VL+ ++ D +E + E + L H N+ L +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIK 965
++ +L+ ++ G + ++ E L ++ L++LH ++H D+K
Sbjct: 81 NLWILI-EFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 966 PQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA----ASTGQPTK- 1020
N+LF D + L++FG+ T + S IG+ +++PE S +P
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF--IGTPYWMAPEVVMCETSKDRPYDY 193
Query: 1021 EADVYSFGIVLLEILTGRKP 1040
+ADV+S GI L+E+ P
Sbjct: 194 KADVWSLGITLIEMAEIEPP 213
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 890 KHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ-----------EASHQDGHVLNWP 938
KH+N+ L G + ++V +Y GNL LQ SH L+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS-- 148
Query: 939 MRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAE 994
+ L+S +ARG+ +L S +H D+ +NVL D +++FGL R I +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053
++ P+ +++PEA T ++DV+SFG++L EI T G P E++ K +
Sbjct: 209 TTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
Query: 1054 KK 1055
K+
Sbjct: 266 KE 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAG--PPDVRLLVYDYMPNGNLATLLQ----EASHQDGHV 934
KE +A+ + H N+ YY D LV + G++ +++ + H+ G V
Sbjct: 62 KEIQAMSQCHHPNIV---SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-V 117
Query: 935 LNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994
L+ I + GL +LH +H D+K N+L D +++FG+ +AT +
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF-LATGGD 176
Query: 995 ASSS---TTPIGSLGYVSPEAASTGQPTK-EADVYSFGIVLLEILTGRKP 1040
+ + T +G+ +++PE + +AD++SFGI +E+ TG P
Sbjct: 177 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To (s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To (R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + T G+ Y++PE + K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAKRV------KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQ 1045
++ E+ G P Q
Sbjct: 228 LIYEMAAGYPPFFADQ 243
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex With
Amp-Pnp
Length = 344
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 885 ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH--VLNWPMRHL 942
A+G + H ++ L G G LV Y+P G+L +++ G +LNW
Sbjct: 86 AIGSLDHAHIVRLLGLCPG--SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW----- 138
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE--ASSSTT 1000
+ +A+G+ +L MVH ++ +NVL + + +++FG+ L + S + T
Sbjct: 139 -GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKP 1040
PI +++ E+ G+ T ++DV+S+G+ + E++T G +P
Sbjct: 198 PI---KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2
Length = 400
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG + L+V + + G L + +Q+ Q I + +
Sbjct: 119 RIVDVYENLYAGRKCL-LIVXECLDGGELFSRIQDRGDQ---AFTEREASEIXKSIGEAI 174
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S TTP + YV
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTTPCYTPYYV 230
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D +S G++ +L G P I K +++ GQ
Sbjct: 231 APEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQ 283
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAG--PPDVRLLVYDYMPNGNLATLLQ----EASHQDGHV 934
KE +A+ + H N+ YY D LV + G++ +++ + H+ G V
Sbjct: 57 KEIQAMSQCHHPNIV---SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-V 112
Query: 935 LNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994
L+ I + GL +LH +H D+K N+L D +++FG+ +AT +
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF-LATGGD 171
Query: 995 ASSS---TTPIGSLGYVSPEAASTGQPTK-EADVYSFGIVLLEILTGRKP 1040
+ + T +G+ +++PE + +AD++SFGI +E+ TG P
Sbjct: 172 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
+ +GRYG +++ S+Q + + + I RD E ++ +E E V R+ +L G+ A
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRD----EKSWFRETELYNTVMLRHENIL-GFIAS 70
Query: 904 PPDVR------LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH-- 955
R L+ Y G+L LQ + L I L +A GL+ LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR------IVLSIASGLAHLHIE 124
Query: 956 ------SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYV 1008
+ H D+K +N+L + + +++ GL + + + P +G+ Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 1009 SPEA------ASTGQPTKEADVYSFGIVLLEI 1034
+PE K D+++FG+VL E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
+ + H +VH D+KP+N+L D + +++FGL + + + T GS Y +
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAA 175
Query: 1010 PEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
PE + E DV+S GIVL +L GR P DE I KK
Sbjct: 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF---DDEFIPNLFKK 219
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex With
Ldn- 193189
Length = 301
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
+ +GRYG +++ S+Q + + + I RD E ++ +E E V R+ +L G+ A
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRD----EKSWFRETELYNTVMLRHENIL-GFIAS 70
Query: 904 PPDVR------LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH-- 955
R L+ Y G+L LQ + L I L +A GL+ LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR------IVLSIASGLAHLHIE 124
Query: 956 ------SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYV 1008
+ H D+K +N+L + + +++ GL + + + P +G+ Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 1009 SPEA------ASTGQPTKEADVYSFGIVLLEI 1034
+PE K D+++FG+VL E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C Beta
Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIK 965
D V +Y+ G+L +Q+ P + +A GL FL S +++ D+K
Sbjct: 94 DRLYFVMEYVNGGDLMYHIQQVGR-----FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK 148
Query: 966 PQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVY 1025
NV+ D++ +++FG+ + I + ++ G+ Y++PE + K D +
Sbjct: 149 LDNVMLDSEGHIKIADFGMCKENI---WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 205
Query: 1026 SFGIVLLEILTGRKPVMFTQDED 1048
+FG++L E+L G+ P +DED
Sbjct: 206 AFGVLLYEMLAGQAPFE-GEDED 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860
Length = 467
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 882 EAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNL---ATLLQEASHQDGHVLNWP 938
E L ++ H N+ L ++ + LV + G L L Q+ S D V+
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNY-YLVMEVYRGGELFDEIILRQKFSEVDAAVI--- 109
Query: 939 MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAEA 995
M+ ++S G ++LH ++VH D+KP+N+L ++ D + +FGL A
Sbjct: 110 MKQVLS-----GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS----AHFEVG 160
Query: 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
+G+ Y++PE K DV+S G++L +L G P D++I+K V+K
Sbjct: 161 GKMKERLGTAYYIAPEVLRKKYDEK-CDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 219
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 166/414 (40%), Gaps = 83/414 (20%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
V L L + +N L P + N + LV + +N + + P + ++ L L+L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 269 SRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIR 328
N++T + P+ N+++L ++L N + + ++ L+ L +N++
Sbjct: 115 FNNQITDIDPLK-------NLTNLNRLELSSNTISDISAL---SGLTSLQQLSFSSNQVT 164
Query: 329 AVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSL 388
+ P L N+T+L +D+S N S + + L LE L NN +S + P + +
Sbjct: 165 DLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTN 218
Query: 389 LQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIR 448
L L GN+ L + L + L N S L PLS L++L L L N I
Sbjct: 219 LDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQIS 274
Query: 449 GNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGKIPGSIGSLMR 508
P + L
Sbjct: 275 NISP--------------------------------------------------LAGLTA 284
Query: 509 LTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFT 568
LT L+L+ L PI L +L ++L NN+S P SSL LQ L S+N +
Sbjct: 285 LTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVS 340
Query: 569 GDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVD 622
D+ ++ L ++ +LS HNQIS + P L + + L L +T N PV+
Sbjct: 341 -DV-SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT-NAPVN 389
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 50/279 (17%)
Query: 166 SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL 225
SL+ L SSN T P ++ + L+ +++S N S + + +L LE L +N +
Sbjct: 152 SLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQI 207
Query: 226 YGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNL 285
P I ++L LS N LK + GT+ ++ L L L+ N+++ L P+S L
Sbjct: 208 SDITPLGI--LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGL--- 260
Query: 286 WGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMD 345
+ L ++LG N + + P G ++ L L+L N++ + P ++N+ +L +
Sbjct: 261 ----TKLTELKLGANQISN-ISPLAG--LTALTNLELNENQLEDISP--ISNLKNLTYLT 311
Query: 346 LSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPA 405
L N S P V SL KL+ L +NN +S + +
Sbjct: 312 LYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--------------------------S 343
Query: 406 FLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSE 444
L + + +S G N S L PL NL+++ L L++
Sbjct: 344 SLANLTNINWLSAGHNQISDLTPL--ANLTRITQLGLND 380
Score = 37.4 bits (85), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 506 LMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDN 565
L LT ++ SN L+ P++ L L + + N ++ P ++L L L L +N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 566 AFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISH 625
T P L +L L LS N IS + + L ++L+ L SN T P +++
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LAN 171
Query: 626 LSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIP 668
L+ +++LD+ NK+S ++K ++L SL N +S P
Sbjct: 172 LTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 845 LSRGRYGLIFKASYQ-----DGMVLSIRRLRD--GTIDENTFRKEAEALGKVKHRNLTVL 897
L G +G + Y G +++++ L+ G + +++E + L + H ++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 898 RGYY--AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
+G AG ++L V +Y+P G+L L H + L + + G+++LH
Sbjct: 99 KGCCEDAGAASLQL-VMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLH 151
Query: 956 SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAST 1015
+ +H D+ +NVL D D + +FGL + + + +PE
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 1016 GQPTKEADVYSFGIVLLEILT 1036
+ +DV+SFG+ L E+LT
Sbjct: 212 YKFYYASDVWSFGVTLYELLT 232
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 939 MRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD---FEAHLSEFGLDRLAIATPAEA 995
M+ ++S G+ +LH ++VH DIKP+N+L + + +FGL ++
Sbjct: 152 MKQILS-----GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF----SKD 202
Query: 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055
+G+ Y++PE + ++ DV+S G+++ +L G P D+DI+K V+K
Sbjct: 203 YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK 261
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + + GL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 892 RNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL 951
R + V YAG + L+V + + G L + +Q+ Q I + +
Sbjct: 73 RIVDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAI 128
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+LHS+++ H D+KP+N+L+ + L++FG + + +S T P + YV
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS----HNSLTEPCYTPYYV 184
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
+PE + K D++S G+++ +L G P I +K +++ GQ
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 237
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ L P + G +LH ++H D+K N+ + D E + +FG LA
Sbjct: 106 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LA 162
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ G+ Y++PE S + E DV+S G ++ +L G+ P
Sbjct: 163 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 845 LSRGRYGLIFKASYQ-----DGMVLSIRRLRD--GTIDENTFRKEAEALGKVKHRNLTVL 897
L G +G + Y G +++++ L+ G + +++E + L + H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 898 RGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
+G + L LV +Y+P G+L L S +L L + + G+++LHS
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL------LFAQQICEGMAYLHS 135
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H ++ +NVL D D + +FGL + + + +PE
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 1017 QPTKEADVYSFGIVLLEILT 1036
+ +DV+SFG+ L E+LT
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + + GL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 104 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 158
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + T G+ Y++PE + K D ++ G+
Sbjct: 159 LIDQQGYIQVTDFGFAKRV------KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 212
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 213 LIYEMAAGYPP--FFADQPI 230
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ L P + G +LH ++H D+K N+ + D E + +FG LA
Sbjct: 130 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LA 186
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ G+ Y++PE S + E DV+S G ++ +L G+ P
Sbjct: 187 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 140
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 200
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 201 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 234
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +++ E E + + KH+N+ L G GP V
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHS 956
+ Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 119 ---IVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase
1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ L P + G +LH ++H D+K N+ + D E + +FG LA
Sbjct: 132 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LA 188
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ G+ Y++PE S + E DV+S G ++ +L G+ P
Sbjct: 189 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 39/243 (16%)
Query: 842 ENVLSRGRYG-LIFKASYQDGMVLSIRRLR----DGTIDENTFRKEAEALGKVKHRNLTV 896
E +L G G ++F+ S+Q G ++++R+ D + E E++ H N V
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPN--V 71
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFL 954
+R Y + D L + + N NL L++ + D ++ + ISL +A G++ L
Sbjct: 72 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 955 HSLDMVHGDIKPQNVL------FDADFEAH-------LSEFGL-DRLAIATPAEASSSTT 1000
HSL ++H D+KPQN+L F AD + +S+FGL +L +
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 1001 PIGSLGYVSPE-------AASTGQPTKEADVYSFGIVLLEILT-GRKPV--MFTQDEDIV 1050
P G+ G+ +PE + + T+ D++S G V IL+ G+ P ++++ +I+
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
Query: 1051 KWV 1053
+ +
Sbjct: 252 RGI 254
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y-
27632
Length = 350
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +YMP G++ + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYMPGGDMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +YMP G++ + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYMPGGDMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 22/217 (10%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDG-----TIDENTFRKEAEALGKVKHRNLTV 896
EN + RG +G + K + Q G IRR D + F++E E + + H N+
Sbjct: 14 ENTIGRGSWGEV-KIAVQKGT--RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L + D+ LV + G L + H+ V I + +++ H
Sbjct: 71 LYETFEDNTDI-YLVMELCTGGEL---FERVVHK--RVFRESDAARIMKDVLSAVAYCHK 124
Query: 957 LDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
L++ H D+KP+N LF D L +FGL A T +G+ YVSP+
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGL----AARFKPGKMMRTKVGTPYYVSPQVL 180
Query: 1014 STGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
G E D +S G+++ +L G P D +++
Sbjct: 181 E-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 853 IFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKV-KHRNLTVLRGYYA--GPPDV 907
I K ++ + ++++ L+D +++ E E + + KH+N+ L G GP V
Sbjct: 59 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118
Query: 908 RLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPM--RHLIS--LGLARGLSFLHS 956
+ Y GNL L+ E S+ V M + L+S LARG+ +L S
Sbjct: 119 ---IVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H D+ +NVL + +++FGL R I +T + +++PEA
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 1017 QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
T ++DV+SFG+++ EI T G P E++ K +K+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 841 EENVLSRGRYGLIFKA----SYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVK-HRNLT 895
+E+VL G + + + Q+ V I + + G I FR E E L + + HRN+
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEK-QPGHIRSRVFR-EVEMLYQCQGHRNVL 74
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
L ++ D LV++ M G++ + + + H N ++ +A L FLH
Sbjct: 75 ELIEFFEEE-DRFYLVFEKMRGGSILSHIHKRRH-----FNELEASVVVQDVASALDFLH 128
Query: 956 SLDMVHGDIKPQNVLFDADFE---AHLSEF----GLDRLAIATPAEASSSTTPIGSLGYV 1008
+ + H D+KP+N+L + + + +F G+ +P TP GS Y+
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 1009 SPEAASTGQPT-----KEADVYSFGIVLLEILTGRKPVM 1042
+PE K D++S G++L +L+G P +
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLTVLRGYYA 902
L G +G ++KA ++ VL+ ++ D +E + E + L H N+ L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962
++ +L+ ++ G + ++ E L ++ L++LH ++H
Sbjct: 105 YENNLWILI-EFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA----ASTGQP 1018
D+K N+LF D + L++FG+ T S IG+ +++PE S +P
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF---IGTPYWMAPEVVMCETSKDRP 216
Query: 1019 TK-EADVYSFGIVLLEILTGRKP 1040
+ADV+S GI L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 22/217 (10%)
Query: 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDG-----TIDENTFRKEAEALGKVKHRNLTV 896
EN + RG +G + K + Q G IRR D + F++E E + + H N+
Sbjct: 31 ENTIGRGSWGEV-KIAVQKGT--RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
L + D+ LV + G L + H+ V I + +++ H
Sbjct: 88 LYETFEDNTDI-YLVMELCTGGEL---FERVVHK--RVFRESDAARIMKDVLSAVAYCHK 141
Query: 957 LDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
L++ H D+KP+N LF D L +FGL A T +G+ YVSP+
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGL----AARFKPGKMMRTKVGTPYYVSPQVL 197
Query: 1014 STGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
G E D +S G+++ +L G P D +++
Sbjct: 198 E-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 233
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 13/205 (6%)
Query: 839 FDEENVLSRGRYGLIFKA---SYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLT 895
F + + +G +G +FK Q + + I L + + ++E L + +T
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 896 VLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
G Y + ++ +Y+ G+ LL+ + + ++ ++ +GL +LH
Sbjct: 85 KYYGSYLKGSKL-WIIMEYLGGGSALDLLRAGPFDEFQIATM-LKEIL-----KGLDYLH 137
Query: 956 SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAST 1015
S +H DIK NVL + L++FG+ T + + T +G+ +++PE
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN---TFVGTPFWMAPEVIQQ 194
Query: 1016 GQPTKEADVYSFGIVLLEILTGRKP 1040
+AD++S GI +E+ G P
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 943 ISLGLARGLSFL-HSLDMVHGDIKPQNVLFDADFEAHLSEFGLD-RLAIATPAEASSSTT 1000
I+L + L+ L +L ++H DIKP N+L D L +FG+ +L + +
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCR 189
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPV-----MFTQDEDIVKWVKK 1055
P + + P A+ G + +DV+S GI L E+ TGR P +F Q +VK
Sbjct: 190 PYMAPERIDPSASRQGYDVR-SDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP 248
Query: 1056 QLQRGQ 1061
QL +
Sbjct: 249 QLSNSE 254
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G+ +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + + GL R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 81 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 134
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 135 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 194
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 195 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 228
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 93 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 146
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 240
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 156
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 216
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 217 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 250
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 156
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 216
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 217 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 250
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A
Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 83 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 136
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 137 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 196
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 197 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex
With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 87 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 140
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 141 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 200
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 201 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 234
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 909 LLVYDYMPNGNLATLLQEASH-QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQ 967
+LV + G L LQ+ H +D +++ + H +S+G+ +L + VH D+ +
Sbjct: 101 MLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGM----KYLEESNFVHRDLAAR 154
Query: 968 NVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027
NVL A +S+FGL + A + T + + +PE + + + ++DV+SF
Sbjct: 155 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 214
Query: 1028 GIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060
G+++ E + G+KP + ++ ++K + G
Sbjct: 215 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG 248
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRR--LRDGTIDENTFRKEAEALGKVKHRNLT-VLRGY 900
+ G G++ A+ + G ++++++ LR E F E + +H N+ + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 97
Query: 901 YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
G D +V +++ G L ++ + + + L + + LS LH+ ++
Sbjct: 98 LVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGVI 149
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTK 1020
H DIK ++L D LS+FG E +G+ +++PE S
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 1021 EADVYSFGIVLLEILTGRKP 1040
E D++S GI+++E++ G P
Sbjct: 207 EVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRR--LRDGTIDENTFRKEAEALGKVKHRNLT-VLRGY 900
+ G G++ A+ + G ++++++ LR E F E + +H N+ + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 86
Query: 901 YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
G D +V +++ G L ++ + + + L + + LS LH+ ++
Sbjct: 87 LVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGVI 138
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTK 1020
H DIK ++L D LS+FG E +G+ +++PE S
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 1021 EADVYSFGIVLLEILTGRKP 1040
E D++S GI+++E++ G P
Sbjct: 196 EVDIWSLGIMVIEMVDGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex
With A Consensus Peptide
Length = 301
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRR--LRDGTIDENTFRKEAEALGKVKHRNLT-VLRGY 900
+ G G++ A+ + G ++++++ LR E F E + +H N+ + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 95
Query: 901 YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
G D +V +++ G L ++ + + + L + + LS LH+ ++
Sbjct: 96 LVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGVI 147
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTK 1020
H DIK ++L D LS+FG E +G+ +++PE S
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 1021 EADVYSFGIVLLEILTGRKP 1040
E D++S GI+++E++ G P
Sbjct: 205 EVDIWSLGIMVIEMVDGEPP 224
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 848 GRYGLIFKA-SYQDGMVLSIRRLR---DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG 903
G YG + A + G +++++L I +E L +KH N+ L +
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 904 PP------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957
DV L+ + + +L +++ D HV + + RGL ++HS
Sbjct: 93 ARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTDDHV------QFLIYQILRGLKYIHSA 144
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA-STG 1016
D++H D+KP N+ + D E + +F L R T + + Y +PE +
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLAR------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 1017 QPTKEADVYSFGIVLLEILTGR 1038
+ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN----GNLATLLQEASHQDG 932
T+R E L +KH N+ L + + Y+ +L +++ + D
Sbjct: 73 RTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDE 131
Query: 933 HVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
HV + L RGL ++HS ++H D+KP NV + D E + +FGL R A
Sbjct: 132 HV------QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA---- 181
Query: 993 AEASSSTTPIGSLGYVSPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
T + + Y +PE + + D++S G ++ E+L G+
Sbjct: 182 --DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 109/279 (39%), Gaps = 55/279 (19%)
Query: 158 KISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEY 217
K+ D+ P LDL +N T G+F + L + L N S P + L +LE
Sbjct: 45 KVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLER 104
Query: 218 LWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLV 277
L+L N L LP + TLQ L + NE+T
Sbjct: 105 LYLSKNQL-KELPEKMP--------------------------KTLQELRVHENEIT--- 134
Query: 278 PVSVLCNLWGNISSLRIVQLGFN----------AFTGVVKPPNGRCVSVLEVLDLQNNRI 327
V +++ ++ + +V+LG N AF G+ K +S + + D I
Sbjct: 135 --KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK------LSYIRIADTNITTI 186
Query: 328 RAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCS 387
P LT + L GN + A++ L+ L L ++ NS+S + +A
Sbjct: 187 PQGLPPSLTE------LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP 240
Query: 388 LLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGL 426
L+ L N+ +VP L + +++V L N S +
Sbjct: 241 HLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 278
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRR--LRDGTIDENTFRKEAEALGKVKHRNLT-VLRGY 900
+ G G++ A+ + G ++++++ LR E F E + +H N+ + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 90
Query: 901 YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
G D +V +++ G L ++ + + + L + + LS LH+ ++
Sbjct: 91 LVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGVI 142
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTK 1020
H DIK ++L D LS+FG E +G+ +++PE S
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 1021 EADVYSFGIVLLEILTGRKP 1040
E D++S GI+++E++ G P
Sbjct: 200 EVDIWSLGIMVIEMVDGEPP 219
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 42/260 (16%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
V L L + +N L P + N + LV + +N + + P + ++ L L+L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 269 SRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIR 328
N++T + P+ N+++L ++L N + + ++ L+ L+ +N++
Sbjct: 115 FNNQITDIDPLK-------NLTNLNRLELSSNTISDISAL---SGLTSLQQLNFSSNQVT 164
Query: 329 AVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVP-------D 381
+ P L N+T+L +D+S N S + + L LE L NN +S + P D
Sbjct: 165 DLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITPLGILTNLD 220
Query: 382 EI-------------AKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIP 428
E+ A + L DL N+ S P L G+ L + LG N S + P
Sbjct: 221 ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 278
Query: 429 LSFGNLSQLETLNLSENDIR 448
L L+ L L L+EN +
Sbjct: 279 L--AGLTALTNLELNENQLE 296
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 159/363 (43%), Gaps = 35/363 (9%)
Query: 260 ISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEV 319
++ L ++ S N+LT + P+ N++ L + + N + N ++ L
Sbjct: 62 LNNLTQINFSNNQLTDITPLK-------NLTKLVDILMNNNQIADITPLAN---LTNLTG 111
Query: 320 LDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLV 379
L L NN+I + P L N+T+L ++LS N S +A+ L L+ L ++N ++ L
Sbjct: 112 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLK 167
Query: 380 PDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLET 439
P +A + L+ D+ N+ S + L + L+ + N S + PL G L+ L+
Sbjct: 168 P--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITPL--GILTNLDE 221
Query: 440 LNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGKI 499
L+L+ N ++ + N+ P A+ S
Sbjct: 222 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNIS 277
Query: 500 PGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQY 559
P + L LT L+L+ L PI L +L ++L NN+S P SSL LQ
Sbjct: 278 P--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQR 331
Query: 560 LNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNI 619
L +N + D+ ++ L ++ +LS HNQIS + P L + + L L +T N
Sbjct: 332 LFFYNNKVS-DV-SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT-NA 386
Query: 620 PVD 622
PV+
Sbjct: 387 PVN 389
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 50/279 (17%)
Query: 166 SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL 225
SL+ L+ SSN T P ++ + L+ +++S N S + + +L LE L +N +
Sbjct: 152 SLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQI 207
Query: 226 YGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNL 285
P I ++L LS N LK + GT+ ++ L L L+ N+++ L P+S L
Sbjct: 208 SDITPLGI--LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGL--- 260
Query: 286 WGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMD 345
+ L ++LG N + + P G ++ L L+L N++ + P ++N+ +L +
Sbjct: 261 ----TKLTELKLGANQISN-ISPLAG--LTALTNLELNENQLEDISP--ISNLKNLTYLT 311
Query: 346 LSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPA 405
L N S P V SL KL+ L NN +S + +
Sbjct: 312 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--------------------------S 343
Query: 406 FLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSE 444
L + + +S G N S L PL NL+++ L L++
Sbjct: 344 SLANLTNINWLSAGHNQISDLTPL--ANLTRITQLGLND 380
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 506 LMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDN 565
L LT ++ SN L+ P++ L L + + N ++ P ++L L L L +N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 566 AFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISH 625
T P L +L L LS N IS + + L ++L+ L SN T P +++
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP--LAN 171
Query: 626 LSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIP 668
L+ +++LD+ NK+S ++K ++L SL N +S P
Sbjct: 172 LTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 112 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 170
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 109/279 (39%), Gaps = 55/279 (19%)
Query: 158 KISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEY 217
K+ D+ P LDL +N T G+F + L + L N S P + L +LE
Sbjct: 45 KVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLER 104
Query: 218 LWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLV 277
L+L N L LP + TLQ L + NE+T
Sbjct: 105 LYLSKNQL-KELPEKMP--------------------------KTLQELRVHENEIT--- 134
Query: 278 PVSVLCNLWGNISSLRIVQLGFN----------AFTGVVKPPNGRCVSVLEVLDLQNNRI 327
V +++ ++ + +V+LG N AF G+ K +S + + D I
Sbjct: 135 --KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK------LSYIRIADTNITTI 186
Query: 328 RAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCS 387
P LT + L GN + A++ L+ L L ++ NS+S + +A
Sbjct: 187 PQGLPPSLTE------LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP 240
Query: 388 LLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGL 426
L+ L N+ +VP L + +++V L N S +
Sbjct: 241 HLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 278
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1
Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human Chk1
Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint Kinase
1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 172
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 172
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 172
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLP 172
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLI--SLGLARGLSFLHSLDMVHGDIKPQNVLF 971
++ +L+ + +E + +D + + HLI S +A+G+ FL S +H D+ +N+L
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 224
Query: 972 DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVL 1031
+ +FGL R P + L +++PE T ++DV+SFG++L
Sbjct: 225 SEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLL 283
Query: 1032 LEILT 1036
EI +
Sbjct: 284 WEIFS 288
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 939 MRHLIS--LGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
M LIS +ARG+ FL S +H D+ +N+L + + +FGL R P
Sbjct: 198 MEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVR 257
Query: 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQ-DEDIVKWVK 1054
T + L +++PE+ + ++DV+S+G++L EI + G P Q DED ++
Sbjct: 258 KGDTRL-PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLR 316
Query: 1055 KQLQRGQIXXXXXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMADIV 1108
+ ++ ++ L C DP +RP A++V
Sbjct: 317 EGMRMRAPEYSTPEI-----------------YQIMLDCWHRDPKERPRFAELV 353
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 845 LSRGRYGLIFKASYQ-----DGMVLSIRRLRD--GTIDENTFRKEAEALGKVKHRNLTVL 897
L G +G + Y G +++++ L+ G + +++E + L + H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 898 RGYYAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS 956
+G + L LV +Y+P G+L L S +L L + + G+++LH+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL------LFAQQICEGMAYLHA 135
Query: 957 LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG 1016
+H ++ +NVL D D + +FGL + + + +PE
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 1017 QPTKEADVYSFGIVLLEILT 1036
+ +DV+SFG+ L E+LT
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN----GNLATLLQEASHQDG 932
T+R E L +KH N+ L + + Y+ +L +++ + D
Sbjct: 65 RTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDE 123
Query: 933 HVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
HV + L RGL ++HS ++H D+KP NV + D E + +FGL R A
Sbjct: 124 HV------QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA---- 173
Query: 993 AEASSSTTPIGSLGYVSPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
T + + Y +PE + + D++S G ++ E+L G+
Sbjct: 174 --DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 172
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 172
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 172
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLI--SLGLARGLSFLHSLDMVHGDIKPQNVLF 971
++ +L+ + +E + +D + + HLI S +A+G+ FL S +H D+ +N+L
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 226
Query: 972 DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVL 1031
+ +FGL R P + L +++PE T ++DV+SFG++L
Sbjct: 227 SEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLL 285
Query: 1032 LEILT 1036
EI +
Sbjct: 286 WEIFS 290
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLI--SLGLARGLSFLHSLDMVHGDIKPQNVLF 971
++ +L+ + +E + +D + + HLI S +A+G+ FL S +H D+ +N+L
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 231
Query: 972 DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVL 1031
+ +FGL R P + L +++PE T ++DV+SFG++L
Sbjct: 232 SEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLL 290
Query: 1032 LEILT 1036
EI +
Sbjct: 291 WEIFS 295
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 890 KHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASH-----QDGHVLNWPMRHL 942
+H N+ L G + GP L++ +Y G+L L+ + +DG L +R L
Sbjct: 100 QHENIVNLLGACTHGGPV---LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE--LRDL 154
Query: 943 ISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ +A+G++FL S + +H D+ +NVL A + +FGL R I +
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGN 213
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ +++PE+ T ++DV+S+GI+L EI +
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And
Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In
Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 11/156 (7%)
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
V Y PD + D M G+L L Q G MR + + GL
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFSEADMR-FYAAEIILGLEH 307
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
+H+ +V+ D+KP N+L D +S+ GL A +G+ GY++PE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-----ACDFSKKKPHASVGTHGYMAPEVL 362
Query: 1014 STGQP-TKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
G AD +S G +L ++L G P + +D
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 11/156 (7%)
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
V Y PD + D M G+L L Q G MR + + GL
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFSEADMR-FYAAEIILGLEH 307
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
+H+ +V+ D+KP N+L D +S+ GL A +G+ GY++PE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-----ACDFSKKKPHASVGTHGYMAPEVL 362
Query: 1014 STGQP-TKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
G AD +S G +L ++L G P + +D
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 846 SRGRYGLIFKASYQDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYYA 902
S GR I + S DG +L + L G++ E E L ++KH N+ YY
Sbjct: 18 SYGRCQKIRRKS--DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---RYYD 72
Query: 903 GPPD----VRLLVYDYMPNGNLATLLQEASHQDGHV-LNWPMRHLISLGLARGLSFLHSL 957
D +V +Y G+LA+++ + + + ++ + +R + L LA L H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHRR 130
Query: 958 D-----MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA 1012
++H D+KP NV D L +FGL R+ + + +G+ Y+SPE
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDEDFAKEFVGTPYYMSPEQ 187
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKP-VMFTQDE 1047
+ +++D++S G +L E+ P F+Q E
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 172
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 890 KHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASH-----QDGHVLNWPMRHL 942
+H N+ L G + GP L++ +Y G+L L+ + +DG L +R L
Sbjct: 108 QHENIVNLLGACTHGGPV---LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE--LRDL 162
Query: 943 ISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000
+ +A+G++FL S + +H D+ +NVL A + +FGL R I +
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGN 221
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ +++PE+ T ++DV+S+GI+L EI +
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 111 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 165
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 166 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 1030 VLLEILTGRKPVMFTQ 1045
++ E+ G P Q
Sbjct: 220 LIYEMAAGYPPFFADQ 235
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLI--SLGLARGLSFLHSLDMVHGDIKPQNVLF 971
++ +L+ + +E + +D + + HLI S +A+G+ FL S +H D+ +N+L
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 233
Query: 972 DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVL 1031
+ +FGL R P + L +++PE T ++DV+SFG++L
Sbjct: 234 SEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIFDRVYTIQSDVWSFGVLL 292
Query: 1032 LEILT 1036
EI +
Sbjct: 293 WEIFS 297
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTIDE----NTFRKEA--EALG 887
AT +++ + G YG ++KA G ++++ +R +E +T R+ A L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 888 KVKHRNLTVLRGYYAGPPDVR----LLVYDYMPNGNLATLLQEASHQ--DGHVLNWPMRH 941
+H N+ L A R LV++++ + +L T L +A + MR
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 942 LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
+ RGL FLH+ +VH D+KP+N+L + L++FGL R+ A A T
Sbjct: 121 FL-----RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVT- 174
Query: 1002 IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE 1047
L Y +PE D++S G + E+ RKP+ E
Sbjct: 175 ---LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSE 216
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 11/156 (7%)
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
V Y PD + D M G+L L Q G MR + + GL
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFSEADMR-FYAAEIILGLEH 307
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
+H+ +V+ D+KP N+L D +S+ GL A +G+ GY++PE
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-----ACDFSKKKPHASVGTHGYMAPEVL 362
Query: 1014 STGQP-TKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
G AD +S G +L ++L G P + +D
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQ 1045
++ E+ G P Q
Sbjct: 228 LIYEMAAGYPPFFADQ 243
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 11/156 (7%)
Query: 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF 953
V Y PD + D M G+L L Q G MR + + GL
Sbjct: 252 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFSEADMR-FYAAEIILGLEH 306
Query: 954 LHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAA 1013
+H+ +V+ D+KP N+L D +S+ GL A +G+ GY++PE
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGL-----ACDFSKKKPHASVGTHGYMAPEVL 361
Query: 1014 STGQP-TKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
G AD +S G +L ++L G P + +D
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 139 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 193
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 194 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 1030 VLLEILTGRKPVMFTQ 1045
++ E+ G P Q
Sbjct: 248 LIYEMAAGYPPFFADQ 263
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L G+ +LH + + H DIKP+N+L D +S+FGL + E + G+L
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-CGTLP 171
Query: 1007 YVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRKP 1040
YV+PE + E DV+S GIVL +L G P
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRR--LRDGTIDENTFRKEAEALGKVKHRNLT-VLRGY 900
+ G G++ A+ + G ++++++ LR E F E + +H N+ + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 140
Query: 901 YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
G D +V +++ G L ++ + + + L + + LS LH+ ++
Sbjct: 141 LVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQGVI 192
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTK 1020
H DIK ++L D LS+FG E +G+ +++PE S
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 1021 EADVYSFGIVLLEILTGRKP 1040
E D++S GI+++E++ G P
Sbjct: 250 EVDIWSLGIMVIEMVDGEPP 269
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3
(Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L + DV +L+ + + G L L E ++
Sbjct: 57 REVNILREIRHPNIITLHDIFENKTDV-VLILELVSGGELFDFLAEKESLTEDEATQFLK 115
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
++ G+ +LHS + H D+KP+N+ L D + L +FG IA EA
Sbjct: 116 QILD-----GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG-----IAHKIEAG 165
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 212
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 32/197 (16%)
Query: 875 DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLL--------QE 926
D +EA +KH N+ L + LV+D + G L + +
Sbjct: 73 DHQKLEREARICRLLKHPNIVRLHDSIS-EEGFHYLVFDLVTGGELFEDIVAREYYSEAD 131
Query: 927 ASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFG 983
ASH +L ++ +H D+VH D+KP+N+L + + L++FG
Sbjct: 132 ASHCIHQILE-------------SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFG 178
Query: 984 LDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMF 1043
L AI E + G+ GY+SPE K D+++ G++L +L G P
Sbjct: 179 L---AIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFW- 234
Query: 1044 TQDEDIVKWVKKQLQRG 1060
DED K + +Q++ G
Sbjct: 235 --DEDQHK-LYQQIKAG 248
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLTVLRGYYA 902
L G +G ++KA ++ VL+ ++ D +E + E + L H N+ L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962
++ +L+ ++ G + ++ E L ++ L++LH ++H
Sbjct: 105 YENNLWILI-EFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA----ASTGQP 1018
D+K N+LF D + L++FG ++ + IG+ +++PE S +P
Sbjct: 160 DLKAGNILFTLDGDIKLADFG---VSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 1019 TK-EADVYSFGIVLLEILTGRKP 1040
+ADV+S GI L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L + DV +L+ + + G L L E ++
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDV-VLILELVSGGELFDFLAEKESLTEDEATQFLK 136
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
++ G+ +LHS + H D+KP+N+ L D + L +FG IA EA
Sbjct: 137 QILD-----GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG-----IAHKIEAG 186
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 187 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 233
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain Kinase
Loc340156
Length = 373
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 844 VLSRGRYGLIFKAS-YQDGMVLSIRRLRD-GTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
+L GR+G + K G+ L+ + ++ G D+ + E + ++ H NL L +
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVH 961
D+ +LV +Y+ G L + + S+ L L + G+ +H + ++H
Sbjct: 156 ESKNDI-VLVMEYVDGGELFDRIIDESYN----LTELDTILFMKQICEGIRHMHQMYILH 210
Query: 962 GDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQP 1018
D+KP+N+L DA + + +FGL R P E G+ +++PE +
Sbjct: 211 LDLKPENILCVNRDAK-QIKIIDFGLARR--YKPRE--KLKVNFGTPEFLAPEVVNYDFV 265
Query: 1019 TKEADVYSFGIVLLEILTGRKPVMFTQD 1046
+ D++S G++ +L+G P + D
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDND 293
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 42/260 (16%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
V L L + +N L P + N + LV + +N + + P + ++ L L+L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 269 SRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIR 328
N++T + P+ N+++L ++L N + + ++ L+ L +N++
Sbjct: 115 FNNQITDIDPLK-------NLTNLNRLELSSNTISDISAL---SGLTSLQQLSFSSNQVT 164
Query: 329 AVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVP-------D 381
+ P L N+T+L +D+S N S + + L LE L NN +S + P D
Sbjct: 165 DLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITPLGILTNLD 220
Query: 382 EI-------------AKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIP 428
E+ A + L DL N+ S P L G+ L + LG N S + P
Sbjct: 221 ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 278
Query: 429 LSFGNLSQLETLNLSENDIR 448
L L+ L L L+EN +
Sbjct: 279 L--AGLTALTNLELNENQLE 296
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 159/363 (43%), Gaps = 35/363 (9%)
Query: 260 ISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEV 319
++ L ++ S N+LT + P+ N++ L + + N + N ++ L
Sbjct: 62 LNNLTQINFSNNQLTDITPLK-------NLTKLVDILMNNNQIADITPLAN---LTNLTG 111
Query: 320 LDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLV 379
L L NN+I + P L N+T+L ++LS N S +A+ L L+ L ++N ++ L
Sbjct: 112 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLK 167
Query: 380 PDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLET 439
P +A + L+ D+ N+ S + L + L+ + N S + PL G L+ L+
Sbjct: 168 P--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITPL--GILTNLDE 221
Query: 440 LNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGKI 499
L+L+ N ++ + N+ P A+ S
Sbjct: 222 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNIS 277
Query: 500 PGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQY 559
P + L LT L+L+ L PI L +L ++L NN+S P SSL LQ
Sbjct: 278 P--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQR 331
Query: 560 LNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNI 619
L +N + D+ ++ L ++ +LS HNQIS + P L + + L L +T N
Sbjct: 332 LFFYNNKVS-DV-SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT-NA 386
Query: 620 PVD 622
PV+
Sbjct: 387 PVN 389
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 50/279 (17%)
Query: 166 SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL 225
SL+ L SSN T P ++ + L+ +++S N S + + +L LE L +N +
Sbjct: 152 SLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQI 207
Query: 226 YGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNL 285
P I ++L LS N LK + GT+ ++ L L L+ N+++ L P+S L
Sbjct: 208 SDITPLGI--LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGL--- 260
Query: 286 WGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMD 345
+ L ++LG N + + P G ++ L L+L N++ + P ++N+ +L +
Sbjct: 261 ----TKLTELKLGANQISN-ISPLAG--LTALTNLELNENQLEDISP--ISNLKNLTYLT 311
Query: 346 LSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPA 405
L N S P V SL KL+ L NN +S + +
Sbjct: 312 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--------------------------S 343
Query: 406 FLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSE 444
L + + +S G N S L PL NL+++ L L++
Sbjct: 344 SLANLTNINWLSAGHNQISDLTPL--ANLTRITQLGLND 380
Score = 37.4 bits (85), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 506 LMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDN 565
L LT ++ SN L+ P++ L L + + N ++ P ++L L L L +N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 566 AFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISH 625
T P L +L L LS N IS + + L ++L+ L SN T P +++
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LAN 171
Query: 626 LSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIP 668
L+ +++LD+ NK+S ++K ++L SL N +S P
Sbjct: 172 LTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 212
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIK 965
D V +Y+ G+L +Q+ P + ++ GL FLH +++ D+K
Sbjct: 93 DRLYFVMEYVNGGDLMYHIQQVGK-----FKEPQAVFYAAEISIGLFFLHKRGIIYRDLK 147
Query: 966 PQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVY 1025
NV+ D++ +++FG+ + + + ++ G+ Y++PE + K D +
Sbjct: 148 LDNVMLDSEGHIKIADFGMCKEHM---MDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWW 204
Query: 1026 SFGIVLLEILTGRKPVMFTQDED 1048
++G++L E+L G+ P +DED
Sbjct: 205 AYGVLLYEMLAGQPP-FDGEDED 226
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
+ + L++LH+ ++H DIK ++L D LS+FG + +G+
Sbjct: 149 AVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFG---FCAQISKDVPKRKXLVGTP 205
Query: 1006 GYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+++PE S E D++S GI+++E++ G P
Sbjct: 206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L + DV +L+ + + G L L E ++
Sbjct: 64 REVNILREIRHPNIITLHDIFENKTDV-VLILELVSGGELFDFLAEKESLTEDEATQFLK 122
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
++ G+ +LHS + H D+KP+N+ L D + L +FG IA EA
Sbjct: 123 QILD-----GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG-----IAHKIEAG 172
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 173 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN----GNLATLLQEASHQDG 932
T+R E L +KH N+ L + + Y+ +L +++ + D
Sbjct: 73 RTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDE 131
Query: 933 HVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992
HV + L RGL ++HS ++H D+KP NV + D E + +FGL R A
Sbjct: 132 HV------QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA---- 181
Query: 993 AEASSSTTPIGSLGYVSPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
T + + Y +PE + + D++S G ++ E+L G+
Sbjct: 182 --DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ P + + +LHSLD+++ D+KP+N+
Sbjct: 111 MVMEYVPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 165
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 166 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 1030 VLLEILTGRKPVMFTQ 1045
++ E+ G P Q
Sbjct: 220 LIYEMAAGYPPFFADQ 235
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ + P +G+ +LH+ ++H D+K N+ + D + + +FG LA
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG---LA 189
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ T G+ Y++PE + E D++S G +L +L G+ P
Sbjct: 190 TKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein
Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 139 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 193
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + ++ T G+ Y++PE + K D ++ G+
Sbjct: 194 LIDQQGYIQVTDFGFAKRV------KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 1030 VLLEILTGRKPVMFTQ 1045
++ E+ G P Q
Sbjct: 248 LIYEMAAGYPPFFADQ 263
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 845 LSRGRYGLIFKASYQ-----DGMVLSIRRLRDGTIDE--NTFRKEAEALGKVKHRNLTVL 897
L G +G + Y G +++++ L++G + + +++E E L + H ++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 898 RGYY--AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
+G G V+L V +Y+P G+L L H + L + + G+++LH
Sbjct: 76 KGCCEDQGEKSVQL-VMEYVPLGSLRDYLPR------HCVGLAQLLLFAQQICEGMAYLH 128
Query: 956 SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE----ASSSTTPIGSLGYVSPE 1011
+ +H + +NVL D D + +FGL + A+ E +P+ + +PE
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPV---FWYAPE 184
Query: 1012 AASTGQPTKEADVYSFGIVLLEILT 1036
+ +DV+SFG+ L E+LT
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 845 LSRGRYGLIFKASYQ-----DGMVLSIRRLRDGTIDE--NTFRKEAEALGKVKHRNLTVL 897
L G +G + Y G +++++ L++G + + +++E E L + H ++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 898 RGYY--AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH 955
+G G V+L V +Y+P G+L L H + L + + G+++LH
Sbjct: 77 KGCCEDQGEKSVQL-VMEYVPLGSLRDYLPR------HCVGLAQLLLFAQQICEGMAYLH 129
Query: 956 SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE----ASSSTTPIGSLGYVSPE 1011
+ +H + +NVL D D + +FGL + A+ E +P+ + +PE
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPV---FWYAPE 185
Query: 1012 AASTGQPTKEADVYSFGIVLLEILT 1036
+ +DV+SFG+ L E+LT
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDEN--TFRKEAEALGKVKHRNLTVLRGYYA 902
L G +G ++KA ++ VL+ ++ D +E + E + L H N+ L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962
++ +L+ ++ G + ++ E L ++ L++LH ++H
Sbjct: 105 YENNLWILI-EFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA----ASTGQP 1018
D+K N+LF D + L++FG ++ IG+ +++PE S +P
Sbjct: 160 DLKAGNILFTLDGDIKLADFG---VSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 1019 TK-EADVYSFGIVLLEILTGRKP 1040
+ADV+S GI L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 845 LSRGRYGLIFKASYQD-GMVLSIRR--LRDGTIDENTFRKEAEALGKVKHRNLTVL-RGY 900
+ G G++ A+ + G ++++++ LR E F E + +H N+ + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 217
Query: 901 YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960
G D +V +++ G L ++ + + + L + + LS LH+ ++
Sbjct: 218 LVG--DELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQGVI 269
Query: 961 HGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTK 1020
H DIK ++L D LS+FG E +G+ +++PE S
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 1021 EADVYSFGIVLLEILTGRKP 1040
E D++S GI+++E++ G P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1012
Length = 351
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A Small
Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of
Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase (Pka)
In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N-
Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FGL + + G+ Y++PE + K D ++ G+
Sbjct: 173 MIDQQGYIQVTDFGLAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 16/217 (7%)
Query: 838 QFDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHR 892
+F+ +L +G +G +I G +++ L+ I DE E L +H
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 893 NLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ Y D V +Y G L L V + + L
Sbjct: 209 FLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALD 262
Query: 953 FLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011
+LHS ++V+ D+K +N++ D D +++FGL + I + ++ T G+ Y++PE
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKTFCGTPEYLAPE 319
Query: 1012 AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 355
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor
Length = 446
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 16/217 (7%)
Query: 838 QFDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHR 892
+F+ +L +G +G +I G +++ L+ I DE E L +H
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 211
Query: 893 NLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ Y D V +Y G L L V + + L
Sbjct: 212 FLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALD 265
Query: 953 FLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011
+LHS ++V+ D+K +N++ D D +++FGL + I + ++ T G+ Y++PE
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKTFCGTPEYLAPE 322
Query: 1012 AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 358
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ +GL ++HS +VH D+KP N+ + D E + +FGL R A A T + +
Sbjct: 153 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA------EMTGYVVTRW 206
Query: 1007 YVSPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
Y +PE S + D++S G ++ E+LTG+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ +GL ++HS +VH D+KP N+ + D E + +FGL R A A T + +
Sbjct: 135 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA------EMTGYVVTRW 188
Query: 1007 YVSPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
Y +PE S + D++S G ++ E+LTG+
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 838 QFDEENVLSRGRYGLIFKASYQDGMV------LSIRRLRDGTIDENTFRKEAEALGKVKH 891
+FD E + RG + ++K + V L R+L + F++EAE L ++H
Sbjct: 29 KFDIE--IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS--ERQRFKEEAEXLKGLQH 84
Query: 892 RNLTVLRGYYAGPPDVR-----LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLG 946
N ++R Y + V+ +LV + +G L T L+ VL R ++
Sbjct: 85 PN--IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL--- 139
Query: 947 LARGLSFLHSLD--MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004
+GL FLH+ ++H D+K N+ + L +AT AS + IG+
Sbjct: 140 --KGLQFLHTRTPPIIHRDLKCDNIFITGP----TGSVKIGDLGLATLKRASFAKAVIGT 193
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +PE + + DVY+FG LE T P
Sbjct: 194 PEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 320 LDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLV 379
L+L++N+I + P L N+T + ++LSGN +A+ L ++ L + + ++ +
Sbjct: 74 LELKDNQITDLTP--LKNLTKITELELSGNPLKN--VSAIAGLQSIKTLDLTSTQITDVT 129
Query: 380 PDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLET 439
P +A S LQ+ L+ N+ + P L G+ L+ +S+G N + L PL+ NLS+L T
Sbjct: 130 P--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTPLA--NLSKLTT 183
Query: 440 LNLSENDI 447
L +N I
Sbjct: 184 LRADDNKI 191
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 531 PSLQVVSLEENNLSGDVPEGFSSLVGLQ---YLNLSDNAFTGDIPATYGFLRSLVFLSLS 587
P + + E LSG+ + S++ GLQ L+L+ T P L +L L L
Sbjct: 86 PLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLD 143
Query: 588 HNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEI 647
NQI+ + P L + L+ L + +N P +++LS++ L NK+S P +
Sbjct: 144 LNQITNISP--LAGLTNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISP--L 197
Query: 648 SKCSSLVSLTLDMNSLSGRIP 668
+ +L+ + L N +S P
Sbjct: 198 ASLPNLIEVHLKDNQISDVSP 218
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FGL + + G+ Y++PE + K D ++ G+
Sbjct: 173 MIDQQGYIKVTDFGLAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 165/416 (39%), Gaps = 88/416 (21%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
V L L + +N L P + N + LV + +N + + P + ++ L L+L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 269 SRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQN--NR 326
N++T + P+ N+++L ++L N + + +S L L N N+
Sbjct: 115 FNNQITDIDPLK-------NLTNLNRLELSSNTISDI------SALSGLTSLQQLNFGNQ 161
Query: 327 IRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKC 386
+ + P L N+T+L +D+S N S + + L LE L NN +S + P +
Sbjct: 162 VTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGIL 215
Query: 387 SLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSEND 446
+ L L GN+ L + L + L N S L PLS L++L L L N
Sbjct: 216 TNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQ 271
Query: 447 IRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGKIPGSIGSL 506
I P + L
Sbjct: 272 ISNISP--------------------------------------------------LAGL 281
Query: 507 MRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNA 566
LT L+L+ L PI L +L ++L NN+S P SSL LQ L S+N
Sbjct: 282 TALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNK 337
Query: 567 FTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVD 622
+ D+ ++ L ++ +LS HNQIS + P L + + L L +T N PV+
Sbjct: 338 VS-DV-SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT-NAPVN 388
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 506 LMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDN 565
L LT ++ SN L+ P++ L L + + N ++ P ++L L L L +N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 566 AFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISH 625
T P L +L L LS N IS + + L ++L+ L N T P +++
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNF-GNQVTDLKP--LAN 170
Query: 626 LSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIP 668
L+ +++LD+ NK+S ++K ++L SL N +S P
Sbjct: 171 LTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 211
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex
With Small Molecular Inhibitors
Length = 278
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 882 EAEALGKVKHRNLTVLRGYYA--GPPDVRLLVYDYMPNGNLATLLQEA------------ 927
E L +V H ++ L G + GP LL+ +Y G+L L+E+
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGP---LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 928 -------SHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978
H D L M LIS +++G+ +L + +VH D+ +N+L +
Sbjct: 133 SRNSSSLDHPDERALT--MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK 190
Query: 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+S+FGL R + S I + +++ E+ T ++DV+SFG++L EI+T
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 882 EAEALGKVKHRNLTVLRGYYA--GPPDVRLLVYDYMPNGNLATLLQEA------------ 927
E L +V H ++ L G + GP LL+ +Y G+L L+E+
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGP---LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 928 -------SHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978
H D L M LIS +++G+ +L + +VH D+ +N+L +
Sbjct: 133 SRNSSSLDHPDERALT--MGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMK 190
Query: 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+S+FGL R + S I + +++ E+ T ++DV+SFG++L EI+T
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors
In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor
Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A-
443654
Length = 351
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+P G + + L+ P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 29/253 (11%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
V L L + +N L P + N + LV + +N + + P + ++ L L+L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 114
Query: 269 SRNELTGLVPVSVLCNL---------WGNISSLR----IVQLGFNAFTGVVKPPNGRCVS 315
N++T + P+ L NL +IS+L + QL F +KP ++
Sbjct: 115 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPL--ANLT 172
Query: 316 VLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSL 375
LE LD+ +N++ + S L +T+L + + N S P +G L L+ L + N L
Sbjct: 173 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL 228
Query: 376 SGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLS 435
+ +A + L DL N+ S P L G+ L + LG N S + PL L+
Sbjct: 229 KDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL--AGLT 282
Query: 436 QLETLNLSENDIR 448
L L L+EN +
Sbjct: 283 ALTNLELNENQLE 295
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 157/363 (43%), Gaps = 36/363 (9%)
Query: 260 ISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEV 319
++ L ++ S N+LT + P+ N++ L + + N + N ++ L
Sbjct: 62 LNNLTQINFSNNQLTDITPLK-------NLTKLVDILMNNNQIADITPLAN---LTNLTG 111
Query: 320 LDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLV 379
L L NN+I + P L N+T+L ++LS N S +A+ L L+ L N ++ L
Sbjct: 112 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFGN-QVTDLK 166
Query: 380 PDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLET 439
P +A + L+ D+ N+ S + L + L+ + N S + PL G L+ L+
Sbjct: 167 P--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITPL--GILTNLDE 220
Query: 440 LNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGKI 499
L+L+ N ++ + N+ P A+ S
Sbjct: 221 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNIS 276
Query: 500 PGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQY 559
P + L LT L+L+ L PI L +L ++L NN+S P SSL LQ
Sbjct: 277 P--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDISP--VSSLTKLQR 330
Query: 560 LNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNI 619
L +N + D+ ++ L ++ +LS HNQIS + P L + + L L +T N
Sbjct: 331 LFFYNNKVS-DV-SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT-NA 385
Query: 620 PVD 622
PV+
Sbjct: 386 PVN 388
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 46/236 (19%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
+ +L LE L +N + P I ++L LS N LK + GT+ ++ L L L
Sbjct: 190 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 245
Query: 269 SRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIR 328
+ N+++ L P+S L + L ++LG N + + P G ++ L L+L N++
Sbjct: 246 ANNQISNLAPLSGL-------TKLTELKLGANQISN-ISPLAG--LTALTNLELNENQLE 295
Query: 329 AVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSL 388
+ P ++N+ +L + L N S P V SL KL+ L NN +S +
Sbjct: 296 DISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV---------- 341
Query: 389 LQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSE 444
+ L + + +S G N S L PL NL+++ L L++
Sbjct: 342 ----------------SSLANLTNINWLSAGHNQISDLTPL--ANLTRITQLGLND 379
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 506 LMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDN 565
L LT ++ SN L+ P++ L L + + N ++ P ++L L L L +N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 566 AFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISH 625
T P L +L L LS N IS + + L ++L+ L N T P +++
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNF-GNQVTDLKP--LAN 170
Query: 626 LSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIP 668
L+ +++LD+ NK+S ++K ++L SL N +S P
Sbjct: 171 LTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 211
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 29/253 (11%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
V L L + +N L P + N + LV + +N + + P + ++ L L+L
Sbjct: 64 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119
Query: 269 SRNELTGLVPVSVLCNL---------WGNISSLR----IVQLGFNAFTGVVKPPNGRCVS 315
N++T + P+ L NL +IS+L + QL F +KP ++
Sbjct: 120 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPL--ANLT 177
Query: 316 VLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSL 375
LE LD+ +N++ + S L +T+L + + N S P +G L L+ L + N L
Sbjct: 178 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL 233
Query: 376 SGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLS 435
+ +A + L DL N+ S P L G+ L + LG N S + PL+ L+
Sbjct: 234 KDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLA--GLT 287
Query: 436 QLETLNLSENDIR 448
L L L+EN +
Sbjct: 288 ALTNLELNENQLE 300
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 153/375 (40%), Gaps = 70/375 (18%)
Query: 289 ISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSG 348
+++L+ +LG + GV ++ L ++ NN++ + P L N+T L + ++
Sbjct: 48 VTTLQADRLGIKSIDGV------EYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNN 99
Query: 349 NFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLG 408
N + P A +L L L + NN ++ + D + + L +L N S + L
Sbjct: 100 NQIADITPLA--NLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD--ISALS 153
Query: 409 GIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRXXXXXXXXXXY 468
G+ L+ +S G N + L PL+ NL+ LE L++S N + + +
Sbjct: 154 GLTSLQQLSFG-NQVTDLKPLA--NLTTLERLDISSNKVSD--ISVLAKLTNLESLIATN 208
Query: 469 NKFGGKVPYDXXXXXXXXXXXXSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIE-- 526
N+ P S +G K G++ SL LT LDL+N +S P+
Sbjct: 209 NQISDITPL----GILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGL 264
Query: 527 ------------------LFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYL-----NLS 563
L GL +L + L EN L P S+L L YL N+S
Sbjct: 265 TKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS 322
Query: 564 D----------------NAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEV 607
D N D+ ++ L ++ +LS HNQIS + P L + +
Sbjct: 323 DISPVSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP--LANLTRITQ 379
Query: 608 LELRSNHFTGNIPVD 622
L L +T N PV+
Sbjct: 380 LGLNDQAWT-NAPVN 393
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 46/236 (19%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
+ +L LE L +N + P I ++L LS N LK + GT+ ++ L L L
Sbjct: 195 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 250
Query: 269 SRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIR 328
+ N+++ L P+S L + L ++LG N + + P G ++ L L+L N++
Sbjct: 251 ANNQISNLAPLSGL-------TKLTELKLGANQISN-ISPLAG--LTALTNLELNENQLE 300
Query: 329 AVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSL 388
+ P ++N+ +L + L N S P V SL KL+ L NN +S +
Sbjct: 301 DISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV---------- 346
Query: 389 LQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSE 444
+ L + + +S G N S L PL+ NL+++ L L++
Sbjct: 347 ----------------SSLANLTNINWLSAGHNQISDLTPLA--NLTRITQLGLND 384
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 506 LMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDN 565
L LT ++ SN L+ P++ L L + + N ++ P ++L L L L +N
Sbjct: 67 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122
Query: 566 AFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRS--NHFTGNIPVDI 623
T P L +L L LS N IS ++ A S L L+ S N T P +
Sbjct: 123 QITDIDP--LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSFGNQVTDLKP--L 173
Query: 624 SHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIP 668
++L+ +++LD+ NK+S ++K ++L SL N +S P
Sbjct: 174 ANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 216
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 29/253 (11%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
V L L + +N L P + N + LV + +N + + P + ++ L L+L
Sbjct: 63 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 118
Query: 269 SRNELTGLVPVSVLCNL---------WGNISSLR----IVQLGFNAFTGVVKPPNGRCVS 315
N++T + P+ L NL +IS+L + QL F +KP ++
Sbjct: 119 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPL--ANLT 176
Query: 316 VLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSL 375
LE LD+ +N++ + S L +T+L + + N S P +G L L+ L + N L
Sbjct: 177 TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL 232
Query: 376 SGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLS 435
+ +A + L DL N+ S P L G+ L + LG N S + PL+ L+
Sbjct: 233 KDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLA--GLT 286
Query: 436 QLETLNLSENDIR 448
L L L+EN +
Sbjct: 287 ALTNLELNENQLE 299
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 46/236 (19%)
Query: 209 VGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSL 268
+ +L LE L +N + P I ++L LS N LK + GT+ ++ L L L
Sbjct: 194 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 249
Query: 269 SRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIR 328
+ N+++ L P+S L + L ++LG N + + P G ++ L L+L N++
Sbjct: 250 ANNQISNLAPLSGL-------TKLTELKLGANQISN-ISPLAG--LTALTNLELNENQLE 299
Query: 329 AVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSL 388
+ P ++N+ +L + L N S P V SL KL+ L ANN +S +
Sbjct: 300 DISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV---------- 345
Query: 389 LQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSE 444
+ L + + +S G N S L PL+ NL+++ L L++
Sbjct: 346 ----------------SSLANLTNINWLSAGHNQISDLTPLA--NLTRITQLGLND 383
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 506 LMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDN 565
L LT ++ SN L+ P++ L L + + N ++ P ++L L L L +N
Sbjct: 66 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 121
Query: 566 AFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRS--NHFTGNIPVDI 623
T P L +L L LS N IS ++ A S L L+ S N T P +
Sbjct: 122 QITDIDP--LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSFGNQVTDLKP--L 172
Query: 624 SHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIP 668
++L+ +++LD+ NK+S ++K ++L SL N +S P
Sbjct: 173 ANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex With
Amppcp-Mg
Length = 285
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 870 RDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASH 929
R IDEN ++E ++H N+ + P + +++ +Y G L + A
Sbjct: 55 RGAAIDENV-QREIINHRSLRHPNIVRFKEVILTPTHLAIIM-EYASGGELYERICNAGR 112
Query: 930 QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLS--EFGLDRL 987
+ + L+S G+S+ HS+ + H D+K +N L D L +FG +
Sbjct: 113 FSEDEARFFFQQLLS-----GVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMFTQD 1046
++ S + +G+ Y++PE + K ADV+S G+ L +L G P +D
Sbjct: 168 SVL----HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF---ED 220
Query: 1047 EDIVKWVKKQLQR 1059
+ + +K +QR
Sbjct: 221 PEEPRDYRKTIQR 233
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
Length = 314
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 882 EAEALGKVKHRNLTVLRGYYA--GPPDVRLLVYDYMPNGNLATLLQEA------------ 927
E L +V H ++ L G + GP LL+ +Y G+L L+E+
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGP---LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 928 -------SHQDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978
H D L M LIS +++G+ +L + +VH D+ +N+L +
Sbjct: 133 SRNSSSLDHPDERALT--MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK 190
Query: 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+S+FGL R + S I + +++ E+ T ++DV+SFG++L EI+T
Sbjct: 191 ISDFGLSRDVYEEDSYVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 880 RKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPM 939
+E L +++H N+ L Y DV +L+ + + G L L E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEA 995
+ +++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 121 KQILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDF 170
Query: 996 SSSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In
Complex With Amppnp And Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRD------------GTIDENTFRK 881
AT +++ + G YG ++KA G ++++ +R T+ E +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 882 EAEALGKVKHRNLTVLRGYYAGPPDVR----LLVYDYMPNGNLATLLQEASHQ--DGHVL 935
EA +H N+ L A R LV++++ + +L T L +A +
Sbjct: 67 RLEAF---EHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETI 122
Query: 936 NWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995
MR + RGL FLH+ +VH D+KP+N+L + L++FGL R+ +
Sbjct: 123 KDLMRQFL-----RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQ 173
Query: 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE 1047
+ T + +L Y +PE D++S G + E+ RKP+ E
Sbjct: 174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSE 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain With Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death
Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
+ + H +VH D+KP+N+L D +++FGL + + + T GS Y +
Sbjct: 115 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAA 170
Query: 1010 PEAASTG-QPTKEADVYSFGIVLLEILTGRKP 1040
PE S E DV+S G++L +L R P
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
+ + H +VH D+KP+N+L D +++FGL + + + T GS Y +
Sbjct: 125 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAA 180
Query: 1010 PEAASTG-QPTKEADVYSFGIVLLEILTGRKP 1040
PE S E DV+S G++L +L R P
Sbjct: 181 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
+ + H +VH D+KP+N+L D +++FGL + + + T GS Y +
Sbjct: 124 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAA 179
Query: 1010 PEAASTG-QPTKEADVYSFGIVLLEILTGRKP 1040
PE S E DV+S G++L +L R P
Sbjct: 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic Domain
Of Death-Associated Protein Kinase With Atp Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 120
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 121 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 170
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound
Inhibitor Fragment
Length = 293
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFLAEKESLTEEEATEFLK 120
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 121 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 170
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
+ + H +VH D+KP+N+L D +++FGL + + + T GS Y +
Sbjct: 119 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAA 174
Query: 1010 PEAASTG-QPTKEADVYSFGIVLLEILTGRKP 1040
PE S E DV+S G++L +L R P
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
L +G+ +LH ++H DIKP N+L D +++FG+ + A S++ +G+
Sbjct: 146 LIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT---VGTPA 202
Query: 1007 YVSPEAASTGQPT---KEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050
+++PE+ S + K DV++ G+ L + G+ P M DE I+
Sbjct: 203 FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM---DERIM 246
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
562
Length = 301
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ + P +G+ +LH+ ++H D+K N+ + D + + +FG LA
Sbjct: 117 HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG---LA 173
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ G+ Y++PE + E D++S G +L +L G+ P
Sbjct: 174 TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVLEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 LIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A
Putative Auto-Inhibition State
Length = 340
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 943 ISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA-SSSTT 1000
I++ + + L LHS L ++H D+KP NVL +A + + +FG+ + + A+ +
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCK 217
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
P + ++PE G K +D++S GI ++E+ R P
Sbjct: 218 PYMAPERINPELNQKGYSVK-SDIWSLGITMIELAILRFP 256
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 MIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1)
Length = 294
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 97/221 (43%), Gaps = 16/221 (7%)
Query: 823 FNNKITYVETLEATRQFDEENVLSRGRYGLIFKA---SYQDGMVLSIRRLRDGTIDENTF 879
F N+ + V+ E + D + +G +G ++K ++ + + I L + +
Sbjct: 8 FANQHSRVDPEELFTKLDR---IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI 64
Query: 880 RKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPM 939
++E L + +T G Y + ++ +Y+ G+ LL+ ++ ++
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKL-WIIMEYLGGGSALDLLKPGPLEETYIAT--- 120
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
I + +GL +LHS +H DIK NVL + L++FG+ T + +
Sbjct: 121 ---ILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF- 176
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+G+ +++PE +AD++S GI +E+ G P
Sbjct: 177 --VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 24/226 (10%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTIDE----NTFRKEA--EALG 887
AT +++ + G YG ++KA G ++++ +R +E +T R+ A L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 888 KVKHRNLTVLRGYYAGPPDVR----LLVYDYMPNGNLATLLQEASHQ--DGHVLNWPMRH 941
+H N+ L A R LV++++ + +L T L +A + MR
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 942 LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
+ RGL FLH+ +VH D+KP+N+L + L++FGL R+ A T
Sbjct: 121 FL-----RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVT- 174
Query: 1002 IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE 1047
L Y +PE D++S G + E+ RKP+ E
Sbjct: 175 ---LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSE 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 836 TRQFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDE------NTFRKEAEALGK 888
+++++ + L G++ ++KA ++ +++I++++ G E T +E + L +
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 889 VKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLA 948
+ H N+ L + ++ L V+D+M +L ++++ S VL L
Sbjct: 69 LSHPNIIGLLDAFGHKSNISL-VFDFM-ETDLEVIIKDNSL----VLTPSHIKAYMLMTL 122
Query: 949 RGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008
+GL +LH ++H D+KP N+L D + L++FGL + + +P A + + Y
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK-SFGSPNRAYXHQ--VVTRWYR 179
Query: 1009 SPEAASTGQPTK-EADVYSFGIVLLEIL 1035
+PE + D+++ G +L E+L
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 320 LDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLV 379
L+L++N+I + P L N+T + ++LSGN +A+ L ++ L + + ++ +
Sbjct: 68 LELKDNQITDLAP--LKNLTKITELELSGNPLKN--VSAIAGLQSIKTLDLTSTQITDVT 123
Query: 380 PDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLET 439
P +A S LQ+ L+ N+ + P L G+ L+ +S+G S L PL+ NLS+L T
Sbjct: 124 P--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLA--NLSKLTT 177
Query: 440 LNLSENDI 447
L +N I
Sbjct: 178 LKADDNKI 185
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 27/138 (19%)
Query: 531 PSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQ 590
P + + E LSG+ + S++ GLQ S+ L L+ Q
Sbjct: 80 PLKNLTKITELELSGNPLKNVSAIAGLQ---------------------SIKTLDLTSTQ 118
Query: 591 ISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKC 650
I+ + P L S L+VL L N T P ++ L+ ++ L +G ++S P ++
Sbjct: 119 ITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANL 172
Query: 651 SSLVSLTLDMNSLSGRIP 668
S L +L D N +S P
Sbjct: 173 SKLTTLKADDNKISDISP 190
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 24/226 (10%)
Query: 835 ATRQFDEENVLSRGRYGLIFKA-SYQDGMVLSIRRLRDGTIDE----NTFRKEA--EALG 887
AT +++ + G YG ++KA G ++++ +R +E +T R+ A L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 888 KVKHRNLTVLRGYYAGPPDVR----LLVYDYMPNGNLATLLQEASHQ--DGHVLNWPMRH 941
+H N+ L A R LV++++ + +L T L +A + MR
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 942 LISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP 1001
+ RGL FLH+ +VH D+KP+N+L + L++FGL R+ A T
Sbjct: 121 FL-----RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVT- 174
Query: 1002 IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE 1047
L Y +PE D++S G + E+ RKP+ E
Sbjct: 175 ---LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSE 216
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ + P +G+ +LH+ ++H D+K N+ + D + + +FG LA
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG---LA 189
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ G+ Y++PE + E D++S G +L +L G+ P
Sbjct: 190 TKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLARGLSFLHSLDMVHGDIKP 966
V +Y+ G+L +Q P H S ++ L++LH +++ D+K
Sbjct: 129 FFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHERGIIYRDLKL 181
Query: 967 QNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYS 1026
NVL D++ L+++G+ + + P + +S T G+ Y++PE D ++
Sbjct: 182 DNVLLDSEGHIKLTDYGMCKEGL-RPGDTTS--TFCGTPNYIAPEILRGEDYGFSVDWWA 238
Query: 1027 FGIVLLEILTGRKP 1040
G+++ E++ GR P
Sbjct: 239 LGVLMFEMMAGRSP 252
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 40/231 (17%)
Query: 845 LSRGRYGLIFKASY---QDGMVLSIRRLRDGT--IDENTFRKEAEAL------------G 887
L G +G + + Y + + ++I+ L+ GT D +EA+ + G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 888 KVKHRNLTVLRGYYAGPPDVRLLV--YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL 945
+ L ++ G P + LV + +P N+A LL + S
Sbjct: 78 VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS----------------- 120
Query: 946 GLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
G+ +L + VH D+ +NVL A +S+FGL + A + ++ + L
Sbjct: 121 ---MGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 177
Query: 1006 GYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ +PE + + + +DV+S+G+ + E L+ G+KP + +++ ++++
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein Kinase
6 (Mapk6)
Length = 320
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +YM +LA +L++ + H L L RGL ++HS +++H D+KP N+
Sbjct: 99 IVQEYM-ETDLANVLEQGPLLEEHA------RLFMYQLLRGLKYIHSANVLHRDLKPANL 151
Query: 970 LFDA-DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE-AASTGQPTKEADVYSF 1027
+ D + +FGL R+ + + + + Y SP S TK D+++
Sbjct: 152 FINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA 211
Query: 1028 GIVLLEILTGR 1038
G + E+LTG+
Sbjct: 212 GCIFAEMLTGK 222
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With Compound
094
Length = 317
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 929 HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988
H+ + P +G+ +LH+ ++H D+K N+ + D + + +FG LA
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG---LA 189
Query: 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ G+ Y++PE + E D++S G +L +L G+ P
Sbjct: 190 TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5-
Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)
Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-(5-Methyl-
1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With (1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 MIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 MIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m,
Q181k) With Compound 27
Length = 351
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 MIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 MIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 859 QDGMVLSIRRLRDG-TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917
Q +++++ + G IDEN ++E ++H N+ + P + +V +Y
Sbjct: 41 QSNELVAVKYIERGEKIDENV-KREIINHRSLRHPNIVRFKEVILTPTHL-AIVMEYASG 98
Query: 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEA 977
G L + A + + LIS G+S+ H++ + H D+K +N L D
Sbjct: 99 GELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAMQVCHRDLKLENTLLDGSPAP 153
Query: 978 HLS--EFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEI 1034
L +FG + ++ S + +G+ Y++PE + K ADV+S G+ L +
Sbjct: 154 RLKICDFGYSKSSVL----HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 209
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQR 1059
L G P +D + K +K + R
Sbjct: 210 LVGAYPF---EDPEEPKNFRKTIHR 231
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 838 QFDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHR 892
+F+ +L +G +G +I G +++ L+ I DE E L +H
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 69
Query: 893 NLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ Y D V +Y G L L V + + L
Sbjct: 70 FLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALD 123
Query: 953 FLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011
+LHS ++V+ D+K +N++ D D +++FGL + I + ++ G+ Y++PE
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKXFCGTPEYLAPE 180
Query: 1012 AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 216
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide
And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 838 QFDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHR 892
+F+ +L +G +G +I G +++ L+ I DE E L +H
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 893 NLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ Y D V +Y G L L V + + L
Sbjct: 71 FLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALD 124
Query: 953 FLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011
+LHS ++V+ D+K +N++ D D +++FGL + I + ++ G+ Y++PE
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKXFCGTPEYLAPE 181
Query: 1012 AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 217
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F DE I
Sbjct: 227 LIYEMAAGYPP--FFADEPI 244
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 68/171 (39%), Gaps = 9/171 (5%)
Query: 492 ASGFSGKIPGSIGSLMRLTTLDLS-NQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEG 550
A+ F+G L L LDLS N L P GL L + L+ L P
Sbjct: 72 AAAFTG--------LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGL 123
Query: 551 FSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLEL 610
F L LQYL L DNA T+ L +L L L N+IS + +L+ L L
Sbjct: 124 FRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 183
Query: 611 RSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMN 661
N P L R+ L L N LS + ++ +L L L+ N
Sbjct: 184 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 285 LWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNN-RIRAVFPSWLTNVTSLRV 343
LW + S + ++ AFTG+ ++LE LDL +N ++R+V P+ + L
Sbjct: 60 LW--LHSNVLARIDAAAFTGL---------ALLEQLDLSDNAQLRSVDPATFHGLGRLHT 108
Query: 344 MDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQV 403
+ L P L L+ L + +N+L L D L L GNR S
Sbjct: 109 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 168
Query: 404 PAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEE 454
G+ L + L +N + + P +F +L +L TL L N++ +P E
Sbjct: 169 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTE 218
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 84/231 (36%), Gaps = 31/231 (13%)
Query: 192 QLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNV-LK 250
Q I L N S AS + L LWL SN L +A + + L L DN L+
Sbjct: 34 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 93
Query: 251 GLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPN 310
+ P T + L L L R L +LG F G+
Sbjct: 94 SVDPATFHGLGRLHTLHLDRCGLQ---------------------ELGPGLFRGL----- 127
Query: 311 GRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRV 370
+ L+ L LQ+N ++A+ ++ +L + L GN S A L L+ L +
Sbjct: 128 ----AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 183
Query: 371 ANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRN 421
N ++ + P L L N S L +R L+ + L N
Sbjct: 184 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 1/113 (0%)
Query: 167 LRYLDLSSNAFTGEI-PGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL 225
L LDLS NA + P F +L ++L P L L+YL+L N L
Sbjct: 81 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 140
Query: 226 YGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVP 278
+ +L HL N + + + +L L L +N + + P
Sbjct: 141 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 193
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAH----LSEFGLDRLAIATPAEASSSTTPI 1002
+ L++ HS +VH D+KP+N+LF D H + +FGL L + ST
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSD----EHSTNAA 187
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
G+ Y++PE T + D++S G+V+ +LTG P T E++
Sbjct: 188 GTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV 233
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase
Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 943 ISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA-EASSSTT 1000
I++ + + L LHS L ++H D+KP NVL +A + + +FG+ + A + +
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCK 173
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
P + ++PE G K +D++S GI ++E+ R P
Sbjct: 174 PYMAPERINPELNQKGYSVK-SDIWSLGITMIELAILRFP 212
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 68/171 (39%), Gaps = 9/171 (5%)
Query: 492 ASGFSGKIPGSIGSLMRLTTLDLS-NQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEG 550
A+ F+G L L LDLS N L P GL L + L+ L P
Sbjct: 73 AAAFTG--------LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGL 124
Query: 551 FSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLEL 610
F L LQYL L DNA T+ L +L L L N+IS + +L+ L L
Sbjct: 125 FRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184
Query: 611 RSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMN 661
N P L R+ L L N LS + ++ +L L L+ N
Sbjct: 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 285 LWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNN-RIRAVFPSWLTNVTSLRV 343
LW + S + ++ AFTG+ ++LE LDL +N ++R+V P+ + L
Sbjct: 61 LW--LHSNVLARIDAAAFTGL---------ALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109
Query: 344 MDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQV 403
+ L P L L+ L + +N+L L D L L GNR S
Sbjct: 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169
Query: 404 PAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEE 454
G+ L + L +N + + P +F +L +L TL L N++ +P E
Sbjct: 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTE 219
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 84/231 (36%), Gaps = 31/231 (13%)
Query: 192 QLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNV-LK 250
Q I L N S AS + L LWL SN L +A + + L L DN L+
Sbjct: 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94
Query: 251 GLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPN 310
+ P T + L L L R L +LG F G+
Sbjct: 95 SVDPATFHGLGRLHTLHLDRCGLQ---------------------ELGPGLFRGL----- 128
Query: 311 GRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRV 370
+ L+ L LQ+N ++A+ ++ +L + L GN S A L L+ L +
Sbjct: 129 ----AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184
Query: 371 ANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRN 421
N ++ + P L L N S L +R L+ + L N
Sbjct: 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 1/113 (0%)
Query: 167 LRYLDLSSNAFTGEI-PGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL 225
L LDLS NA + P F +L ++L P L L+YL+L N L
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 141
Query: 226 YGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVP 278
+ +L HL N + + + +L L L +N + + P
Sbjct: 142 QALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 838 QFDEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTI---DENTFR-KEAEALGKVKHR 892
+F+ +L +G +G +I G +++ L+ I DE E L +H
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 893 NLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLS 952
LT L+ Y D V +Y G L L V + + L
Sbjct: 69 FLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRARFYGAEIVSALD 122
Query: 953 FLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011
+LHS ++V+ D+K +N++ D D +++FGL + I + ++ G+ Y++PE
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK---DGATMKXFCGTPEYLAPE 179
Query: 1012 AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
+ D + G+V+ E++ GR P + QD +
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP-FYNQDHE 215
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +++H N+ L Y DV +L+ + + G L L E ++
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDV-ILIGELVAGGELFDFLAEKESLTEEEATEFLK 121
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
+++ G+ +LHSL + H D+KP+N+ L D + + +FGL A +
Sbjct: 122 QILN-----GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-----AHKIDFG 171
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 870 RDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASH 929
R IDEN ++E ++H N+ + P + +V +Y G L + A
Sbjct: 54 RGEKIDENV-KREIINHRSLRHPNIVRFKEVILTPTHL-AIVMEYASGGELFERICNAGR 111
Query: 930 QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHL--SEFGLDRL 987
+ + LIS G+S+ H++ + H D+K +N L D L ++FG +
Sbjct: 112 FSEDEARFFFQQLIS-----GVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA 166
Query: 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMFTQD 1046
++ S + +G+ Y++PE + K ADV+S G+ L +L G P +D
Sbjct: 167 SVLH----SQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF---ED 219
Query: 1047 EDIVKWVKKQLQR 1059
+ K +K + R
Sbjct: 220 PEEPKNFRKTIHR 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQ 1045
++ E+ G P Q
Sbjct: 227 LIYEMAAGYPPFFADQ 242
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp
Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12
An 193189
Length = 337
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 837 RQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTV 896
+Q + +GRYG ++ ++ G ++++ T +E ++ +E E V R+ +
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVF--FTTEEASWFRETEIYQTVLMRHENI 93
Query: 897 LRGYYAGPPDVR--------LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLA 948
L G+ A D++ L+ DY NG+L L+ + +L ++
Sbjct: 94 L-GFIAA--DIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK------LAYSSV 144
Query: 949 RGLSFLHSL--------DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS-SST 999
GL LH+ + H D+K +N+L + +++ GL I+ E
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 1000 TPIGSLGYVSPEAASTG------QPTKEADVYSFGIVLLEI 1034
T +G+ Y+ PE Q AD+YSFG++L E+
Sbjct: 205 TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 163/425 (38%), Gaps = 46/425 (10%)
Query: 261 STLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVL 320
S + VL+L+ N+L L P + + S L I+ GFN+ + + +P + + +L+VL
Sbjct: 25 SNITVLNLTHNQLRRLPPTN-----FTRYSQLAILDAGFNSISKL-EPELCQILPLLKVL 78
Query: 321 DLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVP 380
+LQ+N + + T+L +DL N + L L +++N LS
Sbjct: 79 NLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKL 138
Query: 381 DEIAKCSLLQMFDLEGNR---FSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQL 437
+ LQ L N+ + FLG L+ + L N P F + +L
Sbjct: 139 GTGVQLENLQELLLAKNKILALRSEELEFLGN-SSLRKLDLSSNPLKEFSPGCFQTIGKL 197
Query: 438 ETLNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSG 497
L L+ + ++ E++ S S FSG
Sbjct: 198 FALLLNNAQLNPHLTEKLCWEL-------------SNTSIQNLSLANNQLLATSESTFSG 244
Query: 498 KIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGL 557
LT LDLS NL LPSL+ +SLE NN+ P F L L
Sbjct: 245 L------KWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNL 298
Query: 558 QYLNLSDNAFTGDIPA----------TYGFLRSLVFLSLSHNQISGMIPAELGACSALEV 607
+YL+L AFT + ++ +L+ L +L++ N I +L+
Sbjct: 299 RYLSLK-RAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKY 357
Query: 608 LELRSNH-----FTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNS 662
L L T V ++H S + L+L +N +S S L L L +N
Sbjct: 358 LSLSKTFTSLQTLTNETFVSLAH-SPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNE 416
Query: 663 LSGRI 667
+ ++
Sbjct: 417 IEQKL 421
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 178/503 (35%), Gaps = 53/503 (10%)
Query: 159 ISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYL 218
I D+ ++ L+L+ N P NF+ SQL +++ +NS S P L L+ L
Sbjct: 19 IPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVL 78
Query: 219 WLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTG--- 275
L N L C++L L N + + L L LS N L+
Sbjct: 79 NLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKL 138
Query: 276 -------------------LVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSV 316
L S GN SSLR + L N P + +
Sbjct: 139 GTGVQLENLQELLLAKNKILALRSEELEFLGN-SSLRKLDLSSNPLKE-FSPGCFQTIGK 196
Query: 317 LEVLDLQNNRIRAVFPS---WLTNVTSLRVMDLSGNFFSGNLPAAVGSLD--KLEVLRVA 371
L L L N ++ W + TS++ + L+ N + L L L ++
Sbjct: 197 LFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLS 256
Query: 372 NNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPL-- 429
N+L + + L+ LE N P G+ L+ +SL R + L
Sbjct: 257 YNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLAS 316
Query: 430 -------SFGNLSQLETLNLSENDIRGNIPEEIT-----RXXXXXXXXXXYNKFGGKVPY 477
SF L LE LN+ +N+I T + + +
Sbjct: 317 HPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNET-F 375
Query: 478 DXXXXXXXXXXXXSASGFSGKIPGSIGSLMRLTTLDLS----NQNLSGELPIELFGLPSL 533
+ + S G+ L +L LDL Q LSG+ E GL ++
Sbjct: 376 VSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQ---EWRGLRNI 432
Query: 534 QVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTG-DI-PATYGFLRSLVFLSLSHNQI 591
+ L N F+ + LQ L L A DI P+ + LR+L L LS+N I
Sbjct: 433 FEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNI 492
Query: 592 SGMIPAELGACSALEVLELRSNH 614
+ + L LE+L+ + N+
Sbjct: 493 ANINEDLLEGLENLEILDFQHNN 515
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 139/339 (41%), Gaps = 70/339 (20%)
Query: 165 PSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPA----------SVGQLQE 214
PSLRYL L N P +F S L+ ++L +F+ + + S L+
Sbjct: 272 PSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLK-RAFTKQSVSLASHPNIDDFSFQWLKY 330
Query: 215 LEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNV--LKGLIPGTIGRI--STLQVLSLSR 270
LEYL +D N++ T + + SL +LS L+ L T + S L L+L++
Sbjct: 331 LEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTK 390
Query: 271 NELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCV-SVLEVLDLQNNRIR- 328
N ++ + + W + LRI+ LG N + R + ++ E+ N ++
Sbjct: 391 NHISKIANGTFS---W--LGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQL 445
Query: 329 -----AVFPSW---LTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVP 380
A+ PS + +L+ +D+S P+ L L +L ++NN+++ +
Sbjct: 446 STSSFALVPSLQRLMLRRVALKNVDIS--------PSPFRPLRNLTILDLSNNNIANINE 497
Query: 381 DEIAKCSLLQMFDLEGNRFS--------GQVPAFLGGIRGLKIVSLGRN--------MFS 424
D + L++ D + N + G FL G+ L I++L N +F
Sbjct: 498 DLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLDEIPVGVFK 557
Query: 425 GLI----------------PLSFGNLSQLETLNLSENDI 447
L P F + + L +LNL +N I
Sbjct: 558 NLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLI 596
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 155/427 (36%), Gaps = 87/427 (20%)
Query: 71 NRVRELRLPRLQLAGRLTDQLADLHELRKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNS 130
N++ LR L+ G LRKL L SN L P L A+ L
Sbjct: 155 NKILALRSEELEFLGN--------SSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQ 206
Query: 131 FSGHLPLSIFXXXXXXXXXXXXXXXSGKISADIS-PSLRYLDLSSNAFTGEIPGNFS--S 187
+ HL + K+ ++S S++ L L++N FS
Sbjct: 207 LNPHL--------------------TEKLCWELSNTSIQNLSLANNQLLATSESTFSGLK 246
Query: 188 KSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDN 247
+ L ++LSYN+ S L L YL L+ N++ P + S+L +LS +
Sbjct: 247 WTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRA 306
Query: 248 VLKGLI-----PG----TIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLG 298
K + P + + L+ L++ N +P S N + + SL+ + L
Sbjct: 307 FTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNN----IP-STKSNTFTGLVSLKYLSLS 361
Query: 299 FNAFTGVVKPPNGRCVSV----LEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGN 354
FT + N VS+ L L+L N I + + + LR++DL N
Sbjct: 362 -KTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQK 420
Query: 355 LP----------------------------AAVGSLDKLEVLRVANNSLSGLVPDEIAKC 386
L A V SL +L + RVA ++ + P
Sbjct: 421 LSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNV-DISPSPFRPL 479
Query: 387 SLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLI-------PLSF-GNLSQLE 438
L + DL N + L G+ L+I+ N + L P++F LS L
Sbjct: 480 RNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLH 539
Query: 439 TLNLSEN 445
LNL N
Sbjct: 540 ILNLESN 546
Score = 37.7 bits (86), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 185/487 (37%), Gaps = 74/487 (15%)
Query: 166 SLRYLDLSSNAFTGEIPGNFSSKSQL---QLINLSYNSFSGEVPASVGQLQELEYLWLDS 222
SLR LDLSSN PG F + +L L N N E ++ L L +
Sbjct: 172 SLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLAN 231
Query: 223 NHLYGTLPSAIS--NCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVS 280
N L T S S ++L L N L + G+ + +L+ LSL N + L P S
Sbjct: 232 NQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRS 291
Query: 281 VLCNLWGNISSLRIVQLGFNAFT----GVVKPPN-----GRCVSVLEVLDLQNNRIRAVF 331
+G +S+LR + L AFT + PN + + LE L++ +N I +
Sbjct: 292 ----FYG-LSNLRYLSLK-RAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTK 345
Query: 332 PSWLTNVTSLRVMDLSGNFFS------------GNLPAAVGSLDKLEVLRVANNSLSGLV 379
+ T + SL+ + LS F S + P +L K + ++AN + S L
Sbjct: 346 SNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLG 405
Query: 380 PDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLET 439
I L ++ + SGQ G+R + + L N + L SF + L+
Sbjct: 406 QLRILDLGLNEI----EQKLSGQE---WRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQR 458
Query: 440 LNLSENDIRG-NIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGK 498
L L ++ +I R N + D
Sbjct: 459 LMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDL------------------- 499
Query: 499 IPGSIGSLMRLTTLDLSNQNLSGEL-------PIELF-GLPSLQVVSLEENNLSGDVPEG 550
+ L L LD + NL+ P+ GL L +++LE N L ++P G
Sbjct: 500 ----LEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGL-DEIPVG 554
Query: 551 -FSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELG-ACSALEVL 608
F +L L+ +NL N P + SL L+L N I+ + G L L
Sbjct: 555 VFKNLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLITSVEKDVFGPPFQNLNSL 614
Query: 609 ELRSNHF 615
++R N F
Sbjct: 615 DMRFNPF 621
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 834 EATRQFDEENVLSRGRYGLIF----KASYQDGMVLSIRR---LRDGTIDENTFRK---EA 883
E ++++ + L G +G ++ K ++ +V I++ L D I++ K E
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 884 EALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLI 943
L +V+H N+ + + +L++ + +L + D + ++ R L+
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 944 SLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIG 1003
S + +L D++H DIK +N++ DF L +FG + A T G
Sbjct: 141 S-----AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG----SAAYLERGKLFYTFCG 191
Query: 1004 SLGYVSPEAASTGQPTK--EADVYSFGIVLLEILTGRKPVMFTQDEDIVK 1051
++ Y +PE G P + E +++S G+ L ++ P F + E+ V+
Sbjct: 192 TIEYCAPEVL-MGNPYRGPELEMWSLGVTLYTLVFEENP--FCELEETVE 238
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 837 RQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTV 896
RQ + +GRYG +++ + G ++++ + DE ++ +E E V R+ +
Sbjct: 8 RQVALVECVGKGRYGEVWRGLWH-GESVAVKIF--SSRDEQSWFRETEIYNTVLLRHDNI 64
Query: 897 LRGYYAGPPDVR------LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARG 950
L G+ A R L+ Y +G+L LQ + + L +++ A G
Sbjct: 65 L-GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR------LAVSAACG 117
Query: 951 LSFLH--------SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP- 1001
L+ LH + H D K +NVL ++ + +++ GL + P
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 1002 IGSLGYVSPEA------ASTGQPTKEADVYSFGIVLLEI 1034
+G+ Y++PE + K D+++FG+VL EI
Sbjct: 178 VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase
A (Pka)
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 MIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-Phenyl-C-(4-(
9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (1-(9h-Purin-6-
Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y P G + + L+ P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 MIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 955 HSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011
H + +VH D+KP+N+L + + L++FG LAI E + G+ GY+SPE
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFG---LAIEVEGEQQAWFGFAGTPGYLSPE 194
Query: 1012 AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
K D+++ G++L +L G P DED
Sbjct: 195 VLRKDPYGKPVDLWACGVILYILLVGYPPFW---DED 228
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRK---EAEALGKVKHRNL 894
+D + L +G + ++ + ++ G+ + + + + F+K EA K++H N+
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLL--------QEASHQDGHVLNWPMRHLISLG 946
L LV+D + G L + +ASH +L
Sbjct: 68 VRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---------- 116
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRLAIATPAEASSSTTPIG 1003
+++ HS +VH ++KP+N+L + + L++FGL + A + TP
Sbjct: 117 ---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP-- 171
Query: 1004 SLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
GY+SPE +K D+++ G++L +L G P DED
Sbjct: 172 --GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW---DED 211
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +V H N+ L Y DV +L+ + + G L L + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
++ G+++LH+ + H D+KP+N+ L D + L +FGL A E
Sbjct: 123 QILD-----GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL-----AHEIEDG 172
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRK---EAEALGKVKHRNL 894
+D + L +G + ++ + ++ G+ + + + + F+K EA K++H N+
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLL--------QEASHQDGHVLNWPMRHLISLG 946
L LV+D + G L + +ASH +L
Sbjct: 68 VRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---------- 116
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRLAIATPAEASSSTTPIG 1003
+++ HS +VH ++KP+N+L + + L++FGL + A + TP
Sbjct: 117 ---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP-- 171
Query: 1004 SLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
GY+SPE +K D+++ G++L +L G P DED
Sbjct: 172 --GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW---DED 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLARGLSFLHSLDMVHGDIKP 966
V +Y+ G+L +Q P H S ++ L++LH +++ D+K
Sbjct: 97 FFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHERGIIYRDLKL 149
Query: 967 QNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYS 1026
NVL D++ L+++G+ + + P + +S G+ Y++PE D ++
Sbjct: 150 DNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSXFC--GTPNYIAPEILRGEDYGFSVDWWA 206
Query: 1027 FGIVLLEILTGRKP 1040
G+++ E++ GR P
Sbjct: 207 LGVLMFEMMAGRSP 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRK---EAEALGKVKHRNL 894
+D + L +G + ++ + ++ G+ + + + + F+K EA K++H N+
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLL--------QEASHQDGHVLNWPMRHLISLG 946
L LV+D + G L + +ASH +L
Sbjct: 91 VRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---------- 139
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIG 1003
+++ HS +VH ++KP+N+L + + L++FGL + A + TP
Sbjct: 140 ---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP-- 194
Query: 1004 SLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
GY+SPE +K D+++ G++L +L G P DED
Sbjct: 195 --GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW---DED 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +V H N+ L Y DV +L+ + + G L L + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
++ G+++LH+ + H D+KP+N+ L D + L +FGL A E
Sbjct: 123 QILD-----GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL-----AHEIEDG 172
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein
Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ P + + +LHSLD+++ D+KP+N+
Sbjct: 139 MVMEYVAGGEMFSHLRRIGR-----FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 193
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 194 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 1030 VLLEILTGRKPVMFTQ 1045
++ E+ G P Q
Sbjct: 248 LIYEMAAGYPPFFADQ 263
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLARGLSFLHSLDMVHGDIKP 966
V +Y+ G+L +Q P H S ++ L++LH +++ D+K
Sbjct: 82 FFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHERGIIYRDLKL 134
Query: 967 QNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYS 1026
NVL D++ L+++G+ + + P + +S G+ Y++PE D ++
Sbjct: 135 DNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSXFC--GTPNYIAPEILRGEDYGFSVDWWA 191
Query: 1027 FGIVLLEILTGRKP 1040
G+++ E++ GR P
Sbjct: 192 LGVLMFEMMAGRSP 205
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +V H N+ L Y DV +L+ + + G L L + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
++ G+++LH+ + H D+KP+N+ L D + L +FGL A E
Sbjct: 123 QILD-----GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL-----AHEIEDG 172
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRH--LISLGLARGLSFLHSLDMVHGDIKP 966
V +Y+ G+L +Q P H S ++ L++LH +++ D+K
Sbjct: 86 FFVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHERGIIYRDLKL 138
Query: 967 QNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYS 1026
NVL D++ L+++G+ + + P + +S G+ Y++PE D ++
Sbjct: 139 DNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSXFC--GTPNYIAPEILRGEDYGFSVDWWA 195
Query: 1027 FGIVLLEILTGRKP 1040
G+++ E++ GR P
Sbjct: 196 LGVLMFEMMAGRSP 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRK---EAEALGKVKHRNL 894
+D + L +G + ++ + ++ G+ + + + + F+K EA K++H N+
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 66
Query: 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLL--------QEASHQDGHVLNWPMRHLISLG 946
L LV+D + G L + +ASH +L
Sbjct: 67 VRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---------- 115
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRLAIATPAEASSSTTPIG 1003
+++ HS +VH ++KP+N+L + + L++FGL + A + TP
Sbjct: 116 ---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP-- 170
Query: 1004 SLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED 1048
GY+SPE +K D+++ G++L +L G P DED
Sbjct: 171 --GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW---DED 210
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 859 QDGMVLSIRRLRDG-TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917
Q +++++ + G IDEN ++E ++H N+ + P + +V +Y
Sbjct: 42 QSNELVAVKYIERGEKIDENV-KREIINHRSLRHPNIVRFKEVILTPTHL-AIVMEYASG 99
Query: 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEA 977
G L + A + + LIS G+S+ H++ + H D+K +N L D
Sbjct: 100 GELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAMQVCHRDLKLENTLLDGSPAP 154
Query: 978 HLS--EFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEI 1034
L FG + ++ S + +G+ Y++PE + K ADV+S G+ L +
Sbjct: 155 RLKICAFGYSKSSVL----HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQR 1059
L G P +D + K +K + R
Sbjct: 211 LVGAYPF---EDPEEPKNFRKTIHR 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ +GL ++H+ ++H D+KP N+ + D E + +FGL R A S + +
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA------DSEMXGXVVTRW 190
Query: 1007 YVSPEAA-STGQPTKEADVYSFGIVLLEILTGR 1038
Y +PE + + T+ D++S G ++ E++TG+
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 881 KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMR 940
+E L +V H N+ L Y DV +L+ + + G L L + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 941 HLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAIATPAEAS 996
++ G+++LH+ + H D+KP+N+ L D + L +FGL A E
Sbjct: 123 QILD-----GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL-----AHEIEDG 172
Query: 997 SSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In
Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In
Complex With Indirubin E804
Length = 383
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDA-DFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005
L R + F+HSL + H DIKPQN+L ++ D L +FG + I P+E S + I S
Sbjct: 150 LFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI--PSEPSVAX--ICSR 205
Query: 1006 GYVSPE-AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVK 1054
Y +PE + T D++S G V E++ G+ +F+ + I + V+
Sbjct: 206 FYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP--LFSGETSIDQLVR 253
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL+ ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLSQVIQMELDHER-------MSYLLYQMLV-GIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G+++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ G V+F + I +W K Q G
Sbjct: 219 IKG--GVLFPGTDHIDQWNKVIEQLG 242
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 119 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 173
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 174 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 228 LIYEMAAGYPP--FFADQPI 245
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-dependent
Protein Kinase Complexed With A Phosphorylated Substrate
Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase Complexed
With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase Catalytic
Subunit Alpha In Complex With Peptide Inhibitor Pki Alpha
(6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent
Protein Kinase And Adenosine Further Defines
Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H89 Protein Kinase Inhibitor
N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H7 Protein Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic
Subunit In Complex With H8 Protein Kinase Inhibitor
[n-(2-Methylamino)ethyl]-5- Isoquinolinesulfonamide
Length = 350
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 105 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 159
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 160 LIDEQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 213
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 214 LIYEMAAGYPP--FFADQPI 231
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase
Catalytic Subunit
Length = 350
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL+ ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLSQVIQMELDHER-------MSYLLYQMLV-GIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G+++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ G V+F + I +W K Q G
Sbjct: 219 IKG--GVLFPGTDHIDQWNKVIEQLG 242
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEIL 1035
+ +FGL R T + T + + Y +PE + D++S G ++ E++
Sbjct: 164 TLKILDFGLAR----TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 1036 TGRKPVMFTQDEDIVKWVKKQLQRG 1060
G V+F + I +W K Q G
Sbjct: 220 KGG--VLFPGTDHIDQWNKVIEQLG 242
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Query: 845 LSRGRYGLIFKASY---QDGMVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRG 899
L G +G + + Y + + ++I+ L+ GT D +EA+ + ++ + + L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 900 YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSL 957
+ +LV + G L L G P+ ++ L ++ G+ +L
Sbjct: 404 VCQA--EALMLVMEMAGGGPLHKFLV------GKREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 958 DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ 1017
+ VH ++ +NVL A +S+FGL + A + ++ + L + +PE + +
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 1018 PTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKK 1055
+ +DV+S+G+ + E L+ G+KP + +++ ++++
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 20/246 (8%)
Query: 159 ISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYL 218
+ +ISP LDL +N + +F L + L N S + L++L+ L
Sbjct: 48 VPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKL 107
Query: 219 WLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNEL--TGL 276
++ NHL P+ SSLV L DN ++ + G + + + + N L +G
Sbjct: 108 YISKNHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGF 164
Query: 277 VPVSVLCNLWGNISSLRI--VQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSW 334
P G L++ +++ TG+ K L L L +N+I+A+
Sbjct: 165 EP--------GAFDGLKLNYLRISEAKLTGIPK----DLPETLNELHLDHNKIQAIELED 212
Query: 335 LTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDL 394
L + L + L N ++ L L L + NN LS VP + LLQ+ L
Sbjct: 213 LLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPDLKLLQVVYL 271
Query: 395 EGNRFS 400
N +
Sbjct: 272 HTNNIT 277
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 13/141 (9%)
Query: 529 GLPSLQVVSLEENNL--SGDVPEGFSSLVGLQYLNLSDNAFTG---DIPATYGFLRSLVF 583
GL ++ + + N L SG P F L L YL +S+ TG D+P T L
Sbjct: 145 GLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPET------LNE 197
Query: 584 LSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEI 643
L L HN+I + +L S L L L N +S L +++L L NKLS +
Sbjct: 198 LHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RV 256
Query: 644 PKEISKCSSLVSLTLDMNSLS 664
P + L + L N+++
Sbjct: 257 PAGLPDLKLLQVVYLHTNNIT 277
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 17/181 (9%)
Query: 867 RRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQE 926
R R G E R E L +V H N+ L Y DV +L+ + + G L L +
Sbjct: 51 RASRRGVCREEIER-EVSILRQVLHPNIITLHDVYENRTDV-VLILELVSGGELFDFLAQ 108
Query: 927 ASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEF 982
++ ++ G+++LH+ + H D+KP+N+ L D + L +F
Sbjct: 109 KESLSEEEATSFIKQILD-----GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 983 GLDRLAIATPAEASSSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPV 1041
GL A E I G+ +V+PE + EAD++S G++ +L+G P
Sbjct: 164 GL-----AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 1042 M 1042
+
Sbjct: 219 L 219
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 877 NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLN 936
+ FR+E + L R +T L + + LV +Y G+L TLL + G +
Sbjct: 106 SCFREERDVLVNGDRRWITQLHFAFQDE-NYLYLVMEYYVGGDLLTLLSKF----GERIP 160
Query: 937 WPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996
M + + +H L VH DIKP N+L D L++FG + A+ +
Sbjct: 161 AEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG---SCLKLRADGT 217
Query: 997 -SSTTPIGSLGYVSPE-------AASTGQPTKEADVYSFGIVLLEILTGRKP 1040
S +G+ Y+SPE TG E D ++ G+ E+ G+ P
Sbjct: 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 955 HSLDMVHGDIKPQNVLFDADFEA---HLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011
H + +VH D+KP+N+L + + L++FGL AI + + G+ GY+SPE
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGL---AIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 1012 AASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060
K D+++ G++L +L G P DED K + +Q++ G
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPPFW---DEDQHK-LYQQIKAG 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSP 1010
+LHSLD+++ D+KP+N+L D +++FG + + G+ Y++P
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAP 207
Query: 1011 EAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
E + K D ++ G+++ E+ G P F D+ I
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 244
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The Inhibited
State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSP 1010
+LHSLD+++ D+KP+N+L D +++FG + + G+ Y++P
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAP 207
Query: 1011 EAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
E + K D ++ G+++ E+ G P F D+ I
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 244
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSP 1010
+LHSLD+++ D+KP+N+L D +++FG + + G+ Y++P
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAP 207
Query: 1011 EAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
E + K D ++ G+++ E+ G P F D+ I
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 244
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSP 1010
+LHSLD+++ D+KP+N+L D +++FG + + G+ Y++P
Sbjct: 149 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAP 202
Query: 1011 EAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
E + K D ++ G+++ E+ G P F D+ I
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With A
Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 951 LSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSP 1010
+LHSLD+++ D+KP+N+L D +++FG + + G+ Y++P
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAP 207
Query: 1011 EAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
E + K D ++ G+++ E+ G P F D+ I
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQPI 244
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 874 IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGH 933
+ +E L +V H N+ L Y DV +L+ + + G L L +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQKESLSEE 115
Query: 934 VLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV-LFDADF---EAHLSEFGLDRLAI 989
++ ++ G+++LH+ + H D+KP+N+ L D + L +FGL
Sbjct: 116 EATSFIKQILD-----GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL----- 165
Query: 990 ATPAEASSSTTPI-GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
A E I G+ +V+PE + EAD++S G++ +L+G P +
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The
Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ G V+F + I +W K Q G
Sbjct: 219 IKG--GVLFPGTDHIDQWNKVIEQLG 242
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 113 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 164
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 165 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ G V+F + I +W K Q G
Sbjct: 220 IKG--GVLFPGTDHIDQWNKVIEQLG 243
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With
Gold
Length = 362
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 859 QDGMVLSIRRLRDG-TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917
Q +++++ + G IDEN ++E ++H N+ + P + +V +Y
Sbjct: 42 QSNELVAVKYIERGEKIDENV-KREIINHRSLRHPNIVRFKEVILTPTHL-AIVMEYASG 99
Query: 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEA 977
G L + A + + LIS G+S+ H++ + H D+K +N L D
Sbjct: 100 GELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAMQVCHRDLKLENTLLDGSPAP 154
Query: 978 HLS--EFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEI 1034
L FG + ++ S +G+ Y++PE + K ADV+S G+ L +
Sbjct: 155 RLKICAFGYSKSSVL----HSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQR 1059
L G P +D + K +K + R
Sbjct: 211 LVGAYPF---EDPEEPKNFRKTIHR 232
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 845 LSRGRYGLIFKA-SYQDGMVLSIRRLRDGTIDEN---TFRKEAEALGKVKHRNLTVLRGY 900
L G YG ++KA ++I+R+R +E T +E L +++HRN+ L+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 901 YAGPPDVRL-LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDM 959
+ RL L+++Y N +L + + V+ + LI+ G++F HS
Sbjct: 102 IHH--NHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLIN-----GVNFCHSRRC 153
Query: 960 VHGDIKPQNVLFDADFEAH-----LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEA-A 1013
+H D+KPQN+L + + +FGL R A P T I +L Y PE
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFGIPIR--QFTHEIITLWYRPPEILL 210
Query: 1014 STGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
+ + D++S + E+L K +F D +I
Sbjct: 211 GSRHYSTSVDIWSIACIWAEMLM--KTPLFPGDSEI 244
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL+ ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLSQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ G V+F + I +W K Q G
Sbjct: 219 IKG--GVLFPGTDHIDQWNKVIEQLG 242
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
L+ +Y G + L R ++S + + H +VH D+K +N+
Sbjct: 91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----AVQYCHQKRIVHRDLKAENL 145
Query: 970 LFDADFEAHLSEFGL-DRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSF 1027
L DAD +++FG + + +A P Y +PE + E DV+S
Sbjct: 146 LLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP-----YAAPELFQGKKYDGPEVDVWSL 200
Query: 1028 GIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
G++L +++G P D +K +++++ RG+
Sbjct: 201 GVILYTLVSGSLPF----DGQNLKELRERVLRGK 230
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 32/171 (18%)
Query: 890 KHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQEASH------------------ 929
+H N+ L G + GP L++ +Y G+L L+ +
Sbjct: 93 QHENIVNLLGACTHGGP---VLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 930 QDGHVLNWPMRHLISLG--LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR- 986
+DG L +R L+ +A+G++FL S + +H D+ +NVL A + +FGL R
Sbjct: 150 EDGRPLE--LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 987 -LAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ + ++ P+ +++PE+ T ++DV+S+GI+L EI +
Sbjct: 208 IMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ G V+F + I +W K Q G
Sbjct: 219 IKG--GVLFPGTDHIDQWNKVIEQLG 242
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.6 bits (109), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 IIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 890 KHRNLTVLRG--YYAGPPDVRLLVYDYMPNGNLATLLQ-------EASHQDGHVLNWPMR 940
+H N+ L G + GP L++ +Y G+L L+ E S+ H P
Sbjct: 108 QHENIVNLLGACTHGGP---VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN---PEE 161
Query: 941 HLISLGL-------ARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIAT 991
L S L A+G++FL S + +H D+ +NVL A + +FGL R + +
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
++ P+ +++PE+ T ++DV+S+GI+L EI +
Sbjct: 222 YIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr-
3451
Length = 353
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 22/200 (11%)
Query: 867 RRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR-----LLVYDYMPNGNLA 921
R ++ T + +R E + V H+N+ L + + LV + M + NL
Sbjct: 59 RPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC 116
Query: 922 TLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLS 980
++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D +
Sbjct: 117 QVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 168
Query: 981 EFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+FGL R T + T + + Y +PE + D++S G ++ E++ R
Sbjct: 169 DFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV--RHK 222
Query: 1041 VMFTQDEDIVKWVKKQLQRG 1060
++F + I +W K Q G
Sbjct: 223 ILFPGRDYIDQWNKVIEQLG 242
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAEASSSTTPIGS 1004
+A+G++FL S + +H D+ +NVL A + +FGL R + + ++ P+
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-- 230
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+++PE+ T ++DV+S+GI+L EI +
Sbjct: 231 -KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL+ ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLSQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ G V+F + I +W K Q G
Sbjct: 219 IKG--GVLFPGTDHIDQWNKVIEQLG 242
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR--LAIATPAEASSSTTPIGS 1004
+A+G++FL S + +H D+ +NVL A + +FGL R + + ++ P+
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-- 230
Query: 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+++PE+ T ++DV+S+GI+L EI +
Sbjct: 231 -KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf-
Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
+ +GR+G +++ ++ G ++++ + +E ++ +EAE V R+ +L G+ A
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENIL-GFIAA- 65
Query: 905 PDVRLLVYDYMPNGNLATL-LQEASHQDGHVLNWPMRHLIS--------LGLARGLSFLH 955
D NG L L H+ G + ++ R+ ++ L A GL+ LH
Sbjct: 66 --------DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 956 SLDMV---------HGDIKPQNVLFDADFEAHLSEFGLD-RLAIATPAEASSSTTPIGSL 1005
+++V H D+K +N+L + +++ GL R AT + +G+
Sbjct: 118 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 1006 GYVSPEAASTG------QPTKEADVYSFGIVLLEI 1034
Y++PE + K AD+Y+ G+V EI
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 928 SHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR- 986
+D +VL + + +A+G+ FL VH D+ +NVL + +FGL R
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 987 -LAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
++ + ++ P+ +++PE+ G T ++DV+S+GI+L EI +
Sbjct: 222 IMSDSNYVVRGNARLPV---KWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 876 ENTFRKEAEALGKVKHRNLTVLRGY-YAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHV 934
E +KE + L +++H+N+ L Y +V +Y G + +L + V
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPV 108
Query: 935 LNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994
H L GL +LHS +VH DIKP N+L +S G+ A+ A
Sbjct: 109 CQ---AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAE-ALHPFAA 164
Query: 995 ASSSTTPIGSLGYVSPEAASTGQPT---KEADVYSFGIVLLEILTGRKP 1040
+ T GS + PE A+ G T + D++S G+ L I TG P
Sbjct: 165 DDTCRTSQGSPAFQPPEIAN-GLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
+ +GR+G +++ ++ G ++++ + +E ++ +EAE V R+ +L G+ A
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENIL-GFIAA- 104
Query: 905 PDVRLLVYDYMPNGNLATL-LQEASHQDGHVLNWPMRHLIS--------LGLARGLSFLH 955
D NG L L H+ G + ++ R+ ++ L A GL+ LH
Sbjct: 105 --------DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 156
Query: 956 SLDMV---------HGDIKPQNVLFDADFEAHLSEFGLD-RLAIATPAEASSSTTPIGSL 1005
+++V H D+K +N+L + +++ GL R AT + +G+
Sbjct: 157 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 215
Query: 1006 GYVSPEAASTG------QPTKEADVYSFGIVLLEI 1034
Y++PE + K AD+Y+ G+V EI
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein
Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ ++ G P F D+ I
Sbjct: 227 LIYQMAAGYPP--FFADQPI 244
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL+ ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLSQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ G V+F + I +W K Q G
Sbjct: 219 IKG--GVLFPGTDHIDQWNKVIEQLG 242
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
+ +GR+G +++ ++ G ++++ + +E ++ +EAE V R+ +L G+ A
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENIL-GFIAA- 91
Query: 905 PDVRLLVYDYMPNGNLATL-LQEASHQDGHVLNWPMRHLIS--------LGLARGLSFLH 955
D NG L L H+ G + ++ R+ ++ L A GL+ LH
Sbjct: 92 --------DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 143
Query: 956 SLDMV---------HGDIKPQNVLFDADFEAHLSEFGLD-RLAIATPAEASSSTTPIGSL 1005
+++V H D+K +N+L + +++ GL R AT + +G+
Sbjct: 144 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 202
Query: 1006 GYVSPEAASTG------QPTKEADVYSFGIVLLEI 1034
Y++PE + K AD+Y+ G+V EI
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 38/225 (16%)
Query: 842 ENVLSRGRYGLIF----KASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVL 897
++++ RG YG ++ K + ++ + + R+ + ID +E L ++K ++
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD--YII 88
Query: 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPM----RHL--ISLGLARGL 951
R Y PD LL +D L +L+ A + P+ H+ I L G
Sbjct: 89 RLYDLIIPD-DLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGE 142
Query: 952 SFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA-------IATPAEASSS------ 998
+F+H ++H D+KP N L + D + +FGL R I E +
Sbjct: 143 NFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 999 ------TTPIGSLGYVSPEAASTGQP-TKEADVYSFGIVLLEILT 1036
T+ + + Y +PE + TK D++S G + E+L
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL+ ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLSQVIQMELDHER-------MSYLLYQMLV-GIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ G V+F + I +W K Q G
Sbjct: 219 IKG--GVLFPGTDHIDQWNKVIEQLG 242
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
+ +GR+G +++ ++ G ++++ + +E ++ +EAE V R+ +L G+ A
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENIL-GFIAA- 66
Query: 905 PDVRLLVYDYMPNGNLATL-LQEASHQDGHVLNWPMRHLIS--------LGLARGLSFLH 955
D NG L L H+ G + ++ R+ ++ L A GL+ LH
Sbjct: 67 --------DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 118
Query: 956 SLDMV---------HGDIKPQNVLFDADFEAHLSEFGLD-RLAIATPAEASSSTTPIGSL 1005
+++V H D+K +N+L + +++ GL R AT + +G+
Sbjct: 119 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 177
Query: 1006 GYVSPEAASTG------QPTKEADVYSFGIVLLEI 1034
Y++PE + K AD+Y+ G+V EI
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 62/157 (39%), Gaps = 2/157 (1%)
Query: 492 ASGFSGKIPGSIGSLMRLTTLDLS-NQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEG 550
++ +G + L L LDLS N L P GL L + L+ L P
Sbjct: 64 SNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGL 123
Query: 551 FSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLEL 610
F L LQYL L DN T+ L +L L L N+I + +L+ L L
Sbjct: 124 FRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLL 183
Query: 611 RSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEI 647
NH P L R+ L L N LS +P E+
Sbjct: 184 HQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEV 219
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 85/208 (40%), Gaps = 9/208 (4%)
Query: 192 QLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNV-LK 250
Q I L N S AS + L LWL SN L G +A + + L L DN L+
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 251 GLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPN 310
+ P T + L L L R L L P L+ +++L+ + L N + P N
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGP-----GLFRGLAALQYLYLQDNNLQAL--PDN 146
Query: 311 G-RCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLR 369
R + L L L NRI +V + SL + L N + P A L +L L
Sbjct: 147 TFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLY 206
Query: 370 VANNSLSGLVPDEIAKCSLLQMFDLEGN 397
+ N+LS L + + LQ L N
Sbjct: 207 LFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 301 AFTGVVKPPNGRCVSVLEVLDLQNN-RIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAV 359
AFTG+ ++LE LDL +N ++R V P+ + L + L P
Sbjct: 74 AFTGL---------TLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLF 124
Query: 360 GSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLG 419
L L+ L + +N+L L + L L GNR G+ L + L
Sbjct: 125 RGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLH 184
Query: 420 RNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEI 455
+N + + P +F +L +L TL L N++ +P E+
Sbjct: 185 QNHVARVHPHAFRDLGRLMTLYLFANNL-SMLPAEV 219
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 5/205 (2%)
Query: 346 LSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQV-P 404
L GN S A+ S L +L + +N+L+G+ +LL+ DL N V P
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 405 AFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRXXXXXXX 464
G+ L + L R L P F L+ L+ L L +N+++ +P+ R
Sbjct: 98 TTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQA-LPDNTFRDLGNLTH 156
Query: 465 XXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGKI-PGSIGSLMRLTTLDLSNQNLSGEL 523
+ VP ++ P + L RL TL L NLS L
Sbjct: 157 LFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-ML 215
Query: 524 PIE-LFGLPSLQVVSLEENNLSGDV 547
P E L L SLQ + L +N D
Sbjct: 216 PAEVLVPLRSLQYLRLNDNPWVCDC 240
Score = 37.0 bits (84), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Query: 532 SLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDI-PATYGFLRSLVFLSLSHNQ 590
+L ++ L N L+G F+ L L+ L+LSDNA + P T+ L L L L
Sbjct: 56 NLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCG 115
Query: 591 ISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKC 650
+ + P +AL+ L L+ N+ L + L L N++
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGL 175
Query: 651 SSLVSLTLDMNSLSGRIPESF 671
SL L L N ++ P +F
Sbjct: 176 HSLDRLLLHQNHVARVHPHAF 196
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 66/182 (36%), Gaps = 23/182 (12%)
Query: 98 RKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFXXXXXXXXXXXXXXXSG 157
+++ LH N ++ AS C L ++L N+ +G + + F
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAG-IDAAAFTGLTL------------ 80
Query: 158 KISADISPSLRYLDLSSNAFTGEI-PGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELE 216
L LDLS NA + P F L ++L P L L+
Sbjct: 81 ---------LEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQ 131
Query: 217 YLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGL 276
YL+L N+L + + +L HL N + + + +L L L +N + +
Sbjct: 132 YLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARV 191
Query: 277 VP 278
P
Sbjct: 192 HP 193
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009
G+ LHS ++H D+KP N++ +D + +FGL R A + TP Y
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-----ASTNFMMTPYVVTRYYR 190
Query: 1010 PEAASTGQPTKE-ADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060
G KE D++S G ++ E++ G V+F + I +W K Q G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGS--VIFQGTDHIDQWNKVIEQLG 240
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 7/241 (2%)
Query: 157 GKISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELE 216
++ A I + RYL+L N+ F L+++ LS N + L L
Sbjct: 27 AEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 86
Query: 217 YLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGL 276
L L N L A S L L +N ++ + R+ +L+ L L EL L
Sbjct: 87 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLG--ELKRL 144
Query: 277 VPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLT 336
+S + + +LR + LG + PN + LE L+L NR+ + P
Sbjct: 145 EYISEAA--FEGLVNLRYLNLGMCNLKDI---PNLTALVRLEELELSGNRLDLIRPGSFQ 199
Query: 337 NVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEG 396
+TSLR + L + A L LE L +++N+L L D L+ L
Sbjct: 200 GLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNH 259
Query: 397 N 397
N
Sbjct: 260 N 260
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%)
Query: 534 QVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISG 593
+ ++L+EN++ + F L L+ L LS N + L SL L L N+++
Sbjct: 38 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 97
Query: 594 MIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNK 638
+ S L L LR+N + + +++LDLG+ K
Sbjct: 98 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 142
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With 4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
+ +GR+G +++ ++ G ++++ + +E ++ +EAE V R+ +L G+ A
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENIL-GFIAA- 68
Query: 905 PDVRLLVYDYMPNGNLATL-LQEASHQDGHVLNWPMRHLIS--------LGLARGLSFLH 955
D NG L L H+ G + ++ R+ ++ L A GL+ LH
Sbjct: 69 --------DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 120
Query: 956 SLDMV---------HGDIKPQNVLFDADFEAHLSEFGLD-RLAIATPAEASSSTTPIGSL 1005
+++V H D+K +N+L + +++ GL R AT + +G+
Sbjct: 121 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 179
Query: 1006 GYVSPEAASTG------QPTKEADVYSFGIVLLEI 1034
Y++PE + K AD+Y+ G+V EI
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 943 ISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA-EASSSTT 1000
I++ + + L LHS L ++H D+KP NVL +A + +FG+ + A + +
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCK 200
Query: 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
P + ++PE G K +D++S GI +E+ R P
Sbjct: 201 PYXAPERINPELNQKGYSVK-SDIWSLGITXIELAILRFP 239
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 33/199 (16%)
Query: 861 GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNL 920
M+++ ++L D +EA +KH N+ L + L++D + G L
Sbjct: 41 AMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEGH-HYLIFDLVTGGEL 97
Query: 921 ATLL--------QEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFD 972
+ +ASH +L + H + +VH ++KP+N+L
Sbjct: 98 FEDIVAREYYSEADASHCIQQILE-------------AVLHCHQMGVVHRNLKPENLLLA 144
Query: 973 ADFE---AHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
+ + L++FG LAI E + G+ GY+SPE K D+++ G+
Sbjct: 145 SKLKGAAVKLADFG---LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV 201
Query: 1030 VLLEILTGRKPVMFTQDED 1048
+L +L G P DED
Sbjct: 202 ILYILLVGYPPFW---DED 217
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 930 QDGHVLNWPM---RHLISLGLARGLSFLHSLDMVHGDIKPQNVLF-DADFEAHLS-EFGL 984
+D + L +P+ RH+ + L + + FLH + H D+KP+N+LF ++D+E + E
Sbjct: 127 KDNNYLPYPIHQVRHM-AFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKR 185
Query: 985 DRLAIATPA-----------EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLE 1033
D ++ + A + +T + + Y +PE ++ DV+S G ++ E
Sbjct: 186 DERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245
Query: 1034 ILTG 1037
G
Sbjct: 246 YYVG 249
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Tyrosine- Protein Kinase Mer In Complex With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene
Protein Kinase Mer In Complex With Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 843 NVLSRGRYGLIFKASY--QDGMVLSI----RRLRDGTIDE-NTFRKEAEALGKVKHRNLT 895
+L G +G + + + +DG L + +L + + E F EA + H N+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 896 VLRGYY-----AGPPDVRLLVYDYMPNGNLATLLQEASHQDG--HVLNWPMRHLIS--LG 946
L G G P +++ +M G+L T L + + G H+ P++ L+ +
Sbjct: 100 RLLGVCIEMSSQGIPK-PMVILPFMKYGDLHTYLLYSRLETGPKHI---PLQTLLKFMVD 155
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+A G+ +L + + +H D+ +N + D +++FGL + I + +
Sbjct: 156 IALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK-KIYSGDYYRQGRIAKMPVK 214
Query: 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQIXXX 1065
+++ E+ + T ++DV++FG+ + EI T G P Q+ ++ ++ + Q
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDC 274
Query: 1066 XXXXXXXXXXXXXXWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112
++ C DPLDRP+ + + LE
Sbjct: 275 LDEL-----------------YEIMYSCWRTDPLDRPTFSVLRLQLE 304
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 859 QDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNG 918
Q +++++ + G ++E ++H N+ + P + +V +Y G
Sbjct: 42 QSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHL-AIVMEYASGG 100
Query: 919 NLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978
L + A + + LIS G+S+ H++ + H D+K +N L D
Sbjct: 101 ELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAMQVCHRDLKLENTLLDGSPAPR 155
Query: 979 LS--EFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEIL 1035
L +FG + ++ S + +G+ Y++PE + K ADV+S G+ L +L
Sbjct: 156 LKICDFGYSKSSVL----HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 1036 TGRKPVMFTQDEDIVKWVKKQLQR 1059
G P +D + K +K + R
Sbjct: 212 VGAYPF---EDPEEPKNFRKTIHR 232
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 867 RRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR-----LLVYDYMPNGNLA 921
R ++ T + +R E + V H+N+ L + + LV + M + NL
Sbjct: 97 RPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC 154
Query: 922 TLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLS 980
++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D +
Sbjct: 155 QVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
Query: 981 EFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRK 1039
+FGL R A S TP + + Y +PE + D++S G ++ E++ R
Sbjct: 207 DFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV--RH 259
Query: 1040 PVMFTQDEDIVKWVKKQLQRG 1060
++F + I +W K Q G
Sbjct: 260 KILFPGRDYIDQWNKVIEQLG 280
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 845 LSRGRYGLIFK---ASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYY 901
L RG +G++ + S + + +++ GT D+ +KE L +HRN+ L +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVK-GT-DQVLVKKEISILNIARHRNILHLHESF 70
Query: 902 AGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLDM 959
++ +++++++ ++ + ++ + LN R ++S + L FLHS ++
Sbjct: 71 ESMEEL-VMIFEFISGLDIFERINTSAFE----LN--EREIVSYVHQVCEALQFLHSHNI 123
Query: 960 VHGDIKPQNVLFDADFEAHLS--EFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ 1017
H DI+P+N+++ + + EFG R T P Y +PE
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP----EYYAPEVHQHDV 179
Query: 1018 PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVK 1051
+ D++S G ++ +L+G P + ++ I++
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE 213
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 39/215 (18%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP 904
+ +GR+G +++ ++ G ++++ + +E ++ +EAE V R+ +L G+ A
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRHENIL-GFIAA- 71
Query: 905 PDVRLLVYDYMPNGNLATL-LQEASHQDGHVLNWPMRHLIS--------LGLARGLSFLH 955
D NG L L H+ G + ++ R+ ++ L A GL+ LH
Sbjct: 72 --------DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 123
Query: 956 SLDMV---------HGDIKPQNVLFDADFEAHLSEFGLD-RLAIATPAEASSSTTPIGSL 1005
+++V H D+K +N+L + +++ GL R AT + +G+
Sbjct: 124 -MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 182
Query: 1006 GYVSPEAASTG------QPTKEADVYSFGIVLLEI 1034
Y++PE + K AD+Y+ G+V EI
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 218 LWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLV 277
L L +NH L S +SN + L +L+ ++ +K + P I ++ L LSL+ N++ +
Sbjct: 137 LNLGANHNLSDL-SPLSNXTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDIS 193
Query: 278 PVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTN 337
P++ L +SL N T + N ++ L++ NN+I + P L N
Sbjct: 194 PLASL-------TSLHYFTAYVNQITDITPVANXTRLNSLKI---GNNKITDLSP--LAN 241
Query: 338 VTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGN 397
++ L +++ N S AV L KL+ L V +N +S + + S L L N
Sbjct: 242 LSQLTWLEIGTNQISD--INAVKDLTKLKXLNVGSNQISDI--SVLNNLSQLNSLFLNNN 297
Query: 398 RFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLS 430
+ + +GG+ L + L +N + + PL+
Sbjct: 298 QLGNEDXEVIGGLTNLTTLFLSQNHITDIRPLA 330
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
LV +Y G + L R ++S + + H +VH D+K +N+
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKAENL 144
Query: 970 LFDADFEAHLSEFGL-DRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSF 1027
L DAD +++FG + +A P Y +PE + E DV+S
Sbjct: 145 LLDADMNIKIADFGFSNEFTFGNKLDAFCGAPP-----YAAPELFQGKKYDGPEVDVWSL 199
Query: 1028 GIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
G++L +++G P D +K +++++ RG+
Sbjct: 200 GVILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 105 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 156
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 157 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ R ++F + I +W K Q G
Sbjct: 212 V--RHKILFPGRDYIDQWNKVIEQLG 235
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 106 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 157
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 158 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ R ++F + I +W K Q G
Sbjct: 213 V--RHKILFPGRDYIDQWNKVIEQLG 236
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 24/201 (11%)
Query: 867 RRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR-----LLVYDYMPNGNLA 921
R ++ T + +R E + V H+N+ L + + LV + M + NL
Sbjct: 59 RPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLX 116
Query: 922 TLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLS 980
++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D +
Sbjct: 117 QVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 168
Query: 981 EFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKE-ADVYSFGIVLLEILTGRK 1039
+FGL R A S TP Y G KE D++S G ++ E++ R
Sbjct: 169 DFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV--RH 221
Query: 1040 PVMFTQDEDIVKWVKKQLQRG 1060
++F + I +W K Q G
Sbjct: 222 KILFPGRDYIDQWNKVIEQLG 242
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp
Length = 423
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 867 RRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR-----LLVYDYMPNGNLA 921
R ++ T + +R E + V H+N+ L + + LV + M + NL
Sbjct: 97 RPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC 154
Query: 922 TLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLS 980
++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D +
Sbjct: 155 QVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
Query: 981 EFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRK 1039
+FGL R A S TP + + Y +PE + D++S G ++ E++ R
Sbjct: 207 DFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV--RH 259
Query: 1040 PVMFTQDEDIVKWVKKQLQRG 1060
++F + I +W K Q G
Sbjct: 260 KILFPGRDYIDQWNKVIEQLG 280
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADF----EAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ + + +LH+ +VH D+KP N+L+ + + +FG A AE TP
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGF---AKQLRAENGLLMTPC 181
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +V+PE D++S G++L +LTG P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 106 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 157
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 158 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ R ++F + I +W K Q G
Sbjct: 213 V--RHKILFPGRDYIDQWNKVIEQLG 236
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment Of
Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 113 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 164
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 165 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ R ++F + I +W K Q G
Sbjct: 220 V--RHKILFPGRDYIDQWNKVIEQLG 243
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 113 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 164
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 165 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ R ++F + I +W K Q G
Sbjct: 220 V--RHKILFPGRDYIDQWNKVIEQLG 243
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole
Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 111 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 162
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 163 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 217
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ R ++F + I +W K Q G
Sbjct: 218 V--RHKILFPGRDYIDQWNKVIEQLG 241
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ R ++F + I +W K Q G
Sbjct: 219 V--RHKILFPGRDYIDQWNKVIEQLG 242
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A 1-Aryl-3,4-
Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of Jnk
Length = 364
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 112 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 163
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 164 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ R ++F + I +W K Q G
Sbjct: 219 V--RHKILFPGRDYIDQWNKVIEQLG 242
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 505 SLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGD-VPEGFSSLVGLQYLNLS 563
SL L LD+S+ + GL SL+V+ + N+ + +P+ F+ L L +L+LS
Sbjct: 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 502
Query: 564 DNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDI 623
P + L SL L++SHN + ++L+VL+ NH + ++
Sbjct: 503 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 562
Query: 624 SHL-SRIKKLDLGQNKLS 640
H S + L+L QN +
Sbjct: 563 QHFPSSLAFLNLTQNDFA 580
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 78/198 (39%), Gaps = 39/198 (19%)
Query: 497 GKIPG-SIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLS--GDVPEGFSS 553
G+ P + SL RLT N E+ LPSL+ + L N LS G +
Sbjct: 341 GQFPTLKLKSLKRLTFTSNKGGNAFSEV-----DLPSLEFLDLSRNGLSFKGCCSQSDFG 395
Query: 554 LVGLQYLNLSDNAFTGDIPATYGFL---------------------------RSLVFLSL 586
+ L+YL+LS F G I + FL R+L++L +
Sbjct: 396 TISLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 452
Query: 587 SHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDI-SHLSRIKKLDLGQNKLSGEIPK 645
SH S+LEVL++ N F N DI + L + LDL Q +L P
Sbjct: 453 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 512
Query: 646 EISKCSSLVSLTLDMNSL 663
+ SSL L + N+
Sbjct: 513 AFNSLSSLQVLNMSHNNF 530
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 165 PSLRYLDLSSN-----------------------AFTGEIP--GNFSSKSQLQLINLSYN 199
PSL +LDLS N +F G I NF QL+ ++ ++
Sbjct: 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHS 430
Query: 200 SFSGEVPASVG-QLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLK-GLIPGTI 257
+ SV L+ L YL + H + SSL L N + +P
Sbjct: 431 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 490
Query: 258 GRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVL 317
+ L L LS+ +L L P + + ++SSL+++ + N F + P +C++ L
Sbjct: 491 TELRNLTFLDLSQCQLEQLSPTA-----FNSLSSLQVLNMSHNNFFSLDTFP-YKCLNSL 544
Query: 318 EVLDLQNNRIRAVFPSWLTNV-TSLRVMDLSGNFFS 352
+VLD N I L + +SL ++L+ N F+
Sbjct: 545 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 137/366 (37%), Gaps = 44/366 (12%)
Query: 247 NVLKGLIPGTIGRISTLQVLSLSRNE--LTGLVPVSV--LCNLWGNISSLRIVQLGFNAF 302
NV+K I G G VL RNE L ++ LCNL I R+ L +
Sbjct: 239 NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL--TIEEFRLAYLDY-YL 295
Query: 303 TGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSL 362
G++ N C++ + L +VT RV D S NF +L
Sbjct: 296 DGIIDLFN--CLTNVSSFSL-------------VSVTIERVKDFSYNFGWQHLELVNCKF 340
Query: 363 DKLEVLRVANNSLSGLV------PDEIAKCSL--LQMFDLEGN--RFSGQVPAFLGGIRG 412
+ L++ SL L + ++ L L+ DL N F G G
Sbjct: 341 GQFPTLKLK--SLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTIS 398
Query: 413 LKIVSLGRNMFSGLIPLS--FGNLSQLETLNLSENDIRGNIPEEITRXXXXXXXXXXYNK 470
LK + L F+G+I +S F L QLE L+ ++++ + E +
Sbjct: 399 LKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISH 454
Query: 471 FGGKVPYDXXXXXXXXXXXXSASGFSGK---IPGSIGSLMRLTTLDLSNQNLSGELPIEL 527
+V ++ +G S + +P L LT LDLS L P
Sbjct: 455 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514
Query: 528 FGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLS-DNAFTGDIPATYGFLRSLVFLSL 586
L SLQV+++ NN + L LQ L+ S ++ T F SL FL+L
Sbjct: 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNL 574
Query: 587 SHNQIS 592
+ N +
Sbjct: 575 TQNDFA 580
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 158 KISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEY 217
KI ++ S + LDLS N +F S +LQ+++LS + L L
Sbjct: 45 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 104
Query: 218 LWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLV 277
L L N + A S SSL L A + L L IG + TL+ L+++ N L+
Sbjct: 105 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN----LI 160
Query: 278 PVSVLCNLWGNISSLRIVQLGFNAFTGV 305
L + N+++L + L N +
Sbjct: 161 QSFKLPEYFSNLTNLEHLDLSSNKIQSI 188
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 25/134 (18%)
Query: 317 LEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLS 376
L+VLDL I+ + +++ L + L+GN A L L+ L +L+
Sbjct: 78 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 137
Query: 377 GLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGL-IPLSFGNLS 435
L P +G ++ LK +++ N+ +P F NL+
Sbjct: 138 SL----------------------ENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLT 173
Query: 436 QLETLNLSENDIRG 449
LE L+LS N I+
Sbjct: 174 NLEHLDLSSNKIQS 187
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYV 1008
G+ LHS ++H D+KP N++ +D + +FGL R A + TP + + Y
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC-----TNFMMTPYVVTRYYR 192
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+PE D++S G ++ E++ G V+F + I +W K Q G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG--CVIFQGTDHIDQWNKVIEQLG 242
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADF---EAHLSEFGLDRLAIATPAEASSSTTPIG 1003
+ G+ +LH ++VH D+KPQN+L + + + + +FG+ R A +G
Sbjct: 140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELREIMG 195
Query: 1004 SLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042
+ Y++PE + T D+++ GI+ +LT P +
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFV 234
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGL-DRLAIATPAEASSSTTPIGSL 1005
+ + + H +VH D+K +N+L DAD +++FG + +A P
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPP---- 177
Query: 1006 GYVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
Y +PE + E DV+S G++L +++G P D +K +++++ RG+
Sbjct: 178 -YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 845 LSRGRYGLIFKASYQDGMVLSIRRLR--DGTIDENTFRKEAEALGKVKHRNLTVLRGYYA 902
+ RG YG ++KA +DG L+ +GT + +E L ++KH N+ L+ +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 903 GPPDVRL-LVYDYMPNGNLATL-LQEASHQDGHVLNWPMRHLISL--GLARGLSFLHSLD 958
D ++ L++DY + + AS + + P + SL + G+ +LH+
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 959 MVHGDIKPQNVLFDAD----FEAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPE-A 1012
++H D+KP N+L + +++ G RL +P + + P + + Y +PE
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARL-FNSPLKPLADLDPVVVTFWYRAPELL 207
Query: 1013 ASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI 1049
TK D+++ G + E+LT +P+ + EDI
Sbjct: 208 LGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQEDI 243
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 114 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 165
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKE-ADVYSFGIVLLEI 1034
+ +FGL R A S P Y G KE D++S G ++ E+
Sbjct: 166 TLKILDFGLART-----AGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 220
Query: 1035 LTGRKPVMFTQDEDIVKWVK 1054
+ G V+F + I +W K
Sbjct: 221 IKG--GVLFPGTDHIDQWNK 238
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
L+ +Y G + L R ++S + + H +VH D+K +N+
Sbjct: 88 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----AVQYCHQKRIVHRDLKAENL 142
Query: 970 LFDADFEAHLSEFGL-DRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSF 1027
L DAD +++FG + + + + P Y +PE + E DV+S
Sbjct: 143 LLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP-----YAAPELFQGKKYDGPEVDVWSL 197
Query: 1028 GIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
G++L +++G P D +K +++++ RG+
Sbjct: 198 GVILYTLVSGSLPF----DGQNLKELRERVLRGK 227
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 867 RRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR-----LLVYDYMPNGNLA 921
R ++ T + +R E + V H+N+ L + + LV + M + NL
Sbjct: 59 RPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLX 116
Query: 922 TLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLS 980
++Q E H+ L + M G+ LHS ++H D+KP N++ +D +
Sbjct: 117 QVIQMELDHERMSYLLYQM--------LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKIL 168
Query: 981 EFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRK 1039
+FGL R A S TP + + Y +PE + D++S G ++ E++ R
Sbjct: 169 DFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV--RH 221
Query: 1040 PVMFTQDEDIVKWVKKQLQRG 1060
++F + I +W K Q G
Sbjct: 222 KILFPGRDYIDQWNKVIEQLG 242
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYV 1008
G+ LHS ++H D+KP N++ +D + +FGL R A S TP + + Y
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-----AGTSFMMTPYVVTRYYR 185
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+PE + D++S G ++ E++ R ++F + I +W K Q G
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKVIEQLG 235
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 505 SLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGD-VPEGFSSLVGLQYLNLS 563
SL L LD+S+ + GL SL+V+ + N+ + +P+ F+ L L +L+LS
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 564 DNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDI 623
P + L SL L++SHN + ++L+VL+ NH + ++
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 538
Query: 624 SHL-SRIKKLDLGQNKLS 640
H S + L+L QN +
Sbjct: 539 QHFPSSLAFLNLTQNDFA 556
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 77/198 (38%), Gaps = 39/198 (19%)
Query: 497 GKIPG-SIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLS--GDVPEGFSS 553
G+ P + SL RLT N E+ LPSL+ + L N LS G +
Sbjct: 317 GQFPTLKLKSLKRLTFTSNKGGNAFSEV-----DLPSLEFLDLSRNGLSFKGCCSQSDFG 371
Query: 554 LVGLQYLNLSDNAFTGDIPATYGFL---------------------------RSLVFLSL 586
L+YL+LS F G I + FL R+L++L +
Sbjct: 372 TTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428
Query: 587 SHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDI-SHLSRIKKLDLGQNKLSGEIPK 645
SH S+LEVL++ N F N DI + L + LDL Q +L P
Sbjct: 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488
Query: 646 EISKCSSLVSLTLDMNSL 663
+ SSL L + N+
Sbjct: 489 AFNSLSSLQVLNMSHNNF 506
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 34/216 (15%)
Query: 165 PSLRYLDLSSN--AFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVG--QLQELEY--- 217
PSL +LDLS N +F G + + L+ ++LS+N +G QL+ L++
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHS 406
Query: 218 -----------------LWLDSNHLYGTLP-SAISN-CSSLVHLSAEDNVLK-GLIPGTI 257
++LD +H + + + I N SSL L N + +P
Sbjct: 407 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 466
Query: 258 GRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVL 317
+ L L LS+ +L L P + + ++SSL+++ + N F + P +C++ L
Sbjct: 467 TELRNLTFLDLSQCQLEQLSPTA-----FNSLSSLQVLNMSHNNFFSLDTFP-YKCLNSL 520
Query: 318 EVLDLQNNRIRAVFPSWLTNV-TSLRVMDLSGNFFS 352
+VLD N I L + +SL ++L+ N F+
Sbjct: 521 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 105/274 (38%), Gaps = 22/274 (8%)
Query: 335 LTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLV------PDEIAKCSL 388
L +VT RV D S NF +L + L++ SL L + ++ L
Sbjct: 289 LVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLK--SLKRLTFTSNKGGNAFSEVDL 346
Query: 389 --LQMFDLEGN--RFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLS--FGNLSQLETLNL 442
L+ DL N F G G LK + L F+G+I +S F L QLE L+
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDF 403
Query: 443 SENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGK---I 499
++++ + E + +V ++ +G S + +
Sbjct: 404 QHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 462
Query: 500 PGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQY 559
P L LT LDLS L P L SLQV+++ NN + L LQ
Sbjct: 463 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 522
Query: 560 LNLS-DNAFTGDIPATYGFLRSLVFLSLSHNQIS 592
L+ S ++ T F SL FL+L+ N +
Sbjct: 523 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Score = 33.9 bits (76), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 11/200 (5%)
Query: 183 GNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL--YGTLPSAISNCSSLV 240
G F + L L++ S G S L LE+L L N L G + +SL
Sbjct: 317 GQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 241 HLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFN 300
+L N + + +G + L+ L + L + SV +L N+ L I
Sbjct: 377 YLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSL-RNLIYLDISHTHTR 434
Query: 301 -AFTGVVKPPNGRCVSVLEVLDLQNNRIRAVF-PSWLTNVTSLRVMDLSGNFFSGNLPAA 358
AF G+ NG +S LEVL + N + F P T + +L +DLS P A
Sbjct: 435 VAFNGIF---NG--LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Query: 359 VGSLDKLEVLRVANNSLSGL 378
SL L+VL +++N+ L
Sbjct: 490 FNSLSSLQVLNMSHNNFFSL 509
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 158 KISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEY 217
KI ++ S + LDLS N +F S +LQ+++LS + L L
Sbjct: 21 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 80
Query: 218 LWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLV 277
L L N + A S SSL L A + L L IG + TL+ L+++ N L+
Sbjct: 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN----LI 136
Query: 278 PVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTN 337
L + N+++ LE LDL +N+I++++
Sbjct: 137 QSFKLPEYFSNLTN-------------------------LEHLDLSSNKIQSIY------ 165
Query: 338 VTSLRVM 344
T LRV+
Sbjct: 166 CTDLRVL 172
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 25/134 (18%)
Query: 317 LEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLS 376
L+VLDL I+ + +++ L + L+GN A L L+ L +L+
Sbjct: 54 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 113
Query: 377 GLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGL-IPLSFGNLS 435
L P +G ++ LK +++ N+ +P F NL+
Sbjct: 114 SL----------------------ENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLT 149
Query: 436 QLETLNLSENDIRG 449
LE L+LS N I+
Sbjct: 150 NLEHLDLSSNKIQS 163
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ Y++P + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLF---DADFEA-HLSEFGLDRLAIATPAEASSSTTPI 1002
+ + + +LHS +VH D+KP N+L+ + E + +FG A AE TP
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPC 186
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +V+PE + D++S GI+L +L G P
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYV 1008
G+ LHS ++H D+KP N++ +D + +FGL R A S TP + + Y
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-----AGTSFMMTPYVVTRYYR 192
Query: 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+PE + D++S G ++ E++ R ++F + I +W K Q G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKVIEQLG 242
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16 In
Complex With Staurosporine
Length = 317
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 14/213 (6%)
Query: 859 QDGMVLSIRR-LRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917
DG +++R L D ++EA+ H N+ L Y + + +P
Sbjct: 52 HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPF 111
Query: 918 GNLATLLQEASH--QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
TL E G+ L + LG+ RGL +H+ H D+KP N+L +
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
Query: 976 EAHLSEFG-LDRLAIATPAEASSST-----TPIGSLGYVSPEAASTGQPT---KEADVYS 1026
+ L + G +++ I + T ++ Y +PE S + DV+S
Sbjct: 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231
Query: 1027 FGIVLLEILTGRKP--VMFTQDEDIVKWVKKQL 1057
G VL ++ G P ++F + + + V+ QL
Sbjct: 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
LV +Y G + L R ++S + + H +VH D+K +N+
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKAENL 144
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFG 1028
L DAD +++FG + T GS Y +PE + E DV+S G
Sbjct: 145 LLDADMNIKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 1029 IVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
++L +++G P D +K +++++ RG+
Sbjct: 201 VILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLF---DADFEA-HLSEFGLDRLAIATPAEASSSTTPI 1002
+ + + +LHS +VH D+KP N+L+ + E + +FG A AE TP
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPC 186
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +V+PE + D++S GI+L +L G P
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
LV +Y G + L R ++S + + H +VH D+K +N+
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKAENL 144
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFG 1028
L DAD +++FG + T GS Y +PE + E DV+S G
Sbjct: 145 LLDADMNIKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 1029 IVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
++L +++G P D +K +++++ RG+
Sbjct: 201 VILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
LV +Y G + L R ++S + + H +VH D+K +N+
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKAENL 144
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFG 1028
L DAD +++FG + T GS Y +PE + E DV+S G
Sbjct: 145 LLDADMNIKIADFGFSNEFTF----GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 1029 IVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
++L +++G P D +K +++++ RG+
Sbjct: 201 VILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
S +A+G++FL S + +H D+ +N+L + +FGL R I +
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNYVVKGNAR 226
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ +++PE+ T E+DV+S+GI L E+ +
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
S +A+G++FL S + +H D+ +N+L + +FGL R I +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-HIKNDSNYVVKGNAR 231
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ +++PE+ T E+DV+S+GI L E+ +
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 505 SLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGD-VPEGFSSLVGLQYLNLS 563
SL L LD+S+ + GL SL+V+ + N+ + +P+ F+ L L +L+LS
Sbjct: 124 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 183
Query: 564 DNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDI 623
P + L SL L++SHN + ++L+VL+ NH + ++
Sbjct: 184 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243
Query: 624 SHL-SRIKKLDLGQNKLS 640
H S + L+L QN +
Sbjct: 244 QHFPSSLAFLNLTQNDFA 261
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 501 GSIGSLMRLTTLDLSNQNLS--GELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQ 558
G L +LT L LS+ LS G FG SL+ + L N + + F L L+
Sbjct: 46 GVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLE 104
Query: 559 YLNLS-DNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTG 617
+L+ N + + LR+L++L +SH S+LEVL++ N F
Sbjct: 105 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164
Query: 618 NIPVDI-SHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSL 663
N DI + L + LDL Q +L P + SSL L + N+
Sbjct: 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 89/219 (40%), Gaps = 33/219 (15%)
Query: 163 ISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYN--SFSGEVPASVGQLQELEYLWL 220
I S L+L SN G F +QL ++LS N SF G S L+YL L
Sbjct: 26 IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85
Query: 221 DSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVS 280
N + T+ S L HL + + LK + +E + + +
Sbjct: 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQM------------------SEFSVFLSLR 126
Query: 281 VLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVF-PSWLTNVT 339
L L + + R+ AF G+ NG +S LEVL + N + F P T +
Sbjct: 127 NLIYLDISHTHTRV------AFNGIF---NG--LSSLEVLKMAGNSFQENFLPDIFTELR 175
Query: 340 SLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGL 378
+L +DLS P A SL L+VL +++N+ L
Sbjct: 176 NLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 499 IPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQ 558
+P L LT LDLS L P L SLQV+++ NN + L LQ
Sbjct: 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226
Query: 559 YLNLS-DNAFTGDIPATYGFLRSLVFLSLSHNQIS 592
L+ S ++ T F SL FL+L+ N +
Sbjct: 227 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 166 SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGE-VPASVGQLQELEYLWLDSNH 224
+L YLD+S G F+ S L+++ ++ NSF +P +L+ L +L L
Sbjct: 127 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186
Query: 225 LYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNEL 273
L P+A ++ SSL L+ N L +++LQVL S N +
Sbjct: 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235
Score = 29.6 bits (65), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 162 DISPSLR---YLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYL 218
DI LR +LDLS P F+S S LQ++N+S+N+F L L+ L
Sbjct: 169 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228
Query: 219 WLDSNHL 225
NH+
Sbjct: 229 DYSLNHI 235
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
S +A+G++FL S + +H D+ +N+L + +FGL R I +
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNYVVKGNAR 224
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ +++PE+ T E+DV+S+GI L E+ +
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 880 RKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPM 939
++EA +KH ++ L Y+ + +V+++M +L + + + G V + +
Sbjct: 74 KREASICHMLKHPHIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAV 131
Query: 940 RHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999
+ L + H +++H D+KP+NVL + + + G +AI +
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG 191
Query: 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQD---EDIVK 1051
+G+ +++PE K DV+ G++L +L+G P T++ E I+K
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADF----EAHLSEFGLDRLAIATPAEASSSTTPI 1002
+ + + +LH+ +VH D+KP N+L+ + + +FG A AE TP
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLXTPC 181
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
+ +V+PE D++S G++L LTG P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 7/241 (2%)
Query: 157 GKISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELE 216
++ A I + RYL+L N+ F L+++ LS N + L L
Sbjct: 27 AEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLN 86
Query: 217 YLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGL 276
L L N L A S L L +N ++ + R+ +L+ L L EL L
Sbjct: 87 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLG--ELKRL 144
Query: 277 VPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLT 336
+S + + +LR + LG + PN + LE L+L NR+ + P
Sbjct: 145 EYISEAA--FEGLVNLRYLNLGMCNLKDI---PNLTALVRLEELELSGNRLDLIRPGSFQ 199
Query: 337 NVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEG 396
+TSLR + L + A L LE L +++N+L L D L+ L
Sbjct: 200 GLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNH 259
Query: 397 N 397
N
Sbjct: 260 N 260
Score = 30.0 bits (66), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%)
Query: 534 QVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISG 593
+ ++L+EN++ + F L L+ L LS N + L SL L L N+++
Sbjct: 38 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 97
Query: 594 MIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNK 638
+ S L L LR+N + + +++LDLG+ K
Sbjct: 98 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 142
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
S +A+G++FL S + +H D+ +N+L + +FGL R I +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNYVVKGNAR 231
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ +++PE+ T E+DV+S+GI L E+ +
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e
Double Mutant
Length = 327
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
LV +Y G + L R ++S + + H +VH D+K +N+
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKAENL 144
Query: 970 LFDADFEAHLSEFGL-DRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSF 1027
L DAD +++FG + + + P Y +PE + E DV+S
Sbjct: 145 LLDADMNIKIADFGFSNEFTFGNKLDEFCGSPP-----YAAPELFQGKKYDGPEVDVWSL 199
Query: 1028 GIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
G++L +++G P D +K +++++ RG+
Sbjct: 200 GVILYTLVSGSLPF----DGQNLKELRERVLRGK 229
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 547 VPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALE 606
VP G + Q L L DN T P + L +L L L NQ+ + + + L
Sbjct: 34 VPAGIPT--NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91
Query: 607 VLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSL 663
VL+L +N T L +K+L + NKL+ E+P+ I + + L L LD N L
Sbjct: 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 166 SLRYLDLSSNAFTGEIP-GNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNH 224
+L+ L L SN G +P G F S +QL +++L N + A +L L+ L++ N
Sbjct: 65 NLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNK 123
Query: 225 LYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTL 263
L LP I + L HL+ + N LK + G R+S+L
Sbjct: 124 L-TELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161
Score = 33.1 bits (74), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 51/142 (35%), Gaps = 23/142 (16%)
Query: 100 LSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFXXXXXXXXXXXXXXXSGKI 159
L LH N + P L+ +YL N G LP+ +F
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF------------------- 84
Query: 160 SADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLW 219
D L LDL +N T F L+ + + N + E+P + +L L +L
Sbjct: 85 --DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141
Query: 220 LDSNHLYGTLPSAISNCSSLVH 241
LD N L A SSL H
Sbjct: 142 LDQNQLKSIPHGAFDRLSSLTH 163
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 226 YGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNL 285
+ ++P+ I + +++L DN + L PG + L+ L L N+L G +PV V
Sbjct: 31 HASVPAGIPTNAQILYL--HDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV---- 83
Query: 286 WGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMD 345
+ +++ L ++ LG N T + R V + E+ N P + +T L +
Sbjct: 84 FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE--LPRGIERLTHLTHLA 141
Query: 346 LSGNFFSGNLPAAVGSLDKLEVLRVA 371
L N ++P G+ D+L L A
Sbjct: 142 LDQNQLK-SIPH--GAFDRLSSLTHA 164
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 943 ISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPI 1002
S +A+G++FL S + +H D+ +N+L + +FGL R I +
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNYVVKGNAR 208
Query: 1003 GSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036
+ +++PE+ T E+DV+S+GI L E+ +
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ +LH ++H D+KP+NVL + D +++FG ++ E S T G+
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPT 320
Query: 1007 YVSPE---AASTGQPTKEADVYSFGIVLLEILTGRKP 1040
Y++PE + T + D +S G++L L+G P
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 229 LPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGN 288
+P IS + L++L +N ++ + + + L++L LSRN + ++ +
Sbjct: 58 VPDGISTNTRLLNL--HENQIQIIKVNSFKHLRHLEILQLSRNHIR-----TIEIGAFNG 110
Query: 289 ISSLRIVQLGFNAFTGVVKPPNGRCV--SVLEVLDLQNNRIRAVFPSWLTN-VTSLRVMD 345
+++L ++L N T + PNG V S L+ L L+NN I ++ PS+ N + SLR +D
Sbjct: 111 LANLNTLELFDNRLTTI---PNGAFVYLSKLKELWLRNNPIESI-PSYAFNRIPSLRRLD 166
Query: 346 LSGNFFSGNLP----AAVGSLDKLEVLRVANNSLSGL--VPDEIAKCSLLQMFDLEGNRF 399
L G L + G+ + L LR N ++ L +P+ + L DL GN
Sbjct: 167 L------GELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN-LTPLIKLDELDLSGNHL 219
Query: 400 SGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDI 447
S P G+ L+ + + ++ + +F NL L +NL+ N++
Sbjct: 220 SAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 267
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 9/189 (4%)
Query: 180 EIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSL 239
E+P S+ ++L +NL N S L+ LE L L NH+ A + ++L
Sbjct: 57 EVPDGISTNTRL--LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL 114
Query: 240 VHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGF 299
L DN L + G +S L+ L L N + + + + I SLR + LG
Sbjct: 115 NTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYA-----FNRIPSLRRLDLGE 169
Query: 300 NAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAV 359
+ +S L L+L +R + P+ LT + L +DLSGN S P +
Sbjct: 170 LKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PN-LTPLIKLDELDLSGNHLSAIRPGSF 227
Query: 360 GSLDKLEVL 368
L L+ L
Sbjct: 228 QGLMHLQKL 236
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 111/329 (33%), Gaps = 95/329 (28%)
Query: 317 LEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLS 376
LE+L L N IR + + +L ++L N + A L KL+ L + NN +
Sbjct: 90 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 149
Query: 377 GLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQ 436
+ + L+ D LG ++ L +S G +F LS
Sbjct: 150 SIPSYAFNRIPSLRRLD-------------LGELKRLSYISEG----------AFEGLSN 186
Query: 437 LETLNLSENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFS 496
L LNL+ ++R
Sbjct: 187 LRYLNLAMCNLR------------------------------------------------ 198
Query: 497 GKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVG 556
+IP ++ L++L LDLS +LS P GL LQ + + ++ + F +L
Sbjct: 199 -EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS 256
Query: 557 LQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHN-------------QISGMIPAELGACS 603
L +NL+ N T + L L + L HN I M P+ C+
Sbjct: 257 LVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIKDMAPSNTACCA 316
Query: 604 ALE---------VLELRSNHFTGNIPVDI 623
+ EL N+FT PV +
Sbjct: 317 RCNTPPNLKGRYIGELDQNYFTCYAPVIV 345
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 23/165 (13%)
Query: 166 SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL 225
+LRYL+L+ EIP N + +L ++LS N S P S L L+ LW+ + +
Sbjct: 186 NLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 243
Query: 226 YGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNE------------- 272
+A N SLV ++ N L L + L+ + L N
Sbjct: 244 QVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWW 303
Query: 273 LTGLVP----VSVLCNLWGNISSLRIVQLGFNAFTG----VVKPP 309
+ + P CN N+ I +L N FT +V+PP
Sbjct: 304 IKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP 348
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 80/204 (39%), Gaps = 40/204 (19%)
Query: 497 GKIPG-SIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLS--GDVPEGFSS 553
G+ P + SL RLT N E+ LPSL+ + L N LS G +
Sbjct: 317 GQFPTLKLKSLKRLTFTSNKGGNAFSEV-----DLPSLEFLDLSRNGLSFKGCCSQSDFG 371
Query: 554 LVGLQYLNLSDNAFTGDIPATYGFL---------------------------RSLVFLSL 586
L+YL+LS F G I + FL R+L++L +
Sbjct: 372 TTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 428
Query: 587 SHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDI-SHLSRIKKLDLGQNKLSGEIPK 645
SH S+LEVL++ N F N DI + L + LDL Q +L P
Sbjct: 429 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488
Query: 646 EISKCSSLVSLTLDMNSLSGRIPE 669
+ SSL L + N L +P+
Sbjct: 489 AFNSLSSLQVLNMASNQLKS-VPD 511
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 166 SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGE-VPASVGQLQELEYLWLDSNH 224
+L YLD+S G F+ S L+++ ++ NSF +P +L+ L +L L
Sbjct: 422 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 481
Query: 225 LYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCN 284
L P+A ++ SSL L+ N LK + G R+++LQ + L N P +
Sbjct: 482 LEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 541
Query: 285 LWGNISSLR 293
W N +S +
Sbjct: 542 RWLNKNSQK 550
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 95/227 (41%), Gaps = 13/227 (5%)
Query: 183 GNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHL--YGTLPSAISNCSSLV 240
G F + L L++ S G S L LE+L L N L G + +SL
Sbjct: 317 GQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 241 HLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFN 300
+L N + + +G + L+ L + L + SV +L N+ L I
Sbjct: 377 YLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSL-RNLIYLDISHTHTR 434
Query: 301 -AFTGVVKPPNGRCVSVLEVLDLQNNRIRAVF-PSWLTNVTSLRVMDLSGNFFSGNLPAA 358
AF G+ NG +S LEVL + N + F P T + +L +DLS P A
Sbjct: 435 VAFNGIF---NG--LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Query: 359 VGSLDKLEVLRVANNSLSGLVPDEI-AKCSLLQMFDLEGNRFSGQVP 404
SL L+VL +A+N L VPD I + + LQ L N + P
Sbjct: 490 FNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 165 PSLRYLDLSSN--AFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYL-WLD 221
PSL +LDLS N +F G + + L+ ++LS+N +G L++LE+L +
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQH 405
Query: 222 SNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELT-GLVP-- 278
SN + S + +L++L + G +S+L+VL ++ N +P
Sbjct: 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
Query: 279 VSVLCNL-WGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTN 337
+ L NL + ++S ++ QL AF +S L+VL++ +N++++V
Sbjct: 466 FTELRNLTFLDLSQCQLEQLSPTAFNS---------LSSLQVLNMASNQLKSVPDGIFDR 516
Query: 338 VTSLRVMDLSGNFFSGNLP 356
+TSL+ + L N + + P
Sbjct: 517 LTSLQKIWLHTNPWDCSCP 535
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 23/254 (9%)
Query: 335 LTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLV------PDEIAKCSL 388
L +VT RV D S NF +L + L++ SL L + ++ L
Sbjct: 289 LVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLK--SLKRLTFTSNKGGNAFSEVDL 346
Query: 389 --LQMFDLEGN--RFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLS--FGNLSQLETLNL 442
L+ DL N F G G LK + L F+G+I +S F L QLE L+
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS---FNGVITMSSNFLGLEQLEHLDF 403
Query: 443 SENDIRGNIPEEITRXXXXXXXXXXYNKFGGKVPYDXXXXXXXXXXXXSASGFSGK---I 499
++++ + E + +V ++ +G S + +
Sbjct: 404 QHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 462
Query: 500 PGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEG-FSSLVGLQ 558
P L LT LDLS L P L SLQV+++ N L VP+G F L LQ
Sbjct: 463 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQ 521
Query: 559 YLNLSDNAFTGDIP 572
+ L N + P
Sbjct: 522 KIWLHTNPWDCSCP 535
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 158 KISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEY 217
KI ++ S + LDLS N +F S +LQ+++LS + L L
Sbjct: 21 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 80
Query: 218 LWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLV 277
L L N + A S SSL L A + L L IG + TL+ L+++ N L+
Sbjct: 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN----LI 136
Query: 278 PVSVLCNLWGNISSLRIVQLGFNAFTGV 305
L + N+++L + L N +
Sbjct: 137 QSFKLPEYFSNLTNLEHLDLSSNKIQSI 164
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 25/134 (18%)
Query: 317 LEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLS 376
L+VLDL I+ + +++ L + L+GN A L L+ L +L+
Sbjct: 54 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 113
Query: 377 GLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGL-IPLSFGNLS 435
L P +G ++ LK +++ N+ +P F NL+
Sbjct: 114 SL----------------------ENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLT 149
Query: 436 QLETLNLSENDIRG 449
LE L+LS N I+
Sbjct: 150 NLEHLDLSSNKIQS 163
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik)
V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 821 VMFNNKITYV--ETLEATRQFDEENVLSRGRYGLIFK-ASYQDGMVLSIRRLRDGTIDEN 877
V+ K+ V E E + L RG +G + + Q G +++++R
Sbjct: 54 VLLTEKLKPVDYEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR-----LE 108
Query: 878 TFR-KEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASH--QDGHV 934
FR +E A + + L G P V + + + + G+L L+++ +D
Sbjct: 109 VFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFM-ELLEGGSLGQLIKQMGCLPED--- 164
Query: 935 LNWPMRHLISLGLA-RGLSFLHSLDMVHGDIKPQNVLFDAD-FEAHLSEFGLDRLAIATP 992
R L LG A GL +LH+ ++HGD+K NVL +D A L +FG L +
Sbjct: 165 -----RALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG-HALCLQPD 218
Query: 993 AEASSSTTP---IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKP 1040
S T G+ +++PE + D++S ++L +L G P
Sbjct: 219 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ +LH ++H D+KP+NVL + D +++FG ++ E S T G+
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPT 306
Query: 1007 YVSPE---AASTGQPTKEADVYSFGIVLLEILTGRKP 1040
Y++PE + T + D +S G++L L+G P
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 937 WPMRHL--ISLGLARGLSFLHSLDMVHGDIKPQNVLF-DADFEA----HLS--EFGLDRL 987
+P+ H+ ++ L L FLH + H D+KP+N+LF +++FE H S E +
Sbjct: 129 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 188
Query: 988 AIATPAEASSS------TTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTG 1037
+I S++ TT + + Y PE + DV+S G +L E G
Sbjct: 189 SIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 937 WPMRHL--ISLGLARGLSFLHSLDMVHGDIKPQNVLF-DADFEA----HLS--EFGLDRL 987
+P+ H+ ++ L L FLH + H D+KP+N+LF +++FE H S E +
Sbjct: 152 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 211
Query: 988 AIATPAEASSS------TTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTG 1037
+I S++ TT + + Y PE + DV+S G +L E G
Sbjct: 212 SIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969
+V +Y+ G + + L+ + P + + +LHSLD+++ D+KP+N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGR-----FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172
Query: 970 LFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGI 1029
L D +++FG + + G+ ++PE + K D ++ G+
Sbjct: 173 LIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGV 226
Query: 1030 VLLEILTGRKPVMFTQDEDI 1049
++ E+ G P F D+ I
Sbjct: 227 LIYEMAAGYPP--FFADQPI 244
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ +LH ++H D+KP+NVL + D +++FG ++ E S T G+
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPT 181
Query: 1007 YVSPE---AASTGQPTKEADVYSFGIVLLEILTGRKP 1040
Y++PE + T + D +S G++L L+G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And Potentiation
Of Cytotoxic Drugs By Novel Chk2 Inhibitor Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 950 GLSFLHSLDMVHGDIKPQNVLF---DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ +LH ++H D+KP+NVL + D +++FG ++ E S T G+
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPT 181
Query: 1007 YVSPE---AASTGQPTKEADVYSFGIVLLEILTGRKP 1040
Y++PE + T + D +S G++L L+G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 917 NGNLATLLQ-EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF 975
+ NL ++Q E H+ M +L+ L G+ LHS ++H D+KP N++ +D
Sbjct: 117 DANLCQVIQMELDHER-------MSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDC 168
Query: 976 EAHLSEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034
+ +FGL R A S TP + + Y +PE + D++S G ++ E+
Sbjct: 169 TLKILDFGLART-----AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 223
Query: 1035 LTGRKPVMFTQDEDIVKWVKKQLQRG 1060
+ + ++F + I +W K Q G
Sbjct: 224 VCHK--ILFPGRDYIDQWNKVIEQLG 247
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY
Mimicking Host Substrates
Length = 319
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 947 LARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006
+ + + H +VH D+K +N+L DAD +++FG + T GS
Sbjct: 115 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN----EFTFGNKLDTFCGSPP 170
Query: 1007 YVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061
Y +PE + E DV+S G++L +++G P D +K +++++ RG+
Sbjct: 171 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRGK 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,467,481
Number of Sequences: 62578
Number of extensions: 1142780
Number of successful extensions: 5088
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 2007
Number of HSP's gapped (non-prelim): 1801
length of query: 1133
length of database: 14,973,337
effective HSP length: 109
effective length of query: 1024
effective length of database: 8,152,335
effective search space: 8347991040
effective search space used: 8347991040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)