Query 001171
Match_columns 1133
No_of_seqs 1060 out of 6861
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 17:46:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001171.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001171hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 6E-112 1E-116 1104.6 72.5 912 28-1117 27-954 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.7E-60 3.6E-65 621.2 35.1 499 166-721 70-569 (968)
3 KOG1187 Serine/threonine prote 100.0 2.7E-46 5.9E-51 421.5 27.1 286 824-1117 62-355 (361)
4 KOG0192 Tyrosine kinase specif 100.0 2.4E-44 5.2E-49 401.7 24.2 259 838-1118 42-307 (362)
5 KOG0581 Mitogen-activated prot 100.0 2E-44 4.4E-49 379.2 17.9 250 838-1110 80-335 (364)
6 KOG0615 Serine/threonine prote 100.0 2.4E-44 5.1E-49 379.8 14.5 251 835-1110 170-437 (475)
7 KOG0575 Polo-like serine/threo 100.0 2.6E-43 5.6E-48 391.8 20.7 247 837-1110 18-269 (592)
8 KOG0197 Tyrosine kinases [Sign 100.0 2.3E-43 5E-48 389.5 17.9 260 836-1118 205-465 (468)
9 KOG0595 Serine/threonine-prote 100.0 1E-42 2.2E-47 368.7 20.0 211 836-1056 9-229 (429)
10 KOG0591 NIMA (never in mitosis 100.0 8.1E-44 1.7E-48 356.8 6.9 257 836-1113 18-284 (375)
11 KOG0598 Ribosomal protein S6 k 100.0 1.9E-42 4.1E-47 364.5 16.5 241 836-1102 24-269 (357)
12 KOG0472 Leucine-rich repeat pr 100.0 3.3E-46 7.1E-51 390.5 -13.0 496 89-688 39-541 (565)
13 KOG0593 Predicted protein kina 100.0 7.6E-42 1.6E-46 346.2 14.1 264 837-1109 2-283 (396)
14 KOG0472 Leucine-rich repeat pr 100.0 1.3E-44 2.8E-49 378.5 -12.2 478 187-712 43-541 (565)
15 KOG4194 Membrane glycoprotein 100.0 3.5E-42 7.6E-47 375.2 5.7 389 159-554 46-439 (873)
16 KOG0661 MAPK related serine/th 100.0 3.9E-41 8.4E-46 361.7 12.2 266 835-1111 8-292 (538)
17 KOG0196 Tyrosine kinase, EPH ( 100.0 3.8E-41 8.2E-46 379.4 12.5 279 821-1121 604-898 (996)
18 KOG0592 3-phosphoinositide-dep 100.0 2.9E-40 6.3E-45 360.5 18.0 252 835-1110 71-338 (604)
19 KOG1026 Nerve growth factor re 100.0 7E-41 1.5E-45 387.2 13.7 266 836-1120 485-768 (774)
20 KOG0193 Serine/threonine prote 100.0 1.7E-40 3.8E-45 366.5 14.2 276 831-1130 386-667 (678)
21 KOG0198 MEKK and related serin 100.0 3.4E-40 7.4E-45 356.1 16.0 261 837-1116 17-282 (313)
22 KOG4194 Membrane glycoprotein 100.0 1.8E-41 4E-46 369.6 4.0 403 291-716 53-456 (873)
23 KOG0659 Cdk activating kinase 100.0 2.2E-39 4.8E-44 323.5 17.5 263 837-1110 2-281 (318)
24 KOG0600 Cdc2-related protein k 100.0 5.2E-39 1.1E-43 347.9 20.8 268 836-1110 116-400 (560)
25 KOG0605 NDR and related serine 100.0 7.4E-39 1.6E-43 350.4 20.4 255 835-1110 139-445 (550)
26 KOG0616 cAMP-dependent protein 100.0 3E-39 6.4E-44 327.3 15.5 209 836-1056 43-256 (355)
27 KOG0582 Ste20-like serine/thre 100.0 2.3E-38 5.1E-43 337.6 21.0 274 835-1121 24-306 (516)
28 KOG0583 Serine/threonine prote 100.0 2.1E-38 4.6E-43 358.1 21.4 254 835-1115 15-279 (370)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.2E-38 4.7E-43 363.4 21.5 265 835-1116 5-336 (338)
30 KOG0578 p21-activated serine/t 100.0 4.9E-39 1.1E-43 354.9 15.4 250 835-1110 271-523 (550)
31 KOG0597 Serine-threonine prote 100.0 5.2E-39 1.1E-43 349.5 14.6 246 837-1110 2-251 (808)
32 KOG0588 Serine/threonine prote 100.0 1.2E-38 2.7E-43 354.5 17.2 246 838-1111 13-264 (786)
33 KOG0033 Ca2+/calmodulin-depend 100.0 1.3E-39 2.7E-44 319.9 6.2 252 835-1111 9-268 (355)
34 KOG0663 Protein kinase PITSLRE 100.0 8.2E-38 1.8E-42 321.3 18.5 265 836-1110 75-361 (419)
35 KOG0611 Predicted serine/threo 100.0 1.7E-38 3.7E-43 331.9 12.8 248 835-1111 51-304 (668)
36 KOG2052 Activin A type IB rece 100.0 1.2E-37 2.6E-42 332.0 19.1 274 832-1121 206-510 (513)
37 KOG0580 Serine/threonine prote 100.0 3.5E-38 7.5E-43 310.5 12.6 249 836-1111 21-274 (281)
38 KOG0194 Protein tyrosine kinas 100.0 3.7E-38 7.9E-43 354.9 13.8 265 832-1120 152-426 (474)
39 KOG4721 Serine/threonine prote 100.0 1.4E-38 3E-43 345.6 9.7 242 841-1115 128-369 (904)
40 KOG1095 Protein tyrosine kinas 100.0 1.1E-37 2.4E-42 374.2 18.2 265 836-1119 691-966 (1025)
41 KOG0658 Glycogen synthase kina 100.0 5.1E-38 1.1E-42 330.1 12.7 264 838-1110 25-306 (364)
42 KOG0585 Ca2+/calmodulin-depend 100.0 1.7E-37 3.6E-42 332.9 15.9 266 834-1120 94-382 (576)
43 PHA02988 hypothetical protein; 100.0 8.2E-37 1.8E-41 340.1 21.9 246 843-1116 26-281 (283)
44 KOG0694 Serine/threonine prote 100.0 2.5E-37 5.3E-42 347.8 17.5 242 835-1104 366-613 (694)
45 KOG0594 Protein kinase PCTAIRE 100.0 1.3E-36 2.8E-41 321.0 20.6 273 836-1115 10-309 (323)
46 KOG0660 Mitogen-activated prot 100.0 6.1E-37 1.3E-41 321.4 15.9 279 833-1121 18-323 (359)
47 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3E-36 6.6E-41 331.3 22.1 252 837-1112 4-256 (256)
48 KOG1094 Discoidin domain recep 100.0 4.2E-36 9.1E-41 328.1 22.5 266 834-1114 535-804 (807)
49 cd05104 PTKc_Kit Catalytic dom 100.0 3.1E-36 6.7E-41 349.0 22.9 260 835-1113 33-373 (375)
50 cd05096 PTKc_DDR1 Catalytic do 100.0 4.7E-36 1E-40 338.6 23.8 266 836-1113 4-304 (304)
51 cd05612 STKc_PRKX_like Catalyt 100.0 7.6E-37 1.6E-41 342.4 16.4 244 837-1110 1-254 (291)
52 cd05631 STKc_GRK4 Catalytic do 100.0 2.9E-36 6.2E-41 336.7 21.0 250 839-1110 2-261 (285)
53 cd05106 PTKc_CSF-1R Catalytic 100.0 2.7E-36 5.8E-41 349.1 21.0 262 835-1114 36-372 (374)
54 cd05072 PTKc_Lyn Catalytic dom 100.0 5.7E-36 1.2E-40 330.1 22.0 256 836-1114 5-261 (261)
55 KOG3653 Transforming growth fa 100.0 5.5E-36 1.2E-40 321.8 21.0 261 838-1119 211-508 (534)
56 KOG0589 Serine/threonine prote 100.0 1E-36 2.2E-41 336.4 15.2 252 836-1110 3-258 (426)
57 PTZ00263 protein kinase A cata 100.0 1.8E-36 3.9E-41 345.2 17.3 244 837-1110 18-271 (329)
58 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-35 2.9E-40 327.1 23.0 256 836-1114 5-261 (261)
59 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.7E-36 1.7E-40 329.9 20.9 254 837-1114 5-265 (266)
60 cd05054 PTKc_VEGFR Catalytic d 100.0 5.1E-36 1.1E-40 342.1 19.9 265 835-1116 5-335 (337)
61 KOG0618 Serine/threonine phosp 100.0 8.3E-39 1.8E-43 367.9 -3.1 503 124-709 3-510 (1081)
62 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.2E-36 1.1E-40 342.6 19.6 252 837-1110 1-257 (333)
63 KOG0599 Phosphorylase kinase g 100.0 1.3E-36 2.9E-41 303.0 12.6 250 836-1110 16-283 (411)
64 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.2E-35 2.7E-40 326.3 21.5 252 837-1112 4-256 (256)
65 KOG0201 Serine/threonine prote 100.0 1.6E-37 3.5E-42 331.7 5.9 249 836-1110 12-263 (467)
66 KOG0032 Ca2+/calmodulin-depend 100.0 1.3E-35 2.8E-40 334.7 21.6 250 835-1110 33-293 (382)
67 cd05571 STKc_PKB Catalytic dom 100.0 4.5E-36 9.8E-41 341.2 18.0 241 843-1110 1-251 (323)
68 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.4E-35 3E-40 331.8 21.5 265 837-1110 5-285 (288)
69 KOG0610 Putative serine/threon 100.0 8.2E-36 1.8E-40 316.0 18.0 253 837-1110 77-392 (459)
70 cd05048 PTKc_Ror Catalytic Dom 100.0 2.2E-35 4.8E-40 329.7 22.2 259 837-1114 5-283 (283)
71 PTZ00426 cAMP-dependent protei 100.0 5.5E-36 1.2E-40 341.7 17.5 244 837-1110 30-284 (340)
72 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.7E-35 5.8E-40 341.6 22.9 263 835-1116 35-399 (400)
73 cd05108 PTKc_EGFR Catalytic do 100.0 2.4E-35 5.2E-40 334.6 21.8 259 837-1119 7-273 (316)
74 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.4E-35 3.1E-40 340.4 20.0 266 838-1110 1-290 (338)
75 cd05059 PTKc_Tec_like Catalyti 100.0 3.4E-35 7.4E-40 322.8 21.9 251 838-1112 5-256 (256)
76 cd07848 STKc_CDKL5 Catalytic d 100.0 2.7E-35 5.9E-40 329.7 21.3 266 837-1110 1-284 (287)
77 cd05052 PTKc_Abl Catalytic dom 100.0 3.6E-35 7.7E-40 324.1 21.7 255 837-1114 6-262 (263)
78 PLN00034 mitogen-activated pro 100.0 2.3E-35 5.1E-40 339.8 21.0 247 837-1110 74-328 (353)
79 cd05585 STKc_YPK1_like Catalyt 100.0 1.5E-35 3.3E-40 335.3 19.1 239 845-1110 1-247 (312)
80 cd05049 PTKc_Trk Catalytic dom 100.0 3.6E-35 7.8E-40 327.4 21.8 259 836-1113 4-280 (280)
81 cd07862 STKc_CDK6 Catalytic do 100.0 4.2E-35 9.1E-40 328.7 22.3 263 837-1109 1-286 (290)
82 cd05116 PTKc_Syk Catalytic dom 100.0 5E-35 1.1E-39 321.8 22.4 247 844-1114 2-255 (257)
83 cd06649 PKc_MEK2 Catalytic dom 100.0 4.7E-35 1E-39 334.1 22.9 204 836-1050 4-211 (331)
84 cd05067 PTKc_Lck_Blk Catalytic 100.0 6E-35 1.3E-39 321.7 22.9 254 836-1113 5-259 (260)
85 KOG0618 Serine/threonine phosp 100.0 1.7E-38 3.7E-43 365.4 -5.7 483 171-711 4-488 (1081)
86 cd05595 STKc_PKB_beta Catalyti 100.0 1.9E-35 4.1E-40 335.9 19.1 241 843-1110 1-251 (323)
87 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.9E-35 6.4E-40 324.5 20.1 256 835-1114 4-261 (261)
88 PF07714 Pkinase_Tyr: Protein 100.0 9.5E-36 2.1E-40 327.4 15.9 249 841-1111 3-259 (259)
89 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.3E-35 1.6E-39 321.1 22.8 254 836-1113 5-259 (260)
90 cd05593 STKc_PKB_gamma Catalyt 100.0 2.4E-35 5.3E-40 335.6 19.3 241 843-1110 1-251 (328)
91 cd05071 PTKc_Src Catalytic dom 100.0 8E-35 1.7E-39 321.0 22.2 255 836-1114 5-260 (262)
92 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-34 2.4E-39 320.8 23.1 255 837-1114 4-265 (266)
93 KOG4278 Protein tyrosine kinas 100.0 9.5E-36 2.1E-40 325.7 14.1 264 830-1116 260-525 (1157)
94 KOG0199 ACK and related non-re 100.0 1E-35 2.2E-40 330.6 14.7 266 838-1125 111-383 (1039)
95 cd05584 STKc_p70S6K Catalytic 100.0 4.2E-35 9.1E-40 333.2 20.1 241 843-1110 2-256 (323)
96 cd05626 STKc_LATS2 Catalytic d 100.0 3.5E-35 7.6E-40 341.7 19.8 253 838-1110 2-305 (381)
97 cd05628 STKc_NDR1 Catalytic do 100.0 5.6E-35 1.2E-39 337.8 21.3 211 837-1053 1-248 (363)
98 cd07869 STKc_PFTAIRE1 Catalyti 100.0 9.2E-35 2E-39 327.8 22.4 266 836-1110 4-288 (303)
99 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-34 2.3E-39 324.0 22.7 258 837-1113 5-282 (283)
100 cd05082 PTKc_Csk Catalytic dom 100.0 1.1E-34 2.4E-39 318.9 22.2 251 836-1114 5-256 (256)
101 cd05605 STKc_GRK4_like Catalyt 100.0 6.3E-35 1.4E-39 325.9 20.4 251 838-1110 1-261 (285)
102 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.5E-35 3.2E-40 341.9 15.8 253 837-1110 1-285 (350)
103 cd05062 PTKc_IGF-1R Catalytic 100.0 9.9E-35 2.1E-39 323.3 21.9 260 835-1113 4-277 (277)
104 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.6E-35 1.2E-39 335.0 20.3 264 836-1116 6-341 (343)
105 cd06650 PKc_MEK1 Catalytic dom 100.0 1E-34 2.3E-39 331.1 22.3 201 836-1047 4-208 (333)
106 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-34 3.1E-39 318.7 22.5 253 837-1113 6-259 (260)
107 cd05629 STKc_NDR_like_fungal C 100.0 3.1E-35 6.8E-40 342.0 17.8 253 837-1110 1-305 (377)
108 cd05093 PTKc_TrkB Catalytic do 100.0 1.1E-34 2.5E-39 324.6 21.4 263 836-1117 4-282 (288)
109 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-34 3.4E-39 318.7 22.0 256 835-1113 4-260 (261)
110 cd05599 STKc_NDR_like Catalyti 100.0 3.2E-35 6.9E-40 340.7 17.3 253 837-1110 1-296 (364)
111 cd05592 STKc_nPKC_theta_delta 100.0 9.2E-35 2E-39 329.2 20.5 240 843-1109 1-247 (316)
112 KOG0604 MAP kinase-activated p 100.0 2.1E-35 4.6E-40 298.8 13.3 254 835-1110 59-322 (400)
113 KOG2345 Serine/threonine prote 100.0 2.8E-35 6E-40 291.2 13.8 266 835-1115 19-301 (302)
114 PTZ00283 serine/threonine prot 100.0 9.4E-35 2E-39 346.4 21.3 257 835-1110 30-297 (496)
115 cd05115 PTKc_Zap-70 Catalytic 100.0 2.3E-34 4.9E-39 316.3 22.7 248 844-1114 2-255 (257)
116 cd05614 STKc_MSK2_N N-terminal 100.0 6E-35 1.3E-39 333.8 18.9 251 838-1110 1-267 (332)
117 cd05075 PTKc_Axl Catalytic dom 100.0 1.8E-34 4E-39 320.3 22.2 258 839-1114 1-271 (272)
118 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.7E-34 3.7E-39 334.5 22.8 262 835-1114 35-399 (401)
119 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-34 4.1E-39 318.4 22.1 252 837-1110 2-260 (263)
120 cd05587 STKc_cPKC Catalytic do 100.0 8.9E-35 1.9E-39 330.9 20.1 246 838-1110 1-257 (324)
121 cd05596 STKc_ROCK Catalytic do 100.0 6.2E-35 1.3E-39 337.4 19.0 252 836-1110 42-304 (370)
122 cd05589 STKc_PKN Catalytic dom 100.0 8.2E-35 1.8E-39 331.2 19.6 244 839-1110 1-257 (324)
123 PTZ00036 glycogen synthase kin 100.0 1.2E-34 2.7E-39 341.5 21.6 267 835-1110 64-351 (440)
124 cd05066 PTKc_EphR_A Catalytic 100.0 1.8E-34 3.9E-39 319.3 21.6 256 837-1114 4-266 (267)
125 cd05035 PTKc_Axl_like Catalyti 100.0 3.6E-34 7.8E-39 318.1 24.1 258 839-1114 1-272 (273)
126 KOG0577 Serine/threonine prote 100.0 1.2E-35 2.6E-40 324.0 11.9 246 837-1111 26-279 (948)
127 cd05591 STKc_nPKC_epsilon Cata 100.0 8.3E-35 1.8E-39 330.7 19.3 241 843-1110 1-254 (321)
128 KOG0667 Dual-specificity tyros 100.0 1.5E-34 3.2E-39 326.4 21.0 262 838-1110 187-502 (586)
129 cd05111 PTK_HER3 Pseudokinase 100.0 2.2E-34 4.7E-39 320.6 22.2 258 837-1118 7-272 (279)
130 cd05060 PTKc_Syk_like Catalyti 100.0 2.8E-34 6.1E-39 315.8 22.8 249 843-1115 1-256 (257)
131 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.1E-34 4.5E-39 321.8 22.0 267 839-1115 6-282 (283)
132 cd05094 PTKc_TrkC Catalytic do 100.0 1.6E-34 3.4E-39 324.0 21.1 261 837-1116 5-284 (291)
133 PTZ00267 NIMA-related protein 100.0 1.1E-34 2.3E-39 346.2 20.9 252 838-1109 68-322 (478)
134 cd05040 PTKc_Ack_like Catalyti 100.0 2.4E-34 5.2E-39 316.4 22.1 249 843-1112 1-256 (257)
135 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.8E-34 4E-39 319.5 21.2 256 837-1114 5-267 (268)
136 cd05590 STKc_nPKC_eta Catalyti 100.0 7.8E-35 1.7E-39 330.4 18.7 241 843-1110 1-253 (320)
137 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.3E-34 5.1E-39 320.2 22.1 259 836-1113 5-277 (277)
138 cd05621 STKc_ROCK2 Catalytic d 100.0 8.2E-35 1.8E-39 335.9 19.1 253 835-1110 41-304 (370)
139 PHA03212 serine/threonine kina 100.0 1.4E-34 3.1E-39 335.5 21.2 194 836-1043 91-285 (391)
140 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-34 2.4E-39 328.6 19.4 239 843-1108 1-246 (316)
141 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-34 2.6E-39 328.1 19.7 240 843-1109 1-247 (316)
142 cd05073 PTKc_Hck Catalytic dom 100.0 2.9E-34 6.4E-39 316.2 22.3 254 836-1113 5-259 (260)
143 cd05051 PTKc_DDR Catalytic dom 100.0 4.3E-34 9.4E-39 321.5 24.1 266 836-1113 4-296 (296)
144 cd05601 STKc_CRIK Catalytic do 100.0 2.7E-35 5.8E-40 336.4 14.4 252 837-1110 1-263 (330)
145 PRK13184 pknD serine/threonine 100.0 1.8E-34 3.9E-39 350.3 22.1 264 837-1117 2-293 (932)
146 KOG1989 ARK protein kinase fam 100.0 3.9E-35 8.5E-40 341.9 15.7 262 836-1120 36-317 (738)
147 cd05043 PTK_Ryk Pseudokinase d 100.0 2.2E-34 4.8E-39 321.0 21.2 263 836-1116 5-278 (280)
148 cd05594 STKc_PKB_alpha Catalyt 100.0 4.8E-35 1E-39 333.2 16.1 241 843-1110 1-252 (325)
149 KOG4257 Focal adhesion tyrosin 100.0 3E-35 6.5E-40 322.9 13.6 257 835-1116 387-651 (974)
150 cd05091 PTKc_Ror2 Catalytic do 100.0 2.7E-34 5.9E-39 320.9 21.7 257 838-1113 6-282 (283)
151 cd05045 PTKc_RET Catalytic dom 100.0 2.8E-34 6.1E-39 321.8 21.9 260 838-1116 1-288 (290)
152 cd06637 STKc_TNIK Catalytic do 100.0 2.4E-34 5.2E-39 319.4 20.8 254 835-1110 4-269 (272)
153 cd05053 PTKc_FGFR Catalytic do 100.0 3E-34 6.4E-39 322.3 21.8 262 835-1115 10-292 (293)
154 cd05032 PTKc_InsR_like Catalyt 100.0 3.2E-34 6.9E-39 319.3 21.8 259 836-1113 5-277 (277)
155 cd05598 STKc_LATS Catalytic do 100.0 7E-35 1.5E-39 339.1 17.0 253 837-1110 1-301 (376)
156 cd05084 PTKc_Fes Catalytic dom 100.0 4E-34 8.6E-39 313.7 21.9 248 843-1113 1-252 (252)
157 cd05607 STKc_GRK7 Catalytic do 100.0 2.9E-34 6.4E-39 319.1 21.1 249 845-1114 1-254 (277)
158 KOG0444 Cytoskeletal regulator 100.0 4.2E-37 9.1E-42 336.6 -1.7 366 290-688 7-375 (1255)
159 cd05616 STKc_cPKC_beta Catalyt 100.0 1.7E-34 3.7E-39 328.4 19.7 245 838-1109 1-256 (323)
160 cd07876 STKc_JNK2 Catalytic do 100.0 5.2E-34 1.1E-38 329.6 23.8 265 835-1111 19-316 (359)
161 cd05089 PTKc_Tie1 Catalytic do 100.0 2.3E-34 4.9E-39 323.6 20.2 263 837-1121 2-282 (297)
162 cd05625 STKc_LATS1 Catalytic d 100.0 1.5E-34 3.2E-39 337.0 19.2 252 838-1110 2-305 (382)
163 cd08228 STKc_Nek6 Catalytic do 100.0 2.9E-34 6.2E-39 317.8 20.4 260 837-1115 2-266 (267)
164 cd05112 PTKc_Itk Catalytic dom 100.0 4.2E-34 9E-39 314.3 21.6 252 837-1112 4-256 (256)
165 cd05095 PTKc_DDR2 Catalytic do 100.0 8.4E-34 1.8E-38 318.9 24.5 266 836-1113 4-296 (296)
166 KOG4717 Serine/threonine prote 100.0 6.1E-35 1.3E-39 313.6 14.2 247 837-1110 18-270 (864)
167 PTZ00284 protein kinase; Provi 100.0 3E-34 6.4E-39 342.6 21.7 264 835-1110 127-438 (467)
168 cd05061 PTKc_InsR Catalytic do 100.0 4.3E-34 9.2E-39 320.0 21.6 262 835-1115 4-279 (288)
169 KOG0574 STE20-like serine/thre 100.0 1.5E-36 3.3E-41 305.9 1.6 248 838-1110 34-283 (502)
170 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.6E-34 5.5E-39 321.3 19.6 269 837-1114 4-283 (284)
171 cd05088 PTKc_Tie2 Catalytic do 100.0 3.2E-34 6.9E-39 323.2 20.3 262 836-1119 6-285 (303)
172 cd07868 STKc_CDK8 Catalytic do 100.0 7.8E-34 1.7E-38 322.7 23.6 200 842-1043 6-218 (317)
173 cd07875 STKc_JNK1 Catalytic do 100.0 7.8E-34 1.7E-38 328.8 24.0 264 835-1110 22-318 (364)
174 cd05608 STKc_GRK1 Catalytic do 100.0 4E-34 8.7E-39 318.5 20.7 247 845-1110 1-257 (280)
175 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.7E-34 7.9E-39 323.6 20.7 263 836-1117 17-302 (307)
176 cd05570 STKc_PKC Catalytic dom 100.0 2.2E-34 4.8E-39 326.6 18.9 241 843-1110 1-252 (318)
177 cd05097 PTKc_DDR_like Catalyti 100.0 1E-33 2.2E-38 318.0 24.2 266 836-1113 4-295 (295)
178 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.8E-33 3.9E-38 311.6 25.7 255 843-1112 1-268 (269)
179 cd05588 STKc_aPKC Catalytic do 100.0 2.7E-34 5.9E-39 327.3 19.5 245 843-1110 1-262 (329)
180 KOG1025 Epidermal growth facto 100.0 1.2E-34 2.7E-39 327.5 16.3 256 839-1118 698-961 (1177)
181 cd06651 STKc_MEKK3 Catalytic d 100.0 6E-34 1.3E-38 314.9 21.5 251 838-1110 3-261 (266)
182 cd05109 PTKc_HER2 Catalytic do 100.0 5.6E-34 1.2E-38 317.6 21.3 259 836-1118 6-272 (279)
183 cd05055 PTKc_PDGFR Catalytic d 100.0 6.4E-34 1.4E-38 320.4 21.9 259 835-1114 33-301 (302)
184 cd05039 PTKc_Csk_like Catalyti 100.0 8.5E-34 1.8E-38 311.9 22.3 250 836-1113 5-255 (256)
185 KOG0444 Cytoskeletal regulator 100.0 6.9E-37 1.5E-41 334.9 -2.3 365 92-517 4-372 (1255)
186 cd05582 STKc_RSK_N N-terminal 100.0 8.9E-35 1.9E-39 330.1 14.9 237 843-1106 2-245 (318)
187 cd05101 PTKc_FGFR2 Catalytic d 100.0 5E-34 1.1E-38 322.1 20.9 262 836-1116 14-298 (304)
188 cd05622 STKc_ROCK1 Catalytic d 100.0 2.1E-34 4.6E-39 332.9 18.2 254 835-1111 41-305 (371)
189 KOG0666 Cyclin C-dependent kin 100.0 7.8E-35 1.7E-39 295.8 12.6 277 834-1111 21-338 (438)
190 cd05042 PTKc_Aatyk Catalytic d 100.0 1.4E-33 3.1E-38 312.5 24.0 254 843-1111 1-267 (269)
191 cd05085 PTKc_Fer Catalytic dom 100.0 1.2E-33 2.5E-38 309.6 22.8 246 843-1112 1-249 (250)
192 cd05618 STKc_aPKC_iota Catalyt 100.0 3.3E-34 7.1E-39 326.5 19.1 245 843-1110 1-262 (329)
193 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 9.1E-34 2E-38 316.7 22.1 260 838-1114 5-283 (284)
194 cd08529 STKc_FA2-like Catalyti 100.0 8.9E-34 1.9E-38 311.7 21.5 249 838-1110 1-253 (256)
195 cd05058 PTKc_Met_Ron Catalytic 100.0 8.2E-34 1.8E-38 313.2 21.3 252 843-1115 1-260 (262)
196 cd05615 STKc_cPKC_alpha Cataly 100.0 5.4E-34 1.2E-38 324.0 20.2 240 838-1104 1-246 (323)
197 KOG4279 Serine/threonine prote 100.0 3.3E-35 7.1E-40 325.4 9.7 245 843-1109 581-831 (1226)
198 cd05065 PTKc_EphR_B Catalytic 100.0 6.3E-34 1.4E-38 315.3 20.1 256 837-1114 4-268 (269)
199 cd05602 STKc_SGK1 Catalytic do 100.0 3.4E-34 7.3E-39 326.3 18.1 239 843-1108 1-245 (325)
200 cd07874 STKc_JNK3 Catalytic do 100.0 1E-33 2.2E-38 326.8 22.2 264 834-1110 14-311 (355)
201 cd05627 STKc_NDR2 Catalytic do 100.0 2.6E-34 5.7E-39 332.0 17.2 253 837-1110 1-293 (360)
202 cd05575 STKc_SGK Catalytic dom 100.0 3.7E-34 8E-39 325.7 18.1 236 843-1105 1-242 (323)
203 cd00192 PTKc Catalytic domain 100.0 1.8E-33 3.9E-38 310.2 23.1 251 843-1112 1-262 (262)
204 cd07863 STKc_CDK4 Catalytic do 100.0 1.4E-33 2.9E-38 316.1 22.4 265 838-1110 1-285 (288)
205 cd05092 PTKc_TrkA Catalytic do 100.0 1.1E-33 2.4E-38 315.2 21.6 258 837-1113 5-280 (280)
206 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9.5E-34 2.1E-38 320.5 21.3 265 837-1110 6-286 (309)
207 cd05099 PTKc_FGFR4 Catalytic d 100.0 9.4E-34 2E-38 321.2 21.2 264 836-1118 11-297 (314)
208 cd08229 STKc_Nek7 Catalytic do 100.0 6.4E-34 1.4E-38 315.0 19.3 259 837-1114 2-265 (267)
209 cd05632 STKc_GRK5 Catalytic do 100.0 1.4E-33 2.9E-38 315.2 22.0 251 838-1110 1-261 (285)
210 cd07853 STKc_NLK Catalytic dom 100.0 6.2E-34 1.3E-38 330.4 19.7 263 838-1110 1-288 (372)
211 cd05050 PTKc_Musk Catalytic do 100.0 1.5E-33 3.3E-38 315.6 22.1 259 836-1113 4-288 (288)
212 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.1E-33 4.5E-38 310.9 22.8 260 837-1115 2-266 (267)
213 cd05630 STKc_GRK6 Catalytic do 100.0 1.2E-33 2.7E-38 315.4 21.0 251 838-1110 1-261 (285)
214 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.7E-33 3.8E-38 321.9 22.4 263 836-1117 11-296 (334)
215 cd06615 PKc_MEK Catalytic doma 100.0 2.8E-33 6E-38 316.3 23.7 263 837-1111 1-288 (308)
216 cd05623 STKc_MRCK_alpha Cataly 100.0 1.8E-33 4E-38 321.1 21.9 254 837-1110 1-266 (332)
217 cd08223 STKc_Nek4 Catalytic do 100.0 2.5E-33 5.5E-38 308.3 22.1 250 838-1110 1-254 (257)
218 PF00069 Pkinase: Protein kina 100.0 7.8E-34 1.7E-38 312.9 18.0 252 839-1110 1-257 (260)
219 cd06652 STKc_MEKK2 Catalytic d 100.0 2.5E-33 5.3E-38 309.9 22.0 252 837-1110 2-261 (265)
220 cd06646 STKc_MAP4K5 Catalytic 100.0 9.2E-34 2E-38 313.7 18.6 254 836-1111 8-266 (267)
221 cd05597 STKc_DMPK_like Catalyt 100.0 1.7E-33 3.6E-38 321.1 21.2 254 837-1110 1-266 (331)
222 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-33 2.9E-38 315.1 20.0 260 829-1110 8-279 (282)
223 cd06631 STKc_YSK4 Catalytic do 100.0 2.5E-33 5.5E-38 309.8 21.9 251 838-1109 1-261 (265)
224 PHA03207 serine/threonine kina 100.0 1.4E-33 3.1E-38 329.0 20.9 262 836-1110 91-375 (392)
225 cd05047 PTKc_Tie Catalytic dom 100.0 2.3E-33 5E-38 310.9 21.5 250 843-1114 1-268 (270)
226 cd07867 STKc_CDC2L6 Catalytic 100.0 3.2E-33 6.9E-38 317.8 23.0 200 842-1043 6-218 (317)
227 cd05603 STKc_SGK2 Catalytic do 100.0 6.8E-34 1.5E-38 323.3 17.4 236 843-1105 1-242 (321)
228 cd05056 PTKc_FAK Catalytic dom 100.0 2E-33 4.2E-38 311.6 20.6 256 837-1117 6-268 (270)
229 cd05046 PTK_CCK4 Pseudokinase 100.0 2.8E-33 6E-38 311.3 21.5 258 837-1113 5-275 (275)
230 cd06619 PKc_MKK5 Catalytic dom 100.0 1.8E-33 3.8E-38 313.4 19.9 248 837-1111 1-254 (279)
231 cd05057 PTKc_EGFR_like Catalyt 100.0 3.6E-33 7.9E-38 311.0 22.2 257 836-1116 6-270 (279)
232 PHA03211 serine/threonine kina 100.0 5.9E-33 1.3E-37 325.2 25.0 263 836-1110 168-455 (461)
233 cd08219 STKc_Nek3 Catalytic do 100.0 1.6E-33 3.4E-38 309.5 19.0 249 838-1110 1-252 (255)
234 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.5E-33 3.3E-38 320.8 19.4 245 843-1110 1-260 (327)
235 cd06638 STKc_myosinIIIA Cataly 100.0 1.8E-33 4E-38 314.7 19.7 261 832-1111 13-284 (286)
236 cd06654 STKc_PAK1 Catalytic do 100.0 2.5E-33 5.5E-38 314.7 20.9 250 836-1110 19-270 (296)
237 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.2E-33 9.2E-38 308.4 22.3 250 838-1110 1-264 (267)
238 cd06639 STKc_myosinIIIB Cataly 100.0 2.7E-33 5.8E-38 314.2 20.9 260 832-1110 17-287 (291)
239 cd05624 STKc_MRCK_beta Catalyt 100.0 1.7E-33 3.6E-38 321.1 19.5 254 837-1110 1-266 (331)
240 cd05604 STKc_SGK3 Catalytic do 100.0 6.7E-34 1.5E-38 323.8 16.1 237 843-1106 1-243 (325)
241 PHA03209 serine/threonine kina 100.0 5.3E-33 1.1E-37 320.2 23.7 193 834-1041 63-256 (357)
242 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.2E-33 6.9E-38 310.2 21.0 238 844-1112 2-274 (274)
243 KOG0584 Serine/threonine prote 100.0 2.3E-34 5E-39 320.9 11.6 242 841-1110 44-296 (632)
244 PTZ00266 NIMA-related protein 100.0 3.8E-33 8.3E-38 339.7 23.0 253 835-1109 11-294 (1021)
245 cd05044 PTKc_c-ros Catalytic d 100.0 3.4E-33 7.4E-38 309.5 20.6 252 843-1113 1-269 (269)
246 cd05110 PTKc_HER4 Catalytic do 100.0 3.1E-33 6.8E-38 315.2 20.3 260 836-1119 6-273 (303)
247 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.2E-33 1.1E-37 306.2 21.4 238 843-1112 1-259 (259)
248 cd05083 PTKc_Chk Catalytic dom 100.0 4.1E-33 8.9E-38 306.0 20.4 247 837-1113 6-253 (254)
249 cd07847 STKc_CDKL1_4 Catalytic 100.0 6.4E-33 1.4E-37 310.4 22.2 265 837-1110 1-283 (286)
250 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4E-33 8.7E-38 311.7 20.4 261 837-1114 4-283 (284)
251 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.8E-33 1.5E-37 305.4 21.9 239 843-1112 1-262 (262)
252 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.7E-33 3.6E-38 323.5 17.7 262 833-1110 11-298 (343)
253 cd06612 STKc_MST1_2 Catalytic 100.0 5E-33 1.1E-37 305.7 20.7 250 837-1110 3-253 (256)
254 cd06632 STKc_MEKK1_plant Catal 100.0 4.8E-33 1E-37 306.2 20.4 247 838-1110 1-255 (258)
255 cd05041 PTKc_Fes_like Catalyti 100.0 9.2E-33 2E-37 302.7 22.5 248 843-1113 1-251 (251)
256 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.3E-33 1.2E-37 313.2 20.9 266 836-1110 5-286 (301)
257 cd05074 PTKc_Tyro3 Catalytic d 100.0 9.3E-33 2E-37 306.7 22.4 258 839-1114 1-272 (273)
258 KOG0596 Dual specificity; seri 100.0 7E-33 1.5E-37 302.4 20.5 252 836-1110 360-627 (677)
259 cd08528 STKc_Nek10 Catalytic d 100.0 1E-32 2.2E-37 305.7 22.4 254 838-1113 1-269 (269)
260 cd06609 STKc_MST3_like Catalyt 100.0 6.8E-33 1.5E-37 308.0 21.0 248 837-1110 1-251 (274)
261 cd06626 STKc_MEKK4 Catalytic d 100.0 1E-32 2.2E-37 304.8 21.9 252 838-1109 1-260 (264)
262 cd06643 STKc_SLK Catalytic dom 100.0 7.3E-33 1.6E-37 309.1 20.8 250 839-1111 7-263 (282)
263 cd08227 PK_STRAD_alpha Pseudok 100.0 8.9E-33 1.9E-37 315.0 21.8 202 841-1046 2-215 (327)
264 cd08221 STKc_Nek9 Catalytic do 100.0 1.2E-32 2.6E-37 302.7 22.0 250 838-1111 1-254 (256)
265 cd05574 STKc_phototropin_like 100.0 8.2E-33 1.8E-37 314.1 21.4 254 837-1110 1-289 (316)
266 cd05086 PTKc_Aatyk2 Catalytic 100.0 3E-32 6.5E-37 301.6 25.2 253 844-1112 2-267 (268)
267 KOG0607 MAP kinase-interacting 100.0 2.8E-33 6.1E-38 285.3 15.2 250 843-1109 84-360 (463)
268 cd06655 STKc_PAK2 Catalytic do 100.0 9.8E-33 2.1E-37 309.8 21.3 249 837-1110 19-269 (296)
269 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.3E-33 7.1E-38 307.5 16.8 239 843-1112 1-258 (258)
270 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9E-33 1.9E-37 308.6 20.3 254 837-1115 5-271 (284)
271 cd05586 STKc_Sck1_like Catalyt 100.0 1.9E-33 4.2E-38 320.9 15.2 239 845-1109 1-252 (330)
272 smart00219 TyrKc Tyrosine kina 100.0 1.6E-32 3.5E-37 302.0 21.8 250 839-1111 1-258 (258)
273 cd06645 STKc_MAP4K3 Catalytic 100.0 7.4E-33 1.6E-37 306.5 19.2 253 836-1110 8-265 (267)
274 cd06644 STKc_STK10_LOK Catalyt 100.0 1.4E-32 3E-37 308.5 21.7 252 836-1110 11-269 (292)
275 cd07861 STKc_CDK1_euk Catalyti 100.0 1.3E-32 2.8E-37 307.7 21.4 266 838-1110 1-282 (285)
276 cd06611 STKc_SLK_like Catalyti 100.0 7.4E-33 1.6E-37 308.7 19.2 252 836-1110 4-262 (280)
277 cd05580 STKc_PKA Catalytic dom 100.0 1.3E-32 2.7E-37 308.4 20.8 244 837-1110 1-254 (290)
278 cd06608 STKc_myosinIII_like Ca 100.0 1.8E-32 3.9E-37 304.8 21.9 257 835-1110 4-272 (275)
279 PHA03210 serine/threonine kina 100.0 6.1E-33 1.3E-37 332.0 19.3 203 835-1041 146-368 (501)
280 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1E-32 2.2E-37 308.6 19.9 252 837-1110 1-262 (286)
281 cd06656 STKc_PAK3 Catalytic do 100.0 7.1E-33 1.5E-37 311.3 18.6 250 836-1110 18-269 (297)
282 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.1E-32 4.5E-37 303.8 22.1 254 838-1110 2-269 (272)
283 cd08218 STKc_Nek1 Catalytic do 100.0 1.5E-32 3.2E-37 302.0 20.4 249 838-1110 1-253 (256)
284 KOG0579 Ste20-like serine/thre 100.0 5.5E-34 1.2E-38 312.4 8.7 251 837-1110 32-289 (1187)
285 cd07841 STKc_CDK7 Catalytic do 100.0 2.2E-32 4.8E-37 307.9 21.8 264 838-1110 1-282 (298)
286 cd07839 STKc_CDK5 Catalytic do 100.0 1.3E-32 2.9E-37 307.4 19.8 264 838-1110 1-281 (284)
287 cd07846 STKc_CDKL2_3 Catalytic 100.0 6.6E-33 1.4E-37 310.3 17.3 265 837-1110 1-283 (286)
288 cd08220 STKc_Nek8 Catalytic do 100.0 2.8E-32 6E-37 299.8 21.9 248 838-1110 1-253 (256)
289 cd06624 STKc_ASK Catalytic dom 100.0 1.9E-32 4.1E-37 303.3 20.7 255 835-1110 6-265 (268)
290 KOG0690 Serine/threonine prote 100.0 1.2E-33 2.6E-38 288.1 9.8 247 836-1109 167-423 (516)
291 cd06613 STKc_MAP4K3_like Catal 100.0 4.7E-32 1E-36 299.1 23.1 254 836-1110 2-260 (262)
292 cd07832 STKc_CCRK Catalytic do 100.0 3.2E-32 6.8E-37 304.8 21.8 265 838-1110 1-282 (286)
293 cd07849 STKc_ERK1_2_like Catal 100.0 1.8E-32 3.8E-37 313.8 20.1 275 836-1117 4-301 (336)
294 KOG4645 MAPKKK (MAP kinase kin 100.0 2.2E-34 4.7E-39 342.0 4.3 252 836-1111 1234-1495(1509)
295 cd06642 STKc_STK25-YSK1 Cataly 100.0 1E-32 2.2E-37 307.1 17.3 246 838-1110 5-253 (277)
296 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.1E-32 1.3E-36 299.1 23.4 258 837-1110 1-264 (267)
297 cd07842 STKc_CDK8_like Catalyt 100.0 4.8E-32 1E-36 308.0 23.2 207 838-1045 1-220 (316)
298 cd05609 STKc_MAST Catalytic do 100.0 2.9E-32 6.3E-37 307.8 21.1 255 838-1113 2-273 (305)
299 KOG1035 eIF-2alpha kinase GCN2 100.0 6.4E-33 1.4E-37 328.2 16.0 254 836-1109 478-870 (1351)
300 cd08217 STKc_Nek2 Catalytic do 100.0 5.1E-32 1.1E-36 299.3 22.4 252 838-1110 1-262 (265)
301 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.1E-32 1.8E-36 301.3 24.2 260 837-1110 1-266 (287)
302 cd07844 STKc_PCTAIRE_like Cata 100.0 4.4E-32 9.4E-37 304.4 21.9 265 837-1110 5-288 (291)
303 cd07852 STKc_MAPK15 Catalytic 100.0 5.6E-32 1.2E-36 310.0 23.3 281 835-1125 5-312 (337)
304 cd06640 STKc_MST4 Catalytic do 100.0 2.9E-32 6.3E-37 303.3 20.2 247 837-1110 4-253 (277)
305 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-32 2.9E-37 308.1 17.3 248 838-1110 23-272 (292)
306 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.6E-32 9.9E-37 299.5 21.3 252 837-1110 2-261 (264)
307 cd06630 STKc_MEKK1 Catalytic d 100.0 4.1E-32 8.8E-37 300.7 20.6 253 838-1109 1-263 (268)
308 KOG0586 Serine/threonine prote 100.0 1.1E-32 2.4E-37 307.5 15.4 249 835-1111 54-307 (596)
309 cd06605 PKc_MAPKK Catalytic do 100.0 1.8E-32 3.9E-37 303.0 17.3 251 837-1110 1-257 (265)
310 cd07837 STKc_CdkB_plant Cataly 100.0 6.1E-32 1.3E-36 303.9 21.7 268 837-1110 1-291 (295)
311 cd07845 STKc_CDK10 Catalytic d 100.0 5.8E-32 1.3E-36 306.0 21.6 267 836-1110 6-290 (309)
312 KOG0986 G protein-coupled rece 100.0 4.3E-33 9.3E-38 296.8 11.3 244 837-1103 185-434 (591)
313 cd06614 STKc_PAK Catalytic dom 100.0 6.1E-32 1.3E-36 302.3 21.3 253 835-1110 17-270 (286)
314 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.8E-32 1.3E-36 302.1 21.1 252 837-1110 1-261 (283)
315 cd07850 STKc_JNK Catalytic dom 100.0 8.5E-32 1.8E-36 310.3 23.0 264 835-1110 14-311 (353)
316 cd06607 STKc_TAO Catalytic dom 100.0 6.7E-32 1.4E-36 305.1 21.5 247 836-1111 14-268 (307)
317 cd07843 STKc_CDC2L1 Catalytic 100.0 8.1E-32 1.7E-36 302.5 21.9 266 837-1110 5-290 (293)
318 cd07833 STKc_CDKL Catalytic do 100.0 5.4E-32 1.2E-36 303.2 20.1 266 837-1110 1-285 (288)
319 cd06659 STKc_PAK6 Catalytic do 100.0 3.3E-32 7.2E-37 305.7 18.3 247 839-1110 23-271 (297)
320 cd06917 STKc_NAK1_like Catalyt 100.0 5.3E-32 1.1E-36 301.4 19.8 247 838-1110 2-255 (277)
321 cd07860 STKc_CDK2_3 Catalytic 100.0 6E-32 1.3E-36 302.1 20.3 263 838-1110 1-281 (284)
322 KOG0662 Cyclin-dependent kinas 100.0 3.5E-32 7.5E-37 255.0 15.2 264 838-1110 3-283 (292)
323 cd06635 STKc_TAO1 Catalytic do 100.0 1.4E-31 3.1E-36 303.7 23.6 254 838-1120 26-287 (317)
324 cd06623 PKc_MAPKK_plant_like C 100.0 9.6E-32 2.1E-36 297.0 21.3 251 838-1110 2-256 (264)
325 cd06641 STKc_MST3 Catalytic do 100.0 9.3E-32 2E-36 299.3 21.2 246 838-1110 5-253 (277)
326 cd05578 STKc_Yank1 Catalytic d 100.0 2.4E-32 5.2E-37 300.7 16.2 246 838-1108 1-253 (258)
327 cd05572 STKc_cGK_PKG Catalytic 100.0 9.2E-32 2E-36 296.8 20.8 241 845-1109 1-251 (262)
328 KOG0983 Mitogen-activated prot 100.0 2.2E-32 4.7E-37 273.4 13.9 247 839-1110 94-349 (391)
329 cd05122 PKc_STE Catalytic doma 100.0 1.5E-31 3.2E-36 293.1 21.8 249 838-1110 1-251 (253)
330 cd06647 STKc_PAK_I Catalytic d 100.0 7.1E-32 1.5E-36 302.5 19.4 248 837-1110 19-269 (293)
331 cd07865 STKc_CDK9 Catalytic do 100.0 1.5E-31 3.2E-36 303.1 22.1 269 835-1110 10-307 (310)
332 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.6E-31 3.5E-36 299.7 22.1 267 835-1110 3-288 (291)
333 KOG1024 Receptor-like protein 100.0 4.9E-32 1.1E-36 283.2 15.6 267 830-1114 277-555 (563)
334 cd08225 STKc_Nek5 Catalytic do 100.0 9.1E-32 2E-36 295.9 18.6 249 838-1110 1-254 (257)
335 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-31 2.3E-36 306.9 20.0 282 838-1125 1-306 (330)
336 cd06648 STKc_PAK_II Catalytic 100.0 1.8E-31 3.8E-36 298.1 21.1 248 838-1110 20-269 (285)
337 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-31 2.4E-36 307.3 19.8 277 836-1121 4-304 (337)
338 cd07831 STKc_MOK Catalytic dom 100.0 2.7E-31 5.8E-36 296.6 22.5 262 839-1110 1-279 (282)
339 cd05633 STKc_GRK3 Catalytic do 100.0 2.7E-31 5.9E-36 295.5 22.0 241 844-1110 1-255 (279)
340 KOG4250 TANK binding protein k 100.0 1.9E-32 4.1E-37 309.2 12.6 200 839-1044 15-227 (732)
341 cd06616 PKc_MKK4 Catalytic dom 100.0 1.9E-31 4.2E-36 298.6 20.6 255 838-1110 5-267 (288)
342 cd07836 STKc_Pho85 Catalytic d 100.0 3.1E-31 6.7E-36 296.4 22.1 266 838-1110 1-281 (284)
343 cd06606 STKc_MAPKKK Catalytic 100.0 2.9E-31 6.2E-36 292.1 21.4 252 838-1110 1-257 (260)
344 cd07840 STKc_CDK9_like Catalyt 100.0 4.9E-31 1.1E-35 295.2 23.2 265 839-1110 1-284 (287)
345 PHA02882 putative serine/threo 100.0 5.1E-31 1.1E-35 295.6 23.0 260 836-1112 11-294 (294)
346 cd07835 STKc_CDK1_like Catalyt 100.0 3.9E-31 8.4E-36 295.4 22.0 263 839-1110 1-280 (283)
347 cd08226 PK_STRAD_beta Pseudoki 100.0 7E-31 1.5E-35 299.6 24.4 200 843-1046 4-215 (328)
348 cd07866 STKc_BUR1 Catalytic do 100.0 1.8E-31 4E-36 302.5 19.5 270 836-1110 7-308 (311)
349 cd05577 STKc_GRK Catalytic dom 100.0 3.3E-31 7.2E-36 294.8 20.7 243 845-1109 1-253 (277)
350 cd07864 STKc_CDK12 Catalytic d 100.0 5.5E-31 1.2E-35 297.2 22.8 269 835-1110 5-299 (302)
351 PLN00009 cyclin-dependent kina 100.0 5.7E-31 1.2E-35 295.8 22.7 265 837-1110 2-284 (294)
352 cd06627 STKc_Cdc7_like Catalyt 100.0 4.1E-31 9E-36 290.0 21.0 246 838-1109 1-250 (254)
353 KOG0612 Rho-associated, coiled 100.0 1.8E-32 3.9E-37 321.7 10.6 255 832-1110 70-338 (1317)
354 KOG1006 Mitogen-activated prot 100.0 1.8E-33 3.9E-38 280.3 1.8 252 840-1109 67-326 (361)
355 cd07838 STKc_CDK4_6_like Catal 100.0 9.6E-31 2.1E-35 292.9 24.2 264 839-1110 1-284 (287)
356 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.3E-31 9.3E-36 300.7 21.2 271 834-1117 7-297 (328)
357 cd08216 PK_STRAD Pseudokinase 100.0 5.2E-31 1.1E-35 299.1 21.8 265 840-1110 5-295 (314)
358 cd05579 STKc_MAST_like Catalyt 100.0 1.9E-31 4.1E-36 294.7 17.6 247 845-1113 1-257 (265)
359 cd08215 STKc_Nek Catalytic dom 100.0 4.7E-31 1E-35 290.2 20.6 251 838-1110 1-255 (258)
360 cd07855 STKc_ERK5 Catalytic do 100.0 2.3E-31 5E-36 304.4 18.7 267 836-1111 4-295 (334)
361 cd06657 STKc_PAK4 Catalytic do 100.0 3.6E-31 7.8E-36 296.4 19.8 245 841-1110 24-270 (292)
362 PHA03390 pk1 serine/threonine- 100.0 7.1E-31 1.5E-35 290.1 21.6 246 832-1109 9-261 (267)
363 cd06634 STKc_TAO2 Catalytic do 100.0 4E-31 8.7E-36 298.7 19.9 250 837-1115 15-272 (308)
364 cd05118 STKc_CMGC Catalytic do 100.0 6.2E-31 1.3E-35 293.8 21.2 263 839-1110 1-280 (283)
365 cd08530 STKc_CNK2-like Catalyt 100.0 2.4E-31 5.2E-36 292.3 17.4 249 838-1110 1-253 (256)
366 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.4E-31 1.2E-35 302.3 20.4 270 828-1111 8-301 (345)
367 cd06633 STKc_TAO3 Catalytic do 100.0 1.2E-30 2.6E-35 295.4 22.3 243 839-1110 23-273 (313)
368 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.7E-31 1E-35 302.6 19.2 268 836-1110 4-300 (342)
369 KOG0200 Fibroblast/platelet-de 100.0 5.2E-31 1.1E-35 319.6 20.6 261 836-1114 295-579 (609)
370 cd07879 STKc_p38delta_MAPK13 C 100.0 8.1E-31 1.8E-35 300.6 21.1 266 836-1117 14-306 (342)
371 cd05583 STKc_MSK_N N-terminal 100.0 5E-31 1.1E-35 295.3 18.9 254 838-1113 1-266 (288)
372 cd05581 STKc_PDK1 Catalytic do 100.0 2.8E-31 6E-36 296.1 16.7 250 837-1110 1-277 (280)
373 cd05611 STKc_Rim15_like Cataly 100.0 8.9E-31 1.9E-35 288.6 20.5 242 843-1111 2-249 (260)
374 PTZ00024 cyclin-dependent prot 100.0 1.1E-30 2.3E-35 299.3 21.7 267 837-1110 8-313 (335)
375 cd05613 STKc_MSK1_N N-terminal 100.0 8.5E-31 1.8E-35 293.7 20.4 251 838-1110 1-268 (290)
376 KOG4236 Serine/threonine prote 100.0 6.3E-32 1.4E-36 291.2 10.2 241 842-1108 569-817 (888)
377 cd05606 STKc_beta_ARK Catalyti 100.0 2E-30 4.3E-35 288.5 22.5 241 844-1110 1-255 (278)
378 KOG0671 LAMMER dual specificit 100.0 5.3E-32 1.1E-36 284.6 9.2 264 835-1110 87-406 (415)
379 cd07830 STKc_MAK_like Catalyti 100.0 1.1E-30 2.4E-35 291.8 20.5 263 839-1110 1-280 (283)
380 cd06618 PKc_MKK7 Catalytic dom 100.0 9.2E-31 2E-35 294.2 19.3 252 836-1111 14-274 (296)
381 KOG0669 Cyclin T-dependent kin 100.0 1.3E-32 2.9E-37 271.6 2.9 270 836-1112 16-317 (376)
382 KOG0696 Serine/threonine prote 100.0 1.1E-31 2.4E-36 281.6 9.6 211 836-1055 348-564 (683)
383 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.8E-30 6.1E-35 296.1 21.7 264 833-1109 11-297 (343)
384 cd07857 STKc_MPK1 Catalytic do 100.0 4.1E-30 8.9E-35 293.8 23.0 276 838-1121 1-305 (332)
385 KOG0603 Ribosomal protein S6 k 100.0 2.6E-31 5.7E-36 298.2 12.5 241 835-1111 320-564 (612)
386 KOG0587 Traf2- and Nck-interac 100.0 8E-31 1.7E-35 301.4 16.1 257 832-1110 14-282 (953)
387 cd08222 STKc_Nek11 Catalytic d 100.0 1.4E-30 2.9E-35 287.1 16.9 250 838-1110 1-257 (260)
388 cd07829 STKc_CDK_like Catalyti 100.0 4.3E-30 9.4E-35 286.8 21.0 263 839-1110 1-279 (282)
389 cd05123 STKc_AGC Catalytic dom 100.0 2.4E-30 5.2E-35 283.3 18.5 235 845-1106 1-240 (250)
390 cd05610 STKc_MASTL Catalytic d 100.0 3.7E-30 8E-35 317.5 21.2 145 836-986 3-152 (669)
391 cd07851 STKc_p38 Catalytic dom 100.0 1.7E-30 3.6E-35 298.2 16.0 261 835-1110 13-298 (343)
392 KOG0614 cGMP-dependent protein 100.0 3.6E-31 7.7E-36 285.1 7.0 250 836-1111 419-678 (732)
393 KOG0668 Casein kinase II, alph 100.0 4.4E-30 9.4E-35 250.4 9.6 262 835-1110 36-322 (338)
394 KOG0695 Serine/threonine prote 100.0 1.3E-29 2.7E-34 259.4 13.0 199 835-1042 248-452 (593)
395 KOG0984 Mitogen-activated prot 100.0 4.8E-29 1E-33 239.9 15.8 200 838-1044 47-255 (282)
396 cd05576 STKc_RPK118_like Catal 100.0 3.5E-29 7.5E-34 271.4 16.0 219 848-1104 4-223 (237)
397 KOG0608 Warts/lats-like serine 100.0 2E-29 4.4E-34 277.5 12.3 206 838-1049 630-879 (1034)
398 PLN03225 Serine/threonine-prot 100.0 6.1E-29 1.3E-33 298.5 15.8 263 835-1110 130-450 (566)
399 KOG1151 Tousled-like protein k 100.0 1.9E-29 4.1E-34 266.9 9.7 256 836-1109 462-740 (775)
400 PLN03224 probable serine/threo 100.0 3.4E-28 7.4E-33 283.7 18.9 206 835-1042 143-434 (507)
401 KOG1027 Serine/threonine prote 100.0 2.8E-29 6E-34 287.4 8.0 246 840-1108 512-765 (903)
402 smart00220 S_TKc Serine/Threon 100.0 7.3E-28 1.6E-32 262.0 17.9 236 849-1109 1-240 (244)
403 KOG0664 Nemo-like MAPK-related 100.0 8.5E-30 1.8E-34 254.1 1.0 266 839-1112 55-345 (449)
404 KOG0665 Jun-N-terminal kinase 99.9 1.2E-27 2.7E-32 245.8 11.9 259 837-1110 17-310 (369)
405 KOG1152 Signal transduction se 99.9 1E-27 2.2E-32 262.7 9.7 196 836-1042 560-770 (772)
406 KOG1290 Serine/threonine prote 99.9 3.8E-26 8.3E-31 246.5 15.6 132 836-971 77-221 (590)
407 KOG0670 U4/U6-associated splic 99.9 3.9E-27 8.4E-32 254.8 7.8 268 834-1110 429-746 (752)
408 cd00180 PKc Catalytic domain o 99.9 5.4E-25 1.2E-29 233.5 20.9 210 845-1111 1-215 (215)
409 KOG1167 Serine/threonine prote 99.9 1E-25 2.3E-30 241.1 10.3 199 835-1043 34-280 (418)
410 KOG0576 Mitogen-activated prot 99.9 2.5E-26 5.5E-31 256.2 5.5 252 835-1108 13-269 (829)
411 KOG1345 Serine/threonine kinas 99.9 6E-26 1.3E-30 227.3 7.4 209 835-1055 22-241 (378)
412 smart00221 STYKc Protein kinas 99.9 2.6E-24 5.6E-29 231.2 20.1 198 839-1043 1-202 (225)
413 KOG4237 Extracellular matrix p 99.9 3.5E-27 7.7E-32 248.1 -3.7 387 316-709 68-498 (498)
414 KOG4237 Extracellular matrix p 99.9 9E-27 1.9E-31 245.1 -1.7 405 158-589 60-498 (498)
415 PLN03210 Resistant to P. syrin 99.9 1.5E-23 3.1E-28 273.6 26.1 341 330-685 549-903 (1153)
416 PLN03210 Resistant to P. syrin 99.9 2.7E-23 5.8E-28 271.1 24.6 341 355-710 550-904 (1153)
417 PRK15370 E3 ubiquitin-protein 99.9 8.5E-24 1.8E-28 256.9 15.0 336 24-424 57-428 (754)
418 PRK15387 E3 ubiquitin-protein 99.9 3E-23 6.6E-28 249.9 15.0 264 168-481 204-467 (788)
419 PRK15387 E3 ubiquitin-protein 99.9 5E-23 1.1E-27 248.1 16.1 266 97-410 203-468 (788)
420 PLN00181 protein SPA1-RELATED; 99.9 1.4E-23 3E-28 266.2 10.3 199 888-1110 28-265 (793)
421 smart00750 KIND kinase non-cat 99.9 3.5E-22 7.7E-27 205.7 15.2 168 918-1114 1-169 (176)
422 PRK09188 serine/threonine prot 99.9 3.3E-22 7.1E-27 223.9 14.0 175 835-1025 16-210 (365)
423 KOG1164 Casein kinase (serine/ 99.9 4.3E-21 9.3E-26 216.9 22.2 264 838-1118 19-301 (322)
424 PRK15370 E3 ubiquitin-protein 99.9 2.8E-22 6E-27 243.7 10.0 256 62-376 169-428 (754)
425 KOG0195 Integrin-linked kinase 99.8 4.3E-22 9.3E-27 199.2 5.4 247 839-1114 192-446 (448)
426 KOG1163 Casein kinase (serine/ 99.8 3.9E-21 8.4E-26 189.8 11.1 214 834-1054 12-234 (341)
427 KOG1165 Casein kinase (serine/ 99.8 5.4E-20 1.2E-24 190.1 18.5 211 838-1055 29-250 (449)
428 COG0515 SPS1 Serine/threonine 99.8 8.8E-19 1.9E-23 200.7 23.4 258 839-1110 2-275 (384)
429 KOG0590 Checkpoint kinase and 99.8 1.4E-20 3.1E-25 224.9 5.7 252 840-1109 321-584 (601)
430 PRK10359 lipopolysaccharide co 99.8 8.1E-20 1.8E-24 189.6 9.7 181 825-1035 17-216 (232)
431 KOG1240 Protein kinase contain 99.8 2.2E-20 4.7E-25 219.8 4.7 248 838-1115 24-296 (1431)
432 cd05147 RIO1_euk RIO kinase fa 99.8 3.3E-19 7.2E-24 184.0 11.6 137 842-987 2-166 (190)
433 cd05145 RIO1_like RIO kinase f 99.8 2.5E-18 5.5E-23 178.4 14.1 137 842-988 2-167 (190)
434 KOG4158 BRPK/PTEN-induced prot 99.8 1.1E-18 2.4E-23 184.2 10.8 199 890-1111 274-511 (598)
435 PRK12274 serine/threonine prot 99.8 1.8E-18 3.8E-23 175.2 11.0 185 840-1042 5-208 (218)
436 KOG0617 Ras suppressor protein 99.8 5E-20 1.1E-24 172.5 -2.0 181 527-713 29-213 (264)
437 cd00116 LRR_RI Leucine-rich re 99.8 3.3E-20 7.1E-25 211.1 -4.3 279 415-711 2-319 (319)
438 KOG0603 Ribosomal protein S6 k 99.7 3.1E-19 6.6E-24 201.5 2.7 185 844-1043 1-193 (612)
439 cd00116 LRR_RI Leucine-rich re 99.7 1E-19 2.3E-24 206.9 -2.6 262 333-614 17-318 (319)
440 PF14531 Kinase-like: Kinase-l 99.7 5E-18 1.1E-22 181.6 9.1 235 838-1101 13-288 (288)
441 PRK10345 hypothetical protein; 99.7 6E-17 1.3E-21 168.4 13.9 135 839-983 4-154 (210)
442 KOG1166 Mitotic checkpoint ser 99.7 2.9E-17 6.2E-22 199.2 11.5 196 835-1039 696-901 (974)
443 KOG0617 Ras suppressor protein 99.7 1.2E-18 2.7E-23 163.2 -1.7 165 456-650 30-195 (264)
444 KOG1023 Natriuretic peptide re 99.7 8E-17 1.7E-21 183.1 11.8 216 886-1118 1-228 (484)
445 PRK14879 serine/threonine prot 99.7 1.8E-16 3.9E-21 168.4 13.3 133 843-987 2-143 (211)
446 smart00090 RIO RIO-like kinase 99.7 3.9E-16 8.5E-21 166.8 11.1 139 838-987 29-197 (237)
447 KOG0606 Microtubule-associated 99.6 1.5E-16 3.3E-21 188.1 6.9 210 836-1102 82-304 (1205)
448 cd05144 RIO2_C RIO kinase fami 99.6 1.7E-15 3.6E-20 158.8 12.9 134 838-987 16-174 (198)
449 PLN03150 hypothetical protein; 99.6 6.5E-16 1.4E-20 188.3 10.9 135 25-162 367-509 (623)
450 KOG1033 eIF-2alpha kinase PEK/ 99.6 4.8E-16 1E-20 172.6 7.7 176 907-1107 330-509 (516)
451 TIGR03724 arch_bud32 Kae1-asso 99.6 1.2E-15 2.6E-20 160.4 10.1 129 844-987 1-138 (199)
452 PRK09605 bifunctional UGMP fam 99.6 2.6E-15 5.6E-20 181.5 13.7 137 836-987 332-476 (535)
453 PRK01723 3-deoxy-D-manno-octul 99.5 1.1E-13 2.4E-18 148.2 13.8 135 842-987 36-191 (239)
454 cd05119 RIO RIO kinase family, 99.5 3.5E-14 7.7E-19 147.6 8.7 133 842-987 2-163 (187)
455 PLN03150 hypothetical protein; 99.5 6.2E-14 1.3E-18 171.1 7.7 118 628-745 419-538 (623)
456 cd05120 APH_ChoK_like Aminogly 99.5 3.8E-13 8.3E-18 134.5 12.0 131 841-986 2-137 (155)
457 KOG0590 Checkpoint kinase and 99.5 9.6E-15 2.1E-19 175.1 0.4 250 838-1108 21-284 (601)
458 KOG0532 Leucine-rich repeat (L 99.4 5.3E-15 1.2E-19 163.7 -3.9 182 505-696 73-254 (722)
459 KOG0532 Leucine-rich repeat (L 99.4 1.8E-14 3.9E-19 159.6 -3.9 193 483-685 75-270 (722)
460 TIGR01982 UbiB 2-polyprenylphe 99.3 5.4E-12 1.2E-16 147.2 12.4 140 842-988 122-307 (437)
461 COG4886 Leucine-rich repeat (L 99.3 1.9E-12 4.1E-17 151.6 7.6 198 511-717 97-295 (394)
462 COG4886 Leucine-rich repeat (L 99.3 3E-12 6.4E-17 150.0 8.3 109 553-666 184-292 (394)
463 KOG1909 Ran GTPase-activating 99.2 2.2E-13 4.7E-18 143.4 -6.9 243 88-400 23-283 (382)
464 cd05151 ChoK Choline Kinase (C 99.2 5.8E-11 1.3E-15 121.3 10.6 127 842-986 3-135 (170)
465 PRK04750 ubiB putative ubiquin 99.2 6.9E-11 1.5E-15 139.0 10.4 142 837-988 120-314 (537)
466 KOG1259 Nischarin, modulator o 99.2 9.2E-12 2E-16 127.6 2.1 137 573-715 278-415 (490)
467 KOG1266 Protein kinase [Signal 99.1 7.8E-11 1.7E-15 122.8 8.0 209 882-1112 117-333 (458)
468 KOG1259 Nischarin, modulator o 99.1 1.2E-11 2.6E-16 126.7 1.3 134 551-690 280-414 (490)
469 KOG0531 Protein phosphatase 1, 99.1 9.2E-12 2E-16 145.8 -0.4 244 211-498 70-320 (414)
470 KOG0531 Protein phosphatase 1, 99.1 1.2E-11 2.6E-16 144.8 0.3 242 459-714 72-320 (414)
471 KOG1909 Ran GTPase-activating 99.1 2.2E-12 4.8E-17 135.9 -6.0 197 432-639 89-310 (382)
472 KOG0601 Cyclin-dependent kinas 99.1 1.2E-10 2.7E-15 132.9 7.5 247 837-1108 114-377 (524)
473 cd05146 RIO3_euk RIO kinase fa 99.1 1.1E-09 2.5E-14 111.6 12.7 133 843-987 3-173 (197)
474 PF14580 LRR_9: Leucine-rich r 99.1 1.1E-10 2.4E-15 116.6 4.7 81 316-400 20-101 (175)
475 KOG3207 Beta-tubulin folding c 99.1 2.4E-11 5.2E-16 131.5 -0.3 162 502-664 141-314 (505)
476 PF14580 LRR_9: Leucine-rich r 99.0 1.2E-10 2.7E-15 116.3 4.4 139 322-466 4-147 (175)
477 KOG1243 Protein kinase [Genera 99.0 1.8E-09 3.8E-14 124.3 14.0 165 857-1037 33-199 (690)
478 COG3642 Mn2+-dependent serine/ 99.0 2.9E-09 6.3E-14 104.0 12.9 129 843-986 2-139 (204)
479 PF08263 LRRNT_2: Leucine rich 99.0 4.7E-10 1E-14 84.1 4.2 41 29-69 2-43 (43)
480 KOG4658 Apoptotic ATPase [Sign 99.0 3.9E-10 8.5E-15 140.3 6.0 129 339-470 523-653 (889)
481 KOG3207 Beta-tubulin folding c 99.0 1.1E-10 2.3E-15 126.6 0.5 190 334-546 141-341 (505)
482 KOG4658 Apoptotic ATPase [Sign 98.9 8.8E-10 1.9E-14 137.3 6.2 272 290-569 523-808 (889)
483 KOG3087 Serine/threonine prote 98.9 2.6E-08 5.7E-13 96.6 13.4 141 841-986 11-164 (229)
484 cd05154 ACAD10_11_like Acyl-Co 98.9 8.4E-09 1.8E-13 110.4 10.9 138 843-986 4-205 (223)
485 KOG0606 Microtubule-associated 98.9 1.5E-09 3.2E-14 129.9 4.7 211 836-1052 803-1046(1205)
486 KOG0601 Cyclin-dependent kinas 98.8 3.9E-09 8.5E-14 120.8 6.7 247 835-1113 263-517 (524)
487 PRK15123 lipopolysaccharide co 98.8 6.6E-08 1.4E-12 104.7 14.5 140 843-986 28-193 (268)
488 PF13855 LRR_8: Leucine rich r 98.8 6.7E-09 1.4E-13 85.3 4.6 60 316-375 2-61 (61)
489 PF01163 RIO1: RIO1 family; I 98.8 6.5E-08 1.4E-12 98.6 12.1 123 852-987 1-155 (188)
490 COG0478 RIO-like serine/threon 98.7 5.3E-08 1.1E-12 101.1 9.3 132 839-985 93-249 (304)
491 PF13855 LRR_8: Leucine rich r 98.7 1.4E-08 3E-13 83.4 4.0 61 339-399 1-61 (61)
492 KOG1859 Leucine-rich repeat pr 98.6 5.8E-10 1.3E-14 127.3 -7.3 128 579-713 164-293 (1096)
493 KOG2982 Uncharacterized conser 98.6 2.6E-09 5.7E-14 110.0 -1.9 119 83-201 33-158 (418)
494 KOG4579 Leucine-rich repeat (L 98.6 4.4E-09 9.5E-14 96.2 -2.0 136 580-720 28-167 (177)
495 COG5238 RNA1 Ran GTPase-activa 98.6 1.7E-09 3.7E-14 110.0 -5.3 213 186-448 89-316 (388)
496 COG4248 Uncharacterized protei 98.5 1.5E-06 3.3E-11 94.4 15.3 265 840-1116 14-302 (637)
497 PRK09902 hypothetical protein; 98.5 2.9E-06 6.4E-11 86.7 14.4 137 845-986 26-178 (216)
498 KOG1859 Leucine-rich repeat pr 98.5 2.8E-09 6E-14 121.9 -8.4 127 532-664 165-292 (1096)
499 KOG3741 Poly(A) ribonuclease s 98.4 1.7E-06 3.6E-11 96.8 12.9 171 849-1039 288-474 (655)
500 PF06293 Kdo: Lipopolysacchari 98.4 2.7E-06 5.7E-11 89.4 12.6 107 876-987 55-170 (206)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.6e-112 Score=1104.64 Aligned_cols=912 Identities=34% Similarity=0.574 Sum_probs=642.1
Q ss_pred chhHHHHHHHHHHhCCCCCCCccCCCCCCCCCCCccceeeeCC-CceEEEeeCCcccCcccchhhcccccCcEEEcccCc
Q 001171 28 VLSEIQALTSFKLHLKDPLGALDGWDSSTPSAPCDWRGIVCYN-NRVRELRLPRLQLAGRLTDQLADLHELRKLSLHSNH 106 (1133)
Q Consensus 28 ~~~~~~~l~~~k~~~~~~~~~l~~w~~~~~~~~c~w~gv~c~~-~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~l~~n~ 106 (1133)
.+.|++||++||+++.||.+.+.+|+.. .+||.|.||+|++ ++|++|+|.+++++|.+++.++.+++|+.|+|++|+
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~--~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~ 104 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSS--ADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQ 104 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCC--CCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCc
Confidence 5589999999999999898889999654 3799999999985 688888888888888777777777777777777777
Q ss_pred ccCCCCcccc-CCCCcceEeccCCcccCcCCCccccccchhhhhhcccccCCCccCccCCcceEEEccCCcCCCCCCCCC
Q 001171 107 LNGSIPASLH-QCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISADISPSLRYLDLSSNAFTGEIPGNF 185 (1133)
Q Consensus 107 l~~~~p~~~~-~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~Ls~N~~~~~~p~~~ 185 (1133)
++|.+|..+. .+++|+.|+|++|.++|.+|. .
T Consensus 105 ~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~------------------------~----------------------- 137 (968)
T PLN00113 105 LSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR------------------------G----------------------- 137 (968)
T ss_pred cCCcCChHHhccCCCCCEEECcCCccccccCc------------------------c-----------------------
Confidence 7776766544 666666666666666554442 1
Q ss_pred CCCCcCcEEeccCCcCCCCCcccccCccccceEecccccccCCCCccccCccccceeeccccccCCCCCCcccCcCcccE
Q 001171 186 SSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQV 265 (1133)
Q Consensus 186 ~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 265 (1133)
.+++|++|+|++|.+++.+|..++.+++|++|+|++|.+.+.+|..+.++++|++|++++|++.+.+|..++++++|++
T Consensus 138 -~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 216 (968)
T PLN00113 138 -SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKW 216 (968)
T ss_pred -ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccE
Confidence 1233444444444444444444444444444444444444444444444444444444444444444444555555555
Q ss_pred EEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCccccccEEeccCCcccccCCchhhcccccceee
Q 001171 266 LSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMD 345 (1133)
Q Consensus 266 L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 345 (1133)
|+|++|++++.+ |..+.++++|++|+
T Consensus 217 L~L~~n~l~~~~------------------------------------------------------p~~l~~l~~L~~L~ 242 (968)
T PLN00113 217 IYLGYNNLSGEI------------------------------------------------------PYEIGGLTSLNHLD 242 (968)
T ss_pred EECcCCccCCcC------------------------------------------------------ChhHhcCCCCCEEE
Confidence 555555554322 44556667777777
Q ss_pred ccCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcccccCCCccCCCCCCcEEEccCCcCcc
Q 001171 346 LSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSG 425 (1133)
Q Consensus 346 Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 425 (1133)
|++|.+.+.+|..|+++++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|..+.++++|+.|++++|.+++
T Consensus 243 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 322 (968)
T PLN00113 243 LVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTG 322 (968)
T ss_pred CcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCC
Confidence 77777777777788888888888888888887777777777788888888777777777666666666666666666665
Q ss_pred ccCccccCccccceeecccccccccCChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEEcccCCCccccCCCcCC
Q 001171 426 LIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGS 505 (1133)
Q Consensus 426 ~~p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 505 (1133)
.+|..+..+++|+.|++++|.+.+.+|..+. .+++|+.|++++|++++.+|..+..
T Consensus 323 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~------------------------~~~~L~~L~Ls~n~l~~~~p~~~~~ 378 (968)
T PLN00113 323 KIPVALTSLPRLQVLQLWSNKFSGEIPKNLG------------------------KHNNLTVLDLSTNNLTGEIPEGLCS 378 (968)
T ss_pred cCChhHhcCCCCCEEECcCCCCcCcCChHHh------------------------CCCCCcEEECCCCeeEeeCChhHhC
Confidence 5555555555555555555555544444444 4445555555555555555556666
Q ss_pred cccccEEeccccCCCCCCChhccCCCCCcEeeccCCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccccceee
Q 001171 506 LMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLS 585 (1133)
Q Consensus 506 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 585 (1133)
+++|+.|++++|++.+.+|..+..+++|+.|++++|++++..|..|..++.|+.|++++|.+++.++..+..+++|+.|+
T Consensus 379 ~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 458 (968)
T PLN00113 379 SGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLS 458 (968)
T ss_pred cCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEE
Confidence 66666677777777666777777777777777777777777777777777777777777777777777777788888888
Q ss_pred cccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCchhhhccCCCcEEEeecCCCCc
Q 001171 586 LSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSG 665 (1133)
Q Consensus 586 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 665 (1133)
|++|++.+.+|..+ ..++|+.|++++|++++.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++
T Consensus 459 L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 537 (968)
T PLN00113 459 LARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSG 537 (968)
T ss_pred CcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccc
Confidence 88888887777665 35789999999999998899889999999999999999999999999999999999999999999
Q ss_pred cCCccccCcccccccccccccccccCCccccccccCcccccccccccccCCcccc-CCCCCCcccCcCccccCCCCC---
Q 001171 666 RIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNNLEGEIPKMLS-SRFNDPSIFAMNRELCGKPLD--- 741 (1133)
Q Consensus 666 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~-~~~~~~~~~~~n~~lcg~~~~--- 741 (1133)
.+|..|..+++|+.|||++|+++|.+|..+..+++|+.||+++|+++|.+|.... ..+.. +.+.+|+.+||.+..
T Consensus 538 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~-~~~~~n~~lc~~~~~~~~ 616 (968)
T PLN00113 538 QIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINA-SAVAGNIDLCGGDTTSGL 616 (968)
T ss_pred cCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccCh-hhhcCCccccCCccccCC
Confidence 9999999999999999999999999999999999999999999999999997532 12333 348999999996532
Q ss_pred CCCcchhhcccccchhhHHHHHHHHHHHHHHHhhhhhhhHhHHhhhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCcee
Q 001171 742 RECANVRKRKRKRLIILICVSAAGACLLALCCCGYIYSLLRWRQTLRAWATGEKKPSPSRGSSGAERGRGSGENGGPKLV 821 (1133)
Q Consensus 742 ~~c~~~~~~~~~~l~~~iiv~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1133)
.+|..... ...... ++++++++++++++++ +++.++|+|+..+. ++.....+. ....
T Consensus 617 ~~c~~~~~--~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~--------------~~~~ 673 (968)
T PLN00113 617 PPCKRVRK--TPSWWF-YITCTLGAFLVLALVA-FGFVFIRGRNNLEL-----KRVENEDGT--------------WELQ 673 (968)
T ss_pred CCCccccc--cceeee-ehhHHHHHHHHHHHHH-HHHHHHHhhhcccc-----ccccccccc--------------cccc
Confidence 35643222 111111 2222222222222222 22222222211110 000000000 0000
Q ss_pred ee----cCcccHHHHHHHhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeee
Q 001171 822 MF----NNKITYVETLEATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTV 896 (1133)
Q Consensus 822 ~~----~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 896 (1133)
.+ ...+.+. .....|...++||+|+||.||+|++ .+|+.||||++..... ...+|++++++++|||||+
T Consensus 674 ~~~~~~~~~~~~~---~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~HpnIv~ 747 (968)
T PLN00113 674 FFDSKVSKSITIN---DILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPNIVK 747 (968)
T ss_pred ccccccchhhhHH---HHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCCcce
Confidence 00 1112222 2345678889999999999999987 4789999999864332 2245789999999999999
Q ss_pred EEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceecccCccceeeCC
Q 001171 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH---SLDMVHGDIKPQNVLFDA 973 (1133)
Q Consensus 897 l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH---~~~ivH~Dlkp~NIll~~ 973 (1133)
+++++.+... .++||||+++|+|.++++. ++|..+..++.|||+|++||| +.+|+|||+||+||+++.
T Consensus 748 ~~~~~~~~~~-~~lv~Ey~~~g~L~~~l~~--------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~ 818 (968)
T PLN00113 748 LIGLCRSEKG-AYLIHEYIEGKNLSEVLRN--------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG 818 (968)
T ss_pred EEEEEEcCCC-CEEEEeCCCCCcHHHHHhc--------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC
Confidence 9999987654 5999999999999999963 789999999999999999999 669999999999999999
Q ss_pred CCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccC--ChhhHHH
Q 001171 974 DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFT--QDEDIVK 1051 (1133)
Q Consensus 974 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~--~~~~~~~ 1051 (1133)
++.+++. ||.+.... ......|++.|+|||++.+..++.++|||||||++|||++|+.||... ......+
T Consensus 819 ~~~~~~~-~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~ 890 (968)
T PLN00113 819 KDEPHLR-LSLPGLLC-------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVE 890 (968)
T ss_pred CCceEEE-eccccccc-------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHH
Confidence 9888875 55543221 112336889999999999999999999999999999999999998532 2344566
Q ss_pred HHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCC
Q 001171 1052 WVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVG 1117 (1133)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~ 1117 (1133)
|.+...........+++....... ...++.....+++.+||+.||++||+|+||+++|++....
T Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 891 WARYCYSDCHLDMWIDPSIRGDVS--VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHHhcCccchhheeCccccCCCC--ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 665544444444455554432111 1233444455899999999999999999999999987653
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.7e-60 Score=621.18 Aligned_cols=499 Identities=37% Similarity=0.610 Sum_probs=428.1
Q ss_pred cceEEEccCCcCCCCCCCCCCCCCcCcEEeccCCcCCCCCccccc-CccccceEecccccccCCCCccccCccccceeec
Q 001171 166 SLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVG-QLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSA 244 (1133)
Q Consensus 166 ~l~~L~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l 244 (1133)
.++.|||++|.++|.+|..|..+++|+.|+|++|+++|.+|..+. .+++|++|+|++|++++.+|. ..+++|++|++
T Consensus 70 ~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~L 147 (968)
T PLN00113 70 RVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDL 147 (968)
T ss_pred cEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEEC
Confidence 567788888888888888888888888888888888887887654 788888888888888777664 34556666666
Q ss_pred cccccCCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCccccccEEeccC
Q 001171 245 EDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQN 324 (1133)
Q Consensus 245 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~ 324 (1133)
++|.+++.+|..++.+++|++|+|++|.+.+.+
T Consensus 148 s~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~----------------------------------------------- 180 (968)
T PLN00113 148 SNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKI----------------------------------------------- 180 (968)
T ss_pred cCCcccccCChHHhcCCCCCEEECccCcccccC-----------------------------------------------
Confidence 666666555655666666666666655554433
Q ss_pred CcccccCCchhhcccccceeeccCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcccccCC
Q 001171 325 NRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVP 404 (1133)
Q Consensus 325 n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 404 (1133)
|..+.++++|++|+|++|.+.+.+|..++++++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|
T Consensus 181 -------p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 253 (968)
T PLN00113 181 -------PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIP 253 (968)
T ss_pred -------ChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccC
Confidence 5556666777777777777776777777777777777777777777777777777777777777777777777
Q ss_pred CccCCCCCCcEEEccCCcCccccCccccCccccceeecccccccccCChhhcCCCCCcEEecccCcCCCCCCCCCCCCCC
Q 001171 405 AFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKG 484 (1133)
Q Consensus 405 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 484 (1133)
..++++++|+.|++++|.+++.+|..+.++++|++|++++|.+.+.+|..+.++++|+.|++++|.+++..|..+..+++
T Consensus 254 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 333 (968)
T PLN00113 254 SSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPR 333 (968)
T ss_pred hhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCC
Confidence 77778888888888888887778888888888888888888888888888888999999999999998888888999999
Q ss_pred CcEEEcccCCCccccCCCcCCcccccEEeccccCCCCCCChhccCCCCCcEeeccCCcccccCCCCCCCCccCcEEEccc
Q 001171 485 LLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSD 564 (1133)
Q Consensus 485 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 564 (1133)
|+.|++++|.+++.+|..++.+++|+.|++++|++++.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++
T Consensus 334 L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~ 413 (968)
T PLN00113 334 LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQD 413 (968)
T ss_pred CCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcccccccccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCc
Q 001171 565 NAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIP 644 (1133)
Q Consensus 565 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 644 (1133)
|++++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+. .++|+.|+|++|++++.+|
T Consensus 414 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ls~n~l~~~~~ 492 (968)
T PLN00113 414 NSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVP 492 (968)
T ss_pred CEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-cccceEEECcCCccCCccC
Confidence 999999999999999999999999999999999999999999999999999998887664 5899999999999999999
Q ss_pred hhhhccCCCcEEEeecCCCCccCCccccCcccccccccccccccccCCccccccccCcccccccccccccCCccccC
Q 001171 645 KEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNNLEGEIPKMLSS 721 (1133)
Q Consensus 645 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~ 721 (1133)
..+.++++|+.|+|++|++++.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|||++|+++|.+|..+..
T Consensus 493 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 569 (968)
T PLN00113 493 RKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGN 569 (968)
T ss_pred hhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987543
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=421.46 Aligned_cols=286 Identities=41% Similarity=0.705 Sum_probs=244.3
Q ss_pred cCcccHHHHHHHhcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcC-HHHHHHHHHHHhhccCCCeeeEEEEEe
Q 001171 824 NNKITYVETLEATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVLRGYYA 902 (1133)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~ 902 (1133)
...|++.+...||++|...++||+|+||.||+|...+|+.||||++...... .++|.+|++++.+++|||+|+++|||.
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCL 141 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEe
Confidence 4568999999999999999999999999999999999999999998765554 667999999999999999999999999
Q ss_pred CCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCC---ceecccCccceeeCCCCceEE
Q 001171 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD---MVHGDIKPQNVLFDADFEAHL 979 (1133)
Q Consensus 903 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl 979 (1133)
+.++..++|||||++|+|.++++..... .++|.+|.+||.++|+||+|||... |+||||||+|||+|+++.+||
T Consensus 142 e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 142 EGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred cCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 8754469999999999999999874432 6899999999999999999999854 999999999999999999999
Q ss_pred eccCcccccccCCCCCCCCCCC-CCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccC---ChhhHHHHHHH
Q 001171 980 SEFGLDRLAIATPAEASSSTTP-IGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFT---QDEDIVKWVKK 1055 (1133)
Q Consensus 980 ~Dfg~a~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~---~~~~~~~~~~~ 1055 (1133)
+|||+|+..... ....... .||.+|+|||++..+..+.|+|||||||++.|++||+.|.+.. .......|++.
T Consensus 219 sDFGLa~~~~~~---~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 219 SDFGLAKLGPEG---DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred cCccCcccCCcc---ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 999999654321 1111111 7999999999999999999999999999999999999988743 34458899999
Q ss_pred HhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCC
Q 001171 1056 QLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVG 1117 (1133)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~ 1117 (1133)
....+.+.+++|+.+.. ......++....+.++.+|++.+|.+||+|.||+++|+.....
T Consensus 296 ~~~~~~~~eiiD~~l~~--~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKE--GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHCcchhheeCCCccC--CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 88888999999998763 1111114555566999999999999999999999999776554
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-44 Score=401.75 Aligned_cols=259 Identities=31% Similarity=0.507 Sum_probs=213.7
Q ss_pred CCCcccccccccceeEEEEEECCceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 838 QFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
+....+.||+|+||+||+|.|+....||||++.....+ .++|.+|+.+|.+++|||||+++|+|.+.....++||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 34455679999999999999985555999999765433 458999999999999999999999999876456899999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCC-ceecccCccceeeCCCC-ceEEeccCcccccccCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD-MVHGDIKPQNVLFDADF-EAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~ 992 (1133)
+++|+|.++++.. ....+++..+..++.|||+||.|||+++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 122 ~~~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999999874 2345999999999999999999999999 99999999999999998 99999999997653321
Q ss_pred CCCCCCCCCCCCCCccCccccC--CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 993 AEASSSTTPIGSLGYVSPEAAS--TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||...........+.....+..++..+++.
T Consensus 199 ---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~- 274 (362)
T KOG0192|consen 199 ---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPH- 274 (362)
T ss_pred ---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHH-
Confidence 2233468999999999998 5689999999999999999999999998777655555555444443333322211
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCC
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGP 1118 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~ 1118 (1133)
...++.+||+.||++||++.|++..|+.+....
T Consensus 275 ---------------l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 275 ---------------LSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred ---------------HHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 126777899999999999999999999776533
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=379.23 Aligned_cols=250 Identities=24% Similarity=0.410 Sum_probs=202.3
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccC--CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG--TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
+.+..++||+|..|+||+++++ +++.+|+|.+... ....+++.+|++++++.+||+||.++|.|........++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3456788999999999999886 6899999999432 223578899999999999999999999998765446899999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|.+|||++++...++ +++....+++.+|++||.|||+ ++||||||||+|||++..|.+||||||.++.....
T Consensus 160 MDgGSLd~~~k~~g~-----i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRVGR-----IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-- 232 (364)
T ss_pred cCCCCHHHHHhhcCC-----CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence 999999999987543 8999999999999999999995 89999999999999999999999999999766433
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccC--ChhhHHHHHHHHhhhccccccccCCcC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFT--QDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
...+.+||..|||||.+.+..|+.++||||||++++|+.+|+.||... ...+..+.+...... ..+.+.+.
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~-ppP~lP~~--- 305 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE-PPPRLPEG--- 305 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC-CCCCCCcc---
Confidence 446689999999999999999999999999999999999999999764 122333333332221 11111111
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.-..++. .++..|+++||.+||++.|++++
T Consensus 306 ---~fS~ef~------~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 306 ---EFSPEFR------SFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred ---cCCHHHH------HHHHHHhcCCcccCCCHHHHhcC
Confidence 0111122 56778999999999999999865
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-44 Score=379.78 Aligned_cols=251 Identities=24% Similarity=0.394 Sum_probs=204.5
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc--------CHHHHHHHHHHHhhccCCCeeeEEEEEeCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI--------DENTFRKEAEALGKVKHRNLTVLRGYYAGPP 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 905 (1133)
..+.|.+.+.+|+|+||.|-+|.. ++|+.||||.+.+... ....+++|+++|++++|||||+++++|+.++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 345688899999999999999955 5799999999964322 1234679999999999999999999999875
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC---CceEEecc
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD---FEAHLSEF 982 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Df 982 (1133)
.. |+||||++||+|.+.+-.++. +.+..-..+++|++.|+.|||++||+||||||+|||+..+ ..+||+||
T Consensus 250 s~-YmVlE~v~GGeLfd~vv~nk~-----l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SS-YMVLEYVEGGELFDKVVANKY-----LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ce-EEEEEEecCccHHHHHHhccc-----cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEeccc
Confidence 54 999999999999999987654 5566667899999999999999999999999999999765 78999999
Q ss_pred CcccccccCCCCCCCCCCCCCCCCccCccccCCCC---CCCCCchhHHHHHHHHHHhCCCCCccCChhh-HHHHHHHHhh
Q 001171 983 GLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ---PTKEADVYSFGIVLLEILTGRKPVMFTQDED-IVKWVKKQLQ 1058 (1133)
Q Consensus 983 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~-~~~~~~~~~~ 1058 (1133)
|+|+... ......+.+||+.|.|||++.++. +..++|+||+||++|-+++|.+||.....+. +.+.+.+
T Consensus 324 GlAK~~g----~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~--- 396 (475)
T KOG0615|consen 324 GLAKVSG----EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK--- 396 (475)
T ss_pred chhhccc----cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc---
Confidence 9998653 345567789999999999997654 3458899999999999999999997544333 4444433
Q ss_pred hccccccccCCcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHH
Q 001171 1059 RGQISELLEPGLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+ .+......|.++...+ ++|.+|+..||++||+++|++++
T Consensus 397 -G-----------~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 397 -G-----------RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred -C-----------cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 2 1223344566666555 99999999999999999998853
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-43 Score=391.84 Aligned_cols=247 Identities=22% Similarity=0.409 Sum_probs=213.3
Q ss_pred cCCCcccccccccceeEEEEEE-CCceEEEEEEccc----CCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRD----GTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~----~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
.+|...+.||+|+|+.||+++. ..|+.||+|++.+ .....+.+.+|++|.++++|||||+++++|++..+. |+|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nV-Yiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNV-YIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCce-EEE
Confidence 5799999999999999999987 7899999999976 344567889999999999999999999999988655 999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
.|+|+.++|..++++. ..+++.+++.+.+||+.|+.|||+++|+|||||-.|+|++++.++||+|||+|..+...
T Consensus 97 LELC~~~sL~el~Krr-----k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRR-----KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EEecCCccHHHHHHhc-----CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999999853 34899999999999999999999999999999999999999999999999999766432
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
..+..+.+|||.|.|||++....++..+||||+|||||-|+.|++||....-.+++..++.. ++.-|...
T Consensus 172 ---~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~-------~Y~~P~~l 241 (592)
T KOG0575|consen 172 ---GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN-------EYSMPSHL 241 (592)
T ss_pred ---ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc-------Cccccccc
Confidence 24556789999999999999999999999999999999999999999877777777766553 22222211
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ..+.++|.+++++||.+|||+++|+.+
T Consensus 242 s-----------~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 242 S-----------AEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred C-----------HHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1 122389999999999999999999854
No 8
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-43 Score=389.48 Aligned_cols=260 Identities=25% Similarity=0.461 Sum_probs=220.8
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.+.++..+.||+|.||+||.|.++....||+|.++.+....++|.+|+++|++++|++||+++|+|..++ ..+||||||
T Consensus 205 r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~-piyIVtE~m 283 (468)
T KOG0197|consen 205 REELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE-PIYIVTEYM 283 (468)
T ss_pred HHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCC-ceEEEEEec
Confidence 3345678899999999999999998889999999988888899999999999999999999999998865 459999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
+.|+|.++++.. .+..+...+...++.|||+||+||+++++|||||.++||||+++..+||+|||+||...+ +..
T Consensus 284 ~~GsLl~yLr~~---~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d--~~Y 358 (468)
T KOG0197|consen 284 PKGSLLDYLRTR---EGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGD--DEY 358 (468)
T ss_pred ccCcHHHHhhhc---CCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCC--Cce
Confidence 999999999972 235588999999999999999999999999999999999999999999999999994322 222
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......-...|+|||.+..+.++.|+|||||||+||||+| |+.||......++.+.+.++.+-.... .+.
T Consensus 359 ~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~-~CP------- 430 (468)
T KOG0197|consen 359 TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPE-GCP------- 430 (468)
T ss_pred eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCC-CCC-------
Confidence 23333345568999999999999999999999999999999 999999999888888887765543211 111
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCC
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGP 1118 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~ 1118 (1133)
.+- -+++..||+.+|++|||++.+...|+.+....
T Consensus 431 -----~~v----Y~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 431 -----DEV----YELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred -----HHH----HHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 111 16888999999999999999999999876543
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=368.74 Aligned_cols=211 Identities=24% Similarity=0.436 Sum_probs=185.9
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
..+|...+.||+|+||+||+|+++ ++..||||.+.+.... .+.+..|+++++.++|||||.+++++..++ ..|+|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~-~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD-FIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC-eEEEE
Confidence 457888899999999999999886 5899999999765433 355678999999999999999999998874 55999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC------CceEEeccCcc
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD------FEAHLSEFGLD 985 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~------~~~kl~Dfg~a 985 (1133)
||||.||+|.+|+++.+ .+++.....++.|+|.|+++||+++||||||||+|||++.. ..+||+|||+|
T Consensus 88 MEyC~gGDLs~yi~~~~-----~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG-----RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EEeCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999999999865 38899999999999999999999999999999999999765 45799999999
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHH
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQ 1056 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~ 1056 (1133)
|.... .....+.+|++-|||||++...+|+.|+|+||+|+|+|+|++|+.||......++..++++.
T Consensus 163 R~L~~----~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~ 229 (429)
T KOG0595|consen 163 RFLQP----GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG 229 (429)
T ss_pred hhCCc----hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc
Confidence 87642 23445678999999999999999999999999999999999999999988888877766554
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-44 Score=356.81 Aligned_cols=257 Identities=22% Similarity=0.387 Sum_probs=209.2
Q ss_pred hcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEE-EEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRG-YYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~-~~~~~~~~~~l 910 (1133)
..+|.+.++||+|+||+||++.. .+|..||.|.+.-+..+ .++...|+.++++++|||||++++ -+.+..+..++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 34688899999999999999955 57999999999865554 356788999999999999999998 45555566789
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc--CC--ceecccCccceeeCCCCceEEeccCccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS--LD--MVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~--~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
|||||..|+|.+.+++.+.+ .+.+++..+|+++.|++.||.++|+ .. |+||||||.||+++.+|.+|++|||+++
T Consensus 98 vmE~c~~GDLsqmIk~~K~q-kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQ-KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHhhcccCHHHHHHHHHhc-cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 99999999999999987654 4679999999999999999999998 45 9999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 987 LAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 987 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
+.... .......+|||.||+||.+.+..|+.++||||+||++|||+.-++||.+.+-.++...+.+ +.++...
T Consensus 177 ~l~s~---~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~q----gd~~~~p 249 (375)
T KOG0591|consen 177 FLSSK---TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQ----GDYPPLP 249 (375)
T ss_pred Hhcch---hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHc----CCCCCCc
Confidence 76432 2234567899999999999999999999999999999999999999987654444444333 3322222
Q ss_pred cCCcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1067 EPGLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
+ +-+...+ .+|..|+..||+.||+...++..+..
T Consensus 250 ~-------------~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 250 D-------------EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred H-------------HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1 2223333 68889999999999996555555543
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-42 Score=364.48 Aligned_cols=241 Identities=24% Similarity=0.361 Sum_probs=201.9
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.++|++.++||+|+||+||.++.+ +++.+|+|++++... +.+...+|..++.+++||.||.++..|++.+ ..|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~-kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE-KLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC-eEEE
Confidence 457999999999999999999765 589999999976543 2456788999999999999999999888764 4599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
|+||+.||.|..++++.+. +++..+..++..|+.||.|||++|||||||||+|||+|.+|+++++|||+++....
T Consensus 103 Vld~~~GGeLf~hL~~eg~-----F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR-----FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEeccCCccHHHHHHhcCC-----cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 9999999999999998654 78888899999999999999999999999999999999999999999999975432
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
. .....+.+||+.|||||++.+..|+.++|.||+|+++|||++|.+||...+...+.+.+.+.. ....+..+++.
T Consensus 178 ~---~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~~~p~~ls~~- 252 (357)
T KOG0598|consen 178 D---GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LPLPPGYLSEE- 252 (357)
T ss_pred C---CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CCCCCccCCHH-
Confidence 2 234455799999999999999999999999999999999999999998887777766665532 01111111111
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCC
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRP 1102 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP 1102 (1133)
+.+++.+.+..||++|.
T Consensus 253 ---------------ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 253 ---------------ARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ---------------HHHHHHHHhccCHHHhc
Confidence 12688889999999995
No 12
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.3e-46 Score=390.47 Aligned_cols=496 Identities=30% Similarity=0.423 Sum_probs=311.6
Q ss_pred hhhcccccCcEEEcccCcccCCCCccccCCCCcceEeccCCcccCcCCCccccccchhhhhhcccccCCCccCccCCcce
Q 001171 89 DQLADLHELRKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISADISPSLR 168 (1133)
Q Consensus 89 ~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~ 168 (1133)
..+|.-.-|++|++++|.+. .+...+.++..|++|++++|+++ .+|.+++.+.+++.|++++|.++
T Consensus 39 e~wW~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls------------ 104 (565)
T KOG0472|consen 39 ENWWEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS------------ 104 (565)
T ss_pred hhhhhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh------------
Confidence 34667778899999999998 55557899999999999999999 89999999999999999999887
Q ss_pred EEEccCCcCCCCCCCCCCCCCcCcEEeccCCcCCCCCcccccCccccceEecccccccCCCCccccCccccceeeccccc
Q 001171 169 YLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNV 248 (1133)
Q Consensus 169 ~L~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~ 248 (1133)
.+|+..+++.+|++|+.++|.+. ++|++++.+..|+.|+..+|+++ ..|..+.++.+|..|++.+|+
T Consensus 105 -----------~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~ 171 (565)
T KOG0472|consen 105 -----------ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNK 171 (565)
T ss_pred -----------hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccc
Confidence 56777777778888888888887 57777888888888888888887 677777777888888888888
Q ss_pred cCCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCccccccEEeccCCccc
Q 001171 249 LKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIR 328 (1133)
Q Consensus 249 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~ 328 (1133)
++...|..+. ++.|++||+-.|.++. +|..+ + .+..|+.|||..|+|.
T Consensus 172 l~~l~~~~i~-m~~L~~ld~~~N~L~t-lP~~l-----g-------------------------~l~~L~~LyL~~Nki~ 219 (565)
T KOG0472|consen 172 LKALPENHIA-MKRLKHLDCNSNLLET-LPPEL-----G-------------------------GLESLELLYLRRNKIR 219 (565)
T ss_pred hhhCCHHHHH-HHHHHhcccchhhhhc-CChhh-----c-------------------------chhhhHHHHhhhcccc
Confidence 8766655555 7777777777777753 33333 3 3444555666666666
Q ss_pred ccCCchhhcccccceeeccCceeecccCcccC-CCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcccccCCCcc
Q 001171 329 AVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVG-SLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFL 407 (1133)
Q Consensus 329 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 407 (1133)
.+ | .|..|..|++|+++.|+|+ .+|.... ++++|.+|||+.|+++ ..|+.+..+++|++||+|+|.|+ ..|..+
T Consensus 220 ~l-P-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sL 294 (565)
T KOG0472|consen 220 FL-P-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSL 294 (565)
T ss_pred cC-C-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCccc
Confidence 65 4 6888999999999999998 6676554 8999999999999998 56888888888999999988888 456666
Q ss_pred CCCCCCcEEEccCCcCccccCccccCcc--ccceeecccccccccCChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCC
Q 001171 408 GGIRGLKIVSLGRNMFSGLIPLSFGNLS--QLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGL 485 (1133)
Q Consensus 408 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 485 (1133)
+++ .|+.|-+.+|.+..+-.+.+..-+ -|++|.= .+.. -.++.. .=+...
T Consensus 295 gnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs---~~~~-------------------dglS~s---e~~~e~-- 346 (565)
T KOG0472|consen 295 GNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRS---KIKD-------------------DGLSQS---EGGTET-- 346 (565)
T ss_pred ccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHH---hhcc-------------------CCCCCC---cccccc--
Confidence 666 666666666666532111111100 1222110 0000 000000 000000
Q ss_pred cEEEcccCCCccccCCCcCCcccccEEeccccCCCCCCChhccCCCC---CcEeeccCCcccccCCCCCCCCccCcEE-E
Q 001171 486 LVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPS---LQVVSLEENNLSGDVPEGFSSLVGLQYL-N 561 (1133)
Q Consensus 486 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~---L~~L~L~~N~l~~~~~~~~~~l~~L~~L-~ 561 (1133)
.-+. .. ........+.+.+.|+++.-+++ .+|.+.+.-.. ....++++|++. ++|..+..++.+.+. +
T Consensus 347 -~~t~----~~-~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~ 418 (565)
T KOG0472|consen 347 -AMTL----PS-ESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLV 418 (565)
T ss_pred -cCCC----CC-Ccccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHH
Confidence 0000 00 11112334556778888888877 66776665444 566777777766 455555544443332 2
Q ss_pred cccccccCCCCcccccccccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccC
Q 001171 562 LSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSG 641 (1133)
Q Consensus 562 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 641 (1133)
+++|.+ +.+|..+..+++|+.|+|++|-+. .+|.+++.+..|+.|++++|+|. .+|..+-.+..|+.+-.++|++..
T Consensus 419 lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~ 495 (565)
T KOG0472|consen 419 LSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGS 495 (565)
T ss_pred hhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccc
Confidence 233333 345555555555555555555554 44555555555555555555554 345444444444444444455543
Q ss_pred cCchhhhccCCCcEEEeecCCCCccCCccccCccccccccccccccc
Q 001171 642 EIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLS 688 (1133)
Q Consensus 642 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 688 (1133)
..|..+.+|.+|..|||.+|.+. .+|+.+++|++|++|+|++|++.
T Consensus 496 vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 496 VDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 33333455555555555555554 34444555555555555555544
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=7.6e-42 Score=346.18 Aligned_cols=264 Identities=22% Similarity=0.338 Sum_probs=205.8
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
++|+...++|+|+||+||+++++ +|+.||||++...+.+ .+-..+|++++++++|||+|.++++|..... .++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrk-lhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRK-LHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcce-eEEEe
Confidence 46888889999999999999887 5999999999765543 3556899999999999999999999987644 58999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|||+. ++.+-+.+... -.+.....++++|+++|+.|+|+++++||||||+|||++.+|.+|+||||+|+.....
T Consensus 81 E~~dh-TvL~eLe~~p~----G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p- 154 (396)
T KOG0593|consen 81 EYCDH-TVLHELERYPN----GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP- 154 (396)
T ss_pred eecch-HHHHHHHhccC----CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC-
Confidence 99965 45555555432 3788899999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc----------
Q 001171 993 AEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ---------- 1061 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---------- 1061 (1133)
....+.++.|.+|+|||.+.+ .+|++.+||||+||++.||++|++-|.+.++-+..-.+.+.+..--
T Consensus 155 --gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 155 --GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred --cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 233456789999999999977 7899999999999999999999999988777666655555433211
Q ss_pred --ccccccCCcCCCCCCChhHHHHH-HhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1062 --ISELLEPGLLELDPESSEWEEFL-LGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1062 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
+..+--|......+-...+.... ..++++.+|++.||.+|++-+|++.
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111111111111111222222 2349999999999999999999874
No 14
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.3e-44 Score=378.47 Aligned_cols=478 Identities=29% Similarity=0.415 Sum_probs=358.7
Q ss_pred CCCcCcEEeccCCcCCCCCcccccCccccceEecccccccCCCCccccCccccceeeccccccCCCCCCcccCcCcccEE
Q 001171 187 SKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVL 266 (1133)
Q Consensus 187 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 266 (1133)
.-..|++|++++|.+.. +...+.++..|..|++.+|+++ ..|.+++.+..++.|++++|+++ .+|.+++.+.+|..|
T Consensus 43 ~qv~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l 119 (565)
T KOG0472|consen 43 EQVDLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKL 119 (565)
T ss_pred hhcchhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhh
Confidence 33445555555555552 3333555555666666666655 55555555556666666666655 345555566666666
Q ss_pred EcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCccccccEEeccCCcccccCCchhhcccccceeec
Q 001171 267 SLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDL 346 (1133)
Q Consensus 267 ~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 346 (1133)
++++|++....+ ++ +.+ ..++.|+..+|+|+++ |+.+.++.+|..|++
T Consensus 120 ~~s~n~~~el~~-~i-----~~~-------------------------~~l~dl~~~~N~i~sl-p~~~~~~~~l~~l~~ 167 (565)
T KOG0472|consen 120 DCSSNELKELPD-SI-----GRL-------------------------LDLEDLDATNNQISSL-PEDMVNLSKLSKLDL 167 (565)
T ss_pred hccccceeecCc-hH-----HHH-------------------------hhhhhhhccccccccC-chHHHHHHHHHHhhc
Confidence 666666653322 22 222 2244445555555555 777888999999999
Q ss_pred cCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcccccCCCccCCCCCCcEEEccCCcCccc
Q 001171 347 SGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGL 426 (1133)
Q Consensus 347 s~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 426 (1133)
.+|++....|..+. ++.|++||.-.|.++ .+|..++.+.+|+.|||..|.|. .+| .|.+++.|++++++.|.|...
T Consensus 168 ~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~l 243 (565)
T KOG0472|consen 168 EGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEML 243 (565)
T ss_pred cccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhh
Confidence 99999955555554 999999999999997 46888999999999999999998 566 889999999999999999955
Q ss_pred cCccccCccccceeecccccccccCChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEEcccCCCccccCCCcCCc
Q 001171 427 IPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSL 506 (1133)
Q Consensus 427 ~p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 506 (1133)
..+...+++++..|||++|+++ ..|+.++-+++|..||+|+|.++ ..|.+++++ .|+.|-+.+|.+... ...+-+.
T Consensus 244 pae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTi-Rr~ii~~ 319 (565)
T KOG0472|consen 244 PAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTI-RREIISK 319 (565)
T ss_pred HHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHH-HHHHHcc
Confidence 4455559999999999999999 78999999999999999999998 678899999 999999999988632 1111111
Q ss_pred c---cccEEe-------ccccCCC----CC----CChhccCCCCCcEeeccCCcccccCCCCCCCC--ccCcEEEccccc
Q 001171 507 M---RLTTLD-------LSNQNLS----GE----LPIELFGLPSLQVVSLEENNLSGDVPEGFSSL--VGLQYLNLSDNA 566 (1133)
Q Consensus 507 ~---~L~~L~-------Ls~N~l~----~~----~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~ 566 (1133)
. -|++|. ++.-.=. .. .......+.+.+.|++++-+++..+.+.|..- .-.+..+++.|+
T Consensus 320 gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNq 399 (565)
T KOG0472|consen 320 GTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQ 399 (565)
T ss_pred cHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccch
Confidence 1 122221 1111100 01 11122345678899999999985444444332 238899999999
Q ss_pred ccCCCCcccccccccc-eeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCch
Q 001171 567 FTGDIPATYGFLRSLV-FLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPK 645 (1133)
Q Consensus 567 l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 645 (1133)
+. .+|..+..+..+. .+.+++|.++ .+|..++.+++|..|+|++|-+. .+|.+++.+..|+.||+++|+|. .+|.
T Consensus 400 L~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~ 475 (565)
T KOG0472|consen 400 LC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPE 475 (565)
T ss_pred Hh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchH
Confidence 98 7888888777654 5566666666 88999999999999999999988 59999999999999999999998 8999
Q ss_pred hhhccCCCcEEEeecCCCCccCCccccCcccccccccccccccccCCccccccccCccccccccccc
Q 001171 646 EISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNNLE 712 (1133)
Q Consensus 646 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 712 (1133)
.+..+..|+.+-.++|++....|..+.+|.+|.+|||.+|.+. .+|+.++++++|++|++++|++.
T Consensus 476 ~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 476 CLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 9999999999999999999777777999999999999999998 89999999999999999999998
No 15
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-42 Score=375.22 Aligned_cols=389 Identities=23% Similarity=0.257 Sum_probs=196.1
Q ss_pred ccCccCCcceEEEccCCcCCCCCCCCCCC--CCcCcEEeccCCcCCCCCcccccCccccceEecccccccCCCCccccCc
Q 001171 159 ISADISPSLRYLDLSSNAFTGEIPGNFSS--KSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNC 236 (1133)
Q Consensus 159 ~~~~~~~~l~~L~Ls~N~~~~~~p~~~~~--l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 236 (1133)
.|+..+..-+.||.+++.+..+-...+.. .+.-+.||+|+|+++.+-+.+|.++++|+++++..|.++ .||...+..
T Consensus 46 cpa~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~s 124 (873)
T KOG4194|consen 46 CPATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHES 124 (873)
T ss_pred CCCcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccc
Confidence 34444445556666666664321111111 123345777777777666666777777777777777776 666665555
Q ss_pred cccceeeccccccCCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCcccc
Q 001171 237 SSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSV 316 (1133)
Q Consensus 237 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~ 316 (1133)
.+|+.|+|.+|.|+.+-.+++..++.|+.||||.|.|+. +|..- |..=.++++|+|++|.|+.. ....|..+++
T Consensus 125 ghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~-i~~~s----fp~~~ni~~L~La~N~It~l-~~~~F~~lns 198 (873)
T KOG4194|consen 125 GHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISE-IPKPS----FPAKVNIKKLNLASNRITTL-ETGHFDSLNS 198 (873)
T ss_pred cceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhc-ccCCC----CCCCCCceEEeecccccccc-ccccccccch
Confidence 667777777777776666667777777777777777763 22211 11122333444444443332 1233344445
Q ss_pred ccEEeccCCcccccCCchhhcccccceeeccCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEccC
Q 001171 317 LEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEG 396 (1133)
Q Consensus 317 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 396 (1133)
|.+|.|++|+|+.+++..|.++++|+.|||..|+|.-.---.|.+|++|+.|.|..|.+..+-...|-.|.++++|+|+.
T Consensus 199 L~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~ 278 (873)
T KOG4194|consen 199 LLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLET 278 (873)
T ss_pred heeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeeccc
Confidence 55555555555555555555555555555555555422233455555555555555555554445555555555555555
Q ss_pred CcccccCCCccCCCCCCcEEEccCCcCccccCccccCccccceeecccccccccCChhhcCCCCCcEEecccCcCCCCCC
Q 001171 397 NRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVP 476 (1133)
Q Consensus 397 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~ 476 (1133)
|+++..-..++-+++.|+.|+|++|.|..+.+++..-+++|++|+|++|+|+...++.|..++.|++|+|++|.++..-.
T Consensus 279 N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e 358 (873)
T KOG4194|consen 279 NRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAE 358 (873)
T ss_pred chhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHh
Confidence 55554444444455555555555555544444444444444455555444444444444444444444444444443333
Q ss_pred CCCCCCCCCcEEEcccCCCccccC---CCcCCcccccEEeccccCCCCCCChhccCCCCCcEeeccCCcccccCCCCCCC
Q 001171 477 YDVGNLKGLLVLNLSASGFSGKIP---GSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSS 553 (1133)
Q Consensus 477 ~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 553 (1133)
..|..+++|+.|||++|.++..+. ..|..+++|+.|++.+|++..+...+|.+++.|++|+|.+|.|..+-|.+|..
T Consensus 359 ~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~ 438 (873)
T KOG4194|consen 359 GAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEP 438 (873)
T ss_pred hHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeeccccccc
Confidence 444444444444444444443322 12333344444444444443333333334444444444444443333333333
Q ss_pred C
Q 001171 554 L 554 (1133)
Q Consensus 554 l 554 (1133)
+
T Consensus 439 m 439 (873)
T KOG4194|consen 439 M 439 (873)
T ss_pred c
Confidence 3
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-41 Score=361.65 Aligned_cols=266 Identities=19% Similarity=0.292 Sum_probs=212.6
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcCHHH--HHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDENT--FRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~--~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~l 910 (1133)
..++|.+.++||.|+||.||+|+. ..|+.||||++++.-...++ =.||++.+++++ |||||++.+++.+.+...++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 456899999999999999999965 46899999999865544433 358999999998 99999999999887667799
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||| ..+|+++++.. +..+++..++.|++||++||+|+|++|+.|||+||+|||+.....+||+|||+||.+..
T Consensus 88 VfE~M-d~NLYqLmK~R----~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 88 VFEFM-DCNLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eHHhh-hhhHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999 67999999874 35699999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCCCCccCccccC-CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC-
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAAS-TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP- 1068 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1068 (1133)
. ...+.++-|.+|+|||++. .+.|+.+.|+||+|||++|+.+-++-|.+.++.+....+.+.+..+........
T Consensus 163 k----pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 163 K----PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred C----CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 2 3345678899999999975 566899999999999999999999999887777666666665544332222110
Q ss_pred --------CcCCCCCCChhHH-----HHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1069 --------GLLELDPESSEWE-----EFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1069 --------~~~~~~~~~~~~~-----~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.+....+ .... .-..+++++.+|+..||.+|||+.|.+++=
T Consensus 239 ~La~~mnf~~P~~~~--~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKP--SPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHHHhccCCCcCCC--CChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 0000000 0011 112334889999999999999999999753
No 17
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-41 Score=379.36 Aligned_cols=279 Identities=24% Similarity=0.427 Sum_probs=229.2
Q ss_pred eeecCcccHHHHHHHhc---------CCCcccccccccceeEEEEEECC----ceEEEEEEcccCCcC--HHHHHHHHHH
Q 001171 821 VMFNNKITYVETLEATR---------QFDEENVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEA 885 (1133)
Q Consensus 821 ~~~~~~~~~~~~~~~~~---------~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~--~~~~~~E~~~ 885 (1133)
..+.++.+|++...|.. ...+.++||.|.||.||+|+++- ...||||.++.+..+ ..+|..|+.|
T Consensus 604 k~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsI 683 (996)
T KOG0196|consen 604 KTYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASI 683 (996)
T ss_pred eeecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhh
Confidence 34555666665544443 34568999999999999998752 467999999876554 4689999999
Q ss_pred HhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccC
Q 001171 886 LGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIK 965 (1133)
Q Consensus 886 l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlk 965 (1133)
|.+.+||||+++.|++...... ++|+|||++|+|+.+|+... ..+.+.+..-+.++||.||.||.++++|||||.
T Consensus 684 MGQFdHPNIIrLEGVVTks~Pv-MIiTEyMENGsLDsFLR~~D----GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLA 758 (996)
T KOG0196|consen 684 MGQFDHPNIIRLEGVVTKSKPV-MIITEYMENGSLDSFLRQND----GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLA 758 (996)
T ss_pred cccCCCCcEEEEEEEEecCcee-EEEhhhhhCCcHHHHHhhcC----CceEeehHHHHHHHHHHHhHHHhhcCchhhhhh
Confidence 9999999999999999877554 89999999999999998754 338999999999999999999999999999999
Q ss_pred ccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccC
Q 001171 966 PQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFT 1044 (1133)
Q Consensus 966 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~ 1044 (1133)
++|||++.+..+||+|||++|...+............-..+|.|||.+..++++.++||||||++|||.++ |..||...
T Consensus 759 ARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm 838 (996)
T KOG0196|consen 759 ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 838 (996)
T ss_pred hhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc
Confidence 99999999999999999999976554433333333344579999999999999999999999999999998 99999999
Q ss_pred ChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCCC
Q 001171 1045 QDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDMP 1121 (1133)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~~ 1121 (1133)
+.+++...+.+.++-+. +.+... ..-+++..||++|-.+||.+.||+..|+++-..|+-=
T Consensus 839 SNQdVIkaIe~gyRLPp-------------PmDCP~----aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SL 898 (996)
T KOG0196|consen 839 SNQDVIKAIEQGYRLPP-------------PMDCPA----ALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSL 898 (996)
T ss_pred chHHHHHHHHhccCCCC-------------CCCCcH----HHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhh
Confidence 99998888877655432 121111 1127888999999999999999999999887766543
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-40 Score=360.46 Aligned_cols=252 Identities=22% Similarity=0.368 Sum_probs=209.5
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCC----cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGT----IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 908 (1133)
...+|.+++.||+|+|++||+|+. ..++.||||++.+.. ...+.+.+|-++|.+| .||.|++++..|.+.. ..
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~-sL 149 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE-SL 149 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc-ce
Confidence 345899999999999999999965 468999999985432 2345678899999999 8999999999998764 45
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
|+|+||+++|+|.+++++.+. +++...+.++.+|+.|++|||++|||||||||+|||+|+|++++|+|||.|+..
T Consensus 150 YFvLe~A~nGdll~~i~K~Gs-----fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYGS-----FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEEEecCCCcHHHHHHHhCc-----chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence 999999999999999999765 888899999999999999999999999999999999999999999999999876
Q ss_pred ccCCCC----------CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhh
Q 001171 989 IATPAE----------ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQ 1058 (1133)
Q Consensus 989 ~~~~~~----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 1058 (1133)
.+.... ......++||..|.+||++.....++.+|+|+||||+|+|+.|++||.+.++--+.+.+.+.
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l-- 302 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL-- 302 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh--
Confidence 543221 11124579999999999999999999999999999999999999999877766666665543
Q ss_pred hccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1059 RGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
...+.+++. + .+.+++.+.+..||.+|++..||.++
T Consensus 303 ----~y~fp~~fp----------~--~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 303 ----DYEFPEGFP----------E--DARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ----cccCCCCCC----------H--HHHHHHHHHHccCccccccHHHHhhC
Confidence 111222221 1 12278999999999999999999865
No 19
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7e-41 Score=387.17 Aligned_cols=266 Identities=25% Similarity=0.413 Sum_probs=218.1
Q ss_pred hcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 907 (1133)
+.+....+.||+|+||+||+|+.. +.+.||||.+++.... .++|++|++++..++|||||+++|+|..++.
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P- 563 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP- 563 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe-
Confidence 445667788999999999999653 3578999999876544 5789999999999999999999999998755
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCC---------CCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceE
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGH---------VLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~---------~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 978 (1133)
.++|+|||..|||.++|......... .++..+.+.||.|||.||+||.++.+|||||.++|+||.++..||
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEE
Confidence 49999999999999999876533222 278889999999999999999999999999999999999999999
Q ss_pred EeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHh
Q 001171 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQL 1057 (1133)
Q Consensus 979 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~ 1057 (1133)
|+|||++|.....+... ......-..+|||||.+..++|+.++|||||||+|||+++ |+.||.+...+++.+.++++.
T Consensus 644 IsDfGLsRdiYssDYYk-~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~ 722 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYK-VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQ 722 (774)
T ss_pred ecccccchhhhhhhhhc-ccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCC
Confidence 99999998654432211 1113345679999999999999999999999999999999 999999988888887776642
Q ss_pred hhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCC
Q 001171 1058 QRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDM 1120 (1133)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~ 1120 (1133)
- -..++.+...+ .+++..||+..|.+||+++||-..|+........
T Consensus 723 l-L~~Pe~CP~~v----------------Y~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 723 L-LSCPENCPTEV----------------YSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred c-ccCCCCCCHHH----------------HHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 2 12222222221 2788999999999999999999999987665443
No 20
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=366.48 Aligned_cols=276 Identities=22% Similarity=0.370 Sum_probs=213.2
Q ss_pred HHHHHhcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCc
Q 001171 831 ETLEATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 831 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 907 (1133)
++....+++.+.+.||+|+||+||+|+|. -.||||++...... .++|+.|+.++++-+|.||+-+.|||..++ .
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~-~ 462 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP-L 462 (678)
T ss_pred ccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc-e
Confidence 34445556778899999999999999986 35899999765444 468999999999999999999999998764 3
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.+|+.+|+|.+|+.+++... ..++......||+|||+||.|||.++|||||||..||++++++.|||+|||++..
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred -eeeehhccCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceee
Confidence 89999999999999998754 3488999999999999999999999999999999999999999999999999853
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCCC---CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAASTG---QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
...- ..........|..-|||||++... .|++++||||||+|+|||++|..||.....+.+...+-++....+
T Consensus 538 k~~w-~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd--- 613 (678)
T KOG0193|consen 538 KTRW-SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD--- 613 (678)
T ss_pred eeee-ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc---
Confidence 2221 222334455688899999998543 589999999999999999999999984444443333222211111
Q ss_pred cccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCCCCCCCCCCCC
Q 001171 1065 LLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDMPSSADPTSLP 1130 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~~~~~~~~~~~ 1130 (1133)
... ........ ..+++..||..++++||.+.+|+..|+.+... .|+..++.+.|
T Consensus 614 -----~s~---~~s~~pk~--mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~--~pki~RS~S~P 667 (678)
T KOG0193|consen 614 -----LSK---IRSNCPKA--MKRLLSDCWKFDREERPLFPQLLSKLEELLPS--LPKINRSASEP 667 (678)
T ss_pred -----chh---hhccCHHH--HHHHHHHHHhcCcccCccHHHHHHHHHHhhhc--ccccccCcCcc
Confidence 110 01111111 12678889999999999999999999987774 55555555554
No 21
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=356.10 Aligned_cols=261 Identities=23% Similarity=0.406 Sum_probs=202.3
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCC-cEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPD-VRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-~~~lV~e 913 (1133)
.+|...+.||+|+||.||.+... +|+..|||.+..... ..+.+.+|+++|++++|||||+.+|....... ..++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35778899999999999999775 499999999865421 14668999999999999999999998655444 5689999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC-CCceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA-DFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|+++|+|.+++.+.+. .+++..+..+..||++||+|||++|||||||||+|||++. ++.+||+|||.++......
T Consensus 97 y~~~GsL~~~~~~~g~----~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG----KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999998653 3899999999999999999999999999999999999999 7999999999987654312
Q ss_pred CCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
..........||+.|||||++..+ ...+++||||+||++.||+||+.||... .+...++.........+++.+ .+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~~~P~ip~-~l- 248 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGREDSLPEIPD-SL- 248 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccCCCCCCCc-cc-
Confidence 222334457899999999999853 3446999999999999999999999652 222222223222222221111 11
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
.. .+.+++.+|+..||++|||+.|++++---...
T Consensus 249 -----s~------~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 249 -----SD------EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred -----CH------HHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 01 11267888999999999999999987654443
No 22
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=369.63 Aligned_cols=403 Identities=25% Similarity=0.286 Sum_probs=256.8
Q ss_pred cccEEeccCCcccccccC-CCCCccccccEEeccCCcccccCCchhhcccccceeeccCceeecccCcccCCCCCCcEEE
Q 001171 291 SLRIVQLGFNAFTGVVKP-PNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLR 369 (1133)
Q Consensus 291 ~L~~l~l~~n~l~~~~~~-~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 369 (1133)
.-+.|+++.+.+...-+. ..+..++.-+.||+++|.|..+.+..|.++++|++++|..|.++ .+|...+...+|+.|+
T Consensus 53 ~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~ 131 (873)
T KOG4194|consen 53 NTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLD 131 (873)
T ss_pred CceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEe
Confidence 346788888887653221 12334556677888888888888888888888888888888887 6676666666788888
Q ss_pred ccCCcccccCchhhccCCCccEEEccCCcccccCCCccCCCCCCcEEEccCCcCccccCccccCccccceeecccccccc
Q 001171 370 VANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRG 449 (1133)
Q Consensus 370 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~ 449 (1133)
|.+|.|+......+..++.|+.||||.|.|+.+.-..|..-.++++|+|++|.|+......|..+.+|..|.|+.|+|+.
T Consensus 132 L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNritt 211 (873)
T KOG4194|consen 132 LRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITT 211 (873)
T ss_pred eeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccc
Confidence 88888887777778888888888888888876666666666777888888888877777777777777777788887776
Q ss_pred cCChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEEcccCCCccccCCCcCCcccccEEeccccCCCCCCChhccC
Q 001171 450 NIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFG 529 (1133)
Q Consensus 450 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 529 (1133)
..+..|.++++|+.|+|..|+|.-.....|.++++|+.|.|..|.++..-.+.|..+.++++|+|+.|+++..-..++++
T Consensus 212 Lp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfg 291 (873)
T KOG4194|consen 212 LPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFG 291 (873)
T ss_pred cCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccc
Confidence 66667777777777777777776333455666666666666666666555555666666666666666665544555555
Q ss_pred CCCCcEeeccCCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccccceeecccCccCCCCCccccCCCCccEEE
Q 001171 530 LPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLE 609 (1133)
Q Consensus 530 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 609 (1133)
++.|+.|+|++|.|...-++.++..++|++|+|++|+|+...+.+|..+..|++|+|++|+|+..--..|..+++|+.||
T Consensus 292 Lt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~Ld 371 (873)
T KOG4194|consen 292 LTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLD 371 (873)
T ss_pred cchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhc
Confidence 55555555555555555555555555555555555555555555555555555555555555533333444444555555
Q ss_pred ecCCcccCCCccccccccccCeeecCCCcccCcCchhhhccCCCcEEEeecCCCCccCCccccCcccccccccccccccc
Q 001171 610 LRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSG 689 (1133)
Q Consensus 610 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 689 (1133)
|++|.|++.+.+ ....|..|++|+.|+|.+|++....-.+|..+..|++|||.+|.|..
T Consensus 372 Lr~N~ls~~IED---------------------aa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaS 430 (873)
T KOG4194|consen 372 LRSNELSWCIED---------------------AAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIAS 430 (873)
T ss_pred CcCCeEEEEEec---------------------chhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCccee
Confidence 555544432221 12234455555666666666554333455666666666666666655
Q ss_pred cCCccccccccCcccccccccccccCC
Q 001171 690 AIPADLALISSLRYLNLSRNNLEGEIP 716 (1133)
Q Consensus 690 ~~p~~l~~l~~L~~L~ls~N~l~~~~p 716 (1133)
.-|..|..+ .|+.|-++.-.+-+.+.
T Consensus 431 Iq~nAFe~m-~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 431 IQPNAFEPM-ELKELVMNSSSFLCDCQ 456 (873)
T ss_pred ecccccccc-hhhhhhhcccceEEecc
Confidence 555555555 55555555544444443
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.2e-39 Score=323.47 Aligned_cols=263 Identities=20% Similarity=0.307 Sum_probs=206.4
Q ss_pred cCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.+|...+++|+|.||+||+|++ ++|+.||||+++.+... .....+|++.++.++|+||+.++++|...... -+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l-~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNL-SLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCce-EEEE
Confidence 4688889999999999999965 57999999999765443 34678899999999999999999999877554 8999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|||+ .+|...++... ..+....+..++.++++|++|||++.|+|||+||.|+|++++|.+|++|||+|+.+....
T Consensus 81 Efm~-tdLe~vIkd~~----i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 81 EFMP-TDLEVVIKDKN----IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred Eecc-ccHHHHhcccc----cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 9995 58998887643 458888899999999999999999999999999999999999999999999999775433
Q ss_pred CCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
. ..+..+.|.+|+|||.+.|. .|+..+|+||.|||+.||+-|.+-|.+.++-+....+-+.+..+...+.. ++.
T Consensus 156 ~---~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP--~~~ 230 (318)
T KOG0659|consen 156 R---IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWP--EMT 230 (318)
T ss_pred c---ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCc--ccc
Confidence 2 23334789999999998765 58999999999999999999887777777766666665554433222211 111
Q ss_pred CCC---------CCC--hhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1072 ELD---------PES--SEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1072 ~~~---------~~~--~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+++ ... .-+... ...++++.+++..||.+|+++.|++++
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111 000 001111 122589999999999999999999875
No 24
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.2e-39 Score=347.92 Aligned_cols=268 Identities=21% Similarity=0.321 Sum_probs=208.5
Q ss_pred hcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~l 910 (1133)
.+.|+..++||+|.||.||+|+. .+|+.||+|+++.+..+ .....+|+.||++++||||+++.+...+. ....|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 34678889999999999999965 57999999999765433 35567899999999999999999998776 456799
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
|+|||+. +|..++...+ -.++..++..++.|++.||+|+|++||+|||||.+|||||.+|.+||+|||+|+++..
T Consensus 196 VFeYMdh-DL~GLl~~p~----vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPG----VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEecccc-hhhhhhcCCC----cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9999954 7877776532 3489999999999999999999999999999999999999999999999999997644
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccc-----
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISE----- 1064 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~----- 1064 (1133)
... ...+..+.|.+|+|||.+.|. .|+.++|+||.|||+.||++|++.|.+..+-+....+-+....+.-..
T Consensus 271 ~~~--~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 271 SGS--APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred CCC--cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 332 336778899999999998765 589999999999999999999999987776665665555443322111
Q ss_pred cccCCcCCC-CCCChhHHH----H-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 LLEPGLLEL-DPESSEWEE----F-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 ~~~~~~~~~-~~~~~~~~~----~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+......+. .+......+ + ..+++++..++..||.+|.|+.++++.
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 110011000 011111111 1 123488999999999999999999853
No 25
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.4e-39 Score=350.40 Aligned_cols=255 Identities=21% Similarity=0.327 Sum_probs=207.8
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
..++|++..+||+|+||.||.|+.+ +|..+|+|++++... ..+.++.|-.+|...++|.||+++..|.+. +..|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~-~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK-EYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC-CeeE
Confidence 4568999999999999999999765 699999999987543 235678899999999999999999999887 5569
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||++||++..+|.+.+ .+++.....++.+++.|++.+|+.|+|||||||+|+|||..|++|++|||++.-..
T Consensus 218 LiMEylPGGD~mTLL~~~~-----~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKD-----TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEecCCccHHHHHHhcC-----cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhh
Confidence 9999999999999999854 48899999999999999999999999999999999999999999999999984332
Q ss_pred cCC--------------------CCCC-----C-------------------CCCCCCCCCccCccccCCCCCCCCCchh
Q 001171 990 ATP--------------------AEAS-----S-------------------STTPIGSLGYVSPEAASTGQPTKEADVY 1025 (1133)
Q Consensus 990 ~~~--------------------~~~~-----~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dvw 1025 (1133)
... .... . ....+|||.|||||++.+..|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 210 0000 0 0134799999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCC---
Q 001171 1026 SFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRP--- 1102 (1133)
Q Consensus 1026 SlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP--- 1102 (1133)
|+|||+|||+.|.+||....+.++.+.+......-.+++..+.. ..+.++|.+|+. ||++|.
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s--------------~eA~DLI~rll~-d~~~RLG~~ 437 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLS--------------DEAKDLITRLLC-DPENRLGSK 437 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCccc--------------HHHHHHHHHHhc-CHHHhcCcc
Confidence 99999999999999999999888887776643332222222111 122389999998 999996
Q ss_pred CHHHHHHH
Q 001171 1103 SMADIVFM 1110 (1133)
Q Consensus 1103 s~~evl~~ 1110 (1133)
.+.||.++
T Consensus 438 G~~EIK~H 445 (550)
T KOG0605|consen 438 GAEEIKKH 445 (550)
T ss_pred cHHHHhcC
Confidence 47777643
No 26
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=327.25 Aligned_cols=209 Identities=22% Similarity=0.420 Sum_probs=184.6
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.++|+..+.||.|+||.|..++.+ +|..+|+|++.+...- .+....|-.+++.+.||.++++++.+.+.. ..++
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~-~lym 121 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS-NLYM 121 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC-eEEE
Confidence 357889999999999999999876 5889999999754331 244567999999999999999999888764 4599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||++||.|+.++++.++ +++..++.+|.+|+.|++|||+.+|++||+||+|||+|++|++||+|||+|+.+.
T Consensus 122 vmeyv~GGElFS~Lrk~~r-----F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~- 195 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRKSGR-----FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS- 195 (355)
T ss_pred EEeccCCccHHHHHHhcCC-----CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec-
Confidence 9999999999999998654 8899999999999999999999999999999999999999999999999998652
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHH
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQ 1056 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~ 1056 (1133)
....+.+|||.|+|||++....|.+++|.|||||++|||+.|.+||.......+++.+.+.
T Consensus 196 -----~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~ 256 (355)
T KOG0616|consen 196 -----GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG 256 (355)
T ss_pred -----CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC
Confidence 2355679999999999999999999999999999999999999999888887777776553
No 27
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=337.64 Aligned_cols=274 Identities=20% Similarity=0.336 Sum_probs=211.5
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
..+.|++.++||.|..++||+|+. ..++.||||++.-+. .+.+.+.+|++.|+.++||||+.++..|..+. ..|+|
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~-~LWvV 102 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS-ELWVV 102 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc-eeEEe
Confidence 345799999999999999999976 468999999996433 23578999999999999999999999888764 45999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|.||.+||+.++++..-... +++..+..|.+++++||.|||.+|.||||||+.||||+.+|.+||+|||.+-.....
T Consensus 103 mpfMa~GS~ldIik~~~~~G---l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDG---LEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHcccc---ccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 99999999999999865433 889999999999999999999999999999999999999999999999998665554
Q ss_pred CCCCCCC-CCCCCCCCccCccccC--CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 992 PAEASSS-TTPIGSLGYVSPEAAS--TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 992 ~~~~~~~-~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
....... ...+||+.|||||++. ...|+.|+||||||++..|+.+|+.||....+..+.-...+ . ..+.....
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq---n-~pp~~~t~ 255 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ---N-DPPTLLTS 255 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc---C-CCCCcccc
Confidence 3222222 5678999999999953 34589999999999999999999999976665443322211 1 11111100
Q ss_pred CcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHH--HhcCcCCCCCC
Q 001171 1069 GLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFM--LEGCRVGPDMP 1121 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~--Le~~~~~~~~~ 1121 (1133)
. ...++...+...+ +++..|+++||.+|||+++++++ +...+.....+
T Consensus 256 ~-----~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~~~~ 306 (516)
T KOG0582|consen 256 G-----LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKEYLV 306 (516)
T ss_pred c-----CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchhhcc
Confidence 0 0112222222233 68888999999999999999954 44444444433
No 28
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=358.10 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=206.2
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccC-----C-cCHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDG-----T-IDENTFRKEAEALGKVK-HRNLTVLRGYYAGPPD 906 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~-----~-~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~ 906 (1133)
..++|.+.+.||+|+||.||.|.+ .+|+.||+|.+.+. . ...+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 456899999999999999999966 46899999976543 1 12456778999999999 9999999999988765
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC-CceEEeccCcc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD-FEAHLSEFGLD 985 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 985 (1133)
.++||||+.+|+|.+++...++ +.+.....+++|++.|++|||++||+||||||+||++|.+ +.+||+|||++
T Consensus 95 -~~ivmEy~~gGdL~~~i~~~g~-----l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 -IYIVMEYCSGGDLFDYIVNKGR-----LKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred -EEEEEEecCCccHHHHHHHcCC-----CChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 6999999999999999998433 7778999999999999999999999999999999999999 99999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCC-C-CCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-P-TKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIS 1063 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 1063 (1133)
.... .........+||+.|+|||++.+.. | +.++||||+||++|.|++|+.||.......+...+.+. .-.++
T Consensus 169 ~~~~---~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~--~~~~p 243 (370)
T KOG0583|consen 169 AISP---GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG--EFKIP 243 (370)
T ss_pred cccC---CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC--CccCC
Confidence 7542 2334566789999999999998877 7 58999999999999999999999876555555543221 11122
Q ss_pred ccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1064 ELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
..+. . ..+..++.+|+..||.+|+++.||+ .-.-++
T Consensus 244 ~~~~---------S------~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 244 SYLL---------S------PEARSLIEKMLVPDPSTRITLLEIL-EHPWFQ 279 (370)
T ss_pred CCcC---------C------HHHHHHHHHHcCCCcccCCCHHHHh-hChhhc
Confidence 2221 0 1123788999999999999999999 433333
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.2e-38 Score=363.36 Aligned_cols=265 Identities=23% Similarity=0.361 Sum_probs=203.6
Q ss_pred HhcCCCcccccccccceeEEEEEE------CCceEEEEEEcccCCc--CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY------QDGMVLSIRRLRDGTI--DENTFRKEAEALGKV-KHRNLTVLRGYYAGPP 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 905 (1133)
..++|++.++||+|+||.||+|.+ ..++.||||++..... ..+.+.+|+++++++ +||||+++++++....
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 356899999999999999999964 2357899999975432 235688999999999 8999999999988766
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccC-------------------------------------------------------
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQ------------------------------------------------------- 930 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 930 (1133)
...++||||+++|+|.+++......
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 6678999999999999999763210
Q ss_pred --CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCcc
Q 001171 931 --DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYV 1008 (1133)
Q Consensus 931 --~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~ 1008 (1133)
....+++..+..++.||++||+|||++||+||||||+||+++.++.+||+|||+++....... ........++..|+
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~~y~ 243 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGSARLPLKWM 243 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc-hhcccCCCCCcccc
Confidence 012477888899999999999999999999999999999999999999999999875432211 11122334667899
Q ss_pred CccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhH
Q 001171 1009 SPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGV 1087 (1133)
Q Consensus 1009 aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1087 (1133)
|||++.+..++.++|||||||++|||++ |..||......... ......+..... . .... ....
T Consensus 244 aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~---~~~~~~~~~~~~-----~--~~~~------~~l~ 307 (338)
T cd05102 244 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEF---CQRLKDGTRMRA-----P--ENAT------PEIY 307 (338)
T ss_pred CcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHH---HHHHhcCCCCCC-----C--CCCC------HHHH
Confidence 9999988899999999999999999997 99999754432211 111111111000 0 0000 1123
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1088 KVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1088 ~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
+++.+||+.||++||++.|+++.|+.+..
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 78999999999999999999999998654
No 30
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-39 Score=354.94 Aligned_cols=250 Identities=20% Similarity=0.319 Sum_probs=203.1
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcC-HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
....|+.-.+||+|+.|.||.|.. ..++.||||++...... ++-+.+|+.+|+..+|+|||.+++.|...+ ..|+||
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d-eLWVVM 349 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD-ELWVVM 349 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccc-eeEEEE
Confidence 345788889999999999999954 56899999999765554 455789999999999999999999887764 459999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|||+||+|.+.+... .+++.++..|++++++||+|||.+||+|||||.+|||++.+|.+||+|||++..+...
T Consensus 350 Eym~ggsLTDvVt~~------~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~- 422 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKT------RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE- 422 (550)
T ss_pred eecCCCchhhhhhcc------cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccc-
Confidence 999999999999863 3889999999999999999999999999999999999999999999999998765332
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.......+||+.|||||+.....|+.++||||||++++||+.|++||..+.+-.....+.. .+ .++ +
T Consensus 423 --~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~---ng-~P~-----l-- 489 (550)
T KOG0578|consen 423 --QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT---NG-TPK-----L-- 489 (550)
T ss_pred --cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh---cC-CCC-----c--
Confidence 2355678999999999999999999999999999999999999999976544322222211 11 111 1
Q ss_pred CCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHH
Q 001171 1073 LDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
...+.....+ ++..+|++.||++||++.|++++
T Consensus 490 -----k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 490 -----KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred -----CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1111222222 56778999999999999999964
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.2e-39 Score=349.52 Aligned_cols=246 Identities=24% Similarity=0.374 Sum_probs=201.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCH---HHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~---~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+....+ +.+.+|++|+++++|||||.++++|+...+. ++|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~-~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHL-WVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceE-EEEe
Confidence 47888899999999999999665 58999999997655444 5678999999999999999999999987554 9999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+.| +|.+++...+ .++++.+..++.+++.||.|||+.+|.|||+||.||+++..+.+|+||||+||....
T Consensus 81 e~a~g-~L~~il~~d~-----~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-- 152 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDG-----KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST-- 152 (808)
T ss_pred hhhhh-hHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc--
Confidence 99966 9999998754 389999999999999999999999999999999999999999999999999975422
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.....+...|||-|||||...++.|+..+|.||+|||+||+++|++||...+...+++.+.+ +.. .+
T Consensus 153 -~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~---d~v-------~~-- 219 (808)
T KOG0597|consen 153 -NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK---DPV-------KP-- 219 (808)
T ss_pred -CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---CCC-------CC--
Confidence 22344566899999999999999999999999999999999999999976554444433332 211 00
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.......+ ..++...+.+||.+|.+..+++.+
T Consensus 220 p~~~S~~f------~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 220 PSTASSSF------VNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred cccccHHH------HHHHHHHhhcChhhcccHHHHhcC
Confidence 01111222 256667899999999999998853
No 32
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-38 Score=354.45 Aligned_cols=246 Identities=21% Similarity=0.328 Sum_probs=207.0
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
-|++++.||.|+.|.|-.|++. +|+.+|||.+.+.. .....+++|+-||+-+.||||++++++++...+ .|+|.
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~-lylvl 91 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH-LYLVL 91 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCce-EEEEE
Confidence 4788999999999999999775 69999999997652 124678999999999999999999999988744 59999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++|.|++++.+.+. +++.+..+++.||+.|+.|+|+.+|+|||+||+|+|+|..+.+||+|||+|..-
T Consensus 92 Eyv~gGELFdylv~kG~-----l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe---- 162 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP-----LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE---- 162 (786)
T ss_pred EecCCchhHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc----
Confidence 99999999999988654 788899999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCC-CCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQP-TKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
..+....+.||++.|+|||++.|..| +.++||||.|||+|.|+||+.||++.+-..+...++++.-+ ++..+.+
T Consensus 163 ~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~--MPs~Is~--- 237 (786)
T KOG0588|consen 163 VPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE--MPSNISS--- 237 (786)
T ss_pred cCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc--CCCcCCH---
Confidence 23344567899999999999999988 78999999999999999999999866655555555543211 1111111
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.+-+++.+|+..||++|.|++||.++-
T Consensus 238 -------------eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 238 -------------EAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred -------------HHHHHHHHHhccCccccccHHHHhhCc
Confidence 112789999999999999999999874
No 33
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=319.90 Aligned_cols=252 Identities=19% Similarity=0.323 Sum_probs=205.4
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEccc---CCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRD---GTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~---~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
..+.|++.++||+|.|+.||+..+ .+|+.+|+|.+.. ...+.+.+++|+.|.+.++|||||++.+.+.+. .++|+
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~-~~~yl 87 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-SFHYL 87 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc-ceeEE
Confidence 345788999999999999999965 4688888887742 233567889999999999999999999988765 67799
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC---CCceEEeccCcccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLDRL 987 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~ 987 (1133)
|+|+|.|++|..-+-.. ...++..+-.+++||++|++|+|.++|||||+||+|+++.+ ...+|++|||+|..
T Consensus 88 vFe~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EEecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence 99999999998655432 23677788889999999999999999999999999999943 44689999999976
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
+. .......+.|||+|||||++...+|+..+|||+.|||+|-++.|++||.+++...+++.+.+.-- ++..
T Consensus 163 l~----~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~y-----d~~~ 233 (355)
T KOG0033|consen 163 VN----DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAY-----DYPS 233 (355)
T ss_pred eC----CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcccc-----CCCC
Confidence 64 33445668899999999999999999999999999999999999999998888888877766421 1111
Q ss_pred CCcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1068 PGLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.+|..+...+ +++++|+..||.+|.|+.|.+.+=
T Consensus 234 ----------~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~Hp 268 (355)
T KOG0033|consen 234 ----------PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHP 268 (355)
T ss_pred ----------cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCc
Confidence 2223333333 899999999999999999988653
No 34
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.2e-38 Score=321.29 Aligned_cols=265 Identities=23% Similarity=0.313 Sum_probs=210.8
Q ss_pred hcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcCH---HHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDE---NTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~---~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~l 910 (1133)
.++|+..+.|++|+||.||+|++ ++++.||+|+++.+.... -...+|+.++.+++|||||.+..++... -+..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 34688899999999999999976 468999999998655321 2457899999999999999999988653 244699
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
|||||+. +|..+++..+ +.+...++..++.|+++|++|||.+.|+|||||++|+|+...|.+||+|||+||.+..
T Consensus 155 VMe~~Eh-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred eHHHHHh-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 9999964 8999998765 4488888999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
. ....+..+.|.+|+|||.+.+. .|+.++|+||+|||+.||+++++-|.+.+..+..+.+.+... ...+.+.++
T Consensus 230 p---~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llG--tPte~iwpg 304 (419)
T KOG0663|consen 230 P---LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLG--TPSEAIWPG 304 (419)
T ss_pred C---cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhC--CCccccCCC
Confidence 3 2345667889999999998765 589999999999999999999999988777666666665543 233444444
Q ss_pred cCCCCCC----------C---hhHHHH---HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LLELDPE----------S---SEWEEF---LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~~~~~~----------~---~~~~~~---~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+.+++.. . ..+... ...+++....+..||.+|.|+.|.+++
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 4333211 0 111111 123488999999999999999999865
No 35
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-38 Score=331.92 Aligned_cols=248 Identities=21% Similarity=0.328 Sum_probs=209.8
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcC----HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
...+|++.+.||+|.||.|-+|.. ..|+.||||.++++... .-.+++|++||..++||||+.++.+|+..+. .+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK-Iv 129 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK-IV 129 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce-EE
Confidence 345789999999999999999954 67999999999876553 2357899999999999999999999998754 48
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||..+|.|++|+.+.+. +++.+.+.+++||+.|+.|+|.++|+|||||-+|||+|.++++||+|||++-++.
T Consensus 130 ivMEYaS~GeLYDYiSer~~-----LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGS-----LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEEecCCccHHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 99999999999999987543 8899999999999999999999999999999999999999999999999987653
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCCCC-CCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTGQP-TKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
. .....+++|++-|.+||++.+..| ++.+|.||+||++|-++.|.+||++.+...++.++..+ .+ .++
T Consensus 205 ~----~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G----aY---rEP 273 (668)
T KOG0611|consen 205 D----KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG----AY---REP 273 (668)
T ss_pred c----ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc----cc---cCC
Confidence 2 234567899999999999999888 68899999999999999999999988877766665543 21 111
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.-. ..+--+|++|+..+|++|.|+.+|..+-
T Consensus 274 ~~P------------SdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 274 ETP------------SDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred CCC------------chHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 111 1112578999999999999999998764
No 36
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=331.99 Aligned_cols=274 Identities=20% Similarity=0.297 Sum_probs=210.0
Q ss_pred HHHHhcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhc--cCCCeeeEEEEEeCCC---C
Q 001171 832 TLEATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKV--KHRNLTVLRGYYAGPP---D 906 (1133)
Q Consensus 832 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l--~hpniv~l~~~~~~~~---~ 906 (1133)
.....++..+.+.||+|+||.||+|+|+ |+.||||++. ..+++.+.+|.+|++.+ +|+||..+++.-..+. .
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~--srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFS--SRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred HHhhhheeEEEEEecCccccceeecccc-CCceEEEEec--ccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 4456678899999999999999999998 9999999997 44678999999999885 9999999887654332 3
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc--------CCceecccCccceeeCCCCceE
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS--------LDMVHGDIKPQNVLFDADFEAH 978 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~--------~~ivH~Dlkp~NIll~~~~~~k 978 (1133)
..++|++|.+.|||+||+.+ .+++.....+++..+|.||+|||. ..|.|||||+.|||+..++.+.
T Consensus 283 QLwLvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred EEEEeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 45899999999999999997 348889999999999999999993 3499999999999999999999
Q ss_pred EeccCcccccccC-CCCCCCCCCCCCCCCccCccccCCC------CCCCCCchhHHHHHHHHHHhC----------CCCC
Q 001171 979 LSEFGLDRLAIAT-PAEASSSTTPIGSLGYVSPEAASTG------QPTKEADVYSFGIVLLEILTG----------RKPV 1041 (1133)
Q Consensus 979 l~Dfg~a~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~il~el~tg----------~~Pf 1041 (1133)
|+|+|+|...... ..-.......+||.+|||||++... .....+||||||.|+||+.-+ +.||
T Consensus 357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 9999999654433 2223345678999999999998543 224678999999999998763 3677
Q ss_pred ccCC-hhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCC
Q 001171 1042 MFTQ-DEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDM 1120 (1133)
Q Consensus 1042 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~ 1120 (1133)
...- .+.-.+.+++.+-..++..-+++. ....+......+++..||..+|..|-++-.|.+.|.++...++.
T Consensus 437 yd~Vp~DPs~eeMrkVVCv~~~RP~ipnr-------W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~ek 509 (513)
T KOG2052|consen 437 YDVVPSDPSFEEMRKVVCVQKLRPNIPNR-------WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSDEK 509 (513)
T ss_pred ccCCCCCCCHHHHhcceeecccCCCCCcc-------cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcChhh
Confidence 4321 111122222222222222222222 23345555556999999999999999999999999988765554
Q ss_pred C
Q 001171 1121 P 1121 (1133)
Q Consensus 1121 ~ 1121 (1133)
.
T Consensus 510 ~ 510 (513)
T KOG2052|consen 510 I 510 (513)
T ss_pred h
Confidence 4
No 37
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-38 Score=310.54 Aligned_cols=249 Identities=24% Similarity=0.399 Sum_probs=209.9
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.++|++++.||+|.||.||.|+.+ ++-.||+|++.+... .++++.+|++|...++||||.++++||.+.... |+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri-yL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI-YL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecccee-EE
Confidence 457999999999999999999775 578999999976433 357899999999999999999999999887544 99
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
++||.++|+++..++..+. ..+++...+.+..|+|.|+.|+|.++|+||||||+|+|++.++..|++|||.+...
T Consensus 100 ilEya~~gel~k~L~~~~~---~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~-- 174 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRM---KRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-- 174 (281)
T ss_pred EEEecCCchHHHHHHhccc---ccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeec--
Confidence 9999999999999985432 34778888899999999999999999999999999999999999999999988532
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
...+..+.+||..|.|||+..+..++..+|+|++|+..||++.|.+||.....++.++.+.+. +...|..
T Consensus 175 ---p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~-------~~~~p~~ 244 (281)
T KOG0580|consen 175 ---PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV-------DLKFPST 244 (281)
T ss_pred ---CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc-------cccCCcc
Confidence 234556789999999999999999999999999999999999999999877777777776663 1111111
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
. . ..+.++|.+|+..+|.+|.+..|++++=
T Consensus 245 i---s--------~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 245 I---S--------GGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred c---C--------hhHHHHHHHHhccCccccccHHHHhhhH
Confidence 1 0 0123899999999999999999998763
No 38
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-38 Score=354.95 Aligned_cols=265 Identities=25% Similarity=0.361 Sum_probs=211.4
Q ss_pred HHHHhcCCCcccccccccceeEEEEEECC--c--eE-EEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEe
Q 001171 832 TLEATRQFDEENVLSRGRYGLIFKASYQD--G--MV-LSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYA 902 (1133)
Q Consensus 832 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~--g--~~-vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 902 (1133)
++..-++..+.++||+|+||.||+|.++. + .. ||||..+.+. ....+|.+|+++|++++|||||+++|++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 33344566677999999999999997643 3 23 8999987422 23467899999999999999999999998
Q ss_pred CCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEecc
Q 001171 903 GPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEF 982 (1133)
Q Consensus 903 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df 982 (1133)
.... .++|||+|.||+|.+++++.+. .++..++..++.+.|+||+|||+++++||||.++|+|++.++.+||+||
T Consensus 232 ~~~P-l~ivmEl~~gGsL~~~L~k~~~----~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 232 LEEP-LMLVMELCNGGSLDDYLKKNKK----SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred CCCc-cEEEEEecCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcc
Confidence 7654 4999999999999999998653 4899999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcc
Q 001171 983 GLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQ 1061 (1133)
Q Consensus 983 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~ 1061 (1133)
|+++.... .........-..+|+|||.+..+.|+.++|||||||++||+++ |..||.+....++..++.....+..
T Consensus 307 GLs~~~~~---~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~ 383 (474)
T KOG0194|consen 307 GLSRAGSQ---YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMP 383 (474)
T ss_pred ccccCCcc---eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCC
Confidence 99875421 1111112235579999999999999999999999999999999 8999998888877777744322221
Q ss_pred ccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCC
Q 001171 1062 ISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDM 1120 (1133)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~ 1120 (1133)
.+. . ..... ..++.+||..||++||+|.++.+.++.+......
T Consensus 384 ~~~-----------~---~p~~~--~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 384 IPS-----------K---TPKEL--AKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred CCC-----------C---CHHHH--HHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 111 0 11111 1566789999999999999999999988776654
No 39
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=345.58 Aligned_cols=242 Identities=24% Similarity=0.415 Sum_probs=194.8
Q ss_pred cccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCH
Q 001171 841 EENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNL 920 (1133)
Q Consensus 841 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL 920 (1133)
..+-+|+|+.|.||.|+.+ ++.||||+++.- -+.+++-|++++||||+.+.|+|...+ ..+||||||..|-|
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~el------kETdIKHLRkLkH~NII~FkGVCtqsP-cyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVREL------KETDIKHLRKLKHPNIITFKGVCTQSP-CYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhh------hhhhHHHHHhccCcceeeEeeeecCCc-eeEEeeeccccccH
Confidence 4567999999999999987 788999998632 245788899999999999999998874 44899999999999
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCC
Q 001171 921 ATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000 (1133)
Q Consensus 921 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 1000 (1133)
+..++.. ..+.......+..+||.||.|||.+.|||||||.-||||..+..+||+|||-++.... ......
T Consensus 200 ~~VLka~-----~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~----~STkMS 270 (904)
T KOG4721|consen 200 YEVLKAG-----RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD----KSTKMS 270 (904)
T ss_pred HHHHhcc-----CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh----hhhhhh
Confidence 9999863 4477778888999999999999999999999999999999999999999999875432 234456
Q ss_pred CCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhH
Q 001171 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEW 1080 (1133)
Q Consensus 1001 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1080 (1133)
+.||..|||||++.....+.|+||||||||||||+||..||...+...+.--+ ..+.+.++-...-.
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV-------------GsNsL~LpvPstcP 337 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV-------------GSNSLHLPVPSTCP 337 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEec-------------cCCcccccCcccCc
Confidence 78999999999999999999999999999999999999999654433222111 11111111100001
Q ss_pred HHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1081 EEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1081 ~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
+.|. -++..||+..|..||++.+|+.+|+-..
T Consensus 338 ~Gfk---lL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 338 DGFK---LLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred hHHH---HHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 1121 3678899999999999999999998754
No 40
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=374.24 Aligned_cols=265 Identities=25% Similarity=0.395 Sum_probs=213.2
Q ss_pred hcCCCcccccccccceeEEEEEECC--c----eEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD--G----MVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~--g----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 907 (1133)
....+..+.||+|.||.||+|...+ | ..||||.+++.. .+..+|.+|+.+|+.++|||||+++|++.+.. .
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~-~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG-P 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC-C
Confidence 4466788999999999999997643 4 359999997653 34578999999999999999999999998854 4
Q ss_pred EEEEEeccCCCCHHHHHHhhccCC--CCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQD--GHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
.++++|||++|+|..+++..+... ...+.......++.|||+|+.||+++++|||||.++|+|+++...+||+|||+|
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchh
Confidence 499999999999999999874322 345888899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
|....... ........-...|||||.+..+.++.|+|||||||++||++| |..||...+..++...+...- +-+.+.
T Consensus 850 rDiy~~~y-yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P~ 927 (1025)
T KOG1095|consen 850 RDIYDKDY-YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPPS 927 (1025)
T ss_pred Hhhhhchh-eeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCCC
Confidence 84433221 111111234468999999999999999999999999999999 999998888877776555543 222222
Q ss_pred cccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCC
Q 001171 1065 LLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPD 1119 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~ 1119 (1133)
.+...+ .+++..||+.+|++||++..|++.++.+.....
T Consensus 928 ~CP~~l----------------y~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 928 YCPEKL----------------YQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred CCChHH----------------HHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 222111 178999999999999999999998887765443
No 41
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-38 Score=330.08 Aligned_cols=264 Identities=21% Similarity=0.307 Sum_probs=200.6
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCC----cEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPD----VRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----~~~lV~ 912 (1133)
.|...+++|.|+||.||+|... +++.||||++-.+.. --.+|+++|++++|||||++..+|....+ +..+||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 4677899999999999999775 479999999865443 33579999999999999999988864322 234899
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC-CceEEeccCcccccccC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD-FEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+ .+|.++++..... +..++...+..+.+||.+|++|||+.||+||||||.|+|+|.+ |.+||||||.|+.....
T Consensus 102 eymP-~tL~~~~r~~~~~-~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 102 EYMP-ETLYRVIRHYTRA-NQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred Hhch-HHHHHHHHHHhhc-CCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 9995 5899999864332 3457788888899999999999999999999999999999987 88999999999876443
Q ss_pred CCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc--cC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL--EP 1068 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 1068 (1133)
. .......|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.+..+....+.+.+..+.-.++. .+
T Consensus 180 e----pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 180 E----PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred C----CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence 2 23456788899999998765 58999999999999999999999998877777666666655433211111 01
Q ss_pred C-----cCCCCCCC----hhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1069 G-----LLELDPES----SEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1069 ~-----~~~~~~~~----~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ..++.... -....-...++++.+++..+|.+|.++.|++.+
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 1 00000000 000011233488999999999999999999843
No 42
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=332.91 Aligned_cols=266 Identities=23% Similarity=0.319 Sum_probs=206.0
Q ss_pred HHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---------------CHHHHHHHHHHHhhccCCCeeeE
Q 001171 834 EATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---------------DENTFRKEAEALGKVKHRNLTVL 897 (1133)
Q Consensus 834 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~hpniv~l 897 (1133)
...++|++.+.||+|.||.|-+|+.. +++.||||++.+... ..+.+.+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 35568999999999999999999764 689999999954321 12578999999999999999999
Q ss_pred EEEEeCCC-CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCc
Q 001171 898 RGYYAGPP-DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFE 976 (1133)
Q Consensus 898 ~~~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~ 976 (1133)
+.+..++. +..|+|+|||..|.+...- .....+.+.++++++.+++.||+|||.+|||||||||+|+|++++|+
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p-----~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCP-----PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCC-----CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc
Confidence 99997653 4558999999988764321 11222889999999999999999999999999999999999999999
Q ss_pred eEEeccCcccccccCCCC--CCCCCCCCCCCCccCccccCCCC----CCCCCchhHHHHHHHHHHhCCCCCccCChhhHH
Q 001171 977 AHLSEFGLDRLAIATPAE--ASSSTTPIGSLGYVSPEAASTGQ----PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050 (1133)
Q Consensus 977 ~kl~Dfg~a~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~ 1050 (1133)
+||+|||.+......... .......+|||.|+|||...++. .+.+.||||+||++|.|+.|+.||......++.
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF 328 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH
Confidence 999999998655333211 11223478999999999987633 368889999999999999999999766665655
Q ss_pred HHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCC
Q 001171 1051 KWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDM 1120 (1133)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~ 1120 (1133)
+.+.... ..++.. . +.....-++|.+++.+||+.|.+..+|..+......+...
T Consensus 329 ~KIvn~p-------------L~fP~~-p--e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~ 382 (576)
T KOG0585|consen 329 DKIVNDP-------------LEFPEN-P--EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSP 382 (576)
T ss_pred HHHhcCc-------------ccCCCc-c--cccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCC
Confidence 5544321 011111 0 1111222899999999999999999999888776654443
No 43
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8.2e-37 Score=340.13 Aligned_cols=246 Identities=17% Similarity=0.299 Sum_probs=197.8
Q ss_pred cccccccceeEEEEEECCceEEEEEEcccCCcCH----HHHHHHHHHHhhccCCCeeeEEEEEeC--C-CCcEEEEEecc
Q 001171 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDE----NTFRKEAEALGKVKHRNLTVLRGYYAG--P-PDVRLLVYDYM 915 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----~~~~~E~~~l~~l~hpniv~l~~~~~~--~-~~~~~lV~e~~ 915 (1133)
..||+|++|.||+|.+ +|+.||||++....... +.+.+|++++++++||||+++++++.+ . ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999988 58999999997654332 567799999999999999999999865 2 23558999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC-CceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
++|+|.+++... ..+++..+..++.+++.|++|||+. +++||||||+||+++.++.+|++|||+++.....
T Consensus 105 ~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~--- 176 (283)
T PHA02988 105 TRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP--- 176 (283)
T ss_pred CCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc---
Confidence 999999999763 2478999999999999999999984 8999999999999999999999999998754221
Q ss_pred CCCCCCCCCCCCccCccccCC--CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 995 ASSSTTPIGSLGYVSPEAAST--GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.....|+..|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.....+.. .
T Consensus 177 ---~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~------ 243 (283)
T PHA02988 177 ---PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK----L------ 243 (283)
T ss_pred ---cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC----C------
Confidence 123468889999999976 6789999999999999999999999987665555444332211111 0
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
+.. ... ...+++.+||+.||++||++.|+++.|+.++.
T Consensus 244 -~~~---~~~--~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 244 -PLD---CPL--EIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred -CCc---CcH--HHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 000 011 12378999999999999999999999987653
No 44
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=347.84 Aligned_cols=242 Identities=21% Similarity=0.385 Sum_probs=202.3
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 908 (1133)
..++|.+.++||+|.||+|+.|..+ +++.+|||+++++.+ +.+....|.+|+..+ +||.++.++..|...+ ..
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~-~l 444 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE-HL 444 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC-eE
Confidence 4568999999999999999999876 588999999987643 356778899998888 5999999999998764 45
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
|+||||+.||++..+.+ ...+++..+..++..|+.||+|||++||||||||-+|||+|.+|++||+|||+++..
T Consensus 445 ~fvmey~~Ggdm~~~~~------~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIH------TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEEecCCCcEEEEEe------cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccccccc
Confidence 99999999998443333 245899999999999999999999999999999999999999999999999999753
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
. ..+....+.+||+.|||||++.+..|+.++|.|||||+||||+.|+.||.+.+.+++.+.+... +..-|
T Consensus 519 m---~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d-------~~~yP 588 (694)
T KOG0694|consen 519 M---GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND-------EVRYP 588 (694)
T ss_pred C---CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC-------CCCCC
Confidence 2 2344667889999999999999999999999999999999999999999988888887776542 22222
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCH
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSM 1104 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~ 1104 (1133)
.+.. ...+.++.+++..+|++|..+
T Consensus 589 ~~ls-----------~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 589 RFLS-----------KEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred Cccc-----------HHHHHHHHHHhccCcccccCC
Confidence 2221 123478889999999999866
No 45
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=321.04 Aligned_cols=273 Identities=22% Similarity=0.329 Sum_probs=209.0
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCC-eeeEEEEEeCCCC----
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRN-LTVLRGYYAGPPD---- 906 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpn-iv~l~~~~~~~~~---- 906 (1133)
...|+..++||+|+||+||+|+.+ +|+.||+|+++-... ......+|+.++++++|+| ||.+++++.....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 345777888999999999999764 689999999975433 2456788999999999999 9999999987653
Q ss_pred -cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 907 -VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 907 -~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
..++|+||+ .-+|.+++....... ..++...+..+++||++|++|||+++|+||||||+||+++++|.+|++|||+|
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 668999999 569999998755321 33666788999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
+...- .....+..++|.+|+|||++.+. .|+...||||+|||++||++++.-|.+..+.+....+-+....+. +
T Consensus 168 ra~~i---p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~--e 242 (323)
T KOG0594|consen 168 RAFSI---PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN--E 242 (323)
T ss_pred HHhcC---CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC--c
Confidence 84421 11224556789999999999877 689999999999999999999999987777665555555443321 1
Q ss_pred cccCCcCCCC------CC---ChhHHHH-----HHhHhhhhccCCCCCCCCCCHHHHHHH--HhcCc
Q 001171 1065 LLEPGLLELD------PE---SSEWEEF-----LLGVKVGLLCTAPDPLDRPSMADIVFM--LEGCR 1115 (1133)
Q Consensus 1065 ~~~~~~~~~~------~~---~~~~~~~-----~~~~~li~~Cl~~dP~~RPs~~evl~~--Le~~~ 1115 (1133)
...|+....+ +. ....... ....+++.+|++.+|.+|.|++.++++ +....
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 1111111000 00 1111111 123489999999999999999999987 55543
No 46
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-37 Score=321.40 Aligned_cols=279 Identities=22% Similarity=0.336 Sum_probs=210.7
Q ss_pred HHHhcCCCcccccccccceeEEEEEE-CCceEEEEEEccc---CCcCHHHHHHHHHHHhhccCCCeeeEEEEEeC----C
Q 001171 833 LEATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRD---GTIDENTFRKEAEALGKVKHRNLTVLRGYYAG----P 904 (1133)
Q Consensus 833 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~---~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~ 904 (1133)
.+...+|...+.||+|+||.|+.|.. ++|+.||||++.. .....++..+|+++++.++|+||+.+.+.+.. .
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 34556677789999999999999966 4689999999963 33445778899999999999999999998864 2
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCc
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGL 984 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 984 (1133)
-...|+|+|+| +.+|.+.++.. +.++......+.+||++|+.|+|+.+|+|||+||+|++++.+...||+|||+
T Consensus 98 f~DvYiV~elM-etDL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 98 FNDVYLVFELM-ETDLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred cceeEEehhHH-hhHHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccc
Confidence 24459999999 67899999863 3388889999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCccCccccC-CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc--
Q 001171 985 DRLAIATPAEASSSTTPIGSLGYVSPEAAS-TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ-- 1061 (1133)
Q Consensus 985 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~-- 1061 (1133)
||..... ......+..+.|.+|+|||.+. ...|+.+.||||.|||+.||++|++-|.+.+.-+....+......+.
T Consensus 172 AR~~~~~-~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 172 ARYLDKF-FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred eeecccc-CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 9876544 3344457788999999999975 45799999999999999999999999976554333333322221110
Q ss_pred ---------ccccccCCcCCCCCCChhHHHH-----HHhHhhhhccCCCCCCCCCCHHHHHHH--HhcCcCCCCCC
Q 001171 1062 ---------ISELLEPGLLELDPESSEWEEF-----LLGVKVGLLCTAPDPLDRPSMADIVFM--LEGCRVGPDMP 1121 (1133)
Q Consensus 1062 ---------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~li~~Cl~~dP~~RPs~~evl~~--Le~~~~~~~~~ 1121 (1133)
...++... ... ....+... ..++++..+|+..||.+|+|++|.+++ ++..-...+.|
T Consensus 251 ~l~~i~s~~ar~yi~sl-p~~--p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSL-PQI--PKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHHhccHHHHHHHHhC-CCC--CCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 00010000 000 01111111 233589999999999999999999975 45555555544
No 47
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3e-36 Score=331.28 Aligned_cols=252 Identities=21% Similarity=0.419 Sum_probs=204.6
Q ss_pred cCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
.+|++.+.||+|+||.||+|+++++..+|+|.+.......+.+.+|++++++++||||+++++++.... ..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK-PLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCC-CEEEEEEcCC
Confidence 458889999999999999999988889999998776666788999999999999999999999987764 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.++++... ..+++..+..++.|++.|++|||++||+||||||+||+++.++.++++|||.++....... .
T Consensus 83 ~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--~ 156 (256)
T cd05114 83 NGCLLNYLRQRQ----GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--T 156 (256)
T ss_pred CCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce--e
Confidence 999999987532 2378999999999999999999999999999999999999999999999999875422111 1
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
......++..|+|||++.+..++.++||||||+++|||++ |+.||...+..+....+.+.... ..+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~------~~~~~----- 225 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL------YRPKL----- 225 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC------CCCCC-----
Confidence 1122345668999999988889999999999999999999 89999776655555554332110 00100
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
. . ....+++.+||+.+|.+||+++|+++.|.
T Consensus 226 ~----~--~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 226 A----S--MTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred C----C--HHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0 0 12248899999999999999999998873
No 48
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-36 Score=328.13 Aligned_cols=266 Identities=21% Similarity=0.357 Sum_probs=215.4
Q ss_pred HHhcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 834 EATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 834 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
-+.+...+.++||+|.||+|..+....+..||||.++.+... ..+|.+|+++|.+++|||||+++|+|..++.. ++|
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi-cmI 613 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL-CMI 613 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch-HHH
Confidence 356677889999999999999999988899999999865543 36899999999999999999999999887555 899
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
+|||++|+|.+++.++.... ..-..-..|+.|||.|++||.+.++||||+.++|+|+|+++++||+|||++|-....
T Consensus 614 ~EYmEnGDLnqFl~aheapt---~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPT---AETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHhcCcHHHHHHhccCcc---cccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccC
Confidence 99999999999999864321 334445669999999999999999999999999999999999999999999855433
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh--CCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT--GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t--g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
+. .......+-..+|||||.+.-++++.++|||+||+++||+++ .+.||....+++.++........+....++...
T Consensus 691 ~y-y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P 769 (807)
T KOG1094|consen 691 DY-YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRP 769 (807)
T ss_pred Cc-eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCC
Confidence 22 222334456679999999999999999999999999999876 788998888888777766655544333332211
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
...... ..+++.+||..|-++||+++++...|.+.
T Consensus 770 ------~~cp~~----lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 770 ------PACPQG----LYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ------CcCcHH----HHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 111111 12788999999999999999999998763
No 49
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.1e-36 Score=348.97 Aligned_cols=260 Identities=23% Similarity=0.352 Sum_probs=200.1
Q ss_pred HhcCCCcccccccccceeEEEEEE------CCceEEEEEEcccCCc--CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY------QDGMVLSIRRLRDGTI--DENTFRKEAEALGKV-KHRNLTVLRGYYAGPP 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 905 (1133)
..++|++.++||+|+||.||+|.+ ..+..||||+++.... ..+.+.+|+++++.+ +||||+++++++....
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 345799999999999999999964 2367899999864332 245788999999999 8999999999998765
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccC-------------------------------------------------------
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQ------------------------------------------------------- 930 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 930 (1133)
. .++||||+++|+|.++++.....
T Consensus 113 ~-~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 113 P-TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred c-ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 4 59999999999999999753210
Q ss_pred ---------------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 931 ---------------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 931 ---------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
....+++..+..++.||++||+|||+.+|+||||||+||+++.++.+|++|||+++....... .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~ 270 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-Y 270 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc-c
Confidence 112478888999999999999999999999999999999999999999999999875432211 1
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChh-hHHHHHHHHhhhccccccccCCcCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDE-DIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......++..|+|||++.+..++.++|||||||++|||++ |..||...... ...+.+...... . .+..
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~----~--~~~~--- 341 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM----L--SPEC--- 341 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC----C--CCCC---
Confidence 11222345678999999999999999999999999999998 88998654332 233322221100 0 0000
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.. ....+++.+||+.||++||++.||++.|++
T Consensus 342 --~~------~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 342 --AP------SEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred --CC------HHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 00 112378999999999999999999999986
No 50
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.7e-36 Score=338.59 Aligned_cols=266 Identities=23% Similarity=0.344 Sum_probs=202.3
Q ss_pred hcCCCcccccccccceeEEEEEECC-----------------ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeee
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD-----------------GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTV 896 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~ 896 (1133)
.++|.+.++||+|+||.||+|.+++ +..||+|.+..... ....+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578899999999999999997532 34799999875432 2357889999999999999999
Q ss_pred EEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccC--------------CCCCCChHHHHHHHHHHHHHHHHHhcCCceec
Q 001171 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQ--------------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHG 962 (1133)
Q Consensus 897 l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~--------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~ 962 (1133)
+++++.... ..++||||+++|+|.+++...... ....+++..+..++.||+.|++|||+.||+||
T Consensus 84 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~ 162 (304)
T cd05096 84 LLGVCVDED-PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR 162 (304)
T ss_pred EEEEEecCC-ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 999998764 459999999999999998764311 11246788899999999999999999999999
Q ss_pred ccCccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh--CCCC
Q 001171 963 DIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT--GRKP 1040 (1133)
Q Consensus 963 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t--g~~P 1040 (1133)
||||+||+++.++.+||+|||+++....... ........++..|+|||++.++.++.++|||||||++|||++ +..|
T Consensus 163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 163 DLATRNCLVGENLTIKIADFGMSRNLYAGDY-YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred CcchhheEEcCCccEEECCCccceecccCce-eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999875432211 111223456788999999988889999999999999999987 5678
Q ss_pred CccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1041 VMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1041 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
|......+....+.............. ...... ....+++.+||+.||++||++.||.+.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELTDEQVIENAGEFFRDQGRQVYLF----RPPPCP------QGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCCHHHHHHHHHHHhhhcccccccc----CCCCCC------HHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 876555555554444322211100000 000011 112378999999999999999999998863
No 51
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.6e-37 Score=342.38 Aligned_cols=244 Identities=18% Similarity=0.285 Sum_probs=198.6
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.++||+|+||.||+|..+ +|+.||+|++.... ...+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ-RFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC-CeEEEE
Confidence 36889999999999999999775 68999999986432 1235678899999999999999999888765 456999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~- 153 (291)
T cd05612 80 MEYVPGGELFSYLRNSG-----RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD- 153 (291)
T ss_pred EeCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-
Confidence 99999999999997643 378888999999999999999999999999999999999999999999999865421
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...........+... ...+
T Consensus 154 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~--------- 217 (291)
T cd05612 154 -----RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG--KLEF--------- 217 (291)
T ss_pred -----CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CcCC---------
Confidence 122356899999999999888999999999999999999999999776655544443321 1111
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCC-----HHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS-----MADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~~ 1110 (1133)
+... . ....+++.+|++.||.+||+ +.|++++
T Consensus 218 --~~~~---~--~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 218 --PRHL---D--LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred --CccC---C--HHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 1110 0 11237899999999999995 8888876
No 52
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.9e-36 Score=336.74 Aligned_cols=250 Identities=21% Similarity=0.315 Sum_probs=196.5
Q ss_pred CCcccccccccceeEEEEEE-CCceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 839 FDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
|+..+.||+|+||.||+|.. .+|+.||+|.+..... ....+.+|++++++++|++++.+.+++.... ..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-ALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC-eEEEEEE
Confidence 67889999999999999976 4689999999864322 2345778999999999999999999987764 5599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++|+|.+++..... ..+++..+..++.|++.|++|||+.+|+||||||+||+++.++.++|+|||+++.....
T Consensus 81 ~~~~g~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGN---PGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-- 155 (285)
T ss_pred ecCCCcHHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--
Confidence 9999999988865332 34789999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||...........+......... .+
T Consensus 156 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------~~ 224 (285)
T cd05631 156 --ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQE---------EY 224 (285)
T ss_pred --CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccc---------cC
Confidence 1123457899999999999999999999999999999999999999765443333333322221110 00
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCC-----HHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPS-----MADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~~ 1110 (1133)
... ... ...+++.+||+.||++||+ ++|++++
T Consensus 225 ~~~---~s~--~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 225 SEK---FSE--DAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred Ccc---CCH--HHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 000 001 1237899999999999997 8888864
No 53
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.7e-36 Score=349.07 Aligned_cols=262 Identities=21% Similarity=0.338 Sum_probs=199.5
Q ss_pred HhcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCcC--HHHHHHHHHHHhhc-cCCCeeeEEEEEeCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTID--ENTFRKEAEALGKV-KHRNLTVLRGYYAGPP 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 905 (1133)
..++|++.++||+|+||.||+|.+. ++..||+|++...... ...+.+|+++++.+ +|||||++++++....
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3457999999999999999999742 2457999999754322 34678999999999 8999999999998764
Q ss_pred CcEEEEEeccCCCCHHHHHHhhcc--------------------------------------------------------
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASH-------------------------------------------------------- 929 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 929 (1133)
..++||||+++|+|.+++.....
T Consensus 116 -~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 116 -PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred -CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 45999999999999999865321
Q ss_pred ---------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCC
Q 001171 930 ---------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000 (1133)
Q Consensus 930 ---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 1000 (1133)
.....+++..+++++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....... ......
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-~~~~~~ 273 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-YVVKGN 273 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-eeeccC
Confidence 0112477888899999999999999999999999999999999999999999999865432211 111222
Q ss_pred CCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1001 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
..++..|+|||++.+..++.++|||||||++|||++ |+.||.............+. . .... .+.. ..
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~---~-~~~~-~~~~-----~~-- 341 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR---G-YQMS-RPDF-----AP-- 341 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHc---c-cCcc-CCCC-----CC--
Confidence 345678999999988899999999999999999997 99999654433222222111 1 0000 0000 00
Q ss_pred HHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
....+++.+||+.||++||++.||++.|+++
T Consensus 342 ----~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 342 ----PEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred ----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1123788899999999999999999999875
No 54
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.7e-36 Score=330.15 Aligned_cols=256 Identities=21% Similarity=0.389 Sum_probs=206.4
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.++|++.++||+|+||.||+|...++..||+|.+.......+.+.+|+.++++++||||+++++++.... ..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE-PIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-CcEEEEecC
Confidence 3578999999999999999999888889999998766556678999999999999999999999987764 459999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.++++... ...+++..+..++.|++.|++|||+.+++||||||+||+++.++.++++|||.++.......
T Consensus 84 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-- 158 (261)
T cd05072 84 AKGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-- 158 (261)
T ss_pred CCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCce--
Confidence 9999999997642 23478889999999999999999999999999999999999999999999999875432111
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......++..|+|||++.+..++.++|||||||++|+|++ |+.||...........+...... +...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~--- 227 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM--------PRME--- 227 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC--------CCCC---
Confidence 11222345678999999988889999999999999999998 99999765555544443221100 0000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
... ....+++.+|+..+|++||+++++.+.|+++
T Consensus 228 ----~~~--~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 228 ----NCP--DELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ----CCC--HHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 000 1123789999999999999999999999874
No 55
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=321.83 Aligned_cols=261 Identities=22% Similarity=0.364 Sum_probs=198.1
Q ss_pred CCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhh--ccCCCeeeEEEEEeCCC---CcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGK--VKHRNLTVLRGYYAGPP---DVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~---~~~~lV~ 912 (1133)
..++.++||+|+||.||+|.+. ++.||||+++.. +++.|..|-+|++. ++|+||++++++-.... -..++|+
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ--EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCHH--HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 3456788999999999999987 599999999743 45788888888665 58999999998765432 2348999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc---------CCceecccCccceeeCCCCceEEeccC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS---------LDMVHGDIKPQNVLFDADFEAHLSEFG 983 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~---------~~ivH~Dlkp~NIll~~~~~~kl~Dfg 983 (1133)
||.+.|+|.+++.. .+++|....+|+..+++||+|||+ .+|+|||||++|||+..|+.+.|+|||
T Consensus 288 ~fh~kGsL~dyL~~------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKA------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred eeccCCcHHHHHHh------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 99999999999987 348999999999999999999995 359999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCCccCccccCCCC------CCCCCchhHHHHHHHHHHhCCC------------CCc---
Q 001171 984 LDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ------PTKEADVYSFGIVLLEILTGRK------------PVM--- 1042 (1133)
Q Consensus 984 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG~il~el~tg~~------------Pf~--- 1042 (1133)
+|..+.+... .......+||.+|||||++.+.- .-.+.||||+|.|+|||+++.. ||.
T Consensus 362 LAl~~~p~~~-~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 362 LALRLEPGKP-QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred eeEEecCCCC-CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 9987654433 23344579999999999997643 2256899999999999998643 232
Q ss_pred --cCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCC
Q 001171 1043 --FTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPD 1119 (1133)
Q Consensus 1043 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~ 1119 (1133)
...-+++...+.+...++.+++. +... .......+.+..||+.||+.|.|+.=+-+++.++.....
T Consensus 441 G~hPt~e~mq~~VV~kK~RP~~p~~----W~~h-------~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRKKQRPKIPDA----WRKH-------AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred cCCCCHHHHHHHHHhhccCCCChhh----hhcC-------ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 12234555555554444433322 2211 111112267778999999999999888877776665543
No 56
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-36 Score=336.39 Aligned_cols=252 Identities=19% Similarity=0.326 Sum_probs=211.4
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
.++|...+++|+|+||.++.++++ ++..|++|++...... .+...+|+.++++++|||||.+.+.|..++...++|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 357889999999999999999776 5789999999654432 457789999999999999999999999887767999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|+|++||++.+.+.+.+ +..++++....++.|++.|+.|||+++|+|||||+.|||++.++.++++|||+|+.....
T Consensus 83 m~Y~eGg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 99999999999999866 345899999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
. ......+||+.||.||.+.+..|..|+||||+||++|||++-+++|...+...+...+.+.... +
T Consensus 160 ~---~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~--------P--- 225 (426)
T KOG0589|consen 160 D---SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS--------P--- 225 (426)
T ss_pred h---hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC--------C---
Confidence 2 2345678999999999999999999999999999999999999999888777766665553211 0
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
-...+.... ..++..|+..+|+.||++.+++.+
T Consensus 226 ----lp~~ys~el--~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 226 ----LPSMYSSEL--RSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ----CCccccHHH--HHHHHHHhhcCCccCCCHHHHhhC
Confidence 001111111 157888999999999999999865
No 57
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=345.25 Aligned_cols=244 Identities=19% Similarity=0.293 Sum_probs=197.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+|+++ +++.||+|++.... ...+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN-RVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-EEEEE
Confidence 47899999999999999999875 58999999986432 22356889999999999999999999998764 55999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~- 170 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG-----RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD- 170 (329)
T ss_pred EcCCCCChHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC-
Confidence 99999999999998643 378888889999999999999999999999999999999999999999999865421
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...........+... ...++..+
T Consensus 171 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~--~~~~p~~~----- 238 (329)
T PTZ00263 171 -----RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--RLKFPNWF----- 238 (329)
T ss_pred -----CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CcCCCCCC-----
Confidence 122357899999999999888999999999999999999999999766554444333221 00111100
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCC-----HHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS-----MADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~~ 1110 (1133)
. ....+++.+||+.||.+||+ ++|++++
T Consensus 239 -----~------~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 239 -----D------GRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred -----C------HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0 01237899999999999986 6888755
No 58
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.3e-35 Score=327.14 Aligned_cols=256 Identities=25% Similarity=0.405 Sum_probs=206.3
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.++|++.+.||+|++|.||+|.+.+++.||+|.+.......+.+.+|++++++++|||++++++++.... ..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE-PIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCC-Ceeeeeecc
Confidence 4578999999999999999998877889999999876666778999999999999999999999987764 459999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++.... +..+++..+..++.|++.|+.|||+.||+||||||+||+++.++.++++|||+++.......
T Consensus 84 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-- 158 (261)
T cd05068 84 KYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY-- 158 (261)
T ss_pred cCCcHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc--
Confidence 9999999997643 24588999999999999999999999999999999999999999999999999876532111
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
........+..|+|||++.+..++.++||||||+++|||++ |+.||...........+.+... . . ...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~-~-~~~------ 227 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR---M-P-CPP------ 227 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---C-C-CCC------
Confidence 11112223457999999988889999999999999999999 9999976555444443322110 0 0 000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
... ....+++.+|++.+|.+||++.++++.|+.+
T Consensus 228 ~~~------~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 228 GCP------KELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred cCC------HHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 000 1223788999999999999999999999864
No 59
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.7e-36 Score=329.89 Aligned_cols=254 Identities=25% Similarity=0.411 Sum_probs=200.4
Q ss_pred cCCCcccccccccceeEEEEEEC----CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ----DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.+|++.++||+|+||.||+|.++ .+..||+|.+...... .+.+.+|++++++++||||+++++++.... ..++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~l 83 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN-TMMI 83 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC-CcEE
Confidence 46889999999999999999753 3678999998754322 357889999999999999999999998764 4599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++|+|.+++.... ..+++..++.++.||+.|++|||+.|++||||||+||+++.++.++++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE----GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999997642 2488999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.. ........++..|+|||++.+..++.++|||||||++||+++ |+.||......+....+.+... .. .
T Consensus 160 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~----~~-~--- 229 (266)
T cd05064 160 EA--IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR----LP-A--- 229 (266)
T ss_pred cc--hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC----CC-C---
Confidence 11 111122345678999999998999999999999999999876 9999977666554444322110 00 0
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
+.. ... ...+++.+||+.+|++||++.||.+.|+++
T Consensus 230 -----~~~--~~~--~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 230 -----PRN--CPN--LLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----CCC--CCH--HHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 000 011 122788899999999999999999998764
No 60
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.1e-36 Score=342.07 Aligned_cols=265 Identities=23% Similarity=0.343 Sum_probs=203.1
Q ss_pred HhcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCcC--HHHHHHHHHHHhhc-cCCCeeeEEEEEeCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTID--ENTFRKEAEALGKV-KHRNLTVLRGYYAGPP 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 905 (1133)
..++|++.++||+|+||.||+|... +++.||+|++...... .+.+.+|+++++++ +||||+++++++...+
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 3457999999999999999999542 2578999998753322 34677899999999 8999999999987766
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccC-------------------------------------------------------
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQ------------------------------------------------------- 930 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 930 (1133)
...++||||+++++|.+++......
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 7778999999999999998653211
Q ss_pred -CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccC
Q 001171 931 -DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVS 1009 (1133)
Q Consensus 931 -~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a 1009 (1133)
....+++..+..++.||+.|++|||+.+|+||||||+||+++.++.++|+|||+++....... ........++..|+|
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-~~~~~~~~~~~~y~a 243 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMA 243 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-hhhccCCCCCccccC
Confidence 012578999999999999999999999999999999999999999999999999976532221 111223456678999
Q ss_pred ccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHh
Q 001171 1010 PEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVK 1088 (1133)
Q Consensus 1010 PE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1133)
||++.+..++.++||||+||++|||++ |..||......+... +........ ..+. ... ....+
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~---~~~~~~~~~-~~~~------~~~------~~~~~ 307 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFC---RRLKEGTRM-RAPE------YAT------PEIYS 307 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHH---HHHhccCCC-CCCc------cCC------HHHHH
Confidence 999999999999999999999999998 999996543322211 111111100 0000 000 11237
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1089 VGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1089 li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
++.+||+.+|++||++.|++++|+++..
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 8899999999999999999999987654
No 61
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-39 Score=367.94 Aligned_cols=503 Identities=28% Similarity=0.342 Sum_probs=281.1
Q ss_pred EeccCCcccCcCCCccccccchhhhhhcccccCCCccCcc---CCcceEEEccCCcCCCCCCCCCCCCCcCcEEeccCCc
Q 001171 124 VYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISADI---SPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNS 200 (1133)
Q Consensus 124 L~L~~n~~~g~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~---~~~l~~L~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~ 200 (1133)
+|++..+++ .||..+.+-..|+.|++.+|.+-... -++ .-.|+.||||+|+++ ..|..+..+.+|+.|+++.|-
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~p-l~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRP-LEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCc-hHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 566666666 67777766666888888888764211 111 123666666666664 345555555566666666665
Q ss_pred CCCCCcccccCccccceEecccccccCCCCccccCccccceeeccccccCCCCCCcccCcCcccEEEcccCCccCCcccc
Q 001171 201 FSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVS 280 (1133)
Q Consensus 201 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 280 (1133)
|. ..|.+..++.+|++|.|.+|++. ..|.++..+.+|+.|+++.|.+. .+|..+..++.++.++.++|......
T Consensus 80 i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~l--- 153 (1081)
T KOG0618|consen 80 IR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRL--- 153 (1081)
T ss_pred Hh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhh---
Confidence 55 45555555566666666655554 55555555555555555555554 23444555555555555555111000
Q ss_pred cccCcccccccccEEeccCCcccccccCCCCCccccccEEeccCCcccccCCchhhcccccceeeccCceeecccCcccC
Q 001171 281 VLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVG 360 (1133)
Q Consensus 281 ~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 360 (1133)
+. ..++.++|..|.+.+-.+....++++ .|||++|.+. -..+.
T Consensus 154 ------g~--------------------------~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls 196 (1081)
T KOG0618|consen 154 ------GQ--------------------------TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLS 196 (1081)
T ss_pred ------cc--------------------------ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhh
Confidence 00 01334444444444333444444444 5666666654 12344
Q ss_pred CCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcccccCCCccCCCCCCcEEEccCCcCccccCccccCcccccee
Q 001171 361 SLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETL 440 (1133)
Q Consensus 361 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 440 (1133)
++.+|+.|....|++.... -.-++|+.|+.++|.++...+.. .-.+|+++++++|++++
T Consensus 197 ~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~~--------------- 255 (1081)
T KOG0618|consen 197 NLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLSN--------------- 255 (1081)
T ss_pred hccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecccc--ccccceeeecchhhhhc---------------
Confidence 5566666666666665321 12245556666666554221111 11244445555555543
Q ss_pred ecccccccccCChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEEcccCCCccccCCCcCCcccccEEeccccCCC
Q 001171 441 NLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLS 520 (1133)
Q Consensus 441 ~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 520 (1133)
+|++++.+.+|+.|+..+|+++ .+|..+....+|+.|.+..|.++ .+|.....++.|++|||..|+|.
T Consensus 256 ----------lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~ 323 (1081)
T KOG0618|consen 256 ----------LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP 323 (1081)
T ss_pred ----------chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc
Confidence 3344444444444444444443 44444444444444444444444 34444455555555555555554
Q ss_pred CCCChhccC-CC-CCcEeeccCCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccccceeecccCccCCCCCcc
Q 001171 521 GELPIELFG-LP-SLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAE 598 (1133)
Q Consensus 521 ~~~p~~l~~-l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 598 (1133)
..|..+.. .. .|..|+.+.|++.......=..++.|+.|.+.+|.+++..-..+.++++|+.|+|++|+|.......
T Consensus 324 -~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~ 402 (1081)
T KOG0618|consen 324 -SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASK 402 (1081)
T ss_pred -ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHH
Confidence 33333322 22 2555555566555332111223556777777777777777677777777777777777777444455
Q ss_pred ccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCchhhhccCCCcEEEeecCCCCccCCccccCccccc
Q 001171 599 LGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLT 678 (1133)
Q Consensus 599 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 678 (1133)
+.++..|+.|+||+|+++ .+|..+..++.|++|...+|++. ..| ++..++.|+.+|+|.|+++...-..-..-++|+
T Consensus 403 ~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~Lk 479 (1081)
T KOG0618|consen 403 LRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLK 479 (1081)
T ss_pred HhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccc
Confidence 677777888888888887 47777777888888888888887 666 777788888888888887743322222226788
Q ss_pred ccccccccccccCCccccccccCcccccccc
Q 001171 679 TLNLSTNRLSGAIPADLALISSLRYLNLSRN 709 (1133)
Q Consensus 679 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 709 (1133)
+|||++|.-.-.--..+..+.++..+++.-|
T Consensus 480 yLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 480 YLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred eeeccCCcccccchhhhHHhhhhhheecccC
Confidence 8888888633233344555666666666665
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5.2e-36 Score=342.62 Aligned_cols=252 Identities=22% Similarity=0.303 Sum_probs=201.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+|++. +++.||+|++.... .....+.+|++++++++||||+++++++... ...++|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD-EYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC-CEEEEE
Confidence 36899999999999999999876 58999999986432 1235678899999999999999999999876 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 80 MEYVPGGDFRTLLNNLG-----VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred EeCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 99999999999997643 378889999999999999999999999999999999999999999999999865422
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+.........+...++.
T Consensus 154 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 226 (333)
T cd05600 154 -----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPR-- 226 (333)
T ss_pred -----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccc--
Confidence 2334579999999999998899999999999999999999999998766655544443321111111111100
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ... ....+++.+|+..+|.+||++.|++++
T Consensus 227 ---~---~~s--~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 227 ---F---NLS--DEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ---c---ccC--HHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0 000 112378889999999999999999976
No 63
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-36 Score=302.96 Aligned_cols=250 Identities=22% Similarity=0.395 Sum_probs=205.7
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---------HHHHHHHHHHHhhc-cCCCeeeEEEEEeCC
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---------ENTFRKEAEALGKV-KHRNLTVLRGYYAGP 904 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---------~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 904 (1133)
-.+|...+++|+|..++|-+..++ +|..+|+|++...... .++-.+|+.|++++ -||+|+.+.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 446788899999999999998664 6888999988532211 13456799999998 699999999999876
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCc
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGL 984 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 984 (1133)
...++|+|.|+.|.|++++... -.+++...+.|+.|+.+|++|||.+.||||||||+|||+|++.+++|+|||+
T Consensus 96 -sF~FlVFdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 96 -AFVFLVFDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred -chhhhhhhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccce
Confidence 5558999999999999999864 3488999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCccCccccC------CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhh
Q 001171 985 DRLAIATPAEASSSTTPIGSLGYVSPEAAS------TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQ 1058 (1133)
Q Consensus 985 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 1058 (1133)
|.... .+.+....+|||+|.|||.+. ...|+..+|+|+.|||||-++.|.+||......-+...+.++
T Consensus 170 a~~l~----~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG-- 243 (411)
T KOG0599|consen 170 ACQLE----PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG-- 243 (411)
T ss_pred eeccC----CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc--
Confidence 97653 334556789999999999984 345789999999999999999999999755444444333332
Q ss_pred hccccccccCCcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHH
Q 001171 1059 RGQISELLEPGLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
++.+...+|.+....+ ++|.+|++.||.+|.|++|++++
T Consensus 244 -------------kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 244 -------------KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred -------------ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 2334566677776666 89999999999999999999864
No 64
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.2e-35 Score=326.26 Aligned_cols=252 Identities=21% Similarity=0.362 Sum_probs=203.6
Q ss_pred cCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++|++.+.||+|+||.||+|+++++..+|+|.+.......+.+.+|++++++++||||+++++++.... ..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR-PIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-CcEEEEEcCC
Confidence 468889999999999999998887778999998866666778999999999999999999999997664 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++..... .+++..++.++.||+.|++|||+.|++|+||||+||+++.++.+|++|||.++....... .
T Consensus 83 ~~~l~~~i~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--~ 156 (256)
T cd05113 83 NGCLLNYLREHGK----RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--T 156 (256)
T ss_pred CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce--e
Confidence 9999999976332 478999999999999999999999999999999999999999999999999875432211 1
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
......++..|+|||++.+..++.++|||||||++|||++ |..||......+....+...... . ..
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----~-~~-------- 223 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL----Y-RP-------- 223 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC----C-CC--------
Confidence 1122345678999999988889999999999999999998 99999766655544443322110 0 00
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
.. .. ....+++.+||+.+|++||++.++++.|+
T Consensus 224 ~~--~~--~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 HL--AS--EKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CC--CC--HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00 00 12237889999999999999999998875
No 65
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=331.69 Aligned_cols=249 Identities=21% Similarity=0.344 Sum_probs=197.0
Q ss_pred hcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
...|+..+.||+|+||.||+|.+ +.++.||+|++.-+.. +.+.+++|+.++.+.+++||.++++.|..+. ..+++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-KLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-cHHHHH
Confidence 34677789999999999999966 5689999999964332 3568899999999999999999999888764 458999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|||.||++.+.++.... +++.....+.+++..|+.|+|.++.+|||||+.||++..+|.+|++|||++.....
T Consensus 91 ey~~gGsv~~lL~~~~~-----~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~-- 163 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNI-----LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN-- 163 (467)
T ss_pred HHhcCcchhhhhccCCC-----CccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec--
Confidence 99999999999986433 36666667889999999999999999999999999999999999999999864422
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
......+++||+.|||||++.+..|+.|+||||+|++.+||.+|.+|+....+..+...+ ++-..|.+..
T Consensus 164 -~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI---------pk~~PP~L~~ 233 (467)
T KOG0201|consen 164 -TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI---------PKSAPPRLDG 233 (467)
T ss_pred -hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec---------cCCCCCcccc
Confidence 222336789999999999999889999999999999999999999999755442211111 1111111111
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.....+. +++..|+.+||+.||++.+++++
T Consensus 234 --~~S~~~k------EFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 234 --DFSPPFK------EFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred --ccCHHHH------HHHHHHhhcCcccCcCHHHHhhh
Confidence 1122233 45666999999999999998854
No 66
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=334.67 Aligned_cols=250 Identities=23% Similarity=0.385 Sum_probs=211.1
Q ss_pred HhcCCCcccccccccceeEEEEEECC-ceEEEEEEcccCCc----CHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTI----DENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~ 908 (1133)
....|++.+.||+|.||.||+++.+. |+.+|+|.+.+... +...+.+|+++|+++. |||||.+++.|+... ..
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~-~~ 111 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD-SV 111 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC-eE
Confidence 45578999999999999999998875 99999999975443 3468999999999998 999999999999875 45
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC----CceEEeccCc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD----FEAHLSEFGL 984 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~ 984 (1133)
++|||++.||.|.+.+.+. . +++.....++.||+.|++|||+.||+|||+||+|+|+... +.+|++|||+
T Consensus 112 ~lvmEL~~GGeLfd~i~~~-----~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK-----H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEEecCCchHHHHHHHc-----c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 9999999999999999875 1 8899999999999999999999999999999999999543 5799999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 985 DRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 985 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
+..... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||...........+... .+
T Consensus 186 a~~~~~----~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~----~~-- 255 (382)
T KOG0032|consen 186 AKFIKP----GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG----DF-- 255 (382)
T ss_pred ceEccC----CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC----CC--
Confidence 976533 33456678999999999999899999999999999999999999999887766655543332 11
Q ss_pred cccCCcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 LLEPGLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+....|+.+...+ +++.+|+..||.+|+++.+++++
T Consensus 256 ---------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 ---------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ---------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 22333444444444 88999999999999999999997
No 67
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.5e-36 Score=341.18 Aligned_cols=241 Identities=20% Similarity=0.319 Sum_probs=192.6
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
++||+|+||.||+|+.+ +|+.||+|++.... .....+.+|++++++++||||+++++++.... ..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD-RLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC-EEEEEEeCCCC
Confidence 46999999999999764 68999999986432 12346778999999999999999999988764 55999999999
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 997 (1133)
|+|.+++...+ .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 80 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---~~~ 151 (323)
T cd05571 80 GELFFHLSRER-----VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---GAT 151 (323)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC---CCc
Confidence 99999987643 3789999999999999999999999999999999999999999999999998643211 122
Q ss_pred CCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCC
Q 001171 998 STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPES 1077 (1133)
Q Consensus 998 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1077 (1133)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+.......+... ...+ +...
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--~~~~-----------p~~~ 218 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRF-----------PRTL 218 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCC-----------CCCC
Confidence 33457999999999999999999999999999999999999999766554444333221 1111 1110
Q ss_pred hhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1078 SEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1078 ~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
. ....+++.+|++.||++|| ++.|++++
T Consensus 219 ---~--~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 219 ---S--PEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred ---C--HHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 0 1123788899999999999 79998754
No 68
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.4e-35 Score=331.79 Aligned_cols=265 Identities=19% Similarity=0.284 Sum_probs=198.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|++.++||+|+||.||+|..+ ++..||+|++..... ....+.+|++++++++||||+++++++... ...++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE-RCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC-CeEEEEEe
Confidence 57999999999999999999775 688999999864322 245678899999999999999999998765 45689999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|++ |+|.+++...+ ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~-- 156 (288)
T cd07871 84 YLD-SDLKQYLDNCG----NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP-- 156 (288)
T ss_pred CCC-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC--
Confidence 996 58999887543 23788889999999999999999999999999999999999999999999998643221
Q ss_pred CCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc---cccccC-
Q 001171 994 EASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI---SELLEP- 1068 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 1068 (1133)
........+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+.+....... +.....
T Consensus 157 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 157 -TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred -CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 112234568899999999865 46899999999999999999999999776655554444433221110 000000
Q ss_pred CcCCCC--C-CChhHHH-----HHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1069 GLLELD--P-ESSEWEE-----FLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1069 ~~~~~~--~-~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+.... . ....... -....+++.+|++.||.+|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 0 0000000 0123489999999999999999999864
No 69
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.2e-36 Score=316.03 Aligned_cols=253 Identities=23% Similarity=0.360 Sum_probs=205.3
Q ss_pred cCCCcccccccccceeEEEEEECC-ceEEEEEEcccCCcC----HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
+.|++.+.||+|.-|+||.++.++ +..+|+|++.+.... ..+.+.|-+||+.++||.+..+++.++.+ ++.++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~-~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD-KYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc-ceeEEE
Confidence 457788999999999999998874 589999999654332 34677899999999999999999999876 566999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
||||+||+|..+.+++ .+..+++..++.++..|+.||+|||-.|||+|||||+||||.++|++.++||.++......
T Consensus 156 meyCpGGdL~~LrqkQ---p~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQ---PGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhC---CCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999999864 3567999999999999999999999999999999999999999999999999987433210
Q ss_pred C-------------------------------C-C---------------------CCCCCCCCCCCCccCccccCCCCC
Q 001171 992 P-------------------------------A-E---------------------ASSSTTPIGSLGYVSPEAASTGQP 1018 (1133)
Q Consensus 992 ~-------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~ 1018 (1133)
+ . . ..+....+||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 0 011234579999999999999999
Q ss_pred CCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHh-HhhhhccCCCC
Q 001171 1019 TKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLG-VKVGLLCTAPD 1097 (1133)
Q Consensus 1019 ~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~li~~Cl~~d 1097 (1133)
+.++|.|+|||++|||+.|..||.+.+..+....+... ...+++ . .++... .++|++.+.+|
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~--~l~Fp~-----------~----~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ--PLKFPE-----------E----PEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC--CCcCCC-----------C----CcchhHHHHHHHHHhccC
Confidence 99999999999999999999999888777666555432 111111 1 022222 38999999999
Q ss_pred CCCCCC----HHHHHHH
Q 001171 1098 PLDRPS----MADIVFM 1110 (1133)
Q Consensus 1098 P~~RPs----~~evl~~ 1110 (1133)
|.+|.. ++||.++
T Consensus 376 P~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRH 392 (459)
T ss_pred hhhhhccccchHHhhcC
Confidence 999987 8888754
No 70
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.2e-35 Score=329.69 Aligned_cols=259 Identities=23% Similarity=0.416 Sum_probs=204.2
Q ss_pred cCCCcccccccccceeEEEEEECC------ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQD------GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 908 (1133)
++|++.+.||+|+||.||+|.... ...||+|.+..... ..+.+.+|++++++++||||+++++++.... ..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ-PT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC-ce
Confidence 468899999999999999997642 26799999864332 2356889999999999999999999987654 45
Q ss_pred EEEEeccCCCCHHHHHHhhccCCC-----------CCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCce
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDG-----------HVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEA 977 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~-----------~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~ 977 (1133)
+++|||+++|+|.+++........ ..+++..+..++.|++.|++|||+.+|+||||||+||++++++.+
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcE
Confidence 899999999999999987533222 457888999999999999999999999999999999999999999
Q ss_pred EEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHH
Q 001171 978 HLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQ 1056 (1133)
Q Consensus 978 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~ 1056 (1133)
+|+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||......+....+.+.
T Consensus 164 ~L~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~ 242 (283)
T cd05048 164 KISDFGLSRDIYSADY-YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR 242 (283)
T ss_pred EECCCcceeecccccc-ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999875432211 112233456788999999988889999999999999999998 99999776665555444332
Q ss_pred hhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1057 LQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
...... . . .. ....+++.+||+.||.+||++.||+++|+.+
T Consensus 243 ----~~~~~~-~-------~---~~--~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 243 ----QLLPCP-E-------D---CP--ARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred ----CcCCCc-c-------c---CC--HHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 111110 0 0 00 1123788999999999999999999999863
No 71
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.5e-36 Score=341.70 Aligned_cols=244 Identities=20% Similarity=0.280 Sum_probs=197.0
Q ss_pred cCCCcccccccccceeEEEEEECC--ceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQD--GMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
++|++.++||+|+||.||+|.++. +..||+|++.... ...+.+.+|+++++.++||||+++++++... ...++
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~-~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE-SYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC-CEEEE
Confidence 468999999999999999997643 3689999985422 2245678899999999999999999999876 45599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++|+|.+++...+ .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK-----RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999998643 378889999999999999999999999999999999999999999999999875421
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+.......+.... ..+ +
T Consensus 184 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~----p--- 248 (340)
T PTZ00426 184 ------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI--IYF----P--- 248 (340)
T ss_pred ------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC--CCC----C---
Confidence 1234578999999999988889999999999999999999999997665544444332211 000 1
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
.... . ...+++.+|++.||++|+ +++|++++
T Consensus 249 ----~~~~---~--~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 249 ----KFLD---N--NCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ----CCCC---H--HHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1100 0 123788899999999995 89988865
No 72
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.7e-35 Score=341.60 Aligned_cols=263 Identities=20% Similarity=0.287 Sum_probs=201.6
Q ss_pred HhcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCc--CHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTI--DENTFRKEAEALGKVK-HRNLTVLRGYYAGPP 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~ 905 (1133)
..++|.+.++||+|+||.||+|.+. .+..||||++..... ..+.+.+|+++++++. ||||+++++++...
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~- 113 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS- 113 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC-
Confidence 4668999999999999999999753 235799999965332 2457889999999996 99999999999776
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccC-------------------------------------------------------
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQ------------------------------------------------------- 930 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 930 (1133)
...++||||+++|+|.+++......
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 4459999999999999998764210
Q ss_pred ------------------------------------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC
Q 001171 931 ------------------------------------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD 974 (1133)
Q Consensus 931 ------------------------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~ 974 (1133)
....+++..+..++.||++|++|||+.+|+||||||+||+++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~ 273 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG 273 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC
Confidence 01247788889999999999999999999999999999999999
Q ss_pred CceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhh-HHHH
Q 001171 975 FEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDED-IVKW 1052 (1133)
Q Consensus 975 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~-~~~~ 1052 (1133)
+.+|++|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||....... ....
T Consensus 274 ~~~kL~DfGla~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~ 352 (400)
T cd05105 274 KIVKICDFGLARDIMHDSN-YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNK 352 (400)
T ss_pred CEEEEEeCCcceecccccc-ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHH
Confidence 9999999999875432211 112233456788999999988889999999999999999997 999986543222 2222
Q ss_pred HHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1053 VKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
+.. +.... .. .. .. ....+++.+||+.||++||++.+|.+.|+++..
T Consensus 353 ~~~----~~~~~-~~-------~~---~~--~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 353 IKS----GYRMA-KP-------DH---AT--QEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred Hhc----CCCCC-CC-------cc---CC--HHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 211 10000 00 00 00 112378999999999999999999999997643
No 73
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.4e-35 Score=334.61 Aligned_cols=259 Identities=21% Similarity=0.352 Sum_probs=202.3
Q ss_pred cCCCcccccccccceeEEEEEEC-Cce----EEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGM----VLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
.+|++.+.||+|+||.||+|.+. +|+ .||+|++..... ..+.+.+|+.+++.++||||+++++++... ..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--TVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC--Cce
Confidence 46899999999999999999764 333 489999864332 246788999999999999999999998764 347
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+|+||+++|+|.+++.... ..+++..+..++.||+.||+|||+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeeecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999998643 237888899999999999999999999999999999999999999999999997653
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||......+....+..... . ..+
T Consensus 161 ~~~~-~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~---~~~ 233 (316)
T cd05108 161 ADEK-EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER---L---PQP 233 (316)
T ss_pred CCCc-ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCC---C---CCC
Confidence 2211 111122334678999999999999999999999999999998 9999976555444332221100 0 000
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCC
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPD 1119 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~ 1119 (1133)
. ... ....+++.+||+.+|++||++.+++..+..+...+.
T Consensus 234 ~-----~~~------~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 234 P-----ICT------IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred C-----CCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 0 001 112378889999999999999999999988776553
No 74
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.4e-35 Score=340.36 Aligned_cols=266 Identities=22% Similarity=0.376 Sum_probs=195.8
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC----CcEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPP----DVRL 909 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~~ 909 (1133)
+|++.++||+|+||.||+|... +|+.||||++.... .....+.+|++++++++||||+++++++.... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5889999999999999999765 68999999986422 22456889999999999999999999885432 2358
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||+ +++|.+++.... .+++..+..++.||++||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELM-ESDLHQVIKAND-----DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecC-CCCHHHHHHhcc-----cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 999999 478999887532 38899999999999999999999999999999999999999999999999987543
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCC--CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc------
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAAST--GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ------ 1061 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~------ 1061 (1133)
.............|++.|+|||++.+ ..++.++||||+||++|||++|+.||...+.......+........
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 22222222234579999999999865 5789999999999999999999999976554333322222111100
Q ss_pred -----ccccccCCcCCCCCC--ChhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1062 -----ISELLEPGLLELDPE--SSEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1062 -----~~~~~~~~~~~~~~~--~~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
..+.... +....+. ...+... ....+++.+|++.||++||+++|++++
T Consensus 235 i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 235 VRNEKARRYLSS-MRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhhhHHHHHHh-hcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000 0000000 0000000 112378999999999999999999965
No 75
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.4e-35 Score=322.85 Aligned_cols=251 Identities=23% Similarity=0.384 Sum_probs=201.5
Q ss_pred CCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 838 QFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
+|++.+.||+|+||.||+|.++.+..+|+|.+.......+.+.+|++++++++||||+++++++... ...++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ-RPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC-CceEEEEecCCC
Confidence 5788999999999999999888778899999876665667889999999999999999999998766 455999999999
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 997 (1133)
++|.+++.... ..+++..+..++.|++.|++|||+.||+||||||+||+++.++.+|++|||+++....... ..
T Consensus 84 ~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--~~ 157 (256)
T cd05059 84 GCLLNYLRERK----GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--TS 157 (256)
T ss_pred CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc--cc
Confidence 99999997543 2478999999999999999999999999999999999999999999999999875432111 11
Q ss_pred CCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 998 STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 998 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+....+...... . ... ..
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----~-~~~------~~ 226 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL----Y-RPK------LA 226 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC----C-CCC------CC
Confidence 112234457999999998899999999999999999999 89999766555544433221100 0 000 00
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
. ....+++.+||..+|++||++.|+++.|.
T Consensus 227 ~------~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 227 P------TEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred C------HHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 0 11237899999999999999999998863
No 76
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.7e-35 Score=329.66 Aligned_cols=266 Identities=20% Similarity=0.256 Sum_probs=197.1
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
++|++.+.||+|+||.||+|+++ +++.||+|++..... ..+.+.+|++++++++||||+++++++... +..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR-GKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC-CEEEEEE
Confidence 36899999999999999999886 588999999865432 245678999999999999999999998775 4559999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||++++.+..+... ...+++..+..++.||+.||+|||+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 80 e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 80 EYVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred ecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 99988776654432 1247888999999999999999999999999999999999999999999999987542211
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhh------------c
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQR------------G 1060 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~------------~ 1060 (1133)
........|++.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+...... .
T Consensus 155 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 155 --NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred --cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 11223456899999999998888999999999999999999999999765544333222221110 0
Q ss_pred cccccccCCcCCCCCCChh-HHHHH-HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1061 QISELLEPGLLELDPESSE-WEEFL-LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.......+........... ..... ...+++.+|++.||++||+++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000000000000 00011 23389999999999999999999863
No 77
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.6e-35 Score=324.12 Aligned_cols=255 Identities=22% Similarity=0.393 Sum_probs=203.2
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.+|++.+.||+|+||.||+|.++ .++.||+|++.......+.+.+|++++++++|||++++++++.... ..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCC-CcEEEEEeC
Confidence 45788899999999999999765 5889999998766555678899999999999999999999987764 448999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++.... ...+++..+..++.|+++|++|||+.|++||||||+||++++++.+|++|||+++.......
T Consensus 85 ~~~~L~~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-- 159 (263)
T cd05052 85 TYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-- 159 (263)
T ss_pred CCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee--
Confidence 9999999997643 23488999999999999999999999999999999999999999999999999865432111
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.....++....+..... ... +
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---------~~~---~ 227 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---------MER---P 227 (263)
T ss_pred eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC---------CCC---C
Confidence 11112234568999999988889999999999999999998 9999976555444333322110 000 0
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
... . ....+++.+||+.||++||++.|+++.|+.+
T Consensus 228 ~~~---~--~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 228 EGC---P--PKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCC---C--HHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 000 0 1123789999999999999999999999864
No 78
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.3e-35 Score=339.78 Aligned_cols=247 Identities=21% Similarity=0.353 Sum_probs=188.1
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|+..++||+|+||.||+|.+. +|+.||||++...... .+.+.+|++++++++|+||+++++++.... ..++|||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e 152 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG-EIQVLLE 152 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC-eEEEEEe
Confidence 35677889999999999999775 6899999998643322 457889999999999999999999997764 4589999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++|+|.+.. ...+..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 153 ~~~~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~- 222 (353)
T PLN00034 153 FMDGGSLEGTH---------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM- 222 (353)
T ss_pred cCCCCcccccc---------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence 99999986422 24567778899999999999999999999999999999999999999999987543211
Q ss_pred CCCCCCCCCCCCCccCccccCC-----CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 994 EASSSTTPIGSLGYVSPEAAST-----GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||......+....+..... ...... ..
T Consensus 223 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~-~~ 298 (353)
T PLN00034 223 --DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM-SQPPEA-PA 298 (353)
T ss_pred --ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc-cCCCCC-CC
Confidence 12234578999999998743 2345689999999999999999999974333332222221111 100000 00
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... ....+++.+||+.||++||++.|++++
T Consensus 299 ------~~~------~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 299 ------TAS------REFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------ccC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 112378889999999999999999987
No 79
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.5e-35 Score=335.26 Aligned_cols=239 Identities=20% Similarity=0.331 Sum_probs=189.1
Q ss_pred cccccceeEEEEEEC-CceEEEEEEcccC----CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCC
Q 001171 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDG----TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGN 919 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gs 919 (1133)
||+|+||.||+|.+. +++.||+|++... ......+.+|++++++++||||+++++++... ...++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP-EKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC-CeEEEEEcCCCCCc
Confidence 799999999999775 5889999998642 22245678899999999999999999998876 45599999999999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCC
Q 001171 920 LATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999 (1133)
Q Consensus 920 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 999 (1133)
|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||+++..... .....
T Consensus 80 L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~---~~~~~ 151 (312)
T cd05585 80 LFHHLQREG-----RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD---DDKTN 151 (312)
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC---CCccc
Confidence 999997643 3788999999999999999999999999999999999999999999999998643221 12233
Q ss_pred CCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1000 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...........+.. ... .++...
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~----~~~---------~~~~~~-- 216 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ----EPL---------RFPDGF-- 216 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc----CCC---------CCCCcC--
Confidence 45799999999999998999999999999999999999999976555443333221 100 000000
Q ss_pred HHHHHHhHhhhhccCCCCCCCCCC---HHHHHHH
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRPS---MADIVFM 1110 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RPs---~~evl~~ 1110 (1133)
. ....+++.+||+.||++||+ +.|++.+
T Consensus 217 -~--~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 217 -D--RDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred -C--HHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 0 11227888999999999975 5666643
No 80
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.6e-35 Score=327.44 Aligned_cols=259 Identities=24% Similarity=0.398 Sum_probs=204.9
Q ss_pred hcCCCcccccccccceeEEEEEECC------ceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD------GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 907 (1133)
.++|.+.+.||+|+||.||+|.+.+ ++.||+|.+...... .+.+.+|++++++++||||+++++++... ..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG-DP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC-CC
Confidence 3468889999999999999997643 478999998754433 46889999999999999999999999876 45
Q ss_pred EEEEEeccCCCCHHHHHHhhcc---------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceE
Q 001171 908 RLLVYDYMPNGNLATLLQEASH---------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 978 (1133)
.++||||+++++|.+++...+. .....+++..+..++.|++.|++|||++|++||||||+||+++.++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k 162 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK 162 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence 6999999999999999986532 1224478889999999999999999999999999999999999999999
Q ss_pred EeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHh
Q 001171 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQL 1057 (1133)
Q Consensus 979 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~ 1057 (1133)
++|||+++....... ........+++.|+|||++.+..++.++||||+||++|||++ |..||......+..+.+...
T Consensus 163 l~d~g~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~- 240 (280)
T cd05049 163 IGDFGMSRDVYTTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG- 240 (280)
T ss_pred ECCcccceecccCcc-eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-
Confidence 999999865422211 111223346788999999999999999999999999999998 99999766665555444321
Q ss_pred hhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1058 QRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
..... ... .. ....+++.+||+.||++||++.||++.|++
T Consensus 241 ---~~~~~-~~~------~~------~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 241 ---RLLQR-PRT------CP------SEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred ---CcCCC-CCC------CC------HHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 11110 000 00 112378999999999999999999999863
No 81
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.2e-35 Score=328.67 Aligned_cols=263 Identities=24% Similarity=0.311 Sum_probs=197.1
Q ss_pred cCCCcccccccccceeEEEEEEC--CceEEEEEEcccCCc---CHHHHHHHHHHHhhc---cCCCeeeEEEEEeC----C
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ--DGMVLSIRRLRDGTI---DENTFRKEAEALGKV---KHRNLTVLRGYYAG----P 904 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l---~hpniv~l~~~~~~----~ 904 (1133)
++|++.+.||+|+||.||+|++. +|+.||+|++..... ....+.+|+++++++ +||||+++++++.. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 37899999999999999999763 478899999864322 234566788887766 69999999998852 2
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCc
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGL 984 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 984 (1133)
....++||||++ ++|.+++..... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+|++|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 345689999995 689999876432 3478999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc---
Q 001171 985 DRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ--- 1061 (1133)
Q Consensus 985 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~--- 1061 (1133)
++..... .......|++.|+|||++.+..++.++||||+||++|||++|++||....+.+....+........
T Consensus 157 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 157 ARIYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 232 (290)
T ss_pred eEeccCC----cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 8654221 223345689999999999888899999999999999999999999987766655555544322110
Q ss_pred ccccc---cCCcCCCCCCChhHHHH-----HHhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1062 ISELL---EPGLLELDPESSEWEEF-----LLGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1062 ~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
.+... ...+... .....+.. ....+++.+|++.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 233 WPRDVALPRQAFHSK--SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred chhhhcccchhccCC--CCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000 0000000 00001111 11227899999999999999999985
No 82
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5e-35 Score=321.77 Aligned_cols=247 Identities=20% Similarity=0.320 Sum_probs=194.9
Q ss_pred ccccccceeEEEEEEC---CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 844 VLSRGRYGLIFKASYQ---DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 844 ~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
.||+|+||.||+|.++ ++..+|+|++.....+ .+.+.+|+.++++++||||+++++++.. +..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA--ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCcEEEEecCCC
Confidence 5899999999999653 5789999998654332 3578899999999999999999998864 345899999999
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 997 (1133)
|+|.+++.... .+++..+..++.|++.|++|+|++||+||||||+||+++.++.++++|||+++...........
T Consensus 80 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 80 GPLNKFLQKNK-----HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 99999997532 3788999999999999999999999999999999999999999999999998755332221111
Q ss_pred CCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 998 STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 998 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
.....++..|+|||.+....++.++|||||||++|||++ |+.||......+....+.+. ...... . ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~----~~~~~~-~------~~ 223 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG----ERMECP-Q------RC 223 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC----CCCCCC-C------CC
Confidence 222344678999999988888999999999999999998 99999766655544443321 111100 0 00
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
. ....+++.+||+.||++||++.+|++.|+++
T Consensus 224 ~------~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 224 P------PEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred C------HHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 0 1123789999999999999999999999875
No 83
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.7e-35 Score=334.07 Aligned_cols=204 Identities=23% Similarity=0.405 Sum_probs=174.3
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.++|++.+.||+|+||.||+|++. +|..||+|.+..... ..+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-EEEEEe
Confidence 357999999999999999999775 588999999865322 2357889999999999999999999987764 459999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC-CceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
||+++|+|.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||+++....
T Consensus 83 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 156 (331)
T cd06649 83 EHMDGGSLDQVLKEAK-----RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (331)
T ss_pred ecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-
Confidence 9999999999997643 378889999999999999999986 699999999999999999999999999865422
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHH
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~ 1050 (1133)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||...+..++.
T Consensus 157 ----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~ 211 (331)
T cd06649 157 ----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELE 211 (331)
T ss_pred ----cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 1223456899999999999889999999999999999999999999765554443
No 84
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6e-35 Score=321.75 Aligned_cols=254 Identities=23% Similarity=0.402 Sum_probs=206.3
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.++|++.++||+|+||.||+|..++++.||+|.+.......+.+.+|++++++++|||++++++++.. ...++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ--EPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEcc--CCcEEEEEcC
Confidence 45789999999999999999998889999999998777677889999999999999999999998754 3458999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++.... +..+++..+..++.|++.|++|||+.|++||||||+||+++.++.++++|||.+....... .
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~ 157 (260)
T cd05067 83 ENGSLVDFLKTPE---GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE--Y 157 (260)
T ss_pred CCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC--c
Confidence 9999999987543 2348899999999999999999999999999999999999999999999999986543211 1
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......++..|+|||++.+..++.++||||||+++||+++ |+.||......+....+...... ...+
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~------- 226 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM----PRPD------- 226 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC----CCCC-------
Confidence 11223345678999999988889999999999999999999 99999766655544443221110 0000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
... ....+++.+|++.+|++||+++++++.|+.
T Consensus 227 ~~~------~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 227 NCP------EELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCC------HHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 000 112378999999999999999999999986
No 85
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=365.38 Aligned_cols=483 Identities=26% Similarity=0.330 Sum_probs=342.7
Q ss_pred EccCCcCCCCCCCCCCCCCcCcEEeccCCcCCCCCc-ccccCccccceEecccccccCCCCccccCccccceeecccccc
Q 001171 171 DLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVP-ASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVL 249 (1133)
Q Consensus 171 ~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l 249 (1133)
|+|..+++ .||..+.+-..++.|++..|-+-. .| +.+....+|+.|+|++|++. ..|..+..+++|+.|+++.|.|
T Consensus 4 d~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~-~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 4 DASDEQLE-LIPEQILNNEALQILNLRRNSLLS-RPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred ccccccCc-ccchhhccHHHHHhhhcccccccc-CchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 34444443 344433333345555555555442 22 22233334666666666654 5555555566666666666665
Q ss_pred CCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCccccccEEeccCCcccc
Q 001171 250 KGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRA 329 (1133)
Q Consensus 250 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~ 329 (1133)
.. .|...+.+.+|++|.|..|++. ..|.++ ..+.+|++|++++|.|. .
T Consensus 81 ~~-vp~s~~~~~~l~~lnL~~n~l~-~lP~~~-----~~lknl~~LdlS~N~f~-------------------------~ 128 (1081)
T KOG0618|consen 81 RS-VPSSCSNMRNLQYLNLKNNRLQ-SLPASI-----SELKNLQYLDLSFNHFG-------------------------P 128 (1081)
T ss_pred hh-Cchhhhhhhcchhheeccchhh-cCchhH-----HhhhcccccccchhccC-------------------------C
Confidence 53 3455555666666666666554 234333 33444444444444443 2
Q ss_pred cCCchhhcccccceeeccCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcccccCCCccCC
Q 001171 330 VFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGG 409 (1133)
Q Consensus 330 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 409 (1133)
+ |..+..++.++.++.++|... ..++... ++.++|..|.+.+.++..+..+.. .|||.+|.+. -..+.+
T Consensus 129 ~-Pl~i~~lt~~~~~~~s~N~~~----~~lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~ 197 (1081)
T KOG0618|consen 129 I-PLVIEVLTAEEELAASNNEKI----QRLGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSN 197 (1081)
T ss_pred C-chhHHhhhHHHHHhhhcchhh----hhhcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhh
Confidence 2 455566666666666666211 1122222 666777777776666666666555 5777777765 234556
Q ss_pred CCCCcEEEccCCcCccccCccccCccccceeecccccccccCChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEE
Q 001171 410 IRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLN 489 (1133)
Q Consensus 410 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 489 (1133)
++.|+.|....|+++...- .-++|+.|+.++|.++...+ -..-.+|+++++++|+++ .+|.+++.+.+|+.++
T Consensus 198 ~~~l~~l~c~rn~ls~l~~----~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~ 270 (1081)
T KOG0618|consen 198 LANLEVLHCERNQLSELEI----SGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALN 270 (1081)
T ss_pred ccchhhhhhhhcccceEEe----cCcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEec
Confidence 6777777777777764322 34789999999999883322 233568999999999999 5669999999999999
Q ss_pred cccCCCccccCCCcCCcccccEEeccccCCCCCCChhccCCCCCcEeeccCCcccccCCCCCCCCcc-CcEEEccccccc
Q 001171 490 LSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVG-LQYLNLSDNAFT 568 (1133)
Q Consensus 490 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~ 568 (1133)
..+|++. .+|..+...++|+.|++..|.++ -+|....++++|++|+|..|+|...++..|.-+.. |..|+.+.|++.
T Consensus 271 ~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~ 348 (1081)
T KOG0618|consen 271 ANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS 348 (1081)
T ss_pred ccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc
Confidence 9999995 78888899999999999999998 67888888999999999999998544444444444 888999999998
Q ss_pred CCCCcccccccccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCchhhh
Q 001171 569 GDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEIS 648 (1133)
Q Consensus 569 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 648 (1133)
......-..++.|+.|++.+|.+++..-+.+..+..|+.|+|++|+|.......+.++..|++|+||+|+++ .+|.++.
T Consensus 349 ~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva 427 (1081)
T KOG0618|consen 349 TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVA 427 (1081)
T ss_pred ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHH
Confidence 544333335678999999999999988888899999999999999998544556889999999999999999 8999999
Q ss_pred ccCCCcEEEeecCCCCccCCccccCcccccccccccccccccCCccccccccCcccccccccc
Q 001171 649 KCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNNL 711 (1133)
Q Consensus 649 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l 711 (1133)
++..|+.|...+|++. ..| .+.+++.|+.+|+|.|+|+...-+.....++|++|||++|..
T Consensus 428 ~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 428 NLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 9999999999999999 677 889999999999999999854444434448999999999984
No 86
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.9e-35 Score=335.89 Aligned_cols=241 Identities=21% Similarity=0.323 Sum_probs=192.1
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
++||+|+||.||+++.+ +|..||+|++.... .....+.+|++++++++||||+++++++.... ..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD-RLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-EEEEEEeCCCC
Confidence 46999999999999764 68999999986432 12345678999999999999999999988764 55999999999
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 997 (1133)
|+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 80 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~---~~~ 151 (323)
T cd05595 80 GELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GAT 151 (323)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC---CCc
Confidence 99999887643 3789999999999999999999999999999999999999999999999998643221 112
Q ss_pred CCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCC
Q 001171 998 STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPES 1077 (1133)
Q Consensus 998 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1077 (1133)
.....|++.|+|||++.+..++.++||||+||++|||++|+.||...+.......+... ...++ ...
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~p-----------~~~ 218 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--EIRFP-----------RTL 218 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCC-----------CCC
Confidence 23456999999999999889999999999999999999999999766555444333221 11111 110
Q ss_pred hhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1078 SEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1078 ~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
. ....+++.+|++.||++|| ++.+++++
T Consensus 219 ~-----~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 219 S-----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred C-----HHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 0 0112788899999999998 88888764
No 87
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.9e-35 Score=324.49 Aligned_cols=256 Identities=25% Similarity=0.416 Sum_probs=207.4
Q ss_pred HhcCCCcccccccccceeEEEEEECCceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
...+|++.++||+|+||.||+|...++..+|+|.+..... ....+.+|++++++++||||+++++++.... ..++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE-PVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC-CeEEEEe
Confidence 3457899999999999999999988899999999876544 4567899999999999999999999988764 4599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++.... ...+++..+..++.||+.|++|||+.||+||||||+||+++.++.+|++|||.+.......
T Consensus 83 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~- 158 (261)
T cd05148 83 LMEKGSLLAFLRSPE---GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV- 158 (261)
T ss_pred ecccCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc-
Confidence 999999999997643 2347899999999999999999999999999999999999999999999999986542211
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.......++..|+|||++.+..++.++||||||+++|+|++ |+.||......+....+....... .. .
T Consensus 159 --~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~---~- 227 (261)
T cd05148 159 --YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMP-----CP---A- 227 (261)
T ss_pred --ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCC-----CC---C-
Confidence 11223346678999999988889999999999999999998 899997766555555443221100 00 0
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
... ....+++.+||+.||.+||++.++++.|+.+
T Consensus 228 --~~~------~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 228 --KCP------QEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred --CCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 000 1123788999999999999999999999864
No 88
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.5e-36 Score=327.43 Aligned_cols=249 Identities=29% Similarity=0.511 Sum_probs=191.1
Q ss_pred cccccccccceeEEEEEEC-----CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 841 EENVLSRGRYGLIFKASYQ-----DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 841 ~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+.+.||+|.||.||+|.++ .+..|+||.+..... ..+.+.+|++.+++++||||++++|++..... .++|||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~-~~lv~e 81 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEP-LFLVME 81 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSS-EEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccc-cccccc
Confidence 4678999999999999876 368899999965332 24789999999999999999999999995544 589999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++|+|.+++.... ...+++..+..++.|||+||+|||+++++|+||+++||+++.++.+||+|||+++......
T Consensus 82 ~~~~g~L~~~L~~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~- 157 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKN---KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS- 157 (259)
T ss_dssp --TTEBHHHHHHHTC---TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS-
T ss_pred ccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 999999999999852 2348999999999999999999999999999999999999999999999999986542111
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.........+...|+|||.+....++.++||||||+++||+++ |+.||......+....+.+..+ ...+..++
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~----- 231 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-LPIPDNCP----- 231 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE-TTSBTTSB-----
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ceeccchh-----
Confidence 1122233456778999999988889999999999999999999 7899977666665555432211 11111000
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
. ...+++.+||+.||++||++.|+++.|
T Consensus 232 ---------~--~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 232 ---------K--DIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---------H--HHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---------H--HHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1 112688899999999999999999886
No 89
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.3e-35 Score=321.10 Aligned_cols=254 Identities=24% Similarity=0.478 Sum_probs=204.3
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.++|++.++||+|+||.||+|...++..||+|.+.......+.+.+|++++++++||+++++++++.. ...++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE--EPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC--CCcEEEEEec
Confidence 35789999999999999999988888889999998766667889999999999999999999998854 3358999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.++++... ...+++..+..++.+++.|++|||+.+|+||||||+||++++++.++++|||.+........
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 83 SKGSLLDFLKDGE---GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 9999999997632 23478999999999999999999999999999999999999999999999999865432211
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......++..|+|||+..+..++.++||||||+++|||++ |..||......+....+..... . . .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~-~-----~---- 224 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR---M-P-----C---- 224 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---C-C-----C----
Confidence 11122345668999999988889999999999999999999 8999976555544443322110 0 0 0
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
+. ... ....+++.+|+..+|++||++.++.+.|+.
T Consensus 225 ~~--~~~--~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 PQ--DCP--ISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CC--cCC--HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00 000 112378999999999999999999999875
No 90
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.4e-35 Score=335.59 Aligned_cols=241 Identities=21% Similarity=0.322 Sum_probs=191.9
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
++||+|+||.||+++.+ +|+.||+|++.... .....+.+|+++++.++||||+++++++... +..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK-DRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC-CEEEEEEeCCCC
Confidence 46999999999999765 68999999986432 2235678899999999999999999998876 455999999999
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 997 (1133)
|+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 80 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---~~~ 151 (328)
T cd05593 80 GELFFHLSRER-----VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---AAT 151 (328)
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc---ccc
Confidence 99999887633 3789999999999999999999999999999999999999999999999998643211 112
Q ss_pred CCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCC
Q 001171 998 STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPES 1077 (1133)
Q Consensus 998 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1077 (1133)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...+.......+... ...+ +...
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~--~~~~-----------p~~~ 218 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--DIKF-----------PRTL 218 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC--CccC-----------CCCC
Confidence 23457999999999999889999999999999999999999999765554433322110 0000 1110
Q ss_pred hhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1078 SEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1078 ~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
. ....+++.+|++.||++|| ++.|++++
T Consensus 219 ~-----~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 219 S-----ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred C-----HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0 0123788899999999997 89999865
No 91
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=8e-35 Score=320.99 Aligned_cols=255 Identities=25% Similarity=0.434 Sum_probs=203.3
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.++|++.++||+|+||.||+|.+.++..||+|++.......+.+.+|++++++++||||+++++++.. ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC--CCcEEEEEcC
Confidence 35699999999999999999988777789999998766666789999999999999999999998754 3358999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++|+|.+++.... ...+++..+..++.|++.||+|+|+.+|+||||||+||+++.++.++++|||.++.......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-- 157 (262)
T cd05071 83 SKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 157 (262)
T ss_pred CCCcHHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc--
Confidence 9999999997532 23478999999999999999999999999999999999999999999999999865432211
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......++..|+|||+..+..++.++|||||||++|||++ |..||...........+.... . .....
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~---~--~~~~~------ 226 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---R--MPCPP------ 226 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC---C--CCCcc------
Confidence 11123346678999999988889999999999999999999 888887655444333221110 0 00000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
... ....+++.+|++.||++||++.++++.|+..
T Consensus 227 ----~~~--~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 227 ----ECP--ESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ----ccC--HHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 000 1123799999999999999999999999874
No 92
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-34 Score=320.78 Aligned_cols=255 Identities=25% Similarity=0.435 Sum_probs=202.3
Q ss_pred cCCCcccccccccceeEEEEEECC----ceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
++|++.+.||+|+||.||+|.++. ...||||.+...... ...+.+|++++++++||||+++++++.... ..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR-PVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC-ceEE
Confidence 468899999999999999998742 467999998654332 357889999999999999999999987764 4599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++++|.+++.... ..+++..+..++.|++.|++|||+++|+||||||+||++++++.++++|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999997643 2488999999999999999999999999999999999999999999999999976531
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
... ........++..|+|||.+.+..++.++||||||+++|||++ |..||...........+.+..... .+
T Consensus 159 ~~~-~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------~~- 230 (266)
T cd05033 159 SEA-TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP------PP- 230 (266)
T ss_pred ccc-ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC------CC-
Confidence 111 111222345678999999988889999999999999999998 999997665555444433211100 00
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
. ... ....+++.+|++.+|++||++.||+++|+++
T Consensus 231 -~---~~~------~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 231 -M---DCP------SALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -C---CCC------HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 000 1123789999999999999999999999874
No 93
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-36 Score=325.65 Aligned_cols=264 Identities=22% Similarity=0.378 Sum_probs=218.0
Q ss_pred HHHHHHhcCCCcccccccccceeEEEEEECC-ceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcE
Q 001171 830 VETLEATRQFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 830 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 908 (1133)
..+.....+.+..++||-|.||.||.|.|+. .-.||||.++.+....++|..|+.+|+.++|||+|+++|+|.....+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF- 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF- 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe-
Confidence 3444555677788999999999999999875 67899999999888899999999999999999999999999876555
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
|||+|||..|+|.+|+++..+. .++....+.++-||+.||+||..+++|||||.++|.|+.++..+||+|||++|+.
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~---ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRS---EVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred EEEEecccCccHHHHHHHhchh---hcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 9999999999999999986543 3677778889999999999999999999999999999999999999999999875
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
-. +.........-.+.|.|||-+.-..++.|+|||+|||++||+.| |-.||.+.+-.+++..+.+.++..+
T Consensus 416 tg--DTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~------ 487 (1157)
T KOG4278|consen 416 TG--DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDG------ 487 (1157)
T ss_pred cC--CceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccC------
Confidence 32 22222233344568999999988889999999999999999999 8899988777776666665543221
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
++.+...- .++++.||+..|.+||+++|+-+.+|..-.
T Consensus 488 -------PeGCPpkV----YeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 488 -------PEGCPPKV----YELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred -------CCCCCHHH----HHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 12221111 278889999999999999999998887543
No 94
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=330.64 Aligned_cols=266 Identities=21% Similarity=0.360 Sum_probs=213.6
Q ss_pred CCCcccccccccceeEEEEEECC--c--eEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQD--G--MVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
+....+.||+|.||+|++|.|.. | ..||||.++.+... .++|.+|+.+|.+|+|||++++||++.+. ...+|
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q--p~mMV 188 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ--PAMMV 188 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc--hhhHH
Confidence 34567889999999999998863 4 46899999876544 57899999999999999999999999873 34799
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
||.++.|+|.+.+++.. ...+.......++.|||.||.||.+++.|||||.++|+++.....+||+|||+.|.....
T Consensus 189 ~ELaplGSLldrLrka~---~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKAK---KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhhcccchHHHHHhhcc---ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999999999832 244777888899999999999999999999999999999999999999999999877655
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
.+.+.......-...|+|||.+..+.++.++|||+|||++||||+ |+.||.+.....+.+.+.+..+-.
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLp---------- 335 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLP---------- 335 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCC----------
Confidence 554444445566778999999999999999999999999999999 899998888777766655321110
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCCCCCCC
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDMPSSAD 1125 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~~~~~~ 1125 (1133)
. +.. +.+. ..+++..||..+|++||++..|.+.+-..+..+.......
T Consensus 336 -R--Pk~--csed--IY~imk~cWah~paDRptFsair~~~~l~eaqp~~a~~~~ 383 (1039)
T KOG0199|consen 336 -R--PKY--CSED--IYQIMKNCWAHNPADRPTFSAIREDLVLAEAQPAVARETY 383 (1039)
T ss_pred -C--CCC--ChHH--HHHHHHHhccCCccccccHHHHHHhHHHHhcCCceeeeec
Confidence 1 111 1111 1278899999999999999999866655555544444333
No 95
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.2e-35 Score=333.24 Aligned_cols=241 Identities=23% Similarity=0.364 Sum_probs=190.7
Q ss_pred cccccccceeEEEEEE----CCceEEEEEEcccCC-----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 843 NVLSRGRYGLIFKASY----QDGMVLSIRRLRDGT-----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++||+|+||.||+++. ..++.||+|.+.... .....+.+|++++++++||||+++++++.... ..++|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG-KLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC-eEEEEEe
Confidence 5799999999999975 357899999986432 12345778999999999999999999988764 5599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++|+|.+++...+ .+.+..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 154 (323)
T cd05584 81 YLSGGELFMHLEREG-----IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG- 154 (323)
T ss_pred CCCCchHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-
Confidence 999999999997643 36778888899999999999999999999999999999999999999999986432211
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||...+.......+.+. .. ..
T Consensus 155 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~----~~---------~~ 219 (323)
T cd05584 155 --TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG----KL---------NL 219 (323)
T ss_pred --CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC----CC---------CC
Confidence 1223456899999999998888999999999999999999999999765554433332221 10 00
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
+.... ....+++.+|++.||++|| ++.+++++
T Consensus 220 ~~~~~-----~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 220 PPYLT-----PEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCCCC-----HHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 11100 0123788999999999999 78888764
No 96
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.5e-35 Score=341.67 Aligned_cols=253 Identities=23% Similarity=0.335 Sum_probs=193.3
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.|++.+.||+|+||+||+|++. +++.||+|++..... ..+.+.+|++++++++||||+++++++.+.. ..++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~-~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-NLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC-EEEEEE
Confidence 5888999999999999999764 588999999965321 2356789999999999999999999998764 569999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++|+|.+++.+.. .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~-----~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 81 DYIPGGDMMSLLIRME-----VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred ecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 9999999999997643 37888888999999999999999999999999999999999999999999975321100
Q ss_pred CC--------------------------------------------CCCCCCCCCCCCccCccccCCCCCCCCCchhHHH
Q 001171 993 AE--------------------------------------------ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFG 1028 (1133)
Q Consensus 993 ~~--------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG 1028 (1133)
.. .......+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 00 0001235799999999999888899999999999
Q ss_pred HHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhc--cCCCCCCCCCCHHH
Q 001171 1029 IVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLL--CTAPDPLDRPSMAD 1106 (1133)
Q Consensus 1029 ~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~--Cl~~dP~~RPs~~e 1106 (1133)
|++|||++|+.||......+....+........+ +... .... .+.+++.+ |+..+|..||++.|
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-----~~~~---~~s~------~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVINWENTLHI-----PPQV---KLSP------EAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHccccccCC-----CCCC---CCCH------HHHHHHHHHccCcccccCCCCHHH
Confidence 9999999999999765554433322211000000 0000 0011 12255655 66677777999999
Q ss_pred HHHH
Q 001171 1107 IVFM 1110 (1133)
Q Consensus 1107 vl~~ 1110 (1133)
++++
T Consensus 302 ~l~h 305 (381)
T cd05626 302 IKAH 305 (381)
T ss_pred HhcC
Confidence 9976
No 97
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.6e-35 Score=337.83 Aligned_cols=211 Identities=23% Similarity=0.370 Sum_probs=176.5
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.++||+|+||+||+|... +++.||+|++.... .....+.+|++++.+++||+|+++++.+.+.. ..++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~-~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL-NLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-eEEEE
Confidence 46899999999999999999765 58999999986432 12356788999999999999999999998764 45999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++.+.+ .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~E~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 80 MEFLPGGDMMTLLMKKD-----TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred EcCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 99999999999998643 3789999999999999999999999999999999999999999999999998654221
Q ss_pred CCC--------------------------------CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCC
Q 001171 992 PAE--------------------------------ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRK 1039 (1133)
Q Consensus 992 ~~~--------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~ 1039 (1133)
... .......+||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 100 000123579999999999998899999999999999999999999
Q ss_pred CCccCChhhHHHHH
Q 001171 1040 PVMFTQDEDIVKWV 1053 (1133)
Q Consensus 1040 Pf~~~~~~~~~~~~ 1053 (1133)
||......+....+
T Consensus 235 Pf~~~~~~~~~~~i 248 (363)
T cd05628 235 PFCSETPQETYKKV 248 (363)
T ss_pred CCCCCCHHHHHHHH
Confidence 99766655544443
No 98
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=9.2e-35 Score=327.84 Aligned_cols=266 Identities=20% Similarity=0.320 Sum_probs=195.0
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.++|++.+.||+|+||.||+|+.+ +++.||+|++..... ....+.+|++++++++||||+++++++.... ..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE-TLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC-eEEEEE
Confidence 467999999999999999999876 689999999864332 2346778999999999999999999998764 559999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||++ +++.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~- 156 (303)
T cd07869 83 EYVH-TDLCQYMDKHP----GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP- 156 (303)
T ss_pred ECCC-cCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC-
Confidence 9995 68888876532 23788889999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCCh-hhHHHHHHHHhhhcc---c-----
Q 001171 993 AEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQD-EDIVKWVKKQLQRGQ---I----- 1062 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~-~~~~~~~~~~~~~~~---~----- 1062 (1133)
........|++.|+|||++.+ ..++.++||||+||++|||++|+.||....+ .+....+........ .
T Consensus 157 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 157 --SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred --CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 122234568899999999865 4578899999999999999999999975432 222222222111110 0
Q ss_pred -cccccCCcCCCCCCC--hhHHH---HHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1063 -SELLEPGLLELDPES--SEWEE---FLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1063 -~~~~~~~~~~~~~~~--~~~~~---~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.......+....+.. ..+.. .....+++.+|++.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 000000000000000 00000 0122379999999999999999999863
No 99
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-34 Score=324.04 Aligned_cols=258 Identities=22% Similarity=0.379 Sum_probs=200.5
Q ss_pred cCCCcccccccccceeEEEEEE-----CCceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
.+|++.+.||+|+||.||+|.+ ..+..||+|.+...... .+.+.+|++++++++||||+++++++.... ..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ-PVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC-ceE
Confidence 4678889999999999999974 24688999999753322 256889999999999999999999988764 459
Q ss_pred EEEeccCCCCHHHHHHhhccC------------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCce
Q 001171 910 LVYDYMPNGNLATLLQEASHQ------------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEA 977 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~ 977 (1133)
+||||+++++|.+++...... ....+++.....++.|++.|++|||++||+||||||+||++++++.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~ 163 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHV 163 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcE
Confidence 999999999999998643210 12347888899999999999999999999999999999999999999
Q ss_pred EEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHH
Q 001171 978 HLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQ 1056 (1133)
Q Consensus 978 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~ 1056 (1133)
|++|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||...........+...
T Consensus 164 kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 242 (283)
T cd05090 164 KISDLGLSREIYSADY-YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242 (283)
T ss_pred EeccccccccccCCcc-eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999875432211 111233345678999999988889999999999999999998 99999765554444433321
Q ss_pred hhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1057 LQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.... .. ... . ....+++.+||+.||++||++.+|.++|..
T Consensus 243 ----~~~~-~~-------~~~---~--~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 243 ----QLLP-CS-------EDC---P--PRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ----CcCC-CC-------CCC---C--HHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1110 00 000 0 112368889999999999999999999875
No 100
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.1e-34 Score=318.89 Aligned_cols=251 Identities=26% Similarity=0.408 Sum_probs=201.4
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
..+|++.++||+|+||.||+|..+ |..||+|.+.... ..+.+.+|++++++++|+|++++++++...++..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 347889999999999999999775 7889999986533 35678999999999999999999998766556679999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.++++.... ..+++..+..++.|++.|++|||++||+||||||+||+++.++.+|++|||+++.....
T Consensus 83 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~---- 155 (256)
T cd05082 83 AKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 155 (256)
T ss_pred CCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc----
Confidence 99999999976432 34788999999999999999999999999999999999999999999999998643221
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||......+....+.+... ... .+.
T Consensus 156 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~----~~~-~~~----- 223 (256)
T cd05082 156 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK----MDA-PDG----- 223 (256)
T ss_pred --CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC----CCC-CCC-----
Confidence 122334568999999988889999999999999999998 9999976555444444332111 000 000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
.. ....+++.+|++.+|++||++.++++.|+++
T Consensus 224 -~~------~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 224 -CP------PVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -CC------HHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00 1122788999999999999999999999863
No 101
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.3e-35 Score=325.94 Aligned_cols=251 Identities=21% Similarity=0.311 Sum_probs=197.4
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.|++.++||+|+||.||++... +++.||+|++..... ....+.+|++++++++||||+++++++.... ..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC-eEEEEE
Confidence 4788899999999999999764 689999999864322 1345678999999999999999999987764 569999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++|+|.+++..... ..+++..+..++.|++.|++|||+.+|+||||||+||++++++.++++|||+++.....
T Consensus 80 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~- 155 (285)
T cd05605 80 TLMNGGDLKFHIYNMGN---PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG- 155 (285)
T ss_pred eccCCCcHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-
Confidence 99999999988865322 34889999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||...........+........ ..
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---------~~ 223 (285)
T cd05605 156 ---ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ---------EE 223 (285)
T ss_pred ---CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc---------cc
Confidence 112234689999999999888899999999999999999999999976554433333333222111 00
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
+... ... ...+++.+||+.||++|| ++++++++
T Consensus 224 ~~~~---~~~--~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 224 YSEK---FSE--AARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cCcc---cCH--HHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0000 011 112789999999999999 88899765
No 102
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.5e-35 Score=341.91 Aligned_cols=253 Identities=24% Similarity=0.344 Sum_probs=200.1
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||+||+|+.. +|+.||+|++.... .....+.+|++++..++||||+++++++.+. ...++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE-EHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC-CeEEEE
Confidence 36899999999999999999875 68999999986432 2345788999999999999999999988776 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 80 MEYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred EcCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 9999999999999864 23788999999999999999999999999999999999999999999999998754332
Q ss_pred CC--------------------------CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCC
Q 001171 992 PA--------------------------EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQ 1045 (1133)
Q Consensus 992 ~~--------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~ 1045 (1133)
.. .........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 20 0112234579999999999999999999999999999999999999997666
Q ss_pred hhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCC-HHHHHHH
Q 001171 1046 DEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS-MADIVFM 1110 (1133)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-~~evl~~ 1110 (1133)
.......+........++.. .. .. ....+++.+|+. ||.+||+ ++|++++
T Consensus 235 ~~~~~~~i~~~~~~~~~p~~-----~~---~~------~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 LQETYNKIINWKESLRFPPD-----PP---VS------PEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHHHHHhccCCcccCCCC-----CC---CC------HHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 54433333221111111000 00 00 112267888997 9999999 9999976
No 103
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9.9e-35 Score=323.26 Aligned_cols=260 Identities=20% Similarity=0.357 Sum_probs=201.2
Q ss_pred HhcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 906 (1133)
..++|++.+.||+|+||.||+|.++ .+..||+|++..... ....+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 4567999999999999999999753 256799999864322 2356889999999999999999999987654
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCC-----CCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEec
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQD-----GHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSE 981 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~D 981 (1133)
..++||||+++|+|.++++..+... ....++..+..++.|++.|++|||+.+++||||||+||++++++.++++|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 4599999999999999997643211 12367788889999999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhc
Q 001171 982 FGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060 (1133)
Q Consensus 982 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~ 1060 (1133)
||+++....... ........+++.|+|||++.++.++.++|||||||++|||++ |..||.........+.+...
T Consensus 163 fg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~---- 237 (277)
T cd05062 163 FGMTRDIYETDY-YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG---- 237 (277)
T ss_pred CCCccccCCcce-eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC----
Confidence 999865432211 111222345778999999988889999999999999999999 78898766555444433221
Q ss_pred cccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1061 QISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
..... ..... ....+++.+|++.||++||++.|+++.|++
T Consensus 238 ~~~~~--------~~~~~-----~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 238 GLLDK--------PDNCP-----DMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CcCCC--------CCCCC-----HHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 11110 00000 112378999999999999999999999874
No 104
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.6e-35 Score=335.03 Aligned_cols=264 Identities=22% Similarity=0.357 Sum_probs=201.1
Q ss_pred hcCCCcccccccccceeEEEEEE------CCceEEEEEEcccCCcC--HHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCC
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY------QDGMVLSIRRLRDGTID--ENTFRKEAEALGKV-KHRNLTVLRGYYAGPPD 906 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 906 (1133)
.++|++.++||+|+||.||+|.+ .+++.||||+++..... .+.+.+|++++.++ +||||+++++++...+.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 45799999999999999999964 34789999999754322 35678899999999 68999999998877666
Q ss_pred cEEEEEeccCCCCHHHHHHhhccC--------------------------------------------------------
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQ-------------------------------------------------------- 930 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 930 (1133)
..++||||+++|+|.++++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 678999999999999999753210
Q ss_pred ------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCC
Q 001171 931 ------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGS 1004 (1133)
Q Consensus 931 ------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt 1004 (1133)
....+++..+..++.||++|++|||+++|+||||||+||+++.++.+|++|||+++....... ........++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~ 244 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDARLP 244 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-hhhcCCCCCC
Confidence 012367888899999999999999999999999999999999999999999999875422211 1112223456
Q ss_pred CCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHH
Q 001171 1005 LGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEF 1083 (1133)
Q Consensus 1005 ~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1083 (1133)
..|+|||++.+..++.++|||||||++|||++ |..||......... .+....+..... +.. ..
T Consensus 245 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~--~~~-----~~------ 308 (343)
T cd05103 245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRLKEGTRMRA--PDY-----TT------ 308 (343)
T ss_pred cceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHH---HHHHhccCCCCC--CCC-----CC------
Confidence 78999999988889999999999999999997 99998654322211 111111111000 000 00
Q ss_pred HHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1084 LLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1084 ~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
....+++.+||+.||++||++.||+++|+.+..
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 112378889999999999999999999988654
No 105
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1e-34 Score=331.12 Aligned_cols=201 Identities=22% Similarity=0.420 Sum_probs=172.0
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.++|++.++||+|+||.||+|.++ ++..+|+|.+..... ....+.+|++++++++||||+++++++... +..++||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC-CEEEEEE
Confidence 468999999999999999999876 588899998865322 235688999999999999999999999876 4569999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC-CceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
||+++|+|.+++...+ .+++.....++.+++.|++|||+. +|+||||||+||+++.++.+|++|||++......
T Consensus 83 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 83 EHMDGGSLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred ecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999997633 378888899999999999999975 7999999999999999999999999998654221
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChh
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE 1047 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~ 1047 (1133)
......|+..|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 158 -----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 158 -----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred -----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 122346889999999998888999999999999999999999999755443
No 106
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-34 Score=318.74 Aligned_cols=253 Identities=25% Similarity=0.434 Sum_probs=202.8
Q ss_pred cCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++|.+.+.||+|+||.||+|.+..+..+|+|++.......+.+.+|++++++++|||++++++++.. ...++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE--EPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCcEEEEEcCC
Confidence 4688999999999999999988777789999987665566789999999999999999999998854 34589999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+++|.++++... ...+++..+..++.|++.|++|||+.|++||||||+||++++++.++++|||.++....... .
T Consensus 84 ~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--~ 158 (260)
T cd05069 84 KGSLLDFLKEGD---GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--T 158 (260)
T ss_pred CCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc--c
Confidence 999999997632 23478999999999999999999999999999999999999999999999999865432211 1
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
......++..|+|||+..+..++.++||||+||++|||++ |+.||......+...++..... .....
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~------- 226 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR-----MPCPQ------- 226 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-----CCCCc-------
Confidence 1122346678999999988889999999999999999999 8999976655554443322110 00000
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
. .. ....+++.+||+.||++||++++|++.|+.
T Consensus 227 ~---~~--~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 227 G---CP--ESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred c---cC--HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0 00 112378899999999999999999999985
No 107
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.1e-35 Score=341.97 Aligned_cols=253 Identities=18% Similarity=0.290 Sum_probs=193.9
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.++||+|+||.||+|... +|+.||||++.+... ..+.+.+|++++++++||||+++++++.+.. ..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ-YLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eeEEE
Confidence 36889999999999999999764 689999999864321 2356788999999999999999999998764 55999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+|++|||+++.....
T Consensus 80 ~E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 80 MEFLPGGDLMTMLIKYD-----TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred EeCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99999999999997643 3788888899999999999999999999999999999999999999999998632211
Q ss_pred CCC------------C--------------------------------CCCCCCCCCCCccCccccCCCCCCCCCchhHH
Q 001171 992 PAE------------A--------------------------------SSSTTPIGSLGYVSPEAASTGQPTKEADVYSF 1027 (1133)
Q Consensus 992 ~~~------------~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl 1027 (1133)
... . ......+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 0 00012469999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCC---CCH
Q 001171 1028 GIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDR---PSM 1104 (1133)
Q Consensus 1028 G~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~R---Ps~ 1104 (1133)
||++|||++|+.||......+....+........+ +... ... ....+++.+|+. +|.+| +++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-----p~~~---~~s------~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHETYRKIINWRETLYF-----PDDI---HLS------VEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCC-----CCCC---CCC------HHHHHHHHHHhc-CHhhcCCCCCH
Confidence 99999999999999766554443333221111000 0000 000 112367888987 66665 699
Q ss_pred HHHHHH
Q 001171 1105 ADIVFM 1110 (1133)
Q Consensus 1105 ~evl~~ 1110 (1133)
.|++++
T Consensus 300 ~~~l~h 305 (377)
T cd05629 300 HEIKSH 305 (377)
T ss_pred HHHhcC
Confidence 998876
No 108
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.1e-34 Score=324.61 Aligned_cols=263 Identities=22% Similarity=0.391 Sum_probs=206.0
Q ss_pred hcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 908 (1133)
.++|.+.+.||+|+||.||++... ++..+|+|.+..... ..+.+.+|++++++++|||++++++++.... ..
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 82 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD-PL 82 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-cc
Confidence 457889999999999999999742 356789999865432 2457899999999999999999999998764 45
Q ss_pred EEEEeccCCCCHHHHHHhhcc--------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEe
Q 001171 909 LLVYDYMPNGNLATLLQEASH--------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLS 980 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~ 980 (1133)
++||||+++++|.+++...+. .....+++..+..++.|++.||+|||++|++||||||+||++++++.++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~ 162 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG 162 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEec
Confidence 999999999999999976442 112348999999999999999999999999999999999999999999999
Q ss_pred ccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhh
Q 001171 981 EFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQR 1059 (1133)
Q Consensus 981 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~ 1059 (1133)
|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||......+....+..
T Consensus 163 dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~---- 237 (288)
T cd05093 163 DFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ---- 237 (288)
T ss_pred cCCccccccCCce-eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----
Confidence 9999875432211 111223345778999999988889999999999999999998 9999976655554443322
Q ss_pred ccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCC
Q 001171 1060 GQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVG 1117 (1133)
Q Consensus 1060 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~ 1117 (1133)
+......+ ... ....+++.+||+.||.+||++.|+.+.|+.+...
T Consensus 238 ~~~~~~~~-------~~~------~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 238 GRVLQRPR-------TCP------KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCcCCCCC-------CCC------HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 11111000 000 1124789999999999999999999999987643
No 109
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.6e-34 Score=318.68 Aligned_cols=256 Identities=25% Similarity=0.456 Sum_probs=207.1
Q ss_pred HhcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
..++|++.++||+|+||.||+|..+++..||||.+.......+.+.+|++++++++|||++++++++... ...++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE-EPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecC-CceEEEEec
Confidence 3467999999999999999999988888899999987767778899999999999999999999998765 445999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+++++|.+++.... ...+++..+..++.+++.|++|||+++++||||||+||+++.++.++++|||.++......
T Consensus 83 ~~~~~L~~~i~~~~---~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (261)
T cd05034 83 MSKGSLLDFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE-- 157 (261)
T ss_pred cCCCCHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh--
Confidence 99999999997633 2348899999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
........++..|+|||.+.+..++.++||||+||++||+++ |+.||...........+....... ....
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~---- 228 (261)
T cd05034 158 YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP-----RPPN---- 228 (261)
T ss_pred hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-----CCCC----
Confidence 111122234568999999988889999999999999999998 999997665555444433221100 0000
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.. ....+++.+|++.+|++||+++|+++.|+.
T Consensus 229 --~~------~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 229 --CP------EELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CC------HHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00 112378899999999999999999999986
No 110
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.2e-35 Score=340.67 Aligned_cols=253 Identities=21% Similarity=0.333 Sum_probs=196.0
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.++||+|+||+||+|+.. +|+.||||++.... .....+.+|+++++.++||||+++++++... ...++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~-~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE-NYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC-CeEEEE
Confidence 36899999999999999999875 58999999996432 1234578899999999999999999999876 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||+++.....
T Consensus 80 ~E~~~~g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 80 MEYLPGGDMMTLLMKKD-----TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred ECCCCCcHHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 99999999999997633 3789999999999999999999999999999999999999999999999998654221
Q ss_pred CCCC-----------------------------------CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh
Q 001171 992 PAEA-----------------------------------SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT 1036 (1133)
Q Consensus 992 ~~~~-----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t 1036 (1133)
.... ......+||+.|+|||++.+..++.++||||+||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 1000 00112469999999999998899999999999999999999
Q ss_pred CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCC---HHHHHHH
Q 001171 1037 GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS---MADIVFM 1110 (1133)
Q Consensus 1037 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs---~~evl~~ 1110 (1133)
|+.||...+..+....+........+ ... . .... ...+++.+|+. +|.+|++ +.|++++
T Consensus 235 G~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~-~---~~s~------~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 235 GYPPFCSDNPQETYRKIINWKETLQF----PDE-V---PLSP------EAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCccCC----CCC-C---CCCH------HHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99999766554443333221100000 000 0 0011 12267778886 8999997 8888764
No 111
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=9.2e-35 Score=329.18 Aligned_cols=240 Identities=23% Similarity=0.359 Sum_probs=187.4
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|+++ +++.||+|+++... ...+.+..|..++... +||||+++++++... ...++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~-~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK-EHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC-CEEEEEEcCCC
Confidence 46999999999999875 57899999986432 2234556677777654 899999999998876 45699999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++.... .+++..+..++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 80 gg~L~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---~ 151 (316)
T cd05592 80 GGDLMFHIQSSG-----RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---G 151 (316)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC---C
Confidence 999999987643 37888899999999999999999999999999999999999999999999986432211 2
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+... ...+ +...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~----~~~~------ 219 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--RPHF----PRWI------ 219 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCC----CCCC------
Confidence 233457999999999999888999999999999999999999999876655544433221 0000 0000
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHH-HHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMA-DIVF 1109 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~-evl~ 1109 (1133)
.. ...+++.+||+.||++||++. ++++
T Consensus 220 ~~------~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 220 SK------EAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CH------HHHHHHHHHccCCHHHcCCChHHHHc
Confidence 00 112788899999999999876 4543
No 112
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=298.79 Aligned_cols=254 Identities=20% Similarity=0.351 Sum_probs=210.9
Q ss_pred HhcCCCcc-cccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeC---CCCcE
Q 001171 835 ATRQFDEE-NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAG---PPDVR 908 (1133)
Q Consensus 835 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~---~~~~~ 908 (1133)
.+++|.+. ++||-|-.|.|..+.++ +|+.+|+|++.+. ...++|++..-+. .|||||.++++|.. .....
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 56677764 67999999999999664 6899999999754 4567899986666 69999999999864 34556
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC---CCceEEeccCcc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLD 985 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a 985 (1133)
.+|||.|+||.|+..++..+. ..+++.++..|+.||+.|++|||+.+|.||||||+|+|... +..+|++|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~---~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGD---QAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHccc---ccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 799999999999999998665 45899999999999999999999999999999999999964 556899999999
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISEL 1065 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1133)
+.... .....+.+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||.......+..-++..++.++
T Consensus 212 K~t~~----~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq---- 283 (400)
T KOG0604|consen 212 KETQE----PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ---- 283 (400)
T ss_pred cccCC----CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC----
Confidence 75422 3345667889999999999999999999999999999999999999976665555555555554432
Q ss_pred ccCCcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHH
Q 001171 1066 LEPGLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+.+...+|..+...+ ++|+.++..+|++|.++.|++.+
T Consensus 284 -------y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 284 -------YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred -------ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 233456788888777 89999999999999999999865
No 113
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=291.21 Aligned_cols=266 Identities=19% Similarity=0.284 Sum_probs=205.5
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCC-cCHHHHHHHHHHHhhccCCCeeeEEEEEeC----CCCcE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGT-IDENTFRKEAEALGKVKHRNLTVLRGYYAG----PPDVR 908 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~ 908 (1133)
...+|++.+.+|+|+|+-||.++. .+++.||+|++.-.. .+.+...+|++..++++|||+++++++... .....
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 356899999999999999999964 568999999997544 456788999999999999999999987642 33456
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCC--ceecccCccceeeCCCCceEEeccCccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD--MVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
|++++|...|+|.+.+...... +..+++.+.+.|+.+|++||++||+.. ++||||||.||++.+++.+++.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~k-g~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIK-GNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhc-CCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999999886543 456999999999999999999999998 9999999999999999999999999886
Q ss_pred ccccCCCCC------CCCCCCCCCCCccCccccC---CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHh
Q 001171 987 LAIATPAEA------SSSTTPIGSLGYVSPEAAS---TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQL 1057 (1133)
Q Consensus 987 ~~~~~~~~~------~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~ 1057 (1133)
...-.-... ........|..|+|||.+. +...++++|||||||++|+|+.|..||...- +
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~---------~-- 246 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY---------Q-- 246 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh---------h--
Confidence 432111100 0112335788999999984 4456899999999999999999999995210 1
Q ss_pred hhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1058 QRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
+.+.+.-.+...-..++.... +.+.+. +++.+|++.||.+||++.|++..++.+.
T Consensus 247 ~GgSlaLAv~n~q~s~P~~~~-yse~l~--~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 QGGSLALAVQNAQISIPNSSR-YSEALH--QLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cCCeEEEeeeccccccCCCCC-ccHHHH--HHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 122222222222222222222 233222 7999999999999999999999998753
No 114
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.4e-35 Score=346.37 Aligned_cols=257 Identities=23% Similarity=0.321 Sum_probs=201.3
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCC----
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPD---- 906 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~---- 906 (1133)
..++|++.++||+|+||+||+|+. .+|+.||||++...... ...+.+|+.++..++|+|++++++.+.....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 346899999999999999999976 46899999998654332 3567889999999999999999877653221
Q ss_pred ---cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccC
Q 001171 907 ---VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG 983 (1133)
Q Consensus 907 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 983 (1133)
..++||||+++|+|.++++.... ....+++..+..++.|++.||+|+|+.+|+||||||+||+++.++.+||+|||
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 34799999999999999976432 23458889999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccc
Q 001171 984 LDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIS 1063 (1133)
Q Consensus 984 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 1063 (1133)
+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.. ....
T Consensus 189 ls~~~~~~~~-~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~----~~~~ 263 (496)
T PTZ00283 189 FSKMYAATVS-DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA----GRYD 263 (496)
T ss_pred cCeecccccc-ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc----CCCC
Confidence 9875432211 1123345799999999999998999999999999999999999999976555443333222 1111
Q ss_pred ccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1064 ELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. +. .... ....+++.+||+.||.+||++.+++++
T Consensus 264 ~-~~-------~~~~-----~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 264 P-LP-------PSIS-----PEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred C-CC-------CCCC-----HHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1 01 0000 112378899999999999999999864
No 115
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.3e-34 Score=316.31 Aligned_cols=248 Identities=19% Similarity=0.301 Sum_probs=193.8
Q ss_pred ccccccceeEEEEEEC---CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCC
Q 001171 844 VLSRGRYGLIFKASYQ---DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNG 918 (1133)
Q Consensus 844 ~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~g 918 (1133)
.||+|+||.||+|.++ .+..||+|.+...... .+.+.+|++++++++||||+++++++.. ...++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~--~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA--EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC--CCeEEEEEeCCCC
Confidence 3899999999999764 3567999998654322 3568899999999999999999998864 3458999999999
Q ss_pred CHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCC
Q 001171 919 NLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSS 998 (1133)
Q Consensus 919 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 998 (1133)
+|.+++.... ..+++..+..++.|++.|++|||++|++||||||+||+++.++.+|++|||+++............
T Consensus 80 ~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 80 PLNKFLSGKK----DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 9999987532 348899999999999999999999999999999999999999999999999987543222111112
Q ss_pred CCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCC
Q 001171 999 TTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPES 1077 (1133)
Q Consensus 999 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1077 (1133)
....++..|+|||++.+..++.++|||||||++||+++ |+.||......+....+.+... . .+++. ..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----~-~~~~~------~~ 224 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR----L-DCPAE------CP 224 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC----C-CCCCC------CC
Confidence 22234578999999988889999999999999999996 9999976666554444332211 0 01110 00
Q ss_pred hhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1078 SEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1078 ~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
....+++.+||..||++||++.+|.+.|+..
T Consensus 225 ------~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 225 ------PEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ------HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1122688999999999999999999999864
No 116
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6e-35 Score=333.80 Aligned_cols=251 Identities=23% Similarity=0.330 Sum_probs=192.9
Q ss_pred CCCcccccccccceeEEEEEEC----CceEEEEEEcccCC-----cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCc
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ----DGMVLSIRRLRDGT-----IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 907 (1133)
+|++.+.||+|+||.||+++.. +++.||+|++.+.. ...+.+.+|+++++++ +||+|+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~ 79 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE-AK 79 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC-CE
Confidence 4888999999999999999653 57899999986422 1234678899999999 599999999988765 45
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQRD-----NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 589999999999999987532 378899999999999999999999999999999999999999999999999875
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
..... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.+......
T Consensus 155 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~----- 227 (332)
T cd05614 155 FLSEE--KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD----- 227 (332)
T ss_pred ccccC--CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC-----
Confidence 42221 1122345799999999999765 478899999999999999999999965433322222222221111
Q ss_pred cCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1067 EPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
+... .... ....+++.+|++.||++|| ++++++++
T Consensus 228 -~~~~---~~~~-----~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 228 -PPFP---SFIG-----PEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred -CCCC---CCCC-----HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1110 0000 0122788899999999999 77788754
No 117
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.8e-34 Score=320.28 Aligned_cols=258 Identities=19% Similarity=0.341 Sum_probs=197.3
Q ss_pred CCcccccccccceeEEEEEECC-c--eEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCC-----CCc
Q 001171 839 FDEENVLSRGRYGLIFKASYQD-G--MVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGP-----PDV 907 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~~-g--~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 907 (1133)
|.+.++||+|+||.||+|.+.. + ..||+|.++.... ..+.+.+|++++++++||||+++++++... ...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999998754 3 3689998865422 245688899999999999999999987432 123
Q ss_pred EEEEEeccCCCCHHHHHHhhccC-CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQ-DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
.++||||+++|+|.+++...+.. ....+++.....++.|++.|++|||+++|+||||||+||++++++.++|+|||+++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 48999999999999988543321 22458899999999999999999999999999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcccccc
Q 001171 987 LAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISEL 1065 (1133)
Q Consensus 987 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1133)
....... ........+++.|+|||+..+..++.++|||||||++|||++ |+.||...........+.. +.....
T Consensus 161 ~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~----~~~~~~ 235 (272)
T cd05075 161 KIYNGDY-YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ----GNRLKQ 235 (272)
T ss_pred ccCcccc-eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc----CCCCCC
Confidence 5432211 111223346678999999998889999999999999999999 8899976555444433322 111000
Q ss_pred ccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1066 LEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
.... .+ ...+++.+||+.||++||++.|+++.|+.+
T Consensus 236 --------~~~~---~~--~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 236 --------PPDC---LD--GLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --------CCCC---CH--HHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000 00 123789999999999999999999999874
No 118
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.7e-34 Score=334.53 Aligned_cols=262 Identities=22% Similarity=0.299 Sum_probs=200.6
Q ss_pred HhcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCcC--HHHHHHHHHHHhhcc-CCCeeeEEEEEeCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTID--ENTFRKEAEALGKVK-HRNLTVLRGYYAGPP 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~ 905 (1133)
..++|.+.++||+|+||.||+|+++ .++.||+|++...... .+.+.+|++++.++. |||||++++++....
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 4457888999999999999999864 3468999999754322 346889999999997 999999999998764
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccC-------------------------------------------------------
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQ------------------------------------------------------- 930 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 930 (1133)
..++||||+++|+|.+++++.+..
T Consensus 115 -~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 115 -PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred -CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 459999999999999999764310
Q ss_pred --------------------------------------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeC
Q 001171 931 --------------------------------------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFD 972 (1133)
Q Consensus 931 --------------------------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~ 972 (1133)
....+++.....++.||+.|++|||+.+|+||||||+||+++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC 273 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe
Confidence 112367778889999999999999999999999999999999
Q ss_pred CCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHH
Q 001171 973 ADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVK 1051 (1133)
Q Consensus 973 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~ 1051 (1133)
.++.++++|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||......+...
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~ 352 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY 352 (401)
T ss_pred CCCEEEEEecCcceeccccccc-ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHH
Confidence 9999999999998754322111 11223457789999999988889999999999999999998 899986544333222
Q ss_pred HHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1052 WVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
.... .+.... . +... . ....+++.+||+.+|++||+++||++.|+.+
T Consensus 353 ~~~~---~~~~~~--~------p~~~---~--~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 353 NAIK---RGYRMA--K------PAHA---S--DEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHH---cCCCCC--C------CCCC---C--HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 2111 110000 0 0000 0 1123788899999999999999999999875
No 119
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-34 Score=318.43 Aligned_cols=252 Identities=20% Similarity=0.291 Sum_probs=197.3
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc------CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI------DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
+.|++.+.||+|++|.||+|... +++.||+|.+..... ..+.+.+|++++++++||||+++++++.... ..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE-TLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC-eEE
Confidence 46889999999999999999764 689999999864321 1246788999999999999999999998764 569
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||+++++|.+++...+ .+++..+..++.|++.|++|||+.||+||||||+||+++.++.++|+|||.++...
T Consensus 81 ~v~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYG-----ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEEECCCCcHHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 9999999999999997643 37788889999999999999999999999999999999999999999999986543
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.............|+..|+|||++.+..++.++||||+|+++|||++|+.||.................... +.
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~-- 229 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ----LP-- 229 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCC----CC--
Confidence 221111111334678899999999988899999999999999999999999965443332222211100000 00
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... . ....+++.+||..+|.+||++.|++++
T Consensus 230 -----~~~---~--~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 230 -----SHV---S--PDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----ccC---C--HHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000 0 112378899999999999999999875
No 120
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.9e-35 Score=330.89 Aligned_cols=246 Identities=23% Similarity=0.334 Sum_probs=193.3
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCC-CeeeEEEEEeCCCCcEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHR-NLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hp-niv~l~~~~~~~~~~~~lV 911 (1133)
+|++.+.||+|+||.||+|+.+ +++.||+|++.... ...+.+..|.+++..++|+ +|+.+++++... +..++|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM-DRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-CEEEEE
Confidence 4888999999999999999775 57899999986432 2345677899999999765 577888888765 456999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~E~~~~g~L~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 80 MEYVNGGDLMYHIQQVG-----KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred EcCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 99999999999997643 3788899999999999999999999999999999999999999999999998642211
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+... ...++
T Consensus 155 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~--~~~~~-------- 221 (324)
T cd05587 155 ---GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH--NVSYP-------- 221 (324)
T ss_pred ---CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCC--------
Confidence 11223456899999999999988999999999999999999999999876655554443321 00000
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCH-----HHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSM-----ADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~-----~evl~~ 1110 (1133)
.... ....+++.+|+..||.+|++. .+++++
T Consensus 222 ---~~~~-----~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 222 ---KSLS-----KEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred ---CCCC-----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0000 112378899999999999976 566543
No 121
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.2e-35 Score=337.45 Aligned_cols=252 Identities=20% Similarity=0.294 Sum_probs=196.4
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.++|++.++||+|+||.||+|+.. +++.||+|++.+.. ...+.+.+|+++++.++||||+++++++... ...++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~-~~~~l 120 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD-KYLYM 120 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC-CEEEE
Confidence 457999999999999999999775 58899999986422 2234577899999999999999999988775 45699
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++|+|.+++... .++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 121 v~Ey~~gg~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999998752 267788888999999999999999999999999999999999999999999865422
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCC----CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTG----QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
.. ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...+.......+........++
T Consensus 195 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--- 269 (370)
T cd05596 195 NG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFP--- 269 (370)
T ss_pred CC--cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCC---
Confidence 11 1122345799999999998643 47899999999999999999999997665544443332211110000
Q ss_pred cCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCC--CCCHHHHHHH
Q 001171 1067 EPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLD--RPSMADIVFM 1110 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~--RPs~~evl~~ 1110 (1133)
... ... ....+++.+|+..+|.+ ||++.|++++
T Consensus 270 --~~~---~~s------~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 270 --DDI---EIS------KQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --CcC---CCC------HHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 000 001 11227888999999988 9999999876
No 122
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=8.2e-35 Score=331.17 Aligned_cols=244 Identities=21% Similarity=0.349 Sum_probs=191.7
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHH---hhccCCCeeeEEEEEeCCCCcEEE
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEAL---GKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l---~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
|++.+.||+|+||.||+|.++ +|+.||||++.... ...+.+.+|++++ ++++||||+++++++.... ..++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~-~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED-HVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC-EEEE
Confidence 677899999999999999775 68999999986432 1234566676655 5668999999999998764 5599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++|+|..+++. ..+++..+..++.||+.|++|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 80 v~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 80 VMEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EEcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999988764 2488999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
. ........|++.|+|||++.+..++.++|||||||++|||++|+.||...+..+....+... ....+
T Consensus 154 ~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~p------- 221 (324)
T cd05589 154 F---GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND--EVRYP------- 221 (324)
T ss_pred C---CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCC-------
Confidence 1 12233457999999999999889999999999999999999999999766655544433221 11010
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
.... ....+++.+|++.||.+|| ++.+++++
T Consensus 222 ----~~~~-----~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 222 ----RFLS-----REAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred ----CCCC-----HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 0000 1123789999999999999 57777654
No 123
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-34 Score=341.54 Aligned_cols=267 Identities=20% Similarity=0.331 Sum_probs=195.7
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCC-------CC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP-------PD 906 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-------~~ 906 (1133)
...+|++.++||+|+||.||+|... +++.||||++.... ....+|+.++++++||||+++++++... ..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 3457999999999999999999775 58999999986432 3456799999999999999999876421 12
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC-ceEEeccCcc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF-EAHLSEFGLD 985 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a 985 (1133)
..++||||++ +++.+++..... ....+++..+..++.||+.||+|||+++|+||||||+||+++.++ .+||+|||+|
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 3468999996 578777765322 234588999999999999999999999999999999999999765 6999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
+..... .......||+.|+|||++.+. .++.++||||+||++|||++|++||......+....+.+.........
T Consensus 219 ~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~ 294 (440)
T PTZ00036 219 KNLLAG----QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQ 294 (440)
T ss_pred hhccCC----CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 754321 122345789999999998654 689999999999999999999999987665544444433322111000
Q ss_pred c--ccCCcCCC--CC-CChhHHHH------HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 L--LEPGLLEL--DP-ESSEWEEF------LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 ~--~~~~~~~~--~~-~~~~~~~~------~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ..+.+... +. ........ ..+.+++.+||+.||.+||++.|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 295 LKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0 00111000 00 00011110 123489999999999999999999954
No 124
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.8e-34 Score=319.31 Aligned_cols=256 Identities=24% Similarity=0.449 Sum_probs=200.8
Q ss_pred cCCCcccccccccceeEEEEEEC----CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ----DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
++|++.+.||+|+||.||+|.+. .+..+|+|.+.....+ .+.+.+|++++++++||||+++++++...+ ..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK-PVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-ccEE
Confidence 46888999999999999999763 2457999998654322 357889999999999999999999997664 5599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++++|.+++.... ..+++..+..++.|++.|++|||+.+++||||||+||+++.++.++++|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 83 VTEYMENGSLDAFLRKHD----GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999997642 2478899999999999999999999999999999999999999999999999875533
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
............++..|+|||++.+..++.++|||||||++||+++ |..||......+....+.+... . +.
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~---~-----~~ 230 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR---L-----PA 230 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc---C-----CC
Confidence 2221111122234568999999988889999999999999999887 9999976655544444332110 0 00
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
.. ... ....+++.+|++.+|.+||++.++++.|++.
T Consensus 231 ~~---~~~------~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 231 PM---DCP------AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CC---CCC------HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00 000 1123788899999999999999999999864
No 125
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.6e-34 Score=318.13 Aligned_cols=258 Identities=18% Similarity=0.325 Sum_probs=200.7
Q ss_pred CCcccccccccceeEEEEEECC----ceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCC-----
Q 001171 839 FDEENVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPD----- 906 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----- 906 (1133)
|.+.++||+|+||.||+|.... +..||+|+++..... .+.+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678999999999999997642 478999998754332 3578899999999999999999998865432
Q ss_pred cEEEEEeccCCCCHHHHHHhhccC-CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQ-DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
..++||||+++|+|.+++...... ....+++.....++.|++.||+|||+.+|+||||||+||++++++.+|++|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 358999999999999998664321 2245889999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
+....... ........++..|+|||++.+..++.++|||||||++|||++ |..||......+..+.+... ....
T Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~----~~~~ 235 (273)
T cd05035 161 KKIYSGDY-YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG----NRLK 235 (273)
T ss_pred eecccccc-ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC----CCCC
Confidence 75533221 111222335678999999988889999999999999999999 88999766555544443321 1111
Q ss_pred cccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1065 LLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
... .. .....+++.+||+.||.+||++.|+++.|+++
T Consensus 236 ~~~-------~~------~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPE-------DC------LDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCc-------CC------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 00 01223788899999999999999999999875
No 126
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=323.95 Aligned_cols=246 Identities=23% Similarity=0.419 Sum_probs=199.4
Q ss_pred cCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc-C---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI-D---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
..|.-.+.||.|+||.||.|++ ++.++||||++..... . -.++..|+..+++++|||++.+.|+|... ...|+|
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre-~TaWLV 104 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE-HTAWLV 104 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc-chHHHH
Confidence 3466778899999999999966 5789999999964332 2 35778999999999999999999999875 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||| -|+-.|++.-.+ +.+.+..+..|+.+.+.||+|||+.+.||||||+.|||+++.|.||++|||.|...
T Consensus 105 MEYC-lGSAsDlleVhk----KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~--- 176 (948)
T KOG0577|consen 105 MEYC-LGSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM--- 176 (948)
T ss_pred HHHH-hccHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc---
Confidence 9999 678888887654 34778888999999999999999999999999999999999999999999988543
Q ss_pred CCCCCCCCCCCCCCCccCccccC---CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAAS---TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
.....++|||.|||||++. .+.|+-++||||+|++..|+...++|+...+.....-.+.+. . .|
T Consensus 177 ----~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN----e-----sP 243 (948)
T KOG0577|consen 177 ----APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----E-----SP 243 (948)
T ss_pred ----CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc----C-----CC
Confidence 2345679999999999984 578999999999999999999999998765554444333332 0 11
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.+ ...+|.++.. .++..|+++-|.+|||.++++++-
T Consensus 244 tL-----qs~eWS~~F~--~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 244 TL-----QSNEWSDYFR--NFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred CC-----CCchhHHHHH--HHHHHHHhhCcccCCcHHHHhhcc
Confidence 11 2344555443 688899999999999999998764
No 127
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=8.3e-35 Score=330.69 Aligned_cols=241 Identities=23% Similarity=0.372 Sum_probs=192.0
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|+.+ +++.||+|++.... ...+.+..|.++++.+ +||||+++++++.... ..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~-~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD-RLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-eEEEEEeCCC
Confidence 46999999999999775 57899999986532 2234567899998876 7999999999998764 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|..++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~---~~ 151 (321)
T cd05591 80 GGDLMFQIQRSR-----KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN---GV 151 (321)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC---Cc
Confidence 999999987643 3788899999999999999999999999999999999999999999999998643221 11
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+... . ...+...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~----~---~~~p~~~----- 219 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD----D---VLYPVWL----- 219 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC----C---CCCCCCC-----
Confidence 223456899999999999889999999999999999999999999876665554443321 1 0011100
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCC-------CHHHHHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRP-------SMADIVFM 1110 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RP-------s~~evl~~ 1110 (1133)
. ....+++.+|++.||++|| ++.+++++
T Consensus 220 ~------~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 220 S------KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred C------HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 0 1123788899999999999 78888755
No 128
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.5e-34 Score=326.38 Aligned_cols=262 Identities=22% Similarity=0.308 Sum_probs=205.1
Q ss_pred CCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcCHHHHHHHHHHHhhcc-C-----CCeeeEEEEEeCCCCcEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDENTFRKEAEALGKVK-H-----RNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h-----pniv~l~~~~~~~~~~~~l 910 (1133)
+|++.++||+|+||.|.+|.+ ++++.||||+++....-..+...|+.+|..++ | -|+|++++||..... .|+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H-lci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH-LCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc-eee
Confidence 899999999999999999955 56999999999876655667778999999997 3 389999999987654 499
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC--CceEEeccCccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD--FEAHLSEFGLDRLA 988 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~ 988 (1133)
|+|.+ ..+|+++++..+..+ ++...++.++.||+.||.+||+.+|||+||||+|||+... ..+||+|||.|.+.
T Consensus 266 VfELL-~~NLYellK~n~f~G---lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRG---LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCC---CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 679999999876543 8999999999999999999999999999999999999653 46899999998754
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc-------
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ------- 1061 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~------- 1061 (1133)
.. .....+-+..|+|||++.|..|+.+.||||||||++||++|.+-|.+.+..+....+.+.+..+.
T Consensus 342 ~q------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 342 SQ------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred CC------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 22 12255677899999999999999999999999999999999888887777666666555332111
Q ss_pred --ccccccC-----------C------------------cC-CCCCCChhH------HHHHHhHhhhhccCCCCCCCCCC
Q 001171 1062 --ISELLEP-----------G------------------LL-ELDPESSEW------EEFLLGVKVGLLCTAPDPLDRPS 1103 (1133)
Q Consensus 1062 --~~~~~~~-----------~------------------~~-~~~~~~~~~------~~~~~~~~li~~Cl~~dP~~RPs 1103 (1133)
...+++. . .. ..+.....+ .+....++++.+|+..||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 0111111 0 00 000011111 11223358999999999999999
Q ss_pred HHHHHHH
Q 001171 1104 MADIVFM 1110 (1133)
Q Consensus 1104 ~~evl~~ 1110 (1133)
+.|.+++
T Consensus 496 p~qal~H 502 (586)
T KOG0667|consen 496 PAQALNH 502 (586)
T ss_pred HHHHhcC
Confidence 9999965
No 129
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.2e-34 Score=320.63 Aligned_cols=258 Identities=19% Similarity=0.335 Sum_probs=200.2
Q ss_pred cCCCcccccccccceeEEEEEEC-Cce----EEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGM----VLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
++|++.+.||+|+||+||+|.+. +++ .+++|.+..... ...++..|+.++++++||||+++++++... ..+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~--~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA--SLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC--ccE
Confidence 46888999999999999999774 343 477888753322 235677888899999999999999988643 347
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+++||+++|+|.+++.... ..+++..+..++.||+.|++|||+++++||||||+||++++++.+|++|||+++...
T Consensus 85 ~i~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHR----DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEEeCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 8999999999999997643 248899999999999999999999999999999999999999999999999997553
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
.... ........++..|+|||++.++.++.++|||||||++||+++ |+.||.........+.+.+ +.... .+
T Consensus 161 ~~~~-~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~--~~ 233 (279)
T cd05111 161 PDDK-KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK----GERLA--QP 233 (279)
T ss_pred CCCc-ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC----CCcCC--CC
Confidence 2221 112233457778999999988899999999999999999998 9999976655444333321 11110 00
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCC
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGP 1118 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~ 1118 (1133)
. ... ....+++.+||..||++||++.|+++.|+.+...+
T Consensus 234 ~-------~~~----~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 234 Q-------ICT----IDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred C-------CCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 0 000 11236788999999999999999999998866543
No 130
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.8e-34 Score=315.81 Aligned_cols=249 Identities=23% Similarity=0.381 Sum_probs=197.3
Q ss_pred cccccccceeEEEEEECC----ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|.+.. +..||+|.+..... ..+.+.+|+++++++.|||++++++++... ..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE--PLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC--ceEEEEEeCC
Confidence 469999999999996532 37899999876554 356788999999999999999999988643 3589999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++.... .+++..+..++.|++.|++|||+.+++||||||+||+++.++.+|++|||.++..........
T Consensus 79 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 79 LGPLLKYLKKRR-----EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 999999998643 378999999999999999999999999999999999999999999999999875533222111
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
......++..|+|||.+.+..++.++|||||||++|||++ |+.||...+..+....+.+... ... + .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~----~~~--~------~ 221 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER----LPR--P------E 221 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc----CCC--C------C
Confidence 1222234568999999988889999999999999999998 9999977666555544433210 000 0 0
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
. .. ....+++.+|+..+|++||++.++++.|++..
T Consensus 222 ~---~~--~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 222 E---CP--QEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred C---CC--HHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0 00 11237899999999999999999999998753
No 131
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.1e-34 Score=321.76 Aligned_cols=267 Identities=21% Similarity=0.334 Sum_probs=197.2
Q ss_pred CCcccccccccceeEEEEEE-----CCceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEEE
Q 001171 839 FDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRLL 910 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~l 910 (1133)
|++.++||+|+||+||.+.+ .++..||+|.+..... ..+.+.+|++++++++||||+++++++... ....++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 48889999999999988643 3578899999875432 346788999999999999999999988654 345689
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++++|.+++... .+++..+..++.|++.|++|||+++|+||||||+||++++++.++++|||+++....
T Consensus 86 v~e~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred EecCCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 99999999999999752 389999999999999999999999999999999999999999999999999875533
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChh--hHHHHHHHHhhhccccccccC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE--DIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
............++..|+|||.+.+..++.++|||||||++|||++|..||...... +...............+.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER 239 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc
Confidence 221111122234566799999998888999999999999999999999998543211 111000000000011111111
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
......+. ... ....+++.+||+.||++||+++++++.|+.+.
T Consensus 240 ~~~~~~~~--~~~--~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 240 GMRLPCPK--NCP--QEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCC--CCC--HHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11100000 000 12237899999999999999999999998754
No 132
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.6e-34 Score=323.99 Aligned_cols=261 Identities=25% Similarity=0.431 Sum_probs=205.3
Q ss_pred cCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCcC-HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
++|.+.+.||+|+||.||+|... ++..+++|.+...... .+.+.+|++++++++||||+++++++.... ..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD-PLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC-ceE
Confidence 45888899999999999999642 3567899998654332 357899999999999999999999998764 459
Q ss_pred EEEeccCCCCHHHHHHhhcc-----------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceE
Q 001171 910 LVYDYMPNGNLATLLQEASH-----------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 978 (1133)
+||||+++++|.+++..... .....+++..++.++.||+.|++|||++||+||||||+||+++.++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~ 163 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVK 163 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence 99999999999999986432 1123488999999999999999999999999999999999999999999
Q ss_pred EeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHh
Q 001171 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQL 1057 (1133)
Q Consensus 979 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~ 1057 (1133)
++|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |+.||......+..+.+..
T Consensus 164 l~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-- 240 (291)
T cd05094 164 IGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ-- 240 (291)
T ss_pred ECCCCcccccCCCce-eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC--
Confidence 999999865432211 111233456788999999988889999999999999999999 9999976665554443222
Q ss_pred hhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1058 QRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
+....... ... ....+++.+||+.||++||++.+|++.|+++..
T Consensus 241 --~~~~~~~~-------~~~------~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 241 --GRVLERPR-------VCP------KEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred --CCCCCCCc-------cCC------HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 11111100 000 112378999999999999999999999998754
No 133
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-34 Score=346.17 Aligned_cols=252 Identities=19% Similarity=0.222 Sum_probs=197.6
Q ss_pred CCCcccccccccceeEEEEEEC-C-ceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-D-GMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
.|.+.+.||+|+||.||+|... + ++.||+|++..... ....+.+|++++++++|||||++++++... +..++||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD-DKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC-CEEEEEEEC
Confidence 4889999999999999999654 3 67788887754332 234677899999999999999999999876 456999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+++|+|.+++..... ....+++..+..++.||+.||+|+|+++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 147 ~~gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~-~ 224 (478)
T PTZ00267 147 GSGGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV-S 224 (478)
T ss_pred CCCCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc-c
Confidence 999999998875322 12347888899999999999999999999999999999999999999999999997543221 1
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+... ...... .
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~----~~~~~~-~------ 293 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG----KYDPFP-C------ 293 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC----CCCCCC-c------
Confidence 11233457999999999999889999999999999999999999999766554444333221 111000 0
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
... ....+++.+||+.||++||++.+++.
T Consensus 294 ~~s------~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 294 PVS------SGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred cCC------HHHHHHHHHHhccChhhCcCHHHHHh
Confidence 000 11237888999999999999999874
No 134
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.4e-34 Score=316.42 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=198.0
Q ss_pred cccccccceeEEEEEECC--c--eEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQD--G--MVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|++|.||+|.+.+ + ..||+|.+..... ..+.+.+|++++++++||||+++++++.. ...++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEecC
Confidence 468999999999997643 3 3699999976554 34678899999999999999999999877 55689999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+++|.+++..... ..+++...+.++.|++.||+|||+++++||||||+||+++.++.+|++|||+++..........
T Consensus 79 ~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 79 LGSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CCcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 9999999986432 3489999999999999999999999999999999999999999999999999876543222222
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
......++..|+|||++.+..++.++|||||||++|||++ |+.||......+....+....... ..+ .
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~------~ 224 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERL-----ERP------E 224 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcC-----CCC------c
Confidence 2233457789999999988889999999999999999999 999997665555444433211000 000 0
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
. . .....+++.+|++.+|++||++.|+++.|.
T Consensus 225 ~---~--~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 A---C--PQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred c---C--CHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 0 012237889999999999999999999885
No 135
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.8e-34 Score=319.51 Aligned_cols=256 Identities=24% Similarity=0.472 Sum_probs=200.3
Q ss_pred cCCCcccccccccceeEEEEEEC-Cc---eEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DG---MVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.+|+..+.||+|+||.||+|..+ ++ ..+|+|++..... ..+.+.+|++++++++|||++++.+++..... .++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~l 83 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP-AMI 83 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC-cEE
Confidence 46788899999999999999764 23 4799999865432 24578899999999999999999999987644 599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++++|.+++.... ..+++..+..++.|++.|++|||+.|++||||||+||+++.++.++++|||+++....
T Consensus 84 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD----GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999997532 3478999999999999999999999999999999999999999999999999865433
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.............+..|+|||++....++.++|||||||++|||++ |+.||......+....+.... ..+.
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~---~~~~----- 231 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF---RLPA----- 231 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC---CCCC-----
Confidence 2211111112233457999999988889999999999999999998 999997665554444433211 0000
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
.. ... ....+++.+||+.+|++||++.+|++.|+++
T Consensus 232 ~~---~~~------~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 232 PM---DCP------SAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CC---CCC------HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 000 1123789999999999999999999999874
No 136
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=7.8e-35 Score=330.40 Aligned_cols=241 Identities=22% Similarity=0.357 Sum_probs=190.7
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|+.+ +++.||+|++.+.. ...+.+.+|.++++.+ +||||+++++++.... ..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~-~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD-RLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC-EEEEEEcCCC
Confidence 46999999999999875 58899999986432 2235667888888877 6999999999988764 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++...+ .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~g~L~~~i~~~~-----~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~---~~ 151 (320)
T cd05590 80 GGDLMFHIQKSR-----RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN---GK 151 (320)
T ss_pred CchHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---CC
Confidence 999999987643 3788999999999999999999999999999999999999999999999998643211 12
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+... .. ..+.. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~----~~---~~~~~-----~ 219 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND----EV---VYPTW-----L 219 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC----CC---CCCCC-----C
Confidence 233457999999999999888999999999999999999999999876655544443221 10 00100 0
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCH------HHHHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSM------ADIVFM 1110 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~------~evl~~ 1110 (1133)
. ....+++.+|++.||++||++ ++++++
T Consensus 220 ~------~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 220 S------QDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred C------HHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 0 112378899999999999998 666543
No 137
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.3e-34 Score=320.19 Aligned_cols=259 Identities=22% Similarity=0.361 Sum_probs=200.3
Q ss_pred hcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 907 (1133)
+++|.+.+.||+|+||.||+|.+. .+..||+|.+..... ....+.+|+.++++++||||+++++++.+...
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~- 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP- 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC-
Confidence 467899999999999999999775 357899998864332 24568899999999999999999998877644
Q ss_pred EEEEEeccCCCCHHHHHHhhccC--CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC---ceEEecc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQ--DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF---EAHLSEF 982 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~---~~kl~Df 982 (1133)
.++||||+++++|.+++...+.. ....+++..+..++.||+.|++|||+++++||||||+||+++.++ .+|++||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 48999999999999999876432 123588999999999999999999999999999999999998754 5899999
Q ss_pred CcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcc
Q 001171 983 GLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQ 1061 (1133)
Q Consensus 983 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~ 1061 (1133)
|+++....... .........+..|+|||++.+..++.++|||||||++|||++ |+.||.....+.....+.... .
T Consensus 164 g~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~-- 239 (277)
T cd05036 164 GMARDIYRASY-YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG-R-- 239 (277)
T ss_pred ccccccCCccc-eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-c--
Confidence 99875522111 111122334568999999988889999999999999999997 999997666555443322210 0
Q ss_pred ccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1062 ISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.+. . .... ....+++.+|++.+|++||++.||+++|+.
T Consensus 240 -~~~-~-------~~~~-----~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 240 -LDP-P-------KGCP-----GPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred -CCC-C-------CCCC-----HHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 000 0 0000 122378899999999999999999999863
No 138
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=8.2e-35 Score=335.89 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=194.7
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
..++|++.++||+|+||.||+|+++ +++.||+|.+.+.. ...+.+.+|+++++.++||||+++++++... ...+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~-~~~~ 119 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD-KYLY 119 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CEEE
Confidence 3467999999999999999999876 57899999985421 2245678899999999999999999998876 4569
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||+++|+|.+++... .+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999999752 26788889999999999999999999999999999999999999999999987543
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCC----CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccc
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTG----QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISEL 1065 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1133)
... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...+.......+........+++
T Consensus 194 ~~~--~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~- 270 (370)
T cd05621 194 ETG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE- 270 (370)
T ss_pred cCC--ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCC-
Confidence 211 1122356799999999998653 378899999999999999999999976655444333322111111000
Q ss_pred ccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCC--CCCHHHHHHH
Q 001171 1066 LEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLD--RPSMADIVFM 1110 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~--RPs~~evl~~ 1110 (1133)
. ..... ...+++.+|+..++.+ |+++.|++++
T Consensus 271 ----------~-~~~s~--~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 271 ----------D-VEISK--HAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ----------c-ccCCH--HHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0 00001 1126777788755544 8999999987
No 139
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-34 Score=335.50 Aligned_cols=194 Identities=20% Similarity=0.277 Sum_probs=165.8
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
..+|++.+.||+|+||.||+|... +++.||+|+.. .+.+.+|++++++++||||+++++++... ...++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~-~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYN-KFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEEC-CeeEEEEec
Confidence 357999999999999999999764 68899999753 24578899999999999999999999765 445899999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+ .++|.+++.... .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 165 ~-~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-- 236 (391)
T PHA03212 165 Y-KTDLYCYLAAKR-----NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-- 236 (391)
T ss_pred C-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc--
Confidence 9 478888886532 37889999999999999999999999999999999999999999999999986432211
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCcc
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMF 1043 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~ 1043 (1133)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 1222345799999999999988999999999999999999999988743
No 140
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-34 Score=328.58 Aligned_cols=239 Identities=21% Similarity=0.346 Sum_probs=188.5
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|+++ +|+.||+|++.... ...+.+..|.+++... +||+|+++++++... +..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK-EHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC-CEEEEEECCCC
Confidence 46999999999999875 58899999986532 2345567788888765 899999999999876 45599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++.... .+++..+..++.||++||+|||++||+||||||+||+++.++.++|+|||+++..... ..
T Consensus 80 ~g~L~~~i~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~ 151 (316)
T cd05620 80 GGDLMFHIQDKG-----RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG---DN 151 (316)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---CC
Confidence 999999987632 3788899999999999999999999999999999999999999999999998642111 12
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+.......+... ...++.. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~----------~ 219 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--TPHYPRW----------I 219 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCC----------C
Confidence 233457899999999999999999999999999999999999999766655444433221 0101000 0
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHH-HHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMA-DIV 1108 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~-evl 1108 (1133)
. ....+++.+|++.||++||++. ++.
T Consensus 220 ~------~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 220 T------KESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred C------HHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 1122788899999999999985 555
No 141
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-34 Score=328.06 Aligned_cols=240 Identities=23% Similarity=0.362 Sum_probs=188.9
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
+.||+|+||.||+|++. +++.||||++.... ...+.+..|..++... +||||+++++++...+ ..++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~-~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE-NLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC-EEEEEEeCCC
Confidence 46999999999999875 47899999986532 2234566788888765 8999999999998764 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++.... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~ 151 (316)
T cd05619 80 GGDLMFHIQSCH-----KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG---DA 151 (316)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---CC
Confidence 999999997632 3788899999999999999999999999999999999999999999999998643211 11
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+... ...+ +. . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~----~~-~-----~ 219 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NPCY----PR-W-----L 219 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCC----Cc-c-----C
Confidence 223456899999999999889999999999999999999999999766655544443221 0000 00 0 0
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHH-HHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMA-DIVF 1109 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~-evl~ 1109 (1133)
. ....+++.+|++.||++||++. ++.+
T Consensus 220 ~------~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 220 T------REAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred C------HHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 0 1123788899999999999997 5543
No 142
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.9e-34 Score=316.22 Aligned_cols=254 Identities=22% Similarity=0.409 Sum_probs=204.4
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.++|++.+.||+|+||.||+|...++..+|+|.+..+....+.+.+|++++++++|+|++++++++.. ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC--CCeEEEEEeC
Confidence 45789999999999999999988778889999987665556789999999999999999999999876 4458999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++.... ....++..+..++.|++.|++|||+.|++||||||+||+++.++.++++|||.+....... .
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--~ 157 (260)
T cd05073 83 AKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE--Y 157 (260)
T ss_pred CCCcHHHHHHhCC---ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCC--c
Confidence 9999999997642 2347888999999999999999999999999999999999999999999999986542211 1
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......++..|+|||++.+..++.++|+|||||++|++++ |+.||...+..+....+.... ..+.. .
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~----~~~~~----~--- 226 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY----RMPRP----E--- 226 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC----CCCCc----c---
Confidence 11222345678999999988889999999999999999999 999997665555444332211 00000 0
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
... ....+++.+|++.+|++||++.++.+.|+.
T Consensus 227 ~~~------~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 227 NCP------EELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred cCC------HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 000 112378899999999999999999999975
No 143
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.3e-34 Score=321.51 Aligned_cols=266 Identities=22% Similarity=0.385 Sum_probs=205.0
Q ss_pred hcCCCcccccccccceeEEEEEECC-----------------ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeee
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD-----------------GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTV 896 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~ 896 (1133)
.++|++.+.||+|+||.||+|.... +..||+|++..... ..+.+.+|++++++++|||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4579999999999999999996642 25689999875432 2467889999999999999999
Q ss_pred EEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCC------CCCCChHHHHHHHHHHHHHHHHHhcCCceecccCcccee
Q 001171 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQD------GHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVL 970 (1133)
Q Consensus 897 l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIl 970 (1133)
+++++...+ ..++||||+++++|.+++....... ...+++..++.++.|++.|++|||+.+|+||||||+||+
T Consensus 84 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 84 LLGVCTVDP-PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEecCC-CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 999998764 4599999999999999998755222 225899999999999999999999999999999999999
Q ss_pred eCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh--CCCCCccCChhh
Q 001171 971 FDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT--GRKPVMFTQDED 1048 (1133)
Q Consensus 971 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t--g~~Pf~~~~~~~ 1048 (1133)
++.++.++++|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLYSSDY-YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ 241 (296)
T ss_pred ecCCCceEEccccceeecccCcc-eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence 99999999999999865432211 112233456778999999988889999999999999999998 778887655555
Q ss_pred HHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1049 IVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
....+.............+. +.. .. ....+++.+|++.||++||++.||++.|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~-----~~~---~~--~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 242 VIENAGHFFRDDGRQIYLPR-----PPN---CP--KDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHHHHhccccccccccCCC-----ccC---CC--HHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 55444433222111111110 000 00 123378999999999999999999998863
No 144
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.7e-35 Score=336.43 Aligned_cols=252 Identities=22% Similarity=0.349 Sum_probs=196.9
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+|..+ +|+.||+|++..... ..+.+.+|+++++.++||||+++++++... ...++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~-~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK-DNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC-CeEEEE
Confidence 36889999999999999999765 689999999975332 345688999999999999999999988775 456999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++.+.. ..+++..+..++.||+.||+|||+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 80 MEYQPGGDLLSLLNRYE----DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred ECCCCCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 99999999999998742 24889999999999999999999999999999999999999999999999998754322
Q ss_pred CCCCCCCCCCCCCCCccCccccC------CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAAS------TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISEL 1065 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1133)
.. .......||+.|+|||++. +..++.++||||+||++|||++|+.||...........+... ......
T Consensus 156 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~---~~~~~~ 230 (330)
T cd05601 156 KM--VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF---QRFLKF 230 (330)
T ss_pred Cc--eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC---CCccCC
Confidence 11 1223357899999999986 456789999999999999999999999765544433332221 111111
Q ss_pred ccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1066 LEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+. ..... ...+++.+|+. +|.+||++.+++++
T Consensus 231 ~~~-----~~~~~------~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 231 PED-----PKVSS------DFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCC-----CCCCH------HHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000 00011 12267788997 99999999999864
No 145
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.8e-34 Score=350.26 Aligned_cols=264 Identities=18% Similarity=0.284 Sum_probs=200.0
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.++||+|+||.||+|.+. +|+.||+|++..... ..+.+.+|++++++++||||+++++++... +..++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~-~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG-DPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC-CEEEEE
Confidence 57999999999999999999775 589999999865322 135788999999999999999999998876 455999
Q ss_pred EeccCCCCHHHHHHhhccC------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 912 YDYMPNGNLATLLQEASHQ------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
|||+++|+|.+++...... .....++..+..++.||++||+|||++||+||||||+||+++.++.++++|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999998753211 1123567778899999999999999999999999999999999999999999999
Q ss_pred cccccCCCC---------------CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHH
Q 001171 986 RLAIATPAE---------------ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050 (1133)
Q Consensus 986 ~~~~~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~ 1050 (1133)
+........ .......+||+.|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 755211100 01112356999999999999999999999999999999999999999754433221
Q ss_pred HHHHHHhhhccccccccCCcCCCCCCChhHHHHH-HhHhhhhccCCCCCCCCC-CHHHHHHHHhcCcCC
Q 001171 1051 KWVKKQLQRGQISELLEPGLLELDPESSEWEEFL-LGVKVGLLCTAPDPLDRP-SMADIVFMLEGCRVG 1117 (1133)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~Cl~~dP~~RP-s~~evl~~Le~~~~~ 1117 (1133)
.. ..... ..+. .+ ..... ...+++.+|++.||++|| +++++++.|+.....
T Consensus 241 ~~--~~i~~--P~~~-~p-----------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 241 YR--DVILS--PIEV-AP-----------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hh--hhccC--hhhc-cc-----------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 11 00000 0000 00 00111 112788899999999995 677787888776543
No 146
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-35 Score=341.86 Aligned_cols=262 Identities=19% Similarity=0.284 Sum_probs=202.2
Q ss_pred hcCCCcccccccccceeEEEEEECCc-eEEEEEEcccC-CcCHHHHHHHHHHHhhcc-CCCeeeEEE-EEeC---C--CC
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDG-MVLSIRRLRDG-TIDENTFRKEAEALGKVK-HRNLTVLRG-YYAG---P--PD 906 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g-~~vavK~~~~~-~~~~~~~~~E~~~l~~l~-hpniv~l~~-~~~~---~--~~ 906 (1133)
..++++.++|.+|||+.||.|....+ ..||+|++... +..-+.+.+|+++|++|+ |||||.+++ .... . ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 44678999999999999999988765 99999998643 333467889999999997 999999999 3321 1 23
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCC--ceecccCccceeeCCCCceEEeccCc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD--MVHGDIKPQNVLFDADFEAHLSEFGL 984 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~ 984 (1133)
..++.||||.+|.|-++|...... .+++.++++|++++++|+++||... |||||||-+|||++.+++.||||||.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~---~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQT---RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhc---cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 447999999999999999875432 2899999999999999999999887 99999999999999999999999999
Q ss_pred ccccccCCCCCC------CCCCCCCCCCccCcccc---CCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHH
Q 001171 985 DRLAIATPAEAS------SSTTPIGSLGYVSPEAA---STGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055 (1133)
Q Consensus 985 a~~~~~~~~~~~------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~ 1055 (1133)
|.-......... .......|+.|+|||++ .+...++|+|||++||+||-|+....||+....-.
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la------- 265 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA------- 265 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee-------
Confidence 854333221110 11234689999999997 46678999999999999999999999996443221
Q ss_pred HhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCC
Q 001171 1056 QLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDM 1120 (1133)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~ 1120 (1133)
+++..+ .+++. ..+.+.. .+||..||++||++||++.+|++.+-++...+-.
T Consensus 266 ---------Ilng~Y-~~P~~-p~ys~~l--~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~ 317 (738)
T KOG1989|consen 266 ---------ILNGNY-SFPPF-PNYSDRL--KDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP 317 (738)
T ss_pred ---------EEeccc-cCCCC-ccHHHHH--HHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence 111111 22221 1122222 2799999999999999999999998776655433
No 147
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.2e-34 Score=321.03 Aligned_cols=263 Identities=21% Similarity=0.354 Sum_probs=207.4
Q ss_pred hcCCCcccccccccceeEEEEEECC-----ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD-----GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 908 (1133)
.++|++.++||+|+||.||+|.+.+ +..|++|++..... ..+.+.+|++++++++|||++++++++...+...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678999999999999999998765 78899999864322 2456789999999999999999999987765666
Q ss_pred EEEEeccCCCCHHHHHHhhccC---CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQ---DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
++++||+++++|.+++...... ....+++..+..++.|++.|++|||+.+++||||||+||++++++.+|++|||++
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~ 164 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALS 164 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCc
Confidence 9999999999999999765322 1245889999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
+........ .......++..|+|||++.+..++.++|||||||++||+++ |+.||......+...++..... +..
T Consensus 165 ~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~ 240 (280)
T cd05043 165 RDLFPMDYH-CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYR---LAQ 240 (280)
T ss_pred ccccCCceE-EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCC---CCC
Confidence 754332211 11122345678999999988889999999999999999999 9999976655554444332110 000
Q ss_pred cccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1065 LLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
. .. .. + ...+++.+||..||++||++.|+++.|+.+..
T Consensus 241 --~---~~---~~----~--~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 241 --P---IN---CP----D--ELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred --C---Cc---CC----H--HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0 00 00 1 12378999999999999999999999987653
No 148
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.8e-35 Score=333.25 Aligned_cols=241 Identities=21% Similarity=0.334 Sum_probs=191.6
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
+.||+|+||.||+|..+ +|+.||+|.+.... .....+.+|+++++.++||||+++++++... ...++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~-~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH-DRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC-CEEEEEEeCCCC
Confidence 46999999999999764 68999999986432 1235667899999999999999999988776 455999999999
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
|+|.+++...+ .+++..+..++.||+.||+|||+ .||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~---~~ 151 (325)
T cd05594 80 GELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD---GA 151 (325)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---Cc
Confidence 99999887633 37899999999999999999997 79999999999999999999999999998643221 11
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.....+.....+... ...++..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~---------- 219 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTL---------- 219 (325)
T ss_pred ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC--CCCCCCCC----------
Confidence 223456999999999999889999999999999999999999999766554443333211 11111000
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
.. ...+++.+|++.||++|+ ++.+++++
T Consensus 220 ~~------~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 220 SP------EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CH------HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 01 123788899999999996 89999865
No 149
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3e-35 Score=322.89 Aligned_cols=257 Identities=22% Similarity=0.390 Sum_probs=203.9
Q ss_pred HhcCCCcccccccccceeEEEEEEC---Cc--eEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCc
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ---DG--MVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~g--~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 907 (1133)
.++..+..+.||+|.||.||+|.+. .| -.||||.-+.+. .+.+.|.+|+.+|+.++|||||+++|+|.+. .
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~--P 464 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ--P 464 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc--c
Confidence 3445567789999999999999663 23 468888876532 2357899999999999999999999999875 3
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.|+|||.++-|.|..+++..+. .++......+++||+.||+|||+..+|||||.++|||+....-+|++|||++|.
T Consensus 465 ~WivmEL~~~GELr~yLq~nk~----sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNKD----SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred eeEEEecccchhHHHHHHhccc----cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhh
Confidence 5999999999999999998654 388889999999999999999999999999999999999999999999999997
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
..+... .......-...|||||.+.-++++.++|||.|||++||++. |..||.+....++.-.+..+ .+...++.+
T Consensus 541 ~ed~~y--YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG-eRlP~P~nC 617 (974)
T KOG4257|consen 541 LEDDAY--YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG-ERLPCPPNC 617 (974)
T ss_pred ccccch--hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC-CCCCCCCCC
Confidence 754322 22223345568999999999999999999999999999988 99999765544433322221 111122222
Q ss_pred cCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1067 EPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
.+ .-+ .++.+||++||.+||.+.|+...|.++..
T Consensus 618 Pp------------~LY----slmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 618 PP------------ALY----SLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred Ch------------HHH----HHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 22 222 67889999999999999999988876554
No 150
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-34 Score=320.88 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=200.0
Q ss_pred CCCcccccccccceeEEEEEEC------CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
+|.+.+.||+|+||.||+|.+. .+..||+|++...... .+.+.+|+.++++++||||+++++++..... .+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~-~~ 84 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP-LS 84 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc-eE
Confidence 4778899999999999999763 2578999999754332 3568899999999999999999999987644 58
Q ss_pred EEEeccCCCCHHHHHHhhcc-----------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceE
Q 001171 910 LVYDYMPNGNLATLLQEASH-----------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 978 (1133)
+++||+++++|.+++..... .....+++..+..++.|++.|++|+|++||+||||||+||++++++.+|
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~k 164 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVK 164 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceE
Confidence 99999999999999864211 1123478888999999999999999999999999999999999999999
Q ss_pred EeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHh
Q 001171 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQL 1057 (1133)
Q Consensus 979 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~ 1057 (1133)
++|||+++....... ........+++.|+|||++.++.++.++||||+||++|||++ |..||......+..+.+...
T Consensus 165 l~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~- 242 (283)
T cd05091 165 ISDLGLFREVYAADY-YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR- 242 (283)
T ss_pred ecccccccccccchh-eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-
Confidence 999999875432211 112233456779999999988889999999999999999998 88898766555544443322
Q ss_pred hhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1058 QRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
..... +.. .... ..+++.+||+.+|++||+++||++.|++
T Consensus 243 ---~~~~~--------~~~---~~~~--~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 243 ---QVLPC--------PDD---CPAW--VYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred ---CcCCC--------CCC---CCHH--HHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11110 000 1111 2278899999999999999999999986
No 151
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.8e-34 Score=321.84 Aligned_cols=260 Identities=24% Similarity=0.338 Sum_probs=202.2
Q ss_pred CCCcccccccccceeEEEEEEC------CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
+|++.+.||+|+||.||+|... ....+++|.+..... ..+.+.+|++++++++||||+++++.+..... .+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGP-LL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCC-cE
Confidence 4788899999999999999753 235788888865432 23578899999999999999999999877644 58
Q ss_pred EEEeccCCCCHHHHHHhhccC-------------------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCcccee
Q 001171 910 LVYDYMPNGNLATLLQEASHQ-------------------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVL 970 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIl 970 (1133)
+||||+++|+|.+++...... ....+++..+..++.|++.|++|||+.+|+||||||+||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 999999999999998753211 1234788999999999999999999999999999999999
Q ss_pred eCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhH
Q 001171 971 FDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049 (1133)
Q Consensus 971 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~ 1049 (1133)
+++++.++|+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||.....+.+
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~ 238 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSY-VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL 238 (290)
T ss_pred EcCCCcEEeccccccccccCccch-hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 999999999999998754332211 11223345678999999988889999999999999999998 9999976665555
Q ss_pred HHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1050 VKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
...+.+..... .. .... ....+++.+|++.+|++||+++|+++.|+++..
T Consensus 239 ~~~~~~~~~~~-----~~------~~~~------~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 239 FNLLKTGYRME-----RP------ENCS------EEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHhCCCCCC-----CC------CCCC------HHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 54433221100 00 0000 112378899999999999999999999987543
No 152
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.4e-34 Score=319.36 Aligned_cols=254 Identities=23% Similarity=0.382 Sum_probs=198.3
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCC-----CCc
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAGP-----PDV 907 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~-----~~~ 907 (1133)
+++.|++.+.||+|+||.||+|... +++.||+|++.........+.+|+++++++ +|||++++++++... ...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 5667889999999999999999775 588999999976655667889999999999 799999999998643 234
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.++||||+++++|.+++.... ...+++..+..++.|++.|++|||+++|+||||||+||++++++.++++|||+++.
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 689999999999999998643 23488999999999999999999999999999999999999999999999999865
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccC-----CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAAS-----TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI 1062 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 1062 (1133)
.... ........|+..|+|||++. +..++.++||||+||++|||++|+.||.............. ...
T Consensus 161 ~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~----~~~ 233 (272)
T cd06637 161 LDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR----NPA 233 (272)
T ss_pred cccc---cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc----CCC
Confidence 4221 12233456889999999985 34578899999999999999999999965433222211111 100
Q ss_pred cccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1063 SELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
....+. .+.. ...+++.+||..||.+||++.|++++
T Consensus 234 ~~~~~~----------~~~~--~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 234 PRLKSK----------KWSK--KFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CCCCCC----------CcCH--HHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 011000 0011 12378899999999999999999863
No 153
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3e-34 Score=322.31 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=204.0
Q ss_pred HhcCCCcccccccccceeEEEEEECC------ceEEEEEEcccCCcC--HHHHHHHHHHHhhc-cCCCeeeEEEEEeCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQD------GMVLSIRRLRDGTID--ENTFRKEAEALGKV-KHRNLTVLRGYYAGPP 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 905 (1133)
..++|++.+.||+|+||.||+|.+.. ...+|+|.+...... ...+.+|+++++++ +||||+++++++....
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 44578999999999999999997642 368999998754322 34678899999999 8999999999987764
Q ss_pred CcEEEEEeccCCCCHHHHHHhhcc-----------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASH-----------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD 974 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~ 974 (1133)
..++||||+++|+|.++++.... .....+++..+..++.|++.|++|||+.+|+||||||+||+++.+
T Consensus 90 -~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 90 -PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED 168 (293)
T ss_pred -CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence 45999999999999999976421 223458899999999999999999999999999999999999999
Q ss_pred CceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHH
Q 001171 975 FEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWV 1053 (1133)
Q Consensus 975 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~ 1053 (1133)
+.+|++|||+++....... ........++..|+|||++.+..++.++|||||||++||+++ |..||......+....+
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 247 (293)
T cd05053 169 HVMKIADFGLARDIHHIDY-YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL 247 (293)
T ss_pred CeEEeCccccccccccccc-eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence 9999999999875432211 111122335678999999988889999999999999999998 99999766555544433
Q ss_pred HHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1054 KKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
.... ... .+... .....+++.+|+..||++|||+.|+++.|+.+.
T Consensus 248 ~~~~----~~~--------~~~~~-----~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 248 KEGY----RME--------KPQNC-----TQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HcCC----cCC--------CCCCC-----CHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 2211 000 00000 112237899999999999999999999998753
No 154
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.2e-34 Score=319.29 Aligned_cols=259 Identities=21% Similarity=0.356 Sum_probs=203.9
Q ss_pred hcCCCcccccccccceeEEEEEECC------ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD------GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 907 (1133)
.++|++.+.||+|+||.||+|..+. +..||+|.+..... ....+.+|++++++++||||+++++++.... .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ-P 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC-C
Confidence 4578899999999999999997642 47899999865432 2356889999999999999999999998764 4
Q ss_pred EEEEEeccCCCCHHHHHHhhccC-----CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEecc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQ-----DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEF 982 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df 982 (1133)
.++||||+++|+|.+++...... ....+++..+..++.||+.|++|||+.+|+||||||+||+++.++.+|++||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df 163 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence 59999999999999999764321 1234788899999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcc
Q 001171 983 GLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQ 1061 (1133)
Q Consensus 983 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~ 1061 (1133)
|+++....... ........++..|+|||.+.++.++.++|||||||++||+++ |..||...+..+....+.. ..
T Consensus 164 g~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~----~~ 238 (277)
T cd05032 164 GMTRDIYETDY-YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID----GG 238 (277)
T ss_pred ccchhhccCcc-cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc----CC
Confidence 99875433221 112233456789999999988889999999999999999998 9999976666555544431 11
Q ss_pred ccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1062 ISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.....+ .. .....+++.+||+.+|++||++.|+++.|+.
T Consensus 239 ~~~~~~--------~~-----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 239 HLDLPE--------NC-----PDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCCCCC--------CC-----CHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111110 00 0122378999999999999999999999864
No 155
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7e-35 Score=339.07 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=193.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
.+|++.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|++++++++||||+++++.+.+. +..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~-~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK-DNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CEEEEE
Confidence 36899999999999999999765 58999999986422 2245678999999999999999999999876 456999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++.+.+ .+++.....++.||+.||+|||++||+||||||+||+++.++.+||+|||+|......
T Consensus 80 ~E~~~~g~L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 80 MDYIPGGDMMSLLIRLG-----IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred EeCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 99999999999997643 3778888889999999999999999999999999999999999999999997422100
Q ss_pred CC----------------------------------------CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHH
Q 001171 992 PA----------------------------------------EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVL 1031 (1133)
Q Consensus 992 ~~----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il 1031 (1133)
.. ........+||+.|+|||++.+..++.++||||+||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 00 00011234799999999999998999999999999999
Q ss_pred HHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCC---CHHHHH
Q 001171 1032 LEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRP---SMADIV 1108 (1133)
Q Consensus 1032 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP---s~~evl 1108 (1133)
|||++|+.||......+....+...... ...+... .... ...+++.+|+ .+|.+|+ ++.|++
T Consensus 235 yell~G~~Pf~~~~~~~~~~~i~~~~~~-----~~~~~~~---~~s~------~~~~li~~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 235 YEMLVGQPPFLADTPAETQLKVINWETT-----LHIPSQA---KLSR------EASDLILRLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred eehhhCCCCCCCCCHHHHHHHHhccCcc-----ccCCCCC---CCCH------HHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence 9999999999766654433332211000 0000000 0011 1125666665 5999999 899998
Q ss_pred HH
Q 001171 1109 FM 1110 (1133)
Q Consensus 1109 ~~ 1110 (1133)
++
T Consensus 300 ~h 301 (376)
T cd05598 300 AH 301 (376)
T ss_pred CC
Confidence 76
No 156
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4e-34 Score=313.65 Aligned_cols=248 Identities=22% Similarity=0.321 Sum_probs=192.1
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGN 919 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gs 919 (1133)
++||+|+||.||+|.+. +++.||+|.+..... ....+.+|++++++++||||+++++++.... ..++||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-PIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-CeEEEEeeccCCc
Confidence 46999999999999774 689999998764322 2457899999999999999999999987764 4599999999999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCC
Q 001171 920 LATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999 (1133)
Q Consensus 920 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 999 (1133)
|.+++...+ ..+++..++.++.|++.||+|||+.||+||||||+||+++.++.+|++|||+++....... .....
T Consensus 80 L~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~ 154 (252)
T cd05084 80 FLTFLRTEG----PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-ASTGG 154 (252)
T ss_pred HHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc-cccCC
Confidence 999997532 2478999999999999999999999999999999999999999999999999864321110 11111
Q ss_pred CCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCCh
Q 001171 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESS 1078 (1133)
Q Consensus 1000 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1133)
...++..|+|||.+.++.++.++||||+||++|||++ |..||...........+.... ... .. ..
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~----~~~-~~-------~~-- 220 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV----RLP-CP-------EL-- 220 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC----CCC-Cc-------cc--
Confidence 1223457999999988889999999999999999998 888986555443333222110 000 00 00
Q ss_pred hHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1079 EWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1079 ~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.. ....+++.+|++.+|++||++.|+.+.|+.
T Consensus 221 -~~--~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 221 -CP--DAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred -CC--HHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 00 122378999999999999999999998863
No 157
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.9e-34 Score=319.09 Aligned_cols=249 Identities=22% Similarity=0.295 Sum_probs=190.0
Q ss_pred cccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCC
Q 001171 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGN 919 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gs 919 (1133)
||+|+||.||+++.+ +|+.||+|++..... ..+.+..|++++++++||||+++++++... ...++||||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~-~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK-THLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC-CeEEEEEecCCCCC
Confidence 799999999999765 589999999864221 234556799999999999999999998776 45599999999999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCC
Q 001171 920 LATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999 (1133)
Q Consensus 920 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 999 (1133)
|.+++..... ..+++..+..++.||+.|++|||+.||+||||||+||+++.++.++|+|||++...... ....
T Consensus 80 L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~----~~~~ 152 (277)
T cd05607 80 LKYHIYNVGE---RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG----KTIT 152 (277)
T ss_pred HHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC----ceee
Confidence 9998865432 33788888999999999999999999999999999999999999999999998654221 1123
Q ss_pred CCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1000 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
...|+..|+|||++.+..++.++||||+||++|||++|+.||...........+.+........ .....
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------- 221 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQN---------- 221 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-ccccc----------
Confidence 3468899999999988889999999999999999999999996543221111221211111110 00000
Q ss_pred HHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
... ...+++.+|++.||++||+++|+++.....
T Consensus 222 ~~~--~~~~li~~~L~~~P~~R~~~~~~~~~~~~h 254 (277)
T cd05607 222 FTE--ESKDICRLFLAKKPEDRLGSREKNDDPRKH 254 (277)
T ss_pred CCH--HHHHHHHHHhccCHhhCCCCccchhhhhcC
Confidence 001 123789999999999999997776555443
No 158
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=4.2e-37 Score=336.62 Aligned_cols=366 Identities=28% Similarity=0.411 Sum_probs=290.0
Q ss_pred ccccEEeccCCcccccccCCCCCccccccEEeccCCcccccCCchhhcccccceeeccCceeecccCcccCCCCCCcEEE
Q 001171 290 SSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLR 369 (1133)
Q Consensus 290 ~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 369 (1133)
+-.+-+|+++|.|+|.-.|.+...+++++.|-|...++..+ |+.++.+.+|+.|.+++|++. .+.+.+..|++|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~v-PeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQV-PEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhC-hHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 44566777778777766566666777888888888888887 889999999999999999998 5667888999999999
Q ss_pred ccCCcccc-cCchhhccCCCccEEEccCCcccccCCCccCCCCCCcEEEccCCcCccccCccccCccccceeeccccccc
Q 001171 370 VANNSLSG-LVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIR 448 (1133)
Q Consensus 370 L~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~ 448 (1133)
+++|++.. -+|+.+.++..|..||||+|+++ .+|..+...+++.+|+|++|+|..+.-..|.+++.|-+||||+|++.
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh
Confidence 99999864 35888889999999999999998 78999999999999999999999776677889999999999999998
Q ss_pred ccCChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEEcccCCCc-cccCCCcCCcccccEEeccccCCCCCCChhc
Q 001171 449 GNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFS-GKIPGSIGSLMRLTTLDLSNQNLSGELPIEL 527 (1133)
Q Consensus 449 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 527 (1133)
..|..+.++..|++|+|++|.+...--..+..++.|.+|.+++.+-+ ..+|.++..+.+|..+|+|.|++. .+|+++
T Consensus 164 -~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecl 241 (1255)
T KOG0444|consen 164 -MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECL 241 (1255)
T ss_pred -hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHH
Confidence 67888899999999999999886433444556667777777776543 346777777777777777777776 667776
Q ss_pred cCCCCCcEeeccCCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccccceeecccCccCCCCCccccCCCCccE
Q 001171 528 FGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEV 607 (1133)
Q Consensus 528 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 607 (1133)
.++++|+.|+|++|+|+ .+....+...+|++|+||+|+++ .+|+.+.++++|+.
T Consensus 242 y~l~~LrrLNLS~N~it-------------------------eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~k 295 (1255)
T KOG0444|consen 242 YKLRNLRRLNLSGNKIT-------------------------ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTK 295 (1255)
T ss_pred hhhhhhheeccCcCcee-------------------------eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHH
Confidence 66666666666666665 22233445566677777777776 67777777777777
Q ss_pred EEecCCcccC-CCccccccccccCeeecCCCcccCcCchhhhccCCCcEEEeecCCCCccCCccccCccccccccccccc
Q 001171 608 LELRSNHFTG-NIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNR 686 (1133)
Q Consensus 608 L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 686 (1133)
|.+.+|+++- -+|..|+.+.+|+.+..++|.+. .+|..++.|.+|+.|.|++|++. .+|+.+.-|+.|+.|||..|.
T Consensus 296 Ly~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 296 LYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred HHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 7777777652 27888888888888888888887 78888888888888888888887 678888888888888888886
Q ss_pred cc
Q 001171 687 LS 688 (1133)
Q Consensus 687 l~ 688 (1133)
--
T Consensus 374 nL 375 (1255)
T KOG0444|consen 374 NL 375 (1255)
T ss_pred Cc
Confidence 54
No 159
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.7e-34 Score=328.38 Aligned_cols=245 Identities=23% Similarity=0.338 Sum_probs=193.5
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV 911 (1133)
+|++.+.||+|+||.||+|+.+ +++.||+|++.+... ..+.+..|.+++..+ +||+|+++++++... +..++|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM-DRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC-CEEEEE
Confidence 4788999999999999999776 578999999865321 234566788888877 588999999988776 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~E~~~~g~L~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 80 MEYVNGGDLMYQIQQVG-----RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred EcCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 99999999999987643 3788899999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...+.......+.... ..+
T Consensus 155 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~--~~~--------- 220 (323)
T cd05616 155 ---GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--VAY--------- 220 (323)
T ss_pred ---CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCC---------
Confidence 112234578999999999999999999999999999999999999998766655554443210 000
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCH-----HHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSM-----ADIVF 1109 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~-----~evl~ 1109 (1133)
+.... ....+++.+|++.||.+|++. .++.+
T Consensus 221 --p~~~s-----~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 221 --PKSMS-----KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred --CCcCC-----HHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 00000 112378899999999999974 56654
No 160
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.2e-34 Score=329.56 Aligned_cols=265 Identities=20% Similarity=0.256 Sum_probs=195.7
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC-----
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPP----- 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 905 (1133)
..++|++.+.||+|+||.||+|... .|+.||+|++.... .....+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999764 58999999986432 22456788999999999999999999886432
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
...++||||+++ ++.+.+.. .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 235899999964 66666642 2678888899999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc----
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ---- 1061 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---- 1061 (1133)
+.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+.+......
T Consensus 171 ~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 171 RTACT----NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred ccccc----CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 64321 1122345789999999999999999999999999999999999999976654433322222111000
Q ss_pred ------cccccc--CCcCCC-----------CCCChhH-HHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1062 ------ISELLE--PGLLEL-----------DPESSEW-EEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1062 ------~~~~~~--~~~~~~-----------~~~~~~~-~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
...... +..... +...... ..-....+++.+|++.||++|||+.|++++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 000000 000000 0000000 0001223889999999999999999999863
No 161
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.3e-34 Score=323.63 Aligned_cols=263 Identities=22% Similarity=0.344 Sum_probs=201.6
Q ss_pred cCCCcccccccccceeEEEEEECC-c--eEEEEEEcccCCc--CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQD-G--MVLSIRRLRDGTI--DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~-g--~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~l 910 (1133)
++|++.++||+|+||.||+|..++ + ..+++|.++.... ..+.+.+|+++++++ +||||+++++++.... ..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG-YLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC-cceE
Confidence 578999999999999999997753 3 3478888763222 235788999999999 7999999999987764 4599
Q ss_pred EEeccCCCCHHHHHHhhccC-----------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEE
Q 001171 911 VYDYMPNGNLATLLQEASHQ-----------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHL 979 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl 979 (1133)
||||+++++|.++++..... ....+++..+..++.|++.|++|||++||+||||||+||++++++.+||
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl 160 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKI 160 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEE
Confidence 99999999999999764321 1134788899999999999999999999999999999999999999999
Q ss_pred eccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhh
Q 001171 980 SEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQ 1058 (1133)
Q Consensus 980 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~ 1058 (1133)
+|||++..... .........+..|+|||++.+..++.++|||||||++|||++ |+.||......+....+.+...
T Consensus 161 ~dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~ 236 (297)
T cd05089 161 ADFGLSRGEEV----YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236 (297)
T ss_pred CCcCCCccccc----eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence 99999853211 111112233457999999988889999999999999999997 9999976665554433322110
Q ss_pred hccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCCC
Q 001171 1059 RGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDMP 1121 (1133)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~~ 1121 (1133)
. . .. .. .. ....+++.+||+.+|.+||+++++++.|+.......+.
T Consensus 237 ~----~-~~-------~~---~~--~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~ 282 (297)
T cd05089 237 M----E-KP-------RN---CD--DEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAY 282 (297)
T ss_pred C----C-CC-------CC---CC--HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccc
Confidence 0 0 00 00 00 11237899999999999999999999998877655443
No 162
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.5e-34 Score=336.99 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=191.2
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.|+..++||+|+||.||+|+.. +++.||+|++..... ..+.+.+|++++++++||||+++++.+.+. ...++||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~-~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK-DNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC-CEEEEEE
Confidence 5889999999999999999775 588999999864321 235678899999999999999999999876 4569999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++|+|.+++.+.+ .+++.....++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~-----~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 81 DYIPGGDMMSLLIRMG-----IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred eCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 9999999999997643 37788888999999999999999999999999999999999999999999975321100
Q ss_pred C--------------------------------------------CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHH
Q 001171 993 A--------------------------------------------EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFG 1028 (1133)
Q Consensus 993 ~--------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG 1028 (1133)
. ........+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0 00001234699999999999988999999999999
Q ss_pred HHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCC---HH
Q 001171 1029 IVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS---MA 1105 (1133)
Q Consensus 1029 ~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs---~~ 1105 (1133)
|++|||++|+.||...+..+....+........ .+.... .. .+ ..+++.+|+ .+|++|++ +.
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-----~p~~~~---~s---~~---~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKVINWQTSLH-----IPPQAK---LS---PE---ASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcC-----CCCccc---CC---HH---HHHHHHHHc-cCHhHcCCCCCHH
Confidence 999999999999976655443333222110000 000000 01 11 124555554 59999987 88
Q ss_pred HHHHH
Q 001171 1106 DIVFM 1110 (1133)
Q Consensus 1106 evl~~ 1110 (1133)
|++++
T Consensus 301 ei~~h 305 (382)
T cd05625 301 EIKAH 305 (382)
T ss_pred HHhcC
Confidence 88754
No 163
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.9e-34 Score=317.78 Aligned_cols=260 Identities=18% Similarity=0.313 Sum_probs=201.1
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.++||+|+||.||+|+.. +++.||||++.... .....+.+|++++++++|||++++++++.... ..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN-ELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC-eEEEE
Confidence 57899999999999999999764 68999999875321 12346788999999999999999999988764 45899
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++...... ...+++..+..++.|++.|++|||+++++||||||+||+++.++.++++|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQ-KRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEecCCCcHHHHHHHhhhc-cCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 9999999999998754322 234788889999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
. .......|+..|+|||++.+..++.++|+||+|+++|||++|+.||...... ..... ........+....
T Consensus 160 ~---~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-~~~~~-~~~~~~~~~~~~~---- 230 (267)
T cd08228 160 T---TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LFSLC-QKIEQCDYPPLPT---- 230 (267)
T ss_pred h---HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-HHHHH-HHHhcCCCCCCCh----
Confidence 1 1122346888999999998888899999999999999999999998643221 11111 1111111111100
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
.... ....+++.+||+.+|++||++.||++.+++++
T Consensus 231 ------~~~~--~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 231 ------EHYS--EKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ------hhcC--HHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0000 11237899999999999999999999998764
No 164
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.2e-34 Score=314.32 Aligned_cols=252 Identities=24% Similarity=0.446 Sum_probs=203.0
Q ss_pred cCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
.+|++.+.||+|+||.||+|.+.++..+|+|.+.......+.+.+|++++++++||+++++++++.... ..++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERS-PICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCC-ceEEEEEcCC
Confidence 367888999999999999998877889999999876666788999999999999999999999987664 4589999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+++|.+++.... ..+++..+..++.+++.|++|||+.+++||||||+||+++.++.++++|||.++....... .
T Consensus 83 ~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~ 156 (256)
T cd05112 83 HGCLSDYLRAQR----GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--T 156 (256)
T ss_pred CCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcc--c
Confidence 999999987533 2378889999999999999999999999999999999999999999999999865432111 1
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
......++..|+|||++.++.++.++||||+|+++|||++ |+.||...........+.+..+ ...+..
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~----- 225 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFR------LYKPRL----- 225 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCC------CCCCCC-----
Confidence 1122335678999999988889999999999999999998 9999976665554444322110 001111
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
.. ....+++.+||+.+|++||++.|++++|.
T Consensus 226 ~~------~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 226 AS------QSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CC------HHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 00 12237899999999999999999999873
No 165
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=8.4e-34 Score=318.95 Aligned_cols=266 Identities=21% Similarity=0.354 Sum_probs=202.1
Q ss_pred hcCCCcccccccccceeEEEEEEC-----------------CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeee
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-----------------DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTV 896 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~ 896 (1133)
.++|++.++||+|+||.||++.+. ++..||+|++..... ..+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 357999999999999999998543 245789999875432 2357889999999999999999
Q ss_pred EEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCC------CCCCChHHHHHHHHHHHHHHHHHhcCCceecccCcccee
Q 001171 897 LRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQD------GHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVL 970 (1133)
Q Consensus 897 l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIl 970 (1133)
+++++..... .++||||+++|+|.+++....... ...+++..+..++.|++.|++|||+.||+||||||+||+
T Consensus 84 ~~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 84 LLAVCITSDP-LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEecCCc-cEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 9999987644 599999999999999998754221 134778889999999999999999999999999999999
Q ss_pred eCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh--CCCCCccCChhh
Q 001171 971 FDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT--GRKPVMFTQDED 1048 (1133)
Q Consensus 971 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t--g~~Pf~~~~~~~ 1048 (1133)
++.++.++++|||+++....... ........++..|+|||+..++.++.++|||||||++|||++ |..||......+
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EcCCCCEEeccCcccccccCCcc-eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999999875432211 111222345678999999888889999999999999999998 778887655555
Q ss_pred HHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1049 IVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.................... +.. .. ....+++.+||+.||++||++.||++.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~-----~~~---~~--~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 VIENTGEFFRDQGRQVYLPK-----PAL---CP--DSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHhhccccccCCC-----CCC---CC--HHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 44433332221111111100 000 01 122378999999999999999999999863
No 166
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-35 Score=313.62 Aligned_cols=247 Identities=21% Similarity=0.314 Sum_probs=203.2
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
+-|.+.+.||+|-|++|-.|++- .|+.||||++-+... ....+.+|++.|+-++|||||++|.+...+ ...|+|.
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ-TKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ-TKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc-ceEEEEE
Confidence 45788899999999999999764 799999999965443 346788999999999999999999998776 4559999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceee-CCCCceEEeccCcccccccC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLF-DADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll-~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|.-.+|+|++|+.++. .-+.+....+++.||+.|+.|+|..+||||||||+||.+ ..-|-+|++|||++-.+.
T Consensus 97 ELGD~GDl~DyImKHe----~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-- 170 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHE----EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-- 170 (864)
T ss_pred EecCCchHHHHHHhhh----ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC--
Confidence 9999999999998753 348899999999999999999999999999999999876 567899999999985442
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCC-CCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPT-KEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
.+....+.+|+..|-|||++.+..|+ +++||||+|||+|.+++|++||...++.+....+..... -+..
T Consensus 171 --PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY------tvPs-- 240 (864)
T KOG4717|consen 171 --PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY------TVPS-- 240 (864)
T ss_pred --CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc------cCch--
Confidence 23456778999999999999998884 678999999999999999999987777666555443210 0000
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.--..+.++|..|+..||.+|.+.+||+..
T Consensus 241 ----------hvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 241 ----------HVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ----------hhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 001123389999999999999999999865
No 167
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3e-34 Score=342.63 Aligned_cols=264 Identities=17% Similarity=0.191 Sum_probs=196.8
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCC------CeeeEEEEEeCCCCc
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHR------NLTVLRGYYAGPPDV 907 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp------niv~l~~~~~~~~~~ 907 (1133)
..++|++.++||+|+||+||+|.+. .++.||||++.........+..|++++++++|. +++.+++++......
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 4678999999999999999999765 588999999965433345667788888887654 588899998876666
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCC-----------
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADF----------- 975 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~----------- 975 (1133)
.++|||++ +++|.+++.+.+ .+++..+..++.||+.||+|||+ .||+||||||+|||++.++
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKHG-----PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred EEEEEecc-CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 78999998 788999887642 38899999999999999999997 5999999999999998765
Q ss_pred -----ceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHH
Q 001171 976 -----EAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV 1050 (1133)
Q Consensus 976 -----~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~ 1050 (1133)
.+||+|||.+... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+..
T Consensus 281 ~~~~~~vkl~DfG~~~~~------~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~ 354 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDE------RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHL 354 (467)
T ss_pred CCCCceEEECCCCccccC------ccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 4899999987432 12233467999999999999999999999999999999999999999876655544
Q ss_pred HHHHHHhhhcc--c---------cccccCCc-CCCCCCCh---------hH---HHHHHhHhhhhccCCCCCCCCCCHHH
Q 001171 1051 KWVKKQLQRGQ--I---------SELLEPGL-LELDPESS---------EW---EEFLLGVKVGLLCTAPDPLDRPSMAD 1106 (1133)
Q Consensus 1051 ~~~~~~~~~~~--~---------~~~~~~~~-~~~~~~~~---------~~---~~~~~~~~li~~Cl~~dP~~RPs~~e 1106 (1133)
..+.+...... + .++.+... ........ .. .......+++.+||+.||++||+++|
T Consensus 355 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e 434 (467)
T PTZ00284 355 HLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQ 434 (467)
T ss_pred HHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHH
Confidence 44433221100 0 00000000 00000000 00 01122348999999999999999999
Q ss_pred HHHH
Q 001171 1107 IVFM 1110 (1133)
Q Consensus 1107 vl~~ 1110 (1133)
++++
T Consensus 435 ~L~H 438 (467)
T PTZ00284 435 MTTH 438 (467)
T ss_pred HhcC
Confidence 9974
No 168
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.3e-34 Score=319.97 Aligned_cols=262 Identities=19% Similarity=0.344 Sum_probs=201.7
Q ss_pred HhcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 906 (1133)
..++|++.++||+|+||.||+|..+ .+..||+|.+...... ...+.+|+.++++++||||+++++++....
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ- 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 4568999999999999999999653 2568999988644322 346788999999999999999999987764
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCC-----CCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEec
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQD-----GHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSE 981 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~D 981 (1133)
..++||||+++|+|.++++..+... ....++..+..++.|++.|++|||+++|+||||||+||++++++.++++|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence 4599999999999999998643211 12356677888999999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhc
Q 001171 982 FGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG 1060 (1133)
Q Consensus 982 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~ 1060 (1133)
||+++....... ........++..|+|||.+.++.++.++|||||||++|||++ |..||.....++....+.. +
T Consensus 163 fg~~~~~~~~~~-~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~----~ 237 (288)
T cd05061 163 FGMTRDIYETDY-YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD----G 237 (288)
T ss_pred CCcccccccccc-ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C
Confidence 999875432211 111222345678999999988889999999999999999998 7889976555544333221 1
Q ss_pred cccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1061 QISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
.... ..... . ....+++.+|++.||++||++.|+++.++...
T Consensus 238 ~~~~--------~~~~~---~--~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 238 GYLD--------QPDNC---P--ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCC--------CCCCC---C--HHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1111 00000 0 12237899999999999999999999998754
No 169
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=305.89 Aligned_cols=248 Identities=25% Similarity=0.355 Sum_probs=203.2
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
-|.+.+++|+|+||.||+|.++ .|.++|||+++.+. +-+++..|+.+|++.+.|++|+++|.|....+ .|+|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD-LWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD-LWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHcCCchhhhhhhhhccCCc-eEeehhhcC
Confidence 4678889999999999999776 59999999997643 56788999999999999999999998876544 599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
.|+..+.++... +.+.+.++..+.++.++||+|||...-+|||||+.|||++.+|++|++|||.|-..-+. -.
T Consensus 112 AGSiSDI~R~R~----K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT---MA 184 (502)
T KOG0574|consen 112 AGSISDIMRARR----KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT---MA 184 (502)
T ss_pred CCcHHHHHHHhc----CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhh---HH
Confidence 999999998643 55899999999999999999999999999999999999999999999999998544222 22
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
...+..||+.|||||++..-.|..++||||+|++..||..|++||....+...... ++.-..|.
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM---------IPT~PPPT------- 248 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM---------IPTKPPPT------- 248 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe---------ccCCCCCC-------
Confidence 34567899999999999999999999999999999999999999965433211000 11122222
Q ss_pred ChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHH
Q 001171 1077 SSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1077 ~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
....+++...+ +++.+|+-+.|++|.++.+++++
T Consensus 249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 23344555545 78889999999999999988765
No 170
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.6e-34 Score=321.25 Aligned_cols=269 Identities=22% Similarity=0.371 Sum_probs=196.0
Q ss_pred cCCCcccccccccceeEEEEEEC-----CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeC-CCCcEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-----DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAG-PPDVRL 909 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~~ 909 (1133)
..|++.+.||+|+||.||+|..+ +++.||+|++..... ..+.+.+|++++++++||||+++++++.. .....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888999999999999999742 578999999865432 24578899999999999999999998753 334568
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||+++|+|.+++...+ ..+++..+..++.|++.||+|||++||+||||||+||++++++.++++|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999997542 237899999999999999999999999999999999999999999999999987653
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhc----ccccc
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG----QISEL 1065 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~----~~~~~ 1065 (1133)
.............++..|+|||+..+..++.++|||||||++|||++|..|+..... .....+....... .+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhhhcccccccccchHHHHHH
Confidence 322111111122344569999999888899999999999999999998877643211 1111000000000 00000
Q ss_pred ccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1066 LEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
+........+. .... ...+++.+||+.+|++|||+.||++.|+.+
T Consensus 239 ~~~~~~~~~~~--~~~~--~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 239 LKNNGRLPAPP--GCPA--EIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HhcCCcCCCCC--CCCH--HHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000000 0001 123789999999999999999999999875
No 171
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.2e-34 Score=323.17 Aligned_cols=262 Identities=23% Similarity=0.371 Sum_probs=200.9
Q ss_pred hcCCCcccccccccceeEEEEEEC-Cce--EEEEEEcccCCc--CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGM--VLSIRRLRDGTI--DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~ 909 (1133)
.++|++.++||+|+||.||+|.++ ++. .+|+|++..... ..+.+.+|++++.++ +||||+++++++.... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~-~~~ 84 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-YLY 84 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC-Cce
Confidence 357889999999999999999875 343 467877754322 235788999999999 8999999999997764 459
Q ss_pred EEEeccCCCCHHHHHHhhccC-----------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceE
Q 001171 910 LVYDYMPNGNLATLLQEASHQ-----------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 978 (1133)
+||||+++++|.++++..+.. ....+++..+..++.|++.|++|||++||+||||||+||+++.++.+|
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEE
Confidence 999999999999999865421 123578899999999999999999999999999999999999999999
Q ss_pred EeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHh
Q 001171 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQL 1057 (1133)
Q Consensus 979 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~ 1057 (1133)
|+|||+++.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||......+....+....
T Consensus 165 l~dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 240 (303)
T cd05088 165 IADFGLSRGQEV----YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 240 (303)
T ss_pred eCccccCcccch----hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC
Confidence 999999853211 111122234668999999988888999999999999999998 999997655544433322110
Q ss_pred hhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCC
Q 001171 1058 QRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPD 1119 (1133)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~ 1119 (1133)
. .+ ..... . ....+++.+||+.+|++||++.++++.|+.......
T Consensus 241 ~----~~--------~~~~~---~--~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 241 R----LE--------KPLNC---D--DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred c----CC--------CCCCC---C--HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 0 00 00000 0 112378999999999999999999999887655443
No 172
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=7.8e-34 Score=322.68 Aligned_cols=200 Identities=21% Similarity=0.333 Sum_probs=161.9
Q ss_pred ccccccccceeEEEEEEC---CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEEEEEeccCC
Q 001171 842 ENVLSRGRYGLIFKASYQ---DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRLLVYDYMPN 917 (1133)
Q Consensus 842 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~lV~e~~~~ 917 (1133)
.++||+|+||+||+|+.+ +++.||+|.+..... ...+.+|++++++++||||+++++++... +...++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 468999999999999764 468899999865432 35678899999999999999999988643 345589999984
Q ss_pred CCHHHHHHhhccC----CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceee----CCCCceEEeccCcccccc
Q 001171 918 GNLATLLQEASHQ----DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLF----DADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 918 gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~ 989 (1133)
++|.+++...... ....+++..+..++.||+.||+|||++||+||||||+||++ +.++.+||+|||+++...
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 6888887643211 12347888899999999999999999999999999999999 456789999999997653
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCcc
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMF 1043 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~ 1043 (1133)
.............||+.|+|||++.+ ..++.++||||+||++|||++|++||..
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 32222223345678999999999876 4589999999999999999999999964
No 173
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.8e-34 Score=328.78 Aligned_cols=264 Identities=20% Similarity=0.238 Sum_probs=197.7
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC-----
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPP----- 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 905 (1133)
..++|.+.++||+|+||.||+|... .++.||||++.... ...+.+.+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4568999999999999999999765 58899999986532 22456788999999999999999999875432
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
...++||||++ +++.+.+.. .+++..+..++.|+++||+|||++||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 24589999995 577777753 2678888999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc----
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ---- 1061 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---- 1061 (1133)
+.... ........||..|+|||++.+..++.++||||+||++|||++|+.||...+..+....+.+......
T Consensus 174 ~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 174 RTAGT----SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred cccCC----CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 65422 1122345789999999999998999999999999999999999999977665554444433211100
Q ss_pred ------cccccc--CCc---------CCCC-CCChh-H-HHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1062 ------ISELLE--PGL---------LELD-PESSE-W-EEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1062 ------~~~~~~--~~~---------~~~~-~~~~~-~-~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
...... +.. .... +.... . .......+++.+|++.||.+|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 000 0000 00000 0 001123489999999999999999999986
No 174
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4e-34 Score=318.55 Aligned_cols=247 Identities=20% Similarity=0.286 Sum_probs=189.3
Q ss_pred cccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCC
Q 001171 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGN 919 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gs 919 (1133)
||+|+||+||++.++ +|+.||+|++...... .+.+..|++++++++||||+++.+++... ...++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK-TDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC-CeEEEEEeCCCCCC
Confidence 799999999999765 6899999998643222 24567899999999999999999988765 44599999999999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCC
Q 001171 920 LATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999 (1133)
Q Consensus 920 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 999 (1133)
|.+++..... ....+++..+..++.||+.|++|||+.+|+||||||+||+++.++.++++|||+++...... ....
T Consensus 80 L~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---~~~~ 155 (280)
T cd05608 80 LRYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ---SKTK 155 (280)
T ss_pred HHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---cccc
Confidence 9988864322 22458899999999999999999999999999999999999999999999999986542211 1223
Q ss_pred CCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1000 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...........+........ . ..+..
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------~-~~~~~--- 223 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS--------V-TYPDK--- 223 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC--------C-CCccc---
Confidence 45689999999999999999999999999999999999999975443222222222111110 0 00000
Q ss_pred HHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
.. ....+++.+|++.||++|| +++|++++
T Consensus 224 ~~--~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 224 FS--PASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CC--HHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 00 1123788899999999999 67777764
No 175
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.7e-34 Score=323.59 Aligned_cols=263 Identities=23% Similarity=0.299 Sum_probs=202.5
Q ss_pred hcCCCcccccccccceeEEEEEEC--------CceEEEEEEcccCCc--CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCC
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ--------DGMVLSIRRLRDGTI--DENTFRKEAEALGKV-KHRNLTVLRGYYAGP 904 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 904 (1133)
.++|.+.+.||+|+||.||+|++. .+..+|+|.+..... ....+.+|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 457999999999999999999753 235799999875422 235678899999999 799999999999876
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhcc-----------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEASH-----------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA 973 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~ 973 (1133)
. ..++||||+++|+|.+++...+. .....+++..+..++.|++.|++|||+.|++||||||+||+++.
T Consensus 97 ~-~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 175 (307)
T cd05098 97 G-PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 175 (307)
T ss_pred C-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence 4 55999999999999999986432 12235889999999999999999999999999999999999999
Q ss_pred CCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHH
Q 001171 974 DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKW 1052 (1133)
Q Consensus 974 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 1052 (1133)
++.++++|||.++....... ........++..|+|||++.+..++.++||||+||++|||++ |..||......+....
T Consensus 176 ~~~~kL~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~ 254 (307)
T cd05098 176 DNVMKIADFGLARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 254 (307)
T ss_pred CCcEEECCCcccccccccch-hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 99999999999865432111 111122234568999999988889999999999999999998 8899876554444333
Q ss_pred HHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCC
Q 001171 1053 VKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVG 1117 (1133)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~ 1117 (1133)
+.. ....+. +... . ....+++.+|+..+|.+||++.||++.|+++...
T Consensus 255 ~~~----~~~~~~--------~~~~---~--~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 255 LKE----GHRMDK--------PSNC---T--NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHc----CCCCCC--------CCcC---C--HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 322 111110 0000 0 1222789999999999999999999999886543
No 176
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.2e-34 Score=326.59 Aligned_cols=241 Identities=21% Similarity=0.345 Sum_probs=191.8
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
+.||+|+||.||+|.++ +++.||+|++.+.. .....+.+|.++++.+ +||||+++++++.... ..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD-RLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-EEEEEEcCCC
Confidence 46999999999999775 57899999987532 2245667899999888 7999999999988764 5599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++.... .+++..+..++.||+.||+|||+.+|+||||||+||++++++.++|+|||+++..... ..
T Consensus 80 ~~~L~~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 151 (318)
T cd05570 80 GGDLMFHIQRSG-----RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG---GV 151 (318)
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---CC
Confidence 999999987643 3889999999999999999999999999999999999999999999999998642211 11
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...+.......+... .. ... ..
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~----~~--~~~-------~~ 218 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED----EV--RYP-------RW 218 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC----CC--CCC-------Cc
Confidence 223346899999999999999999999999999999999999999766655444333221 10 000 00
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCH-----HHHHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSM-----ADIVFM 1110 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~-----~evl~~ 1110 (1133)
. . ....+++.+||+.||.+||++ .+++++
T Consensus 219 ~---~--~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 219 L---S--KEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred C---C--HHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 0 0 112378999999999999999 888754
No 177
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1e-33 Score=318.02 Aligned_cols=266 Identities=21% Similarity=0.372 Sum_probs=200.8
Q ss_pred hcCCCcccccccccceeEEEEEECC---------------ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD---------------GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLR 898 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------------g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~ 898 (1133)
.++|++.++||+|+||.||++...+ ...||+|++..... ....+.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3579999999999999999986532 23589999865322 235688999999999999999999
Q ss_pred EEEeCCCCcEEEEEeccCCCCHHHHHHhhccC-------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceee
Q 001171 899 GYYAGPPDVRLLVYDYMPNGNLATLLQEASHQ-------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLF 971 (1133)
Q Consensus 899 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll 971 (1133)
+++.... ..++||||+++++|.+++...... ....+++..+..++.|++.|++|||+.+++||||||+||++
T Consensus 84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 84 GVCVSDD-PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEcCCC-ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 9997764 459999999999999999753211 11236888899999999999999999999999999999999
Q ss_pred CCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh--CCCCCccCChhhH
Q 001171 972 DADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT--GRKPVMFTQDEDI 1049 (1133)
Q Consensus 972 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t--g~~Pf~~~~~~~~ 1049 (1133)
+.++.+|++|||+++....... ........++..|+|||+..++.++.++|||||||++|||++ |..||.....++.
T Consensus 163 ~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~ 241 (295)
T cd05097 163 GNHYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV 241 (295)
T ss_pred cCCCcEEecccccccccccCcc-eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence 9999999999999865432211 111223345678999999988889999999999999999998 6678876555554
Q ss_pred HHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1050 VKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
...+.+............. .+.. . ....+++.+||+.||++||++.+|++.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~-----~~~~---~--~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 242 IENTGEFFRNQGRQIYLSQ-----TPLC---P--SPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHhhhhccccccCCC-----CCCC---C--HHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 4443332221110000000 0000 0 123489999999999999999999999864
No 178
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.8e-33 Score=311.63 Aligned_cols=255 Identities=22% Similarity=0.385 Sum_probs=189.5
Q ss_pred cccccccceeEEEEEECC---ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 843 NVLSRGRYGLIFKASYQD---GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
+.||+|+||.||+|.+.+ +..+|+|++..... ....+.+|+.++++++||||+++++++.+... .++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTP-YLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCC-cEEEEECCCC
Confidence 369999999999997643 46799999865432 23578889999999999999999999877644 5899999999
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 997 (1133)
|+|.+++...........++..+..++.|++.|++|||+.+++||||||+||+++.++.++++|||.++....... ...
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-~~~ 158 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-YVT 158 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce-eec
Confidence 9999999865433333467778888999999999999999999999999999999999999999999864322111 112
Q ss_pred CCCCCCCCCccCccccCCC-------CCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 998 STTPIGSLGYVSPEAASTG-------QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 998 ~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.....++..|+|||++.+. .++.++|||||||++|||++ |+.||......+......... .....++.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~ 234 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ----QLKLPKPR 234 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcc----cCCCCCCc
Confidence 2334577889999998542 35789999999999999996 999997655444333222111 11111111
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
... ... +. ..+++.+|| .+|++||+++||++.|+
T Consensus 235 ~~~--~~~---~~---~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 235 LKL--PLS---DR---WYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCC--CCC---hH---HHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 110 011 11 125778898 68999999999998875
No 179
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.7e-34 Score=327.31 Aligned_cols=245 Identities=20% Similarity=0.342 Sum_probs=189.6
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|+++ +++.||+|+++.... ..+.+.+|..+++++ +||||+++++++.... ..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~-~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES-RLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC-EEEEEEeCCC
Confidence 46999999999999775 588999999975322 234578899999998 7999999999988764 5599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~g~L~~~~~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---~~ 151 (329)
T cd05588 80 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP---GD 151 (329)
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC---CC
Confidence 999999887542 3889999999999999999999999999999999999999999999999998642211 12
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCCh-----hhHHHHHHHHhhhccccccccCCcC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQD-----EDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....+..+.......
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 222 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI--------- 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC---------
Confidence 23345799999999999998999999999999999999999999963211 1112222222222111
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCC------HHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS------MADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs------~~evl~~ 1110 (1133)
..+.... ....+++.+|++.||.+||+ +.|++++
T Consensus 223 ~~p~~~~-----~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 223 RIPRSLS-----VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CCCCCCC-----HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 0111100 11237899999999999997 6777754
No 180
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=327.53 Aligned_cols=256 Identities=24% Similarity=0.368 Sum_probs=206.6
Q ss_pred CCcccccccccceeEEEEEE-CCc----eEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 839 FDEENVLSRGRYGLIFKASY-QDG----MVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~-~~g----~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
....++||+|+||+||+|.| .+| .+||+|++...... ..++.+|+-+|.+++|||+++++|++.... ..+|
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~--~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST--LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch--HHHH
Confidence 34568999999999999966 334 46889988654433 568899999999999999999999998753 4799
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
++|++.|+|.++++.++. .+-....+.|.+|||+||.|||.+++|||||.++|||+.+..++||.|||+++.....
T Consensus 776 tq~mP~G~LlDyvr~hr~----~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRD----NIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHhcccchHHHHHHHhhc----cccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 999999999999998653 3777888999999999999999999999999999999999999999999999876544
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
... .......-.+.|||-|.+....|+.++|||||||++||++| |..||.....+++.+.+++..+-.+
T Consensus 852 ~~e-y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsq--------- 921 (1177)
T KOG1025|consen 852 EKE-YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQ--------- 921 (1177)
T ss_pred ccc-ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCC---------
Confidence 332 22233345568999999999999999999999999999999 9999998887777766655433211
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCC
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGP 1118 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~ 1118 (1133)
+.....+-+ .++.+||..|+..||+++++...+.+....|
T Consensus 922 ----PpiCtiDVy----~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 922 ----PPICTIDVY----MVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred ----CCCccHHHH----HHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 111111122 4567899999999999999998887655443
No 181
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6e-34 Score=314.93 Aligned_cols=251 Identities=21% Similarity=0.325 Sum_probs=191.6
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc------CHHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI------DENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRL 909 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~ 909 (1133)
+|+..++||+|+||.||+|... ++..||+|++..... ....+.+|++++++++||||+++++++... ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 6888999999999999999764 589999998854321 124678899999999999999999988653 35568
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
++|||+++++|.+++.... .+++..+..++.|++.||+|||+.+|+||||||+||+++.++.++|+|||+++...
T Consensus 83 l~~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG-----ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 9999999999999997633 37888889999999999999999999999999999999999999999999987543
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.............++..|+|||++.+..++.++||||+||++|||++|+.||........ +.+...... .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~---~~~~~~~~~-----~~~ 229 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA---IFKIATQPT-----NPQ 229 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH---HHHHhcCCC-----CCC
Confidence 221111222334588899999999888899999999999999999999999965432221 111111110 111
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. .. ..+. ..+++ +||..+|++||+++||+++
T Consensus 230 ~~---~~---~~~~--~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 230 LP---SH---ISEH--ARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred Cc---hh---cCHH--HHHHH-HHhcCChhhCcCHHHHhcC
Confidence 10 00 0111 11344 6888999999999999753
No 182
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5.6e-34 Score=317.55 Aligned_cols=259 Identities=23% Similarity=0.331 Sum_probs=202.0
Q ss_pred hcCCCcccccccccceeEEEEEEC-Cce----EEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGM----VLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 908 (1133)
..+|++.++||+|+||+||+|.+. +|+ .||+|.+..... ..+.+.+|+.+++.+.||||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~ 83 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS--TV 83 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC--Cc
Confidence 357889999999999999999763 443 489999864332 245788999999999999999999998753 34
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
+++|||+++|+|.+++.... ..+++..+..++.||+.|++|||+.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENK----DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred EEEEEcCCCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 79999999999999997532 24889999999999999999999999999999999999999999999999998755
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
...... .......++..|+|||...+..++.++|||||||++|||++ |..||...........+... ..... .
T Consensus 160 ~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~-~ 233 (279)
T cd05109 160 DIDETE-YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG----ERLPQ-P 233 (279)
T ss_pred ccccce-eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC----CcCCC-C
Confidence 322111 11122345678999999988889999999999999999998 99999765554444433221 10000 0
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCC
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGP 1118 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~ 1118 (1133)
. .... ...+++.+||+.||++||++.|+++.|+++...+
T Consensus 234 ~------~~~~------~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 234 P------ICTI------DVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred c------cCCH------HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0 0000 1237888999999999999999999999887655
No 183
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.4e-34 Score=320.39 Aligned_cols=259 Identities=21% Similarity=0.311 Sum_probs=199.8
Q ss_pred HhcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCcC--HHHHHHHHHHHhhc-cCCCeeeEEEEEeCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTID--ENTFRKEAEALGKV-KHRNLTVLRGYYAGPP 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 905 (1133)
..++|.+.+.||+|+||.||+|... .+..||+|++...... .+.+.+|+++++++ +||||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3457899999999999999999641 3568999998754322 35688999999999 7999999999987764
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
..++||||+++|+|.++++.... ..+++..+..++.|++.|++|||+++|+|+||||+||+++.++.++++|||++
T Consensus 113 -~~~lv~e~~~~~~L~~~i~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 -PILVITEYCCYGDLLNFLRRKRE---SFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred -ceEEEEEcCCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 45999999999999999975332 23789999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
+....... ........++..|+|||++.+..++.++||||+||++|||++ |..||......+...... ..+. ..
T Consensus 189 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~---~~~~-~~ 263 (302)
T cd05055 189 RDIMNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI---KEGY-RM 263 (302)
T ss_pred ccccCCCc-eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHH---HcCC-cC
Confidence 75432211 111222346778999999988889999999999999999998 999986544332221111 1110 00
Q ss_pred cccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1065 LLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
... .... ....+++.+|++.+|++||++.|+++.|++.
T Consensus 264 ~~~------~~~~------~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 AQP------EHAP------AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCC------CCCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 000 0000 1123789999999999999999999999874
No 184
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.5e-34 Score=311.86 Aligned_cols=250 Identities=26% Similarity=0.420 Sum_probs=203.0
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.++|++.++||+|+||.||+|... |+.||+|.+.......+.+.+|+.++++++|+|++++++++... ...++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG-NPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC-CCeEEEEEec
Confidence 347889999999999999999875 78899999976554567899999999999999999999998864 5569999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++..... ..+++..+..++.|++.|++|||+.|++||||||+||+++.++.++++|||.++......
T Consensus 83 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 83 AKGSLVDYLRSRGR---AVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 99999999976432 248999999999999999999999999999999999999999999999999987542111
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
....++..|+|||++.++.++.++||||+|+++|||++ |+.||......+....+.+... ....
T Consensus 157 ---~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~----~~~~-------- 221 (256)
T cd05039 157 ---DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR----MEAP-------- 221 (256)
T ss_pred ---ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC----CCCc--------
Confidence 12234568999999988889999999999999999998 9999976655554443332111 0000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.. .. ....+++.+|+..+|++||++.|++++|+.
T Consensus 222 ~~---~~--~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 222 EG---CP--PEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred cC---CC--HHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 00 00 112378999999999999999999999975
No 185
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=6.9e-37 Score=334.93 Aligned_cols=365 Identities=24% Similarity=0.378 Sum_probs=210.9
Q ss_pred cccccCcEEEcccCcccC-CCCccccCCCCcceEeccCCcccCcCCCccccccchhhhhhcccccCCCccCccCCcceEE
Q 001171 92 ADLHELRKLSLHSNHLNG-SIPASLHQCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISADISPSLRYL 170 (1133)
Q Consensus 92 ~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 170 (1133)
+-|++++-+|+++|.++| .+|.....+++++-|-|...++. .+|+.++.|.+|++|.++||++..
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~------------- 69 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS------------- 69 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-------------
Confidence 346788888999999985 78988999999999999988887 799999999999999999888762
Q ss_pred EccCCcCCCCCCCCCCCCCcCcEEeccCCcCCCC-CcccccCccccceEecccccccCCCCccccCccccceeecccccc
Q 001171 171 DLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGE-VPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVL 249 (1133)
Q Consensus 171 ~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l 249 (1133)
+-+.++.++.|+.+++..|++... ||..+-.+..|+.||||+|++. ..|..+..-.++..|+|++|+|
T Consensus 70 ----------vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~I 138 (1255)
T KOG0444|consen 70 ----------VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNI 138 (1255)
T ss_pred ----------hhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcc
Confidence 233445556666666666666422 5555666666666666666665 5566666556666666666666
Q ss_pred CCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCccccccEEeccCCcccc
Q 001171 250 KGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRA 329 (1133)
Q Consensus 250 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~ 329 (1133)
..++-..|-+++.|-+||||+|++..+.| .+ ..+..|+.|+|++|.+ ..
T Consensus 139 etIPn~lfinLtDLLfLDLS~NrLe~LPP-Q~-----RRL~~LqtL~Ls~NPL-------------------------~h 187 (1255)
T KOG0444|consen 139 ETIPNSLFINLTDLLFLDLSNNRLEMLPP-QI-----RRLSMLQTLKLSNNPL-------------------------NH 187 (1255)
T ss_pred ccCCchHHHhhHhHhhhccccchhhhcCH-HH-----HHHhhhhhhhcCCChh-------------------------hH
Confidence 54433344555555556666665553222 22 2223333333333222 21
Q ss_pred cCCchhhcccccceeeccCceee-cccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcccccCCCccC
Q 001171 330 VFPSWLTNVTSLRVMDLSGNFFS-GNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLG 408 (1133)
Q Consensus 330 ~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 408 (1133)
..-..+..+++|++|.+|+.+-+ ..+|.++..+.+|..+||+.|.+. .+|+.+-++++|+.|+||+|+|+ .+-...+
T Consensus 188 fQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~ 265 (1255)
T KOG0444|consen 188 FQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEG 265 (1255)
T ss_pred HHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHH
Confidence 11122344667777777776543 356777777777777777777776 45666666667777777777665 2223333
Q ss_pred CCCCCcEEEccCCcCccccCccccCccccceeeccccccccc-CChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCCcE
Q 001171 409 GIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGN-IPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLV 487 (1133)
Q Consensus 409 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 487 (1133)
...+|+.|+|++|+++ ..|..+..+++|+.|.+.+|+++-. +|..++.+.+|+++..++|.+. .+|..++.+..|+.
T Consensus 266 ~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~k 343 (1255)
T KOG0444|consen 266 EWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQK 343 (1255)
T ss_pred HHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHH
Confidence 3444555555555555 2344455555555555555544321 3444444444444444444444 44444444444444
Q ss_pred EEcccCCCccccCCCcCCcccccEEecccc
Q 001171 488 LNLSASGFSGKIPGSIGSLMRLTTLDLSNQ 517 (1133)
Q Consensus 488 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 517 (1133)
|.|++|++- .+|..+.-++.|+.||+.+|
T Consensus 344 L~L~~NrLi-TLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 344 LKLDHNRLI-TLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred hccccccee-echhhhhhcCCcceeeccCC
Confidence 444444443 33444444444444444443
No 186
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=8.9e-35 Score=330.12 Aligned_cols=237 Identities=24% Similarity=0.389 Sum_probs=188.3
Q ss_pred cccccccceeEEEEEE----CCceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 843 NVLSRGRYGLIFKASY----QDGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
+.||+|+||.||+++. ..|+.||+|++..... ....+.+|++++++++||||+++++++... ...++||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE-GKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC-CEEEEEEcCC
Confidence 5799999999999965 3578999999864322 234567899999999999999999999876 4559999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++|+|.+++.+. ..+++..+..++.||+.||+|||+.+|+||||||+||+++.++.+||+|||+++..... .
T Consensus 81 ~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~---~ 152 (318)
T cd05582 81 RGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH---E 152 (318)
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC---C
Confidence 999999998753 23789999999999999999999999999999999999999999999999998654221 1
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||......+....+.+. ...++ .
T Consensus 153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~--~~~~p-----------~ 219 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA--KLGMP-----------Q 219 (318)
T ss_pred CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC--CCCCC-----------C
Confidence 1223457899999999998888999999999999999999999999766554444333221 00011 0
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHH
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~e 1106 (1133)
... ....+++.+||+.||++||++.+
T Consensus 220 ~~~-----~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 220 FLS-----PEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCC-----HHHHHHHHHHhhcCHhHcCCCCC
Confidence 100 01227889999999999999544
No 187
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5e-34 Score=322.07 Aligned_cols=262 Identities=22% Similarity=0.322 Sum_probs=203.4
Q ss_pred hcCCCcccccccccceeEEEEEEC--------CceEEEEEEcccCC--cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCC
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ--------DGMVLSIRRLRDGT--IDENTFRKEAEALGKV-KHRNLTVLRGYYAGP 904 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 904 (1133)
.++|++.+.||+|+||.||+|++. ++..||+|.+.... ...+.+.+|+++++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 457889999999999999999642 24579999986432 2245788999999999 899999999999876
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhccC-----------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEASHQ-----------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA 973 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~ 973 (1133)
. ..++||||+++|+|.+++...+.. ....+++..+..++.||++|++|||++||+||||||+||+++.
T Consensus 94 ~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~ 172 (304)
T cd05101 94 G-PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE 172 (304)
T ss_pred C-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC
Confidence 4 559999999999999999864321 1235788899999999999999999999999999999999999
Q ss_pred CCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHH
Q 001171 974 DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKW 1052 (1133)
Q Consensus 974 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 1052 (1133)
++.+|++|||.++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||......+....
T Consensus 173 ~~~~kl~D~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 251 (304)
T cd05101 173 NNVMKIADFGLARDVNNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 251 (304)
T ss_pred CCcEEECCCccceeccccccc-ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 999999999998755322111 11223345678999999988889999999999999999998 7888876655554443
Q ss_pred HHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1053 VKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
+... ..... +.. .. ....+++.+||+.+|.+||++.|+++.|+++..
T Consensus 252 ~~~~----~~~~~---------~~~--~~--~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 252 LKEG----HRMDK---------PAN--CT--NELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HHcC----CcCCC---------CCC--CC--HHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 3221 10000 000 00 112368899999999999999999999987654
No 188
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.1e-34 Score=332.86 Aligned_cols=254 Identities=19% Similarity=0.282 Sum_probs=195.0
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
..++|++.+.||+|+||.||+|+++ +++.||+|++.+.. ...+.+.+|+++++.++||||+++++++... ...+
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~-~~~~ 119 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD-RYLY 119 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC-CEEE
Confidence 4578999999999999999999876 58899999985421 1234577899999999999999999998775 4569
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||+++|+|.+++... .++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 120 lv~Ey~~gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 120 MVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 999999999999998752 26788888899999999999999999999999999999999999999999987543
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCC----CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccc
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTG----QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISEL 1065 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1133)
... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||...+.......+........ .
T Consensus 194 ~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~ 268 (371)
T cd05622 194 KEG--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT---F 268 (371)
T ss_pred cCC--cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc---C
Confidence 211 1223356799999999998653 378999999999999999999999976655444433322111111 1
Q ss_pred ccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCC--CCCHHHHHHHH
Q 001171 1066 LEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLD--RPSMADIVFML 1111 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~--RPs~~evl~~L 1111 (1133)
.+. ..... ...+++.+|+..++.+ ||++.|++++.
T Consensus 269 ~~~---------~~~s~--~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 269 PDD---------NDISK--EAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCc---------CCCCH--HHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 000 00011 1126788899744433 78999999864
No 189
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.8e-35 Score=295.82 Aligned_cols=277 Identities=20% Similarity=0.266 Sum_probs=210.0
Q ss_pred HHhcCCCcccccccccceeEEEEEECC-----ceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCC
Q 001171 834 EATRQFDEENVLSRGRYGLIFKASYQD-----GMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPP 905 (1133)
Q Consensus 834 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 905 (1133)
+....|+....||+|.||.||+|.-.+ .+.+|+|+++.... -....-+|+..++.++|||++.+..++...+
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 456689999999999999999994332 24799999975421 1346678999999999999999999988766
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC----CceEEec
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD----FEAHLSE 981 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~----~~~kl~D 981 (1133)
...++++||.+. +|.++++.++......++...+..|..||+.|+.|||++-|+||||||.|||+..+ |.+||+|
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence 777999999965 89999988877666789999999999999999999999999999999999999877 8999999
Q ss_pred cCcccccccCCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChh------hHHHHHH
Q 001171 982 FGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDE------DIVKWVK 1054 (1133)
Q Consensus 982 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~------~~~~~~~ 1054 (1133)
+|++|.+...-..-......+.|.+|+|||.+.+. .|+++.||||.|||+.||+|-++-|.+.... -..+.+.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 99999876554444455667889999999998775 5899999999999999999988877532211 1122222
Q ss_pred HHhhh-ccccccccCCcCCCCCCChhHHHHH---------------------HhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1055 KQLQR-GQISELLEPGLLELDPESSEWEEFL---------------------LGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1055 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
+.+.- +...+...+.+.+.+........+. ..+++..+++..||.+|.|+++.+++-
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 22221 1122222233322222211111111 134789999999999999999998764
No 190
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.4e-33 Score=312.50 Aligned_cols=254 Identities=22% Similarity=0.376 Sum_probs=186.7
Q ss_pred cccccccceeEEEEEECC---ceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 843 NVLSRGRYGLIFKASYQD---GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
+.||+|+||.||+|.... ...+|+|.+...... ...+.+|+++++.++||||+++++++.... ..++||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~-~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI-PYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC-ceEEEEEeCCC
Confidence 359999999999996543 457888887643322 356788999999999999999999988764 45999999999
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 997 (1133)
|+|.+++...........++.....++.||+.|++|||+++|+||||||+||+++.++.+|++|||+++....... ...
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~ 158 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY-YIT 158 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh-eec
Confidence 9999999875533333456778889999999999999999999999999999999999999999999864322111 111
Q ss_pred CCCCCCCCCccCccccC-------CCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 998 STTPIGSLGYVSPEAAS-------TGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 998 ~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.....++..|+|||++. ...++.++||||+||++|||++ |..||......+.......... .....+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~ 234 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQD----IKLPKPQ 234 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccC----ccCCCCc
Confidence 23334667899999864 3356889999999999999999 7888876555443333322111 1111111
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
... .....+ .+++..|| .||++||+++||++.|
T Consensus 235 ~~~--~~~~~~------~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 235 LDL--KYSDRW------YEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred ccc--cCCHHH------HHHHHHHh-cCcccccCHHHHHHHh
Confidence 110 001111 14667788 5999999999999887
No 191
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.2e-33 Score=309.61 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=194.1
Q ss_pred cccccccceeEEEEEECCceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCH
Q 001171 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNL 920 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL 920 (1133)
++||+|+||.||+|..+++..||+|.+...... ...+.+|++++++++||||+++++++.... ..++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ-PIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC-ccEEEEECCCCCcH
Confidence 469999999999999888899999998654322 346889999999999999999999998764 45999999999999
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCC
Q 001171 921 ATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000 (1133)
Q Consensus 921 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 1000 (1133)
.+++.... ..+++..+..++.+++.|+.|+|++|++||||||+||+++.++.++++|||+++...... ......
T Consensus 80 ~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--~~~~~~ 153 (250)
T cd05085 80 LSFLRKKK----DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI--YSSSGL 153 (250)
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccc--cccCCC
Confidence 99987533 237899999999999999999999999999999999999999999999999986432211 111122
Q ss_pred CCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1001 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
..++..|+|||++.+..++.++||||||+++|++++ |..||...........+.+.. .... .. ...
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~----~~~~-~~------~~~-- 220 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY----RMSC-PQ------KCP-- 220 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC----CCCC-CC------CCC--
Confidence 234568999999988889999999999999999998 999997655444433332211 0000 00 000
Q ss_pred HHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
....+++.+|++.+|++||++.|+++.|.
T Consensus 221 ----~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 ----DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ----HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 12237899999999999999999999885
No 192
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.3e-34 Score=326.47 Aligned_cols=245 Identities=20% Similarity=0.347 Sum_probs=188.1
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|+.+ +++.||+|++.+.. ...+.+.+|+.++.++ +||||+++++++... ...++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~-~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-SRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC-CEEEEEEeCCC
Confidence 46999999999999875 57899999987532 1234577899988877 899999999998876 45599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|..++...+ .+++..+..++.||+.|++|||+++|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~~~L~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~---~~ 151 (329)
T cd05618 80 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GD 151 (329)
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---CC
Confidence 999998887643 3889999999999999999999999999999999999999999999999998643221 11
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCC-----hhhHHHHHHHHhhhccccccccCCcC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQ-----DEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ......++.+.......
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------- 222 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------- 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC---------
Confidence 2234578999999999999999999999999999999999999995311 11112222222221111
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCC------HHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS------MADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs------~~evl~~ 1110 (1133)
.++.... ....+++.+|++.||++||+ +.|++++
T Consensus 223 ~~p~~~~-----~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 223 RIPRSLS-----VKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCCC-----HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 0111100 11237889999999999998 4677644
No 193
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=9.1e-34 Score=316.68 Aligned_cols=260 Identities=19% Similarity=0.314 Sum_probs=197.2
Q ss_pred CCCcccccccccceeEEEEEE-----CCceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEE
Q 001171 838 QFDEENVLSRGRYGLIFKASY-----QDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRL 909 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~ 909 (1133)
-|++.+.||+|+||.||.+.+ .++..||+|.+..... ..+.+.+|++++++++|||++++++++... ....+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 468889999999999999974 2478899999864322 235788999999999999999999988765 34568
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||+++++|.+++.+.. ..+++..+..++.||+.||+|+|++||+||||||+||+++.++.++++|||+++...
T Consensus 85 lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK----NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 9999999999999997532 247899999999999999999999999999999999999999999999999987553
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCC-----------hhhHHHHHHHHhh
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQ-----------DEDIVKWVKKQLQ 1058 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~-----------~~~~~~~~~~~~~ 1058 (1133)
.............++..|+|||++.+..++.++|||||||++|||++++.|+.... .+.......+...
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE 240 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH
Confidence 32221112233456778999999988889999999999999999999877653211 0000111111111
Q ss_pred hccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1059 RGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
..... ..... .. ....+++.+|++.+|.+||++.++++.++++
T Consensus 241 ~~~~~--------~~~~~---~~--~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 241 EGKRL--------PRPPN---CP--EEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCccC--------CCCCC---CC--HHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11000 00000 00 1223789999999999999999999999874
No 194
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=8.9e-34 Score=311.71 Aligned_cols=249 Identities=22% Similarity=0.353 Sum_probs=199.4
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.+.||+|++|.||+|..+ +++.|++|.+.... ...+.+.+|++++++++|||++++++++... ...++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK-GKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-CEEEEEEE
Confidence 4778899999999999999775 58999999986432 2356788999999999999999999998876 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++.... ...+++..++.++.+++.|+.|||+.||+||||||+||+++.++.++++|||+++......
T Consensus 80 ~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~- 155 (256)
T cd08529 80 YAENGDLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT- 155 (256)
T ss_pred eCCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc-
Confidence 999999999998642 2348889999999999999999999999999999999999999999999999987543221
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......|++.|+|||+..+..++.++|+|||||++|||++|+.||...........+.+ ........
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~------ 223 (256)
T cd08529 156 --NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR----GVFPPVSQ------ 223 (256)
T ss_pred --chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc----CCCCCCcc------
Confidence 122334688899999999988899999999999999999999999976654443333222 11111000
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. -....+++.+||+.+|++||++.|++++
T Consensus 224 -----~~--~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 224 -----MY--SQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -----cc--CHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 00 0112378999999999999999999864
No 195
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=8.2e-34 Score=313.15 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=191.8
Q ss_pred cccccccceeEEEEEEC----CceEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ----DGMVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
+.||+|+||.||+|.+. .+..||+|++.... ...+.+.+|+.+++.++|||++++++++...+...++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999753 24679999985322 2245788899999999999999999988655566689999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC-C
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE-A 995 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~ 995 (1133)
+|+|.+++..... ..++..+..++.||+.|++|||+.+|+||||||+||++++++.+|++|||+++........ .
T Consensus 81 ~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSETH----NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 9999999976432 2567778889999999999999999999999999999999999999999998644321110 1
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhC-CCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTG-RKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......++..|+|||++.+..++.++|||||||++|||++| .+||......+....+... .... .+
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~------ 224 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG----RRLL--QP------ 224 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC----CCCC--CC------
Confidence 111233456789999999888899999999999999999995 5667655444443333221 0000 00
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
.. .. ....+++.+||+.+|++||++.|+++.|+.+.
T Consensus 225 -~~--~~--~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 225 -EY--CP--DPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred -Cc--CC--HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 00 00 11237899999999999999999999998754
No 196
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=5.4e-34 Score=323.97 Aligned_cols=240 Identities=21% Similarity=0.333 Sum_probs=189.6
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV 911 (1133)
+|+..++||+|+||.||+|..+ +|+.||+|++.... ...+.+..|.++++.+. |++|+++++++... +..++|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV-DRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-CEEEEE
Confidence 4778899999999999999775 68999999986432 22345778999998886 56777888888765 456999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++.... .+++..+..++.||+.|++|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~Ey~~~g~L~~~i~~~~-----~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 80 MEYVNGGDLMYHIQQVG-----KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred EcCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 99999999999987643 3889999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...........+... ...++
T Consensus 155 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~--~~~~p-------- 221 (323)
T cd05615 155 ---GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH--NVSYP-------- 221 (323)
T ss_pred ---CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCC--------
Confidence 11223456899999999999888999999999999999999999999876655544443321 00000
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSM 1104 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~ 1104 (1133)
.... ....+++.+|++.+|.+|++.
T Consensus 222 ---~~~~-----~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 ---KSLS-----KEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---ccCC-----HHHHHHHHHHcccCHhhCCCC
Confidence 0000 112378899999999999974
No 197
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=325.40 Aligned_cols=245 Identities=27% Similarity=0.425 Sum_probs=190.2
Q ss_pred cccccccceeEEEEEECC-ceEEEEEEcccC-CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCH
Q 001171 843 NVLSRGRYGLIFKASYQD-GMVLSIRRLRDG-TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNL 920 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL 920 (1133)
-++|+|.||+||.|++.+ ...+|||.++.. ....+.+..|+...++++|.|||+++|.+.+.+ +.-+.||.++||+|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG-f~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG-FFKIFMEQVPGGSL 659 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC-eEEEEeecCCCCcH
Confidence 369999999999998764 677999999743 334567889999999999999999999987764 55799999999999
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeC-CCCceEEeccCcccccccCCCCCCCCC
Q 001171 921 ATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFD-ADFEAHLSEFGLDRLAIATPAEASSST 999 (1133)
Q Consensus 921 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 999 (1133)
.++++..= +.-.-.+...-.+.+||++||.|||+..|||||||-+|||++ -.|.+||+|||-++.... ......
T Consensus 660 SsLLrskW--GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg---inP~TE 734 (1226)
T KOG4279|consen 660 SSLLRSKW--GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG---INPCTE 734 (1226)
T ss_pred HHHHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc---CCcccc
Confidence 99998631 111125667778999999999999999999999999999996 478999999999876532 233456
Q ss_pred CCCCCCCccCccccCCC--CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCC
Q 001171 1000 TPIGSLGYVSPEAASTG--QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPES 1077 (1133)
Q Consensus 1000 ~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1077 (1133)
++.||..|||||++..+ .|++++|||||||++.||.||++||.........- .+-++- ...|.+
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM-FkVGmy------KvHP~i------- 800 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM-FKVGMY------KVHPPI------- 800 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh-hhhcce------ecCCCC-------
Confidence 67899999999999765 48999999999999999999999996443322111 111100 011111
Q ss_pred hhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHH
Q 001171 1078 SEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1078 ~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
.++..+.+ .+|.+|+.+||.+||++.++++
T Consensus 801 --Peelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 801 --PEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred --cHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 12333333 7999999999999999999985
No 198
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.3e-34 Score=315.33 Aligned_cols=256 Identities=22% Similarity=0.433 Sum_probs=199.3
Q ss_pred cCCCcccccccccceeEEEEEECC-c---eEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQD-G---MVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~-g---~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.+|++.+.||+|+||.||+|.+.. + ..||+|.+..... ..+.|..|++++++++||||+++++++.... ..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR-PVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC-ceEE
Confidence 357889999999999999997753 3 4699999865322 2457899999999999999999999987664 4589
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++++|.+++.... ..+++..++.++.|++.|++|||++|++||||||+||+++.++.++++|||.++....
T Consensus 83 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 83 ITEFMENGALDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEecCCCCcHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 999999999999987642 2478999999999999999999999999999999999999999999999999865433
Q ss_pred CCCCCCCCC--CCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 991 TPAEASSST--TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 991 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
......... ....+..|+|||++.+..++.++||||+||++||+++ |..||...+..+...++..... .+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~--- 232 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR---LPP--- 232 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc---CCC---
Confidence 221111111 1112457999999998899999999999999999987 9999976665555444422110 000
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
... .. ....+++.+||+.+|.+||++.++++.|+.+
T Consensus 233 ------~~~---~~--~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 233 ------PMD---CP--TALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------ccc---CC--HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 00 0123788999999999999999999999864
No 199
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.4e-34 Score=326.27 Aligned_cols=239 Identities=24% Similarity=0.373 Sum_probs=185.0
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHH-HHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEA-EALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~-~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|++. +++.||+|++..... ....+..|. .+++.++||||+++++++...+ ..++||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~-~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD-KLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC-eEEEEEeCCC
Confidence 46999999999999875 578899999864321 123344444 4567889999999999988764 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++...+ .+.+.....++.||++||+|||++||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~---~~ 151 (325)
T cd05602 80 GGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH---NG 151 (325)
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC---CC
Confidence 999999997633 3677788889999999999999999999999999999999999999999998643221 12
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+... .. .+.+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~----~~--~~~~~~------ 219 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK----PL--QLKPNI------ 219 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC----Cc--CCCCCC------
Confidence 233457999999999999989999999999999999999999999866655544443321 00 011111
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHHHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMADIV 1108 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl 1108 (1133)
.. ...+++.+|++.||.+||++.+.+
T Consensus 220 ~~------~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 220 TN------SARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CH------HHHHHHHHHcccCHHHCCCCCCCH
Confidence 01 112788899999999999887443
No 200
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1e-33 Score=326.78 Aligned_cols=264 Identities=20% Similarity=0.237 Sum_probs=196.4
Q ss_pred HHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCC----
Q 001171 834 EATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPP---- 905 (1133)
Q Consensus 834 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 905 (1133)
...++|++.+.||+|+||.||+|... .++.||||++...... ...+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 35678999999999999999999764 5889999998653322 356778999999999999999999886432
Q ss_pred -CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCc
Q 001171 906 -DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGL 984 (1133)
Q Consensus 906 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 984 (1133)
...++||||++ +++.+.+.. .+++..+..++.|+++||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 23589999996 467776653 277888889999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhc----
Q 001171 985 DRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG---- 1060 (1133)
Q Consensus 985 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~---- 1060 (1133)
++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+.+.....
T Consensus 166 ~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 166 ARTAGT----SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred cccCCC----ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 864321 112234578999999999998889999999999999999999999997655433333222211100
Q ss_pred ----------------ccc-----ccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1061 ----------------QIS-----ELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1061 ----------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... ............. ..........+++.+|++.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSE-HNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccc-cccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000 0000000000000 000001122489999999999999999999986
No 201
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.6e-34 Score=331.99 Aligned_cols=253 Identities=21% Similarity=0.334 Sum_probs=193.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+|..+ +++.||+|++.... .....+.+|++++.+++||+|+++++.+... ...++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~-~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK-RNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CEEEEE
Confidence 36889999999999999999775 58999999986422 2245678899999999999999999998876 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||+++.....
T Consensus 80 ~E~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 80 MEFLPGGDMMTLLMKKD-----TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred EeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 99999999999997643 3788899999999999999999999999999999999999999999999998643221
Q ss_pred CCC--------------------------------CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCC
Q 001171 992 PAE--------------------------------ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRK 1039 (1133)
Q Consensus 992 ~~~--------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~ 1039 (1133)
... .......+||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 100 001123579999999999999999999999999999999999999
Q ss_pred CCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCC---HHHHHHH
Q 001171 1040 PVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS---MADIVFM 1110 (1133)
Q Consensus 1040 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs---~~evl~~ 1110 (1133)
||...........+....... .+.+.. .... .+.+++.+|+ .||.+|++ +.|++++
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~~----~~p~~~----~~s~------~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 235 PFCSETPQETYRKVMNWKETL----VFPPEV----PISE------KAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCHHHHHHHHHcCCCce----ecCCCC----CCCH------HHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 997666554443332210000 011100 0011 1225666665 49999985 6777755
No 202
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.7e-34 Score=325.67 Aligned_cols=236 Identities=25% Similarity=0.405 Sum_probs=184.4
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHH-HHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAE-ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||+||+|.++ +|+.||+|++..... ....+.+|.. +++.++||||+++++++... +..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~-~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA-DKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC-CEEEEEEcCCC
Confidence 46999999999999875 689999999864321 2234445544 56789999999999998776 45599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++.... .+++..+..++.||++||+|||++||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~---~~ 151 (323)
T cd05575 80 GGELFFHLQRER-----SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH---SK 151 (323)
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC---CC
Confidence 999999987632 3788889999999999999999999999999999999999999999999998643211 12
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+....+... .. .+.+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~----~~--~~~~~~------ 219 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK----PL--RLKPNI------ 219 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC----CC--CCCCCC------
Confidence 233456899999999999989999999999999999999999999766555444333221 00 001100
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMA 1105 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~ 1105 (1133)
. ....+++.+|++.||.+||++.
T Consensus 220 ~------~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 220 S------VSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred C------HHHHHHHHHHhhcCHHhCCCCC
Confidence 1 1123788899999999999884
No 203
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.8e-33 Score=310.24 Aligned_cols=251 Identities=26% Similarity=0.434 Sum_probs=200.6
Q ss_pred cccccccceeEEEEEECC----ceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|.... +..|++|.+...... .+.+.+|++++++++|+|++++++++... ...++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE-EPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC-CceEEEEEecc
Confidence 469999999999997754 788999999765443 57889999999999999999999999874 55599999999
Q ss_pred CCCHHHHHHhhccC----CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 917 NGNLATLLQEASHQ----DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
+++|.+++...... ....+++..++.++.|++.|++|||+++|+||||||+||++++++.++++|||.++......
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence 99999999874211 12458999999999999999999999999999999999999999999999999987654322
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
. ........++..|+|||.+.+..++.++||||+||++|||++ |..||......+..+.+... ..... +
T Consensus 160 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----~~~~~--~--- 229 (262)
T cd00192 160 Y-YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG----YRLPK--P--- 229 (262)
T ss_pred c-cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC----CCCCC--C---
Confidence 1 122334567889999999988889999999999999999999 69999776655554444331 10000 0
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
... -....+++.+|+..+|++||++.|++++|+
T Consensus 230 ---~~~-----~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 230 ---EYC-----PDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---ccC-----ChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 000 012237888999999999999999999875
No 204
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.4e-33 Score=316.12 Aligned_cols=265 Identities=21% Similarity=0.270 Sum_probs=195.2
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhc---cCCCeeeEEEEEeCC----CC
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKV---KHRNLTVLRGYYAGP----PD 906 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l---~hpniv~l~~~~~~~----~~ 906 (1133)
+|++.+.||+|+||.||+|..+ +|+.||+|.+..... ....+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5888999999999999999775 689999999864322 134566788887776 699999999988642 23
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
..++||||++ ++|.+++..... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP---PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 4589999996 589888876432 347899999999999999999999999999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc---cc
Q 001171 987 LAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ---IS 1063 (1133)
Q Consensus 987 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---~~ 1063 (1133)
..... .......|+..|+|||++.+..++.++||||+||++|||++|++||......+....+........ .+
T Consensus 157 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 157 IYSCQ----MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccCc----ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 54221 122335688999999999888899999999999999999999999976655544444433221111 00
Q ss_pred cccc---CCcCCCCCC-Chh-HHHHH-HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1064 ELLE---PGLLELDPE-SSE-WEEFL-LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1064 ~~~~---~~~~~~~~~-~~~-~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.... ......... ... ...+. ...+++.+|++.||++||++.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 000000000 000 00111 12389999999999999999999854
No 205
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.1e-33 Score=315.16 Aligned_cols=258 Identities=24% Similarity=0.391 Sum_probs=200.0
Q ss_pred cCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
.+|...++||+|+||.||+|... ++..+|+|.+..... ..+.+.+|++++++++||||+++++++.... ..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR-PLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC-ceE
Confidence 46788899999999999999642 367899998864332 2467899999999999999999999988764 459
Q ss_pred EEEeccCCCCHHHHHHhhccC----------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEE
Q 001171 910 LVYDYMPNGNLATLLQEASHQ----------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHL 979 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl 979 (1133)
+||||+++++|.+++...+.. ....+++..+..++.|++.|++|||+.||+||||||+||++++++.+++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL 163 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKI 163 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEE
Confidence 999999999999999864321 1134788999999999999999999999999999999999999999999
Q ss_pred eccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhh
Q 001171 980 SEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQ 1058 (1133)
Q Consensus 980 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~ 1058 (1133)
+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||......+....+.+...
T Consensus 164 ~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 242 (280)
T cd05092 164 GDFGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRE 242 (280)
T ss_pred CCCCceeEcCCCce-eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCcc
Confidence 99999864432111 111223345678999999988889999999999999999998 9999965555444333322110
Q ss_pred hccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1059 RGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
... ... .. ....+++.+||+.||.+||++.||++.|++
T Consensus 243 ----~~~-~~~------~~------~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 243 ----LER-PRT------CP------PEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ----CCC-CCC------CC------HHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 000 000 00 112378899999999999999999999874
No 206
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9.5e-34 Score=320.52 Aligned_cols=265 Identities=18% Similarity=0.308 Sum_probs=197.0
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|.+.+.||+|+||.||+|+.+ +++.||+|++..... ....+.+|++++++++||||+++++++.... ..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK-SLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC-eEEEEEe
Confidence 57899999999999999999775 578899999864322 2346778999999999999999999998764 4599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|++ +++.+++...+ ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 158 (309)
T cd07872 85 YLD-KDLKQYMDDCG----NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT- 158 (309)
T ss_pred CCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-
Confidence 996 58888886543 347888899999999999999999999999999999999999999999999986432211
Q ss_pred CCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc---cc-----
Q 001171 994 EASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI---SE----- 1064 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~----- 1064 (1133)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+....+.+....... +.
T Consensus 159 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 159 --KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred --cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 12233467889999999865 45789999999999999999999999776655544444333221110 00
Q ss_pred -cccCCcCCCCCCC--hhHHHHH-HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 -LLEPGLLELDPES--SEWEEFL-LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 -~~~~~~~~~~~~~--~~~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
..+.......+.. ....... ...+++.+|++.||.+|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000000000000 0000011 12379999999999999999999874
No 207
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.4e-34 Score=321.22 Aligned_cols=264 Identities=22% Similarity=0.323 Sum_probs=203.9
Q ss_pred hcCCCcccccccccceeEEEEEEC--------CceEEEEEEcccCCc--CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCC
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ--------DGMVLSIRRLRDGTI--DENTFRKEAEALGKV-KHRNLTVLRGYYAGP 904 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 904 (1133)
.++|.+.++||+|+||.||+|... .+..||+|.+..... ..+.+.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 457889999999999999999652 246789999875332 235678899999999 699999999998765
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhcc-----------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEASH-----------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA 973 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~ 973 (1133)
...++||||+++|+|.+++..... .....+++..+..++.||+.|++|||++||+||||||+||+++.
T Consensus 91 -~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 91 -GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 445999999999999999976432 11245888999999999999999999999999999999999999
Q ss_pred CCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHH
Q 001171 974 DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKW 1052 (1133)
Q Consensus 974 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 1052 (1133)
++.+|++|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||......+....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~ 248 (314)
T cd05099 170 DNVMKIADFGLARGVHDIDYY-KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL 248 (314)
T ss_pred CCcEEEccccccccccccccc-cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999998754322111 11112234567999999988889999999999999999999 8999976655554444
Q ss_pred HHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCC
Q 001171 1053 VKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGP 1118 (1133)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~ 1118 (1133)
+... ...+. +... . ....+++.+|++.||++||++.|+++.|+++....
T Consensus 249 ~~~~----~~~~~--------~~~~---~--~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 249 LREG----HRMDK--------PSNC---T--HELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HHcC----CCCCC--------CCCC---C--HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 3221 11110 0000 0 11227889999999999999999999999887543
No 208
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.4e-34 Score=314.98 Aligned_cols=259 Identities=20% Similarity=0.348 Sum_probs=200.9
Q ss_pred cCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+|.. .+++.+|||.+..... ..+.+.+|++++++++||||+++++++.... ..++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-ELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC-eEEEE
Confidence 4688899999999999999976 4789999998764221 2357888999999999999999999987754 45899
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++++|.+++..... ....+++..++.++.||+.|++|||++|++|+||||+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 81 LELADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 999999999999875432 2345889999999999999999999999999999999999999999999999988654221
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
. .......|+..|+|||++.+..++.++||||||+++|+|++|..||...... ..... +...........
T Consensus 160 ~---~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~-~~~~~~~~~~~~----- 229 (267)
T cd08229 160 T---TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLC-KKIEQCDYPPLP----- 229 (267)
T ss_pred C---cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHh-hhhhcCCCCCCC-----
Confidence 1 1122346888999999998888999999999999999999999999643321 11111 111111111000
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
.. .... ...+++.+||+.||.+|||+.+|++.++++
T Consensus 230 ---~~--~~~~--~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 230 ---SD--HYSE--ELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ---cc--cccH--HHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 00 0111 122788899999999999999999999875
No 209
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.4e-33 Score=315.17 Aligned_cols=251 Identities=22% Similarity=0.320 Sum_probs=196.8
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.|+..++||+|+||+||+|.+. +++.||+|.+...... ...+.+|++++++++|++++.+.+++... +..++||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-~~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK-DALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC-CEEEEEE
Confidence 3677789999999999999774 6899999998643321 24567899999999999999999888775 4569999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++++|.+++...+. ..+++..+..++.|++.|++|||++||+||||||+||+++.++.++++|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~- 155 (285)
T cd05632 80 TIMNGGDLKFHIYNMGN---PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG- 155 (285)
T ss_pred EeccCccHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-
Confidence 99999999988875432 24899999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.......|+..|+|||++.+..++.++|+||+||++|||++|+.||...........+.+...... .......
T Consensus 156 ---~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-- 228 (285)
T cd05632 156 ---ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--EVYSAKF-- 228 (285)
T ss_pred ---CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc--cccCccC--
Confidence 112345689999999999888899999999999999999999999976554433333333322211 0011000
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCC-----HHHHHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPS-----MADIVFM 1110 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~~ 1110 (1133)
.. ...+++.+|++.||++||+ +.+++++
T Consensus 229 --------~~--~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 229 --------SE--EAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --------CH--HHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00 1237888999999999999 6777764
No 210
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.2e-34 Score=330.44 Aligned_cols=263 Identities=20% Similarity=0.288 Sum_probs=196.5
Q ss_pred CCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCC----CcEE
Q 001171 838 QFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPP----DVRL 909 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~~ 909 (1133)
+|++.++||+|+||.||+|.. .+|+.||+|++..... ..+.+.+|+++++.++||||+++++++.... ...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999976 4689999999864322 2457889999999999999999999987653 2458
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||+. ++|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP-----QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999995 6788877542 348899999999999999999999999999999999999999999999999987542
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccc---
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISEL--- 1065 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--- 1065 (1133)
... ........+++.|+|||++.+. .++.++||||+||++|||++|+.||...+..+....+.+........+.
T Consensus 155 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 155 PDE--SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cCc--cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 221 1122334678899999998764 4789999999999999999999999776655444443332211110000
Q ss_pred -------ccCCcCCCC------CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1066 -------LEPGLLELD------PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1066 -------~~~~~~~~~------~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+........ ...... .....+++.+|++.||++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQA--THEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCC--CHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000000 000000 1122379999999999999999999975
No 211
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.5e-33 Score=315.61 Aligned_cols=259 Identities=24% Similarity=0.403 Sum_probs=201.1
Q ss_pred hcCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 907 (1133)
.++|++.+.||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|++++++++|||++++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~- 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP- 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc-
Confidence 457899999999999999999763 468899999875432 24568899999999999999999999887644
Q ss_pred EEEEEeccCCCCHHHHHHhhcc-----------------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCcccee
Q 001171 908 RLLVYDYMPNGNLATLLQEASH-----------------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVL 970 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIl 970 (1133)
.++||||+++|+|.+++..... .....+++..++.++.|++.||+|||+.+++||||||+||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 4999999999999999975431 11124778889999999999999999999999999999999
Q ss_pred eCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhH
Q 001171 971 FDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDI 1049 (1133)
Q Consensus 971 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~ 1049 (1133)
++.++.++++|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||......+.
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~ 241 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADY-YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV 241 (288)
T ss_pred ecCCCceEECccccceecccCcc-ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999864422211 111122334667999999988889999999999999999998 8889876555544
Q ss_pred HHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1050 VKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
...+.. +...... .. . .....+++.+|++.||++||++.|+++.|++
T Consensus 242 ~~~~~~----~~~~~~~--------~~---~--~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 242 IYYVRD----GNVLSCP--------DN---C--PLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHhc----CCCCCCC--------CC---C--CHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 433322 1111000 00 0 0122378999999999999999999999874
No 212
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.1e-33 Score=310.90 Aligned_cols=260 Identities=20% Similarity=0.347 Sum_probs=202.4
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+|... +|+.||+|.++... ...+.+.+|++++++++|++++++++++... +..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~-~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN-NELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC-CeEEEE
Confidence 57899999999999999999876 78999999885321 1246788999999999999999999999876 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++..... ....+++..+..++.+++.|++|||+.||+||||||+||+++.++.++++|||+++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 81 LELADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 999999999999876432 2244789999999999999999999999999999999999999999999999998654221
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
. .......++..|+|||++.+..++.++||||+||++|+|++|+.||..... ...+.. +.............
T Consensus 160 ~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~-~~~~~~~~~~~~~~--- 231 (267)
T cd08224 160 T---TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLC-KKIEKCDYPPLPAD--- 231 (267)
T ss_pred C---cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-cHHHHH-hhhhcCCCCCCChh---
Confidence 1 112234678899999999888899999999999999999999999954331 111111 11111111111000
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
.... ...+++.+||..+|++||++.+|++.|++..
T Consensus 232 -------~~~~--~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 232 -------HYSE--ELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -------hcCH--HHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0011 1227889999999999999999999998753
No 213
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.2e-33 Score=315.40 Aligned_cols=251 Identities=21% Similarity=0.300 Sum_probs=193.9
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.|+..++||+|+||.||+|.+. +++.||+|.+...... .+.+.+|+.++++++|++++.+++.+.... ..++||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC-EEEEEE
Confidence 3677889999999999999765 6899999998643221 245678999999999999999999987764 569999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++++|.+++...+. ..+++..+..++.|++.|++|||+.+|+||||||+||+++.++.++++|||++......
T Consensus 80 e~~~g~~L~~~l~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~- 155 (285)
T cd05630 80 TLMNGGDLKFHIYHMGE---AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG- 155 (285)
T ss_pred EecCCCcHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-
Confidence 99999999999865432 34888999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||................... .......
T Consensus 156 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~--- 227 (285)
T cd05630 156 ---QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV--QEEYSEK--- 227 (285)
T ss_pred ---ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh--hhhcCcc---
Confidence 11223468999999999998899999999999999999999999997543221111111111100 0000000
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCC-----HHHHHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPS-----MADIVFM 1110 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~~ 1110 (1133)
... ...+++.+||+.||++||+ +.|++++
T Consensus 228 ---~~~------~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 228 ---FSP------DARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred ---CCH------HHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 000 1227888999999999999 8898874
No 214
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-33 Score=321.89 Aligned_cols=263 Identities=23% Similarity=0.308 Sum_probs=203.4
Q ss_pred hcCCCcccccccccceeEEEEEEC--------CceEEEEEEcccCCcC--HHHHHHHHHHHhhc-cCCCeeeEEEEEeCC
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ--------DGMVLSIRRLRDGTID--ENTFRKEAEALGKV-KHRNLTVLRGYYAGP 904 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 904 (1133)
..+|++.+.||+|+||.||+|++. .+..||+|.+...... .+.+.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 346899999999999999999652 1347899988643322 35788999999999 899999999999876
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhcc-----------CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEASH-----------QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA 973 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~ 973 (1133)
. ..++||||+++|+|.+++..... ..+..+++..+..++.|++.|++|||++||+||||||+||+++.
T Consensus 91 ~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 91 G-PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred C-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 4 45999999999999999986431 12345888999999999999999999999999999999999999
Q ss_pred CCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHH
Q 001171 974 DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKW 1052 (1133)
Q Consensus 974 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~ 1052 (1133)
++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||.....++....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 248 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDY-YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 248 (334)
T ss_pred CCcEEECCcccceecccccc-cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 99999999999875432111 111222334567999999988889999999999999999998 8899976655554433
Q ss_pred HHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCC
Q 001171 1053 VKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVG 1117 (1133)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~ 1117 (1133)
+... ...+... ... ....+++.+||+.+|++||++.|+++.|+.+...
T Consensus 249 ~~~~----~~~~~~~-------~~~------~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 249 LKEG----HRMDKPA-------NCT------HELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred HHcC----CCCCCCC-------CCC------HHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 3221 1111000 000 1123788999999999999999999999988743
No 215
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.8e-33 Score=316.30 Aligned_cols=263 Identities=21% Similarity=0.349 Sum_probs=197.5
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|++.++||+|+||.||+|.+. ++..+|+|.+..... ....+.+|++++++++||||+++++++... +..++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD-GEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-CEEEEEee
Confidence 36889999999999999999775 588899998864322 235688899999999999999999999876 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|+++++|.++++..+ .+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++++|||++......
T Consensus 80 y~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 80 HMDGGSLDQVLKKAG-----RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred ccCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 999999999998642 37888999999999999999997 58999999999999999999999999998643221
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc--
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL-- 1070 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1070 (1133)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...+.........................
T Consensus 154 ----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 154 ----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred ----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCC
Confidence 12345688999999999888899999999999999999999999965543333322211111000000000000
Q ss_pred ------------------CCCCCCChhHHHHH-HhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1071 ------------------LELDPESSEWEEFL-LGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1071 ------------------~~~~~~~~~~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
....+.... ..+. ...+++.+|+..||++||++.|++++-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPS-GAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcC-cccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000000000 0011 133889999999999999999999773
No 216
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.8e-33 Score=321.10 Aligned_cols=254 Identities=22% Similarity=0.318 Sum_probs=192.1
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.++||+|+||.||+++++ .++.||+|++.+.. .....+.+|+.++..++|++|+++++++... ...++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE-NNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-CEEEEE
Confidence 36899999999999999999876 47889999985421 1234578899999999999999999998876 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++.+.. ..+++..+..++.||+.|++|||+++|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~ey~~~g~L~~~l~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 80 MDYYVGGDLLTLLSKFE----DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred EeccCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 99999999999998643 23788889999999999999999999999999999999999999999999998644221
Q ss_pred CCCCCCCCCCCCCCCccCccccC-----CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAAS-----TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
. ........||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+....+........++.
T Consensus 156 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-- 231 (332)
T cd05623 156 G--TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPA-- 231 (332)
T ss_pred C--cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCC--
Confidence 1 11223357999999999985 34578999999999999999999999976655444433322111111110
Q ss_pred cCCcCCCCCCChhHHHHHHhHhhhhccCCCCCC--CCCCHHHHHHH
Q 001171 1067 EPGLLELDPESSEWEEFLLGVKVGLLCTAPDPL--DRPSMADIVFM 1110 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~--~RPs~~evl~~ 1110 (1133)
... .... ...+++.+|+..++. .|+++.|++++
T Consensus 232 --~~~---~~s~------~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 232 --QVT---DVSE------DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred --ccc---cCCH------HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 000 0011 112567777655444 47899999877
No 217
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.5e-33 Score=308.30 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=198.9
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.+.||+|++|.||++..+ +++.||+|++..... ..+.+.+|++++++++|||++++++.+...+...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4889999999999999999765 578899999864332 245688999999999999999999988765556689999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++.... ...+++..+..++.+++.|++|||+.||+||||||+||+++.++.++++|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 999999999997632 2348899999999999999999999999999999999999999999999999987543221
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......+++.|+|||+..+..++.++||||+||++|+|++|+.||...+.......+.. +..... .
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~----~~~~~~-~------ 223 (257)
T cd08223 157 --DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE----GKLPPM-P------ 223 (257)
T ss_pred --CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh----cCCCCC-c------
Confidence 122345688999999999988899999999999999999999999975554333222211 111110 0
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. .. ....+++.+|++.||++||++.|++++
T Consensus 224 -~~---~~--~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 224 -KD---YS--PELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred -cc---cC--HHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 00 122378999999999999999999864
No 218
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=7.8e-34 Score=312.93 Aligned_cols=252 Identities=25% Similarity=0.422 Sum_probs=197.6
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHH---HHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENT---FRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~---~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
|++.+.||+|+||+||+++.. +++.||+|++......... ..+|+.++++++||||+++++++... ...++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD-NYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES-SEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc-ccccccccc
Confidence 677899999999999999876 5779999999766544333 34599999999999999999999875 455899999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+++++|.+++... ..+++..+..++.|+++||+|||+.+|+|+||||+||+++.++.++++|||.+... ...
T Consensus 80 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~---~~~ 151 (260)
T PF00069_consen 80 CPGGSLQDYLQKN-----KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKL---SEN 151 (260)
T ss_dssp ETTEBHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEES---TST
T ss_pred ccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccc
Confidence 9999999999843 23789999999999999999999999999999999999999999999999998643 112
Q ss_pred CCCCCCCCCCCCccCccccC-CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAAS-TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
........++..|+|||++. +..++.++||||+|+++|+|++|..||......+....+.+.............
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 226 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQS----- 226 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSH-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccccc-----
Confidence 22334567889999999998 788899999999999999999999999866333333333332221100000000
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
........+++.+|++.||++||++.|++++
T Consensus 227 ------~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 227 ------REKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp ------TTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ------chhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000223378999999999999999999863
No 219
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.5e-33 Score=309.88 Aligned_cols=252 Identities=21% Similarity=0.282 Sum_probs=192.3
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc------CHHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI------DENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVR 908 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~ 908 (1133)
.+|++.++||+|+||.||+|..+ +|..||+|.+..... ..+.+.+|++++++++||||+++++++.+. ....
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46889999999999999999775 589999998853221 124678899999999999999999988654 3456
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
++||||+++++|.+++.... .+++.....++.|++.||+|||+.+|+|+||||+||+++.++.++++|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-----ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 79999999999999987542 2678888899999999999999999999999999999999999999999998754
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
..............|+..|+|||++.+..++.++|||||||++|||++|+.||......... .+...... .+
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~-----~~ 228 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAI---FKIATQPT-----NP 228 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHH---HHHhcCCC-----CC
Confidence 32211112223346888999999998888999999999999999999999999654322221 11111100 00
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. +. .......+++.+|+. +|++||+++||+++
T Consensus 229 ~~---~~-----~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 229 VL---PP-----HVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CC---ch-----hhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 00 00 001112267778884 89999999999864
No 220
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.2e-34 Score=313.69 Aligned_cols=254 Identities=20% Similarity=0.344 Sum_probs=195.0
Q ss_pred hcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCC-cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGT-IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++++++||||+++++++... +..++|||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~-~~~~iv~e 86 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR-EKLWICME 86 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-CEEEEEEe
Confidence 45799999999999999999976 468899999986433 2345678899999999999999999998766 45589999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.++++... .+++..+..++.|++.|++|||+.+|+|||+||+||+++.++.++++|||+++......
T Consensus 87 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06646 87 YCGGGSLQDIYHVTG-----PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI- 160 (267)
T ss_pred CCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc-
Confidence 999999999987532 37889999999999999999999999999999999999999999999999987542211
Q ss_pred CCCCCCCCCCCCCccCccccC---CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 994 EASSSTTPIGSLGYVSPEAAS---TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
.......|+..|+|||.+. ...++.++||||+||++|||++|+.||...........+.. .. ...+..
T Consensus 161 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~----~~---~~~~~~ 231 (267)
T cd06646 161 --AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK----SN---FQPPKL 231 (267)
T ss_pred --cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec----CC---CCCCCC
Confidence 1223346888999999874 34478899999999999999999999854332211111000 00 000001
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.. ...+. ....+++.+||+.||++||+++++++++
T Consensus 232 ~~----~~~~~--~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 KD----KTKWS--STFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred cc----ccccC--HHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00 00111 1223789999999999999999998764
No 221
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.7e-33 Score=321.14 Aligned_cols=254 Identities=25% Similarity=0.358 Sum_probs=191.2
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccC----CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG----TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+++.. +++.||+|++.+. ....+.+.+|..+++.++||||+++++++... ...++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE-NNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC-CeEEEE
Confidence 47899999999999999999875 5899999998642 12245688899999999999999999998876 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++.+.. ..+++..+..++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 80 MDYYVGGDLLTLLSKFE----DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred EecCCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 99999999999997632 23788899999999999999999999999999999999999999999999998654221
Q ss_pred CCCCCCCCCCCCCCCccCccccCC-----CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAAST-----GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
. ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+........ +
T Consensus 156 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~ 229 (331)
T cd05597 156 G--TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ----F 229 (331)
T ss_pred C--CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc----C
Confidence 1 112223468999999999863 4578899999999999999999999976554443333222110000 0
Q ss_pred cCCcCCCCCCChhHHHHHHhHhhhhccCCC--CCCCCCCHHHHHHH
Q 001171 1067 EPGLLELDPESSEWEEFLLGVKVGLLCTAP--DPLDRPSMADIVFM 1110 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~--dP~~RPs~~evl~~ 1110 (1133)
.+.... .... ..+++.+|+.. ++..||++.+++++
T Consensus 230 ~~~~~~---~~~~------~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 230 PPDVTD---VSEE------AKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCccCC---CCHH------HHHHHHHHccCcccccCCCCHHHHhcC
Confidence 110000 0111 12556665544 44448899999877
No 222
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.3e-33 Score=315.08 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=199.3
Q ss_pred HHHHHHHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeC---
Q 001171 829 YVETLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAG--- 903 (1133)
Q Consensus 829 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~--- 903 (1133)
..+...+.+.|++.++||+|+||.||+|.+. +++.||+|.+.........+..|+.+++++ +|||++++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 87 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP 87 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence 3444556778999999999999999999774 588999999866554556788999999999 79999999998853
Q ss_pred --CCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEec
Q 001171 904 --PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSE 981 (1133)
Q Consensus 904 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~D 981 (1133)
.....++||||+++|+|.+++..... ..+++..+..++.||+.|++|||+.+|+||||||+||+++.++.++++|
T Consensus 88 ~~~~~~~~iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 88 PGHDDQLWLVMEFCGAGSVTDLVKNTKG---NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred cCCCCEEEEEEEeCCCCcHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEee
Confidence 23456899999999999999976432 3477888889999999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCCCCCCCCCCCCCccCccccC-----CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHH
Q 001171 982 FGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS-----TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQ 1056 (1133)
Q Consensus 982 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~ 1056 (1133)
||++...... ........|+..|+|||++. +..++.++||||+||++|||++|+.||...........+
T Consensus 165 fg~~~~~~~~---~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~--- 238 (282)
T cd06636 165 FGVSAQLDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI--- 238 (282)
T ss_pred Ccchhhhhcc---ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhH---
Confidence 9998644221 11223456889999999975 345788999999999999999999999654332211111
Q ss_pred hhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1057 LQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
......... .. .+. ....+++.+||+.||.+||++.|++++
T Consensus 239 -~~~~~~~~~--------~~--~~~--~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 239 -PRNPPPKLK--------SK--KWS--KKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred -hhCCCCCCc--------cc--ccC--HHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 111000000 00 001 112378999999999999999999753
No 223
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.5e-33 Score=309.82 Aligned_cols=251 Identities=20% Similarity=0.378 Sum_probs=195.8
Q ss_pred CCCcccccccccceeEEEEEECCceEEEEEEcccCCcC-------HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID-------ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
+|++.+.||+|+||.||+|...+|+.+|+|.+...... .+.+.+|++++++++|+||+++++++.+. ...++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD-NTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-CeEEE
Confidence 47889999999999999998888999999988643211 24678899999999999999999999876 55699
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++++|.+++.+.. .+++..+..++.|++.|++|||+.+|+|+||||+||++++++.++++|||.+.....
T Consensus 80 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 80 FMEFVPGGSISSILNRFG-----PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EEecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 999999999999997642 378888999999999999999999999999999999999999999999999875422
Q ss_pred CCC---CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 991 TPA---EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 991 ~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
... .........|+..|+|||++.+..++.++||||+||++|+|++|+.||...+.......+.. .....+.. .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~-~ 231 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGA--HRGLMPRL-P 231 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhh--ccCCCCCC-C
Confidence 111 11112334688999999999888899999999999999999999999965433221111111 11111111 0
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
. . .. ....+++.+||+.+|++||++.|+++
T Consensus 232 ~-------~---~~--~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 232 D-------S---FS--AAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred C-------C---CC--HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 0 00 11237889999999999999999975
No 224
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-33 Score=328.97 Aligned_cols=262 Identities=21% Similarity=0.262 Sum_probs=194.5
Q ss_pred hcCCCcccccccccceeEEEEEEC---CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ---DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
..+|.+.+.||+|+||.||++... .+..||+|.+... +...+|++++++++||||+++++++... ...++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~-~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWK-STVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeC-CEEEEEe
Confidence 457999999999999999999653 3678999988643 3457899999999999999999988765 4458999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|++. ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||+++......
T Consensus 166 e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYK-CDLFTYVDRS-----GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 9994 7888888542 348999999999999999999999999999999999999999999999999986543221
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhh---HHHHHHHHhhhccc--cc---
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED---IVKWVKKQLQRGQI--SE--- 1064 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~---~~~~~~~~~~~~~~--~~--- 1064 (1133)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.+..+.... +.
T Consensus 240 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 240 D-TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred c-cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 1 122234579999999999998899999999999999999999999996543322 22222222111100 00
Q ss_pred ------------cccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 ------------LLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 ------------~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
...+... .+........-....+++.+|+..||++||++.|++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYT-IPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hhHHHHHHhhcccccCCcc-ccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000 00000000000122368899999999999999999976
No 225
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.3e-33 Score=310.93 Aligned_cols=250 Identities=24% Similarity=0.379 Sum_probs=192.4
Q ss_pred cccccccceeEEEEEECC-c--eEEEEEEcccCC--cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQD-G--MVLSIRRLRDGT--IDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~-g--~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|..++ + ..+|+|.+.... ...+.+.+|+++++++ +||||+++++++.... ..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-YLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC-CceEEEEeCC
Confidence 469999999999998753 4 357888886432 2245788999999999 8999999999998764 4599999999
Q ss_pred CCCHHHHHHhhccC-----------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 917 NGNLATLLQEASHQ-----------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
+|+|.+++...+.. ....+++..+..++.|++.|++|||+.|++||||||+||++++++.+|++|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 99999999764321 1234788999999999999999999999999999999999999999999999997
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
+.... .........+..|+|||++....++.++|||||||++|||++ |+.||...+..+....+.... ..+
T Consensus 160 ~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~----~~~ 231 (270)
T cd05047 160 RGQEV----YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY----RLE 231 (270)
T ss_pred cccch----hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC----CCC
Confidence 53211 111112234567999999988889999999999999999997 999997655544443332210 000
Q ss_pred cccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1065 LLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
..... .....+++.+||+.+|.+||++.|+++.|+++
T Consensus 232 --------~~~~~-----~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 232 --------KPLNC-----DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred --------CCCcC-----CHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 00000 01123789999999999999999999999864
No 226
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.2e-33 Score=317.79 Aligned_cols=200 Identities=21% Similarity=0.345 Sum_probs=161.2
Q ss_pred ccccccccceeEEEEEEC---CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeC-CCCcEEEEEeccCC
Q 001171 842 ENVLSRGRYGLIFKASYQ---DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAG-PPDVRLLVYDYMPN 917 (1133)
Q Consensus 842 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~~lV~e~~~~ 917 (1133)
+.+||+|+||.||+|+.+ ++..||+|.+..... ...+.+|++++++++||||+++++++.. .+...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 357999999999999865 357899999865432 3567889999999999999999998854 3445689999985
Q ss_pred CCHHHHHHhhcc----CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceee----CCCCceEEeccCcccccc
Q 001171 918 GNLATLLQEASH----QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLF----DADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 918 gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~ 989 (1133)
++|.+++..... .....+++..+..++.||+.||+|||+.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence 578888764321 112347888899999999999999999999999999999999 566789999999997654
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCcc
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMF 1043 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~ 1043 (1133)
.............||+.|+|||++.+ ..++.++||||+||++|||++|++||..
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 33222223344578999999999876 4578999999999999999999999964
No 227
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=6.8e-34 Score=323.31 Aligned_cols=236 Identities=23% Similarity=0.387 Sum_probs=183.3
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHH-HHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAE-ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|++. +|+.||+|++.+... ....+.+|.. +++.++||||+++++++... +..++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~-~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA-EKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC-CEEEEEEcCCC
Confidence 46999999999999875 588999999864321 2234455554 67889999999999988776 45599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|..++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~---~~ 151 (321)
T cd05603 80 GGELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP---EE 151 (321)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC---CC
Confidence 99999888753 23778888899999999999999999999999999999999999999999998643211 12
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...+.......+... .. ..+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~----~~---------~~~~~ 218 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK----PL---------QLPGG 218 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC----CC---------CCCCC
Confidence 233457899999999998888999999999999999999999999766554443333211 00 01111
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMA 1105 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~ 1105 (1133)
.. ....+++.+|++.||.+||++.
T Consensus 219 ~~-----~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 219 KT-----VAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CC-----HHHHHHHHHHccCCHhhcCCCC
Confidence 00 1123788999999999999764
No 228
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2e-33 Score=311.59 Aligned_cols=256 Identities=22% Similarity=0.359 Sum_probs=200.3
Q ss_pred cCCCcccccccccceeEEEEEECC----ceEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQD----GMVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.+|++.++||+|+||.||+|.+.+ ...||+|...... ...+.+.+|++++++++|||++++++++... ..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~l 83 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN--PVWI 83 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC--CcEE
Confidence 468889999999999999997643 2468999886443 2245788999999999999999999988753 3489
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++|+|.+++.... ..+++..+..++.+++.|++|||+.+++||||||+||+++.++.++++|||+++....
T Consensus 84 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 84 VMELAPLGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEcCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 999999999999997643 2378999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
... .......++..|+|||.+....++.++|||||||++||+++ |+.||......+....+.... .. ..
T Consensus 160 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---~~-~~---- 229 (270)
T cd05056 160 ESY--YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE---RL-PM---- 229 (270)
T ss_pred ccc--eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC---cC-CC----
Confidence 211 11122334568999999988889999999999999999986 999997666554444332211 00 00
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCC
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVG 1117 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~ 1117 (1133)
..... ....+++.+|+..+|++||++.++++.|+.+...
T Consensus 230 ----~~~~~-----~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 230 ----PPNCP-----PTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ----CCCCC-----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00100 1123688899999999999999999999986653
No 229
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.8e-33 Score=311.32 Aligned_cols=258 Identities=22% Similarity=0.396 Sum_probs=200.4
Q ss_pred cCCCcccccccccceeEEEEEEC------CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ------DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 908 (1133)
++|++.+.||+|+||.||+|+.+ ..+.|++|.+...... .+.+.+|++++++++|||++++++++... ...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA-EPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC-Ccc
Confidence 57889999999999999999864 2467899988643332 36789999999999999999999998765 445
Q ss_pred EEEEeccCCCCHHHHHHhhccCC----CCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQD----GHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGL 984 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 984 (1133)
++||||+++|+|.+++....... ...+++..+..++.|++.|++|||+.+|+||||||+||+++.++.++++|||+
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccc
Confidence 99999999999999998654211 12489999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcccc
Q 001171 985 DRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQIS 1063 (1133)
Q Consensus 985 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 1063 (1133)
++...... ........++..|+|||.+.+..++.++||||+|+++|+|++ |..||............... ...
T Consensus 164 ~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~----~~~ 237 (275)
T cd05046 164 SKDVYNSE--YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG----KLE 237 (275)
T ss_pred ccccCccc--ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC----CcC
Confidence 86432211 112233456778999999988888999999999999999999 88899665554444433221 111
Q ss_pred ccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1064 ELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
..... . ... ...+++.+|++.+|++||++.|++++|.+
T Consensus 238 ~~~~~------~----~~~--~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 238 LPVPE------G----CPS--RLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CCCCC------C----CCH--HHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 00000 0 001 12378999999999999999999998863
No 230
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.8e-33 Score=313.40 Aligned_cols=248 Identities=22% Similarity=0.309 Sum_probs=191.2
Q ss_pred cCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|++.++||+|+||.||+|.+ .+++.||+|.+..... ....+.+|++++++++||||+++++++.... ..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN-RISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC-EEEEEEe
Confidence 3678889999999999999976 4688999999865422 2356889999999999999999999998764 4589999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|..+. .+++..+..++.|++.|++|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-- 148 (279)
T cd06619 80 FMDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-- 148 (279)
T ss_pred cCCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence 99999986542 2678888899999999999999999999999999999999999999999998644221
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhH---HHHHHHHhhhccccccccCCc
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDI---VKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
......|+..|+|||++.+..++.++||||+||++|+|++|+.||........ .....+...... .+..
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 220 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVL 220 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCC
Confidence 22335788999999999988899999999999999999999999964322110 011111111110 0000
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
. ...... ...+++.+|++.+|++||+++|++++-
T Consensus 221 ~----~~~~~~---~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 221 P----VGQFSE---KFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred C----CCcCCH---HHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 0 000001 123788899999999999999998763
No 231
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.6e-33 Score=311.01 Aligned_cols=257 Identities=21% Similarity=0.343 Sum_probs=202.1
Q ss_pred hcCCCcccccccccceeEEEEEECC-c----eEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD-G----MVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g----~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 908 (1133)
..+|++.+.||+|+||.||+|.++. | ..||+|....... ....+.+|++++++++|||++++++++.. ...
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 83 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS--SQV 83 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--Cce
Confidence 3578899999999999999997642 3 3689998865433 23578899999999999999999999986 455
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
++||||+++|+|.+++.... ..+++..+..++.||+.|++|||+.+|+||||||+||+++.++.+|++|||+++..
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHK----DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEEEecCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 89999999999999997643 23889999999999999999999999999999999999999999999999999765
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
...... .......++..|+|||.+....++.++|+|||||++||+++ |+.||......++.+.+.+.... ..
T Consensus 160 ~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------~~ 232 (279)
T cd05057 160 DVDEKE-YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL------PQ 232 (279)
T ss_pred cCcccc-eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC------CC
Confidence 322111 11122234568999999988889999999999999999998 99999776655554444321100 00
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcC
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~ 1116 (1133)
+.. .. ....+++.+||..||.+||++.++++.|+.+..
T Consensus 233 ~~~-----~~------~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 233 PPI-----CT------IDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCC-----CC------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 000 00 112367889999999999999999999998755
No 232
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.9e-33 Score=325.16 Aligned_cols=263 Identities=18% Similarity=0.224 Sum_probs=192.8
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
..+|.+.+.||+|+||.||+|.+. .++.||||... ...+.+|++++++++|||||++++++... ...++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~-~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVVG-GLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEEC-CEEEEEEEc
Confidence 447999999999999999999876 47889999643 23467899999999999999999998765 445899999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+ .++|.+++.... ..+++..+..++.||++||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 242 ~-~~~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~- 315 (461)
T PHA03211 242 Y-RSDLYTYLGARL----RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS- 315 (461)
T ss_pred c-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc-
Confidence 9 578988886532 2489999999999999999999999999999999999999999999999999875432111
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCC--------hhhHHHHHHHHhhh-cccccc
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQ--------DEDIVKWVKKQLQR-GQISEL 1065 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~--------~~~~~~~~~~~~~~-~~~~~~ 1065 (1133)
........||..|+|||++.+..++.++|||||||++|||++|..|+.... ...+...+.+.... ..+...
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 112234569999999999999999999999999999999999887653211 11222222211000 001100
Q ss_pred ccCC-----------cCCCCCCChhHHHHH----HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1066 LEPG-----------LLELDPESSEWEEFL----LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1066 ~~~~-----------~~~~~~~~~~~~~~~----~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.... ..........|..+. ...+++.+|++.||.+|||+.|++++
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000 000000111122111 22379999999999999999999975
No 233
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.6e-33 Score=309.49 Aligned_cols=249 Identities=21% Similarity=0.312 Sum_probs=197.2
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
+|++.++||+|+||.||++... ++..||+|.+.... ...+.+.+|++++++++|||++++++++... ...++||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD-GHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC-CEEEEEEee
Confidence 4788999999999999999775 58899999885322 2346788899999999999999999998776 455999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+++|+|.+++.... ...+++.....++.|++.|+.|||++||+|+||||+||++++++.++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-- 154 (255)
T cd08219 80 CDGGDLMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-- 154 (255)
T ss_pred CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc--
Confidence 99999999887533 2347888899999999999999999999999999999999999999999999986542211
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......|+..|+|||++.+..++.++|+||+|+++|+|++|+.||...+.......+.. ...... .
T Consensus 155 -~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~-~------- 221 (255)
T cd08219 155 -AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ----GSYKPL-P------- 221 (255)
T ss_pred -cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc----CCCCCC-C-------
Confidence 122335688899999999888899999999999999999999999976554433332221 111110 0
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. ... ...+++.+||+.||++||++.|++..
T Consensus 222 ~~---~~~--~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 222 SH---YSY--ELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred cc---cCH--HHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00 001 12378999999999999999999864
No 234
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.5e-33 Score=320.85 Aligned_cols=245 Identities=20% Similarity=0.347 Sum_probs=187.8
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++.++ +||+|+.+++++.... ..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS-RLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC-EEEEEEeCCC
Confidence 46999999999999775 578999999975322 234577899999888 6999999999987764 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++...+ .+++..+..++.||+.|++|||++||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~~~L~~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~---~~ 151 (327)
T cd05617 80 GGDLMFHMQRQR-----KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP---GD 151 (327)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC---CC
Confidence 999999887643 3889999999999999999999999999999999999999999999999998643211 11
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChh---hHHHHHHHHhhhccccccccCCcCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE---DIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.+....... ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 222 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI---------RI 222 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC---------CC
Confidence 223457999999999999999999999999999999999999999532211 111222222211110 00
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCH------HHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSM------ADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~------~evl~~ 1110 (1133)
+.... ....+++.+|++.||++|+++ .+++++
T Consensus 223 p~~~~-----~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 223 PRFLS-----VKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCC-----HHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 00000 112378899999999999984 566644
No 235
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.8e-33 Score=314.73 Aligned_cols=261 Identities=21% Similarity=0.336 Sum_probs=198.8
Q ss_pred HHHHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeC----CC
Q 001171 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAG----PP 905 (1133)
Q Consensus 832 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~----~~ 905 (1133)
...+.++|++.+.||+|+||.||+|... +++.+|+|++.........+.+|+.+++++ +|||++++++++.. .+
T Consensus 13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 92 (286)
T cd06638 13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNG 92 (286)
T ss_pred CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCC
Confidence 3446789999999999999999999774 578999998865443456788999999999 69999999998742 23
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
...++||||+++++|.+++..... ....+++..+..++.|+++|+.|||+.+|+||||||+||+++.++.++++|||++
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 93 DQLWLVLELCNGGSVTDLVKGFLK-RGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHHhhc-cCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 456899999999999998875322 2245788889999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCC-----CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAAST-----GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 1060 (1133)
+..... ........|+..|+|||++.. ..++.++||||+||++|||++|+.||............ ...
T Consensus 172 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~----~~~ 244 (286)
T cd06638 172 AQLTST---RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKI----PRN 244 (286)
T ss_pred eecccC---CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhc----ccc
Confidence 654221 112233468899999999753 44788999999999999999999999654332211111 111
Q ss_pred cccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1061 QISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.......+.. +.. ...+++.+||+.||++||++.|++++.
T Consensus 245 ~~~~~~~~~~---------~~~--~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 245 PPPTLHQPEL---------WSN--EFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CCCcccCCCC---------cCH--HHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1011111110 001 123788999999999999999999763
No 236
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-33 Score=314.69 Aligned_cols=250 Identities=20% Similarity=0.328 Sum_probs=196.5
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
..+|++.+.||+|+||.||+|... ++..||+|.+..... ..+.+.+|++++++++|||++++++++... ...++|||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~-~~~~lv~e 97 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-DELWVVME 97 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-CEEEEeec
Confidence 347899999999999999999764 688999999865333 346788999999999999999999998765 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++... .+++..+..++.|++.|++|||+.||+||||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~~L~~~~~~~------~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~- 170 (296)
T cd06654 98 YLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (296)
T ss_pred ccCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc-
Confidence 99999999998642 36888999999999999999999999999999999999999999999999886432211
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......|++.|+|||.+.+..++.++|||||||++|+|++|+.||............. ... ......+
T Consensus 171 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~---~~~-~~~~~~~----- 239 (296)
T cd06654 171 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNG-TPELQNP----- 239 (296)
T ss_pred --cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHh---cCC-CCCCCCc-----
Confidence 12233468889999999988888999999999999999999999997554322211111 110 0000000
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ... ....+++.+||..||++||++.|++++
T Consensus 240 -~---~~~--~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 240 -E---KLS--AIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -c---ccC--HHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0 000 112378999999999999999999974
No 237
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.2e-33 Score=308.40 Aligned_cols=250 Identities=19% Similarity=0.358 Sum_probs=194.7
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC----------HHHHHHHHHHHhhccCCCeeeEEEEEeCCCC
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----------ENTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 906 (1133)
+|.+.+.||+|+||.||+|... +++.||+|.+...... .+.+.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD- 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-
Confidence 4788899999999999999764 5789999988643221 146788999999999999999999988764
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
..++||||+++++|.+++...+ .+++..+..++.|++.|++|||+.|++||||+|+||+++.++.++++|||.++
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYG-----AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 5589999999999999997643 37888889999999999999999999999999999999999999999999987
Q ss_pred ccccCCCC---CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccc
Q 001171 987 LAIATPAE---ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIS 1063 (1133)
Q Consensus 987 ~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 1063 (1133)
........ ........|+..|+|||.+.+..++.++||||+||++|+|++|+.||...........+.. .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~--- 227 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE----N--- 227 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc----c---
Confidence 65321111 1111234588899999999888899999999999999999999999975443222221111 0
Q ss_pred ccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1064 ELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
..+... .. .. ....+++.+||+.||.+||++.|++++
T Consensus 228 --~~~~~~---~~---~~--~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 228 --ASPEIP---SN---IS--SEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred --CCCcCC---cc---cC--HHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 011110 00 00 112378889999999999999999863
No 238
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.7e-33 Score=314.18 Aligned_cols=260 Identities=22% Similarity=0.338 Sum_probs=200.2
Q ss_pred HHHHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCC----
Q 001171 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAGPP---- 905 (1133)
Q Consensus 832 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~---- 905 (1133)
...+.++|++.+.||+|+||.||+|... +++.+|+|++.........+.+|+.+++++ +|||++++++++...+
T Consensus 17 ~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 17 LGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 3345778999999999999999999774 688999999875544456788999999999 8999999999986432
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
...++||||+++++|.++++.... ....+++..++.++.|++.|++|||+.+|+||||||+||+++.++.++++|||.+
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~ 175 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS 175 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence 346899999999999999875322 2245889999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCC-----CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTG-----QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 1060 (1133)
+...... .......|+..|+|||++... .++.++||||+||++|||++|+.||...........+.+ .
T Consensus 176 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~----~ 248 (291)
T cd06639 176 AQLTSTR---LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR----N 248 (291)
T ss_pred hhccccc---ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc----C
Confidence 6543211 112234688899999997543 368999999999999999999999975544332222111 1
Q ss_pred cccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1061 QISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
......++ ..+. ....+++.+||+.+|++||++.|++++
T Consensus 249 ~~~~~~~~---------~~~~--~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 249 PPPTLLHP---------EKWC--RSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CCCCCCcc---------cccC--HHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11111110 0000 122378999999999999999999864
No 239
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.7e-33 Score=321.15 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=192.5
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+++.+ +++.||+|.+.+.. .....+.+|..++..++|++|+++++++... +..++|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~-~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE-NYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CEEEEE
Confidence 47899999999999999999875 57889999986421 1234578899999999999999999999876 456999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~Ey~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 80 MDYYVGGDLLTLLSKFE----DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred EeCCCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999998632 23788889999999999999999999999999999999999999999999998654322
Q ss_pred CCCCCCCCCCCCCCCccCccccCC-----CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAAST-----GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
.. .......|++.|+|||++.+ +.++.++||||+||++|||++|+.||...+..+....+.....+..+
T Consensus 156 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~---- 229 (331)
T cd05624 156 GT--VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF---- 229 (331)
T ss_pred Cc--eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccC----
Confidence 11 12233569999999999865 46788999999999999999999999765544433332221111111
Q ss_pred cCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCC--CCCHHHHHHH
Q 001171 1067 EPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLD--RPSMADIVFM 1110 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~--RPs~~evl~~ 1110 (1133)
..... ... ....+++.+|+..++.+ |+++++++++
T Consensus 230 p~~~~-------~~~--~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 230 PSHIT-------DVS--EEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCccc-------cCC--HHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11110 000 11226777888765544 5688888765
No 240
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.7e-34 Score=323.83 Aligned_cols=237 Identities=25% Similarity=0.402 Sum_probs=184.9
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHH-HHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAE-ALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++||+|+||+||+|+.+ +|+.||+|++.... .....+.+|.. +++.++||||+++++++...+ ..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~-~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE-KLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC-EEEEEEcCCC
Confidence 46999999999999765 68999999986432 12334555555 467789999999999988764 5599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|..++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..... ..
T Consensus 80 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~---~~ 151 (325)
T cd05604 80 GGELFFHLQRER-----SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ---SD 151 (325)
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---CC
Confidence 999998887532 3789999999999999999999999999999999999999999999999998643211 12
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......|++.|+|||++.+..++.++||||+||++|||++|+.||...+..+....+... .. ...+. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~----~~--~~~~~------~ 219 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK----PL--VLRPG------A 219 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC----Cc--cCCCC------C
Confidence 233457999999999999999999999999999999999999999766555444333221 10 01110 1
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMAD 1106 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~e 1106 (1133)
. ....+++.+|++.||.+||++.+
T Consensus 220 ~------~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 220 S------LTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred C------HHHHHHHHHHhccCHHhcCCCCC
Confidence 1 11236888999999999998863
No 241
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.3e-33 Score=320.17 Aligned_cols=193 Identities=21% Similarity=0.327 Sum_probs=163.0
Q ss_pred HHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 834 EATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 834 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
....+|++.+.||+|+||.||+|... +++.||+|..... ....|+.++++++||||+++++++.... ..++||
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 136 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGA-ITCMVL 136 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCC-eeEEEE
Confidence 44568999999999999999999775 4788999975432 3456999999999999999999998764 458999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+ .++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||.++.....
T Consensus 137 e~~-~~~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 210 (357)
T PHA03209 137 PHY-SSDLYTYLTKRS----RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA- 210 (357)
T ss_pred Ecc-CCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC-
Confidence 999 568888886532 34889999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPV 1041 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf 1041 (1133)
.......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 ---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1223456899999999999989999999999999999999865554
No 242
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.2e-33 Score=310.15 Aligned_cols=238 Identities=22% Similarity=0.350 Sum_probs=182.4
Q ss_pred ccccccceeEEEEEECC-------------------------ceEEEEEEcccCCcC-HHHHHHHHHHHhhccCCCeeeE
Q 001171 844 VLSRGRYGLIFKASYQD-------------------------GMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVL 897 (1133)
Q Consensus 844 ~lg~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l 897 (1133)
.||+|+||.||+|.+.. ...||+|.+...... ...+.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999996421 245888888643322 3567889999999999999999
Q ss_pred EEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC--
Q 001171 898 RGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF-- 975 (1133)
Q Consensus 898 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~-- 975 (1133)
++++.... ..++||||+++|+|..++.... ..+++..+..++.||++||+|||+++|+||||||+||+++..+
T Consensus 82 ~~~~~~~~-~~~lv~ey~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGS-ENIMVEEFVEHGPLDVCLRKEK----GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCC-ceEEEEecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcc
Confidence 99998764 4599999999999999987532 3478999999999999999999999999999999999997643
Q ss_pred -----ceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHH-hCCCCCccCChhh
Q 001171 976 -----EAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEIL-TGRKPVMFTQDED 1048 (1133)
Q Consensus 976 -----~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~-tg~~Pf~~~~~~~ 1048 (1133)
.++++|||.+..... .....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||......+
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~-------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALS-------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred cCccceeeecCCcccccccc-------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 379999998753311 122357788999998865 56799999999999999995 6999997654443
Q ss_pred HHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1049 IVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
........ ...++ +.. ....+++.+||+.+|++||++.+|++.|.
T Consensus 230 ~~~~~~~~---~~~~~----------~~~------~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 KERFYEKK---HRLPE----------PSC------KELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHhc---cCCCC----------CCC------hHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 32222111 00000 000 11237889999999999999999999874
No 243
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-34 Score=320.92 Aligned_cols=242 Identities=21% Similarity=0.373 Sum_probs=202.0
Q ss_pred cccccccccceeEEEEEEC-CceEEEEEEcc-----cCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCC-cEEEEEe
Q 001171 841 EENVLSRGRYGLIFKASYQ-DGMVLSIRRLR-----DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPD-VRLLVYD 913 (1133)
Q Consensus 841 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~-----~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-~~~lV~e 913 (1133)
...+||+|+|-+||+|.+. +|..||--.++ +.....++|..|+++|+.|+|||||+++.++.+... ...+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 4568999999999999664 57777744332 223334789999999999999999999998876543 4468999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCC--ceecccCccceeeCC-CCceEEeccCccccccc
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD--MVHGDIKPQNVLFDA-DFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~ 990 (1133)
.+..|+|..|.++.++ .+......|++||++||.|||++. |+|||||-+||||+. .|.|||+|+|+|.....
T Consensus 124 L~TSGtLr~Y~kk~~~-----vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHRR-----VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cccCCcHHHHHHHhcc-----CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999998765 788899999999999999999874 999999999999976 58999999999976533
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCc-cCChhhHHHHHHHHhhhccccccccCC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM-FTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.. ....+|||.|||||+.. ..|...+||||||++|+||.|+.+||. ......+++.+..+.+...+..+-||.
T Consensus 199 s~-----aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPe 272 (632)
T KOG0584|consen 199 SH-----AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPE 272 (632)
T ss_pred cc-----cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHH
Confidence 22 23368999999999986 789999999999999999999999995 456778888888877776666666655
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+ ++|.+|+.. .++||++.|+++.
T Consensus 273 vr----------------~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 273 VR----------------EFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HH----------------HHHHHHhcC-chhccCHHHHhhC
Confidence 54 688899999 9999999999853
No 244
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.8e-33 Score=339.74 Aligned_cols=253 Identities=18% Similarity=0.285 Sum_probs=193.1
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRL 909 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~ 909 (1133)
..++|++.+.||+|+||+||+|.+. .+..||+|.+..... ....+.+|+.++++++|||||+++++|... ....|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4568999999999999999999775 578899998864332 245788999999999999999999987543 34568
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC-------CceecccCccceeeCC---------
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL-------DMVHGDIKPQNVLFDA--------- 973 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------~ivH~Dlkp~NIll~~--------- 973 (1133)
+||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+. +||||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 999999999999999764321 23489999999999999999999984 4999999999999964
Q ss_pred --------CCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCC--CCCCCCCchhHHHHHHHHHHhCCCCCcc
Q 001171 974 --------DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAST--GQPTKEADVYSFGIVLLEILTGRKPVMF 1043 (1133)
Q Consensus 974 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~tg~~Pf~~ 1043 (1133)
.+.+||+|||+++..... .......||+.|+|||++.+ ..++.++||||||||+|||++|+.||..
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~----s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIE----SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccCCCCceEEccCCcccccccc----ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 234899999998654221 12234579999999999854 4578999999999999999999999965
Q ss_pred CChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1044 TQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
..... .+...+.... ... . .... ....+++.+||+.+|.+||++.|++.
T Consensus 246 ~~~~~---qli~~lk~~p--~lp---i---~~~S------~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 ANNFS---QLISELKRGP--DLP---I---KGKS------KELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcHH---HHHHHHhcCC--CCC---c---CCCC------HHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 43322 1111111110 000 0 0011 11237889999999999999999984
No 245
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.4e-33 Score=309.53 Aligned_cols=252 Identities=24% Similarity=0.440 Sum_probs=195.4
Q ss_pred cccccccceeEEEEEECC-------ceEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 843 NVLSRGRYGLIFKASYQD-------GMVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+.||+|+||.||+|.+.+ ++.+|+|.+.... .....+.+|++++++++||||+++++++.... ..++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE-PQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC-CeEEEEe
Confidence 369999999999997642 3679999886543 23567889999999999999999999987654 4599999
Q ss_pred ccCCCCHHHHHHhhccC--CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC-----ceEEeccCccc
Q 001171 914 YMPNGNLATLLQEASHQ--DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF-----EAHLSEFGLDR 986 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~-----~~kl~Dfg~a~ 986 (1133)
|+++++|.+++...... ....+++..+..++.|++.|++|||+.+++|+||||+||+++.++ .++++|||+++
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 99999999999764321 223478899999999999999999999999999999999999877 89999999986
Q ss_pred ccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcccccc
Q 001171 987 LAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISEL 1065 (1133)
Q Consensus 987 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1133)
....... ........++..|+|||++.++.++.++|||||||++|||++ |+.||......+....+... ..+
T Consensus 160 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~---~~~--- 232 (269)
T cd05044 160 DIYKSDY-YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG---GRL--- 232 (269)
T ss_pred ccccccc-cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC---Ccc---
Confidence 5432211 111223345678999999998899999999999999999998 99999765555444433211 000
Q ss_pred ccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1066 LEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
..... ... ...+++.+||..+|.+||++.++++.|++
T Consensus 233 ------~~~~~---~~~--~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 233 ------QKPEN---CPD--KIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ------CCccc---chH--HHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00000 011 12378999999999999999999999864
No 246
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.1e-33 Score=315.23 Aligned_cols=260 Identities=22% Similarity=0.356 Sum_probs=201.0
Q ss_pred hcCCCcccccccccceeEEEEEEC-Cce----EEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGM----VLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 908 (1133)
.++|+..++||+|+||.||+|.+. +|. .||+|.+...... ...+.+|+.++++++||||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--~~ 83 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP--TI 83 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC--Cc
Confidence 456888899999999999999764 343 5788888643322 34678999999999999999999998754 24
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+++|+||||||+||+++.++.+|++|||+++..
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHK----DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eeeehhcCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 79999999999999987643 23788899999999999999999999999999999999999999999999999754
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
..... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...........+... .... .
T Consensus 160 ~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~--~ 232 (303)
T cd05110 160 EGDEK-EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG----ERLP--Q 232 (303)
T ss_pred cCccc-ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC----CCCC--C
Confidence 32211 111223345678999999988889999999999999999998 99999765544444333221 1000 0
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCC
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPD 1119 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~ 1119 (1133)
+ .... ....+++.+||..+|++||+++|+++.|+.+...+.
T Consensus 233 ~-----~~~~------~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 233 P-----PICT------IDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred C-----CCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 0 0011 112378889999999999999999999998765544
No 247
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.2e-33 Score=306.21 Aligned_cols=238 Identities=23% Similarity=0.376 Sum_probs=187.0
Q ss_pred cccccccceeEEEEEECC-c----------eEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 843 NVLSRGRYGLIFKASYQD-G----------MVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~-g----------~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++||+|+||.||+|.+.+ + ..|++|.+.........+.+|++++++++||||+++++++.. .. .++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~-~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DE-NIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CC-cEEE
Confidence 469999999999998754 2 357888776544436788999999999999999999999877 33 4899
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC-------ceEEeccCc
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF-------EAHLSEFGL 984 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~-------~~kl~Dfg~ 984 (1133)
|||+++|+|.+++..... .+++..+..++.||+.||+|||+++|+||||||+||+++.++ .++++|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN----NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999986432 478899999999999999999999999999999999999887 799999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCccCccccCCC--CCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhcc
Q 001171 985 DRLAIATPAEASSSTTPIGSLGYVSPEAASTG--QPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQ 1061 (1133)
Q Consensus 985 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~ 1061 (1133)
+..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||............. ...
T Consensus 155 a~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~----~~~ 223 (259)
T cd05037 155 PITVLS-------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ----DQH 223 (259)
T ss_pred cccccc-------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh----cCC
Confidence 865422 1223466789999999776 78999999999999999999 577776544322222211 000
Q ss_pred ccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1062 ISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
.... +.. ....+++.+||..+|.+||++.|+++.|+
T Consensus 224 --------~~~~-~~~------~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 224 --------RLPM-PDC------AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --------CCCC-CCc------hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 000 22337899999999999999999999874
No 248
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4.1e-33 Score=305.98 Aligned_cols=247 Identities=24% Similarity=0.411 Sum_probs=197.0
Q ss_pred cCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
++|++.+.||+|+||.||++.. .++.||+|...... ..+.+.+|++++++++|||++++++++... . .++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~-~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-G-LYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-C-cEEEEECCC
Confidence 4689999999999999999975 57889999986533 356789999999999999999999998654 3 489999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+++|.+++..... ..+++..+..++.|++.|++|||+.|++||||||+||+++.++.++++|||.++.....
T Consensus 82 ~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 82 KGNLVNFLRTRGR---ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence 9999999976432 34789999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
......+..|+|||++.+..++.++||||+||++|||++ |+.||......+....+.+. ...+. ...
T Consensus 154 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~----~~~~~-~~~------ 221 (254)
T cd05083 154 -VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG----YRMEP-PEG------ 221 (254)
T ss_pred -CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC----CCCCC-CCc------
Confidence 112234568999999988889999999999999999998 99999765554443332221 10000 000
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
. . ....+++.+||+.+|++||+++++++.|++
T Consensus 222 ~----~--~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 222 C----P--ADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred C----C--HHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0 0 112378999999999999999999999875
No 249
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=6.4e-33 Score=310.37 Aligned_cols=265 Identities=22% Similarity=0.326 Sum_probs=196.5
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
++|++.++||+|+||.||+|..+ +|+.||+|++..... ..+.+.+|++++++++|||++++++++.... ..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR-KLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC-EEEEEE
Confidence 36889999999999999999876 589999999864322 2356789999999999999999999998764 458999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||++++++..+.... ..+++..+..++.|++.||+|||+.+++||||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 80 EYCDHTVLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred eccCccHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 999998888776542 238899999999999999999999999999999999999999999999999987543221
Q ss_pred CCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc--cccccC-
Q 001171 993 AEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI--SELLEP- 1068 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 1068 (1133)
. ......++..|+|||++.+ ..++.++||||+||++|||++|+.||......+....+.+....... .+..+.
T Consensus 155 ~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 155 D---DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred c---cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 1 2223457889999999865 45789999999999999999999999765544433333222111000 000000
Q ss_pred ----Cc-CCCCCCChhHH----HH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1069 ----GL-LELDPESSEWE----EF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1069 ----~~-~~~~~~~~~~~----~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. ..........+ .+ ....+++.+||+.||++||++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00 00000000011 11 122389999999999999999999853
No 250
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4e-33 Score=311.66 Aligned_cols=261 Identities=25% Similarity=0.420 Sum_probs=200.4
Q ss_pred cCCCcccccccccceeEEEEEEC-----CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-----DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVR 908 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~ 908 (1133)
+.|++.+.||+|+||.||+|.+. .++.||+|++...... .+.+.+|++++++++|||++++++++... ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 46778899999999999999753 3789999999765543 56899999999999999999999988652 3456
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
++||||+++++|.+++..... .+++..+..++.|++.||+|||+.|++||||||+||+++.++.++++|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRD----QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCcc----ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 899999999999999976432 4889999999999999999999999999999999999999999999999998765
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhh-----------HHHHHHHHh
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDED-----------IVKWVKKQL 1057 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~-----------~~~~~~~~~ 1057 (1133)
..............++..|+|||...+..++.++|||||||++|||++|+.|+....... ....+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 322211111122345567999999988889999999999999999999999985432211 011111111
Q ss_pred hhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1058 QRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
..... .. .+. ... ....+++.+||+.+|++||++.||+++|+.+
T Consensus 240 ~~~~~-------~~--~~~--~~~--~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 240 KEGER-------LP--RPP--SCP--DEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HcCCc-------CC--CCc--cCC--HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11100 00 000 000 1233789999999999999999999999875
No 251
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.8e-33 Score=305.43 Aligned_cols=239 Identities=23% Similarity=0.377 Sum_probs=182.3
Q ss_pred cccccccceeEEEEEECC-------------ceEEEEEEcccCCcC-HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcE
Q 001171 843 NVLSRGRYGLIFKASYQD-------------GMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 908 (1133)
+.||+|+||.||+|.+.. ...|++|.+.....+ ...+.+|+.+++.++||||+++++++..... .
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~-~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE-N 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC-C
Confidence 468999999999997532 236888887543322 3477889999999999999999999987644 4
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCc-------eEEec
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFE-------AHLSE 981 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~-------~kl~D 981 (1133)
++||||+++|+|..++.... ..+++..+..++.||++|++|||+++|+||||||+||+++.++. ++++|
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred EEEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 89999999999998886532 34788999999999999999999999999999999999987654 89999
Q ss_pred cCcccccccCCCCCCCCCCCCCCCCccCccccC-CCCCCCCCchhHHHHHHHHHH-hCCCCCccCChhhHHHHHHHHhhh
Q 001171 982 FGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS-TGQPTKEADVYSFGIVLLEIL-TGRKPVMFTQDEDIVKWVKKQLQR 1059 (1133)
Q Consensus 982 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~el~-tg~~Pf~~~~~~~~~~~~~~~~~~ 1059 (1133)
||++.... ......++..|+|||.+. +..++.++|||||||++|||+ +|..||......+.... ..
T Consensus 156 ~g~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~-----~~ 223 (262)
T cd05077 156 PGIPITVL-------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF-----YE 223 (262)
T ss_pred CCCCcccc-------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-----Hh
Confidence 99875432 112345778999999986 466899999999999999997 58888865433222111 11
Q ss_pred ccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1060 GQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1060 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
.... . ..+. .+ ...+++.+||+.||++||++.||++.+.
T Consensus 224 ~~~~-~-------~~~~---~~---~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 224 GQCM-L-------VTPS---CK---ELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred cCcc-C-------CCCC---hH---HHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1100 0 0011 11 1237899999999999999999998763
No 252
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.7e-33 Score=323.50 Aligned_cols=262 Identities=21% Similarity=0.302 Sum_probs=196.8
Q ss_pred HHHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCC---
Q 001171 833 LEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPP--- 905 (1133)
Q Consensus 833 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--- 905 (1133)
.+..++|++.+.||+|+||.||+|... +++.||||++..... ..+.+.+|++++++++||||+++++++....
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 345678999999999999999999764 688999999865322 2356778999999999999999998875321
Q ss_pred --CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccC
Q 001171 906 --DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG 983 (1133)
Q Consensus 906 --~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 983 (1133)
...++++|++ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCc
Confidence 3358999988 7899888753 238899999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc
Q 001171 984 LDRLAIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI 1062 (1133)
Q Consensus 984 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 1062 (1133)
+++.... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...+..+....+.+......
T Consensus 164 ~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~- 236 (343)
T cd07878 164 LARQADD------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPS- 236 (343)
T ss_pred cceecCC------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC-
Confidence 9875321 1234568999999999876 5688999999999999999999999976554443333322211110
Q ss_pred ccccc-----------CCcCCCCCCChhHHHH-----HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1063 SELLE-----------PGLLELDPESSEWEEF-----LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1063 ~~~~~-----------~~~~~~~~~~~~~~~~-----~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+... ........ ...... ....+++.+|++.||.+|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 237 PEVLKKISSEHARKYIQSLPHMPQ--QDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHHhcchhhHHHHhhccccccc--hhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 00000000 000000 112489999999999999999999966
No 253
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5e-33 Score=305.71 Aligned_cols=250 Identities=24% Similarity=0.357 Sum_probs=198.7
Q ss_pred cCCCcccccccccceeEEEEEECC-ceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
++|++.++||+|+||.||+|.++. +..|++|.+..... .+.+.+|++++++++|||++++++++... ...++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKN-TDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecC-CcEEEEEecC
Confidence 578999999999999999998865 78999999875433 67899999999999999999999999876 4559999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++.... ..+++..+..++.|++.|+.|||+.+|+||||+|+||+++.++.++++|||++.......
T Consensus 81 ~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--- 153 (256)
T cd06612 81 GAGSVSDIMKITN----KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--- 153 (256)
T ss_pred CCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc---
Confidence 9999999987533 348999999999999999999999999999999999999999999999999986543221
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||...........+.. .. .+...
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~----~~-----~~~~~---- 220 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN----KP-----PPTLS---- 220 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc----CC-----CCCCC----
Confidence 122334578899999999888899999999999999999999999975443322111100 00 00000
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
...... ....+++.+||+.||++||++.|++++
T Consensus 221 ~~~~~~--~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 221 DPEKWS--PEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred chhhcC--HHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 000011 112378999999999999999999863
No 254
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.8e-33 Score=306.23 Aligned_cols=247 Identities=23% Similarity=0.367 Sum_probs=194.2
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc------CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI------DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
+|+..++||+|+||.||+|... +++.|++|.+..... ..+.+.+|++++++++|||++++++++.... ..++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED-NLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC-eEEE
Confidence 4778899999999999999776 789999999864331 2357889999999999999999999987764 4599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++++|.+++.... .+++..+..++.|++.|++|||+.||+|+||+|+||+++.++.+||+|||.+.....
T Consensus 80 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 80 FLELVPGGSLAKLLKKYG-----SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEEecCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 999999999999997642 378889999999999999999999999999999999999999999999999865422
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCC-CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.. ......|+..|+|||.+.... ++.++|+||+||++|+|++|+.||...........+.+ ...... +.+.
T Consensus 155 ~~----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~-~~~~ 226 (258)
T cd06632 155 FS----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGR---SKELPP-IPDH 226 (258)
T ss_pred cc----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHh---cccCCC-cCCC
Confidence 21 223456888999999987766 89999999999999999999999965443222211111 111111 1100
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. . ....+++.+||+.+|.+||++.+++++
T Consensus 227 ~----------~--~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 227 L----------S--DEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred c----------C--HHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 0 0 112368889999999999999999863
No 255
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=9.2e-33 Score=302.66 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=194.4
Q ss_pred cccccccceeEEEEEECCceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCH
Q 001171 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNL 920 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL 920 (1133)
++||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.... ..++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ-PIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-CeEEEEEcCCCCcH
Confidence 46999999999999887799999999875443 2457889999999999999999999988764 45999999999999
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCC
Q 001171 921 ATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTT 1000 (1133)
Q Consensus 921 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 1000 (1133)
.+++.... ..+++..+..++.+++.|++|||+++++||||||+||+++.++.++++|||.++...... .......
T Consensus 80 ~~~l~~~~----~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~ 154 (251)
T cd05041 80 LTFLRKKK----NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI-YTVSDGL 154 (251)
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCc-ceecccc
Confidence 99997532 237888899999999999999999999999999999999999999999999986442111 1111112
Q ss_pred CCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1001 PIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1001 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
..++..|+|||++.++.++.++|+||+||++|||++ |..||...........+..... . ..+ ..
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~---~---~~~-------~~-- 219 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYR---M---PAP-------QL-- 219 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCC---C---CCC-------cc--
Confidence 234567999999988889999999999999999999 8888876555444333322110 0 000 00
Q ss_pred HHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.. ....+++.+|+..+|.+||++.|+++.|+.
T Consensus 220 ~~--~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 220 CP--EEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CC--HHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 00 122378999999999999999999999863
No 256
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.3e-33 Score=313.22 Aligned_cols=266 Identities=20% Similarity=0.298 Sum_probs=197.1
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.++|++.+.||+|+||.||+|..+ +++.||+|.+..... ....+.+|++++++++||||+++++++... ...++||
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~-~~~~lv~ 83 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-KSLTLVF 83 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC-CeEEEEE
Confidence 357899999999999999999775 578999999864322 235677899999999999999999999876 4569999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||++ ++|.+++.... ..+++..+..++.||++||+|||+.+|+||||||+||+++.++.++++|||++......
T Consensus 84 e~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~- 157 (301)
T cd07873 84 EYLD-KDLKQYLDDCG----NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP- 157 (301)
T ss_pred eccc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC-
Confidence 9996 68998887643 23788899999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc---ccccccC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ---ISELLEP 1068 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 1068 (1133)
........+++.|+|||++.+. .++.++||||+||++|||++|+.||...+..+....+........ .......
T Consensus 158 --~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 158 --TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred --CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcc
Confidence 1112234578899999998654 478899999999999999999999976665544443333221110 0111000
Q ss_pred C-cCC--CCCCChhH-----HHHH-HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1069 G-LLE--LDPESSEW-----EEFL-LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1069 ~-~~~--~~~~~~~~-----~~~~-~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ... .+....+. .... ...+++.+|++.||.+|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 000 00000000 0001 12379999999999999999999973
No 257
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=9.3e-33 Score=306.75 Aligned_cols=258 Identities=20% Similarity=0.362 Sum_probs=198.1
Q ss_pred CCcccccccccceeEEEEEEC----CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCC-----C
Q 001171 839 FDEENVLSRGRYGLIFKASYQ----DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPP-----D 906 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~ 906 (1133)
|.+.++||+|+||.||+|.++ .++.||||++...... .+++.+|++++++++|||++++++++.... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999753 3689999998654322 456889999999999999999999886432 2
Q ss_pred cEEEEEeccCCCCHHHHHHhhccC-CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQ-DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
..++++||+++|+|.+++...... ....+++.....++.||+.|++|||+.+|+||||||+||+++.++.+|++|||.+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 337899999999999888643321 1234788889999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
+....... ........++..|++||.+....++.++|||||||++|||++ |+.||......+...++.+.. ...
T Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~- 235 (273)
T cd05074 161 KKIYSGDY-YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN---RLK- 235 (273)
T ss_pred ccccCCcc-eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC---cCC-
Confidence 75432211 111223345678999999988889999999999999999999 889987655544444333210 000
Q ss_pred cccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1065 LLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
.... ......+++.+|++.+|++||++.|+++.|+++
T Consensus 236 --------~~~~-----~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 --------QPPD-----CLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred --------CCCC-----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 011233789999999999999999999999875
No 258
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7e-33 Score=302.38 Aligned_cols=252 Identities=21% Similarity=0.359 Sum_probs=194.6
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcC---HHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---ENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV 911 (1133)
...|++.+.||+|+.+.||++...+.+.||+|++.....+ ...|..|++.|.+++ |.+||++++|-.. +++.|+|
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-DGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-CceEEEE
Confidence 3468899999999999999999888899999998654443 467899999999995 9999999998766 4677999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||- ..+|..+++..... ...| .++.++.|++.|+.+.|.+||||.||||.|+|+ -.|.+||+|||.|..+...
T Consensus 439 mE~G-d~DL~kiL~k~~~~---~~~~-~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSI---DPDW-FLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPD 512 (677)
T ss_pred eecc-cccHHHHHHhccCC---CchH-HHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCcc
Confidence 9986 67999999876542 1334 778899999999999999999999999999998 4679999999999765332
Q ss_pred CCCCCCCCCCCCCCCccCccccCCC-----------CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTG-----------QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 1060 (1133)
.........+||+.||+||.+... +.++++||||+|||+|+|+.|+.||... ...+..+..
T Consensus 513 -TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~--~n~~aKl~a----- 584 (677)
T KOG0596|consen 513 -TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI--INQIAKLHA----- 584 (677)
T ss_pred -ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH--HHHHHHHHh-----
Confidence 222334567899999999998432 2568999999999999999999999521 112222222
Q ss_pred cccccccCCc-CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1061 QISELLEPGL-LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1061 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+.+++. .+++.....++ +++++..|++.||.+||++.|++++
T Consensus 585 ----I~~P~~~Iefp~~~~~~~----li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 585 ----ITDPNHEIEFPDIPENDE----LIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ----hcCCCccccccCCCCchH----HHHHHHHHHhcCcccCCCcHHHhcC
Confidence 223321 12222222233 4588999999999999999999853
No 259
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1e-32 Score=305.70 Aligned_cols=254 Identities=19% Similarity=0.323 Sum_probs=196.6
Q ss_pred CCCcccccccccceeEEEEEECC--ceEEEEEEcccCC-----------cCHHHHHHHHHHHhh-ccCCCeeeEEEEEeC
Q 001171 838 QFDEENVLSRGRYGLIFKASYQD--GMVLSIRRLRDGT-----------IDENTFRKEAEALGK-VKHRNLTVLRGYYAG 903 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~-----------~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~ 903 (1133)
.|++.+.||+|+||.||+|.++. ++.+|+|.+.... .....+.+|++++.+ ++|||++++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999998764 6889999875321 112456678888865 799999999999987
Q ss_pred CCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEecc
Q 001171 904 PPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEF 982 (1133)
Q Consensus 904 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Df 982 (1133)
. ...++||||+++++|.+++...... ...+++..++.++.|++.|+.|||+ .+++||||||+||+++.++.++++||
T Consensus 81 ~-~~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 N-DRLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred C-CeEEEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecc
Confidence 6 4559999999999999998653322 2458889999999999999999996 78999999999999999999999999
Q ss_pred CcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc
Q 001171 983 GLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI 1062 (1133)
Q Consensus 983 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 1062 (1133)
|.+....... ......|+..|+|||++.+..++.++||||||+++|||++|+.||...........+... ..
T Consensus 159 g~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~----~~ 230 (269)
T cd08528 159 GLAKQKQPES----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEA----VY 230 (269)
T ss_pred cceeeccccc----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhc----cC
Confidence 9986543221 233456888999999999888999999999999999999999999755444333332221 11
Q ss_pred cccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1063 SELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
...... ... ....+++.+||+.||++||++.|+.++++.
T Consensus 231 ~~~~~~----------~~~--~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 231 EPLPEG----------MYS--EDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred CcCCcc----------cCC--HHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 100000 000 112378889999999999999999998863
No 260
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=6.8e-33 Score=307.97 Aligned_cols=248 Identities=21% Similarity=0.347 Sum_probs=198.2
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|++.+.||.|+||.||+|... +++.||+|.+.... .....+.+|++++++++|||++++++++.+. ...++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-SKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-CeEEEEEE
Confidence 36888899999999999999775 58999999986543 2245788999999999999999999998776 55699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++... .+++..+..++.|++.|+.|||+++++||||+|+||++++++.++++|||.++......
T Consensus 80 ~~~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 152 (274)
T cd06609 80 YCGGGSCLDLLKPG------KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM- 152 (274)
T ss_pred eeCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence 99999999998753 47899999999999999999999999999999999999999999999999987653321
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||...+.......+.. ...+...+..
T Consensus 153 --~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~----~~~~~~~~~~---- 222 (274)
T cd06609 153 --SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK----NNPPSLEGNK---- 222 (274)
T ss_pred --cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhh----cCCCCCcccc----
Confidence 222345688899999999888899999999999999999999999965443332222211 1111111100
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... ...+++.+|+..||++||++++++++
T Consensus 223 ------~~~--~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 223 ------FSK--PFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ------cCH--HHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 000 12378889999999999999999864
No 261
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1e-32 Score=304.79 Aligned_cols=252 Identities=24% Similarity=0.411 Sum_probs=195.0
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.+.||+|+||.||+|... +++.|++|.+..... ..+.+.+|++++++++|+||+++++++... +..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR-EKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC-CEEEEEEe
Confidence 5888999999999999999764 689999999875544 356788999999999999999999998765 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++.... .+++..+..++.+++.|++|||+.||+|+||+|+||++++++.+||+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 80 YCSGGTLEELLEHGR-----ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred cCCCCcHHHHHhhcC-----CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 999999999997632 367888999999999999999999999999999999999999999999999875533222
Q ss_pred CCCC-CCCCCCCCCccCccccCCCC---CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 994 EASS-STTPIGSLGYVSPEAASTGQ---PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 994 ~~~~-~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.... .....++..|+|||++.+.. ++.++||||||+++||+++|+.||...+.......... ......
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~----- 226 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG---AGHKPP----- 226 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh---cCCCCC-----
Confidence 1111 22356788999999997766 78999999999999999999999965432221111111 111000
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
. +.... . .....+++.+|++.+|.+||++.|++.
T Consensus 227 ~---~~~~~-~--~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 227 I---PDSLQ-L--SPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred C---Ccccc-c--CHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 00000 0 011237889999999999999999875
No 262
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.3e-33 Score=309.11 Aligned_cols=250 Identities=20% Similarity=0.317 Sum_probs=193.6
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
|++.+.||+|+||.||+|... ++..+++|.+..... ..+.+.+|+++++.++|||++++++++... ...++||||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC-CEEEEEEEecC
Confidence 677889999999999999775 478889998864332 245688899999999999999999998776 45599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+++|..++.+.. ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.++++|||++...... ..
T Consensus 86 ~~~l~~~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~---~~ 158 (282)
T cd06643 86 GGAVDAVMLELE----RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT---IQ 158 (282)
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc---cc
Confidence 999999886532 34889999999999999999999999999999999999999999999999998643221 11
Q ss_pred CCCCCCCCCCccCccccC-----CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 997 SSTTPIGSLGYVSPEAAS-----TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
......++..|+|||++. +..++.++||||+||++|||++|+.||......+........ .......+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~--- 231 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS----EPPTLAQP--- 231 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhc----CCCCCCCc---
Confidence 223456889999999973 445788999999999999999999999755443322222111 00010000
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
..+. ....+++.+||+.||.+||++.+++++-
T Consensus 232 ------~~~~--~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 232 ------SRWS--SEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred ------cccC--HHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 0011 1123788999999999999999998654
No 263
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=8.9e-33 Score=315.02 Aligned_cols=202 Identities=20% Similarity=0.269 Sum_probs=163.6
Q ss_pred cccccccc--cceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 841 EENVLSRG--RYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 841 ~~~~lg~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
+.++||+| +|++||++..+ +|+.||+|++...... .+.+.+|+++++.++||||+++++++.... ..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-ELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC-EEEEEEec
Confidence 45789999 78899999764 6899999998654322 346778999999999999999999998764 55999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+++|+|.+++..... ..+++..+..++.|++.||+|||+++|+||||||+||+++.++.++++||+.+.........
T Consensus 81 ~~~~~l~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 81 MAYGSAKDLICTHFM---DGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred cCCCcHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 999999999975432 23789999999999999999999999999999999999999999999999865332211110
Q ss_pred ----CCCCCCCCCCCCccCccccCC--CCCCCCCchhHHHHHHHHHHhCCCCCccCCh
Q 001171 995 ----ASSSTTPIGSLGYVSPEAAST--GQPTKEADVYSFGIVLLEILTGRKPVMFTQD 1046 (1133)
Q Consensus 995 ----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~ 1046 (1133)
........++..|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 215 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 215 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 011122356778999999875 4588999999999999999999999975443
No 264
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.2e-32 Score=302.73 Aligned_cols=250 Identities=19% Similarity=0.289 Sum_probs=199.2
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|+..++||+|+||.||.++.. +++.+++|++.... ...+.+.+|++++++++|+||+++++++.+. ...++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD-NTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-CeEEEEEE
Confidence 4888999999999999999764 58899999876432 2245688999999999999999999999876 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++.... ...+++..+..++.|+++|++|||+.+++||||||+||+++.++.+|++|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~- 155 (256)
T cd08221 80 YANGGTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY- 155 (256)
T ss_pred ecCCCcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc-
Confidence 999999999998643 2347889999999999999999999999999999999999999999999999986543222
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......+++.|+|||+..+..++.++||||+|+++|||++|..||......+....+.. +......
T Consensus 156 --~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~----~~~~~~~------- 222 (256)
T cd08221 156 --SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ----GNYTPVV------- 222 (256)
T ss_pred --ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc----CCCCCCc-------
Confidence 122345688999999999888889999999999999999999999976554443333221 1111110
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.... ....+++.+||+.+|++||++.|+++++
T Consensus 223 ----~~~~--~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 223 ----SVYS--SELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ----cccC--HHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0000 1122788899999999999999998763
No 265
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=8.2e-33 Score=314.13 Aligned_cols=254 Identities=24% Similarity=0.356 Sum_probs=197.4
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+|... +++.||+|.+...... .+.+.+|++++++++||||+++++++... ...++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE-TYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC-CEEEEE
Confidence 36888999999999999999776 4899999999754332 35688899999999999999999998775 456999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++++|.+++.... ...+++..+..++.|+++||+|||+.|++||||||+||+++.++.++++|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 80 MDYCPGGELFRLLQRQP---GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EEecCCCCHHHHHHhCC---CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 99999999999987532 245889999999999999999999999999999999999999999999999998644221
Q ss_pred CCCC--------------------------CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCC
Q 001171 992 PAEA--------------------------SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQ 1045 (1133)
Q Consensus 992 ~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~ 1045 (1133)
.... .......|+..|+|||++.+..++.++||||||+++|+|++|+.||...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 1100 01123468889999999998889999999999999999999999997665
Q ss_pred hhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCC----HHHHHHH
Q 001171 1046 DEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS----MADIVFM 1110 (1133)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs----~~evl~~ 1110 (1133)
.......+... ... .. .... .-....+++.+|++.||++||+ ++|++.+
T Consensus 237 ~~~~~~~~~~~--~~~--------~~---~~~~---~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 237 RDETFSNILKK--EVT--------FP---GSPP---VSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred hHHHHHHHhcC--Ccc--------CC---Cccc---cCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 54433222210 000 00 0000 0011237889999999999999 6666653
No 266
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3e-32 Score=301.58 Aligned_cols=253 Identities=18% Similarity=0.356 Sum_probs=185.2
Q ss_pred ccccccceeEEEEEECCc---eEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCC
Q 001171 844 VLSRGRYGLIFKASYQDG---MVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNG 918 (1133)
Q Consensus 844 ~lg~G~~g~Vy~~~~~~g---~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~g 918 (1133)
.||+|+||.||+|...++ ..+++|.+..... ..+.+.+|+.+++.++||||+++++++.... ..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI-PYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC-ccEEEEecCCCC
Confidence 599999999999965433 3566776654322 2467899999999999999999999998764 459999999999
Q ss_pred CHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCC
Q 001171 919 NLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSS 998 (1133)
Q Consensus 919 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 998 (1133)
+|.+++++.... ....++.....++.||+.||+|||+.+|+||||||+||+++.++.++++|||++...... ......
T Consensus 81 ~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~-~~~~~~ 158 (268)
T cd05086 81 DLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE-DYIETE 158 (268)
T ss_pred cHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc-hhhhcc
Confidence 999999864322 233566777889999999999999999999999999999999999999999987532111 111122
Q ss_pred CCCCCCCCccCccccCC-------CCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 999 TTPIGSLGYVSPEAAST-------GQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 999 ~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
....++..|+|||++.. ..++.++|||||||++|||++ |..||......+....+.+... ....++..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~ 234 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQ----VKLFKPQL 234 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcc----cccCCCcc
Confidence 34567889999999743 235789999999999999997 5778865555444443332211 12222222
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
... .... ..+++..|| .+|++||+++||++.|.
T Consensus 235 ~~~--~~~~------~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 235 ELP--YSER------WYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCC--CcHH------HHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 110 1111 125677799 67999999999998874
No 267
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=285.26 Aligned_cols=250 Identities=22% Similarity=0.359 Sum_probs=198.3
Q ss_pred cccccccceeEEEE-EECCceEEEEEEcccC-CcCHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEEEeccCCCC
Q 001171 843 NVLSRGRYGLIFKA-SYQDGMVLSIRRLRDG-TIDENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLVYDYMPNGN 919 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~-~~~~g~~vavK~~~~~-~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV~e~~~~gs 919 (1133)
++||+|+|+.|--+ ...+|..||||++.+. .....++.+|++++.+.+ |+||+++++||+++.. .|+|||-|.||+
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~-FYLVfEKm~GGp 162 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR-FYLVFEKMRGGP 162 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce-EEEEEecccCch
Confidence 67999999999888 4578999999999643 334678899999999985 9999999999988755 499999999999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCc---eEEeccCcccccccCC----
Q 001171 920 LATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDRLAIATP---- 992 (1133)
Q Consensus 920 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~~~~~~~---- 992 (1133)
|..++++.+. +++.++.++.++||.||+|||.+||.|||+||+|||-....+ +|||||.++.-.....
T Consensus 163 lLshI~~~~~-----F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 163 LLSHIQKRKH-----FNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred HHHHHHHhhh-----ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence 9999998655 788899999999999999999999999999999999976544 6999998874322221
Q ss_pred CCCCCCCCCCCCCCccCccccC-----CCCCCCCCchhHHHHHHHHHHhCCCCCccCChh-----------hHHHHHHHH
Q 001171 993 AEASSSTTPIGSLGYVSPEAAS-----TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE-----------DIVKWVKKQ 1056 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~-----------~~~~~~~~~ 1056 (1133)
.......+++|+..|||||+.. ...|++++|.||+|||+|-|++|.+||.+.-+. .-...+-..
T Consensus 238 astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFes 317 (463)
T KOG0607|consen 238 ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFES 317 (463)
T ss_pred CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHH
Confidence 1122345678999999999863 345899999999999999999999999643221 222333333
Q ss_pred hhhccccccccCCcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHH
Q 001171 1057 LQRGQISELLEPGLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
++++. +.+...+|..+...+ +++...+..|+.+|-++.+++.
T Consensus 318 IQEGk-----------YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 318 IQEGK-----------YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HhccC-----------CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 33331 223345677777666 8999999999999999999986
No 268
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.8e-33 Score=309.81 Aligned_cols=249 Identities=20% Similarity=0.330 Sum_probs=197.0
Q ss_pred cCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 837 RQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
.+|++.+.||.|+||.||+|.. .+|+.||+|.+..... ..+.+.+|+++++.++|||++++++++... +..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVG-DELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecC-ceEEEEEEe
Confidence 4689999999999999999976 4689999999864332 356788999999999999999999999775 455999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+++++|.+++... .+++..+..++.+++.|++|||+.|++||||||+||+++.++.++++|||++.......
T Consensus 98 ~~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 169 (296)
T cd06655 98 LAGGSLTDVVTET------CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ-- 169 (296)
T ss_pred cCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc--
Confidence 9999999988642 37899999999999999999999999999999999999999999999999886432211
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+.. ........+
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~----~~~~~~~~~------ 238 (296)
T cd06655 170 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT----NGTPELQNP------ 238 (296)
T ss_pred -ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----cCCcccCCc------
Confidence 112334688899999999888899999999999999999999999976554332222211 111110000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... .. ...+++.+||..||++||++.+++++
T Consensus 239 ~~~---~~--~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 239 EKL---SP--IFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred ccC---CH--HHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000 00 12268899999999999999999853
No 269
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.3e-33 Score=307.46 Aligned_cols=239 Identities=23% Similarity=0.395 Sum_probs=182.7
Q ss_pred cccccccceeEEEEEECC--------ceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 843 NVLSRGRYGLIFKASYQD--------GMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+.||+|+||.||+|..+. ...||+|.+..... ..+.+.+|+.+++.++|||++++++++..... .++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~-~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDE-SIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCC-cEEEEe
Confidence 469999999999997642 23478888754332 23578889999999999999999999987644 489999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCc--------eEEeccCcc
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFE--------AHLSEFGLD 985 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~--------~kl~Dfg~a 985 (1133)
|+++|+|.++++..+. .+++..+..++.||+.|++|||++||+||||||+||+++.++. ++++|||.+
T Consensus 80 ~~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 80 YVKFGSLDTYLKKNKN----LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred cCCCCcHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccc
Confidence 9999999999986432 4788999999999999999999999999999999999987765 589999987
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCC-CCCccCChhhHHHHHHHHhhhcccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGR-KPVMFTQDEDIVKWVKKQLQRGQIS 1063 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~-~Pf~~~~~~~~~~~~~~~~~~~~~~ 1063 (1133)
..... .....++..|+|||++.+. .++.++|||||||++|||++|. .||...+.......... ...
T Consensus 156 ~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~---~~~-- 223 (258)
T cd05078 156 ITVLP-------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED---RHQ-- 223 (258)
T ss_pred cccCC-------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc---ccc--
Confidence 54321 1234578899999999764 5789999999999999999985 56544333322211110 100
Q ss_pred ccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1064 ELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
. +.. .+. ...+++.+||+.||++||+++|+++.|+
T Consensus 224 -~--------~~~--~~~---~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 224 -L--------PAP--KWT---ELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -C--------CCC--CcH---HHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 000 011 1237899999999999999999999874
No 270
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9e-33 Score=308.65 Aligned_cols=254 Identities=22% Similarity=0.376 Sum_probs=198.6
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|++.+.||+|+||+||+|... +|+.||+|++..... ..+.+.+|+++++.++||||+++++++... ...++|||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e 83 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-NNICMCME 83 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-CEEEEEEe
Confidence 56888999999999999999765 588999998764332 246788999999999999999999999876 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|+++++|.+++...+ .+++.....++.+++.|+.|||+ .+++||||||+||+++.++.++++|||++......
T Consensus 84 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 84 FMDCGSLDRIYKKGG-----PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred cCCCCCHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 999999999987632 37899999999999999999997 68999999999999999999999999987543211
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChh--------hHHHHHHHHhhhccccc
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE--------DIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~--------~~~~~~~~~~~~~~~~~ 1064 (1133)
......|+..|+|||++.+..++.++|||||||++|++++|+.||...... .....+.......
T Consensus 158 ----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 229 (284)
T cd06620 158 ----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP---- 229 (284)
T ss_pred ----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc----
Confidence 122356889999999998888999999999999999999999999754332 1112221111110
Q ss_pred cccCCcCCCCCCChhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1065 LLEPGLLELDPESSEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
.+.. .. ..+ ....+++.+|++.||++||++.|++++..-.+
T Consensus 230 --~~~~---~~-----~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 230 --PPRL---PS-----SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred --CCCC---Cc-----hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 0000 00 001 12237899999999999999999998754433
No 271
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.9e-33 Score=320.94 Aligned_cols=239 Identities=21% Similarity=0.319 Sum_probs=182.6
Q ss_pred cccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhc---cCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKV---KHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
||+|+||+||+|+.. +++.||+|++..... ....+..|..++.+. +||||+.+++++.... ..++||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~-~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS-DLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC-eEEEEEcCCC
Confidence 799999999999775 589999999864221 123345567777665 6999999999988764 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+|+|.+++...+ .+++..+..++.||++||+|||++||+||||||+||+++.++.++|+|||+++..... ..
T Consensus 80 ~g~L~~~l~~~~-----~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~---~~ 151 (330)
T cd05586 80 GGELFWHLQKEG-----RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD---NK 151 (330)
T ss_pred CChHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---CC
Confidence 999999987633 3788999999999999999999999999999999999999999999999998643221 12
Q ss_pred CCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
......||+.|+|||++.+. .++.++||||+||++|||++|+.||......+....+... ...+ +.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~-----------~~ 218 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG--KVRF-----------PK 218 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC--CCCC-----------CC
Confidence 23345799999999998654 4799999999999999999999999766554443332211 0000 00
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCC----CHHHHHH
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRP----SMADIVF 1109 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RP----s~~evl~ 1109 (1133)
.. ... ...+++.+|++.||.+|| ++.|+++
T Consensus 219 ~~--~~~--~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 NV--LSD--EGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred cc--CCH--HHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 00 000 112688899999999998 5666655
No 272
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.6e-32 Score=302.04 Aligned_cols=250 Identities=26% Similarity=0.448 Sum_probs=198.2
Q ss_pred CCcccccccccceeEEEEEECC-----ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 839 FDEENVLSRGRYGLIFKASYQD-----GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
+++.+.||+|+||.||++.+.. +..||+|++..... ..+.+.+|++++++++||||+++++++... ...+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-EPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-CeeEEE
Confidence 3567899999999999997753 48899999976544 356889999999999999999999999876 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++++|.+++..... ..+++..+..++.|++.|++|||+.+++||||||+||+++.++.++++|||+++.....
T Consensus 80 ~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred EeccCCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 999999999999986432 12789999999999999999999999999999999999999999999999998755332
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
.. .......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||...........+.... .....
T Consensus 157 ~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~----~~~~~---- 226 (258)
T smart00219 157 DY--YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY----RLPKP---- 226 (258)
T ss_pred cc--cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC----CCCCC----
Confidence 11 11112336789999999988889999999999999999998 888887655555544443321 11000
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.. .. ....+++.+|+..||++||++.|+++.|
T Consensus 227 ----~~---~~--~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 ----EN---CP--PEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----Cc---CC--HHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 00 00 1123688899999999999999998764
No 273
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.4e-33 Score=306.46 Aligned_cols=253 Identities=21% Similarity=0.343 Sum_probs=194.4
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
.++|++.+.||+|+||.||+|... +++.||+|.++.... ....+.+|+.+++.++||||+++++++... +..++|||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~-~~~~lv~e 86 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR-DKLWICME 86 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-CEEEEEEe
Confidence 347888899999999999999764 588999999865432 235678899999999999999999998776 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++...+ .+++..+..++.|++.|++|||+.||+|+||||+||+++.++.++++|||++......
T Consensus 87 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-- 159 (267)
T cd06645 87 FCGGGSLQDIYHVTG-----PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-- 159 (267)
T ss_pred ccCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc--
Confidence 999999999987643 3789999999999999999999999999999999999999999999999998654221
Q ss_pred CCCCCCCCCCCCCccCccccC---CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 994 EASSSTTPIGSLGYVSPEAAS---TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
........|+..|+|||++. ...++.++||||+||++|||++|+.||.............. .... .+..
T Consensus 160 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~----~~~~---~~~~ 231 (267)
T cd06645 160 -IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK----SNFQ---PPKL 231 (267)
T ss_pred -ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc----cCCC---CCcc
Confidence 11223456899999999974 45578999999999999999999999864433221111111 1100 0101
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... ..+.. ...+++.+|++.+|++||++++++++
T Consensus 232 ~~~----~~~~~--~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 232 KDK----MKWSN--SFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred ccc----CCCCH--HHHHHHHHHccCCchhCcCHHHHhcC
Confidence 000 00111 12378899999999999999999864
No 274
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.4e-32 Score=308.50 Aligned_cols=252 Identities=21% Similarity=0.360 Sum_probs=194.2
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
.+.|++.++||+|+||.||+|... +++.|++|.+..... ..+.+.+|++++++++|||++++++++... ...++|||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e 89 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD-GKLWIMIE 89 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC-CeEEEEEe
Confidence 357899999999999999999875 488999999865432 245688899999999999999999998765 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|..++.... ..+++..+..++.|++.|++|||+.+|+||||||+||+++.++.++|+|||.+......
T Consensus 90 ~~~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-- 163 (292)
T cd06644 90 FCPGGAVDAIMLELD----RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-- 163 (292)
T ss_pred cCCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc--
Confidence 999999998876532 23789999999999999999999999999999999999999999999999987643221
Q ss_pred CCCCCCCCCCCCCccCccccC-----CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 994 EASSSTTPIGSLGYVSPEAAS-----TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
........++..|+|||++. ...++.++|||||||++|||++|+.||...........+ . ....+....+
T Consensus 164 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~---~-~~~~~~~~~~ 238 (292)
T cd06644 164 -LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI---A-KSEPPTLSQP 238 (292)
T ss_pred -ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH---h-cCCCccCCCC
Confidence 11223346788999999984 344678999999999999999999999654433222111 1 1111110000
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
..+. ....+++.+||+.||++||++.|++++
T Consensus 239 ---------~~~~--~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 239 ---------SKWS--MEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ---------cccC--HHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 112378899999999999999999864
No 275
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.3e-32 Score=307.71 Aligned_cols=266 Identities=20% Similarity=0.309 Sum_probs=193.5
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.+.||+|++|.||+|..+ +++.||+|++..... ..+.+.+|++++++++|||++++++++..+ ...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE-SRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-CeEEEEEe
Confidence 4788899999999999999875 689999999864322 235788999999999999999999999875 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|++ ++|.+++..... ...+++..+..++.||+.||+|||+.+|+||||||+||+++.++.++|+|||++......
T Consensus 80 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 154 (285)
T cd07861 80 FLS-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP-- 154 (285)
T ss_pred cCC-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC--
Confidence 996 689888875332 245889999999999999999999999999999999999999999999999998643221
Q ss_pred CCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc------ccccc
Q 001171 994 EASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ------ISELL 1066 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~------~~~~~ 1066 (1133)
........+++.|+|||++.+. .++.++||||+||++|||++|+.||......+......+...... .....
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 155 -VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred -cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhH
Confidence 1122234578899999988654 468899999999999999999999975443322222111111000 00000
Q ss_pred --cCCcCCCCCCC--hhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1067 --EPGLLELDPES--SEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1067 --~~~~~~~~~~~--~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
........... .....+ ....+++.+|++.||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000000000 000000 112379999999999999999999864
No 276
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7.4e-33 Score=308.74 Aligned_cols=252 Identities=23% Similarity=0.368 Sum_probs=196.3
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
.++|++.+.||+|+||.||+|.++ ++..||+|.+..... ..+.+.+|++++++++|||++++++++... ...++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE-NKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC-CeEEEEee
Confidence 456899999999999999999875 588999999864332 245788999999999999999999999875 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++.... ..+++..+..++.|++.|+.|||+.+|+||||||+||+++.++.++++|||.+......
T Consensus 83 ~~~~~~L~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~-- 156 (280)
T cd06611 83 FCDGGALDSIMLELE----RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST-- 156 (280)
T ss_pred ccCCCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc--
Confidence 999999999987643 34889999999999999999999999999999999999999999999999987543221
Q ss_pred CCCCCCCCCCCCCccCccccC-----CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 994 EASSSTTPIGSLGYVSPEAAS-----TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
........++..|+|||++. +..++.++||||+||++|||++|+.||...+.......+. ....+....+
T Consensus 157 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~ 231 (280)
T cd06611 157 -LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL----KSEPPTLDQP 231 (280)
T ss_pred -ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHh----cCCCCCcCCc
Confidence 11223456888999999974 3446789999999999999999999997654433222221 1111110000
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. .+. ....+++.+||+.+|.+||++.+++++
T Consensus 232 ~---------~~~--~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 232 S---------KWS--SSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred c---------cCC--HHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0 000 112378889999999999999999875
No 277
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.3e-32 Score=308.42 Aligned_cols=244 Identities=23% Similarity=0.350 Sum_probs=195.6
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++|++.+.||+|+||.||+|.+. +++.||+|.+.... ...+.+.+|++++++++||||+++++++.... ..++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS-NLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-eEEEE
Confidence 36889999999999999999775 58999999986432 12456888999999999999999999998764 45999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++++|.+++... ..+++..+..++.|++.||+|||+.||+||||+|+||+++.++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 80 MEYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred EecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 9999999999999764 23788999999999999999999999999999999999999999999999998654221
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
.....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...+.......+.. ...
T Consensus 155 ------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~--------- 215 (290)
T cd05580 155 ------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE----GKV--------- 215 (290)
T ss_pred ------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----CCc---------
Confidence 2344688999999999888889999999999999999999999976554333333221 110
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
.++... . ....+++.+||..||.+|| +++|++++
T Consensus 216 ~~~~~~---~--~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 216 RFPSFF---S--PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred cCCccC---C--HHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 000010 0 1122788899999999999 77777643
No 278
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.8e-32 Score=304.76 Aligned_cols=257 Identities=24% Similarity=0.374 Sum_probs=199.3
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCC-----Cc
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAGPP-----DV 907 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~-----~~ 907 (1133)
++++|++.++||+|+||.||+|..+ +++.+++|++.......+.+.+|+++++++ +||||+++++++.... ..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 4678999999999999999999875 578999999876665567899999999999 7999999999986532 34
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.++||||+++++|.+++...... ...+++..+..++.|++.|+.|||+.+++||||+|+||+++.++.++++|||.+..
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKK-GKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCcccee
Confidence 58999999999999998764321 24588999999999999999999999999999999999999999999999999865
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCC-----CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAAST-----GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI 1062 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 1062 (1133)
.... ........|+..|+|||++.. ..++.++||||+||++|+|++|+.||...........+.+ ...
T Consensus 163 ~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~ 235 (275)
T cd06608 163 LDST---LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR----NPP 235 (275)
T ss_pred cccc---hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc----cCC
Confidence 4221 122234568889999998753 3467899999999999999999999965433322222111 100
Q ss_pred cccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1063 SELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+... ....+.+ ...+++.+|+..||++||++.|++++
T Consensus 236 -----~~~~----~~~~~~~--~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 236 -----PTLK----SPENWSK--KFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred -----CCCC----chhhcCH--HHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1110 0011111 12278999999999999999999863
No 279
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.1e-33 Score=332.01 Aligned_cols=203 Identities=19% Similarity=0.272 Sum_probs=158.2
Q ss_pred HhcCCCcccccccccceeEEEEEECC--ceEEEEE------------------EcccCCcCHHHHHHHHHHHhhccCCCe
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQD--GMVLSIR------------------RLRDGTIDENTFRKEAEALGKVKHRNL 894 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK------------------~~~~~~~~~~~~~~E~~~l~~l~hpni 894 (1133)
..++|++.+.||+|+||+||++.++. +..+++| ++.........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999986542 2222222 222222224567899999999999999
Q ss_pred eeEEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC
Q 001171 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD 974 (1133)
Q Consensus 895 v~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~ 974 (1133)
+++++++...+ ..|+|+|++ ++++.+++..................++.||+.||+|||++||+||||||+|||++.+
T Consensus 226 v~l~~~~~~~~-~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 226 LKIEEILRSEA-NTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD 303 (501)
T ss_pred CcEeEEEEECC-eeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 99999998764 458999998 5678877765332222223455677899999999999999999999999999999999
Q ss_pred CceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCC
Q 001171 975 FEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPV 1041 (1133)
Q Consensus 975 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf 1041 (1133)
+.+||+|||+++...... ........||..|+|||++.+..++.++|||||||++|||++|..++
T Consensus 304 ~~vkL~DFGla~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKER--EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred CCEEEEeCCCceecCccc--ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999997553221 11223457999999999999989999999999999999999987644
No 280
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-32 Score=308.62 Aligned_cols=252 Identities=23% Similarity=0.379 Sum_probs=195.6
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|++.++||+|+||.||+|.++ +|..||+|.+..... ..+.+.+|++++++++||||+++++++... ...++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE-GAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC-CeEEEEEe
Confidence 36889999999999999999876 689999998865322 235788999999999999999999988775 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|+++++|.+++..... ...+++..+..++.+++.|+.|||+ .+|+||||||+||+++.++.++++|||.+.....
T Consensus 80 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-- 155 (286)
T cd06622 80 YMDAGSLDKLYAGGVA--TEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA-- 155 (286)
T ss_pred ecCCCCHHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC--
Confidence 9999999998876321 2358999999999999999999996 5999999999999999999999999999864421
Q ss_pred CCCCCCCCCCCCCCccCccccCCCC------CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQ------PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
.......++..|+|||++.+.. ++.++|+||+||++|+|++|+.||...........+..... ......
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~- 230 (286)
T cd06622 156 ---SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD-GDPPTL- 230 (286)
T ss_pred ---CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh-cCCCCC-
Confidence 1223345788999999985443 48899999999999999999999965544433333322211 111111
Q ss_pred cCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1067 EPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. .. .. ....+++.+|++.+|++||++.+++.+
T Consensus 231 ~-------~~---~~--~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 231 P-------SG---YS--DDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred C-------cc---cC--HHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 0 00 11 112278889999999999999999975
No 281
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.1e-33 Score=311.26 Aligned_cols=250 Identities=19% Similarity=0.307 Sum_probs=196.2
Q ss_pred hcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
..+|++.+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|+.+++.++|||++++++++.... ..++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-ELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-EEEEeec
Confidence 45799999999999999999976 4689999999864332 3466889999999999999999999998764 5599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++... .+++..+..++.|++.|+.|||+.||+||||||+||+++.++.++++|||.+.......
T Consensus 97 ~~~~~~L~~~~~~~------~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~- 169 (297)
T cd06656 97 YLAGGSLTDVVTET------CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 169 (297)
T ss_pred ccCCCCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc-
Confidence 99999999998652 37888999999999999999999999999999999999999999999999986432211
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......+++.|+|||...+..++.++||||+||++|+|++|+.||...+.......+.. . ..+....+
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~---~-~~~~~~~~----- 238 (297)
T cd06656 170 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT---N-GTPELQNP----- 238 (297)
T ss_pred --cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc---C-CCCCCCCc-----
Confidence 122334688899999999888899999999999999999999999965443221111100 0 00000000
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
..... ...+++.+||+.+|++||++++++++
T Consensus 239 ----~~~~~--~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 239 ----ERLSA--VFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred ----cccCH--HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001 12278899999999999999999973
No 282
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.1e-32 Score=303.75 Aligned_cols=254 Identities=20% Similarity=0.378 Sum_probs=192.2
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC-----------HHHHHHHHHHHhhccCCCeeeEEEEEeCCC
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID-----------ENTFRKEAEALGKVKHRNLTVLRGYYAGPP 905 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 905 (1133)
+|...+.||+|+||.||+|... +|+.||+|.+...... .+.+.+|++++++++|||++++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE- 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC-
Confidence 5778899999999999999764 6899999987532110 23578899999999999999999998776
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
+..++||||+++++|.+++++.. .+++..+..++.||+.|+.|||+++++||||+|+||+++.++.++++|||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYG-----RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 45599999999999999997642 3788889999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCC--CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQ--PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIS 1063 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 1063 (1133)
+....... ........|+..|+|||++.... ++.++||||+|+++||+++|..||......... .+...... .
T Consensus 156 ~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~~~-~ 230 (272)
T cd06629 156 KKSDDIYD-NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAM---FKLGNKRS-A 230 (272)
T ss_pred cccccccc-ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHH---HHhhcccc-C
Confidence 65322111 11223346888999999987654 789999999999999999999999643322211 11111110 0
Q ss_pred ccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1064 ELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
..++.... ... .....+++.+|+.+||.+||++.||+++
T Consensus 231 ~~~~~~~~------~~~--~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 231 PPIPPDVS------MNL--SPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CcCCcccc------ccC--CHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11111110 000 0122378889999999999999999875
No 283
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.5e-32 Score=301.96 Aligned_cols=249 Identities=21% Similarity=0.307 Sum_probs=197.5
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.+.||+|+||.||++... +|+.||+|++.... ...+.+.+|++++++++||||+++++++... +..++|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN-GNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC-CeEEEEEe
Confidence 5889999999999999999764 68899999986432 2345788999999999999999999998776 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++..... ..+++..+..++.|++.|++|||+.+++|+||+|+||+++.++.++++|||.+.......
T Consensus 80 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~- 155 (256)
T cd08218 80 YCEGGDLYKKINAQRG---VLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV- 155 (256)
T ss_pred cCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-
Confidence 9999999999875332 237888999999999999999999999999999999999999999999999986442211
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......|++.|+|||+..+..++.++|||||||++|+|++|+.||...+..+....+.. +.....
T Consensus 156 --~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~----~~~~~~-------- 221 (256)
T cd08218 156 --ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR----GSYPPV-------- 221 (256)
T ss_pred --hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhc----CCCCCC--------
Confidence 112234578899999999888899999999999999999999999976554443333221 111110
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... . .....+++.+||+.+|.+||++.||+++
T Consensus 222 ~~~---~--~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 222 SSH---Y--SYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ccc---C--CHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 000 0 0112378999999999999999999874
No 284
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-34 Score=312.43 Aligned_cols=251 Identities=20% Similarity=0.340 Sum_probs=194.0
Q ss_pred cCCCcccccccccceeEEEEEECCce-EEEEEEcc-cCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQDGM-VLSIRRLR-DGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~g~-~vavK~~~-~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
+-|.++..||.|+||.||+|..++.. ..|.|++. +....-++|.-|++|+...+||+||++++.|.... ..++..||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-kLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-KLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-ceEEEEee
Confidence 34667788999999999999877544 44556653 22333467888999999999999999998776553 45899999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
|.||..+.++-..+ ..+.+.++..+++|++.||.|||++.|||||||+.|||++-+|.++++|||.+... ...
T Consensus 111 C~GGAVDaimlEL~----r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn---~~t 183 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELG----RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKN---KST 183 (1187)
T ss_pred cCCchHhHHHHHhc----cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccc---hhH
Confidence 99999999887754 34899999999999999999999999999999999999999999999999987322 112
Q ss_pred CCCCCCCCCCCCccCcccc-----CCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 995 ASSSTTPIGSLGYVSPEAA-----STGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
......+.|||+|||||+. ....|+.++||||||+++.||..+.+|....++..+.-.+.+ ...+.++.|
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaK----SePPTLlqP- 258 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK----SEPPTLLQP- 258 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhh----cCCCcccCc-
Confidence 2344568999999999986 356799999999999999999999999765555443333322 222222221
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
......+. ++..+|+..+|..||++++++++
T Consensus 259 ----S~Ws~~F~------DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 259 ----SHWSRSFS------DFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred ----chhhhHHH------HHHHHHHhcCCccCCCHHHHhhC
Confidence 11122222 56778999999999999999854
No 285
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.2e-32 Score=307.91 Aligned_cols=264 Identities=22% Similarity=0.271 Sum_probs=196.3
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC------HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID------ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
+|++.+.||+|+||.||+|..+ +|+.||+|++...... ...+..|++++++++|+||+++++++... ...++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK-SNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC-CEEEE
Confidence 4788899999999999999875 6899999999754332 34567899999999999999999999875 55699
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+ +|+|.+++.... ..+++..+..++.||++||+|||++||+||||||+||+++.++.++|+|||+++....
T Consensus 80 v~e~~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred EEccc-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 99999 999999997643 2488999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccccc--
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLE-- 1067 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1067 (1133)
.. .......++..|+|||.+.+ ..++.++|||||||++|||++|.+||....+.+....+.............+
T Consensus 155 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 155 PN---RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred CC---ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcc
Confidence 21 11223356788999998854 4578999999999999999999888876555443333322211110000000
Q ss_pred --CCcCCC-CCCChhH----HH-HHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1068 --PGLLEL-DPESSEW----EE-FLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1068 --~~~~~~-~~~~~~~----~~-~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+..... ....... .. -....+++.+||+.||++||++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000 0000000 00 1123389999999999999999999974
No 286
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.3e-32 Score=307.40 Aligned_cols=264 Identities=21% Similarity=0.334 Sum_probs=192.7
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.+.||+|+||.||+|.++ +|+.||+|++..... ....+.+|++++++++|||++++++++.+.. ..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK-KLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC-ceEEEEe
Confidence 4788899999999999999875 689999999864322 2356788999999999999999999987764 5599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|++ ++|.+++.... ..+++..++.++.||++||+|||+++|+||||||+||+++.++.++|+|||+++.....
T Consensus 80 ~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~-- 152 (284)
T cd07839 80 YCD-QDLKKYFDSCN----GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP-- 152 (284)
T ss_pred cCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC--
Confidence 996 58888876532 23889999999999999999999999999999999999999999999999998643221
Q ss_pred CCCCCCCCCCCCCccCccccCCCC-CCCCCchhHHHHHHHHHHhCCCCCcc-CChhhHHHHHHHHhhhcc------cccc
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMF-TQDEDIVKWVKKQLQRGQ------ISEL 1065 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~el~tg~~Pf~~-~~~~~~~~~~~~~~~~~~------~~~~ 1065 (1133)
........++..|+|||++.+.. ++.++||||+||++|||++|+.||.. .+..+..+.+.+...... ..+.
T Consensus 153 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 153 -VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred -CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence 11223346788999999986644 68999999999999999999988643 333333332222211100 0000
Q ss_pred ccCCcCCCCCCChhHHHH----H-HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1066 LEPGLLELDPESSEWEEF----L-LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~----~-~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+............+.+. . ...+++.+|++.||.+|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 010000000111111111 1 22378999999999999999999864
No 287
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=6.6e-33 Score=310.25 Aligned_cols=265 Identities=23% Similarity=0.340 Sum_probs=195.4
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
++|++.++||+|+||.||+|.++ +++.||+|++..... ..+.+.+|++++++++||||+++++++... ...++||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK-KRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-CeEEEEE
Confidence 36889999999999999999876 589999999864332 245688999999999999999999999765 4569999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||++++++.++.... ..+++..+..++.||++|++|||+.+|+|||++|+||++++++.++++|||++.......
T Consensus 80 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 80 EFVDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred ecCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 999999888876542 237899999999999999999999999999999999999999999999999986543221
Q ss_pred CCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc--c------c
Q 001171 993 AEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ--I------S 1063 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~--~------~ 1063 (1133)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+....+......-. . .
T Consensus 155 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 155 ---EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred ---cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 12233467889999999865 3468899999999999999999999965544332222222111000 0 0
Q ss_pred ccccCCcCCCCCCChhHH----HH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1064 ELLEPGLLELDPESSEWE----EF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~----~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
...+.............. .. ....+++.+||+.+|++||++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000000000000 01 123379999999999999999999864
No 288
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.8e-32 Score=299.83 Aligned_cols=248 Identities=20% Similarity=0.351 Sum_probs=196.0
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|+..+.||+|+||.||+|... +++.+|+|.+..... ....+.+|++++++++|||++++++.+... ...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED-KALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-CEEEEEEe
Confidence 5888999999999999999764 688999999865332 245788999999999999999999988765 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC-ceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF-EAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~ 992 (1133)
|+++++|.+++.... ...+++..+..++.++++|++|||++||+||||||+||++++++ .++++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~- 155 (256)
T cd08220 80 YAPGGTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK- 155 (256)
T ss_pred cCCCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC-
Confidence 999999999997643 23478899999999999999999999999999999999998654 5799999998654221
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.......++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.......+... ......+ ..
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~-- 225 (256)
T cd08220 156 ---SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG----TFAPISD-RY-- 225 (256)
T ss_pred ---ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc----CCCCCCC-Cc--
Confidence 1223356888999999998888899999999999999999999999765544433333221 1111110 00
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ....+++.+||+.+|++||++.|++++
T Consensus 226 ----~------~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 226 ----S------PDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ----C------HHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0 112278889999999999999999864
No 289
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.9e-32 Score=303.29 Aligned_cols=255 Identities=23% Similarity=0.358 Sum_probs=191.6
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
+++.+.....||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|++++++++|+||+++++++... +..++|+
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~ 84 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN-GFFKIFM 84 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC-CEEEEEE
Confidence 4556666778999999999999765 578899998865432 346788999999999999999999998876 4568999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC-CCceEEeccCcccccccC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA-DFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~ 991 (1133)
||+++++|.+++...... ...++..+..++.||+.|++|||+.||+||||||+||+++. ++.++|+|||.+......
T Consensus 85 e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 85 EQVPGGSLSALLRSKWGP--LKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred ecCCCCCHHHHHHHhccc--CCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 999999999999764211 11277888889999999999999999999999999999986 678999999998644221
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCC--CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQ--PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
. .......|+..|+|||++.+.. ++.++||||+|+++|+|++|+.||..........+....... .+.
T Consensus 163 ~---~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~~ 232 (268)
T cd06624 163 N---PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKI-------HPE 232 (268)
T ss_pred C---CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhcc-------CCC
Confidence 1 1122345788999999986543 789999999999999999999999643322211111110000 000
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. +.. .. ....+++.+||+.+|.+||++.|++++
T Consensus 233 ~---~~~---~~--~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 233 I---PES---LS--AEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred C---Ccc---cC--HHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0 000 00 112278899999999999999999864
No 290
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=288.12 Aligned_cols=247 Identities=23% Similarity=0.354 Sum_probs=198.5
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.++|...++||+|.||.|..++-+ .|+.+|+|++++...- .+.-..|-++++..+||.+..+...|... +..++
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~-drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ-DRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC-ceEEE
Confidence 457889999999999999999654 6999999999865432 23345689999999999999887777665 45599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||..||.|+-++.+.+ .+++...+.+...|+.||.|||+++||.||+|-+|.|+|.||++||+|||+++....
T Consensus 246 VMeyanGGeLf~HLsrer-----~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRER-----VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEccCceEeeehhhhh-----cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 999999999999998743 477888888999999999999999999999999999999999999999999975432
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
.+......+|||.|.|||++....|+.++|.|.+||+||||++|+.||...+.+.+...+... +..++.-+.+.
T Consensus 321 ---~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e--d~kFPr~ls~e- 394 (516)
T KOG0690|consen 321 ---YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME--DLKFPRTLSPE- 394 (516)
T ss_pred ---ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh--hccCCccCCHH-
Confidence 233456789999999999999999999999999999999999999999887777666555432 11111111111
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVF 1109 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~ 1109 (1133)
+..+....+.+||.+|. .+.||.+
T Consensus 395 ---------------AktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 395 ---------------AKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred ---------------HHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 11456678899999995 4566654
No 291
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.7e-32 Score=299.10 Aligned_cols=254 Identities=22% Similarity=0.369 Sum_probs=198.3
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
.++|++.++||+|+||.||+|... +++.+++|.+..... ..+.+.+|++++++++|||++++++++... ...+++||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~l~~e 80 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRR-DKLWIVME 80 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeC-CEEEEEEe
Confidence 357899999999999999999775 578899999875432 356789999999999999999999998775 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++.... ..+++..+..++.|++.|++|||+.+|+||||||+||+++.++.++++|||.+......
T Consensus 81 ~~~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~-- 154 (262)
T cd06613 81 YCGGGSLQDIYQVTR----GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT-- 154 (262)
T ss_pred CCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh--
Confidence 999999999987642 23788999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCCCCCCCCccCccccCCC---CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 994 EASSSTTPIGSLGYVSPEAASTG---QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
........++..|+|||.+.+. .++.++||||+||++|||++|+.||...........+.. ..+ ..+..
T Consensus 155 -~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~----~~~---~~~~~ 226 (262)
T cd06613 155 -IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK----SNF---PPPKL 226 (262)
T ss_pred -hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----ccC---CCccc
Confidence 1122345688899999999776 788999999999999999999999975543332222111 100 00000
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ....+. ....+++.+||..+|.+||++.+|+.+
T Consensus 227 ~----~~~~~~--~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 227 K----DKEKWS--PVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred c----chhhhh--HHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000111 122378999999999999999999853
No 292
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.2e-32 Score=304.75 Aligned_cols=265 Identities=20% Similarity=0.277 Sum_probs=200.1
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.++||+|+||.||+|.+. +|+.||+|++..... ..+.+.+|++++++++|||++++++++... ...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG-SGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC-CeeEEEec
Confidence 5888999999999999999875 689999999875432 246788999999999999999999998875 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+ +++|.+++.... ..+++..++.++.||++|++|||+.+|+|+||||+||+++.++.++++|||.+........
T Consensus 80 ~~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred cc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 99 999999987643 3488999999999999999999999999999999999999999999999999865432211
Q ss_pred CCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc------cccc
Q 001171 994 EASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI------SELL 1066 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~------~~~~ 1066 (1133)
.......|+..|+|||++.+. .++.++||||+||++|||++|++||....+......+.+....... .+..
T Consensus 155 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 155 --RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred --CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcc
Confidence 122345688999999998654 4689999999999999999998888765554444444433221110 0000
Q ss_pred cCCcCCCCCC-ChhHH----HH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1067 EPGLLELDPE-SSEWE----EF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1067 ~~~~~~~~~~-~~~~~----~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+-........ ...+. .. ....+++.+|++.||++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000 00011 01 223389999999999999999999865
No 293
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.8e-32 Score=313.84 Aligned_cols=275 Identities=19% Similarity=0.288 Sum_probs=199.9
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC----CcE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPP----DVR 908 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~ 908 (1133)
.++|++.++||+|+||.||+|.+. +|+.||+|++.... .....+.+|++++++++||||+++++++.... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999764 68999999986322 22356788999999999999999998875432 245
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
++|+||++ +++.+++.. ..+++..+..++.|+++||+|||+.||+||||||+||+++.++.++++|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT------QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 89999995 588877754 23888999999999999999999999999999999999999999999999998754
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc---cc
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI---SE 1064 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~ 1064 (1133)
..............|+..|+|||++.+ ..++.++||||+||++|+|++|+.||...+.......+......... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNC 236 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 332222222234578899999998754 46789999999999999999999999765443333333222111100 00
Q ss_pred cccCCcC----CCC-CCChhHH----HH-HHhHhhhhccCCCCCCCCCCHHHHHHH--HhcCcCC
Q 001171 1065 LLEPGLL----ELD-PESSEWE----EF-LLGVKVGLLCTAPDPLDRPSMADIVFM--LEGCRVG 1117 (1133)
Q Consensus 1065 ~~~~~~~----~~~-~~~~~~~----~~-~~~~~li~~Cl~~dP~~RPs~~evl~~--Le~~~~~ 1117 (1133)
..+.... ... .....+. .. ....+++.+||+.||++||++.|++++ ++.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 0000000 000 0000000 01 122389999999999999999999987 6655443
No 294
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=341.97 Aligned_cols=252 Identities=24% Similarity=0.381 Sum_probs=196.7
Q ss_pred hcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
+-+|.....||.|.||.||.|.. .+|+..|||-++..... .+.+.+|+.++..++|||+|+++|+=...+.. ++.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv-~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV-YIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH-HHH
Confidence 44788889999999999999965 57999999998643322 35678999999999999999999987765444 899
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
||||++|+|.+.+...+. .++.....+..|++.|++|||++|||||||||.||+++.+|.+|.+|||.|+.+...
T Consensus 1313 MEyC~~GsLa~ll~~gri-----~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRI-----EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHhccCcHHHHHHhcch-----hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 999999999999987433 556666678899999999999999999999999999999999999999999876544
Q ss_pred C-CCCCCCCCCCCCCCccCccccCCCC---CCCCCchhHHHHHHHHHHhCCCCCccCChh-hHHHHHHHHhhhccccccc
Q 001171 992 P-AEASSSTTPIGSLGYVSPEAASTGQ---PTKEADVYSFGIVLLEILTGRKPVMFTQDE-DIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 992 ~-~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~el~tg~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 1066 (1133)
. ..........||+.|||||++.+.. ...++||||+|||+.||+||+.||...+.+ .+.-. +..+..+++.
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~----V~~gh~Pq~P 1463 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH----VAAGHKPQIP 1463 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH----HhccCCCCCc
Confidence 2 1222334678999999999996543 578899999999999999999999754432 22222 2222222222
Q ss_pred cCCcCCCCCCChhHHHHHH-hHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1067 EPGLLELDPESSEWEEFLL-GVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~-~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.. ... .-+++.+|+..||+.|-++.|++++=
T Consensus 1464 ~~--------------ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1464 ER--------------LSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred hh--------------hhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 21 111 12788899999999998888887653
No 295
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1e-32 Score=307.13 Aligned_cols=246 Identities=22% Similarity=0.317 Sum_probs=193.9
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
.|+..+.||+|+||.||+|.+. +++.||+|.+..... ..+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT-KLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC-ceEEEEEc
Confidence 4667788999999999999764 578999998864332 2357889999999999999999999987754 55999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+++++|.+++.. ..+++..+..++.|+++|+.|||+++++|+||+|+||+++.++.++++|||++.......
T Consensus 84 ~~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06642 84 LGGGSALDLLKP------GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred cCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc--
Confidence 999999998864 237888999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||...........+.. .. .+...
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~----~~-----~~~~~--- 222 (277)
T cd06642 156 -IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK----NS-----PPTLE--- 222 (277)
T ss_pred -hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhc----CC-----CCCCC---
Confidence 112234578899999999888899999999999999999999999864433332221111 10 01000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. ......+++.+||+.+|++||++.|++++
T Consensus 223 ~~-----~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 223 GQ-----YSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred cc-----cCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 00 01122378999999999999999999975
No 296
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.1e-32 Score=299.10 Aligned_cols=258 Identities=21% Similarity=0.355 Sum_probs=199.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|++.+.||+|+||+||+|... ++..+|+|++..... ..+.+.+|+++++.++|+|++++++.+... +..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG-DELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC-CEEEEEEe
Confidence 46899999999999999999764 578999999864332 346789999999999999999999988765 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++..... ...+++.....++.|++.|++|||+.||+||||||+||++++++.++++|||++........
T Consensus 80 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 80 YLSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred ccCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999999999976432 13478999999999999999999999999999999999999999999999999876543322
Q ss_pred CC-CCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 994 EA-SSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 994 ~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
.. .......|+..|+|||++... .++.++|||||||++|||++|+.||.............+ .. .+...
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~---~~------~~~~~ 228 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ---ND------PPSLE 228 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc---CC------CCCcC
Confidence 21 122344688999999998776 789999999999999999999999975544322222111 10 00000
Q ss_pred CCCCCChhHHHHHH-hHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1072 ELDPESSEWEEFLL-GVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~-~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
....+..+.. ..+++.+|++.||++||++.|++++
T Consensus 229 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 229 ----TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred ----CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000111111 2378899999999999999999864
No 297
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.8e-32 Score=308.02 Aligned_cols=207 Identities=22% Similarity=0.344 Sum_probs=169.3
Q ss_pred CCCcccccccccceeEEEEEEC---CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ---DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRL 909 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~ 909 (1133)
+|++.+.||+|+||.||+|..+ .+..||+|.+.... .....+.+|++++++++||||+++++++... ....+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999775 47899999997632 1235678899999999999999999999765 24568
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC----CCceEEeccCcc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA----DFEAHLSEFGLD 985 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~----~~~~kl~Dfg~a 985 (1133)
+||||++ +++.+++..........++...+..++.||+.|++|||+.+|+||||||+||+++. ++.+|++|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999996 57777776544433345888999999999999999999999999999999999999 899999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCC
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQ 1045 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~ 1045 (1133)
+................++..|+|||++.+. .++.++|||||||++|+|++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 7553322212223345678899999988664 57899999999999999999999996543
No 298
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.9e-32 Score=307.75 Aligned_cols=255 Identities=20% Similarity=0.304 Sum_probs=195.7
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
+|++.+.||+|+||.||++.++ .++.||+|.+..... ..+.+.+|+++++.++||||+++++.+... ...++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK-RHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC-CEEEEEE
Confidence 6888999999999999999875 478999999865432 234677899999999999999999998875 4559999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++++|.+++...+ .+++..+..++.|++.|++|||+.+|+||||||+||+++.++.++++|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNIG-----ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999997643 37888899999999999999999999999999999999999999999999986421110
Q ss_pred CC------------CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhc
Q 001171 993 AE------------ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060 (1133)
Q Consensus 993 ~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 1060 (1133)
.. ........++..|+|||.+.+..++.++|+|||||++|||++|..||......+........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~---- 231 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD---- 231 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc----
Confidence 00 00112245788999999998888999999999999999999999999765544433332221
Q ss_pred cccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1061 QISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
... .+... .. ... ...+++.+||+.||++||++.++.+.|+.
T Consensus 232 ~~~---~~~~~---~~---~~~--~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 232 DIE---WPEGD---EA---LPA--DAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ccC---CCCcc---cc---CCH--HHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 100 00000 00 000 11378999999999999996656555554
No 299
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.4e-33 Score=328.24 Aligned_cols=254 Identities=21% Similarity=0.363 Sum_probs=190.9
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCC--------
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGP-------- 904 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-------- 904 (1133)
..+|+..++||+|+||.||+++.+ +|+.||||+++-... .-..+.+|++.+.+++|||||+++..+.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 446788899999999999999887 799999999975532 234678899999999999999986433100
Q ss_pred ----------------------------------------------C---------------------------------
Q 001171 905 ----------------------------------------------P--------------------------------- 905 (1133)
Q Consensus 905 ----------------------------------------------~--------------------------------- 905 (1133)
.
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0
Q ss_pred -------------------------------CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHH
Q 001171 906 -------------------------------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL 954 (1133)
Q Consensus 906 -------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~L 954 (1133)
...||-||||+..++.+++++.... -.....++++++|++||+|+
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHHHHHHHHH
Confidence 1237889999998888888875432 13567788999999999999
Q ss_pred hcCCceecccCccceeeCCCCceEEeccCccccccc------C---------CCCCCCCCCCCCCCCccCccccCCCC--
Q 001171 955 HSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA------T---------PAEASSSTTPIGSLGYVSPEAASTGQ-- 1017 (1133)
Q Consensus 955 H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------~---------~~~~~~~~~~~gt~~y~aPE~~~~~~-- 1017 (1133)
|++|||||||||.||++|++..|||+|||+|..... . .......+..+||.-|+|||++.+..
T Consensus 714 H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 714 HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 999999999999999999999999999999976220 0 11122346678999999999997654
Q ss_pred -CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCC
Q 001171 1018 -PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAP 1096 (1133)
Q Consensus 1018 -~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~ 1096 (1133)
|+.|+|+||+|||++||+. ||.. ..+ ...+...++.+.++.. +.+. ..+....+++|.++++.
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~T--sME-Ra~iL~~LR~g~iP~~--~~f~--------~~~~~~e~slI~~Ll~h 857 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGT--SME-RASILTNLRKGSIPEP--ADFF--------DPEHPEEASLIRWLLSH 857 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCc--hHH-HHHHHHhcccCCCCCC--cccc--------cccchHHHHHHHHHhcC
Confidence 9999999999999999973 5632 112 2233344445554443 1110 11122234789999999
Q ss_pred CCCCCCCHHHHHH
Q 001171 1097 DPLDRPSMADIVF 1109 (1133)
Q Consensus 1097 dP~~RPs~~evl~ 1109 (1133)
||.+|||+.|++.
T Consensus 858 dP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 858 DPSKRPTATELLN 870 (1351)
T ss_pred CCccCCCHHHHhh
Confidence 9999999999984
No 300
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.1e-32 Score=299.26 Aligned_cols=252 Identities=21% Similarity=0.357 Sum_probs=199.1
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeC-CCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAG-PPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~~lV~ 912 (1133)
+|++.+.||+|+||.||+|... +++.||+|.+...... .+.+.+|++++++++|||++++++++.. .....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999764 6789999998654332 3567889999999999999999998754 344568999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHh-----cCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLH-----SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
||+++++|.+++..... ....+++..++.++.+|+.|++||| +.+++||||||+||+++.++.++++|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 99999999999976532 2345899999999999999999999 88999999999999999999999999999875
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
..... .......++..|+|||++.+..++.++||||||+++|+|++|+.||...+.....+.+.. ......
T Consensus 160 ~~~~~---~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~-- 230 (265)
T cd08217 160 LGHDS---SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE----GKFRRI-- 230 (265)
T ss_pred ccCCc---ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc----CCCCCC--
Confidence 43211 112334688999999999888899999999999999999999999976654443333222 111110
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... +. ....+++.+|++.+|++||++.||+++
T Consensus 231 ------~~~---~~--~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 231 ------PYR---YS--SELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ------ccc---cC--HHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000 00 112378899999999999999999875
No 301
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.1e-32 Score=301.35 Aligned_cols=260 Identities=22% Similarity=0.329 Sum_probs=197.5
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~lV~ 912 (1133)
++|+..++||.|++|.||+|... +++.+|+|.+..... ....+.+|++++++++||||+++++++... ....++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999875 589999999865432 246788999999999999999999988543 34568999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++++|.+++..... ....+++.....++.||+.|++|||+.+++|+||+|+||+++.++.++++|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~- 158 (287)
T cd06621 81 EYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS- 158 (287)
T ss_pred EecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc-
Confidence 99999999998875432 2345788899999999999999999999999999999999999999999999998643221
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCCh--hhHHHHHHHHhhhccccccccCCc
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQD--EDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
......++..|+|||.+.+..++.++||||+||++|+|++|+.||..... ....+.. ........... .
T Consensus 159 ----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~-~--- 229 (287)
T cd06621 159 ----LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL-SYIVNMPNPEL-K--- 229 (287)
T ss_pred ----ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH-HHHhcCCchhh-c---
Confidence 11234577899999999888899999999999999999999999975422 1111111 11111111111 0
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
........+.+. ..+++.+||+.+|++||++.|++++
T Consensus 230 -~~~~~~~~~~~~--~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 230 -DEPGNGIKWSEE--FKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred -cCCCCCCchHHH--HHHHHHHHcCCCcccCCCHHHHHhC
Confidence 000111112221 2389999999999999999999974
No 302
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.4e-32 Score=304.39 Aligned_cols=265 Identities=22% Similarity=0.331 Sum_probs=192.8
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|++.+.||+|++|.||+|..+ +++.||+|.+..... ....+.+|++++++++||||+++++++... ...++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTK-KTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecC-CeEEEEEe
Confidence 57899999999999999999775 689999999864332 234567899999999999999999998865 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|++ ++|.+++.+.. ..+++.....++.|+++||.|||+++|+||||||+||+++.++.++++|||+++......
T Consensus 84 ~~~-~~L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~- 157 (291)
T cd07844 84 YLD-TDLKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS- 157 (291)
T ss_pred cCC-CCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC-
Confidence 997 59999887643 247888999999999999999999999999999999999999999999999986432111
Q ss_pred CCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCC-hhhHHHHHHHHhhhcc---ccc----
Q 001171 994 EASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQ-DEDIVKWVKKQLQRGQ---ISE---- 1064 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~-~~~~~~~~~~~~~~~~---~~~---- 1064 (1133)
.......++..|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+.+...... ...
T Consensus 158 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 158 --KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred --ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 11122346788999999865 457899999999999999999999996543 2222222222111100 000
Q ss_pred --cccCCcCCCCCCC-----hhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 --LLEPGLLELDPES-----SEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 --~~~~~~~~~~~~~-----~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
............. ..........+++.+|++.+|++||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000000000000 000001223478999999999999999998753
No 303
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=5.6e-32 Score=309.95 Aligned_cols=281 Identities=21% Similarity=0.301 Sum_probs=204.9
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCC-CCcE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKV-KHRNLTVLRGYYAGP-PDVR 908 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~-~~~~ 908 (1133)
..++|++.++||+|+||.||+|.+. +|+.+|+|++.... .....+.+|+++++++ +||||+++++++... ....
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4568999999999999999999875 58899999885422 2235677899999999 999999999988653 3456
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
++||||++ ++|.+++... .+++..+..++.||+.||+|||+.||+||||||+||+++.++.++++|||+++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 89999996 6998888652 3788889999999999999999999999999999999999999999999998755
Q ss_pred ccCCCC--CCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc----
Q 001171 989 IATPAE--ASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ---- 1061 (1133)
Q Consensus 989 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---- 1061 (1133)
...... ........|+..|+|||++.+ ..++.++|||||||++|+|++|+.||......+....+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 332211 112234568899999998754 4578999999999999999999999976555443333322211100
Q ss_pred -------ccccccCCcCCCCCCChhHHH-----HHHhHhhhhccCCCCCCCCCCHHHHHHH--HhcCcCCCCCCCCCC
Q 001171 1062 -------ISELLEPGLLELDPESSEWEE-----FLLGVKVGLLCTAPDPLDRPSMADIVFM--LEGCRVGPDMPSSAD 1125 (1133)
Q Consensus 1062 -------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~~--Le~~~~~~~~~~~~~ 1125 (1133)
....++ ..... ......+ -....+++.+||+.||++||++.+++++ ++.+......++...
T Consensus 238 ~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~~~~~~ 312 (337)
T cd07852 238 ESIKSPFAATMLD-SLPSR--PRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDEPVLPY 312 (337)
T ss_pred HHHHhhhHHHhhh-hcccc--cccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCCCCCCC
Confidence 000000 00000 0000000 1122478999999999999999999976 566655544444333
No 304
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.9e-32 Score=303.33 Aligned_cols=247 Identities=21% Similarity=0.316 Sum_probs=195.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC--cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT--IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
..|+..+.||+|+||.||+|.++ .+..||+|.+.... ...+.+.+|++++++++|||++++++++.+. ...++|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG-TKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-CEEEEEEe
Confidence 35778899999999999999775 58999999886432 2245788999999999999999999999876 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++|+|.+++... .+++.....++.|++.|++|+|+.+++|+||+|+||+++.++.++++|||++.......
T Consensus 83 ~~~~~~L~~~i~~~------~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06640 83 YLGGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred cCCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-
Confidence 99999999998642 37788888999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......++..|+|||++.+..++.++|||||||++|||++|+.||...........+ ..... +...
T Consensus 156 --~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~----~~~~~-----~~~~-- 222 (277)
T cd06640 156 --IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI----PKNNP-----PTLT-- 222 (277)
T ss_pred --cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh----hcCCC-----CCCc--
Confidence 1223346788999999998888999999999999999999999999755433322211 11100 0000
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. .......+++.+||+.+|++||++.|++++
T Consensus 223 ----~--~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 223 ----G--EFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ----h--hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0 011122378999999999999999999876
No 305
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.3e-32 Score=308.12 Aligned_cols=248 Identities=19% Similarity=0.325 Sum_probs=193.6
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.|.....||+|+||.||++... ++..||||++..... ..+.+.+|+.++++++|||++++++.+... +..++||||+
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-~~~~lv~e~~ 101 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG-DELWVVMEFL 101 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC-CeEEEEEeCC
Confidence 3444567999999999999764 588999999864332 245688999999999999999999998776 4559999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++.. ..+++..+..++.||+.|++|||+++|+||||||+||+++.++.++++|||++.......
T Consensus 102 ~~~~L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--- 172 (292)
T cd06658 102 EGGALTDIVTH------TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--- 172 (292)
T ss_pred CCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc---
Confidence 99999998854 237888999999999999999999999999999999999999999999999986432211
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||...+.......+.... .+.......
T Consensus 173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 243 (292)
T cd06658 173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL---------PPRVKDSHK 243 (292)
T ss_pred ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC---------CCccccccc
Confidence 12233568899999999988889999999999999999999999997655443332222111 111100000
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. .. ...+++.+|+..||.+||+++|++++
T Consensus 244 ~----~~--~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 244 V----SS--VLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred c----CH--HHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 11 11267888999999999999999975
No 306
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.6e-32 Score=299.50 Aligned_cols=252 Identities=21% Similarity=0.293 Sum_probs=192.9
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC------cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC-CcE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT------IDENTFRKEAEALGKVKHRNLTVLRGYYAGPP-DVR 908 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~ 908 (1133)
.+|++.+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||+++++++.... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46889999999999999999764 58999999875321 12357889999999999999999999986543 445
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
++||||+++++|.+++.... .+++.....++.|++.|+.|||+.||+|+||||+||+++.++.++++|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-----~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-----ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 79999999999999987532 3678888899999999999999999999999999999999999999999998754
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
..............++..|+|||++.+..++.++|+|||||++|||++|+.||........ +.+..... ....+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~-~~~~~p~ 232 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA---IFKIATQP-TKPMLPD 232 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH---HHHHHcCC-CCCCCCc
Confidence 3211111122345688999999999888889999999999999999999999965433222 12211111 1111111
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. . ....+++.+|+. +|.+||++.+++.+
T Consensus 233 ~~----------~--~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 233 GV----------S--DACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred cc----------C--HHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 11 0 112278888998 57999999988764
No 307
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.1e-32 Score=300.74 Aligned_cols=253 Identities=21% Similarity=0.332 Sum_probs=194.6
Q ss_pred CCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc-------CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 838 QFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI-------DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
+|+..++||+|+||.||+|.. .+++.||+|++..... ..+.+.+|++++++++|||++++++++.+.+ ..+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS-HFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC-eEE
Confidence 478889999999999999976 5689999999864321 1357889999999999999999999998764 458
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC-ceEEeccCccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF-EAHLSEFGLDRLA 988 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~ 988 (1133)
+||||+++++|.+++...+ .+++..+..++.|++.|++|||++|++||||||+||+++.++ .++++|||.+...
T Consensus 80 ~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYG-----AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEEeccCCCcHHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 9999999999999997643 378889999999999999999999999999999999998876 5899999998655
Q ss_pred ccCCCCC-CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 989 IATPAEA-SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 989 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
....... .......++..|+|||++.+..++.++||||+||++|+|++|+.||...........+.+.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 229 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTA----- 229 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCC-----
Confidence 3321111 1122346888999999998888999999999999999999999999654433222222221111100
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
+.. +.. . .....+++.+|+..+|++||++.|+++
T Consensus 230 ~~~---~~~---~--~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 230 PSI---PEH---L--SPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCC---chh---h--CHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000 000 0 011226888999999999999999985
No 308
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=307.50 Aligned_cols=249 Identities=18% Similarity=0.258 Sum_probs=202.3
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
....|.+...||+|.|++|..|++. ++..||||.+.+...+ .+.+.+|+++|+.++|||||+++.+.... ...|+
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~-~~lyl 132 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE-ATLYL 132 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec-ceeEE
Confidence 3457889999999999999999775 6999999998765443 24578999999999999999999999876 44599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+.+|.+++++.+.++ ........++.|+.+|++|||+++|||||||++||+++.+..+||+|||++.++.
T Consensus 133 V~eya~~ge~~~yl~~~gr-----~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR-----MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred EEEeccCchhHHHHHhccc-----chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec-
Confidence 9999999999999998765 3346777888999999999999999999999999999999999999999997653
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCC-CCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQP-TKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
........+|++.|.|||++.+..| ++.+|+||+|+++|-|+.|..||++..-.+....+.... -+++..+
T Consensus 207 ---~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk--~rIp~~m--- 278 (596)
T KOG0586|consen 207 ---YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK--YRIPFYM--- 278 (596)
T ss_pred ---ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeee--eccccee---
Confidence 2345567899999999999998877 789999999999999999999997654433333222211 1111111
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
.. .+-+++++++..+|.+|+++++|.++=
T Consensus 279 -------s~------dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 279 -------SC------DCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred -------ec------hhHHHHHHhhccCccccCCHHHhhhhc
Confidence 11 122678889999999999999998754
No 309
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.8e-32 Score=302.97 Aligned_cols=251 Identities=22% Similarity=0.378 Sum_probs=196.8
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
++|+..+.||+|+||.||+|.++ +++.||+|++..... ..+.+.+|++++++++||||+++++++... ...++|+|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN-GDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC-CEEEEEEE
Confidence 36788899999999999999876 589999999865432 345788999999999999999999998776 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|+++++|.+++.... ..+++.....++.|++.|++|+|+ .+++||||||+||+++.++.++++|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 80 YMDGGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred ecCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 999999999998643 347888899999999999999999 999999999999999999999999999986442211
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCC--hhhHHHHHHHHhhhccccccccCCc
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQ--DEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
. ....++..|+|||++.+..++.++||||+|+++|+|++|+.||...+ .......+....... ... .
T Consensus 156 ~-----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-----~ 224 (265)
T cd06605 156 A-----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-PPR-----L 224 (265)
T ss_pred h-----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-CCC-----C
Confidence 1 11568889999999988899999999999999999999999996442 122222222221111 000 0
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... ... ....+++.+||..||++||++.|++++
T Consensus 225 ---~~~--~~~--~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 225 ---PSG--KFS--PDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred ---Chh--hcC--HHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 000 000 112378899999999999999999854
No 310
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6.1e-32 Score=303.90 Aligned_cols=268 Identities=20% Similarity=0.260 Sum_probs=195.3
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCC----c
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVK-HRNLTVLRGYYAGPPD----V 907 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~----~ 907 (1133)
++|++.+.||+|+||.||+|.+. +|+.||+|++..... ....+.+|+++++++. ||||+++++++...+. .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36889999999999999999875 689999999864322 2356888999999995 6999999998865433 3
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC-CCceEEeccCccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA-DFEAHLSEFGLDR 986 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~ 986 (1133)
.++||||+++ ++.+++..........+++..++.++.||+.||+|||+++|+||||||+||+++. ++.++++|||+++
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 5899999975 8999887654332345899999999999999999999999999999999999998 8899999999986
Q ss_pred ccccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccc
Q 001171 987 LAIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISEL 1065 (1133)
Q Consensus 987 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1133)
...... .......+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+.+....+. ..
T Consensus 160 ~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~ 234 (295)
T cd07837 160 AFSIPV---KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPT--EQ 234 (295)
T ss_pred ecCCCc---cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCC--hh
Confidence 442211 11223356788999998865 4578999999999999999999999976554433333222211110 00
Q ss_pred ccCCc------CCCCC-CChhH----HHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1066 LEPGL------LELDP-ESSEW----EEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1066 ~~~~~------~~~~~-~~~~~----~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
..+.. ...+. ..... +.. ....+++.+|+++||.+||++.|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 00000 00000 011 112378999999999999999999854
No 311
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.8e-32 Score=305.99 Aligned_cols=267 Identities=22% Similarity=0.337 Sum_probs=198.5
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCC-CcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPP-DVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~~l 910 (1133)
.++|++.+.||+|+||.||+|..+ +|+.||+|++...... ...+.+|++++++++|+|++++++++.... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 457999999999999999999775 5899999998643222 235678999999999999999999987543 45689
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||++ ++|.+++.... ..+++..+..++.||+.|++|||+.|++||||||+||+++.++.++++|||+++....
T Consensus 86 v~e~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999996 58888887643 3488999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccc------
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIS------ 1063 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~------ 1063 (1133)
.. .......++..|+|||++.+ ..++.++||||+||++|||++|+.||...+..+....+..........
T Consensus 161 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 161 PA---KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred cc---CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 21 11223345788999999865 457899999999999999999999998766665555544432211000
Q ss_pred ccccCCcCCCC--C--CC-hhHHHHH-HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1064 ELLEPGLLELD--P--ES-SEWEEFL-LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1064 ~~~~~~~~~~~--~--~~-~~~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
........... + .. ....... ...+++.+|++.||++||++.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000000 0 00 0000011 12379999999999999999999975
No 312
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-33 Score=296.83 Aligned_cols=244 Identities=22% Similarity=0.318 Sum_probs=191.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
..|..-++||+|+||.||-++.+ +|+.+|.|++.+... .+.....|-+|++++..+.||.+-..|+.+ +..++|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk-d~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK-DALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC-CceEEE
Confidence 46778899999999999999765 699999998854322 345667899999999999999987777766 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
+..|.||+|.-++...+. ..+++.....++.+|+.||+|||+.+||.||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~---~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~- 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN---PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE- 339 (591)
T ss_pred EEeecCCceeEEeeccCC---CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC-
Confidence 999999999988876553 4489999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
......++||.+|||||++..+.|+...|.||+||++|||+.|+.||.......-.+.+.+...... .
T Consensus 340 ---g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~-------~-- 407 (591)
T KOG0986|consen 340 ---GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDP-------E-- 407 (591)
T ss_pred ---CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcch-------h--
Confidence 2334456899999999999999999999999999999999999999965443333333333322110 0
Q ss_pred CCCCCChhHHHHHHhH-hhhhccCCCCCCCCCC
Q 001171 1072 ELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPS 1103 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs 1103 (1133)
++ . +.+...+ ++-...+..||++|..
T Consensus 408 ey---~---~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 408 EY---S---DKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred hc---c---cccCHHHHHHHHHHHccCHHHhcc
Confidence 00 0 1122222 4556678889999863
No 313
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.1e-32 Score=302.30 Aligned_cols=253 Identities=22% Similarity=0.382 Sum_probs=201.3
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
.++.|+..+.||+|+||.||+|.++ ++..|++|++.......+.+.+|++++++++|+|++++++++... ...++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVG-DELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEEC-CEEEEEEe
Confidence 4557888899999999999999876 688999999975544467789999999999999999999998876 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++.... ..+++..+..++.+++.|++|||+.||+|+||+|+||+++.++.++|+|||.+.......
T Consensus 96 ~~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 170 (286)
T cd06614 96 YMDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK- 170 (286)
T ss_pred ccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence 999999999998753 248999999999999999999999999999999999999999999999999875432211
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||...........+.. .......+..
T Consensus 171 --~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~---- 240 (286)
T cd06614 171 --SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT----KGIPPLKNPE---- 240 (286)
T ss_pred --hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----cCCCCCcchh----
Confidence 122334578899999999888899999999999999999999999975544332222211 1111111100
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+.. ...+++.+|++.+|.+||++.+++++
T Consensus 241 -----~~~~--~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 241 -----KWSP--EFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -----hCCH--HHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0011 12378999999999999999999864
No 314
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.8e-32 Score=302.09 Aligned_cols=252 Identities=19% Similarity=0.341 Sum_probs=189.2
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHH-HhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEA-LGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
++|++.+.||+|+||.||+|.+. +|+.||+|++..... ....+..|+.+ ++..+|||++++++++.... ..++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~-~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG-DVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC-cEEEEh
Confidence 36889999999999999999775 689999999875432 23455666665 56678999999999998764 459999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC-CceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
||++ |+|.+++...... ...+++..+..++.||+.|++|||++ +++||||||+||+++.++.+||+|||.++.....
T Consensus 80 e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhc-ccHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9995 7898888764322 24589999999999999999999997 9999999999999999999999999998654221
Q ss_pred CCCCCCCCCCCCCCCccCccccCC----CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAAST----GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
.......|+..|+|||++.+ ..++.++|+||+||++|||++|+.||...... .+.+....... ......
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~-~~~~~~ 230 (283)
T cd06617 158 ----VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP--FQQLKQVVEEP-SPQLPA 230 (283)
T ss_pred ----cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC--HHHHHHHHhcC-CCCCCc
Confidence 11223467889999998864 44688999999999999999999999642211 11111111110 011100
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. +.+ ...+++.+||..+|++||++.+++++
T Consensus 231 ~~----------~~~--~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 231 EK----------FSP--EFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred cc----------cCH--HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 001 12378899999999999999999863
No 315
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.98 E-value=8.5e-32 Score=310.35 Aligned_cols=264 Identities=21% Similarity=0.265 Sum_probs=196.4
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCC-----
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPP----- 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 905 (1133)
..++|+..+.||+|+||.||+|... +|+.||+|++..... ..+.+.+|++++++++||||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4678999999999999999999765 689999999864322 2346778999999999999999999886432
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
...++||||+. ++|.+.+... ++...+..++.|++.||+|||+.||+||||||+||+++.++.+|++|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~-------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD-------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc-------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 24589999995 5888887641 778888999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc----
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ---- 1061 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---- 1061 (1133)
+..... .......++..|+|||++.+..++.++||||+||++|+|++|+.||...+.......+.+......
T Consensus 166 ~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 166 RTAGTS----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred eeCCCC----CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 754221 122334678899999999998999999999999999999999999976554433333322111100
Q ss_pred ------ccccccCCc-------CCC------CCCChh-H-HHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1062 ------ISELLEPGL-------LEL------DPESSE-W-EEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1062 ------~~~~~~~~~-------~~~------~~~~~~-~-~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.....+... .+. ...... . .......+++.+|++.||++||++.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 000 000000 0 011122389999999999999999999965
No 316
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.98 E-value=6.7e-32 Score=305.13 Aligned_cols=247 Identities=23% Similarity=0.374 Sum_probs=192.3
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-C---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-D---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
...|...+.||+|+||.||+|... +|+.||+|++..... . .+.+.+|+++++.++|||++++++++.... ..++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-~~~l 92 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH-TAWL 92 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC-eEEE
Confidence 356889999999999999999775 689999999864322 1 246889999999999999999999998764 4589
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||++ |++.+++.... ..+++..+..++.|++.|+.|||+.+|+||||+|+||+++.++.++++|||++.....
T Consensus 93 v~e~~~-g~l~~~~~~~~----~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 93 VMEYCL-GSASDILEVHK----KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred EHHhhC-CCHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 999996 67777776432 2488999999999999999999999999999999999999999999999998864321
Q ss_pred CCCCCCCCCCCCCCCCccCccccC---CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccccc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAAS---TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLE 1067 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1133)
.....++..|+|||++. ...++.++||||||+++|||++|+.||...+.......+.. ...+...
T Consensus 168 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~----~~~~~~~- 235 (307)
T cd06607 168 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----NDSPTLS- 235 (307)
T ss_pred -------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc----CCCCCCC-
Confidence 12346788999999874 45678999999999999999999999976554333222211 1100000
Q ss_pred CCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1068 PGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1068 ~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
. ..+.. ...+++.+||+.||++||++.+++.+.
T Consensus 236 -------~--~~~~~--~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 236 -------S--NDWSD--YFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred -------c--hhhCH--HHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 0 01111 123789999999999999999998754
No 317
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.98 E-value=8.1e-32 Score=302.49 Aligned_cols=266 Identities=20% Similarity=0.283 Sum_probs=196.8
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCC-CcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPP-DVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~~lV 911 (1133)
++|++.+.||+|+||.||+|.++ +++.+|+|.++..... ...+.+|++++++++||||+++++++.... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888999999999999999876 5889999998643322 235678999999999999999999886542 556999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||++ ++|.+++.... ..+++..+..++.||+.||+|||+.+++||||||+||+++.++.++++|||+++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99996 59999887643 24899999999999999999999999999999999999999999999999998754322
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCC-CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc---------
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ--------- 1061 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~--------- 1061 (1133)
. .......++..|+|||.+.+.. ++.++|+||+|+++|||++|+.||......+....+........
T Consensus 160 ~---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 160 L---KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred c---cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence 1 1223345788999999986544 68999999999999999999999986665554444333221100
Q ss_pred ccccccCCcCCCCC--CChhHHH--HH-HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1062 ISELLEPGLLELDP--ESSEWEE--FL-LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1062 ~~~~~~~~~~~~~~--~~~~~~~--~~-~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+............. ....+.. +. ...+++.+|++.||++||++.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000000000 0000000 01 12278999999999999999999864
No 318
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.98 E-value=5.4e-32 Score=303.22 Aligned_cols=266 Identities=23% Similarity=0.330 Sum_probs=196.7
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
++|++.++||+|+||.||+|.++ +++.||+|++..... ..+.+.+|++++++++|+||+++++++... +..++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK-GRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC-CEEEEEE
Confidence 36889999999999999999876 588999999864322 246789999999999999999999999875 4569999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||++++.+..+.... ..+++..+..++.+|+.|++|||+.+++|||++|+||++++++.++++|||.+.......
T Consensus 80 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 80 EYVERTLLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred ecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 999887666555432 237889999999999999999999999999999999999999999999999986543322
Q ss_pred CCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccc----cccc
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIS----ELLE 1067 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~----~~~~ 1067 (1133)
. .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||......+............... ...+
T Consensus 155 ~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 155 A--SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred c--ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccC
Confidence 1 122345678899999999887 78999999999999999999999997655443333322211100000 0000
Q ss_pred CCcC--CCCCCC--hhHH----H--HHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1068 PGLL--ELDPES--SEWE----E--FLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1068 ~~~~--~~~~~~--~~~~----~--~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+... ...... ...+ . -....+++.+||..+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0000 000000 0000 0 1123389999999999999999999853
No 319
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.98 E-value=3.3e-32 Score=305.67 Aligned_cols=247 Identities=17% Similarity=0.289 Sum_probs=193.5
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCC-cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT-IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
|.....||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.+++.++|||++++++++... +..++||||++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-~~~~iv~e~~~ 101 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG-EELWVLMEFLQ 101 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeC-CeEEEEEecCC
Confidence 444567999999999999764 68999999985432 2345788999999999999999999988765 45599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+++|.+++.. ..+++..+..++.|++.|++|||+.+|+||||||+||+++.++.++|+|||++...... ..
T Consensus 102 ~~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~---~~ 172 (297)
T cd06659 102 GGALTDIVSQ------TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---VP 172 (297)
T ss_pred CCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc---cc
Confidence 9999988754 23788999999999999999999999999999999999999999999999998643221 11
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......+....+.. .... ........
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~ 243 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD----SPPP-----KLKNAHKI 243 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----cCCC-----CccccCCC
Confidence 22345688999999999888899999999999999999999999976554433332211 1100 00000000
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ....+++.+|++.+|++||++.|++++
T Consensus 244 ~------~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 244 S------PVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred C------HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1 112368889999999999999999985
No 320
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.98 E-value=5.3e-32 Score=301.40 Aligned_cols=247 Identities=21% Similarity=0.388 Sum_probs=192.7
Q ss_pred CCCcccccccccceeEEEEEE-CCceEEEEEEcccCC--cCHHHHHHHHHHHhhcc---CCCeeeEEEEEeCCCCcEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGT--IDENTFRKEAEALGKVK---HRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~~lV 911 (1133)
.|+..++||+|+||.||+|.+ .+++.||+|.+.... ...+.+.+|++++++++ |||++++++++... ...++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~-~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG-PRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC-CEEEEE
Confidence 477888999999999999976 468999999986432 23467889999999997 99999999998765 455899
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+++++|.++++.. .+++.....++.|++.|++|||+.||+||||+|+||+++.++.++++|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~------~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 81 MEYAEGGSVRTLMKAG------PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred EecCCCCcHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 9999999999998642 3789999999999999999999999999999999999999999999999998755332
Q ss_pred CCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
. .......|+..|+|||.+.++ .++.++|||||||++|+|++|+.||...........+ ..... +.+
T Consensus 155 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~----~~~~~-----~~~ 222 (277)
T cd06917 155 S---SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI----PKSKP-----PRL 222 (277)
T ss_pred c---cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc----ccCCC-----CCC
Confidence 2 222334688899999998654 4689999999999999999999999654332211111 11111 111
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ... .. ....+++.+||+.||++||++.|++++
T Consensus 223 ~---~~~--~~--~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 223 E---DNG--YS--KLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred C---ccc--CC--HHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0 000 00 112378899999999999999999864
No 321
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.98 E-value=6e-32 Score=302.12 Aligned_cols=263 Identities=22% Similarity=0.350 Sum_probs=194.0
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|+..+.||+|++|.||+|+.. +|+.||||++..... ..+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-CcEEEEee
Confidence 4788899999999999999775 689999999864332 235788999999999999999999998765 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+. ++|.+++.... ...+++..+..++.|++.|++|||+.+++||||+|+||+++.++.++++|||+++.....
T Consensus 80 ~~~-~~l~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~-- 153 (284)
T cd07860 80 FLH-QDLKKFMDASP---LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-- 153 (284)
T ss_pred ccc-cCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC--
Confidence 995 68988887543 234889999999999999999999999999999999999999999999999998644221
Q ss_pred CCCCCCCCCCCCCccCccccCCCC-CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
........++..|+|||++.+.. ++.++|||||||++|||+||+.||...+..+....+.+..... .....+....
T Consensus 154 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 230 (284)
T cd07860 154 -VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP--DEVVWPGVTS 230 (284)
T ss_pred -ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCC--ChhhhhhhhH
Confidence 11223335678999999886644 5889999999999999999999997655443332222221111 0000000000
Q ss_pred -------CCC-CChhHHH----H-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1073 -------LDP-ESSEWEE----F-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1073 -------~~~-~~~~~~~----~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+.. ....... + ....+++.+|++.||++||+++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 231 LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000 0000000 0 112378999999999999999999854
No 322
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=3.5e-32 Score=254.97 Aligned_cols=264 Identities=22% Similarity=0.357 Sum_probs=200.3
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|.-.++||+|.||+||+|+.+ +++.||+|+++-+..+ .....+|+-+++.++|+|||++++....+ ...-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd-kkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-KKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC-ceeEEeHH
Confidence 5677789999999999999765 5899999999754433 45788999999999999999999988765 34479999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|| ..+|..+.... +..++.+....++.|+++|+.++|++++.|||+||.|.+++.+|..|++|||+++...-
T Consensus 82 ~c-dqdlkkyfdsl----ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi--- 153 (292)
T KOG0662|consen 82 FC-DQDLKKYFDSL----NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI--- 153 (292)
T ss_pred Hh-hHHHHHHHHhc----CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC---
Confidence 99 45677766543 23488888899999999999999999999999999999999999999999999975422
Q ss_pred CCCCCCCCCCCCCccCccccCCCC-CCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhc------ccccc
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQ-PTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRG------QISEL 1065 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~------~~~~~ 1065 (1133)
........+.|.+|++|+++.+.+ |+...|+||.|||+.|+.. |++-|.+.+.++....+-+..... .+...
T Consensus 154 pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 112223456789999999998765 7889999999999999988 666666666555555544433221 11222
Q ss_pred ccCCcCCCCCCChhHHHHHHhH-----hhhhccCCCCCCCCCCHHHHHHH
Q 001171 1066 LEPGLLELDPESSEWEEFLLGV-----KVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~-----~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.|-......+..-.|......+ ++..+.+.-+|..|.++++.+++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 2222222233444555554433 67788888899999999988754
No 323
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.98 E-value=1.4e-31 Score=303.71 Aligned_cols=254 Identities=24% Similarity=0.396 Sum_probs=196.6
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.|+..+.||+|+||.||+|... ++..||+|++..... ....+.+|++++++++|||++++++++.... ..++||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 104 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-TAWLVM 104 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-eEEEEE
Confidence 4778889999999999999764 689999999864322 1246788999999999999999999998764 458999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||++ |++.+.+.... ..+++..+..++.+++.|+.|||+.+|+||||+|+||+++.++.++++|||++.....
T Consensus 105 e~~~-g~l~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-- 177 (317)
T cd06635 105 EYCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-- 177 (317)
T ss_pred eCCC-CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC--
Confidence 9996 57887776432 3388999999999999999999999999999999999999999999999998754321
Q ss_pred CCCCCCCCCCCCCCccCccccC---CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAAS---TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.....|+..|+|||++. ++.++.++|||||||++|||++|+.||...........+..... ....
T Consensus 178 -----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~----~~~~--- 245 (317)
T cd06635 178 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES----PTLQ--- 245 (317)
T ss_pred -----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC----CCCC---
Confidence 22346888999999973 45688999999999999999999999976544333332222110 0000
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCCCC
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDM 1120 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~~~ 1120 (1133)
...+... ..+++.+|++.+|.+||++.+++++.......+..
T Consensus 246 -------~~~~~~~--l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 287 (317)
T cd06635 246 -------SNEWSDY--FRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPET 287 (317)
T ss_pred -------CccccHH--HHHHHHHHccCCcccCcCHHHHHhChhhhccCccc
Confidence 0011111 23788999999999999999999987765554443
No 324
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.98 E-value=9.6e-32 Score=296.99 Aligned_cols=251 Identities=23% Similarity=0.404 Sum_probs=198.6
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
+|++.+.||+|++|.||+|..+ +++.|++|++..... ..+.+.+|++++++++|||++++++++... ...++||||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~lv~e~ 80 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE-GEISIVLEY 80 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-CeEEEEEEe
Confidence 5888999999999999999876 489999999875543 356789999999999999999999999876 455999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
+++++|.+++... ..+++..+..++.|+++|++|+|+ .+++||||+|+||+++.++.++++|||.+........
T Consensus 81 ~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999864 347899999999999999999999 9999999999999999999999999999865432211
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||.........+.+.... ....... +...
T Consensus 156 ---~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~--- 227 (264)
T cd06623 156 ---QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSL-PAEE--- 227 (264)
T ss_pred ---cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCC-Cccc---
Confidence 1123457889999999988889999999999999999999999996553212222222211 1111111 1000
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. ....+++.+|+..+|++||++.|++++
T Consensus 228 ------~~--~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 228 ------FS--PEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ------CC--HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00 112278889999999999999999874
No 325
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.98 E-value=9.3e-32 Score=299.27 Aligned_cols=246 Identities=22% Similarity=0.335 Sum_probs=194.6
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
-|++.+.||+|+||.||+|... +++.||+|....... ..+.+.+|++++++++||||+++++++... ...++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-TKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC-CeEEEEEEe
Confidence 4778889999999999999764 689999998754332 235788999999999999999999999876 455999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+++++|.+++.. ..+++..+..++.+++.|+.|||+.|++|+||||+||+++.++.++++|||++.......
T Consensus 84 ~~~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 84 LGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 999999999864 237899999999999999999999999999999999999999999999999986542211
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......++..|+|||.+.+..++.++||||+||++|+|++|..||...........+. ....+. ++...
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~-~~~~~---- 225 (277)
T cd06641 156 -IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP----KNNPPT-LEGNY---- 225 (277)
T ss_pred -hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh----cCCCCC-CCccc----
Confidence 11223467889999999988888999999999999999999999996544333222221 111110 11000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. ....+++.+|++.+|.+||++.+++++
T Consensus 226 --~------~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 226 --S------KPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred --C------HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0 112378889999999999999999985
No 326
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=2.4e-32 Score=300.67 Aligned_cols=246 Identities=19% Similarity=0.290 Sum_probs=194.6
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
+|++.++||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||+++++++.+. ...++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE-ENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC-CeEEEEE
Confidence 4788999999999999999875 58999999986432 2346788999999999999999999988765 4559999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++++|.+++... ..+++.....++.|+++|+.|||+.+++|+||||+||++++++.++++|||.+.......
T Consensus 80 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 80 DLLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred eCCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 999999999999764 237888999999999999999999999999999999999999999999999986542211
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
......|+..|+|||++.+..++.++|+||+|+++|+|++|+.||....... ...+.+.... ......+..
T Consensus 155 ----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~--~~~~~~~~~-- 225 (258)
T cd05578 155 ----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI-RDQIRAKQET--ADVLYPATW-- 225 (258)
T ss_pred ----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH-HHHHHHHhcc--ccccCcccC--
Confidence 2234568889999999988889999999999999999999999997655431 1222221111 000111110
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCCH--HHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSM--ADIV 1108 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~--~evl 1108 (1133)
. ....+++.+||+.||.+||++ +|++
T Consensus 226 --------~--~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 226 --------S--TEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --------c--HHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0 122378899999999999999 6654
No 327
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=9.2e-32 Score=296.77 Aligned_cols=241 Identities=20% Similarity=0.290 Sum_probs=188.2
Q ss_pred cccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCC
Q 001171 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGN 919 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gs 919 (1133)
||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++||||+++++++.++. ..++||||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK-YIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC-ccEEEEecCCCCc
Confidence 699999999999875 489999999864332 2467889999999999999999999987664 4599999999999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCC
Q 001171 920 LATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999 (1133)
Q Consensus 920 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 999 (1133)
|.+++.+.. .+++..+..++.||+.|++|+|+.+++|+||+|+||+++.++.++++|||.++...... ...
T Consensus 80 L~~~l~~~~-----~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----~~~ 150 (262)
T cd05572 80 LWTILRDRG-----LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----KTW 150 (262)
T ss_pred HHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----ccc
Confidence 999997642 37888999999999999999999999999999999999999999999999986543221 223
Q ss_pred CCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1000 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
...++..|+|||.+.+..++.++|+||+|+++|+|++|..||.....+. .....+........ ..+...
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~-- 219 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-MEIYNDILKGNGKL--------EFPNYI-- 219 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-HHHHHHHhccCCCC--------CCCccc--
Confidence 3467889999999988889999999999999999999999997554211 11222211101000 000010
Q ss_pred HHHHHHhHhhhhccCCCCCCCCCC-----HHHHHH
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRPS-----MADIVF 1109 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~ 1109 (1133)
.....+++.+||+.+|++||+ ++|+++
T Consensus 220 ---~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 220 ---DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ---CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 011237889999999999999 777765
No 328
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-32 Score=273.36 Aligned_cols=247 Identities=21% Similarity=0.370 Sum_probs=185.2
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC--HHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID--ENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
.+....||.|+.|+||+++++ .|..+|||.+...... .+++...++++.+- +.|.||+.+|||....+. ++.||.
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV-~IcMel 172 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV-FICMEL 172 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH-HHHHHH
Confidence 445677999999999999887 4899999999764432 35666677776555 489999999999877565 799999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
| ......++++.. ..+++...-++...++.||.||.+ ++|+|||+||+|||+|+.|.+|+||||.+-+..+...
T Consensus 173 M-s~C~ekLlkrik----~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 173 M-STCAEKLLKRIK----GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred H-HHHHHHHHHHhc----CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc
Confidence 8 445566666543 338888888899999999999974 5799999999999999999999999999866544322
Q ss_pred CCCCCCCCCCCCCccCccccCC---CCCCCCCchhHHHHHHHHHHhCCCCCccCC-hhhHHHHHHHHhhhccccccccCC
Q 001171 994 EASSSTTPIGSLGYVSPEAAST---GQPTKEADVYSFGIVLLEILTGRKPVMFTQ-DEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~el~tg~~Pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.+...|.+.|||||.+.- ..|+.++||||||++++|+.||+.||..-+ +-++...+.. . . .|.
T Consensus 248 ----htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln---~-e-----PP~ 314 (391)
T KOG0983|consen 248 ----HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN---E-E-----PPL 314 (391)
T ss_pred ----cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh---c-C-----CCC
Confidence 234568899999999854 468999999999999999999999997532 2233333322 1 1 112
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+.....-..++. +++..|+.+|+.+||...+++++
T Consensus 315 L~~~~gFSp~F~------~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 315 LPGHMGFSPDFQ------SFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCcccCcCHHHH------HHHHHHhhcCcccCcchHHHhcC
Confidence 211111223333 45556999999999999999864
No 329
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.98 E-value=1.5e-31 Score=293.14 Aligned_cols=249 Identities=24% Similarity=0.393 Sum_probs=199.1
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
+|+..+.||+|++|.||+|..+ +++.+++|++..... ..+.+.+|++++++++||+++++++++... ...++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK-DELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEecC
Confidence 4778899999999999999875 688999999976543 457889999999999999999999998876 4559999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++.... ..+++..+..++.+++.|++|||+.|++||||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 80 SGGSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCCcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 9999999987642 3489999999999999999999999999999999999999999999999999865432211
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.......... ..........
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~------ 221 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT----NGPPGLRNPE------ 221 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----cCCCCcCccc------
Confidence 2345688899999999888899999999999999999999999976543332222211 1111111110
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+. ....+++.+|++.||++||++.|++++
T Consensus 222 ---~~~--~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 222 ---KWS--DEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ---ccC--HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 001 112378899999999999999999864
No 330
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.98 E-value=7.1e-32 Score=302.50 Aligned_cols=248 Identities=20% Similarity=0.320 Sum_probs=195.3
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccC-CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG-TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
++|.+.+.||+|+||.||+|... ++..||+|.+... ....+.+.+|+.++++++|||++++++++.... ..++|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD-ELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC-cEEEEEec
Confidence 57899999999999999999764 6788999998543 223467889999999999999999999987764 45999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+++++|.+++.+. .+++..+..++.|++.|++|||++|++||||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~-- 169 (293)
T cd06647 98 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 169 (293)
T ss_pred CCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc--
Confidence 9999999998752 36788999999999999999999999999999999999999999999999876443221
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......|++.|+|||.+.+..++.++|||||||++|++++|+.||...........+.. .+ .+. . .
T Consensus 170 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~---~~-~~~-----~---~ 236 (293)
T cd06647 170 -SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT---NG-TPE-----L---Q 236 (293)
T ss_pred -cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc---CC-CCC-----C---C
Confidence 122334688899999999888899999999999999999999999965443221111110 00 000 0 0
Q ss_pred CCChhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1075 PESSEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1075 ~~~~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
....+ ....+++.+||+.+|++||++.+++.+
T Consensus 237 ----~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 ----NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ----CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011 112278899999999999999999976
No 331
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.98 E-value=1.5e-31 Score=303.08 Aligned_cols=269 Identities=19% Similarity=0.238 Sum_probs=196.8
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCC-----
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPP----- 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 905 (1133)
..++|++.+.||+|+||.||+|..+ +++.||||++...... ...+.+|++++++++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3457999999999999999999775 5899999998643221 335678999999999999999999886532
Q ss_pred --CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccC
Q 001171 906 --DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG 983 (1133)
Q Consensus 906 --~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 983 (1133)
...++||||+. +++.+++.... ..+++..+..++.||+.|++|||++|++|+||||+||+++.++.+|++|||
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKN----VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCC
Confidence 23489999995 58888876532 248899999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCC-CCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc
Q 001171 984 LDRLAIATPAE-ASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061 (1133)
Q Consensus 984 ~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 1061 (1133)
++......... ........++..|+|||.+.+. .++.++||||+|+++|||++|+.||...........+.+....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~-- 242 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGS-- 242 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC--
Confidence 98755332221 1122344678899999988654 3688999999999999999999999766554444433332211
Q ss_pred ccccccCCcC--------CCCCCCh-hH-------HHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1062 ISELLEPGLL--------ELDPESS-EW-------EEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1062 ~~~~~~~~~~--------~~~~~~~-~~-------~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
++....+... ....... .. .......+++.+|+..||++||+++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 1100000000 0000000 00 001122379999999999999999999864
No 332
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.98 E-value=1.6e-31 Score=299.70 Aligned_cols=267 Identities=21% Similarity=0.313 Sum_probs=191.5
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
++.+|.+.+.||+|+||.||+|..+ +|..||+|++...... ...+.+|++++++++|+||+++++++... ...++|
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTK-ETLTFV 81 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC-CeEEEE
Confidence 3467999999999999999999764 6889999998643322 34678899999999999999999998865 456899
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+. +++.+++.... ..+++..+..++.||+.||+|||+.+|+||||||+||+++.++.++|+|||+++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 82 FEYMH-TDLAQYMIQHP----GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred Eeccc-CCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 99995 77877765432 23677888889999999999999999999999999999999999999999998643221
Q ss_pred CCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChh-hHHHHHHHHhhhc---------
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDE-DIVKWVKKQLQRG--------- 1060 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~-~~~~~~~~~~~~~--------- 1060 (1133)
. .......++..|+|||++.+. .++.++||||+||++|||++|+.||...... +....+.......
T Consensus 157 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 157 S---QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred C---CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 1 112234578899999998654 4788999999999999999999999754332 1111111111000
Q ss_pred cccccccCCcCCCCCCC-----hhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1061 QISELLEPGLLELDPES-----SEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
..+...........+.. .....-....+++.+|+..||++|||+.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 00000000000000000 000001122378999999999999999999753
No 333
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.98 E-value=4.9e-32 Score=283.25 Aligned_cols=267 Identities=21% Similarity=0.293 Sum_probs=215.9
Q ss_pred HHHHHHhcCCCcccccccccceeEEEEEECC------ceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEE
Q 001171 830 VETLEATRQFDEENVLSRGRYGLIFKASYQD------GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYY 901 (1133)
Q Consensus 830 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~ 901 (1133)
.+......+++...++-+|.||.||+|.|++ .+.|-+|.+++.... ...+.+|.-.+..+.|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 3444556678889999999999999997753 355677777654433 45678899999999999999999999
Q ss_pred eCCCCcEEEEEeccCCCCHHHHHHhhcc---CCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceE
Q 001171 902 AGPPDVRLLVYDYMPNGNLATLLQEASH---QDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978 (1133)
Q Consensus 902 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 978 (1133)
.+.....++++.++.-|+|..++...+. ...+.++-.+...++.|++.|++|||++||||.||.++|.+||+..++|
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVk 436 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVK 436 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEE
Confidence 8877778999999999999999984432 1224566777888999999999999999999999999999999999999
Q ss_pred EeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHh
Q 001171 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQL 1057 (1133)
Q Consensus 979 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~ 1057 (1133)
++|=.++|...+.... .-.........||+||.+....|+.++|||||||++|||+| |+.||...++.++..+++++.
T Consensus 437 ltDsaLSRDLFP~DYh-cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy 515 (563)
T KOG1024|consen 437 LTDSALSRDLFPGDYH-CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY 515 (563)
T ss_pred eccchhccccCccccc-ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc
Confidence 9999999877654322 22223345568999999999999999999999999999999 999999999999999888876
Q ss_pred hhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1058 QRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
+-.+.-.-. + +- ..++.-||..+|++||+++|++..|.++
T Consensus 516 RlaQP~NCP-----------D--eL----f~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 516 RLAQPFNCP-----------D--EL----FTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred eecCCCCCc-----------H--HH----HHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 554322111 1 11 2456679999999999999999999765
No 334
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.98 E-value=9.1e-32 Score=295.91 Aligned_cols=249 Identities=22% Similarity=0.319 Sum_probs=195.1
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccC---CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG---TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.+.||+|+||.||+|..+ +|..||+|.+... ....+.+.+|++++++++|||++++++++... ...++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~-~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN-GRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-CeEEEEEe
Confidence 4788999999999999999775 5888999998643 22356788999999999999999999988775 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCc-eEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFE-AHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~~~ 992 (1133)
|+++++|.+++..... ..+++..+..++.|+++|++|||+.+++|+||||+||++++++. ++++|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 80 YCDGGDLMKRINRQRG---VLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred cCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 9999999999976332 34789999999999999999999999999999999999998864 6999999886543211
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.......|++.|+|||+..+..++.++|||||||++|||++|+.||.......... +.. .......
T Consensus 157 ---~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~-~~~~~~~------- 222 (257)
T cd08225 157 ---ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL---KIC-QGYFAPI------- 222 (257)
T ss_pred ---ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH---HHh-cccCCCC-------
Confidence 11223468889999999988889999999999999999999999996544333222 211 1111111
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+... ....+++.+|+..+|++||++.|++++
T Consensus 223 -~~~~~-----~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 223 -SPNFS-----RDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred -CCCCC-----HHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 01000 112378889999999999999999864
No 335
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.98 E-value=1.1e-31 Score=306.94 Aligned_cols=282 Identities=20% Similarity=0.282 Sum_probs=209.2
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC----CcEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPP----DVRL 909 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~~ 909 (1133)
+|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++.... ...+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999875 48999999986532 23467889999999999999999999887653 3568
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||++ ++|.+++.... .+++..+..++.+++.|++|||+.||+||||||+||+++.++.++++|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-----~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-----PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 58888886532 48899999999999999999999999999999999999999999999999987654
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccc---
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISEL--- 1065 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--- 1065 (1133)
.............++..|+|||++.+. .++.++|+||+|+++|+|++|+.||......+....+............
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 332111123345678899999999877 7899999999999999999999999876665544444332211110000
Q ss_pred ccCCcCCC----CC-CChhHHH----H-HHhHhhhhccCCCCCCCCCCHHHHHHH--HhcCcCCCCCCCCCC
Q 001171 1066 LEPGLLEL----DP-ESSEWEE----F-LLGVKVGLLCTAPDPLDRPSMADIVFM--LEGCRVGPDMPSSAD 1125 (1133)
Q Consensus 1066 ~~~~~~~~----~~-~~~~~~~----~-~~~~~li~~Cl~~dP~~RPs~~evl~~--Le~~~~~~~~~~~~~ 1125 (1133)
........ .. ....+.. + ....+++.+||+.+|++||++.+++++ ++......+.+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~~~~~ 306 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKP 306 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCCCCCC
Confidence 00000000 00 0000110 1 122379999999999999999999986 666666555444333
No 336
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.98 E-value=1.8e-31 Score=298.12 Aligned_cols=248 Identities=20% Similarity=0.316 Sum_probs=194.0
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.|...++||+|++|.||+|... +++.+++|++..... ..+.+.+|+.++++++|||++++++++...+ ..++|+||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~-~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD-ELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC-eEEEEEecc
Confidence 3455678999999999999764 688999998854332 2456889999999999999999999987754 459999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++.. ..+++..+..++.|++.|++|||++||+||||+|+||+++.++.++++|||.+...... .
T Consensus 99 ~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~---~ 169 (285)
T cd06648 99 EGGALTDIVTH------TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE---V 169 (285)
T ss_pred CCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC---C
Confidence 99999999876 22788899999999999999999999999999999999999999999999987643221 1
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDP 1075 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1075 (1133)
.......|+..|+|||+..+..++.++||||+||++|||++|+.||...+.......+... .. +.......
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~----~~-----~~~~~~~~ 240 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN----LP-----PKLKNLHK 240 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc----CC-----CCCccccc
Confidence 1223346889999999998888999999999999999999999999765443333322221 10 11110000
Q ss_pred CChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1076 ESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1076 ~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. ....+++.+||+.+|++||++.|++++
T Consensus 241 ~~------~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 241 VS------PRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred CC------HHHHHHHHHHcccChhhCcCHHHHccC
Confidence 00 112378999999999999999999863
No 337
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.98 E-value=1.1e-31 Score=307.33 Aligned_cols=277 Identities=20% Similarity=0.317 Sum_probs=202.1
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccC---CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC----Cc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG---TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPP----DV 907 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~ 907 (1133)
..+|.+.+.||+|+||+||+|... +++.||||++... ......+.+|++++++++||||+++++++.... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457999999999999999999764 6899999998642 223456778999999999999999999876432 23
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.++||||+. ++|.+++... ..+++..+..++.|++.|+.|||+++++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 589999995 7898888753 2388999999999999999999999999999999999999999999999999875
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccc---
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIS--- 1063 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~--- 1063 (1133)
..... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||...+.......+........-.
T Consensus 158 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 158 TSEKG---DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred cCCCc---ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 43221 12234467889999998864 468899999999999999999999997654433333222221110000
Q ss_pred ccccCCcCC----C----CCC-ChhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH--HhcCcCCCCCC
Q 001171 1064 ELLEPGLLE----L----DPE-SSEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM--LEGCRVGPDMP 1121 (1133)
Q Consensus 1064 ~~~~~~~~~----~----~~~-~~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~--Le~~~~~~~~~ 1121 (1133)
...+....+ . ... ....... ....+++.+|++.||++||+++|++++ ++.+......+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~ 304 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEP 304 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCc
Confidence 000000000 0 000 0000011 122389999999999999999999988 77665554443
No 338
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.98 E-value=2.7e-31 Score=296.60 Aligned_cols=262 Identities=20% Similarity=0.235 Sum_probs=191.7
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhcc-CCCeeeEEEEEeCC-CCcEEEEEe
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVK-HRNLTVLRGYYAGP-PDVRLLVYD 913 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~-~~~~~lV~e 913 (1133)
|++.++||+|+||.||+|... +++.||+|++..... ......+|+.+++++. |||++++++++.+. .+..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 677889999999999999764 689999999875322 2234457899999985 99999999998765 145699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|++ |++.+++.... ..+++..+..++.|++.||+|||+.|++||||||+||+++. +.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~-- 152 (282)
T cd07831 81 LMD-MNLYELIKGRK----RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK-- 152 (282)
T ss_pred cCC-ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC--
Confidence 996 68888876532 34899999999999999999999999999999999999999 99999999998654221
Q ss_pred CCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc--cccccCC-
Q 001171 994 EASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI--SELLEPG- 1069 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~- 1069 (1133)
.......++..|+|||++.+ ..++.++||||+||++|||++|..||...+..+...+.........- .......
T Consensus 153 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 153 --PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred --CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 11223457889999997644 55788999999999999999999999776655554444332211100 0000000
Q ss_pred cC--CCCCCCh----h-HHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LL--ELDPESS----E-WEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~--~~~~~~~----~-~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. ..+.... . .... ....+++.+|++++|++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 0000000 0 0011 222389999999999999999999864
No 339
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=2.7e-31 Score=295.47 Aligned_cols=241 Identities=19% Similarity=0.269 Sum_probs=180.3
Q ss_pred ccccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHHHhh---ccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 844 VLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEALGK---VKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 844 ~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l~~---l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
+||+|+||.||+|... +++.||+|.+...... ...+.+|..+++. .+||+++.+++++...+ ..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD-KLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC-eEEEEEecC
Confidence 4899999999999775 5899999988653321 2234455544443 47999999999887754 458999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++|+|.+++...+ .+++..+..++.|++.|++|||+.+|+||||||+||++++++.++++|||++......
T Consensus 80 ~~~~L~~~i~~~~-----~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---- 150 (279)
T cd05633 80 NGGDLHYHLSQHG-----VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---- 150 (279)
T ss_pred CCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc----
Confidence 9999999887543 3899999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ..+.+.... ....+.+..
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~--~~~~~~~~~---- 222 (279)
T cd05633 151 -KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLT--VNVELPDSF---- 222 (279)
T ss_pred -CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhc--CCcCCcccc----
Confidence 1223468999999999864 5578999999999999999999999964332221 111111110 000010000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
. ....+++.+|+..||++|| +++|++++
T Consensus 223 ------~--~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 223 ------S--PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ------C--HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 0 1122788899999999999 69999886
No 340
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-32 Score=309.21 Aligned_cols=200 Identities=24% Similarity=0.383 Sum_probs=169.6
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccC--CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC-----CcEEE
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG--TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPP-----DVRLL 910 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~~l 910 (1133)
|...+.||+|+||.||+|+++ .|+.||||.+... ....+..-+|++++++++|||||++++.=++.. ...++
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 456688999999999999965 6999999999753 334678889999999999999999988755432 34489
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceee--CCCCc--eEEeccCccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLF--DADFE--AHLSEFGLDR 986 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll--~~~~~--~kl~Dfg~a~ 986 (1133)
|||||.+|||+..+++-... .-+++.+.+.+..+++.||.|||++||+||||||.||++ .++|. .|++|||.||
T Consensus 95 vmEyC~gGsL~~~L~~PEN~--~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENA--YGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EEeecCCCcHHHHhcCcccc--cCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 99999999999999864332 348999999999999999999999999999999999998 33343 5999999998
Q ss_pred ccccCCCCCCCCCCCCCCCCccCccccC-CCCCCCCCchhHHHHHHHHHHhCCCCCccC
Q 001171 987 LAIATPAEASSSTTPIGSLGYVSPEAAS-TGQPTKEADVYSFGIVLLEILTGRKPVMFT 1044 (1133)
Q Consensus 987 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~el~tg~~Pf~~~ 1044 (1133)
...+ .......+||..|.+||+.. .+.|+..+|.|||||++||..||..||...
T Consensus 173 el~d----~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 173 ELDD----NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred cCCC----CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 6633 33567789999999999998 488999999999999999999999999643
No 341
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=1.9e-31 Score=298.63 Aligned_cols=255 Identities=19% Similarity=0.312 Sum_probs=188.8
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|+..++||+|+||.||++.+. +++.||+|++..... ....+.+|+.++.++. ||||+++++++... ...+++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~-~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE-GDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC-CcEEEEEe
Confidence 5667789999999999999775 589999999864332 3457889999999996 99999999988765 44589999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC-CceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|+. +++.++...........+++.....++.+++.|++|||+. +|+||||||+||+++.++.++++|||+++......
T Consensus 84 ~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 84 LMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred ccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 985 5665544322111224588999999999999999999974 99999999999999999999999999986543221
Q ss_pred CCCCCCCCCCCCCCccCccccCCC---CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTG---QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
......|+..|+|||++.+. .++.++||||+||++|||++|+.||.... .....+.+... ...+......
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~-~~~~~~~~~~ 235 (288)
T cd06616 163 ----AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVK-GDPPILSNSE 235 (288)
T ss_pred ----ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcC-CCCCcCCCcC
Confidence 12234578899999998766 68999999999999999999999996443 22222222111 1111110000
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. .... ....+++.+||+.||++||++.||+++
T Consensus 236 ~-------~~~~--~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 236 E-------REFS--PSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred C-------CccC--HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0000 112378999999999999999999875
No 342
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=3.1e-31 Score=296.41 Aligned_cols=266 Identities=21% Similarity=0.321 Sum_probs=197.3
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
+|++.+.||+|++|.||+|..+ +|+.||+|++..... ..+.+.+|++++++++|||++++++++...+ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN-KLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC-cEEEEEec
Confidence 4788999999999999999875 589999999875432 2456778999999999999999999998764 45999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
++ ++|.+++..... ...+++..+..++.||+.|++|||+.|++||||||+||++++++.++++|||+++.....
T Consensus 80 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~--- 153 (284)
T cd07836 80 MD-KDLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP--- 153 (284)
T ss_pred CC-ccHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC---
Confidence 97 588888876432 234899999999999999999999999999999999999999999999999998644221
Q ss_pred CCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc---ccccc-CC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI---SELLE-PG 1069 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~ 1069 (1133)
........++..|+|||++.+. .++.++||||+||++|+|++|+.||...+..+....+........- ..... +.
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence 1112234578899999998654 4688999999999999999999999766655444433332111100 00000 00
Q ss_pred cC-CCCCCC-hhHHH----H-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1070 LL-ELDPES-SEWEE----F-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1070 ~~-~~~~~~-~~~~~----~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+. ..+... ..... . ....+++.+|++.||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 000000 00000 1 122388999999999999999999853
No 343
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=2.9e-31 Score=292.13 Aligned_cols=252 Identities=22% Similarity=0.360 Sum_probs=198.5
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC-CcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPP-DVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~~lV~ 912 (1133)
+|+..+.||+|++|.||+|..+ +++.|++|++.... ...+.+.+|++++++++|||++++++.+.... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999876 68999999986544 23567889999999999999999999987652 4558999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||+++++|.+++.... .+++..+..++.++++|++|||+.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-----KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999998643 48999999999999999999999999999999999999999999999999986553322
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
.. .......++..|+|||...+..++.++||||+|+++|+|++|+.||...+.. ...+.+...........+
T Consensus 156 ~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~----- 227 (260)
T cd06606 156 TG-EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP--MAALYKIGSSGEPPEIPE----- 227 (260)
T ss_pred cc-ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHhccccCCCcCCCc-----
Confidence 11 1123456888999999998888999999999999999999999999755411 111111111011111000
Q ss_pred CCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1073 LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1073 ~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
. . .....+++.+|++.||.+||++.|++++
T Consensus 228 ---~---~--~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 228 ---H---L--SEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ---c---c--CHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 0 0 1112378889999999999999999864
No 344
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=4.9e-31 Score=295.24 Aligned_cols=265 Identities=21% Similarity=0.275 Sum_probs=197.4
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCC-CCcEEEEEe
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGP-PDVRLLVYD 913 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~~lV~e 913 (1133)
|++.+.||+|+||.||+|... +|+.+|+|++.... .....+.+|++++++++|||++++++++... ....++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 667889999999999999876 48999999997542 2235688899999999999999999999765 356699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|++ ++|.+++.... ..+++..+..++.||++|++|||+.|++|+||||+||++++++.++++|||++........
T Consensus 81 ~~~-~~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 996 58888886532 3488999999999999999999999999999999999999999999999999875533221
Q ss_pred CCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc---c--
Q 001171 994 EASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL---E-- 1067 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 1067 (1133)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+.+........... +
T Consensus 156 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 156 --ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred --ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence 12233456788999998754 457899999999999999999999997666554444443322211110000 0
Q ss_pred --CCcCCCCCCChhH----HH--HHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1068 --PGLLELDPESSEW----EE--FLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1068 --~~~~~~~~~~~~~----~~--~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
............. .. -...++++.+|++.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000000000000 01 1223489999999999999999999863
No 345
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=5.1e-31 Score=295.58 Aligned_cols=260 Identities=14% Similarity=0.219 Sum_probs=181.6
Q ss_pred hcCCCcccccccccceeEEEEEECC----ceEEEEEEcccCCcC---H---------HHHHHHHHHHhhccCCCeeeEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD----GMVLSIRRLRDGTID---E---------NTFRKEAEALGKVKHRNLTVLRG 899 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~---~---------~~~~~E~~~l~~l~hpniv~l~~ 899 (1133)
..+|.+.++||+|+||.||+|.+.+ +..+|+|........ + .....+...+..++|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3579999999999999999998754 345566654322111 0 11123334556678999999998
Q ss_pred EEeCCC---CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCc
Q 001171 900 YYAGPP---DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFE 976 (1133)
Q Consensus 900 ~~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~ 976 (1133)
++.... ...++++|++ ..++.+.+.... ..++..+..++.|++.|++|||+.+|+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKL-VENTKEIFKRIK-----CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehh-ccCHHHHHHhhc-----cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCc
Confidence 765432 2346788877 346766665432 2467788899999999999999999999999999999999999
Q ss_pred eEEeccCcccccccCCCC----CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCC-hhhHHH
Q 001171 977 AHLSEFGLDRLAIATPAE----ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQ-DEDIVK 1051 (1133)
Q Consensus 977 ~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~-~~~~~~ 1051 (1133)
++|+|||+|+........ ........||+.|+|||++.+..++.++||||+||++|||++|+.||.... ......
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 999999999765332211 111223469999999999999999999999999999999999999997653 333222
Q ss_pred HHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1052 WVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
......... . ........... .. ..+++..|+..+|++||++.++++.++
T Consensus 245 ~~~~~~~~~----~-~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKCDFIKR----L-HEGKIKIKNAN----KF--IYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHHHHHHH----h-hhhhhccCCCC----HH--HHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 222111000 0 00000111111 11 226788899999999999999998764
No 346
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=3.9e-31 Score=295.43 Aligned_cols=263 Identities=21% Similarity=0.327 Sum_probs=193.5
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
|++.+.||+|++|.||+|.++ +|+.||+|++...... .+.+.+|++++++++|||++++++++... ...++||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-NKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC-CeEEEEEec
Confidence 567889999999999999765 6899999998644322 35688899999999999999999998766 556999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+ +++|.+++..... ..+++..+..++.|+++||+|||+++++||||+|+||+++.++.++++|||.++......
T Consensus 80 ~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-- 153 (283)
T cd07835 80 L-DLDLKKYMDSSPL---TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-- 153 (283)
T ss_pred c-CcCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--
Confidence 9 4789999876432 348899999999999999999999999999999999999999999999999986432211
Q ss_pred CCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc---------ccc
Q 001171 995 ASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ---------ISE 1064 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---------~~~ 1064 (1133)
.......++..|+|||++.+. .++.++||||+|+++|+|++|+.||...+.......+.+...... .++
T Consensus 154 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 154 -RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred -cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchh
Confidence 112233567899999988654 468899999999999999999999976554333222222111000 000
Q ss_pred cccCCcCCCCCCC-hh-HHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 LLEPGLLELDPES-SE-WEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~-~~-~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... ......... .. ...+ ....+++.+|++.||++||+++|++++
T Consensus 233 ~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 233 YKP-TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhh-hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 000000000 00 0000 122379999999999999999999854
No 347
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=7e-31 Score=299.56 Aligned_cols=200 Identities=21% Similarity=0.263 Sum_probs=160.7
Q ss_pred cccccc--cceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRG--RYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
..||+| +||+||+|.+. .|+.||+|.+...... .+.+.+|+.+++.++||||+++++++.... ..++||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS-WLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC-ceEEEEeccc
Confidence 456776 89999999874 6899999998654322 356788999999999999999999998764 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC-
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA- 995 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~- 995 (1133)
++++.+++..... ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 83 YGSANSLLKTYFP---EGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCCHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 9999999987532 237888889999999999999999999999999999999999999999998653222111110
Q ss_pred ---CCCCCCCCCCCccCccccCCC--CCCCCCchhHHHHHHHHHHhCCCCCccCCh
Q 001171 996 ---SSSTTPIGSLGYVSPEAASTG--QPTKEADVYSFGIVLLEILTGRKPVMFTQD 1046 (1133)
Q Consensus 996 ---~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~el~tg~~Pf~~~~~ 1046 (1133)
.......++..|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~ 215 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLR 215 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcCh
Confidence 011122356679999998763 478999999999999999999999975443
No 348
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.8e-31 Score=302.47 Aligned_cols=270 Identities=23% Similarity=0.283 Sum_probs=195.7
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCC------
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPP------ 905 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------ 905 (1133)
.++|++.++||+|+||.||+|.++ +++.||+|++...... ...+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999875 5889999998643322 346788999999999999999998875432
Q ss_pred -CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCc
Q 001171 906 -DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGL 984 (1133)
Q Consensus 906 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 984 (1133)
...++||||+. +++.+.+.... ..+++..+..++.|+++||+|||++||+||||||+||++++++.++++|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPS----VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 23589999995 46777766432 3489999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCC--------CCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHH
Q 001171 985 DRLAIATPAEA--------SSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055 (1133)
Q Consensus 985 a~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~ 1055 (1133)
++......... .......+++.|+|||++.+. .++.++||||+||++|||++|++||...........+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 86543222111 111234578889999987654 578999999999999999999999976665544443333
Q ss_pred Hhhhccc---------cccccCC-cCCCCCCC-hhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1056 QLQRGQI---------SELLEPG-LLELDPES-SEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1056 ~~~~~~~---------~~~~~~~-~~~~~~~~-~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
....... +...+.. ....+... ..+..+ ....+++.+|++.||++||++.|++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 2211100 0000000 00000000 000111 223489999999999999999999753
No 349
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=3.3e-31 Score=294.84 Aligned_cols=243 Identities=21% Similarity=0.276 Sum_probs=186.9
Q ss_pred cccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCC
Q 001171 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGN 919 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gs 919 (1133)
||+|+||+||+|..+ +|+.||+|.+..... ....+.+|++++++++|||++++++++...+ ..++||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD-DLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC-eEEEEEecCCCCc
Confidence 699999999999764 689999999864321 2345678999999999999999999987764 4599999999999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCC
Q 001171 920 LATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999 (1133)
Q Consensus 920 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 999 (1133)
|.+++..... ..+++..+..++.|++.|+.|||+.|++||||+|+||+++.++.++++|||.+..... .....
T Consensus 80 L~~~l~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~----~~~~~ 152 (277)
T cd05577 80 LKYHIYNVGE---PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG----GKKIK 152 (277)
T ss_pred HHHHHHHcCc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc----CCccc
Confidence 9999976542 3488999999999999999999999999999999999999999999999999865422 11223
Q ss_pred CCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1000 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
...++..|+|||++.+..++.++||||+||++|+|++|+.||...........+.+...... . .....
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------~---~~~~~--- 220 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMA------V---EYPDK--- 220 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccccc------c---cCCcc---
Confidence 34678899999999888899999999999999999999999965443222222222111100 0 00000
Q ss_pred HHHHHHhHhhhhccCCCCCCCCC-----CHHHHHH
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRP-----SMADIVF 1109 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~ 1109 (1133)
+.. ...+++.+||+.||++|| ++.+++.
T Consensus 221 ~~~--~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 221 FSP--EAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CCH--HHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 001 112788999999999999 6666764
No 350
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=5.5e-31 Score=297.21 Aligned_cols=269 Identities=21% Similarity=0.301 Sum_probs=198.0
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCC-----
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPP----- 905 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 905 (1133)
..++|++.+.||+|+||.||+|.++ +|+.||+|++..... ....+.+|++++++++|||++++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4568999999999999999999875 588999999864322 2356788999999999999999999886543
Q ss_pred ----CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEec
Q 001171 906 ----DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSE 981 (1133)
Q Consensus 906 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~D 981 (1133)
...++|+||+++ ++.+.+.... ..+++..+..++.||+.||+|||+.||+||||||+||++++++.+|++|
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGL----VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCc
Confidence 356899999975 7777766431 3488999999999999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhc
Q 001171 982 FGLDRLAIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060 (1133)
Q Consensus 982 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 1060 (1133)
||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|++||...+..+....+.+.....
T Consensus 160 fg~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 160 FGLARLYNSEES--RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred ccccccccCCcc--cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 999875433221 11122346778999998864 346889999999999999999999997666555555544433221
Q ss_pred ccc---ccccCC-cCCCCC------C-ChhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1061 QIS---ELLEPG-LLELDP------E-SSEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1061 ~~~---~~~~~~-~~~~~~------~-~~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... +..... ...... . ...+..+ ....+++.+||+.||.+||++.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 000000 000000 0 0000001 122388999999999999999999864
No 351
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=5.7e-31 Score=295.77 Aligned_cols=265 Identities=20% Similarity=0.293 Sum_probs=191.8
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
++|++.+.||+|++|.||+|..+ +|+.||+|++..... ..+.+.+|++++++++|||++++++++... ...++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-KRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC-CeEEEEE
Confidence 46889999999999999999775 689999999864332 235688899999999999999999999876 4559999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC-CCceEEeccCcccccccC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA-DFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~ 991 (1133)
||++ +++.+++..... ...++.....++.||+.||+|||+++|+||||||+||+++. ++.+|++|||++......
T Consensus 81 e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPD---FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred eccc-ccHHHHHHhCCC---CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 9995 688888765322 23577788889999999999999999999999999999985 557899999998643221
Q ss_pred CCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc----
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL---- 1066 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---- 1066 (1133)
........+++.|+|||++.+. .++.++||||+||++|+|++|+.||......+....+....... ..+..
T Consensus 157 ---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 232 (294)
T PLN00009 157 ---VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTP-NEETWPGVT 232 (294)
T ss_pred ---ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC-Chhhccccc
Confidence 1112234578899999988654 57899999999999999999999997655443333322211111 00000
Q ss_pred ---c--CCcCCCCCCChh--HHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1067 ---E--PGLLELDPESSE--WEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1067 ---~--~~~~~~~~~~~~--~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+ ............ ...+ ....+++.+|++.+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000000000000 0000 112378999999999999999999864
No 352
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=4.1e-31 Score=290.04 Aligned_cols=246 Identities=21% Similarity=0.383 Sum_probs=196.1
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.+.||+|++|.||+|... +++.|++|.+..... ..+.+.+|++++++++|||++++++++... ...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS-DSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-CEEEEEEe
Confidence 4788899999999999999765 578999999976543 346788999999999999999999998776 55699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++... ..+++..+..++.|++.|+.|||+.||+||||||+||+++.++.++++|||.+........
T Consensus 80 ~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 80 YAENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred cCCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 99999999999764 2388999999999999999999999999999999999999999999999999875533221
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
......++..|+|||...+..++.++||||+|+++|+|++|+.||............. . ..... +....
T Consensus 155 ---~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~---~-~~~~~-~~~~~--- 223 (254)
T cd06627 155 ---DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV---Q-DDHPP-LPEGI--- 223 (254)
T ss_pred ---cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh---c-cCCCC-CCCCC---
Confidence 1233467889999999988788999999999999999999999997544322222111 1 11110 11000
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
. ....+++.+|+..+|++||++.|++.
T Consensus 224 ---~------~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 224 ---S------PELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ---C------HHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0 11127888999999999999999985
No 353
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-32 Score=321.72 Aligned_cols=255 Identities=24% Similarity=0.299 Sum_probs=198.8
Q ss_pred HHHHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccC----CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCC
Q 001171 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG----TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906 (1133)
Q Consensus 832 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 906 (1133)
.....++|.+.++||+|+||.|..++++ ++++||+|++.+. ..+..-|..|-.+|.--+.+=||+++..|.+. .
T Consensus 70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~-~ 148 (1317)
T KOG0612|consen 70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE-R 148 (1317)
T ss_pred HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc-c
Confidence 3345678999999999999999999886 5899999999752 22346788899999999999999998888775 5
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
+.|+|||||+||+|..++.+.. .+++..+..++..|+-||+-+|+.|+|||||||+|||+|..|++|++|||.+.
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~-----~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD-----RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC-----CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHH
Confidence 6699999999999999998864 38899999999999999999999999999999999999999999999999886
Q ss_pred ccccCCCCCCCCCCCCCCCCccCccccC----C-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc
Q 001171 987 LAIATPAEASSSTTPIGSLGYVSPEAAS----T-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ 1061 (1133)
Q Consensus 987 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 1061 (1133)
..... ....+...+|||.|.+||++. + +.|++.+|.||+||++|||+.|..||...+--+.+..+..-...-.
T Consensus 224 km~~d--G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~ 301 (1317)
T KOG0612|consen 224 KMDAD--GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLS 301 (1317)
T ss_pred hcCCC--CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcC
Confidence 55332 223455678999999999984 3 5789999999999999999999999976554444433332211111
Q ss_pred ccccccCCcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCC---HHHHHHH
Q 001171 1062 ISELLEPGLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPS---MADIVFM 1110 (1133)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs---~~evl~~ 1110 (1133)
+++..+ +...+ ++|.+.+ -+|+.|.. +.++..+
T Consensus 302 FP~~~~---------------VSeeakdLI~~ll-~~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 302 FPDETD---------------VSEEAKDLIEALL-CDREVRLGRNGIEDIKNH 338 (1317)
T ss_pred CCcccc---------------cCHHHHHHHHHHh-cChhhhcccccHHHHHhC
Confidence 221111 11111 4555544 36888877 8888765
No 354
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-33 Score=280.29 Aligned_cols=252 Identities=22% Similarity=0.340 Sum_probs=189.8
Q ss_pred CcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 840 DEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 840 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
+-...||.|+||+|++..++ .|+..|||+++.... +++++..|.+...+- +.||||+++|.+...+. .|+.||.|
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd-cWiCMELM 145 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD-CWICMELM 145 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc-eeeeHHHH
Confidence 34567999999999999775 699999999975443 356788888875554 79999999998876644 49999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
..|++.+.+....-....+++...-.|....+.||+||-+ ..|+|||+||+|||+|..|.+|+||||.+-.....
T Consensus 146 -d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S--- 221 (361)
T KOG1006|consen 146 -DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS--- 221 (361)
T ss_pred -hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH---
Confidence 6788776655433333458888888888889999999975 57999999999999999999999999998654322
Q ss_pred CCCCCCCCCCCCccCccccCC--CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCC
Q 001171 995 ASSSTTPIGSLGYVSPEAAST--GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLE 1072 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1072 (1133)
...+.-.|...|||||.+.. ..|+.++||||+|+++||+.||..||..++. ..+++.+.+.. ..+.+..
T Consensus 222 -iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~g-dpp~l~~----- 292 (361)
T KOG1006|consen 222 -IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIG-DPPILLF----- 292 (361)
T ss_pred -HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcC-CCCeecC-----
Confidence 22334568899999999953 3489999999999999999999999975543 44554444332 2111111
Q ss_pred CCCCChhHHHHH-HhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1073 LDPESSEWEEFL-LGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1073 ~~~~~~~~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
+.+ ..++. ...++|..|+.+|-..||.+.++.+
T Consensus 293 -~~~---~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 293 -DKE---CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred -ccc---ccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 111 11111 2237888899999999999999875
No 355
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=9.6e-31 Score=292.90 Aligned_cols=264 Identities=23% Similarity=0.318 Sum_probs=195.2
Q ss_pred CCcccccccccceeEEEEEECC-ceEEEEEEcccCCcC---HHHHHHHHHHHhhc---cCCCeeeEEEEEeCCCC----c
Q 001171 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTID---ENTFRKEAEALGKV---KHRNLTVLRGYYAGPPD----V 907 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~---~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~----~ 907 (1133)
|++.++||+|+||.||+|.++. ++.||+|++...... ...+.+|+++++++ +|||++++++++...+. .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6778999999999999998864 899999999643222 24566788887776 59999999999876543 2
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.+++|||+. ++|.+++..... ..+++..+..++.|+++||+|||+.+++|+||+|+||+++.++.++++|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~---~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK---PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 589999996 589988876432 2488999999999999999999999999999999999999999999999999865
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc-
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL- 1066 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~- 1066 (1133)
.... .......++..|+|||++.+..++.++|||||||++|||++|+.||......+....+.+...........
T Consensus 157 ~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFE----MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCC----cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCC
Confidence 4221 11223357889999999998889999999999999999999999997666555444443322111000000
Q ss_pred -----cCCcCCCCCC--ChhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1067 -----EPGLLELDPE--SSEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1067 -----~~~~~~~~~~--~~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.......... ....... ....+++.+||+.||.+||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000000 0001111 122389999999999999999999853
No 356
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=4.3e-31 Score=300.68 Aligned_cols=271 Identities=22% Similarity=0.332 Sum_probs=198.6
Q ss_pred HHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEE
Q 001171 834 EATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 834 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~ 909 (1133)
..+++|++.++||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++|||++++++++.......+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 46778999999999999999999765 78999999875422 224678889999999999999999999876556678
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||+ +++|.++++. ..+++.....++.|+++|++|||+.+|+||||||+||+++.++.++++|||.+....
T Consensus 87 lv~e~~-~~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 87 FVTELL-GTDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQD 159 (328)
T ss_pred EEeehh-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccC
Confidence 999998 6789888764 236778888899999999999999999999999999999999999999999986431
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc---cccc
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ---ISEL 1065 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~ 1065 (1133)
. ......++..|+|||++.+ ..++.++||||+||++|+|++|+.||...........+.+...... ....
T Consensus 160 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 160 P------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred C------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 1 1223457889999998765 5689999999999999999999999976554333322222111100 0000
Q ss_pred ccCC-------cCCCC--CCChhHHHH-HHhHhhhhccCCCCCCCCCCHHHHHHH--HhcCcCC
Q 001171 1066 LEPG-------LLELD--PESSEWEEF-LLGVKVGLLCTAPDPLDRPSMADIVFM--LEGCRVG 1117 (1133)
Q Consensus 1066 ~~~~-------~~~~~--~~~~~~~~~-~~~~~li~~Cl~~dP~~RPs~~evl~~--Le~~~~~ 1117 (1133)
.+.. ..... +........ ....+++.+|++.+|++||++.|++.+ ++.....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 0000 00000 000000001 122378999999999999999999876 4443333
No 357
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=5.2e-31 Score=299.12 Aligned_cols=265 Identities=17% Similarity=0.193 Sum_probs=187.2
Q ss_pred CcccccccccceeEEEEEECCceEEEEEEcccC---CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 840 DEENVLSRGRYGLIFKASYQDGMVLSIRRLRDG---TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 840 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
.+++.+|.|+++.||++.. +++.||+|++... ....+.+.+|++++++++||||+++++++.... ..+++|||++
T Consensus 5 ~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~-~~~~~~e~~~ 82 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS-ELYVVSPLMA 82 (314)
T ss_pred hhhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC-eEEEEEeccC
Confidence 3445555565655555544 5899999998654 223467899999999999999999999987764 4599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC--
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE-- 994 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-- 994 (1133)
+|+|.+++..... ..+++.....++.|+++||+|||+++|+||||||+||+++.++.++++|||.+.........
T Consensus 83 ~~~l~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 83 YGSCEDLLKTHFP---EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCCHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 9999999986432 23788889999999999999999999999999999999999999999999988644322111
Q ss_pred --CCCCCCCCCCCCccCccccCC--CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHH-HHHHHHhh----hcccccc
Q 001171 995 --ASSSTTPIGSLGYVSPEAAST--GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV-KWVKKQLQ----RGQISEL 1065 (1133)
Q Consensus 995 --~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~~----~~~~~~~ 1065 (1133)
........++..|+|||++.+ ..++.++||||+||++|||++|+.||......... +.+..... ....+..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 111233457778999999865 35789999999999999999999999754433221 11110000 0000000
Q ss_pred -----------ccCCcCCCCCCChhHHHHH-HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1066 -----------LEPGLLELDPESSEWEEFL-LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1066 -----------~~~~~~~~~~~~~~~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.++... ..........+. ...+++.+||+.||++||++.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 240 EDSMSQSRSSNEHPNNR-DSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCCcCcccccccccchh-hhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000 000000011111 22379999999999999999999965
No 358
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=1.9e-31 Score=294.73 Aligned_cols=247 Identities=23% Similarity=0.396 Sum_probs=193.0
Q ss_pred cccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCC
Q 001171 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGN 919 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gs 919 (1133)
||+|+||.||+|.+. +|+.|++|.+..... ..+.+.+|++++++++|||++++++.+... ...++||||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK-KNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC-cEEEEEEecCCCCc
Confidence 689999999999886 489999999865432 245788899999999999999999888765 45599999999999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC-----
Q 001171 920 LATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE----- 994 (1133)
Q Consensus 920 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----- 994 (1133)
|.+++.+.+ .+++..+..++.||++||+|||+.+++||||+|+||++++++.++++|||++.........
T Consensus 80 L~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 80 LASLLENVG-----SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 999998643 3789999999999999999999999999999999999999999999999998654322110
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
........++..|+|||...+..++.++||||||+++|++++|+.||......+....+... ....+...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~-------- 224 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG--KIEWPEDV-------- 224 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CcCCCccc--------
Confidence 11223446788999999998888999999999999999999999999766655444333221 00000000
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
. . .....+++.+|++.+|++||++.++.+.|+.
T Consensus 225 ~----~--~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 225 E----V--SDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred c----C--CHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 0 0 0112378899999999999999666665543
No 359
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=4.7e-31 Score=290.19 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=200.2
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.+.||+|+||.||++.+. +++.||+|++..... ..+.+.+|++++++++|||++++++.+... ...++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-GKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-CEEEEEEE
Confidence 5788899999999999999775 589999999865432 356788999999999999999999998776 55689999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++..... ....+++..+..++.+++.|++|||+.|++|+||+|+||+++.++.++++|||.+.......
T Consensus 80 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 157 (258)
T cd08215 80 YADGGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV- 157 (258)
T ss_pred ecCCCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc-
Confidence 9999999999987532 12458999999999999999999999999999999999999999999999999986543221
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
.......|++.|+|||...+..++.++||||+|+++|+|++|+.||...+.......... .......
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~------- 224 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK----GQYPPIP------- 224 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc----CCCCCCC-------
Confidence 122334688899999999888899999999999999999999999976554433332211 1111110
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. .. ....+++.+||..+|++||++.|++++
T Consensus 225 -~~---~~--~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 225 -SQ---YS--SELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred -CC---CC--HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 00 112378889999999999999999864
No 360
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=2.3e-31 Score=304.39 Aligned_cols=267 Identities=21% Similarity=0.317 Sum_probs=197.1
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCC---CCcE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGP---PDVR 908 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---~~~~ 908 (1133)
.++|++.++||+|+||.||+|... +|+.||+|++.... ...+.+.+|++++++++||||+++++++... ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 468999999999999999999765 58999999986532 2245677899999999999999999887532 2346
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
++||||+. ++|.+++... ..+++..+..++.||+.||+|||+.+|+||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 89999995 6888888643 23889999999999999999999999999999999999999999999999998654
Q ss_pred ccCCCC-CCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc-----
Q 001171 989 IATPAE-ASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ----- 1061 (1133)
Q Consensus 989 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~----- 1061 (1133)
...... ........|+..|+|||++.+ ..++.++||||+||++|||++|+.||...+.......+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 332221 111234578889999999865 4578999999999999999999999976544333322222211100
Q ss_pred ------ccccccCCcCCCCCCChhHHH----H-HHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1062 ------ISELLEPGLLELDPESSEWEE----F-LLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1062 ------~~~~~~~~~~~~~~~~~~~~~----~-~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
+...... ... .....+.+ . ....+++.+|++.||++||++++++.+-
T Consensus 238 ~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 238 RIGSDRVRKYIQN-LPR--KQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hhchhhHHHHHhh-ccc--CCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 0000000 000 00000111 1 1223799999999999999999999753
No 361
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=3.6e-31 Score=296.35 Aligned_cols=245 Identities=20% Similarity=0.324 Sum_probs=192.6
Q ss_pred cccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCC
Q 001171 841 EENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNG 918 (1133)
Q Consensus 841 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~g 918 (1133)
...+||+|+||.||+|..+ +|+.||+|++..... ....+.+|+.++++++|||++++++++... +..++||||++++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~~~~~ 102 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-DELWVVMEFLEGG 102 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeC-CEEEEEEecCCCC
Confidence 3467999999999999774 689999999854332 345688999999999999999999998876 4559999999999
Q ss_pred CHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCC
Q 001171 919 NLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSS 998 (1133)
Q Consensus 919 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 998 (1133)
+|.+++... .+++.....++.|++.|++|||+.|++||||||+||+++.++.++++|||++....... ...
T Consensus 103 ~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~---~~~ 173 (292)
T cd06657 103 ALTDIVTHT------RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRR 173 (292)
T ss_pred cHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc---ccc
Confidence 999987542 37888999999999999999999999999999999999999999999999876442211 112
Q ss_pred CCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCCh
Q 001171 999 TTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESS 1078 (1133)
Q Consensus 999 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1078 (1133)
....|+..|+|||++.+..++.++||||+||++|+|++|..||...........+..... +..........
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 244 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------PKLKNLHKVSP 244 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC---------cccCCcccCCH
Confidence 334688899999999888889999999999999999999999976555444333322211 11111000111
Q ss_pred hHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1079 EWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1079 ~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
...+++.+|++.||.+||++.|++++
T Consensus 245 ------~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 245 ------SLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred ------HHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 12367889999999999999999874
No 362
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=7.1e-31 Score=290.11 Aligned_cols=246 Identities=20% Similarity=0.258 Sum_probs=185.5
Q ss_pred HHHHhcCCCccccc--ccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCc
Q 001171 832 TLEATRQFDEENVL--SRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 832 ~~~~~~~~~~~~~l--g~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 907 (1133)
.....++|++.+.+ |+|+||.||++..+ ++..+|+|.+....... .|+.....+ +|||++++++++.... .
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~~h~~iv~~~~~~~~~~-~ 83 (267)
T PHA03390 9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMKDNPNFIKLYYSVTTLK-G 83 (267)
T ss_pred HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhhcCCCEEEEEEEEecCC-e
Confidence 34445677787777 99999999999764 67889999986433221 123332222 7999999999998764 5
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC-ceEEeccCccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF-EAHLSEFGLDR 986 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~ 986 (1133)
.++||||+++++|.+++.... .+++..+..++.||++|++|||+.|++||||||+||+++.++ .++++|||.++
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEG-----KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 699999999999999997643 489999999999999999999999999999999999999988 99999999886
Q ss_pred ccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHH-HHHHHHhhhcccccc
Q 001171 987 LAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIV-KWVKKQLQRGQISEL 1065 (1133)
Q Consensus 987 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~ 1065 (1133)
.... .....++..|+|||++.+..++.++||||+||++|||++|+.||.....+... ..+.... ... ...
T Consensus 159 ~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~-~~~ 229 (267)
T PHA03390 159 IIGT-------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK-LPF 229 (267)
T ss_pred ecCC-------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc-CCc
Confidence 4321 12345788999999999888999999999999999999999999754433321 1111111 100 000
Q ss_pred ccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCC-HHHHHH
Q 001171 1066 LEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS-MADIVF 1109 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-~~evl~ 1109 (1133)
.. ... ....+++.+|++.+|.+||+ ++|+++
T Consensus 230 ~~-------~~~------~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 230 IK-------NVS------KNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cc-------ccC------HHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 000 11237888999999999996 688875
No 363
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=4e-31 Score=298.69 Aligned_cols=250 Identities=23% Similarity=0.362 Sum_probs=191.9
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
..|+..+.||+|+||.||+|+.. +++.||+|.+..... ....+.+|+++++.++|||++++++++... ...++|
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv 93 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-HTAWLV 93 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC-CeeEEE
Confidence 34777889999999999999875 578899999864211 134677899999999999999999998876 455999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|||+. |++.+++.... ..+++..+..++.|++.|+.|||+.+++||||||+||+++.++.++++|||++.....
T Consensus 94 ~e~~~-~~l~~~~~~~~----~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~- 167 (308)
T cd06634 94 MEYCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP- 167 (308)
T ss_pred EEccC-CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC-
Confidence 99996 68888776432 2378889999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCCCCCCCCCCCccCccccC---CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAAS---TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEP 1068 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1133)
.....++..|+|||++. ...++.++|||||||++|+|++|+.||......+....+.+. ..+....
T Consensus 168 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~- 236 (308)
T cd06634 168 ------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQS- 236 (308)
T ss_pred ------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc----CCCCcCc-
Confidence 12345788999999974 356788999999999999999999998654433322222111 1111000
Q ss_pred CcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1069 GLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1069 ~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
..+.. ...+++.+||+.+|++||++.+++++-.-..
T Consensus 237 ---------~~~~~--~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 237 ---------GHWSE--YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred ---------ccccH--HHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 00111 1237899999999999999999998755444
No 364
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=6.2e-31 Score=293.77 Aligned_cols=263 Identities=19% Similarity=0.273 Sum_probs=197.0
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
|++.+.||+|++|.||+|... +++.+++|++...... ...+.+|++++++++|||++++++++... ...++||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-GDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC-CCEEEEEec
Confidence 567788999999999999775 6899999998654332 45788899999999999999999998776 455999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
++ +++.+++.... ..+++..+..++.|++.|++|||+.+|+|+||||+||+++.++.++++|||.+.......
T Consensus 80 ~~-~~l~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-- 152 (283)
T cd05118 80 MD-TDLYKLIKDRQ----RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-- 152 (283)
T ss_pred cC-CCHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--
Confidence 96 48888887642 348899999999999999999999999999999999999999999999999986553322
Q ss_pred CCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc---ccccc---
Q 001171 995 ASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI---SELLE--- 1067 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 1067 (1133)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...+..+....+......... ....+
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhh
Confidence 112234578899999998776 6899999999999999999999999766654444333332221100 00000
Q ss_pred CC---cCCCCC-C-ChhHHHHH-HhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1068 PG---LLELDP-E-SSEWEEFL-LGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1068 ~~---~~~~~~-~-~~~~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. ...... . ........ ...+++.+||++||.+||++.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 000000 0 00111112 22389999999999999999999863
No 365
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=2.4e-31 Score=292.32 Aligned_cols=249 Identities=21% Similarity=0.331 Sum_probs=199.3
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|++.++||+|+||.||++... +++.+|+|++..... ....+.+|++++++++||||+++++++... ...++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-NKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-CEEEEEeh
Confidence 4788899999999999999664 688999999865332 245677899999999999999999988776 45699999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+++++|.+++.+.... ...+++..++.++.|++.|++|||+.|++||||+|+||+++.++.++++|||+++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKK-RKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--
Confidence 99999999998764322 245889999999999999999999999999999999999999999999999998755332
Q ss_pred CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCC
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLEL 1073 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1133)
......++..|+|||.+.+..++.++|+||+|+++|||++|+.||...+.......+. ........+
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~------ 223 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ----RGKYPPIPP------ 223 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh----cCCCCCCch------
Confidence 2223457889999999998889999999999999999999999997665544333322 111111110
Q ss_pred CCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1074 DPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1074 ~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.. .....+++.+|++.+|++||++.|++++
T Consensus 224 -----~~--~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 224 -----IY--SQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred -----hh--CHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 01 1112378999999999999999999864
No 366
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=5.4e-31 Score=302.34 Aligned_cols=270 Identities=22% Similarity=0.305 Sum_probs=198.8
Q ss_pred cHHHHHHHhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeC
Q 001171 828 TYVETLEATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAG 903 (1133)
Q Consensus 828 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 903 (1133)
...+....+++|++.+.||+|+||.||+|.. .+|+.||+|++..... ..+.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3445667889999999999999999999975 4689999999865322 23567789999999999999999998853
Q ss_pred CC-----CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceE
Q 001171 904 PP-----DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAH 978 (1133)
Q Consensus 904 ~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 978 (1133)
.. ...+++++++ +++|.+++.. ..+++..+..++.|+++|++|||+.||+||||||+||+++.++.++
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEE
Confidence 21 2347888887 7899888764 2378999999999999999999999999999999999999999999
Q ss_pred EeccCcccccccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHh
Q 001171 979 LSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQL 1057 (1133)
Q Consensus 979 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~ 1057 (1133)
++|||+++.... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||...+.......+.+..
T Consensus 161 l~dfg~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (345)
T cd07877 161 ILDFGLARHTDD------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 234 (345)
T ss_pred Eecccccccccc------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 999999864321 1233467889999999865 467889999999999999999999997655444333332221
Q ss_pred hhccccccc----cC-------CcCCCCCCC-hh-H-HHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1058 QRGQISELL----EP-------GLLELDPES-SE-W-EEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1058 ~~~~~~~~~----~~-------~~~~~~~~~-~~-~-~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
... ..+.. +. .....+... .. . ..-....+++.+|++.||.+||++.|++.+=
T Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 235 GTP-GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred CCC-CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 110 00000 00 000000000 00 0 0011223899999999999999999999663
No 367
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=1.2e-30 Score=295.38 Aligned_cols=243 Identities=23% Similarity=0.385 Sum_probs=189.1
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
|...+.||+|+||.||+|... +|+.|++|++..... ..+.+.+|++++++++|||++++++++.+. ...++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE-HTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-CEEEEEEe
Confidence 666788999999999999764 689999999864322 124678899999999999999999999876 45599999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+. |++.+++.... ..+++..+..++.||+.|++|||+.||+||||||+||+++.++.++++|||++...
T Consensus 102 ~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~----- 171 (313)
T cd06633 102 YCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKS----- 171 (313)
T ss_pred cCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCccc-----
Confidence 995 67888776532 34789999999999999999999999999999999999999999999999987532
Q ss_pred CCCCCCCCCCCCCccCccccC---CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 994 EASSSTTPIGSLGYVSPEAAS---TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
.......|+..|+|||++. ...++.++|||||||++|||++|+.||...+.......+... ..+......
T Consensus 172 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~- 244 (313)
T cd06633 172 --SPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----DSPTLQSNE- 244 (313)
T ss_pred --CCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----CCCCCCccc-
Confidence 1122346888999999984 456788999999999999999999999765543333322211 111111100
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+.. ...+++.+|++.+|.+||++.+++.+
T Consensus 245 ---------~~~--~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 245 ---------WTD--SFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ---------cCH--HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 12378889999999999999999965
No 368
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=4.7e-31 Score=302.62 Aligned_cols=268 Identities=18% Similarity=0.285 Sum_probs=191.3
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCC--------
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPP-------- 905 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-------- 905 (1133)
..+|.+.+.||+|+||.||+|... +|+.||+|++..... ..+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999764 589999999864332 3467889999999999999999998765432
Q ss_pred -----CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC-CCceEE
Q 001171 906 -----DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA-DFEAHL 979 (1133)
Q Consensus 906 -----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl 979 (1133)
...++||||++ ++|.+++.. ..+++.....++.||+.|++|||+.||+||||||+||+++. ++.+++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEE
Confidence 23589999996 688888754 23788999999999999999999999999999999999975 557899
Q ss_pred eccCcccccccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhh
Q 001171 980 SEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQ 1058 (1133)
Q Consensus 980 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 1058 (1133)
+|||.++................++..|+|||++.+ ..++.++||||+||++|||++|+.||......+......+...
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 236 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 999998654322111111223457889999998754 4578899999999999999999999975554333322222110
Q ss_pred hcc------ccccccCCcC-CCCCCChhHHH----H-HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1059 RGQ------ISELLEPGLL-ELDPESSEWEE----F-LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1059 ~~~------~~~~~~~~~~-~~~~~~~~~~~----~-~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... .......... ........... . ....+++.+|++.||++||++.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 000 0000000000 00000000000 1 122378999999999999999999854
No 369
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-31 Score=319.59 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=205.0
Q ss_pred hcCCCcccccccccceeEEEEEEC----C----ceEEEEEEcccCCcC--HHHHHHHHHHHhhc-cCCCeeeEEEEEeCC
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ----D----GMVLSIRRLRDGTID--ENTFRKEAEALGKV-KHRNLTVLRGYYAGP 904 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~----~----g~~vavK~~~~~~~~--~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 904 (1133)
.++..+.+.+|+|.||.|++|... . ...||||.++....+ .+.+..|+++|+.+ +||||+.++|+|...
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 344566779999999999999643 1 467999999765443 57899999999999 699999999999884
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhc---------cCCCC--CCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEAS---------HQDGH--VLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA 973 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~ 973 (1133)
...++|+||+..|+|.++++..+ ..... .++......++.|||.|++||++.++|||||.++|||+.+
T Consensus 375 -~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~ 453 (609)
T KOG0200|consen 375 -GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK 453 (609)
T ss_pred -CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC
Confidence 55599999999999999999877 22222 3888999999999999999999999999999999999999
Q ss_pred CCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCC-hhhHHH
Q 001171 974 DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQ-DEDIVK 1051 (1133)
Q Consensus 974 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~-~~~~~~ 1051 (1133)
+..+||+|||+|+................-...|||||.+....|+.++|||||||++||+++ |..||.... ..++.+
T Consensus 454 ~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~ 533 (609)
T KOG0200|consen 454 NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE 533 (609)
T ss_pred CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH
Confidence 999999999999854333222111111113446999999999999999999999999999999 999997644 555555
Q ss_pred HHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1052 WVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
+++++.+.. .++.+.+.+ .+++..||+.+|++||++.|+++.++..
T Consensus 534 ~l~~G~r~~-~P~~c~~ei----------------Y~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 534 FLKEGNRME-QPEHCSDEI----------------YDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHhcCCCCC-CCCCCCHHH----------------HHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 554433221 111111111 1678899999999999999999999884
No 370
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=8.1e-31 Score=300.63 Aligned_cols=266 Identities=21% Similarity=0.275 Sum_probs=195.9
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCC-----C
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPP-----D 906 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~ 906 (1133)
..+|.+.+.||+|+||.||+|... +|+.||+|++..... ....+.+|++++++++||||+++++++.... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 468999999999999999999764 689999999864322 2356788999999999999999999886432 2
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
..++|+||+. .++.++.. ..+++..+..++.|++.|++|||+.+|+||||||+||+++.++.++++|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 3489999995 46766542 237889999999999999999999999999999999999999999999999986
Q ss_pred ccccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc--cc
Q 001171 987 LAIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ--IS 1063 (1133)
Q Consensus 987 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~--~~ 1063 (1133)
.... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||...+.......+........ +.
T Consensus 166 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07879 166 HADA------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFV 239 (342)
T ss_pred CCCC------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 4321 1223467889999999866 4588999999999999999999999976554433333322111000 00
Q ss_pred ccccC--------CcCCCCCCChhHH----HH-HHhHhhhhccCCCCCCCCCCHHHHHHH--HhcCcCC
Q 001171 1064 ELLEP--------GLLELDPESSEWE----EF-LLGVKVGLLCTAPDPLDRPSMADIVFM--LEGCRVG 1117 (1133)
Q Consensus 1064 ~~~~~--------~~~~~~~~~~~~~----~~-~~~~~li~~Cl~~dP~~RPs~~evl~~--Le~~~~~ 1117 (1133)
+.... ...... ..... .. ....+++.+|++.||++||+++|++++ ++.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 240 QKLEDKAAKSYIKSLPKYP--RKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred HHhcccchHHHHhhcCCcc--cchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 00000 000000 00000 00 122388999999999999999999966 7776653
No 371
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=5e-31 Score=295.26 Aligned_cols=254 Identities=22% Similarity=0.346 Sum_probs=193.1
Q ss_pred CCCcccccccccceeEEEEEEC----CceEEEEEEcccCCc-----CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCc
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ----DGMVLSIRRLRDGTI-----DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~-----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 907 (1133)
+|++.+.||+|+||.||+|... +++.||||.++.... ..+.+.+|+++++++ +||+++++++.+... ..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~-~~ 79 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD-TK 79 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC-CE
Confidence 4778899999999999999653 478899999864321 235678899999999 599999999888765 45
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.++||||+++|+|.+++... ..+++..+..++.|+++||+|||+.+++||||||+||+++.++.++++|||+++.
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEEecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 58999999999999998753 2378888899999999999999999999999999999999999999999999865
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCCCC--CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccc
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQ--PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISEL 1065 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1133)
...... .......|+..|+|||...+.. .+.++||||+|+++|||++|..||...........+.+......
T Consensus 155 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---- 228 (288)
T cd05583 155 FLAEEE--ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK---- 228 (288)
T ss_pred cccccc--cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC----
Confidence 432211 1122345888999999987655 68899999999999999999999964332222222222211110
Q ss_pred ccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1066 LEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
+.. ... .. ....+++.+||+.||++||++.++.+.|+.
T Consensus 229 --~~~---~~~---~~--~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 --PPF---PKT---MS--AEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred --CCC---Ccc---cC--HHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 000 000 00 112378889999999999998888777665
No 372
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=2.8e-31 Score=296.10 Aligned_cols=250 Identities=20% Similarity=0.339 Sum_probs=197.0
Q ss_pred cCCCcccccccccceeEEEEEEC-CceEEEEEEcccCC----cCHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEE
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT----IDENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~l 910 (1133)
++|.+.+.||+|+||.||+|..+ +|+.||+|++.... ...+.+.+|++++++++ ||||+++++++... ...++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-~~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE-ENLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-ceEEE
Confidence 36889999999999999999775 68999999986522 22456888999999998 99999999988765 45599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++++|.+++.+.+ .+++..+..++.|++.|++|||+.|++|+||+|+||+++.++.++++|||++.....
T Consensus 80 v~e~~~~~~L~~~l~~~~-----~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 80 VLEYAPNGELLQYIRKYG-----SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EEcCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 999999999999998643 489999999999999999999999999999999999999999999999999865433
Q ss_pred CCCC-----------------CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHH
Q 001171 991 TPAE-----------------ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWV 1053 (1133)
Q Consensus 991 ~~~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~ 1053 (1133)
.... ........++..|+|||+..+..++.++||||+|+++|++++|+.||...........+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 234 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI 234 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence 2211 01223346788999999998888999999999999999999999999765533332222
Q ss_pred HHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCH----HHHHHH
Q 001171 1054 KKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSM----ADIVFM 1110 (1133)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~----~evl~~ 1110 (1133)
... ...++. .+ . ....+++.+|++.+|.+||++ .|++++
T Consensus 235 ~~~--~~~~~~----~~----------~--~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 235 LKL--EYSFPP----NF----------P--PDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred Hhc--CCCCCC----cc----------C--HHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 210 000110 00 0 112378899999999999999 777653
No 373
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=8.9e-31 Score=288.57 Aligned_cols=242 Identities=21% Similarity=0.287 Sum_probs=183.6
Q ss_pred cccccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHHH-hhccCCCeeeEEEEEeCCCCcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEAL-GKVKHRNLTVLRGYYAGPPDVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l-~~l~hpniv~l~~~~~~~~~~~~lV~e~~~ 916 (1133)
+.||+|+||.||+|... +|+.||+|.+...... ...+..|..++ ...+|||++++++++... +..++||||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK-DYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC-CeEEEEEeccC
Confidence 56999999999999774 5899999998653321 22344555544 445899999999999875 45599999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCC
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEAS 996 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 996 (1133)
+++|.++++... .+++..+..++.||+.||.|||+.+++||||+|+||+++.++.++++|||+++....
T Consensus 81 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 81 GGDCASLIKTLG-----GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 999999997643 378889999999999999999999999999999999999999999999998864321
Q ss_pred CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 997 SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 997 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
.....++..|+|||.+.+..++.++||||+|+++|||++|..||...........+.... .......... .
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~ 220 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRR--INWPEEVKEF------C 220 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc--cCCCCccccc------C
Confidence 223457889999999988888999999999999999999999997655544433322110 0000000000 0
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
. ....+++.+||+.+|++||++.++.+.|
T Consensus 221 ----~--~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 221 ----S--PEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ----C--HHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 0 1123789999999999999775554443
No 374
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=1.1e-30 Score=299.26 Aligned_cols=267 Identities=22% Similarity=0.298 Sum_probs=195.0
Q ss_pred cCCC-cccccccccceeEEEEEEC-CceEEEEEEcccCCcCH---------------HHHHHHHHHHhhccCCCeeeEEE
Q 001171 837 RQFD-EENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDE---------------NTFRKEAEALGKVKHRNLTVLRG 899 (1133)
Q Consensus 837 ~~~~-~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~---------------~~~~~E~~~l~~l~hpniv~l~~ 899 (1133)
++|. +.+.||+|+||+||+|..+ .++.||+|++....... ..+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4555 4577999999999999765 68999999986432221 24778999999999999999999
Q ss_pred EEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEE
Q 001171 900 YYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHL 979 (1133)
Q Consensus 900 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl 979 (1133)
++... +..++||||+. |+|.+++... ..+++.....++.|++.|++|||+.||+||||||+||+++.++.+++
T Consensus 88 ~~~~~-~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEG-DFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecC-CcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEE
Confidence 98766 45699999996 6899988653 23788999999999999999999999999999999999999999999
Q ss_pred eccCcccccccCCC-----------CCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChh
Q 001171 980 SEFGLDRLAIATPA-----------EASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDE 1047 (1133)
Q Consensus 980 ~Dfg~a~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~ 1047 (1133)
+|||.++....... .........++..|+|||++.+. .++.++||||+||++|||++|+.||...+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999865431110 01111223467889999998764 4689999999999999999999999876665
Q ss_pred hHHHHHHHHhhhcccccccc----CCcCCCCC-CChhHHH-----HHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1048 DIVKWVKKQLQRGQISELLE----PGLLELDP-ESSEWEE-----FLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+....+.............. +....... ....... -....+++.+|++.+|++||+++|++.+
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 55544444322211100000 00000000 0000000 0122388999999999999999999974
No 375
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=8.5e-31 Score=293.71 Aligned_cols=251 Identities=23% Similarity=0.375 Sum_probs=190.3
Q ss_pred CCCcccccccccceeEEEEEE----CCceEEEEEEcccCCc-----CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCc
Q 001171 838 QFDEENVLSRGRYGLIFKASY----QDGMVLSIRRLRDGTI-----DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~-----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 907 (1133)
.|++.+.||+|+||.||+|.. .+|..||+|++..... ..+.+.+|+++++++ +|++|+.+++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~ 79 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD-TK 79 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC-Ce
Confidence 478889999999999999976 3688999999864321 235678899999999 599999999888765 45
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.++||||+++++|.+++.... .+++.....++.|++.||+|||+.|++||||||+||+++.++.++|+|||+++.
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 80 LHLILDYINGGELFTHLSQRE-----RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 589999999999999997632 377888888999999999999999999999999999999999999999999865
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCCC--CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccccc
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAASTG--QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISEL 1065 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1133)
..... ........|+..|+|||.+.+. .++.++||||+|+++|+|++|+.||...........+.+......
T Consensus 155 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~---- 228 (290)
T cd05613 155 FHEDE--VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE---- 228 (290)
T ss_pred ccccc--ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC----
Confidence 42211 1122235688899999998653 467899999999999999999999964333222222222211110
Q ss_pred ccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1066 LEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
+.. +.. .. ....+++.+|++.||++|| ++.+++++
T Consensus 229 --~~~---~~~---~~--~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 229 --PPY---PQE---MS--ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred --CCC---Ccc---CC--HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 000 000 00 1122788899999999997 77777765
No 376
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-32 Score=291.20 Aligned_cols=241 Identities=21% Similarity=0.369 Sum_probs=192.1
Q ss_pred ccccccccceeEEEEEEC-CceEEEEEEcccC---CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 842 ENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG---TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 842 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
.++||+|.||+||-|+++ +|+.||||++.+- ...+..+++|++|++.+.||.||.+...|+.++. .++|||-+ .
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er-vFVVMEKl-~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER-VFVVMEKL-H 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce-EEEEehhh-c
Confidence 589999999999999775 6999999998543 3345789999999999999999999988887754 49999999 5
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC---CCceEEeccCcccccccCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA---DFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
|+..+.+-... ...+++.....+..||+.||.|||-++|+|+||||+|||+.. -.++|+||||+||....
T Consensus 647 GDMLEMILSsE---kgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE---- 719 (888)
T KOG4236|consen 647 GDMLEMILSSE---KGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE---- 719 (888)
T ss_pred chHHHHHHHhh---cccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch----
Confidence 56655554322 234888888889999999999999999999999999999954 35789999999987633
Q ss_pred CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 995 ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
.......+||+.|.|||++..+.|.+.-|+||+|||+|--++|..||.. ++++-+++ +... +.
T Consensus 720 ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQI----QNAa-----------FM 782 (888)
T KOG4236|consen 720 KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQI----QNAA-----------FM 782 (888)
T ss_pred hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHh----hccc-----------cc
Confidence 3344567899999999999999999999999999999999999999953 33433333 2221 11
Q ss_pred CCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHH
Q 001171 1075 PESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIV 1108 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl 1108 (1133)
.....|.++...+ ++|...++..-++|-+.+.-+
T Consensus 783 yPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 783 YPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 2233466665544 899999999999998887665
No 377
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=2e-30 Score=288.49 Aligned_cols=241 Identities=19% Similarity=0.264 Sum_probs=180.8
Q ss_pred ccccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHH---HhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 844 VLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEA---LGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 844 ~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~---l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
+||+|+||.||+|... +++.||+|.+...... ...+..|..+ ++...||+|+.+++++...+ ..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-KLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-EEEEEEecC
Confidence 4899999999999764 5889999998653322 1223444443 44457999999999888764 458999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++|+|.+++... ..+++..+..++.|++.|++|||+.+|+||||||+||+++.++.++++|||+++.....
T Consensus 80 ~g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---- 150 (278)
T cd05606 80 NGGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---- 150 (278)
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc----
Confidence 999999988653 24899999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCC
Q 001171 996 SSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELD 1074 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1133)
......|+..|+|||++.++ .++.++||||+||++|||++|+.||........... .+..... ...+.
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~------~~~~~--- 219 (278)
T cd05606 151 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRMTLTM------AVELP--- 219 (278)
T ss_pred -CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-HHHhhcc------CCCCC---
Confidence 12234689999999998754 588999999999999999999999975432221111 1111100 11110
Q ss_pred CCChhHHHHHHhHhhhhccCCCCCCCCC-----CHHHHHHH
Q 001171 1075 PESSEWEEFLLGVKVGLLCTAPDPLDRP-----SMADIVFM 1110 (1133)
Q Consensus 1075 ~~~~~~~~~~~~~~li~~Cl~~dP~~RP-----s~~evl~~ 1110 (1133)
.. .. ....+++.+|+..+|.+|| ++.|++++
T Consensus 220 ~~---~s--~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 220 DS---FS--PELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred Cc---CC--HHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 00 00 1123788899999999999 99999864
No 378
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.3e-32 Score=284.61 Aligned_cols=264 Identities=17% Similarity=0.235 Sum_probs=201.7
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccC--CC----eeeEEEEEeCCCCc
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKH--RN----LTVLRGYYAGPPDV 907 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--pn----iv~l~~~~~~~~~~ 907 (1133)
.+.+|.+...+|+|.||.|.++.++ .+..||+|+++.-..-.++..-|+++++++.+ |+ +|++.+||+..+.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh- 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH- 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc-
Confidence 3779999999999999999999654 47999999997655455677889999999942 32 6788888877644
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeC---------------
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFD--------------- 972 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~--------------- 972 (1133)
.++|+|.+ |-|+++++..... ..++...++.|++|++++++|||+.+++|.||||+||++.
T Consensus 166 iCivfell-G~S~~dFlk~N~y---~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNY---IPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCc---cccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccc
Confidence 48999998 6799999988655 3489999999999999999999999999999999999982
Q ss_pred -----CCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChh
Q 001171 973 -----ADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDE 1047 (1133)
Q Consensus 973 -----~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~ 1047 (1133)
....++|+|||.|++.... ....+.|..|+|||++.+-.++.++||||+|||++|+++|..-|...++.
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEH------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred eeccCCCcceEEEecCCcceeccC------cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 1345899999998754222 24557888999999999999999999999999999999999999876655
Q ss_pred hHHHHHHHHhhhccccccccCC-----------------------------cCCCCCCChhHHHHHHhHhhhhccCCCCC
Q 001171 1048 DIVKWVKKQLQRGQISELLEPG-----------------------------LLELDPESSEWEEFLLGVKVGLLCTAPDP 1098 (1133)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~li~~Cl~~dP 1098 (1133)
+....+.+.++ +....++... ............+....++++.+|+..||
T Consensus 316 EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 316 EHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 54433333222 1111111111 00000112233444455699999999999
Q ss_pred CCCCCHHHHHHH
Q 001171 1099 LDRPSMADIVFM 1110 (1133)
Q Consensus 1099 ~~RPs~~evl~~ 1110 (1133)
.+|+|+.|++.+
T Consensus 395 ~~RiTl~EAL~H 406 (415)
T KOG0671|consen 395 ARRITLREALSH 406 (415)
T ss_pred cccccHHHHhcC
Confidence 999999999854
No 379
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=1.1e-30 Score=291.77 Aligned_cols=263 Identities=20% Similarity=0.326 Sum_probs=194.8
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCCc--CHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEEEec
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI--DENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
|++.+.||+|+||.||+|... +++.|++|++..... +.....+|++.+++++ |||++++++++... ...++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~-~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN-DELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC-CcEEEEEec
Confidence 667889999999999999875 478999999865433 2334567999999999 99999999998775 556999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
+ +|+|.+++.... ...+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++++|||.+......
T Consensus 80 ~-~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~--- 152 (283)
T cd07830 80 M-EGNLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR--- 152 (283)
T ss_pred C-CCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC---
Confidence 9 889999887643 234899999999999999999999999999999999999999999999999998654221
Q ss_pred CCCCCCCCCCCCccCccccC-CCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc---------cc
Q 001171 995 ASSSTTPIGSLGYVSPEAAS-TGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI---------SE 1064 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---------~~ 1064 (1133)
.......++..|+|||++. ...++.++|+||||+++|||++|+.||......+....+........- ..
T Consensus 153 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 153 -PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred -CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 1123346788999999874 445789999999999999999999999765544443333222111100 00
Q ss_pred cccCCcCCCCCC-ChhH--HHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 LLEPGLLELDPE-SSEW--EEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 ~~~~~~~~~~~~-~~~~--~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
..+......... .... .......+++.+||+.||++||++.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000000 0000 001223489999999999999999999864
No 380
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=9.2e-31 Score=294.24 Aligned_cols=252 Identities=21% Similarity=0.362 Sum_probs=188.6
Q ss_pred hcCCCcccccccccceeEEEEEECC-ceEEEEEEcccCCc--CHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTI--DENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV 911 (1133)
.++|++.+.||+|+||.||+|.++. ++.||||.+..... ....+.+|++++.+.. ||||+++++++.... ..++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~~v 92 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS-DVFIC 92 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC-eEEEE
Confidence 4578899999999999999998864 89999999975432 2345667787777764 999999999998764 45999
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
|||++ +++.+++.... ..+++..+..++.||+.|++|||+ .+|+||||+|+||+++.++.++|+|||++.....
T Consensus 93 ~e~~~-~~l~~l~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 93 MELMS-TCLDKLLKRIQ----GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eeccC-cCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 99984 57777776532 248899999999999999999997 5999999999999999999999999999865422
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCC----CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQ----PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
.. ......++..|+|||++.+.. ++.++||||||+++|||++|+.||...... .+...+..... .....
T Consensus 168 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~-~~~~~ 240 (296)
T cd06618 168 SK----AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTKILQEE-PPSLP 240 (296)
T ss_pred CC----cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHHHhcCC-CCCCC
Confidence 11 122335778999999987554 788999999999999999999999643221 11122211111 00000
Q ss_pred cCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1067 EPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
. . .... ....+++.+||+.||.+||++.+++++-
T Consensus 241 ~--------~-~~~~--~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 241 P--------N-EGFS--PDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred C--------C-CCCC--HHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 0 0 0000 1123788999999999999999998663
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.3e-32 Score=271.55 Aligned_cols=270 Identities=19% Similarity=0.244 Sum_probs=202.0
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCC-------
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGP------- 904 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~------- 904 (1133)
...|+...+||+|.||.||+|+.+ +|+.||+|++..+... .....+|+++++.++|+|++.+++.|...
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 345677789999999999999775 4778899887543221 34567899999999999999998877532
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCc
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGL 984 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 984 (1133)
....|+||++|+. +|..++.... ..++..++.+++.++..||.|+|+..|+|||+||.|+||+.++.+|++|||+
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~----vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRK----VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCcc----ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 2346899999964 7887776532 3478889999999999999999999999999999999999999999999999
Q ss_pred ccccccC-CCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc
Q 001171 985 DRLAIAT-PAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI 1062 (1133)
Q Consensus 985 a~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 1062 (1133)
++.+... .......+.++.|.+|++||.+.+ +.|+++.|||+.|||+.||+||.+-+.+.........+...... +
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs--~ 248 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGS--I 248 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhcc--C
Confidence 9755433 333444567888999999999876 46899999999999999999999888776666555555443221 1
Q ss_pred cccccCCcCCCC-------------------CCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1063 SELLEPGLLELD-------------------PESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1063 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
.....|++..++ .....+.....+++++.+++..||.+|+++++++.+--
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 111222211110 00111111123458999999999999999999987653
No 382
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=281.63 Aligned_cols=211 Identities=24% Similarity=0.415 Sum_probs=177.9
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~ 909 (1133)
..+|.+..+||+|+||.|..|..+ +.+.+|||+++++.. +.+--..|-+++.-- +-|.+++++.+|..- +..|
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm-DRLy 426 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM-DRLY 426 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh-hhee
Confidence 347899999999999999999665 468899999976543 122234466666655 578889998888765 4559
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAI 989 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 989 (1133)
+||||+.||+|--++++.+. +.+..+..+|..||-||-+||++||+.||||.+|||+|.+|++||+|||+++.-.
T Consensus 427 FVMEyvnGGDLMyhiQQ~Gk-----FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVGK-----FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred eEEEEecCchhhhHHHHhcc-----cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 99999999999999998765 6677888999999999999999999999999999999999999999999987432
Q ss_pred cCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHH
Q 001171 990 ATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055 (1133)
Q Consensus 990 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~ 1055 (1133)
.......+.+||+.|+|||++.-..|+..+|.||+||++|||+.|++||++++.+++.+.+.+
T Consensus 502 ---~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e 564 (683)
T KOG0696|consen 502 ---FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME 564 (683)
T ss_pred ---cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 223345678999999999999999999999999999999999999999999988887777655
No 383
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=2.8e-30 Score=296.13 Aligned_cols=264 Identities=21% Similarity=0.297 Sum_probs=193.6
Q ss_pred HHHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC---HHHHHHHHHHHhhccCCCeeeEEEEEeCCCC--
Q 001171 833 LEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID---ENTFRKEAEALGKVKHRNLTVLRGYYAGPPD-- 906 (1133)
Q Consensus 833 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-- 906 (1133)
....++|++.+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 335678999999999999999999754 6899999998543222 3467889999999999999999998865432
Q ss_pred ---cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccC
Q 001171 907 ---VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFG 983 (1133)
Q Consensus 907 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 983 (1133)
..++||||+ +++|.+++.. ..+++..+..++.||++|++|||+.||+||||||+||+++.++.++++|||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 348999999 7799888764 237899999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc-
Q 001171 984 LDRLAIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ- 1061 (1133)
Q Consensus 984 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~- 1061 (1133)
+++.... ......+++.|+|||++.+ ..++.++|+||+||++|++++|+.||...........+.+......
T Consensus 164 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 164 LARQTDS------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred ccccccc------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 9864321 1223457889999999865 4578999999999999999999999976544333222221110000
Q ss_pred -ccccccC----Cc-CCCC-CCChhHHH----H-HHhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1062 -ISELLEP----GL-LELD-PESSEWEE----F-LLGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1062 -~~~~~~~----~~-~~~~-~~~~~~~~----~-~~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
+.+.+.. .. .... ........ . ....+++.+|++.||++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000 00 0000 00000000 0 11338899999999999999999994
No 384
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=4.1e-30 Score=293.76 Aligned_cols=276 Identities=23% Similarity=0.287 Sum_probs=196.6
Q ss_pred CCCcccccccccceeEEEEEEC-C--ceEEEEEEcccCCc---CHHHHHHHHHHHhhc-cCCCeeeEEEEEeC---CCCc
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-D--GMVLSIRRLRDGTI---DENTFRKEAEALGKV-KHRNLTVLRGYYAG---PPDV 907 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~--g~~vavK~~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~---~~~~ 907 (1133)
+|++.+.||+|+||.||+|+.. . +..||+|++..... ..+.+.+|+++++++ +||||+++++++.. ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4788899999999999999775 3 78899999864321 245678899999999 59999999987532 2244
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.++++||+. ++|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 578899985 6899888643 3488999999999999999999999999999999999999999999999999875
Q ss_pred cccCCCC-CCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc---
Q 001171 988 AIATPAE-ASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI--- 1062 (1133)
Q Consensus 988 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~--- 1062 (1133)
....... ........|+..|+|||++.+ ..++.++||||+||++|+|++|++||...+.......+.........
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 4322211 112234578999999998765 46789999999999999999999999765544443333332211000
Q ss_pred cccccCC-------cCCCCCCChhHHH-----HHHhHhhhhccCCCCCCCCCCHHHHHHH--HhcCcCCCCCC
Q 001171 1063 SELLEPG-------LLELDPESSEWEE-----FLLGVKVGLLCTAPDPLDRPSMADIVFM--LEGCRVGPDMP 1121 (1133)
Q Consensus 1063 ~~~~~~~-------~~~~~~~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~~--Le~~~~~~~~~ 1121 (1133)
.....+. ..... ...+.. -....+++.+|++.||++||++.|++++ +..+......+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~ 305 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIP--KKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEP 305 (332)
T ss_pred HhhhhhhHHHHHHhccccC--CcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccccc
Confidence 0000000 00000 000000 0122378999999999999999999843 44444433444
No 385
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=298.22 Aligned_cols=241 Identities=20% Similarity=0.259 Sum_probs=193.1
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
.++.|.+...+|.|+|+.|-++.+ .+++..+||++.+.. ....+|+.++... +|||++++.+.+.+..+. |+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~-~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEI-YLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcceeecceecCCcee-eeee
Confidence 467888888999999999988865 468899999997652 3455678776666 799999999999887554 9999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceee-CCCCceEEeccCcccccccC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLF-DADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll-~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
|.+.++-+.+.+...+. ....+..|+.+|+.|+.|||++||||||+||+|||+ +..++++++|||.++...+.
T Consensus 396 e~l~g~ell~ri~~~~~------~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPE------FCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hhccccHHHHHHHhcch------hHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999988877765432 225677799999999999999999999999999999 68999999999999765332
Q ss_pred CCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 992 PAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 992 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
....+-|..|.|||+.....|++++|+||+|+++|+|++|+.||.....+ ..+...++.+.+.+.
T Consensus 470 ------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~s~~------ 534 (612)
T KOG0603|consen 470 ------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKFSEC------ 534 (612)
T ss_pred ------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCccccc------
Confidence 33446678999999999999999999999999999999999999766555 223333333333211
Q ss_pred CCCCCChhHHHHHHh-HhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1072 ELDPESSEWEEFLLG-VKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~-~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
+... .+++.+|++.||.+||++.++..+=
T Consensus 535 -----------vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 535 -----------VSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred -----------cCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 1112 2899999999999999999998653
No 386
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8e-31 Score=301.37 Aligned_cols=257 Identities=23% Similarity=0.336 Sum_probs=209.8
Q ss_pred HHHHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeC----CC
Q 001171 832 TLEATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAG----PP 905 (1133)
Q Consensus 832 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~----~~ 905 (1133)
....++.|++.++||.|.+|.||+++.+ +|+.+|+|++.......++++.|.+|++.. .|||++.++|+|.. .+
T Consensus 14 lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 14 LPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 3345678999999999999999999764 688899999876666678899999999988 69999999999853 34
Q ss_pred CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 906 DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 906 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
+..|+|||||.+||.-|+++... +..+.|..+..|++.++.|+.|||...++|||||-.|||++.++.+|++|||.+
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVS 170 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeee
Confidence 56799999999999999998765 466999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCC-----CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAAST-----GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 1060 (1133)
..... ......+.+||+.|||||++.. ..|+.++|+||+|++..||..|.+|+....+...... .
T Consensus 171 aQlds---T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~---I---- 240 (953)
T KOG0587|consen 171 AQLDS---TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFL---I---- 240 (953)
T ss_pred eeeec---ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhcc---C----
Confidence 65432 2334566789999999999853 3478899999999999999999999976544322111 1
Q ss_pred cccccccCCcCCCCCCChhHHHHHHhH-hhhhccCCCCCCCCCCHHHHHHH
Q 001171 1061 QISELLEPGLLELDPESSEWEEFLLGV-KVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+..++....++.+...+ ++|..|+..|-++||++.+++++
T Consensus 241 ---------pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 241 ---------PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ---------CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 112233344455555555 88999999999999999998753
No 387
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=1.4e-30 Score=287.11 Aligned_cols=250 Identities=20% Similarity=0.303 Sum_probs=188.5
Q ss_pred CCCcccccccccceeEEEEEECC-ceEEEEEEccc---C---CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRD---G---TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~---~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
+|.+.++||+|+||.||++.+.. +..+++|.++. . ......+.+|++++++++|||++++++++.+.. ..++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD-AFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC-ceEE
Confidence 58889999999999999997753 34444444432 1 112345778999999999999999999887664 4589
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
||||+++++|.+++...... ...+++..+..++.|++.|++|||+.|++|+||||+||+++. +.++++|||.++....
T Consensus 80 v~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHT-GKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCC
Confidence 99999999999998764322 345899999999999999999999999999999999999975 5699999999865432
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
.. .......|+..|+|||...+..++.++|+||+|+++|+|++|+.||........... .. ....+.. +
T Consensus 158 ~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~---~~-~~~~~~~-~--- 226 (260)
T cd08222 158 SC---DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR---IV-EGPTPSL-P--- 226 (260)
T ss_pred Cc---ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH---HH-cCCCCCC-c---
Confidence 21 122234578899999999888889999999999999999999999964433222221 11 1111110 0
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.... ....+++.+|+..+|++||++.|++++
T Consensus 227 -------~~~~--~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 227 -------ETYS--RQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred -------chhc--HHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 0011 122378999999999999999999864
No 388
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=4.3e-30 Score=286.80 Aligned_cols=263 Identities=23% Similarity=0.326 Sum_probs=196.7
Q ss_pred CCcccccccccceeEEEEEEC-CceEEEEEEcccCC---cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 839 FDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGT---IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
|+..+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++|||++++++++... ...++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-RKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-CceEEEecC
Confidence 566788999999999999776 48999999987542 2245678899999999999999999998876 455999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
++ ++|.+++.... ..+++..+..++.+++.|++|||+.||+||||+|+||+++.++.++|+|||.++.......
T Consensus 80 ~~-~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 80 CD-MDLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred cC-cCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 97 68999998643 2388999999999999999999999999999999999999999999999999865432211
Q ss_pred CCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcccc------cc--
Q 001171 995 ASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQIS------EL-- 1065 (1133)
Q Consensus 995 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~------~~-- 1065 (1133)
......++..|+|||.+.+. .++.++||||+||++||+++|+.||......+....+.+......-. ..
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 --TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred --ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 22233456789999998766 78999999999999999999999997665544444433322111000 00
Q ss_pred ccCCcCCCCCCC--hhHHH-HHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1066 LEPGLLELDPES--SEWEE-FLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1066 ~~~~~~~~~~~~--~~~~~-~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+.......... ..... .....+++.+|+..||++||++.+++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 011111100000 00001 1123489999999999999999999863
No 389
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=2.4e-30 Score=283.28 Aligned_cols=235 Identities=25% Similarity=0.391 Sum_probs=187.8
Q ss_pred cccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCC
Q 001171 845 LSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGN 919 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gs 919 (1133)
||+|+||.||++..+ +++.||+|.+..... ..+.+..|++++++++|||++++++.+... ...++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE-EKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC-CeeEEEEecCCCCc
Confidence 699999999999775 589999999865433 245788999999999999999999988765 45599999999999
Q ss_pred HHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCC
Q 001171 920 LATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSST 999 (1133)
Q Consensus 920 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 999 (1133)
|.+++.... .+++.....++.|+++|+.|+|+.+++|+||+|+||+++.++.++++|||.+....... ....
T Consensus 80 L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~ 151 (250)
T cd05123 80 LFSHLSKEG-----RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---SRTN 151 (250)
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC---Cccc
Confidence 999998643 37899999999999999999999999999999999999999999999999986543221 1233
Q ss_pred CCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1000 TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1000 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
...++..|+|||...+...+.++|+||||+++|++++|+.||...+.......+.+ ....++... .
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~----------~-- 217 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFL----------S-- 217 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCC----------C--
Confidence 45678899999999888889999999999999999999999976554443333322 011111111 0
Q ss_pred HHHHHHhHhhhhccCCCCCCCCCCHHH
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRPSMAD 1106 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RPs~~e 1106 (1133)
....+++.+||..||++||++++
T Consensus 218 ----~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 218 ----PEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ----HHHHHHHHHHhcCCHhhCCCccc
Confidence 11237888999999999999954
No 390
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=3.7e-30 Score=317.46 Aligned_cols=145 Identities=21% Similarity=0.374 Sum_probs=127.9
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcC----HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTID----ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.++|.+.++||+|+||.||+|.+. .++.||||++...... ...+.+|+++++.++||||+++++++... ...++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~-~~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA-NNVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC-CEEEE
Confidence 357899999999999999999876 6899999998653321 35688899999999999999999888765 45599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
||||+++++|.+++...+ .+++..++.++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++
T Consensus 82 VmEy~~g~~L~~li~~~~-----~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYG-----YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999997643 37888899999999999999999999999999999999999999999999986
No 391
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.7e-30 Score=298.20 Aligned_cols=261 Identities=21% Similarity=0.316 Sum_probs=195.2
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCC----
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPD---- 906 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~---- 906 (1133)
..++|++.+.||+|+||.||+|+.. +++.||+|++..... ..+.+.+|++++++++|||++++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4668999999999999999999875 578999999864321 23567789999999999999999987754432
Q ss_pred -cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcc
Q 001171 907 -VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 907 -~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 985 (1133)
..++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+.||+||||||+||+++.++.++++|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccc
Confidence 368999999 6799998874 23889999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccc
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1133)
...... .....++..|+|||.+.+ ..++.++||||+||++||+++|+.||...........+....... ...
T Consensus 166 ~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~-~~~ 238 (343)
T cd07851 166 RHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTP-DEE 238 (343)
T ss_pred cccccc------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC-CHH
Confidence 644221 233467889999999855 367899999999999999999999997655544443333321110 000
Q ss_pred cccCCcC---------CCC-CCChhHHH-----HHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 LLEPGLL---------ELD-PESSEWEE-----FLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 ~~~~~~~---------~~~-~~~~~~~~-----~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
... .+. ... .....+.. -....+++.+|++.||++||++.|++++
T Consensus 239 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 239 LLQ-KISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHh-hccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000 000 000 00000111 1123389999999999999999999864
No 392
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-31 Score=285.08 Aligned_cols=250 Identities=16% Similarity=0.247 Sum_probs=210.4
Q ss_pred hcCCCcccccccccceeEEEEEECCce-EEEEEEcccCC----cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGM-VLSIRRLRDGT----IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~-~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
..+++....||-|+||.|-.+...... .+|+|.+++.. ..++.+..|-.+|...+.|.||+++.-|.+. .+.|+
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~-kyvYm 497 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS-KYVYM 497 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc-hhhhh
Confidence 345667778999999999999776433 48888886532 2345677899999999999999999988876 45599
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
.||-|-||.+...++..+. ++......++..+++|++|||++|||.|||||+|.++|.+|-+|+.|||+|+...
T Consensus 498 LmEaClGGElWTiLrdRg~-----Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~- 571 (732)
T KOG0614|consen 498 LMEACLGGELWTILRDRGS-----FDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG- 571 (732)
T ss_pred hHHhhcCchhhhhhhhcCC-----cccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhc-
Confidence 9999999999999987654 6777788899999999999999999999999999999999999999999998763
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
...+..+++||+.|.|||++..+..+.++|.||+|+.+||+++|.+||...++...+..+.+++....++..+...
T Consensus 572 ---~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~- 647 (732)
T KOG0614|consen 572 ---SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKT- 647 (732)
T ss_pred ---cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchh-
Confidence 3345667899999999999999999999999999999999999999999999999999998887766554333321
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCC-----HHHHHHHH
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPS-----MADIVFML 1111 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs-----~~evl~~L 1111 (1133)
+.+++.+.+..+|.+|.. +.||-++-
T Consensus 648 ---------------a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~ 678 (732)
T KOG0614|consen 648 ---------------ATDLIKKLCRDNPTERLGYQKGGINDIKKHR 678 (732)
T ss_pred ---------------HHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence 237888888999999974 77887764
No 393
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=4.4e-30 Score=250.41 Aligned_cols=262 Identities=18% Similarity=0.315 Sum_probs=196.9
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcCHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCC-CcEEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDENTFRKEAEALGKVK-HRNLTVLRGYYAGPP-DVRLLV 911 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~-~~~~lV 911 (1133)
..++|++.+++|+|.++.||.|.. .+.+.++||.++. ...+.+.+|+.|++.+. ||||+.+++...++. ....+|
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP--VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP--VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech--HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 456899999999999999999964 5688999999874 34678999999999997 999999999987653 334699
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC-CceEEeccCccccccc
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD-FEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~ 990 (1133)
+||+.+.+...+... ++...++.++.+++.||.|+|++||+|||+||.|||+|.. -..+++|||+|.+..+
T Consensus 114 FE~v~n~Dfk~ly~t--------l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYPT--------LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhhhccccHHHHhhh--------hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 999999888777654 6777888899999999999999999999999999999864 5689999999987644
Q ss_pred CCCCCCCCCCCCCCCCccCccccCC-CCCCCCCchhHHHHHHHHHHhCCCCCcc-CChhhHHHHHHHHhhhccccc----
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAAST-GQPTKEADVYSFGIVLLEILTGRKPVMF-TQDEDIVKWVKKQLQRGQISE---- 1064 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~tg~~Pf~~-~~~~~~~~~~~~~~~~~~~~~---- 1064 (1133)
... ..-++.+..|.-||.+.. ..|+..-|+|||||++..|+..+.||.. .+..+....+.+.+...++..
T Consensus 186 ~~e----YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 186 GKE----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred Cce----eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 322 233466778899999854 4578889999999999999999999853 333333333333322222111
Q ss_pred ---cccCCcCCCC--CCChhHHHH----------HHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1065 ---LLEPGLLELD--PESSEWEEF----------LLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1065 ---~~~~~~~~~~--~~~~~~~~~----------~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
.+|+.+..+. .....|+.| ..+++++.+.+..|-.+|+|++|.+.+
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 1222221110 111223332 234588999999999999999998854
No 394
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=259.42 Aligned_cols=199 Identities=21% Similarity=0.395 Sum_probs=173.5
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccC----CcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG----TIDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 908 (1133)
..++|.+.++||+|+|+.|..++++ +.+.+|+|++++. ..+.+-++.|-.+..+. +||.+|.++.+|... ...
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte-srl 326 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE-SRL 326 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc-ceE
Confidence 3458999999999999999999875 5788999998753 33445677888888887 799999999888765 456
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
++|.||++||+|--++++.+. ++++.++.+...|.-||.|||++||+.||+|.+||++|..|++|++|||+++..
T Consensus 327 ffvieyv~ggdlmfhmqrqrk-----lpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEEecCcceeeehhhhhc-----CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcC
Confidence 899999999999888887543 889999999999999999999999999999999999999999999999998754
Q ss_pred ccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCc
Q 001171 989 IATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~ 1042 (1133)
.. ......+.+||+.|.|||++.+..|...+|.|++||+|+||+.|+.||+
T Consensus 402 l~---~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 402 LG---PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred CC---CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 32 2334567899999999999999999999999999999999999999996
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-29 Score=239.90 Aligned_cols=200 Identities=23% Similarity=0.393 Sum_probs=162.3
Q ss_pred CCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc--CHHHHHHHHHHHhh-ccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI--DENTFRKEAEALGK-VKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~-l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
.......||+|++|.|-+.++ ++|+..|+|+++.... ..++..+|+.+..+ ..+|.+|.++|.+....+. ++.||
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv-wIcME 125 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV-WICME 125 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE-EEeHH
Confidence 445567799999999988877 4799999999975433 34567778887554 5899999999987765554 99999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC-CceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL-DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
.| .-||+.+.++.-. .+..+++...-+||..|+.||.|||++ .|+|||+||+|||++.+|++|+||||.+-...+.-
T Consensus 126 ~M-~tSldkfy~~v~~-~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 126 LM-DTSLDKFYRKVLK-KGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred Hh-hhhHHHHHHHHHh-cCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence 99 5688877665433 346689999999999999999999976 79999999999999999999999999986553321
Q ss_pred CCCCCCCCCCCCCCccCccccCC----CCCCCCCchhHHHHHHHHHHhCCCCCccC
Q 001171 993 AEASSSTTPIGSLGYVSPEAAST----GQPTKEADVYSFGIVLLEILTGRKPVMFT 1044 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlG~il~el~tg~~Pf~~~ 1044 (1133)
..+...|...|||||.+.. ..|+-++||||+|+++.||.++++||..+
T Consensus 204 ----Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 204 ----AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred ----HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 1223468889999999853 36899999999999999999999999643
No 396
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=3.5e-29 Score=271.41 Aligned_cols=219 Identities=18% Similarity=0.207 Sum_probs=169.7
Q ss_pred ccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCHHHHHHh
Q 001171 848 GRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQE 926 (1133)
Q Consensus 848 G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 926 (1133)
|.+|.||+++++ +++.||+|++.... .+.+|...+....|||++++++++... +..++||||+++|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSE-DSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecC-CeEEEEEecCCCCCHHHHHHH
Confidence 899999999764 68999999997542 344566666667899999999998876 445999999999999999876
Q ss_pred hccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCC
Q 001171 927 ASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLG 1006 (1133)
Q Consensus 927 ~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 1006 (1133)
.. .+++..+..++.|+++|++|+|+.||+||||||+||+++.++.++++|||.+...... .....++..
T Consensus 79 ~~-----~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------~~~~~~~~~ 147 (237)
T cd05576 79 FL-----NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------CDGEAVENM 147 (237)
T ss_pred hc-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc------cccCCcCcc
Confidence 43 2789999999999999999999999999999999999999999999999987543221 122345678
Q ss_pred ccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHh
Q 001171 1007 YVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLG 1086 (1133)
Q Consensus 1007 y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1086 (1133)
|+|||...+..++.++||||+||++|||++|+.|+...... . ... .. ...+... . ...
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~--------~~~--~~------~~~~~~~---~--~~~ 205 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-I--------NTH--TT------LNIPEWV---S--EEA 205 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c--------ccc--cc------cCCcccC---C--HHH
Confidence 99999998888899999999999999999999887432110 0 000 00 0000000 0 112
Q ss_pred HhhhhccCCCCCCCCCCH
Q 001171 1087 VKVGLLCTAPDPLDRPSM 1104 (1133)
Q Consensus 1087 ~~li~~Cl~~dP~~RPs~ 1104 (1133)
.+++.+|++.||++||++
T Consensus 206 ~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 206 RSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHccCCHHHhcCC
Confidence 378899999999999997
No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2e-29 Score=277.46 Aligned_cols=206 Identities=21% Similarity=0.385 Sum_probs=171.3
Q ss_pred CCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc----CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
-|..++.||-|+||+|..++. ++...||+|.+++... ....++.|-+||...+.+=||+++..|.+++. .|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdn-LYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDN-LYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCc-eEEEE
Confidence 466788999999999999954 4578899999976433 23457889999999999999999998888754 59999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
||++||++-.+|-+.+. +++..++.++..+.+|+++.|..|+|||||||+|||||.+|++|++|||++.-+.=.+
T Consensus 709 dYIPGGDmMSLLIrmgI-----FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGI-----FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred eccCCccHHHHHHHhcc-----CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecc
Confidence 99999999999988654 7788888899999999999999999999999999999999999999999984322110
Q ss_pred --------CCCC-------------------------------CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHH
Q 001171 993 --------AEAS-------------------------------SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLE 1033 (1133)
Q Consensus 993 --------~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~e 1033 (1133)
.... .....+||+.|+|||++....|+..+|.||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 0000 0013479999999999999999999999999999999
Q ss_pred HHhCCCCCccCChhhH
Q 001171 1034 ILTGRKPVMFTQDEDI 1049 (1133)
Q Consensus 1034 l~tg~~Pf~~~~~~~~ 1049 (1133)
|+.|+.||....+.+.
T Consensus 864 m~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGET 879 (1034)
T ss_pred HhhCCCCccCCCCCcc
Confidence 9999999976555443
No 398
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=6.1e-29 Score=298.47 Aligned_cols=263 Identities=19% Similarity=0.226 Sum_probs=165.7
Q ss_pred HhcCCCcccccccccceeEEEEEEC-C----ceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEE----E-eCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-D----GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGY----Y-AGP 904 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~----~-~~~ 904 (1133)
..++|.+.++||+|+||.||+|.+. + +..||+|++..... .+.+..| .++...+.+++.+... . ...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 4568999999999999999999875 4 68999999764321 1111111 1112222222221111 1 123
Q ss_pred CCcEEEEEeccCCCCHHHHHHhhccC---------------CCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccce
Q 001171 905 PDVRLLVYDYMPNGNLATLLQEASHQ---------------DGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNV 969 (1133)
Q Consensus 905 ~~~~~lV~e~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NI 969 (1133)
+...++||||+++++|.++++..... .........+..++.||+.||+|||+++|+||||||+||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence 34568999999999999998753210 000112234557899999999999999999999999999
Q ss_pred eeCC-CCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCC----------------------CCCCCCchhH
Q 001171 970 LFDA-DFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG----------------------QPTKEADVYS 1026 (1133)
Q Consensus 970 ll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~DvwS 1026 (1133)
|++. ++.+||+|||+|+...... ........+++.|+|||.+... .++.++||||
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~--~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGI--NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred EEeCCCCcEEEEeCCCcccccccc--ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 9986 5789999999997542221 1223456789999999965322 2345679999
Q ss_pred HHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc-----ccccccCCcCCCCCCChh-HH----HHHHhHhhhhccCCC
Q 001171 1027 FGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ-----ISELLEPGLLELDPESSE-WE----EFLLGVKVGLLCTAP 1096 (1133)
Q Consensus 1027 lG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~----~~~~~~~li~~Cl~~ 1096 (1133)
+||++|||+++..|+.. +.... .+.+.... ......+.. ...... ++ ......+++.+|++.
T Consensus 365 lGviL~el~~~~~~~~~----~~~~~-~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDS----NLIQF-NRQLKRNDYDLVAWRKLVEPRA---SPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred HHHHHHHHHhCcCCCch----HHHHH-HHHHHhcCCcHHHHHHhhcccc---chhhhhhhhhccccchHHHHHHHHHccC
Confidence 99999999997766431 11111 11111100 000111110 000000 00 001122799999999
Q ss_pred CCCCCCCHHHHHHH
Q 001171 1097 DPLDRPSMADIVFM 1110 (1133)
Q Consensus 1097 dP~~RPs~~evl~~ 1110 (1133)
||++|||+.|++++
T Consensus 437 dP~kR~ta~e~L~H 450 (566)
T PLN03225 437 KGRQRISAKAALAH 450 (566)
T ss_pred CcccCCCHHHHhCC
Confidence 99999999999986
No 399
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=266.85 Aligned_cols=256 Identities=20% Similarity=0.317 Sum_probs=190.0
Q ss_pred hcCCCcccccccccceeEEEEEE-CCceEEEEEEcc--cCCcC------HHHHHHHHHHHhhccCCCeeeEEEEEeCCCC
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLR--DGTID------ENTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~--~~~~~------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 906 (1133)
.++|-+...||+|+|+.||+|.+ ...+.||||+-. +.-.+ .+...+|.+|-+.++||.||++++|+.-+.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 34677889999999999999954 567788888753 22111 2345689999999999999999999987767
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC--CceecccCccceeeC---CCCceEEec
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL--DMVHGDIKPQNVLFD---ADFEAHLSE 981 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~--~ivH~Dlkp~NIll~---~~~~~kl~D 981 (1133)
..+-|.|||+|.+|+=+++.++. +++.+++.|+.||+.||.||.+. .|||-||||.|||+. .-|.+||+|
T Consensus 542 sFCTVLEYceGNDLDFYLKQhkl-----mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHKL-----MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred cceeeeeecCCCchhHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeee
Confidence 77999999999999999987543 78899999999999999999865 599999999999994 357899999
Q ss_pred cCcccccccCCCCC----CCCCCCCCCCCccCccccCCC----CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHH
Q 001171 982 FGLDRLAIATPAEA----SSSTTPIGSLGYVSPEAASTG----QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWV 1053 (1133)
Q Consensus 982 fg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~ 1053 (1133)
||+++......... .-.....||.+|.+||.+.-+ +.+.|+||||+|||+|..+.|+.||...... +.+
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ---QdI 693 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ---QDI 693 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH---HHH
Confidence 99998765432221 112345799999999998433 4688999999999999999999999643322 112
Q ss_pred HHHhhhccccccccCCcCCCCCCChhHHHHH-HhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1054 KKQLQRGQISELLEPGLLELDPESSEWEEFL-LGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
.+...-....++ .+++.. .+. .+.++|++|+++--++|....++..
T Consensus 694 LqeNTIlkAtEV------qFP~KP----vVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 694 LQENTILKATEV------QFPPKP----VVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred Hhhhchhcceec------cCCCCC----ccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 111111111111 111111 111 1227899999999999998887753
No 400
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=3.4e-28 Score=283.74 Aligned_cols=206 Identities=21% Similarity=0.300 Sum_probs=153.3
Q ss_pred HhcCCCcccccccccceeEEEEEE-----------------CCceEEEEEEcccCCcC---------------HHHHHHH
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-----------------QDGMVLSIRRLRDGTID---------------ENTFRKE 882 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~---------------~~~~~~E 882 (1133)
..++|++.++||+|+||+||+|.. ..++.||||++...... .+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 466899999999999999999954 23568999998643211 1223457
Q ss_pred HHHHhhccCCCe-----eeEEEEEeCC-------CCcEEEEEeccCCCCHHHHHHhhccC-------------------C
Q 001171 883 AEALGKVKHRNL-----TVLRGYYAGP-------PDVRLLVYDYMPNGNLATLLQEASHQ-------------------D 931 (1133)
Q Consensus 883 ~~~l~~l~hpni-----v~l~~~~~~~-------~~~~~lV~e~~~~gsL~~~l~~~~~~-------------------~ 931 (1133)
+.++.+++|.++ +++++||... ....++||||+++++|.++++..... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888876654 6677776531 23468999999999999999753210 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCcc
Q 001171 932 GHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPE 1011 (1133)
Q Consensus 932 ~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 1011 (1133)
....++..+..++.|++.|++|+|+.+|+||||||+||+++.++.+||+|||+++...... ........+++.|+|||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~--~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI--NFNPLYGMLDPRYSPPE 380 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC--ccCccccCCCcceeChh
Confidence 1235677888999999999999999999999999999999999999999999986432211 11122234578999999
Q ss_pred ccCCCC--------------------C--CCCCchhHHHHHHHHHHhCCC-CCc
Q 001171 1012 AASTGQ--------------------P--TKEADVYSFGIVLLEILTGRK-PVM 1042 (1133)
Q Consensus 1012 ~~~~~~--------------------~--~~~~DvwSlG~il~el~tg~~-Pf~ 1042 (1133)
.+.... + ..+.||||+||++|+|++|.. ||.
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 875322 1 234799999999999999875 664
No 401
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=2.8e-29 Score=287.43 Aligned_cols=246 Identities=25% Similarity=0.400 Sum_probs=184.9
Q ss_pred Ccccccccccce-eEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEEeccCC
Q 001171 840 DEENVLSRGRYG-LIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVYDYMPN 917 (1133)
Q Consensus 840 ~~~~~lg~G~~g-~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~e~~~~ 917 (1133)
.-.+++|.|+.| .||+|.+. |+.||||++-.+. .+...+|++.++.- +|||||++++.-. ++...|++.|.| .
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~-d~qF~YIalELC-~ 586 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQ-DRQFLYIALELC-A 586 (903)
T ss_pred ccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeecc-CCceEEEEehHh-h
Confidence 334679999998 56999886 8899999996433 35678999999888 6999999876544 346779999999 6
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC---C--CceEEeccCcccccccCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA---D--FEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~---~--~~~kl~Dfg~a~~~~~~~ 992 (1133)
.+|.+++...+ .+.....-...+.+..|++.|++|||+.+||||||||.||||+. + ..++|+|||+++......
T Consensus 587 ~sL~dlie~~~-~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 587 CSLQDLIESSG-LDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred hhHHHHHhccc-cchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 79999998741 11111221345667899999999999999999999999999965 3 468999999998876665
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccccccccCCcC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLL 1071 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1133)
..........||-+|+|||++....-+.++||||+||++|+.++ |.+||...-..+ ..+.. +.. .+.
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~----~~~------~L~ 733 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILT----GNY------TLV 733 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhc----Ccc------cee
Confidence 55555667789999999999988888899999999999999999 589996432211 11111 100 000
Q ss_pred CCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHH
Q 001171 1072 ELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIV 1108 (1133)
Q Consensus 1072 ~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl 1108 (1133)
.+.+. .++ .+.++|.+|+++||..||++.+|+
T Consensus 734 ~L~~~-~d~----eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 734 HLEPL-PDC----EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred eeccC-chH----HHHHHHHHhcCCCcccCCCHHHHh
Confidence 11111 111 344899999999999999999998
No 402
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=7.3e-28 Score=261.97 Aligned_cols=236 Identities=26% Similarity=0.372 Sum_probs=186.7
Q ss_pred cceeEEEEEEC-CceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCHHHHHH
Q 001171 849 RYGLIFKASYQ-DGMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQ 925 (1133)
Q Consensus 849 ~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~ 925 (1133)
+||.||+|.++ +|+.+|+|++...... .+.+.+|++.+++++|+|++++++++... ...+++|||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE-DKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC-CEEEEEEeCCCCCCHHHHHH
Confidence 58999999886 4899999998754332 57899999999999999999999998775 45599999999999999987
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCC
Q 001171 926 EASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSL 1005 (1133)
Q Consensus 926 ~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~ 1005 (1133)
.... +++..+..++.+++++++|||+.+++|+||+|+||+++.++.++++|||.+....... ......++.
T Consensus 80 ~~~~-----~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~ 150 (244)
T smart00220 80 KRGR-----LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----LLTTFVGTP 150 (244)
T ss_pred hccC-----CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc----ccccccCCc
Confidence 6332 7889999999999999999999999999999999999999999999999987543321 233456788
Q ss_pred CccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCcc-CChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHH
Q 001171 1006 GYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMF-TQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFL 1084 (1133)
Q Consensus 1006 ~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1084 (1133)
.|++||...+..++.++||||+|+++|++++|..||.. .+.....+..... .... .. ..... ..
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~----~~~~-~~--------~~~~~--~~ 215 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKP----KPPF-PP--------PEWKI--SP 215 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc----CCCC-cc--------ccccC--CH
Confidence 99999999888889999999999999999999999965 3333333332221 1000 00 00000 01
Q ss_pred HhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1085 LGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1085 ~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
...+++.+|+..+|++||++.++++
T Consensus 216 ~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 216 EAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHccCCchhccCHHHHhh
Confidence 2237889999999999999999986
No 403
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=8.5e-30 Score=254.10 Aligned_cols=266 Identities=18% Similarity=0.261 Sum_probs=191.4
Q ss_pred CCcccccccccceeEEEEEE-CCceEEEEEEcccC---CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC----CcEEE
Q 001171 839 FDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDG---TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPP----DVRLL 910 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~~l 910 (1133)
.+..+.||.|+||+||.+.+ ++|+.||.|++..- -...+.+.+|++++.-.+|.|+...++...-.. +..|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 45567899999999999965 68999999998632 223578889999999999999998887765332 12367
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
++|.| ..+|..++-. .+.++...+..+.+||++||.|||+.+|.||||||.|.+++++...||||||++|....
T Consensus 135 ~TELm-QSDLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHH-Hhhhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch
Confidence 77877 4466655543 24477777788899999999999999999999999999999999999999999975422
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc--------
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ-------- 1061 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~-------- 1061 (1133)
.. ....+..+.|..|+|||.+.+. .|+.+.||||.|||+.|++..+.-|...++-+..+.+.+......
T Consensus 209 d~--~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 209 RD--RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred hh--hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 21 1222334678899999999875 589999999999999999998888876665554444444332211
Q ss_pred ---ccccccCCcCC-----CCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1062 ---ISELLEPGLLE-----LDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1062 ---~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
-..++...... +..-..+.......+.+..+++..||++|.+.++.+.++.
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 11111111111 1111111112223346778899999999999999987764
No 404
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-27 Score=245.85 Aligned_cols=259 Identities=20% Similarity=0.249 Sum_probs=190.9
Q ss_pred cCCCcccccccccceeEEEEEE-CCceEEEEEEcccC---CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCC-----Cc
Q 001171 837 RQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDG---TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPP-----DV 907 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~ 907 (1133)
.+|.-.+.+|.|.- .|..|.+ -.++.||+|++... ....++..+|...+..++|+|+++++.+|.-.. ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777788999988 6666644 36899999998543 223467789999999999999999999985321 23
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.|+|||+| ..+|.+.+.-. ++-.....+.+|+++|+.|||+.||+||||||+||++..+..+||.|||+|+.
T Consensus 96 ~y~v~e~m-~~nl~~vi~~e-------lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILME-------LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhh-hhHHHHHHHHh-------cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcc
Confidence 48999999 67888888731 67778889999999999999999999999999999999999999999999974
Q ss_pred cccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhcc------
Q 001171 988 AIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQ------ 1061 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~------ 1061 (1133)
... .-..+..+.|..|+|||++.+..+.+.+||||.||++.||++|+.-|.+.+.-+.+..+.+......
T Consensus 168 e~~----~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 168 EDT----DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred cCc----ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 322 1344567889999999999988899999999999999999999988865443332222222211110
Q ss_pred -------------------ccc-cccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1062 -------------------ISE-LLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1062 -------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
+.+ +.|..+.... +.. ..+-..+-+++.+|+..||++|.++++++++
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~-e~~-~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVL-EGS-KLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccc-cCC-ccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 001 1111111000 000 0111122278999999999999999999976
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=1e-27 Score=262.71 Aligned_cols=196 Identities=22% Similarity=0.343 Sum_probs=167.8
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHH---------HHHHHHHHHhhcc---CCCeeeEEEEEe
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDEN---------TFRKEAEALGKVK---HRNLTVLRGYYA 902 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---------~~~~E~~~l~~l~---hpniv~l~~~~~ 902 (1133)
-.+|+..+.+|+|+||.|+.|.++ +...|+||.+.+...-.+ .+-.|++||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 346899999999999999999876 467889999876544322 3456999999997 999999999999
Q ss_pred CCCCcEEEEEeccC-CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEec
Q 001171 903 GPPDVRLLVYDYMP-NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSE 981 (1133)
Q Consensus 903 ~~~~~~~lV~e~~~-~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~D 981 (1133)
+++.+ |++||-.. +.+|++++..+.. +++.....|+.||+.|++|||+.||||||||-+||.++.+|-+|++|
T Consensus 640 ddd~y-yl~te~hg~gIDLFd~IE~kp~-----m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 640 DDDYY-YLETEVHGEGIDLFDFIEFKPR-----MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred cCCee-EEEecCCCCCcchhhhhhccCc-----cchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEee
Confidence 87554 99999874 4599999987543 78899999999999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCCCCCCCCCCCCCccCccccCCCCC-CCCCchhHHHHHHHHHHhCCCCCc
Q 001171 982 FGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQP-TKEADVYSFGIVLLEILTGRKPVM 1042 (1133)
Q Consensus 982 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~el~tg~~Pf~ 1042 (1133)
||.|.+... ......+||..|.|||++.+..| +..-|||++|+++|-++...-||.
T Consensus 714 fgsaa~~ks-----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKS-----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcC-----CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999866532 34456789999999999998887 677899999999999998888874
No 406
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.8e-26 Score=246.49 Aligned_cols=132 Identities=19% Similarity=0.334 Sum_probs=113.5
Q ss_pred hcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcCHHHHHHHHHHHhhcc-----C---CCeeeEEEEEeCC--
Q 001171 836 TRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDENTFRKEAEALGKVK-----H---RNLTVLRGYYAGP-- 904 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----h---pniv~l~~~~~~~-- 904 (1133)
..+|.+.++||=|-|++||.|.+ +..+.||+|+.+....-.+....|++++++++ | .+||+++++|...
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 46899999999999999999955 56789999999876665677888999999984 2 4699999999642
Q ss_pred -CCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC-CceecccCccceee
Q 001171 905 -PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL-DMVHGDIKPQNVLF 971 (1133)
Q Consensus 905 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~ivH~Dlkp~NIll 971 (1133)
+...++|+|+. |.+|..++.....+. ++...+.+|++||+.||.|||+. ||||.||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrG---lpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRG---LPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCC---CcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 23348999999 789999999877654 89999999999999999999975 79999999999999
No 407
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=3.9e-27 Score=254.76 Aligned_cols=268 Identities=20% Similarity=0.220 Sum_probs=204.7
Q ss_pred HHhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhcc------CCCeeeEEEEEeCCCC
Q 001171 834 EATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKVK------HRNLTVLRGYYAGPPD 906 (1133)
Q Consensus 834 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~------hpniv~l~~~~~~~~~ 906 (1133)
.-..+|.+....|+|-|++|.+|.++ .|..||||++.......+.=.+|+++|++|+ --|+++++..|....
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn- 507 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN- 507 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc-
Confidence 34568999999999999999999765 4789999999887766677788999999995 246788877776654
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC-CceEEeccCcc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD-FEAHLSEFGLD 985 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 985 (1133)
..|+|+|.+ ..+|.+++++.+.. --+....+..+++|+.-||.+|-..||+|.||||.|||+++. ..+||||||.|
T Consensus 508 HLClVFE~L-slNLRevLKKyG~n--vGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 508 HLCLVFEPL-SLNLREVLKKYGRN--VGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred eeEEEehhh-hchHHHHHHHhCcc--cceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccc
Confidence 459999988 67999999998764 337788899999999999999999999999999999999875 45799999998
Q ss_pred cccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHH--------Hh
Q 001171 986 RLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK--------QL 1057 (1133)
Q Consensus 986 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~--------~~ 1057 (1133)
..... ...+.+..+..|.|||++.|..|+...|+||+||++||+.||+.-|.+.....+...... .+
T Consensus 585 ~~~~e-----neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 585 SFASE-----NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred ccccc-----ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 65432 223344566789999999999999999999999999999999999987766666555433 22
Q ss_pred hhcccc-ccccCCcCC-------------------CCC--------------CChhHHHHHHhHhhhhccCCCCCCCCCC
Q 001171 1058 QRGQIS-ELLEPGLLE-------------------LDP--------------ESSEWEEFLLGVKVGLLCTAPDPLDRPS 1103 (1133)
Q Consensus 1058 ~~~~~~-~~~~~~~~~-------------------~~~--------------~~~~~~~~~~~~~li~~Cl~~dP~~RPs 1103 (1133)
+.+++. +.+|..+.= ..+ ...+...+....++..+|+..||++|.+
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 222221 122222110 000 0112222222237899999999999999
Q ss_pred HHHHHHH
Q 001171 1104 MADIVFM 1110 (1133)
Q Consensus 1104 ~~evl~~ 1110 (1133)
..+.+++
T Consensus 740 ~nqAL~H 746 (752)
T KOG0670|consen 740 VNQALKH 746 (752)
T ss_pred HHHHhcC
Confidence 9998864
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=5.4e-25 Score=233.54 Aligned_cols=210 Identities=28% Similarity=0.463 Sum_probs=177.9
Q ss_pred cccccceeEEEEEECC-ceEEEEEEcccCCcC--HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCHH
Q 001171 845 LSRGRYGLIFKASYQD-GMVLSIRRLRDGTID--ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLA 921 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL~ 921 (1133)
||+|.+|.||++...+ ++.+++|++...... .+.+.+|++.++.++|++++++++++... ...+++|||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-NHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-CeEEEEEecCCCCcHH
Confidence 6899999999998764 899999999765442 47899999999999999999999999876 4559999999999999
Q ss_pred HHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC-CCceEEeccCcccccccCCCCCCCCCC
Q 001171 922 TLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA-DFEAHLSEFGLDRLAIATPAEASSSTT 1000 (1133)
Q Consensus 922 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 1000 (1133)
+++.... ..+++..+..++.+++++++|||+.|++|+||+|.||+++. ++.++++|||.+........ ....
T Consensus 80 ~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---~~~~ 152 (215)
T cd00180 80 DLLKENE----GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---LLKT 152 (215)
T ss_pred HHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---hhhc
Confidence 9998642 24789999999999999999999999999999999999999 89999999999865432211 1233
Q ss_pred CCCCCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChh
Q 001171 1001 PIGSLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSE 1079 (1133)
Q Consensus 1001 ~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1079 (1133)
..+...|++||..... .++.+.|+|++|++++++
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 4577899999999777 788999999999999999
Q ss_pred HHHHHHhHhhhhccCCCCCCCCCCHHHHHHHH
Q 001171 1080 WEEFLLGVKVGLLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1080 ~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
....+++.+|++.+|++||++.++++.+
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1112677889999999999999998753
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=1e-25 Score=241.07 Aligned_cols=199 Identities=23% Similarity=0.405 Sum_probs=163.4
Q ss_pred HhcCCCcccccccccceeEEEEEEC----CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ----DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRL 909 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~ 909 (1133)
....|..+++||+|.|++||+|... ..+.||+|.+.... ....+..|+++|..+ -+.||+++.+++...+.. .
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v-~ 111 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV-A 111 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCee-E
Confidence 4557899999999999999999553 46889999996533 457799999999999 589999999988776554 8
Q ss_pred EEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC-CCceEEeccCccccc
Q 001171 910 LVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA-DFEAHLSEFGLDRLA 988 (1133)
Q Consensus 910 lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~ 988 (1133)
+|+||++.....++... ++...+..+.+.+..||.|+|..|||||||||.|++.+. .+.-.|.|||+|...
T Consensus 112 ivlp~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred EEecccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence 99999999999988875 678888899999999999999999999999999999975 467799999998621
Q ss_pred ccC---------------C--C------------------------CCCCCCCCCCCCCccCccccCCC-CCCCCCchhH
Q 001171 989 IAT---------------P--A------------------------EASSSTTPIGSLGYVSPEAASTG-QPTKEADVYS 1026 (1133)
Q Consensus 989 ~~~---------------~--~------------------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS 1026 (1133)
... . + .......+.||++|+|||++... ..+.++||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 100 0 0 00001234699999999998654 4689999999
Q ss_pred HHHHHHHHHhCCCCCcc
Q 001171 1027 FGIVLLEILTGRKPVMF 1043 (1133)
Q Consensus 1027 lG~il~el~tg~~Pf~~ 1043 (1133)
.|||+..++++++||..
T Consensus 264 ~GVI~Lslls~~~PFf~ 280 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFK 280 (418)
T ss_pred ccceeehhhcccccccc
Confidence 99999999999999953
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-26 Score=256.15 Aligned_cols=252 Identities=21% Similarity=0.364 Sum_probs=195.2
Q ss_pred HhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
..++|+..+++|.|.||.||||++ +.++..|+|.++.... +.+..++|+-+++..+|||||.++|.|...+. .+++|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dk-lwicM 91 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDK-LWICM 91 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcC-cEEEE
Confidence 456899999999999999999966 5789999999975433 35677899999999999999999998877644 49999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|||.+|+|++..+.-+ .+++.+...+++...+|++|||++|-+|||||-.||++++.|.+|++|||.+-.+.
T Consensus 92 EycgggslQdiy~~Tg-----plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit--- 163 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTG-----PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT--- 163 (829)
T ss_pred EecCCCcccceeeecc-----cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh---
Confidence 9999999999877533 37788888899999999999999999999999999999999999999999875432
Q ss_pred CCCCCCCCCCCCCCccCcccc---CCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAA---STGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
....+.....||+.|||||+. ..+.|..++|||+.|+...|+-.-++|.....+......+.+- .+-.+.
T Consensus 164 ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS-------~~qpp~ 236 (829)
T KOG0576|consen 164 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS-------GFQPPT 236 (829)
T ss_pred hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc-------CCCCCc
Confidence 223345567899999999986 4567899999999999999998877775433332222221111 111122
Q ss_pred cCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHH
Q 001171 1070 LLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIV 1108 (1133)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl 1108 (1133)
+.+ ...|.++.. +++..|+..+|.+||+++.++
T Consensus 237 lkD----k~kws~~fh--~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 237 LKD----KTKWSEFFH--NFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred ccC----CccchHHHH--HHHHHHhcCCCccCCChhhhe
Confidence 211 112222222 678889999999999988765
No 411
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=6e-26 Score=227.27 Aligned_cols=209 Identities=22% Similarity=0.349 Sum_probs=164.3
Q ss_pred HhcCCCcccccccccceeEEEEEEC-CceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcEEEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDVRLLVY 912 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~~lV~ 912 (1133)
-.+.|++.+.+|+|.||.+-.++++ +.+.+++|.++......++|.+|...--.+ .|.||+.-++......+..++++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 3457899999999999999999887 478899999988887889999999876566 68999988776544445668999
Q ss_pred eccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceee-CC-CCceEEeccCccccccc
Q 001171 913 DYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLF-DA-DFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 913 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll-~~-~~~~kl~Dfg~a~~~~~ 990 (1133)
||++.|+|..-+...+ +.+..-.+++.|++.|+.|||++.+||||||.+|||| +. ..++|+||||.++....
T Consensus 102 E~aP~gdL~snv~~~G------igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAG------IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred ccCccchhhhhcCccc------ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 9999999998887643 5667778899999999999999999999999999999 33 34799999999864321
Q ss_pred CCCCCCCCCCCCCCCCccCccccCCC-----CCCCCCchhHHHHHHHHHHhCCCCCccCC--hhhHHHHHHH
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAASTG-----QPTKEADVYSFGIVLLEILTGRKPVMFTQ--DEDIVKWVKK 1055 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~el~tg~~Pf~~~~--~~~~~~~~~~ 1055 (1133)
. .....-+..|.|||..... ...+.+|||.||+++|.++||+.||.... +...+.|...
T Consensus 176 t------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w 241 (378)
T KOG1345|consen 176 T------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW 241 (378)
T ss_pred e------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH
Confidence 1 1122344578999986432 24778999999999999999999997432 3344444433
No 412
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=2.6e-24 Score=231.21 Aligned_cols=198 Identities=28% Similarity=0.483 Sum_probs=168.7
Q ss_pred CCcccccccccceeEEEEEECC-ceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 839 FDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
|.+.+.||+|++|.||+|...+ ++.+|+|.+..... ..+.+.+|++.+++++|+|++++++++... ...++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP-EPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC-CceEEEEecc
Confidence 5677899999999999998865 89999999976543 357889999999999999999999998765 4558999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
++++|.+++...... +++..+..++.+++.++.|+|+.+++|+|++|+||+++.++.++++|||.+........
T Consensus 80 ~~~~L~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-- 153 (225)
T smart00221 80 EGGDLFDYLRKKGGK----LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-- 153 (225)
T ss_pred CCCCHHHHHHhcccC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc--
Confidence 999999999864321 68889999999999999999999999999999999999999999999999876533221
Q ss_pred CCCCCCCCCCCccCcccc-CCCCCCCCCchhHHHHHHHHHHhCCCCCcc
Q 001171 996 SSSTTPIGSLGYVSPEAA-STGQPTKEADVYSFGIVLLEILTGRKPVMF 1043 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~il~el~tg~~Pf~~ 1043 (1133)
.......++..|++||.. ....++.++|||++|++++||++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122334677889999998 666778899999999999999999999965
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=3.5e-27 Score=248.14 Aligned_cols=387 Identities=24% Similarity=0.262 Sum_probs=216.6
Q ss_pred cccEEeccCCcccccCCchhhcccccceeeccCceeecccCcccCCCCCCcEEEccC-CcccccCchhhccCCCccEEEc
Q 001171 316 VLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVAN-NSLSGLVPDEIAKCSLLQMFDL 394 (1133)
Q Consensus 316 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L 394 (1133)
.-.+++|..|+|+.|+|.+|+.+++|++||||+|+|+.+-|++|..+.+|..|.+-+ |+|+.+..+.|.++..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 345677777888888888888888888888888888877778888887777766655 7787777777888888888888
Q ss_pred cCCcccccCCCccCCCCCCcEEEccCCcCccccCccccCccccceeeccccccc------------ccCChhhcCCCCCc
Q 001171 395 EGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIR------------GNIPEEITRLSNLT 462 (1133)
Q Consensus 395 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~------------~~~~~~l~~l~~L~ 462 (1133)
.-|++.......|..+++|..|.+..|.+..+--.+|..+..++.+.+..|.+- ...|-.++...-..
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 888887777777777888888888888777554457777777888877777621 12222233333233
Q ss_pred EEecccCcCCCCCCCCCCCC-CCCcEEEcccCCCccccC-CCcCCcccccEEeccccCCCCCCChhccCCCCCcEeeccC
Q 001171 463 TLNLSYNKFGGKVPYDVGNL-KGLLVLNLSASGFSGKIP-GSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEE 540 (1133)
Q Consensus 463 ~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 540 (1133)
-..+.++++..+.+..|... +.+..--.+.....+..| ..|..+++|++|+|++|+|+.+-+.+|.+..++++|.|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 33334444433333222211 111111111111222222 2355556666666666666655555555666666666666
Q ss_pred CcccccCCCCCCCCccCcEEEcccccccCCCCcccccccccceeecccCccCC-----CCCccc-----------cCCCC
Q 001171 541 NNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISG-----MIPAEL-----------GACSA 604 (1133)
Q Consensus 541 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-----~~p~~l-----------~~l~~ 604 (1133)
|+|...-...|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|.+.- -+.+|+ ++...
T Consensus 308 N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~ 387 (498)
T KOG4237|consen 308 NKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGF 387 (498)
T ss_pred chHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCch
Confidence 66554444555556666666666666665555555555556666555554320 000111 11123
Q ss_pred ccEEEecCCcccC---CCccccccc---------cccCeee-cCCCcccCcCchhhhccCCCcEEEeecCCCCccCCccc
Q 001171 605 LEVLELRSNHFTG---NIPVDISHL---------SRIKKLD-LGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESF 671 (1133)
Q Consensus 605 L~~L~L~~N~l~~---~~p~~l~~l---------~~L~~L~-Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 671 (1133)
++.+.++.+.+.. ..|++.+.. +-+.+.. -|++.+. .+|..+- ..-..|++.+|.++ .+|..
T Consensus 388 ~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~- 462 (498)
T KOG4237|consen 388 VRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE- 462 (498)
T ss_pred hccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH-
Confidence 4444444443321 122221111 1121111 1222222 3332221 12345667777777 45554
Q ss_pred cCcccccccccccccccccCCccccccccCcccccccc
Q 001171 672 SKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRN 709 (1133)
Q Consensus 672 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 709 (1133)
.+.+| .+|+|+|+++..--..+.++++|.+|-||+|
T Consensus 463 -~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 463 -LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred -HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 45566 7777777776555556677777777777765
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=9e-27 Score=245.11 Aligned_cols=405 Identities=24% Similarity=0.289 Sum_probs=262.3
Q ss_pred CccCccCCcceEEEccCCcCCCCCCCCCCCCCcCcEEeccCCcCCCCCcccccCccccceEeccc-ccccCCCCccccCc
Q 001171 158 KISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDS-NHLYGTLPSAISNC 236 (1133)
Q Consensus 158 ~~~~~~~~~l~~L~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l 236 (1133)
.||.++|+....++|..|+|+.+.|+.|+.+++|+.||||+|+|+.+-|+.|..+.+|..|-+-+ |+|+..-...|.+|
T Consensus 60 eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL 139 (498)
T KOG4237|consen 60 EVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGL 139 (498)
T ss_pred cCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhH
Confidence 68999999999999999999999999999999999999999999999999999999998887765 99985444679999
Q ss_pred cccceeeccccccCCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccc----------
Q 001171 237 SSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVV---------- 306 (1133)
Q Consensus 237 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~---------- 306 (1133)
.+|+.|.+.-|++.-+..+.|..+++|..|.+..|.+.. ++. ..|..+.+++.+.+..|.+-..=
T Consensus 140 ~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~-i~~----~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a 214 (498)
T KOG4237|consen 140 SSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQS-ICK----GTFQGLAAIKTLHLAQNPFICDCNLPWLADDLA 214 (498)
T ss_pred HHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhh-hcc----ccccchhccchHhhhcCccccccccchhhhHHh
Confidence 999999999999998888899999999999999999974 333 13478899999999988843210
Q ss_pred -cCCCCCccccccEEeccCCcccccCCchhhcc-cccceeeccCceeecccC-cccCCCCCCcEEEccCCcccccCchhh
Q 001171 307 -KPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNV-TSLRVMDLSGNFFSGNLP-AAVGSLDKLEVLRVANNSLSGLVPDEI 383 (1133)
Q Consensus 307 -~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~ 383 (1133)
.+..+.+..-..-..+.++++..+.+..|... .++..=..+.....++-| ..|+.|++|++|+|++|+|+.+-+.+|
T Consensus 215 ~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aF 294 (498)
T KOG4237|consen 215 MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAF 294 (498)
T ss_pred hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhh
Confidence 01112222223334566666666655555432 222211122222222334 357777777777777777777777777
Q ss_pred ccCCCccEEEccCCcccccCCCccCCCCCCcEEEccCCcCccccCccccCccccceeecccccccccC-----Chhh---
Q 001171 384 AKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNI-----PEEI--- 455 (1133)
Q Consensus 384 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~-----~~~l--- 455 (1133)
.+...+++|.|..|+|..+-...|.++.+|+.|+|.+|+|+...|.+|..+..|.+|+|-.|.+--.- -+++
T Consensus 295 e~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~ 374 (498)
T KOG4237|consen 295 EGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKK 374 (498)
T ss_pred cchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhC
Confidence 77777777777777777666667777777777777777777777777777777777777666543210 0111
Q ss_pred --------cCCCCCcEEecccCcCCC---CCCCCCCCCCCCcEEEcccCCCccccCCCcCCccccc-EEeccccCCCCCC
Q 001171 456 --------TRLSNLTTLNLSYNKFGG---KVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLMRLT-TLDLSNQNLSGEL 523 (1133)
Q Consensus 456 --------~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~ 523 (1133)
..-..++.+.++++.+.. ..|++.+-. -+..-| ..++-+. ....|+..+. .+
T Consensus 375 ~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~------------~s~~cP---~~c~c~~tVvRcSnk~lk-~l 438 (498)
T KOG4237|consen 375 SVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCL------------TSSPCP---PPCTCLDTVVRCSNKLLK-LL 438 (498)
T ss_pred CCCCCCCCCCCchhccccchhccccccccCCccccCCC------------CCCCCC---CCcchhhhhHhhcccchh-hc
Confidence 111234444444443321 111111100 000011 1122222 2233333333 33
Q ss_pred ChhccCCCCCcEeeccCCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccccceeecccC
Q 001171 524 PIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHN 589 (1133)
Q Consensus 524 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 589 (1133)
|..+- ..-.+|++.+|.++ .+|.. .+..| .+|+++|++...-...|.++.+|.+|-|++|
T Consensus 439 p~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 439 PRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred CCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 33221 13456677777776 34443 45556 7777777777555566777777777777765
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.5e-23 Score=273.61 Aligned_cols=341 Identities=24% Similarity=0.287 Sum_probs=208.4
Q ss_pred cCCchhhcccccceeeccCce------eecccCcccCCCC-CCcEEEccCCcccccCchhhccCCCccEEEccCCccccc
Q 001171 330 VFPSWLTNVTSLRVMDLSGNF------FSGNLPAAVGSLD-KLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQ 402 (1133)
Q Consensus 330 ~~~~~~~~l~~L~~L~Ls~N~------l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 402 (1133)
+.++.|.++.+|+.|.+..+. +...+|..|..++ +|+.|++.++.++.+ |..| ...+|+.|+|++|++. .
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~l-P~~f-~~~~L~~L~L~~s~l~-~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCM-PSNF-RPENLVKLQMQGSKLE-K 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCC-CCcC-CccCCcEEECcCcccc-c
Confidence 456678888888888886553 2334566666654 588888888777643 5555 4577888888888776 4
Q ss_pred CCCccCCCCCCcEEEccCCcCccccCccccCccccceeecccccccccCChhhcCCCCCcEEecccCcCCCCCCCCCCCC
Q 001171 403 VPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNL 482 (1133)
Q Consensus 403 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 482 (1133)
++..+..+++|+.|+|+++...+.+| .+..+++|++|+|++|.....+|..+.++++|+.|++++|..-+.+|..+ ++
T Consensus 626 L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l 703 (1153)
T PLN03210 626 LWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NL 703 (1153)
T ss_pred cccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CC
Confidence 56666777788888887765444555 36677778888887776555677777777778888877764444555544 67
Q ss_pred CCCcEEEcccCCCccccCCCcCCcccccEEeccccCCCCCCChhccCCCCCcEeeccCCccc-------ccCCCCCCCCc
Q 001171 483 KGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLS-------GDVPEGFSSLV 555 (1133)
Q Consensus 483 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-------~~~~~~~~~l~ 555 (1133)
++|+.|++++|.....+|.. ..+|+.|++++|.+. .+|..+ .+++|++|++.++... ...+..+...+
T Consensus 704 ~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~ 778 (1153)
T PLN03210 704 KSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSP 778 (1153)
T ss_pred CCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccc
Confidence 77777777777554444432 346777777777765 455443 4666777766654321 11111122234
Q ss_pred cCcEEEcccccccCCCCcccccccccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecC
Q 001171 556 GLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLG 635 (1133)
Q Consensus 556 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 635 (1133)
+|+.|+|++|...+.+|..++++++|+.|+|++|..-+.+|..+ .+++|+.|++++|.....+|.. ..+|+.|+|+
T Consensus 779 sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls 854 (1153)
T PLN03210 779 SLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLS 854 (1153)
T ss_pred cchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECC
Confidence 56666666665555566666666666666666654333455444 4566666666665443333332 2456666666
Q ss_pred CCcccCcCchhhhccCCCcEEEeecCCCCccCCccccCcccccccccccc
Q 001171 636 QNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTN 685 (1133)
Q Consensus 636 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 685 (1133)
+|.++ .+|..+..+++|+.|++++|+-...+|..+..+++|+.+++++|
T Consensus 855 ~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 855 RTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 66665 45666666666666666553322245555555666666666555
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=2.7e-23 Score=271.13 Aligned_cols=341 Identities=19% Similarity=0.232 Sum_probs=269.6
Q ss_pred cCcccCCCCCCcEEEccCCcc------cccCchhhccCC-CccEEEccCCcccccCCCccCCCCCCcEEEccCCcCcccc
Q 001171 355 LPAAVGSLDKLEVLRVANNSL------SGLVPDEIAKCS-LLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLI 427 (1133)
Q Consensus 355 ~p~~~~~l~~L~~L~L~~n~l------~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 427 (1133)
.+.+|..+.+|+.|.+.++.. ...+|..+..++ +|+.|++.+|.++ .+|..| ...+|+.|+|.+|++.. +
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~-L 626 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEK-L 626 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccc-c
Confidence 446788899999999976643 334566676664 6999999999987 567666 46899999999999884 5
Q ss_pred CccccCccccceeecccccccccCChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEEcccCCCccccCCCcCCcc
Q 001171 428 PLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLM 507 (1133)
Q Consensus 428 p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 507 (1133)
+..+..+++|+.|+|++|.....+| .+..+++|++|+|++|.....+|..++.+++|+.|++++|..-..+|..+ +++
T Consensus 627 ~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~ 704 (1153)
T PLN03210 627 WDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLK 704 (1153)
T ss_pred ccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCC
Confidence 7778899999999999876544566 47889999999999987767889999999999999999976555677665 789
Q ss_pred cccEEeccccCCCCCCChhccCCCCCcEeeccCCcccccCCCCCCCCccCcEEEccccccc-------CCCCcccccccc
Q 001171 508 RLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFT-------GDIPATYGFLRS 580 (1133)
Q Consensus 508 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-------~~~~~~~~~l~~ 580 (1133)
+|+.|++++|.....+|.. .++|++|++++|.+. .+|..+ .+++|++|++.++... ...+..+...++
T Consensus 705 sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~s 779 (1153)
T PLN03210 705 SLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPS 779 (1153)
T ss_pred CCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhcccc
Confidence 9999999998766566643 467899999999987 456554 5788888888774422 122223344578
Q ss_pred cceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCchhhhccCCCcEEEeec
Q 001171 581 LVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDM 660 (1133)
Q Consensus 581 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 660 (1133)
|+.|+|++|.....+|..++++++|+.|++++|...+.+|..+ .+++|+.|+|++|.....+|.. ..+|+.|+|++
T Consensus 780 L~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~ 855 (1153)
T PLN03210 780 LTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSR 855 (1153)
T ss_pred chheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCC
Confidence 9999999998877899999999999999999886555678766 6899999999998655455543 36889999999
Q ss_pred CCCCccCCccccCcccccccccccccccccCCccccccccCccccccccc
Q 001171 661 NSLSGRIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNN 710 (1133)
Q Consensus 661 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~ 710 (1133)
|.++ .+|..+..+++|+.|+|++|+--..+|..+..+++|+.++++++.
T Consensus 856 n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 856 TGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 9998 688899999999999999854334688888899999999999875
No 417
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.90 E-value=8.5e-24 Score=256.87 Aligned_cols=336 Identities=22% Similarity=0.314 Sum_probs=180.0
Q ss_pred cccCchhHHHHHHHHHHhCCCCCCCccC----CCCCCCCCCCccce----------------eeeCCCceEEEeeCCccc
Q 001171 24 QNAVVLSEIQALTSFKLHLKDPLGALDG----WDSSTPSAPCDWRG----------------IVCYNNRVRELRLPRLQL 83 (1133)
Q Consensus 24 ~~~~~~~~~~~l~~~k~~~~~~~~~l~~----w~~~~~~~~c~w~g----------------v~c~~~~v~~l~l~~~~l 83 (1133)
..+...+|.+.+++..+.+.-| +.+++ |+..+ ++|.=.. |.|.++.|+.+...+...
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~p-~~~~~~~~~~~~~~--~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~ 133 (754)
T PRK15370 57 PETASPEEIKSKFECLRMLAFP-AYADNIQYSRGGAD--QYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQ 133 (754)
T ss_pred CCCCCHHHHHHHHHHHHHhcCC-chhhccccccCCCC--cccccCCcchhhheeeecCCceEEecCCCcccccccccccc
Confidence 3455668999999999999766 44544 97654 6885444 889999999888765332
Q ss_pred Ccccchh--hcccccCcEEEcccCcccCC----------CCccccCCCCcceEeccCCcccCcCCCccccccchhhhhhc
Q 001171 84 AGRLTDQ--LADLHELRKLSLHSNHLNGS----------IPASLHQCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVA 151 (1133)
Q Consensus 84 ~g~~~~~--l~~l~~L~~L~l~~n~l~~~----------~p~~~~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~l~ 151 (1133)
+..-..+ ..+...... +-..+.-.+. +..+ ...+...|+++++.++ .+|..+. ++|+.|+|+
T Consensus 134 ~~~~~~~~~~~~~~~~w~-~w~~~~~~~~~~~r~~a~~r~~~C--l~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls 207 (754)
T PRK15370 134 ASSASGSKDAVNYELIWS-EWVKEAPAKEAANREEAVQRMRDC--LKNNKTELRLKILGLT-TIPACIP--EQITTLILD 207 (754)
T ss_pred cccCCCCCChhhHHHHHH-HHHhcCCCCccccHHHHHHHHHhh--cccCceEEEeCCCCcC-cCCcccc--cCCcEEEec
Confidence 2221100 000000000 0000000000 0111 1134556666666666 4555443 356666666
Q ss_pred ccccCCCccCccCCcceEEEccCCcCCCCCCCCCCCCCcCcEEeccCCcCCCCCcccccCccccceEecccccccCCCCc
Q 001171 152 HNLLSGKISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPS 231 (1133)
Q Consensus 152 ~N~l~~~~~~~~~~~l~~L~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 231 (1133)
+|.|+ .+|..++++|++|+|++|+|++ +|..+. .+|+.|+|++|++. .+|..+. .+|+.|++++|+++ .+|.
T Consensus 208 ~N~Lt-sLP~~l~~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~ 279 (754)
T PRK15370 208 NNELK-SLPENLQGNIKTLYANSNQLTS-IPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPE 279 (754)
T ss_pred CCCCC-cCChhhccCCCEEECCCCcccc-CChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-cccc
Confidence 66666 3555555667777777777763 454432 35677777777776 5665554 46777777777776 4565
Q ss_pred cccCccccceeeccccccCCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCC
Q 001171 232 AISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNG 311 (1133)
Q Consensus 232 ~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~ 311 (1133)
.+. ++|+.|++++|+|+++ |..+. ++|+.|++++|+++. +|..+ .++|+.|++++|.+++
T Consensus 280 ~l~--~sL~~L~Ls~N~Lt~L-P~~lp--~sL~~L~Ls~N~Lt~-LP~~l-------~~sL~~L~Ls~N~Lt~------- 339 (754)
T PRK15370 280 NLP--EELRYLSVYDNSIRTL-PAHLP--SGITHLNVQSNSLTA-LPETL-------PPGLKTLEAGENALTS------- 339 (754)
T ss_pred ccC--CCCcEEECCCCccccC-cccch--hhHHHHHhcCCcccc-CCccc-------cccceeccccCCcccc-------
Confidence 553 4677777777777653 33332 367777777777764 33222 1334444444444433
Q ss_pred CccccccEEeccCCcccccCCchhhcccccceeeccCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccE
Q 001171 312 RCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQM 391 (1133)
Q Consensus 312 ~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 391 (1133)
+ |..+ .++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+.+ |..+. ..|+.
T Consensus 340 ------------------L-P~~l--~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~L-P~~l~--~sL~~ 392 (754)
T PRK15370 340 ------------------L-PASL--PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTNL-PENLP--AALQI 392 (754)
T ss_pred ------------------C-Chhh--cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCCC-CHhHH--HHHHH
Confidence 2 2222 134555555555554 2343331 3555555555555532 33332 24556
Q ss_pred EEccCCcccccCCC----ccCCCCCCcEEEccCCcCc
Q 001171 392 FDLEGNRFSGQVPA----FLGGIRGLKIVSLGRNMFS 424 (1133)
Q Consensus 392 L~Ls~N~l~~~~p~----~l~~l~~L~~L~L~~N~l~ 424 (1133)
|++++|+|+ .+|. .++.++.+..|++.+|.++
T Consensus 393 LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 393 MQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 666666665 2332 3334456666777776665
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=3e-23 Score=249.87 Aligned_cols=264 Identities=27% Similarity=0.355 Sum_probs=152.3
Q ss_pred eEEEccCCcCCCCCCCCCCCCCcCcEEeccCCcCCCCCcccccCccccceEecccccccCCCCccccCccccceeecccc
Q 001171 168 RYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDN 247 (1133)
Q Consensus 168 ~~L~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N 247 (1133)
..|+|++|.|+ .+|..+. ++|+.|++++|+|+. +|.. +++|++|+|++|+|+ .+|.. .++|++|++++|
T Consensus 204 ~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N 272 (788)
T PRK15387 204 AVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSN 272 (788)
T ss_pred cEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccCC
Confidence 34455555554 3344332 244555555555542 3321 244555555555554 33321 234455555555
Q ss_pred ccCCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCccccccEEeccCCcc
Q 001171 248 VLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRI 327 (1133)
Q Consensus 248 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i 327 (1133)
.++.+ |.. .++|+.|+|++|+++. +|. .+++|+.|++++|.+++... ....|+.|++++|+|
T Consensus 273 ~L~~L-p~l---p~~L~~L~Ls~N~Lt~-LP~--------~p~~L~~LdLS~N~L~~Lp~-----lp~~L~~L~Ls~N~L 334 (788)
T PRK15387 273 PLTHL-PAL---PSGLCKLWIFGNQLTS-LPV--------LPPGLQELSVSDNQLASLPA-----LPSELCKLWAYNNQL 334 (788)
T ss_pred chhhh-hhc---hhhcCEEECcCCcccc-ccc--------cccccceeECCCCccccCCC-----CcccccccccccCcc
Confidence 55432 211 1344455555555542 221 12345555555555554311 123456666666666
Q ss_pred cccCCchhhcccccceeeccCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcccccCCCcc
Q 001171 328 RAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFL 407 (1133)
Q Consensus 328 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 407 (1133)
+++ |.. ..+|++|+|++|+|++ +|.. ..+|+.|++++|+|+. +|.. ..+|+.|+|++|+|++ +|..
T Consensus 335 ~~L-P~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l- 400 (788)
T PRK15387 335 TSL-PTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL- 400 (788)
T ss_pred ccc-ccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc-
Confidence 665 321 2467777777777773 4432 2456677777777775 3432 2467888888888874 4443
Q ss_pred CCCCCCcEEEccCCcCccccCccccCccccceeecccccccccCChhhcCCCCCcEEecccCcCCCCCCCCCCC
Q 001171 408 GGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGN 481 (1133)
Q Consensus 408 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 481 (1133)
.++|+.|++++|.+++ +|.. ..+|+.|++++|+|+ .+|..+.++++|+.|+|++|+|++..+..+..
T Consensus 401 --~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 401 --PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred --ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 3568888888888885 4543 346788999999998 67888999999999999999999877665543
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=5e-23 Score=248.06 Aligned_cols=266 Identities=28% Similarity=0.322 Sum_probs=175.1
Q ss_pred CcEEEcccCcccCCCCccccCCCCcceEeccCCcccCcCCCccccccchhhhhhcccccCCCccCccCCcceEEEccCCc
Q 001171 97 LRKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISADISPSLRYLDLSSNA 176 (1133)
Q Consensus 97 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~Ls~N~ 176 (1133)
-..|+|++|+|+ .+|..+. ++|+.|++++|+++ .+|.. +++|++|++++|+|+. +|. .+++|+.|+|++|.
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~-lp~sL~~L~Ls~N~ 273 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPV-LPPGLLELSIFSNP 273 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccC-cccccceeeccCCc
Confidence 345666666666 5565554 35666666666666 35542 4566666666666663 332 45677777777777
Q ss_pred CCCCCCCCCCCCCcCcEEeccCCcCCCCCcccccCccccceEecccccccCCCCccccCccccceeeccccccCCCCCCc
Q 001171 177 FTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGT 256 (1133)
Q Consensus 177 ~~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~ 256 (1133)
++. +|..+ .+|+.|++++|+++ .+|.. +++|++|+|++|++++ +|... ++|+.|++++|+|+++ |..
T Consensus 274 L~~-Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~L-P~l 340 (788)
T PRK15387 274 LTH-LPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTSL-PTL 340 (788)
T ss_pred hhh-hhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCccccc-ccc
Confidence 763 33322 45667777777776 35542 3567777777777763 44422 3566777777777653 321
Q ss_pred ccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCccccccEEeccCCcccccCCchhh
Q 001171 257 IGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLT 336 (1133)
Q Consensus 257 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~ 336 (1133)
..+|++|+|++|+|++ +|.. .++|+.|++++|.++++. ..++.|+.|++++|+|+.+++ .
T Consensus 341 ---p~~Lq~LdLS~N~Ls~-LP~l--------p~~L~~L~Ls~N~L~~LP-----~l~~~L~~LdLs~N~Lt~LP~-l-- 400 (788)
T PRK15387 341 ---PSGLQELSVSDNQLAS-LPTL--------PSELYKLWAYNNRLTSLP-----ALPSGLKELIVSGNRLTSLPV-L-- 400 (788)
T ss_pred ---ccccceEecCCCccCC-CCCC--------CcccceehhhccccccCc-----ccccccceEEecCCcccCCCC-c--
Confidence 2467777777777774 3321 245667777777777532 123568888888888887643 2
Q ss_pred cccccceeeccCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcccccCCCccCCC
Q 001171 337 NVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGI 410 (1133)
Q Consensus 337 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 410 (1133)
.++|+.|++++|+|+. +|.. ..+|+.|++++|+|+ .+|..+.++++|+.|+|++|+|++..+..+..+
T Consensus 401 -~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 401 -PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred -ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 3678889999999884 5653 346788999999998 468888999999999999999998877766443
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=1.4e-23 Score=266.23 Aligned_cols=199 Identities=17% Similarity=0.225 Sum_probs=137.1
Q ss_pred hccC-CCeeeEEEEEeCC------CCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCce
Q 001171 888 KVKH-RNLTVLRGYYAGP------PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMV 960 (1133)
Q Consensus 888 ~l~h-pniv~l~~~~~~~------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~iv 960 (1133)
.++| +||+.+++++... ....+.++||+ +++|.+++... ...+++..+..++.||++||+|||++||+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHSQGIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4455 5777777776221 13346788887 67999999742 23488999999999999999999999999
Q ss_pred ecccCccceeeCC-------------------CCceEEeccCcccccccCCC-------C------CCCCCCCCCCCCcc
Q 001171 961 HGDIKPQNVLFDA-------------------DFEAHLSEFGLDRLAIATPA-------E------ASSSTTPIGSLGYV 1008 (1133)
Q Consensus 961 H~Dlkp~NIll~~-------------------~~~~kl~Dfg~a~~~~~~~~-------~------~~~~~~~~gt~~y~ 1008 (1133)
||||||+|||++. ++.+|++|||+++....... . ........||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999954 44556666666653211000 0 00111246889999
Q ss_pred CccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHh
Q 001171 1009 SPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVK 1088 (1133)
Q Consensus 1009 aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1088 (1133)
|||++.+..++.++|||||||++|||++|..|+... ......+... . .++.. ........+
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~--~~~~~~~~~~----~----~~~~~---------~~~~~~~~~ 243 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK--SRTMSSLRHR----V----LPPQI---------LLNWPKEAS 243 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH--HHHHHHHHHh----h----cChhh---------hhcCHHHHH
Confidence 999999999999999999999999999998886421 1111111111 0 01100 001112236
Q ss_pred hhhccCCCCCCCCCCHHHHHHH
Q 001171 1089 VGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1089 li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
++.+||+++|.+||++.|++++
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHhCCCChhhCcChHHHhhc
Confidence 7788999999999999999865
No 421
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.88 E-value=3.5e-22 Score=205.74 Aligned_cols=168 Identities=20% Similarity=0.176 Sum_probs=124.7
Q ss_pred CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCC
Q 001171 918 GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASS 997 (1133)
Q Consensus 918 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 997 (1133)
|+|.++++..+ ..+++..++.++.||+.||+|||+.+ ||+||+++.++.+++ ||.++.....
T Consensus 1 GsL~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVRG----RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc------
Confidence 68999997632 34899999999999999999999998 999999999999999 9998654221
Q ss_pred CCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCCh-hhHHHHHHHHhhhccccccccCCcCCCCCC
Q 001171 998 STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQD-EDIVKWVKKQLQRGQISELLEPGLLELDPE 1076 (1133)
Q Consensus 998 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1133)
...|++.|||||++.+..++.++|||||||++|||++|+.||..... ......+....... ++... ..
T Consensus 63 --~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~ 131 (176)
T smart00750 63 --QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD------DPRDR---SN 131 (176)
T ss_pred --cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC------Ccccc---cc
Confidence 12588999999999999999999999999999999999999964332 12222222211110 00000 01
Q ss_pred ChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1077 SSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1077 ~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
.....+.....+++.+||+.||++||++.|+++++...
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 11111111234899999999999999999999998764
No 422
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=3.3e-22 Score=223.89 Aligned_cols=175 Identities=19% Similarity=0.195 Sum_probs=132.3
Q ss_pred HhcCCCcccccccccceeEEEEEEC--CceEEEEEEcccCC------cCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCC
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ--DGMVLSIRRLRDGT------IDENTFRKEAEALGKVKHRNLTVLRGYYAGPPD 906 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 906 (1133)
..++|.+.++||+|+||+||+|+++ +++.||||++.... ...+.+.+|++++++++|+|++..+..+ .
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 4568999999999999999999775 57888999875321 1245689999999999999998533222 2
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceeccc-CccceeeCCCCceEEeccCcc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI-KPQNVLFDADFEAHLSEFGLD 985 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dl-kp~NIll~~~~~~kl~Dfg~a 985 (1133)
..++||||+++++|... .. .. ...++.++++||+|||++||+|||| ||+||+++.++.++|+|||+|
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~--------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP--------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc--------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 24899999999999632 11 01 1356789999999999999999999 999999999999999999999
Q ss_pred cccccCCCCCC-----CCCCCCCCCCccCccccCCCC------CCCCCchh
Q 001171 986 RLAIATPAEAS-----SSTTPIGSLGYVSPEAASTGQ------PTKEADVY 1025 (1133)
Q Consensus 986 ~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~Dvw 1025 (1133)
+.......... ......+++.|+|||++...+ .+..+|-|
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 86644322111 124567888999999986432 23445666
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=4.3e-21 Score=216.86 Aligned_cols=264 Identities=19% Similarity=0.220 Sum_probs=193.2
Q ss_pred CCCcccccccccceeEEEEEECC--ceEEEEEEcccCCcC-HHHHHHHHHHHhhccC----CCeeeEEEEEeCCCCcEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQD--GMVLSIRRLRDGTID-ENTFRKEAEALGKVKH----RNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h----pniv~l~~~~~~~~~~~~l 910 (1133)
+|.+.+.||+|+||.||.|.... ...+|+|........ ...+..|..++..+.. +++..+++.....+.+.++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999997754 357888887653222 2278889999999973 5888888877534456799
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC-----CceEEeccCcc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD-----FEAHLSEFGLD 985 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~-----~~~kl~Dfg~a 985 (1133)
||+.+ |.+|.++..... ...++..+...++.|++.+|+++|+.|++||||||.|+++... ..+.+.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 889999887654 3558999999999999999999999999999999999999765 35899999999
Q ss_pred c--ccccCCCC---CCC--CCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhh
Q 001171 986 R--LAIATPAE---ASS--STTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQ 1058 (1133)
Q Consensus 986 ~--~~~~~~~~---~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 1058 (1133)
+ ........ ... .....||.+|++++...+...+++.|+||++.++.|+..|..||...........+.+...
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8 33222211 111 2345699999999999999999999999999999999999999965543333333333222
Q ss_pred hccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCcCCC
Q 001171 1059 RGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGP 1118 (1133)
Q Consensus 1059 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~~~~ 1118 (1133)
...... . ......++. ++...+-..+..++|....+...++......
T Consensus 255 ~~~~~~-----~-----~~~~~~~~~---~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 255 KLLTDR-----F-----GDLKPEEFA---KILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hhcccc-----c-----cCCChHHHH---HHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 211111 0 001111222 2222233478899999999999887665543
No 424
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=2.8e-22 Score=243.71 Aligned_cols=256 Identities=28% Similarity=0.436 Sum_probs=124.3
Q ss_pred ccceeeeCCCceEEEeeCCcccCcccchhhcccccCcEEEcccCcccCCCCccccCCCCcceEeccCCcccCcCCCcccc
Q 001171 62 DWRGIVCYNNRVRELRLPRLQLAGRLTDQLADLHELRKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFN 141 (1133)
Q Consensus 62 ~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~~~g~~p~~l~~ 141 (1133)
-|+...|-..+++.|++.+.+++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|.
T Consensus 169 ~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~---- 237 (754)
T PRK15370 169 VQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPA---- 237 (754)
T ss_pred HHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCCh----
Confidence 344455655555566665555543 333222 34555555555555 3444332 35555555555555 3443
Q ss_pred ccchhhhhhcccccCCCccCccCCcceEEEccCCcCCCCCCCCCCCCCcCcEEeccCCcCCCCCcccccCccccceEecc
Q 001171 142 LTNLLVLNVAHNLLSGKISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLD 221 (1133)
Q Consensus 142 l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~ 221 (1133)
.++++|+.|+|++|+++ .+|..+. ++|++|++++|+++ .+|..+. .+|+.|+++
T Consensus 238 --------------------~l~~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls 291 (754)
T PRK15370 238 --------------------TLPDTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVY 291 (754)
T ss_pred --------------------hhhccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECC
Confidence 34444555555555554 3344332 34555555555555 3444432 355555555
Q ss_pred cccccCCCCccccCccccceeeccccccCCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCc
Q 001171 222 SNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNA 301 (1133)
Q Consensus 222 ~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~ 301 (1133)
+|+|+ .+|..+. ++|++|++++|+++.+ |..+ .++|+.|++++|.+++ +|..+ .++|+.|++++|.
T Consensus 292 ~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~L-P~~l--~~sL~~L~Ls~N~Lt~-LP~~l-------~~sL~~L~Ls~N~ 357 (754)
T PRK15370 292 DNSIR-TLPAHLP--SGITHLNVQSNSLTAL-PETL--PPGLKTLEAGENALTS-LPASL-------PPELQVLDVSKNQ 357 (754)
T ss_pred CCccc-cCcccch--hhHHHHHhcCCccccC-Cccc--cccceeccccCCcccc-CChhh-------cCcccEEECCCCC
Confidence 55555 3343332 3455566666666543 2222 1456666666666654 33322 1344555555554
Q ss_pred ccccccCCCCCccccccEEeccCCcccccCCchhhcccccceeeccCceeecccCcc----cCCCCCCcEEEccCCccc
Q 001171 302 FTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAA----VGSLDKLEVLRVANNSLS 376 (1133)
Q Consensus 302 l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~n~l~ 376 (1133)
++... . .....|++|+|++|+|+.+++ .+. .+|+.|++++|+|. .+|.. ++.++.+..|+|.+|.++
T Consensus 358 L~~LP--~--~lp~~L~~LdLs~N~Lt~LP~-~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 358 ITVLP--E--TLPPTITTLDVSRNALTNLPE-NLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcCC--h--hhcCCcCEEECCCCcCCCCCH-hHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 44221 0 012345666666666665533 232 24666666666665 33332 222344555555555543
No 425
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.85 E-value=4.3e-22 Score=199.25 Aligned_cols=247 Identities=25% Similarity=0.382 Sum_probs=183.7
Q ss_pred CCcccccccccceeEEEEEECCceEEEEEEcccCCc---CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTI---DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
..+.-+|.+...|+.|+|+|+.+ .+++|++..... -.++|..|.-.++-..||||..++|.|..+++. .++..||
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnl-v~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNL-VIISQYM 269 (448)
T ss_pred hhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCc-eEeeeec
Confidence 34556788999999999999844 445566643222 246799999999999999999999999988655 8999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCC--ceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD--MVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
+.|+|+..++... +-..+-.+..+++.+||+|++|||+.. |..--+.+..|++|++..++|. .+-+++..
T Consensus 270 p~gslynvlhe~t---~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsf---- 341 (448)
T KOG0195|consen 270 PFGSLYNVLHEQT---SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSF---- 341 (448)
T ss_pred cchHHHHHHhcCc---cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeee----
Confidence 9999999998643 345777889999999999999999875 4445688999999999988874 11112111
Q ss_pred CCCCCCCCCCCCCccCccccCCCCC---CCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCc
Q 001171 994 EASSSTTPIGSLGYVSPEAASTGQP---TKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGL 1070 (1133)
Q Consensus 994 ~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1133)
......-.+.||+||.++.... -+++|+|||++++||+.|...||...++.+.--.+.-.. +...+.|+.
T Consensus 342 ---qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg----lrv~ippgi 414 (448)
T KOG0195|consen 342 ---QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG----LRVHIPPGI 414 (448)
T ss_pred ---eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc----ccccCCCCc
Confidence 1122345678999999976653 467899999999999999999998777665443332211 111222222
Q ss_pred CCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcC
Q 001171 1071 LELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGC 1114 (1133)
Q Consensus 1071 ~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~ 1114 (1133)
. ....+++.-|+..||.+||.+..|+-.||+.
T Consensus 415 s------------~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 415 S------------RHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred c------------HHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 1 1112677889999999999999999999874
No 426
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=3.9e-21 Score=189.79 Aligned_cols=214 Identities=18% Similarity=0.234 Sum_probs=169.7
Q ss_pred HHhcCCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcCHHHHHHHHHHHhhccCC-CeeeEEEEEeCCCCcEEEE
Q 001171 834 EATRQFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHR-NLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 834 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp-niv~l~~~~~~~~~~~~lV 911 (1133)
....+|.++++||.|+||.+|.|.. .+|+.||||.-..... ...+..|.++++.+++- .|..+..|..+. .+-.+|
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-hpqL~yEskvY~iL~~g~GiP~i~~y~~e~-~ynvlV 89 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-HPQLLYESKVYRILQGGVGIPHIRHYGTEK-DYNVLV 89 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-CcchhHHHHHHHHhccCCCCchhhhhcccc-ccceee
Confidence 3456899999999999999999954 6799999998765332 34678899999999763 344444444443 555899
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC---CceEEeccCccccc
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD---FEAHLSEFGLDRLA 988 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~ 988 (1133)
||.. |.+|.++..-..+ .++..+++-++-|++.-++|+|.++++||||||+|+|..-+ ..+.++|||+|+.+
T Consensus 90 MdLL-GPsLEdLfnfC~R----~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCSR----RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred eecc-CccHHHHHHHHhh----hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 9998 8899998876543 38899999999999999999999999999999999999654 45689999999876
Q ss_pred ccCCCC----CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHH
Q 001171 989 IATPAE----ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVK 1054 (1133)
Q Consensus 989 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~ 1054 (1133)
.+.... ........||.+|.+-....+...+.+.|+-|+|.++.+.--|..||.+.....-.+...
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE 234 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE 234 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH
Confidence 554332 223455679999999888888888999999999999999999999998765544443333
No 427
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=5.4e-20 Score=190.07 Aligned_cols=211 Identities=16% Similarity=0.263 Sum_probs=170.7
Q ss_pred CCCcccccccccceeEEEEEE-CCceEEEEEEcccCCcCHHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 838 QFDEENVLSRGRYGLIFKASY-QDGMVLSIRRLRDGTIDENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
.|.++++||+|+||+++.|.. -+++.||||.-+... +.-++..|.+.++.+. .+.|...+-|-.++ -.-.+|+|..
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG-~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG-KYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC-CcchHHHHHHHHHHHcCCCCCCceeeecccc-chhhhhhhhh
Confidence 588999999999999999954 479999999876533 3456888999999985 56776665444443 3337999998
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC-----ceEEeccCccccccc
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF-----EAHLSEFGLDRLAIA 990 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~-----~~kl~Dfg~a~~~~~ 990 (1133)
|-||.|+..-.++ .++..++..+|.|++.-++|+|++..|.|||||+|+||...+ .+.++|||+|+.+.+
T Consensus 107 -GPSLEDLFD~CgR----~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 107 -GPSLEDLFDLCGR----RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred -CcCHHHHHHHhcC----cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 8899999887654 489999999999999999999999999999999999997543 478999999998776
Q ss_pred CCCCCC----CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHH
Q 001171 991 TPAEAS----SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKK 1055 (1133)
Q Consensus 991 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~ 1055 (1133)
...... ......||.+||+-....+++.+++.|+-|+|-++.+.+-|..||.+...+..-+...+
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeK 250 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEK 250 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHH
Confidence 544322 23456799999999999999999999999999999999999999986554443333333
No 428
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=8.8e-19 Score=200.70 Aligned_cols=258 Identities=24% Similarity=0.378 Sum_probs=192.5
Q ss_pred CCcccccccccceeEEEEEECCceEEEEEEcccCCc----CHHHHHHHHHHHhhccCC-CeeeEEEEEeCCCCcEEEEEe
Q 001171 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTI----DENTFRKEAEALGKVKHR-NLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp-niv~l~~~~~~~~~~~~lV~e 913 (1133)
|.+.+.||.|+||.||++... ..+++|.+..... ....+.+|+.+++.+.|+ +++++.+++... ...+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE-GSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC-CEEEEEEe
Confidence 677889999999999999877 7888898865433 256789999999999988 799999999554 33589999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCC-ceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADF-EAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~ 992 (1133)
|+.++++.+++...... ..+.......++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||.++......
T Consensus 79 ~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred cCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999999777653321 2478888999999999999999999999999999999999988 79999999987443322
Q ss_pred CCC---CCCCCCCCCCCccCccccCC---CCCCCCCchhHHHHHHHHHHhCCCCCccCCh----hhHHHHHHHHhhhccc
Q 001171 993 AEA---SSSTTPIGSLGYVSPEAAST---GQPTKEADVYSFGIVLLEILTGRKPVMFTQD----EDIVKWVKKQLQRGQI 1062 (1133)
Q Consensus 993 ~~~---~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~----~~~~~~~~~~~~~~~~ 1062 (1133)
... .......|+..|+|||.+.+ ..+....|+||+|++++++++|..||..... ......+...... ..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 235 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SL 235 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-cc
Confidence 211 13456789999999999987 5788999999999999999999999865543 2333332222111 00
Q ss_pred cccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHH
Q 001171 1063 SELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFM 1110 (1133)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~ 1110 (1133)
........ . ........+++.+|+..+|..|.+..+....
T Consensus 236 ~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 236 ASPLSPSN-------P-ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccCccc-------c-chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000000 0 1111122367888999999999999887764
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=1.4e-20 Score=224.90 Aligned_cols=252 Identities=21% Similarity=0.227 Sum_probs=176.5
Q ss_pred CcccccccccceeEEEEEEC-CceEEEEEEccc---CCcCH----HHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 840 DEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRD---GTIDE----NTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 840 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~---~~~~~----~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
...+++|.|++|.|+.+... ..+..+.|.... ....+ ..+..|+-+-..+.|||++..+..+.+.... +-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~-~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI-LQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc-hhh
Confidence 34578999999988877543 334444443321 11112 1255677788888999998777766554443 444
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccC
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIAT 991 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 991 (1133)
||||++ +|+.++.... .+....+..++.|+..|++|+|+.||.|||+|++|+++..+|.+||+|||.+......
T Consensus 400 mE~~~~-Dlf~~~~~~~-----~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNG-----KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hhcccH-HHHHHHhccc-----ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 999999 9999998642 3667788889999999999999999999999999999999999999999998644322
Q ss_pred CC-CCCCCCCCCCCCCccCccccCCCCCC-CCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCC
Q 001171 992 PA-EASSSTTPIGSLGYVSPEAASTGQPT-KEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPG 1069 (1133)
Q Consensus 992 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1133)
.. ........+|+..|+|||++.+..|. ...||||.|+++..|.+|+.||......+-.. ... ....
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--~~~---------~~~~ 542 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--KTN---------NYSD 542 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--hhh---------cccc
Confidence 22 12445667899999999999988884 56799999999999999999996433222110 000 0000
Q ss_pred cCCCC-CCChhHHHHH-HhHhhhhccCCCCCCCCCCHHHHHH
Q 001171 1070 LLELD-PESSEWEEFL-LGVKVGLLCTAPDPLDRPSMADIVF 1109 (1133)
Q Consensus 1070 ~~~~~-~~~~~~~~~~-~~~~li~~Cl~~dP~~RPs~~evl~ 1109 (1133)
..... ....-+.... ....++.++++.||.+|.++++|++
T Consensus 543 ~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 543 QRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00000 0011111111 1127899999999999999999874
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=8.1e-20 Score=189.59 Aligned_cols=181 Identities=13% Similarity=0.154 Sum_probs=136.3
Q ss_pred CcccHHHHHH--HhcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHH----------HHHHHHHHhhccCC
Q 001171 825 NKITYVETLE--ATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENT----------FRKEAEALGKVKHR 892 (1133)
Q Consensus 825 ~~~~~~~~~~--~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~----------~~~E~~~l~~l~hp 892 (1133)
+...|.+... ...+|...+++|.|+||.||.+.. ++..+|+|.+.......+. +++|++.+.+++||
T Consensus 17 ~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~ 95 (232)
T PRK10359 17 NDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE 95 (232)
T ss_pred CcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC
Confidence 3333444432 567999999999999999999866 4678999999644332222 68999999999999
Q ss_pred CeeeEEEEEeCCC-------CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccC
Q 001171 893 NLTVLRGYYAGPP-------DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIK 965 (1133)
Q Consensus 893 niv~l~~~~~~~~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlk 965 (1133)
+|..+.+++.... ...++||||++|.+|.++.. ++. ....+++.++..+|+.|++|||+|
T Consensus 96 GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~gi~H~Dik 162 (232)
T PRK10359 96 GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQHGMVSGDPH 162 (232)
T ss_pred CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHcCCccCCCC
Confidence 9999998865321 34689999999999987732 222 245589999999999999999999
Q ss_pred ccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHH
Q 001171 966 PQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEIL 1035 (1133)
Q Consensus 966 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~ 1035 (1133)
|+||++++++ ++++|||..+....... ...+.....+..++|+|++|+++....
T Consensus 163 p~Nili~~~g-i~liDfg~~~~~~e~~a---------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 163 KGNFIVSKNG-LRIIDLSGKRCTAQRKA---------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred hHHEEEeCCC-EEEEECCCcccccchhh---------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 9999999988 99999998753311110 011334455678999999999988654
No 431
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=2.2e-20 Score=219.82 Aligned_cols=248 Identities=21% Similarity=0.264 Sum_probs=174.6
Q ss_pred CCCcccccccccceeEEEEEECCceEEEEEEcccC--CcCHHHHHHHHHH--HhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDG--TIDENTFRKEAEA--LGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~E~~~--l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+|...+.+|++.|=.|.+|++++|. |+||++.+. ..+-+.|.++++- ...++|||++++.-+... +...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t-~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVT-DKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHh-hHHHHHHHH
Confidence 5778899999999999999999998 788887543 3344555554443 445589999987655433 344578888
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPA 993 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 993 (1133)
|+ .-+|+|.+... ..+...+...|+.|++.|+.-+|+.||+|||||.+|||++.-.-+.++||..-+...-+.+
T Consensus 102 yv-khnLyDRlSTR-----PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YV-KHNLYDRLSTR-----PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HH-hhhhhhhhccc-----hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 88 56888888753 3367778888999999999999999999999999999999999999999976543332222
Q ss_pred CCCCCCCC----CCCCCccCccccCCC----------C-CCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHh
Q 001171 994 EASSSTTP----IGSLGYVSPEAASTG----------Q-PTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQL 1057 (1133)
Q Consensus 994 ~~~~~~~~----~gt~~y~aPE~~~~~----------~-~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~ 1057 (1133)
.......+ ..-..|.|||.+... . .+++-||||+||+++|+++ |++||.- .+.....-
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L------SQL~aYr~ 249 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL------SQLLAYRS 249 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH------HHHHhHhc
Confidence 22222111 222369999998431 1 4678899999999999999 7888841 11111110
Q ss_pred hhcc-----ccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhcCc
Q 001171 1058 QRGQ-----ISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR 1115 (1133)
Q Consensus 1058 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~~~ 1115 (1133)
.... +.++-|... .+++..|++.||++|.++++.++.-++..
T Consensus 250 ~~~~~~e~~Le~Ied~~~----------------Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 250 GNADDPEQLLEKIEDVSL----------------RNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred cCccCHHHHHHhCcCccH----------------HHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 0000 001111111 16888899999999999999998866644
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=3.3e-19 Score=184.00 Aligned_cols=137 Identities=15% Similarity=0.209 Sum_probs=106.8
Q ss_pred ccccccccceeEEEEEECCceEEEEEEcccCCcC----------HH-----------------HHHHHHHHHhhccCCCe
Q 001171 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID----------EN-----------------TFRKEAEALGKVKHRNL 894 (1133)
Q Consensus 842 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~----------~~-----------------~~~~E~~~l~~l~hpni 894 (1133)
.+.||+|+||.||+|...+|+.||||+++.+... .. ...+|++++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999998888999999999654221 01 22349999999988776
Q ss_pred eeEEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHH-hcCCceecccCccceeeCC
Q 001171 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFL-HSLDMVHGDIKPQNVLFDA 973 (1133)
Q Consensus 895 v~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~ivH~Dlkp~NIll~~ 973 (1133)
.....+... . .++||||++++++....... ..++......++.|++.+++|+ |+.||+||||||+||+++
T Consensus 82 ~~p~~~~~~--~-~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILLK--S-HVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEec--C-CEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-
Confidence 443333222 2 28999999887766543221 2378888999999999999999 799999999999999998
Q ss_pred CCceEEeccCcccc
Q 001171 974 DFEAHLSEFGLDRL 987 (1133)
Q Consensus 974 ~~~~kl~Dfg~a~~ 987 (1133)
++.++++|||+|..
T Consensus 153 ~~~v~LiDFG~a~~ 166 (190)
T cd05147 153 DGKLYIIDVSQSVE 166 (190)
T ss_pred CCcEEEEEcccccc
Confidence 47899999999864
No 433
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=2.5e-18 Score=178.45 Aligned_cols=137 Identities=17% Similarity=0.228 Sum_probs=108.9
Q ss_pred ccccccccceeEEEEEECCceEEEEEEcccCCcC---------------------------HHHHHHHHHHHhhccCCCe
Q 001171 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---------------------------ENTFRKEAEALGKVKHRNL 894 (1133)
Q Consensus 842 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---------------------------~~~~~~E~~~l~~l~hpni 894 (1133)
.+.||+|+||.||+|...+|+.||||++...... ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999998878999999998754211 1123579999999999987
Q ss_pred eeEEEEEeCCCCcEEEEEeccCCCCHHHH-HHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeC
Q 001171 895 TVLRGYYAGPPDVRLLVYDYMPNGNLATL-LQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFD 972 (1133)
Q Consensus 895 v~l~~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~ 972 (1133)
.....+.... .++||||++++++... +.. ..++......++.+++.++.++|+ .||+||||||+||+++
T Consensus 82 ~~p~~~~~~~---~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLKK---NVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEecC---CEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE
Confidence 5554443332 3899999988755433 332 225677888999999999999999 9999999999999998
Q ss_pred CCCceEEeccCccccc
Q 001171 973 ADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 973 ~~~~~kl~Dfg~a~~~ 988 (1133)
++.++++|||+++..
T Consensus 153 -~~~~~liDFG~a~~~ 167 (190)
T cd05145 153 -DGKPYIIDVSQAVEL 167 (190)
T ss_pred -CCCEEEEEcccceec
Confidence 889999999998654
No 434
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=1.1e-18 Score=184.18 Aligned_cols=199 Identities=20% Similarity=0.224 Sum_probs=134.1
Q ss_pred cCCCeeeEEEEEeCC--------------------------CCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHH
Q 001171 890 KHRNLTVLRGYYAGP--------------------------PDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLI 943 (1133)
Q Consensus 890 ~hpniv~l~~~~~~~--------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 943 (1133)
+|||||++.++|.+. +...|+||... ..+|.+++-... .+...+..+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~------~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH------RSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC------CchHHHHHH
Confidence 599999998877431 23458899877 468888887532 455666778
Q ss_pred HHHHHHHHHHHhcCCceecccCccceee--CCCC--ceEEeccCcccccccCC---CCCCCCCCCCCCCCccCccccCCC
Q 001171 944 SLGLARGLSFLHSLDMVHGDIKPQNVLF--DADF--EAHLSEFGLDRLAIATP---AEASSSTTPIGSLGYVSPEAASTG 1016 (1133)
Q Consensus 944 ~~~ia~~L~~LH~~~ivH~Dlkp~NIll--~~~~--~~kl~Dfg~a~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~ 1016 (1133)
..|+++|+.|||++||.|||+|++|||+ |+|+ ...|+|||++-...... .........-|.-.-||||+....
T Consensus 347 laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 8899999999999999999999999999 3333 45899999874221110 011112233467788999998543
Q ss_pred C------CCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhh
Q 001171 1017 Q------PTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVG 1090 (1133)
Q Consensus 1017 ~------~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 1090 (1133)
. ...|+|.|+.|.+.||+++..-||.......+... ..++.+++.+.+..-. . .-+++
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r---~Yqe~qLPalp~~vpp-----------~--~rqlV 490 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR---TYQESQLPALPSRVPP-----------V--ARQLV 490 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh---hhhhhhCCCCcccCCh-----------H--HHHHH
Confidence 2 25789999999999999999999976433222111 1333333333221110 0 11677
Q ss_pred hccCCCCCCCCCCHHHHHHHH
Q 001171 1091 LLCTAPDPLDRPSMADIVFML 1111 (1133)
Q Consensus 1091 ~~Cl~~dP~~RPs~~evl~~L 1111 (1133)
...++.||.+|++..-....|
T Consensus 491 ~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 491 FDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHhcCCccccCCccHHHhHH
Confidence 788999999998866444433
No 435
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=1.8e-18 Score=175.17 Aligned_cols=185 Identities=17% Similarity=0.099 Sum_probs=135.8
Q ss_pred CcccccccccceeEEEEEECCceEEEEEEcccCCcCH-----HHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEEEe
Q 001171 840 DEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDE-----NTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 840 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-----~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
.+..+|++|+||+||.+.. .+..++.+.+.....-. ..+.+|+++|+++. |+++.+++++ ...+++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~-----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW-----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE-----cCEEEEEe
Confidence 3567899999999998765 57778877776544322 25789999999995 5788888886 22489999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceeccc-CccceeeCCCCceEEeccCcccccccCC
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI-KPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dl-kp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
|++|.+|.+.... . ...++.+++++++++|+.||+|||| ||+||+++.++.++|+|||+|.......
T Consensus 79 yI~G~~L~~~~~~-----------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 79 YLAGAAMYQRPPR-----------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred eecCccHHhhhhh-----------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 9999998754321 0 1246778999999999999999999 7999999999999999999997443221
Q ss_pred CC----C-CC-----CCCCCCCCCccCccccCC--CCCCCCCchhHHHHHHHHHHhCCCCCc
Q 001171 993 AE----A-SS-----STTPIGSLGYVSPEAAST--GQPTKEADVYSFGIVLLEILTGRKPVM 1042 (1133)
Q Consensus 993 ~~----~-~~-----~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~tg~~Pf~ 1042 (1133)
.. . .. ......++.|++|+...- ..--.+.+.++-|+-+|.++|++.|+.
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 10 0 00 011235677888875422 122245688899999999999998864
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=5e-20 Score=172.47 Aligned_cols=181 Identities=28% Similarity=0.540 Sum_probs=150.8
Q ss_pred ccCCCCCcEeeccCCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccccceeecccCccCCCCCccccCCCCcc
Q 001171 527 LFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALE 606 (1133)
Q Consensus 527 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 606 (1133)
++++..++.|.|++|+++ ..|..+..+.+|+.|++++|+|+ ..|..+..+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445556666777777776 45556777888888888888887 67888888899999999999988 8899999999999
Q ss_pred EEEecCCccc-CCCccccccccccCeeecCCCcccCcCchhhhccCCCcEEEeecCCCCccCCccccCcccccccccccc
Q 001171 607 VLELRSNHFT-GNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTN 685 (1133)
Q Consensus 607 ~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 685 (1133)
+|||.+|++. ..+|..|..+..|+.|+|+.|.+. .+|..++++++|+.|.+..|.+. ..|..++.+++|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 9999999987 358889999999999999999998 89999999999999999999998 78999999999999999999
Q ss_pred cccccCCccccccccC---cccccccccccc
Q 001171 686 RLSGAIPADLALISSL---RYLNLSRNNLEG 713 (1133)
Q Consensus 686 ~l~~~~p~~l~~l~~L---~~L~ls~N~l~~ 713 (1133)
+++ .+|++++++.-+ +.+.+.+|+|-.
T Consensus 184 rl~-vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 184 RLT-VLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred eee-ecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 998 788888876322 344555555543
No 437
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=3.3e-20 Score=211.06 Aligned_cols=279 Identities=24% Similarity=0.332 Sum_probs=157.4
Q ss_pred EEEccCCcCc-cccCccccCccccceeeccccccccc----CChhhcCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEE
Q 001171 415 IVSLGRNMFS-GLIPLSFGNLSQLETLNLSENDIRGN----IPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLN 489 (1133)
Q Consensus 415 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~i~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 489 (1133)
.|+|..+.++ ......|..+.+|+.|+++++.++.. ++..+...++|++|+++++.+.+ .+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~---------- 70 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGL---------- 70 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHH----------
Confidence 4667777776 33444556666777777777777432 34445556667777777766542 01000
Q ss_pred cccCCCccccCCCcCCcccccEEeccccCCCCCCChhccCCCC---CcEeeccCCcccc----cCCCCCCCC-ccCcEEE
Q 001171 490 LSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPS---LQVVSLEENNLSG----DVPEGFSSL-VGLQYLN 561 (1133)
Q Consensus 490 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~---L~~L~L~~N~l~~----~~~~~~~~l-~~L~~L~ 561 (1133)
..++..+..+++|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+
T Consensus 71 -------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~ 143 (319)
T cd00116 71 -------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLV 143 (319)
T ss_pred -------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEE
Confidence 112223334445555555555554333333333333 5555555555542 111223334 5566666
Q ss_pred cccccccCC----CCcccccccccceeecccCccCCC----CCccccCCCCccEEEecCCcccCC----Ccccccccccc
Q 001171 562 LSDNAFTGD----IPATYGFLRSLVFLSLSHNQISGM----IPAELGACSALEVLELRSNHFTGN----IPVDISHLSRI 629 (1133)
Q Consensus 562 Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L 629 (1133)
+++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|
T Consensus 144 L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L 223 (319)
T cd00116 144 LGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSL 223 (319)
T ss_pred cCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCC
Confidence 666666532 223344455677777777766632 222334455777777777776532 22334556778
Q ss_pred CeeecCCCcccCcCchhhhc-----cCCCcEEEeecCCCCc----cCCccccCccccccccccccccccc----CCcccc
Q 001171 630 KKLDLGQNKLSGEIPKEISK-----CSSLVSLTLDMNSLSG----RIPESFSKLSNLTTLNLSTNRLSGA----IPADLA 696 (1133)
Q Consensus 630 ~~L~Ls~N~l~~~~p~~l~~-----l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~ 696 (1133)
+.|++++|.+++.....+.. .+.|++|++++|.++. .+...+..+++|+.+++++|+++.. ....+.
T Consensus 224 ~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~ 303 (319)
T cd00116 224 EVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLL 303 (319)
T ss_pred CEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHh
Confidence 88888888777544444332 2678888888888762 2334455667788888888888754 333444
Q ss_pred cc-ccCcccccccccc
Q 001171 697 LI-SSLRYLNLSRNNL 711 (1133)
Q Consensus 697 ~l-~~L~~L~ls~N~l 711 (1133)
.. +.|+.+|+.+|++
T Consensus 304 ~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 304 EPGNELESLWVKDDSF 319 (319)
T ss_pred hcCCchhhcccCCCCC
Confidence 44 6788888888764
No 438
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.75 E-value=3.1e-19 Score=201.53 Aligned_cols=185 Identities=27% Similarity=0.393 Sum_probs=152.4
Q ss_pred ccccccceeEEEEEE----CCceEEEEEEcccCCcC---HHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEEEecc
Q 001171 844 VLSRGRYGLIFKASY----QDGMVLSIRRLRDGTID---ENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLVYDYM 915 (1133)
Q Consensus 844 ~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV~e~~ 915 (1133)
++|+|.||.|+.++. ..|..+|+|..++.... ......|..++...+ ||.+|+++..+..+. ..+++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~-kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG-KLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc-chhHhhhhc
Confidence 479999999988732 34788999988654332 124556888899997 999999987777654 448999999
Q ss_pred CCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCCC
Q 001171 916 PNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEA 995 (1133)
Q Consensus 916 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 995 (1133)
.+|.+...+.... .+.+.....+...+|-+++++|+.+|+|||+|++||+++.+|++++.|||+++.......
T Consensus 80 rgg~lft~l~~~~-----~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-- 152 (612)
T KOG0603|consen 80 RGGDLFTRLSKEV-----MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-- 152 (612)
T ss_pred ccchhhhccccCC-----chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh--
Confidence 9999998887643 366677777888899999999999999999999999999999999999999976543221
Q ss_pred CCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCcc
Q 001171 996 SSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMF 1043 (1133)
Q Consensus 996 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~ 1043 (1133)
.+||..|||||++. ....++|.||||++++||+||..||..
T Consensus 153 -----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 153 -----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred -----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 28999999999997 567889999999999999999999965
No 439
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=1e-19 Score=206.91 Aligned_cols=262 Identities=25% Similarity=0.313 Sum_probs=130.5
Q ss_pred chhhcccccceeeccCceeec----ccCcccCCCCCCcEEEccCCcccc------cCchhhccCCCccEEEccCCccccc
Q 001171 333 SWLTNVTSLRVMDLSGNFFSG----NLPAAVGSLDKLEVLRVANNSLSG------LVPDEIAKCSLLQMFDLEGNRFSGQ 402 (1133)
Q Consensus 333 ~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~L~~L~Ls~N~l~~~ 402 (1133)
..|..+.+|++|+++++.++. .++..+...+.|++|+++++.+.+ .++..+..+++|+.|++++|.+.+.
T Consensus 17 ~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~ 96 (319)
T cd00116 17 ELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPD 96 (319)
T ss_pred HHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChh
Confidence 445556667777777776642 234445556667777777666652 2234555666777777777766654
Q ss_pred CCCccCCCCC---CcEEEccCCcCcc----ccCccccCc-cccceeeccccccccc----CChhhcCCCCCcEEecccCc
Q 001171 403 VPAFLGGIRG---LKIVSLGRNMFSG----LIPLSFGNL-SQLETLNLSENDIRGN----IPEEITRLSNLTTLNLSYNK 470 (1133)
Q Consensus 403 ~p~~l~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~i~~~----~~~~l~~l~~L~~L~Ls~N~ 470 (1133)
.+..+..+.. |+.|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+..+.+|++|++++|.
T Consensus 97 ~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~ 176 (319)
T cd00116 97 GCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNG 176 (319)
T ss_pred HHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCC
Confidence 4444443333 6666666666552 122233344 5566666666665532 22234445556666666665
Q ss_pred CCCCC----CCCCCCCCCCcEEEcccCCCccccCCCcCCcccccEEeccccCCCCCCChhccCCCCCcEeeccCCccccc
Q 001171 471 FGGKV----PYDVGNLKGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGD 546 (1133)
Q Consensus 471 l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 546 (1133)
+++.. +..+..+++|++|++++|.+++.... .++..+..+++|++|++++|.+++.
T Consensus 177 l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~--------------------~l~~~~~~~~~L~~L~ls~n~l~~~ 236 (319)
T cd00116 177 IGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS--------------------ALAETLASLKSLEVLNLGDNNLTDA 236 (319)
T ss_pred CchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH--------------------HHHHHhcccCCCCEEecCCCcCchH
Confidence 55311 11122233444444444444322110 1112233344455555555544431
Q ss_pred CCCCCC-----CCccCcEEEcccccccC----CCCcccccccccceeecccCccCCC----CCccccCC-CCccEEEecC
Q 001171 547 VPEGFS-----SLVGLQYLNLSDNAFTG----DIPATYGFLRSLVFLSLSHNQISGM----IPAELGAC-SALEVLELRS 612 (1133)
Q Consensus 547 ~~~~~~-----~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l-~~L~~L~L~~ 612 (1133)
....+. ..+.|++|++++|.+++ .+...+..+++|+++++++|.++.. ....+... +.|++|++.+
T Consensus 237 ~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (319)
T cd00116 237 GAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKD 316 (319)
T ss_pred HHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCC
Confidence 111111 13456666666666542 1223344446666677777766644 22233333 5667777666
Q ss_pred Cc
Q 001171 613 NH 614 (1133)
Q Consensus 613 N~ 614 (1133)
|.
T Consensus 317 ~~ 318 (319)
T cd00116 317 DS 318 (319)
T ss_pred CC
Confidence 64
No 440
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.73 E-value=5e-18 Score=181.62 Aligned_cols=235 Identities=21% Similarity=0.302 Sum_probs=143.9
Q ss_pred CCCcccccccccceeEEEEEEC-CceEEEEEEcccCCc----CHHHHHHHHHHHhhccC----------CCeeeEEEEEe
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDGTI----DENTFRKEAEALGKVKH----------RNLTVLRGYYA 902 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h----------pniv~l~~~~~ 902 (1133)
.+...+.||.|+++.||.+.+. +|+.+|+|++..... +.+++++|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4566789999999999999886 589999999854332 13556666655544322 12222222221
Q ss_pred ---------CCC--C-----cEEEEEeccCCCCHHHHHHhhccCC--CCCCChHHHHHHHHHHHHHHHHHhcCCceeccc
Q 001171 903 ---------GPP--D-----VRLLVYDYMPNGNLATLLQEASHQD--GHVLNWPMRHLISLGLARGLSFLHSLDMVHGDI 964 (1133)
Q Consensus 903 ---------~~~--~-----~~~lV~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dl 964 (1133)
... . ..+++|+-+ .++|.+++..-.... ........+..+..|+++.+++||+.|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 110 1 125677777 678888765422111 122445566777799999999999999999999
Q ss_pred CccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCC--------CCCCCCchhHHHHHHHHHHh
Q 001171 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTG--------QPTKEADVYSFGIVLLEILT 1036 (1133)
Q Consensus 965 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~DvwSlG~il~el~t 1036 (1133)
||+|++++++|.++++||+....... .. .....+..|.+||..... .++.+.|.|++|+++|.|++
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~---~~---~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGT---RY---RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTE---EE---EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCc---ee---eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999987643321 11 112345789999986432 46888999999999999999
Q ss_pred CCCCCccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCC
Q 001171 1037 GRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDR 1101 (1133)
Q Consensus 1037 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~R 1101 (1133)
|..||..........+ .+.... +..+... .+|..+++.+|++|
T Consensus 246 ~~lPf~~~~~~~~~~~-------------------~f~~C~-~~Pe~v~--~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW-------------------DFSRCR-DMPEPVQ--FLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG-------------------GGTTSS----HHHH--HHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc-------------------cchhcC-CcCHHHH--HHHHHHccCCcccC
Confidence 9999975433221111 011111 2222222 68899999999988
No 441
>PRK10345 hypothetical protein; Provisional
Probab=99.71 E-value=6e-17 Score=168.39 Aligned_cols=135 Identities=15% Similarity=0.181 Sum_probs=103.2
Q ss_pred CCcccccccccceeEEEEEECCceEEEEEEcccC-CcCHHHHHHHHHHHhhc-----cCCCeeeEEEEEeCCCC--c-EE
Q 001171 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDG-TIDENTFRKEAEALGKV-----KHRNLTVLRGYYAGPPD--V-RL 909 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~-~~~~~~~~~E~~~l~~l-----~hpniv~l~~~~~~~~~--~-~~ 909 (1133)
+.-.+.||+|+||.||. +......+||++... ....+.+.+|+++++.+ .||||++++|++.++.+ . ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34457899999999996 443333368887643 22356799999999999 57999999999987642 2 23
Q ss_pred EEEec--cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHH-HHHhcCCceecccCccceeeCC----CCceEEecc
Q 001171 910 LVYDY--MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGL-SFLHSLDMVHGDIKPQNVLFDA----DFEAHLSEF 982 (1133)
Q Consensus 910 lV~e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L-~~LH~~~ivH~Dlkp~NIll~~----~~~~kl~Df 982 (1133)
+|+|| +.+|+|.+++.+.. +++. ..++.+++.++ +|||+++|+||||||+||+++. ++.++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~------~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR------YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHccc------ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 55799999997521 3443 34567777777 9999999999999999999974 347999995
Q ss_pred C
Q 001171 983 G 983 (1133)
Q Consensus 983 g 983 (1133)
+
T Consensus 154 ~ 154 (210)
T PRK10345 154 I 154 (210)
T ss_pred C
Confidence 4
No 442
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=2.9e-17 Score=199.21 Aligned_cols=196 Identities=19% Similarity=0.277 Sum_probs=152.3
Q ss_pred HhcCCCcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhcc---CCCeeeEEEEEeCCCCcEEEE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVK---HRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~~lV 911 (1133)
-.++|.+.+.||+|+||.||+|...+|+.||+|+-+.... -+|.--.+++.||+ -+.|+.+...+...+. .++|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~--WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~-S~lv 772 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP--WEFYICLQVMERLKPQMLPSIMHISSAHVFQNA-SVLV 772 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc--eeeeehHHHHHhhchhhhcchHHHHHHHccCCc-ceee
Confidence 3457889999999999999999888899999999764432 22333344555555 2233444433333333 3899
Q ss_pred EeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeC-------CCCceEEeccCc
Q 001171 912 YDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFD-------ADFEAHLSEFGL 984 (1133)
Q Consensus 912 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~-------~~~~~kl~Dfg~ 984 (1133)
+||.+.|+|.++++. .+..+|...+.++.|+++.+++||..+||||||||+|.++. ....++|+|||.
T Consensus 773 ~ey~~~Gtlld~~N~-----~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINT-----NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred eeccccccHHHhhcc-----CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 999999999999984 34589999999999999999999999999999999999993 234579999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCC
Q 001171 985 DRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRK 1039 (1133)
Q Consensus 985 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~ 1039 (1133)
+-...--. ........++|-.+-.+|+..++.++.++|.|.++-+++.|+.|++
T Consensus 848 siDm~lfp-~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 848 SIDMKLFP-DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ceeeeEcC-CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 84322111 1234456678888999999999999999999999999999999975
No 443
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.69 E-value=1.2e-18 Score=163.20 Aligned_cols=165 Identities=33% Similarity=0.607 Sum_probs=103.9
Q ss_pred cCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEEcccCCCccccCCCcCCcccccEEeccccCCCCCCChhccCCCCCcE
Q 001171 456 TRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQV 535 (1133)
Q Consensus 456 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 535 (1133)
..+++.+.|.||+|+++ .+|..++++.+|+.|++++|+++ .+|.+++++++|+.|+++-|++.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~--------------- 92 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN--------------- 92 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh---------------
Confidence 34555666666666665 44445555555555555555554 34444444444444444444443
Q ss_pred eeccCCcccccCCCCCCCCccCcEEEccccccc-CCCCcccccccccceeecccCccCCCCCccccCCCCccEEEecCCc
Q 001171 536 VSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFT-GDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNH 614 (1133)
Q Consensus 536 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 614 (1133)
..|..|+.++.|+.|||.+|++. ...|..|..+..|+.|+|+.|.+. .+|..++++++|+.|.++.|.
T Consensus 93 ----------~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 93 ----------ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred ----------cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCc
Confidence 44455555555555555555543 245666666777777777777776 677778888888888888888
Q ss_pred ccCCCccccccccccCeeecCCCcccCcCchhhhcc
Q 001171 615 FTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKC 650 (1133)
Q Consensus 615 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 650 (1133)
+- .+|.+++.+.+|++|.+.+|+++ .+|.+++++
T Consensus 162 ll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 162 LL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred hh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 77 47888888888888888888887 677776654
No 444
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.69 E-value=8e-17 Score=183.12 Aligned_cols=216 Identities=26% Similarity=0.387 Sum_probs=158.6
Q ss_pred HhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCc-eeccc
Q 001171 886 LGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDM-VHGDI 964 (1133)
Q Consensus 886 l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~i-vH~Dl 964 (1133)
|+.+.|.|+.+++|.+..+ ...+.|.+||..|+|.+.+... ...++|.....+.++|+.||+|+|...| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~-~~~~~i~~~c~rGsl~D~i~~~----~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-PEMIVIWEYCSRGSLLDILSNE----DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecC-CceEEEEeeecCccHHhHHhcc----ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeee
Confidence 4678999999999999887 4448999999999999999863 2448999999999999999999998876 99999
Q ss_pred CccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccCCCC-------CCCCCchhHHHHHHHHHHhC
Q 001171 965 KPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQ-------PTKEADVYSFGIVLLEILTG 1037 (1133)
Q Consensus 965 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwSlG~il~el~tg 1037 (1133)
++.|.++|....+|++|||+.......... .......-..-|.|||.+.... .+.+.||||||++++|+++.
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~-~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEP-EAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccc-cccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 999999999999999999998654321110 1111112334689999986531 46779999999999999999
Q ss_pred CCCCccC----ChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1038 RKPVMFT----QDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1038 ~~Pf~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
+.||... +++++..++++. -...+.|...... +.....+.++..||..+|++||++++|-..++.
T Consensus 155 ~~~~~~~~~~~~~~eii~~~~~~-----~~~~~rP~i~~~~------e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~ 223 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRVKKG-----GSNPFRPSIELLN------ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT 223 (484)
T ss_pred cCccccccccCChHHHHHHHHhc-----CCCCcCcchhhhh------hcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence 9999642 223344443331 1111112111100 111134478999999999999999999999888
Q ss_pred CcCCC
Q 001171 1114 CRVGP 1118 (1133)
Q Consensus 1114 ~~~~~ 1118 (1133)
.....
T Consensus 224 ~~~~~ 228 (484)
T KOG1023|consen 224 INKGG 228 (484)
T ss_pred hcccc
Confidence 66543
No 445
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=1.8e-16 Score=168.42 Aligned_cols=133 Identities=21% Similarity=0.394 Sum_probs=109.4
Q ss_pred cccccccceeEEEEEECCceEEEEEEcccCCcC---------HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID---------ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
+.||+|++|.||+|.+ .|..|++|+....... ...+.+|++++..++|+++.....++..... .++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~-~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPEN-FIIVME 79 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCC-CEEEEE
Confidence 5799999999999987 5777888876532211 2357789999999999998776666654433 489999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
|++|++|.+++... .. .+..++.+++.++.++|+.+++|||++|.||+++ ++.++++|||.++.
T Consensus 80 ~~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999998642 12 7788999999999999999999999999999999 78899999998754
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.65 E-value=3.9e-16 Score=166.77 Aligned_cols=139 Identities=15% Similarity=0.161 Sum_probs=107.8
Q ss_pred CCCcccccccccceeEEEEE--ECCceEEEEEEcccCCcC-------------------------HHHHHHHHHHHhhcc
Q 001171 838 QFDEENVLSRGRYGLIFKAS--YQDGMVLSIRRLRDGTID-------------------------ENTFRKEAEALGKVK 890 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~-------------------------~~~~~~E~~~l~~l~ 890 (1133)
-|.+.+.||+|+||.||+|. ..+|+.||+|++...... ...+.+|+++++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999998 467999999998643210 123568999999997
Q ss_pred CCC--eeeEEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCC-ceecccCcc
Q 001171 891 HRN--LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLD-MVHGDIKPQ 967 (1133)
Q Consensus 891 hpn--iv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-ivH~Dlkp~ 967 (1133)
+.. +...+++ . . .++||||++++++....... ..........++.||+.+++|+|+.| |+|||+||+
T Consensus 109 ~~~i~~p~~~~~---~-~-~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~ 178 (237)
T smart00090 109 EAGVPVPKPIAW---R-R-NVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEY 178 (237)
T ss_pred hcCCCCCeeeEe---c-C-ceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChh
Confidence 633 3333332 2 2 38999999998877654221 12445556789999999999999999 999999999
Q ss_pred ceeeCCCCceEEeccCcccc
Q 001171 968 NVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 968 NIll~~~~~~kl~Dfg~a~~ 987 (1133)
||+++ ++.++++|||.+..
T Consensus 179 NIli~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred hEEEE-CCCEEEEEChhhhc
Confidence 99999 88999999998753
No 447
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=1.5e-16 Score=188.12 Aligned_cols=210 Identities=23% Similarity=0.368 Sum_probs=146.2
Q ss_pred hcCCCcccccccccceeEEEEEECC-ceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
..+|+.++.|..|+||.||.++++. .+.+|+ ++.+... +.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l----ilRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL----ILRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhh-cccccch----hhhc--cccccCCccee-------------------
Confidence 4578899999999999999998874 677888 4433221 1110 22222333322
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCCCC
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAE 994 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 994 (1133)
|+-.+.++..+. ++. +++.+++|+|+.||+|||+||+|.+|+.-|++|++|||+++........
T Consensus 136 ---gDc~tllk~~g~-----lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP-----LPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccCCC-----Ccc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 444445544332 222 2367999999999999999999999999999999999998654322111
Q ss_pred ------------CCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccc
Q 001171 995 ------------ASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQI 1062 (1133)
Q Consensus 995 ------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 1062 (1133)
.-.....+||+.|+|||++....|++.+|.|++|+|+||.+.|+.||.+...+++...+...... +
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~--w 277 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE--W 277 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc--c
Confidence 11123458999999999999999999999999999999999999999988888877776653211 1
Q ss_pred cccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCC
Q 001171 1063 SELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRP 1102 (1133)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RP 1102 (1133)
++- |.. .++ .+.+++.+.++.+|..|-
T Consensus 278 pE~-dea---~p~---------Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 278 PEE-DEA---LPP---------EAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ccc-CcC---CCH---------HHHHHHHHHHHhChHhhc
Confidence 111 111 111 122677778888998884
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.63 E-value=1.7e-15 Score=158.83 Aligned_cols=134 Identities=16% Similarity=0.142 Sum_probs=106.7
Q ss_pred CCCcccccccccceeEEEEEECCceEEEEEEcccCCcC-----------------------HHHHHHHHHHHhhccCCC-
Q 001171 838 QFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID-----------------------ENTFRKEAEALGKVKHRN- 893 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----------------------~~~~~~E~~~l~~l~hpn- 893 (1133)
.|.+.+.||+|+||.||+|..++|+.||||++..+... ...+.+|..++.++.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 48888999999999999998888999999987543210 123677899999998874
Q ss_pred -eeeEEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeC
Q 001171 894 -LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFD 972 (1133)
Q Consensus 894 -iv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~ 972 (1133)
+...++. ...++||||+++++|...... .....++.+++.++.++|+.||+||||||+||+++
T Consensus 96 ~v~~~~~~-----~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~ 159 (198)
T cd05144 96 PVPKPIDW-----NRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD 159 (198)
T ss_pred CCCceeec-----CCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc
Confidence 3333332 234899999999988765321 23456888999999999999999999999999999
Q ss_pred CCCceEEeccCcccc
Q 001171 973 ADFEAHLSEFGLDRL 987 (1133)
Q Consensus 973 ~~~~~kl~Dfg~a~~ 987 (1133)
+++.++++|||++..
T Consensus 160 ~~~~~~liDfg~~~~ 174 (198)
T cd05144 160 DDEKIYIIDWPQMVS 174 (198)
T ss_pred CCCcEEEEECCcccc
Confidence 999999999999853
No 449
>PLN03150 hypothetical protein; Provisional
Probab=99.63 E-value=6.5e-16 Score=188.31 Aligned_cols=135 Identities=35% Similarity=0.595 Sum_probs=109.6
Q ss_pred ccCchhHHHHHHHHHHhCCCCCCCccCCCCCCCCCC--CccceeeeCC------CceEEEeeCCcccCcccchhhccccc
Q 001171 25 NAVVLSEIQALTSFKLHLKDPLGALDGWDSSTPSAP--CDWRGIVCYN------NRVRELRLPRLQLAGRLTDQLADLHE 96 (1133)
Q Consensus 25 ~~~~~~~~~~l~~~k~~~~~~~~~l~~w~~~~~~~~--c~w~gv~c~~------~~v~~l~l~~~~l~g~~~~~l~~l~~ 96 (1133)
.++...|++||++||+++.+|.. .+|+. ++..| |.|.||+|+. .+|+.|+|.++++.|.+|+.++.+++
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~--~~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~ 443 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR--FGWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRH 443 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc--CCCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCC
Confidence 35667899999999999977643 58964 22111 2799999952 25899999999999999999999999
Q ss_pred CcEEEcccCcccCCCCccccCCCCcceEeccCCcccCcCCCccccccchhhhhhcccccCCCccCc
Q 001171 97 LRKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISAD 162 (1133)
Q Consensus 97 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~l~~N~l~~~~~~~ 162 (1133)
|+.|+|++|++.|.+|..++.+++|+.|+|++|+++|.+|..++++++|++|+|++|.++|.+|..
T Consensus 444 L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~ 509 (623)
T PLN03150 444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAA 509 (623)
T ss_pred CCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChH
Confidence 999999999999999999999999999999999999999999998887766665555555544443
No 450
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.62 E-value=4.8e-16 Score=172.61 Aligned_cols=176 Identities=22% Similarity=0.346 Sum_probs=128.9
Q ss_pred cEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccc
Q 001171 907 VRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 907 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
+.|+.|++|...+|.+|+.+.+. ....++.....++.|++.|++| ++.+|||+||.||++..+..+||+|||+..
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhhee
Confidence 45899999999999999986443 3456788888999999999999 999999999999999999999999999975
Q ss_pred ccccCC---CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHh-CCCCCccCChhhHHHHHHHHhhhccc
Q 001171 987 LAIATP---AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILT-GRKPVMFTQDEDIVKWVKKQLQRGQI 1062 (1133)
Q Consensus 987 ~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 1062 (1133)
...... ......+...||..||+||.+.+..|+.++||||+|++++|++. =..+|. .......++.+.+
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-------r~~t~~d~r~g~i 477 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-------RIATLTDIRDGII 477 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-------HHHhhhhhhcCCC
Confidence 443222 01223456689999999999999999999999999999999986 122221 1111122233333
Q ss_pred cccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHH
Q 001171 1063 SELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADI 1107 (1133)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~ev 1107 (1133)
++.+- .++.....+..+++.+.|.+||++.++
T Consensus 478 p~~~~-------------~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 478 PPEFL-------------QDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ChHHh-------------hcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 31111 111122356778999999999955443
No 451
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.62 E-value=1.2e-15 Score=160.35 Aligned_cols=129 Identities=21% Similarity=0.405 Sum_probs=102.4
Q ss_pred ccccccceeEEEEEECCceEEEEEEcccCCc---------CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEec
Q 001171 844 VLSRGRYGLIFKASYQDGMVLSIRRLRDGTI---------DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDY 914 (1133)
Q Consensus 844 ~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~ 914 (1133)
.||+|+||.||+|.+. |..|++|+...... ....+.+|+++++.++|+++.....++..... .++||||
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~-~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDN-KTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC-CEEEEEE
Confidence 4899999999999864 67888888643211 12456789999999998876544444443333 4899999
Q ss_pred cCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 915 MPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 915 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
++|++|.+++.... . .++.+++.++.++|+.|++|||++|.||+++ ++.+++.|||.++.
T Consensus 79 ~~g~~l~~~~~~~~--------~----~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN--------D----ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH--------H----HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998876421 0 6889999999999999999999999999999 88999999998754
No 452
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.61 E-value=2.6e-15 Score=181.53 Aligned_cols=137 Identities=21% Similarity=0.325 Sum_probs=108.1
Q ss_pred hcCCCcccccccccceeEEEEEECCceEEEEEEcccCCc--------CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCc
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTI--------DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 907 (1133)
...|...+.||+|+||+||+|.+.....++.+++.+... ..+.+.+|++++++++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~- 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE- 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC-
Confidence 345567889999999999999876544333222222111 12467899999999999999887776665433
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
.++||||+++++|.+++. .+..++.++++++.|||+.+|+|||+||+||++ .++.++++|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 489999999999998875 235688999999999999999999999999999 678999999999854
No 453
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=1.1e-13 Score=148.25 Aligned_cols=135 Identities=19% Similarity=0.240 Sum_probs=103.0
Q ss_pred ccccc-cccceeEEEEEECCceEEEEEEcccCC--------------cCHHHHHHHHHHHhhccCCCe--eeEEEEEeCC
Q 001171 842 ENVLS-RGRYGLIFKASYQDGMVLSIRRLRDGT--------------IDENTFRKEAEALGKVKHRNL--TVLRGYYAGP 904 (1133)
Q Consensus 842 ~~~lg-~G~~g~Vy~~~~~~g~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~hpni--v~l~~~~~~~ 904 (1133)
..+|| .|+.|+||.+... +..+++|++..+. .....+.+|++++.+++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35687 8889999999775 6778888774321 123567889999999998875 5666664433
Q ss_pred CCc---EEEEEeccCC-CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEe
Q 001171 905 PDV---RLLVYDYMPN-GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLS 980 (1133)
Q Consensus 905 ~~~---~~lV~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~ 980 (1133)
... .++||||+++ .+|.+++... .++.. .+.+|+.++.+||+.||+||||||+|||++.++.++++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEE
Confidence 222 2499999997 6899887642 13332 35789999999999999999999999999999999999
Q ss_pred ccCcccc
Q 001171 981 EFGLDRL 987 (1133)
Q Consensus 981 Dfg~a~~ 987 (1133)
|||.++.
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998753
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.50 E-value=3.5e-14 Score=147.60 Aligned_cols=133 Identities=17% Similarity=0.199 Sum_probs=96.2
Q ss_pred ccccccccceeEEEEEECCceEEEEEEcccCCcCH---HH----------------------HHHHHHHHhhccCCC--e
Q 001171 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDE---NT----------------------FRKEAEALGKVKHRN--L 894 (1133)
Q Consensus 842 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---~~----------------------~~~E~~~l~~l~hpn--i 894 (1133)
.+.||+|+||.||+|...+|+.||||++....... .. ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999988889999999986532211 11 135666666665443 3
Q ss_pred eeEEEEEeCCCCcEEEEEeccCCCCHHH-HHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceecccCccceeeC
Q 001171 895 TVLRGYYAGPPDVRLLVYDYMPNGNLAT-LLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS-LDMVHGDIKPQNVLFD 972 (1133)
Q Consensus 895 v~l~~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~ivH~Dlkp~NIll~ 972 (1133)
.+.+++. ..++||||++++.+.. .+.... .. .....++.+++.++.++|+ .+|+|||+||+||+++
T Consensus 82 ~~~~~~~-----~~~lv~e~~~g~~~~~~~l~~~~------~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDLN-----RHVLVMEFIGGDGIPAPRLKDVR------LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD 149 (187)
T ss_pred CceEecC-----CCEEEEEEeCCCCccChhhhhhh------hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence 3333321 2389999999854321 111110 11 4567789999999999999 9999999999999999
Q ss_pred CCCceEEeccCcccc
Q 001171 973 ADFEAHLSEFGLDRL 987 (1133)
Q Consensus 973 ~~~~~kl~Dfg~a~~ 987 (1133)
++.++++|||.+..
T Consensus 150 -~~~~~liDfg~a~~ 163 (187)
T cd05119 150 -DGKVYIIDVPQAVE 163 (187)
T ss_pred -CCcEEEEECccccc
Confidence 89999999998853
No 455
>PLN03150 hypothetical protein; Provisional
Probab=99.46 E-value=6.2e-14 Score=171.07 Aligned_cols=118 Identities=41% Similarity=0.636 Sum_probs=81.0
Q ss_pred ccCeeecCCCcccCcCchhhhccCCCcEEEeecCCCCccCCccccCcccccccccccccccccCCccccccccCcccccc
Q 001171 628 RIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLS 707 (1133)
Q Consensus 628 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls 707 (1133)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 35666777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cccccccCCccccCCCCC--CcccCcCccccCCCCCCCCc
Q 001171 708 RNNLEGEIPKMLSSRFND--PSIFAMNRELCGKPLDRECA 745 (1133)
Q Consensus 708 ~N~l~~~~p~~~~~~~~~--~~~~~~n~~lcg~~~~~~c~ 745 (1133)
+|+++|.+|..+...+.. .-.+.+|..+||.|....|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 777777777655432211 11277888899887666775
No 456
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.46 E-value=3.8e-13 Score=134.49 Aligned_cols=131 Identities=16% Similarity=0.178 Sum_probs=108.5
Q ss_pred cccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccC--CCeeeEEEEEeCCCCcEEEEEeccCCC
Q 001171 841 EENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKH--RNLTVLRGYYAGPPDVRLLVYDYMPNG 918 (1133)
Q Consensus 841 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~~lV~e~~~~g 918 (1133)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+++++.++| ..+.+++++.... +..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESD-GWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-CccEEEEEecCCe
Confidence 35679999999999998864 7889999865443 5678999999999977 4888888877655 4559999999887
Q ss_pred CHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC---CceecccCccceeeCCCCceEEeccCccc
Q 001171 919 NLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL---DMVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 919 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
.+..+ +......++.+++++++++|.. +++|+|++|+||++++.+.+++.|||.++
T Consensus 79 ~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~ 137 (155)
T cd05120 79 TLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG 137 (155)
T ss_pred ecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence 66533 3455667889999999999985 69999999999999998999999999875
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=9.6e-15 Score=175.10 Aligned_cols=250 Identities=23% Similarity=0.317 Sum_probs=182.6
Q ss_pred CCCcccccccccceeEEEEEEC--CceEEEEEEcccCCcC---HHHHHHHHHHHhhcc-CCCeeeEEEEEeCCCCcEEEE
Q 001171 838 QFDEENVLSRGRYGLIFKASYQ--DGMVLSIRRLRDGTID---ENTFRKEAEALGKVK-HRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 838 ~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~~lV 911 (1133)
.|.+.+.||+|+|+.|-..... ....+|+|.+.....+ ......|..+-+.+. |+|++..++.....+. .+++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~-~~~~ 99 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRS-YLLS 99 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcc-cccc
Confidence 5677788999999999888553 3456677776543322 234455888888886 9999999998877644 4899
Q ss_pred EeccCCCCHHHHH-HhhccCCCCCCChHHHHHHHHHHHHHHHHHh-cCCceecccCccceeeCCCC-ceEEeccCccccc
Q 001171 912 YDYMPNGNLATLL-QEASHQDGHVLNWPMRHLISLGLARGLSFLH-SLDMVHGDIKPQNVLFDADF-EAHLSEFGLDRLA 988 (1133)
Q Consensus 912 ~e~~~~gsL~~~l-~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~ 988 (1133)
.+|..++++.+-+ +... ...+......+..|+..++.|+| ..+++|||+||+|.+++..+ ..+++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~~~----~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDS----TGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccCCc----cCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999998877 3221 12555666778899999999999 99999999999999999999 9999999999766
Q ss_pred ccCCCCCCCCCCCCC-CCCccCccccCCC-CCCCCCchhHHHHHHHHHHhCCCCCccCChhh--HHHHHHHHhhhccccc
Q 001171 989 IATPAEASSSTTPIG-SLGYVSPEAASTG-QPTKEADVYSFGIVLLEILTGRKPVMFTQDED--IVKWVKKQLQRGQISE 1064 (1133)
Q Consensus 989 ~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~--~~~~~~~~~~~~~~~~ 1064 (1133)
.............+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+......+ ...|.... .....
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~ 252 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK---GRFTQ 252 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc---ccccc
Confidence 553344444556678 9999999999875 44788999999999999999999997554332 12221111 00000
Q ss_pred cccCCcCCCCCCChhHHHHHH-hHhhhhccCCCCCCCCCCHHHHH
Q 001171 1065 LLEPGLLELDPESSEWEEFLL-GVKVGLLCTAPDPLDRPSMADIV 1108 (1133)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~~~~~-~~~li~~Cl~~dP~~RPs~~evl 1108 (1133)
..|..... ..++..+++..+|..|.+.+++.
T Consensus 253 -------------~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 253 -------------LPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred -------------CccccCChhhhhcccccccCCchhcccccccc
Confidence 00111111 12567778889999999988875
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.43 E-value=5.3e-15 Score=163.75 Aligned_cols=182 Identities=30% Similarity=0.529 Sum_probs=124.1
Q ss_pred CcccccEEeccccCCCCCCChhccCCCCCcEeeccCCcccccCCCCCCCCccCcEEEcccccccCCCCccccccccccee
Q 001171 505 SLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFL 584 (1133)
Q Consensus 505 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 584 (1133)
.++.-...|++.|++. ++|..+..+..|+.+.|..|.+. .+|..+.++..|++|||+.|+++ ..|..++.++ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3444556777777776 67777777777777777777776 56667777777777777777776 5565665554 6677
Q ss_pred ecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCchhhhccCCCcEEEeecCCCC
Q 001171 585 SLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLS 664 (1133)
Q Consensus 585 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 664 (1133)
-+++|+++ .+|..++....|..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|.+++ .-.|..||+|+|+++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNkis 224 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNKIS 224 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCcee
Confidence 77777776 66666776677777777777776 46666777777777777777776 5666666 335667777777777
Q ss_pred ccCCccccCcccccccccccccccccCCcccc
Q 001171 665 GRIPESFSKLSNLTTLNLSTNRLSGAIPADLA 696 (1133)
Q Consensus 665 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 696 (1133)
.+|-.|.+|+.|++|-|.+|.|+ ..|..++
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCC-CChHHHH
Confidence 56777777777777777777776 3444443
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.38 E-value=1.8e-14 Score=159.58 Aligned_cols=193 Identities=29% Similarity=0.510 Sum_probs=121.8
Q ss_pred CCCcEEEcccCCCccccCCCcCCcccccEEeccccCCCCCCChhccCCCCCcEeeccCCcccccCCCCCCCCccCcEEEc
Q 001171 483 KGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNL 562 (1133)
Q Consensus 483 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 562 (1133)
..-...+|+.|++. .+|..++.+..|+.+.|+.|.+. .+|..++++..|++|+|+.|+++ ..|..+..++ |+.|-+
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~ 150 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIV 150 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEE
Confidence 33345666666666 56666666666677777776665 56666777777777777777766 4555555444 666777
Q ss_pred ccccccCCCCcccccccccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCc
Q 001171 563 SDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGE 642 (1133)
Q Consensus 563 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 642 (1133)
++|+++ .+|..++..+.|..||.+.|.|. .+|..++.+.+|+.|.++.|++. .+|.++..| .|..||+|.|+++ .
T Consensus 151 sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 151 SNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-Y 225 (722)
T ss_pred ecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-e
Confidence 777766 56666666666777777777766 56666666677777777777766 356566543 3666777777776 6
Q ss_pred CchhhhccCCCcEEEeecCCCCccCCcccc---Ccccccccccccc
Q 001171 643 IPKEISKCSSLVSLTLDMNSLSGRIPESFS---KLSNLTTLNLSTN 685 (1133)
Q Consensus 643 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~Ls~N 685 (1133)
+|-+|.+|..|+.|-|.+|.++ ..|..++ ...=-++|+..-+
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 6777777777777777777776 3444332 2223344555444
No 460
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.33 E-value=5.4e-12 Score=147.20 Aligned_cols=140 Identities=21% Similarity=0.260 Sum_probs=101.6
Q ss_pred ccccccccceeEEEEEECCceEEEEEEcccCCcC-----------------------------------------HHHHH
Q 001171 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTID-----------------------------------------ENTFR 880 (1133)
Q Consensus 842 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----------------------------------------~~~~~ 880 (1133)
.+.||+|++|.||+|+.++|+.||||+.+.+... +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 3679999999999999999999999998643210 01245
Q ss_pred HHHHHHhhcc----CCCeeeEEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHH-HHHHHh
Q 001171 881 KEAEALGKVK----HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR-GLSFLH 955 (1133)
Q Consensus 881 ~E~~~l~~l~----hpniv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-~L~~LH 955 (1133)
+|++.+.+++ |.+-+.+-.++.+.....++||||++|+++.++...... .. .+..++..++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~----~~---~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA----GL---DRKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc----CC---CHHHHHHHHHHHHHHHHH
Confidence 5777666663 333334434443322345899999999999887654211 01 23456666666 478899
Q ss_pred cCCceecccCccceeeCCCCceEEeccCccccc
Q 001171 956 SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLA 988 (1133)
Q Consensus 956 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 988 (1133)
..|++|+|+||.||+++.++.++++|||++...
T Consensus 275 ~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred hCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 999999999999999999999999999998654
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.32 E-value=1.9e-12 Score=151.58 Aligned_cols=198 Identities=37% Similarity=0.548 Sum_probs=122.4
Q ss_pred EEeccccCCCCCCChhccCCCCCcEeeccCCcccccCCCCCCCCc-cCcEEEcccccccCCCCcccccccccceeecccC
Q 001171 511 TLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLV-GLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHN 589 (1133)
Q Consensus 511 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 589 (1133)
.++++.|.+. .....+..++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4555555543 22233444455666666666665 3334444443 6666666666665 34455666677777777777
Q ss_pred ccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCchhhhccCCCcEEEeecCCCCccCCc
Q 001171 590 QISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPE 669 (1133)
Q Consensus 590 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~ 669 (1133)
+++ .+|...+..++|+.|++++|+++ .+|..+.....|++|++++|.+. ..+..+.++.++..+.+.+|++.. .+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccc
Confidence 776 44444445667777777777776 46655555556777777777543 456666777777777777777763 356
Q ss_pred cccCcccccccccccccccccCCccccccccCcccccccccccccCCc
Q 001171 670 SFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNNLEGEIPK 717 (1133)
Q Consensus 670 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 717 (1133)
.++.+++|++|++++|.++. ++. ++.+.+|+.|++++|.+....|.
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchh
Confidence 66777777777777777763 333 67777777777777777765554
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=3e-12 Score=149.97 Aligned_cols=109 Identities=35% Similarity=0.497 Sum_probs=47.9
Q ss_pred CCccCcEEEcccccccCCCCcccccccccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCee
Q 001171 553 SLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKL 632 (1133)
Q Consensus 553 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 632 (1133)
.+++|+.|++++|+++ .+|........|++|.+++|++. ..+..+..+.++..+.+.+|++.. .+..++.++.++.|
T Consensus 184 ~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L 260 (394)
T COG4886 184 NLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETL 260 (394)
T ss_pred hhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhcccccccee
Confidence 3344444444444443 23333333333444444444322 233334444444444444444442 23444444445555
Q ss_pred ecCCCcccCcCchhhhccCCCcEEEeecCCCCcc
Q 001171 633 DLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGR 666 (1133)
Q Consensus 633 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 666 (1133)
++++|.++ .++. ++.+.+++.|++++|.+...
T Consensus 261 ~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 261 DLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred cccccccc-cccc-ccccCccCEEeccCcccccc
Confidence 55555554 2222 44455555555555555433
No 463
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.21 E-value=2.2e-13 Score=143.39 Aligned_cols=243 Identities=24% Similarity=0.322 Sum_probs=129.2
Q ss_pred chhhcccccCcEEEcccCcccC----CCCccccCCCCcceEeccCCcccCcCCCccccccchhhhhhcccccCCCccCcc
Q 001171 88 TDQLADLHELRKLSLHSNHLNG----SIPASLHQCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISADI 163 (1133)
Q Consensus 88 ~~~l~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~ 163 (1133)
-+.+.....+++|+|++|.+.- .+-..+.+.++|+..++|+ -|+| ..-..+
T Consensus 23 ~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftG------------------------R~~~Ei 77 (382)
T KOG1909|consen 23 EEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTG------------------------RLKDEI 77 (382)
T ss_pred HHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcC------------------------CcHHHH
Confidence 3445566777777777777652 3344455556666666654 2333 222222
Q ss_pred CCcceEEEccCCcCCCCCCCCCCCCCcCcEEeccCCcCCCCCc----ccccCccccceEecccccccCCCC-ccccCccc
Q 001171 164 SPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVP----ASVGQLQELEYLWLDSNHLYGTLP-SAISNCSS 238 (1133)
Q Consensus 164 ~~~l~~L~Ls~N~~~~~~p~~~~~l~~L~~L~ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~ 238 (1133)
|+.|+.| ...+...++|++||||+|-|.-.-+ +-+.++.+|++|+|.+|.+. ..- ..++ ..
T Consensus 78 ~e~L~~l-----------~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~--~a 143 (382)
T KOG1909|consen 78 PEALKML-----------SKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLG--RA 143 (382)
T ss_pred HHHHHHH-----------HHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHH--HH
Confidence 2222211 1222333456666666665542222 22445666777777766553 111 1111 12
Q ss_pred cceeeccccccCCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCcccccc
Q 001171 239 LVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLE 318 (1133)
Q Consensus 239 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~ 318 (1133)
|.+|. .|+. ...-+.|+++..++|++.. -+...+...|..++.|+.+.+.+|.|...
T Consensus 144 l~~l~--~~kk-------~~~~~~Lrv~i~~rNrlen-~ga~~~A~~~~~~~~leevr~~qN~I~~e------------- 200 (382)
T KOG1909|consen 144 LFELA--VNKK-------AASKPKLRVFICGRNRLEN-GGATALAEAFQSHPTLEEVRLSQNGIRPE------------- 200 (382)
T ss_pred HHHHH--HHhc-------cCCCcceEEEEeecccccc-ccHHHHHHHHHhccccceEEEecccccCc-------------
Confidence 33332 2221 2234577888888888753 34333344445555666666666555321
Q ss_pred EEeccCCcccccCCchhhcccccceeeccCceeecc----cCcccCCCCCCcEEEccCCcccccCchhh-----ccCCCc
Q 001171 319 VLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGN----LPAAVGSLDKLEVLRVANNSLSGLVPDEI-----AKCSLL 389 (1133)
Q Consensus 319 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L 389 (1133)
.+ .+.-..|..+++|++|||.+|.++.. +...+..+++|++|++++|.++..-...| ...++|
T Consensus 201 -------G~-~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L 272 (382)
T KOG1909|consen 201 -------GV-TALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSL 272 (382)
T ss_pred -------hh-HHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCC
Confidence 01 11235678888888888888887632 23456667778888888887775443333 234566
Q ss_pred cEEEccCCccc
Q 001171 390 QMFDLEGNRFS 400 (1133)
Q Consensus 390 ~~L~Ls~N~l~ 400 (1133)
++|.|.+|.|+
T Consensus 273 ~vl~l~gNeIt 283 (382)
T KOG1909|consen 273 EVLELAGNEIT 283 (382)
T ss_pred ceeccCcchhH
Confidence 66666666664
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.20 E-value=5.8e-11 Score=121.29 Aligned_cols=127 Identities=20% Similarity=0.173 Sum_probs=95.6
Q ss_pred ccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhccCCCee-eEEEEEeCCCCcEEEEEeccCCCCH
Q 001171 842 ENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLT-VLRGYYAGPPDVRLLVYDYMPNGNL 920 (1133)
Q Consensus 842 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv-~l~~~~~~~~~~~~lV~e~~~~gsL 920 (1133)
.+.++.|.++.||+++.. +..|++|...........+.+|+++++.+.+..++ +++.+. .. ..++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-~~--~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD-PE--TGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe-CC--CCeEEEEecCCCcc
Confidence 356899999999999876 77899999865443334578899999999765554 344433 22 23799999999876
Q ss_pred HHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCc-----eecccCccceeeCCCCceEEeccCccc
Q 001171 921 ATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDM-----VHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 921 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~i-----vH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
.+. . . ....++.+++++++.||+.++ +|+|++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~-~---------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTE-D---------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccc-c---------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 542 0 0 112356789999999999885 9999999999999 6789999999763
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.17 E-value=6.9e-11 Score=138.99 Aligned_cols=142 Identities=16% Similarity=0.213 Sum_probs=96.8
Q ss_pred cCCCcccccccccceeEEEEEECC-ceEEEEEEcccCCcC----------------------------------------
Q 001171 837 RQFDEENVLSRGRYGLIFKASYQD-GMVLSIRRLRDGTID---------------------------------------- 875 (1133)
Q Consensus 837 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~---------------------------------------- 875 (1133)
..|+. +.||+|++|.||+|++++ |+.||||+.+.+...
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35666 789999999999999987 999999998644210
Q ss_pred -HHHHHHHHHHHhhcc----CCCeeeEEEEEeCCCCcEEEEEeccCCCCHHHHH--HhhccCCCCCCChHHHHHHHHHHH
Q 001171 876 -ENTFRKEAEALGKVK----HRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLL--QEASHQDGHVLNWPMRHLISLGLA 948 (1133)
Q Consensus 876 -~~~~~~E~~~l~~l~----hpniv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l--~~~~~~~~~~l~~~~~~~i~~~ia 948 (1133)
+-++.+|+..+.+++ +...+.+-.+|.+-....++||||++|+.+.++- ...+ .+. ..++...+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g------~d~---~~la~~~v 269 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG------TDM---KLLAERGV 269 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC------CCH---HHHHHHHH
Confidence 012455666666663 4445555555544334458999999999998742 2211 111 12222222
Q ss_pred -HHHHHHhcCCceecccCccceeeCCCC----ceEEeccCccccc
Q 001171 949 -RGLSFLHSLDMVHGDIKPQNVLFDADF----EAHLSEFGLDRLA 988 (1133)
Q Consensus 949 -~~L~~LH~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a~~~ 988 (1133)
.-+..++..|++|+|+||.||+++.++ .+++.|||++...
T Consensus 270 ~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 270 EVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 223344579999999999999999888 8999999998654
No 466
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.16 E-value=9.2e-12 Score=127.55 Aligned_cols=137 Identities=26% Similarity=0.323 Sum_probs=101.3
Q ss_pred cccccccccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCchhhhccCC
Q 001171 573 ATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSS 652 (1133)
Q Consensus 573 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 652 (1133)
..+...+.|++||||+|.|+ .+.+...-.+.++.|++++|.|+. + ..+..+++|+.||||+|.++ .+..+-.++-+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 33444566788888888887 555666667888888888888872 2 23777888888888888887 56666667788
Q ss_pred CcEEEeecCCCCccCCccccCccccccccccccccccc-CCccccccccCcccccccccccccC
Q 001171 653 LVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGA-IPADLALISSLRYLNLSRNNLEGEI 715 (1133)
Q Consensus 653 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~ls~N~l~~~~ 715 (1133)
.+.|.|+.|.|.. -..+.++-+|..||+++|++... -...+++++-|+.+.|.+|++.+.+
T Consensus 354 IKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 354 IKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred EeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 8888888888763 24567788888888888888632 2346788888999999999998643
No 467
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=7.8e-11 Score=122.82 Aligned_cols=209 Identities=19% Similarity=0.301 Sum_probs=140.1
Q ss_pred HHHHHhhccCCCeeeEEEEEeCCC----CcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcC
Q 001171 882 EAEALGKVKHRNLTVLRGYYAGPP----DVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSL 957 (1133)
Q Consensus 882 E~~~l~~l~hpniv~l~~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~ 957 (1133)
-..-+-++.|.|+|+++.|+.+.. ....++.|||..|++.+++++.+... ..+......+++-||..||.|||+-
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~-~a~~~~~wkkw~tqIlsal~yLhs~ 195 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ-KALFQKAWKKWCTQILSALSYLHSC 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh-hhhhHHHHHHHHHHHHhhhhhhhcc
Confidence 344466678999999999987542 23478999999999999999866532 3466777788999999999999976
Q ss_pred --CceecccCccceeeCCCCceEEeccCcccccccCC-CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHH
Q 001171 958 --DMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP-AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEI 1034 (1133)
Q Consensus 958 --~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el 1034 (1133)
.|+|+++.-+-|++..+|-+|++--.-........ ..........+-++|.|||.-.....+.++|||+||+...||
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 49999999999999999988875211100000000 000011122466799999987777778899999999999999
Q ss_pred HhCCCC-CccCChhhHHHHHHHHhhhccccccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHh
Q 001171 1035 LTGRKP-VMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLE 1112 (1133)
Q Consensus 1035 ~tg~~P-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le 1112 (1133)
..+..- -...+.-.....+.. .......++. ...+.+|++..|..||+|.+++.+.-
T Consensus 276 ailEiq~tnseS~~~~ee~ia~------~i~~len~lq---------------r~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 276 AILEIQSTNSESKVEVEENIAN------VIIGLENGLQ---------------RGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred HHheeccCCCcceeehhhhhhh------heeeccCccc---------------cCcCcccccCCCCCCcchhhhhcCce
Confidence 887642 111111110000000 0001111111 15678899999999999999886543
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.13 E-value=1.2e-11 Score=126.73 Aligned_cols=134 Identities=31% Similarity=0.336 Sum_probs=106.4
Q ss_pred CCCCccCcEEEcccccccCCCCcccccccccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccC
Q 001171 551 FSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIK 630 (1133)
Q Consensus 551 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 630 (1133)
......|++||||+|.|+ .+..+..-.|.++.|++|+|.|... ..+..+++|+.|||++|.++. +..+=..+.+++
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCEe
Confidence 344567888888888887 4566777788899999999998733 337888999999999998873 555555678899
Q ss_pred eeecCCCcccCcCchhhhccCCCcEEEeecCCCCcc-CCccccCccccccccccccccccc
Q 001171 631 KLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGR-IPESFSKLSNLTTLNLSTNRLSGA 690 (1133)
Q Consensus 631 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~ 690 (1133)
.|.|++|.|.. -..+.++-+|..||+++|+|... -...+++++-|+++.|.+|.+.+.
T Consensus 356 tL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 356 TLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred eeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 99999999873 24577888999999999999752 235789999999999999999853
No 469
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.11 E-value=9.2e-12 Score=145.80 Aligned_cols=244 Identities=29% Similarity=0.342 Sum_probs=114.5
Q ss_pred CccccceEecccccccCCCCccccCccccceeeccccccCCCCCCcccCcCcccEEEcccCCccCCcccccccCcccccc
Q 001171 211 QLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNIS 290 (1133)
Q Consensus 211 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~ 290 (1133)
.+..++.+++..|.+. .+-..+..+.+|+.|++.+|+|..+. ..+..+++|++|+|++|+|+...+. ..++
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i~~l-------~~l~ 140 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKLEGL-------STLT 140 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhcc-cchhhhhcchheeccccccccccch-------hhcc
Confidence 3444444455555554 22233445555556666666555432 1145566666666666666544332 2334
Q ss_pred cccEEeccCCcccccccCCCCCccccccEEeccCCcccccCC-chhhcccccceeeccCceeecccCcccCCCCCCcEEE
Q 001171 291 SLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFP-SWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLR 369 (1133)
Q Consensus 291 ~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 369 (1133)
.|+.|++.+|.++.. ..+..+..|+.+++++|++..+.+ . ...+.+|+.+++.+|.+.. ...+..+..+..++
T Consensus 141 ~L~~L~l~~N~i~~~---~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~ 214 (414)
T KOG0531|consen 141 LLKELNLSGNLISDI---SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLS 214 (414)
T ss_pred chhhheeccCcchhc---cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhh
Confidence 455555555555443 223334555566666666665544 2 3555566666666666542 12333344444445
Q ss_pred ccCCcccccCchhhccCC--CccEEEccCCcccccCCCccCCCCCCcEEEccCCcCccccCccccCccccceeecccccc
Q 001171 370 VANNSLSGLVPDEIAKCS--LLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDI 447 (1133)
Q Consensus 370 L~~n~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i 447 (1133)
+..|.++...+ +..+. +|+.+++++|++.. ++ ..+..+.++..|++.+|++
T Consensus 215 l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~------------------------~~~~~~~~l~~l~~~~n~~ 267 (414)
T KOG0531|consen 215 LLDNKISKLEG--LNELVMLHLRELYLSGNRISR-SP------------------------EGLENLKNLPVLDLSSNRI 267 (414)
T ss_pred cccccceeccC--cccchhHHHHHHhcccCcccc-cc------------------------ccccccccccccchhhccc
Confidence 55555543221 11111 24555555555541 11 3334444555555555544
Q ss_pred cccCChhhcCCCCCcEEecccCcCCC---CCCCC-CCCCCCCcEEEcccCCCccc
Q 001171 448 RGNIPEEITRLSNLTTLNLSYNKFGG---KVPYD-VGNLKGLLVLNLSASGFSGK 498 (1133)
Q Consensus 448 ~~~~~~~l~~l~~L~~L~Ls~N~l~~---~~~~~-~~~l~~L~~L~L~~N~l~~~ 498 (1133)
... ..+.....+..+.+..|.+.. ..... .+..+.++.+.+..|.+...
T Consensus 268 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 268 SNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred ccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccc
Confidence 421 223333444444455554431 11111 34455566666666655543
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.11 E-value=1.2e-11 Score=144.77 Aligned_cols=242 Identities=28% Similarity=0.323 Sum_probs=131.5
Q ss_pred CCCcEEecccCcCCCCCCCCCCCCCCCcEEEcccCCCccccCCCcCCcccccEEeccccCCCCCCChhccCCCCCcEeec
Q 001171 459 SNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSL 538 (1133)
Q Consensus 459 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 538 (1133)
..++.+++..|.+.. +-..+..+++|..|++.+|+|.. +...+..+++|++|++++|.|+... .+..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhhee
Confidence 334444444444441 22334445555555555555542 2222556677777777777776432 2455555777777
Q ss_pred cCCcccccCCCCCCCCccCcEEEcccccccCCCC-cccccccccceeecccCccCCCCCccccCCCCccEEEecCCcccC
Q 001171 539 EENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIP-ATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTG 617 (1133)
Q Consensus 539 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 617 (1133)
++|.|+.. ..+..++.|+.+++++|+++..-+ . ...+.+|+.+++.+|.+... ..+..+..+..+++..|.++.
T Consensus 148 ~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 148 SGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISK 222 (414)
T ss_pred ccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhccccccee
Confidence 77777632 345557777777777777764333 1 45666777777777777522 233444555555777777663
Q ss_pred CCcccccccc--ccCeeecCCCcccCcCchhhhccCCCcEEEeecCCCCccCCccccCccccccccccccccccc--CCc
Q 001171 618 NIPVDISHLS--RIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGA--IPA 693 (1133)
Q Consensus 618 ~~p~~l~~l~--~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~ 693 (1133)
.-+ +..+. .|+.+++++|.+. .++..+..+..+..|++.+|++... ..+.....+..+.+..|.+... +..
T Consensus 223 ~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (414)
T KOG0531|consen 223 LEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQ 297 (414)
T ss_pred ccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhc
Confidence 221 22222 2677777777776 4434555566666666666666532 2334455555666666655421 111
Q ss_pred c--ccccccCccccccccccccc
Q 001171 694 D--LALISSLRYLNLSRNNLEGE 714 (1133)
Q Consensus 694 ~--l~~l~~L~~L~ls~N~l~~~ 714 (1133)
. ....+.++.+.+.+|++...
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 298 EYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred cccccccccccccccccCccccc
Confidence 1 33344555555555555443
No 471
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.09 E-value=2.2e-12 Score=135.90 Aligned_cols=197 Identities=22% Similarity=0.281 Sum_probs=113.6
Q ss_pred cCccccceeecccccccccCChh----hcCCCCCcEEecccCcCCCCCCCCCCCCCCCcEEEcccCCCccccCCCcCCcc
Q 001171 432 GNLSQLETLNLSENDIRGNIPEE----ITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLM 507 (1133)
Q Consensus 432 ~~l~~L~~L~L~~N~i~~~~~~~----l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 507 (1133)
..+++|++|+||+|-+.-..+.. +.++.+|++|.|.+|.+...--..++ ..|..|. . ..-.++-+
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~-------~kk~~~~~ 157 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--V-------NKKAASKP 157 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--H-------HhccCCCc
Confidence 34456666666666665443332 23456666666666655411111111 0111111 1 11233456
Q ss_pred cccEEeccccCCCCCCC----hhccCCCCCcEeeccCCccccc----CCCCCCCCccCcEEEcccccccCCC----Cccc
Q 001171 508 RLTTLDLSNQNLSGELP----IELFGLPSLQVVSLEENNLSGD----VPEGFSSLVGLQYLNLSDNAFTGDI----PATY 575 (1133)
Q Consensus 508 ~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~ 575 (1133)
+|++++..+|++..... ..|...+.|+.+.+..|.|... +...|..+++|+.|||.+|-|+... ...+
T Consensus 158 ~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL 237 (382)
T KOG1909|consen 158 KLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKAL 237 (382)
T ss_pred ceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHh
Confidence 78888888888874332 3445668888888888887532 2345677888888888888887432 3455
Q ss_pred ccccccceeecccCccCCCCCccc-----cCCCCccEEEecCCcccCC----CccccccccccCeeecCCCcc
Q 001171 576 GFLRSLVFLSLSHNQISGMIPAEL-----GACSALEVLELRSNHFTGN----IPVDISHLSRIKKLDLGQNKL 639 (1133)
Q Consensus 576 ~~l~~L~~L~Ls~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l 639 (1133)
..+++|++|++++|.+.......| ...++|++|.|.+|.++.. +...+...+.|+.|+|++|.+
T Consensus 238 ~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 238 SSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 566777777777777775544433 2356677777777766521 222233455566666666666
No 472
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.09 E-value=1.2e-10 Score=132.90 Aligned_cols=247 Identities=22% Similarity=0.295 Sum_probs=170.9
Q ss_pred cCCCccccccc--ccceeEEEEEE---CCceEEEEEEcccC---CcCHHHHHHHHHHHhhc-cCCCeeeEEEEEeCCCCc
Q 001171 837 RQFDEENVLSR--GRYGLIFKASY---QDGMVLSIRRLRDG---TIDENTFRKEAEALGKV-KHRNLTVLRGYYAGPPDV 907 (1133)
Q Consensus 837 ~~~~~~~~lg~--G~~g~Vy~~~~---~~g~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 907 (1133)
..|.+.+.+|. |.+|.||.+.. .++..+|+|+-+.. ......=.+|+...+++ .|++.|+.+..+.+.+ .
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~-~ 192 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG-I 192 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC-c
Confidence 35677888999 99999999976 35788898884321 12223335677777777 4999999777777654 4
Q ss_pred EEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHH----HHHHHhcCCceecccCccceeeCCC-CceEEecc
Q 001171 908 RLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLAR----GLSFLHSLDMVHGDIKPQNVLFDAD-FEAHLSEF 982 (1133)
Q Consensus 908 ~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----~L~~LH~~~ivH~Dlkp~NIll~~~-~~~kl~Df 982 (1133)
.++-+|++ +.++.++.+.-. ..++....+.+..+..+ |+.++|+.+++|-|+||.||+...+ ..++.+||
T Consensus 193 lfiqtE~~-~~sl~~~~~~~~----~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 193 LFIQTELC-GESLQSYCHTPC----NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred ceeeeccc-cchhHHhhhccc----ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCc
Confidence 47888888 578888776533 23666677777777777 9999999999999999999999999 88999999
Q ss_pred CcccccccCCCCCC--CCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhc
Q 001171 983 GLDRLAIATPAEAS--SSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRG 1060 (1133)
Q Consensus 983 g~a~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 1060 (1133)
|+............ ......|...|++||.. .+-++.+.|+|++|.+..+..++..+....-... | ...+..
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~---W--~~~r~~ 341 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNSS---W--SQLRQG 341 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCCC---c--cccccc
Confidence 99876554432111 12223677899999987 4567899999999999999999877653221110 1 111111
Q ss_pred cc-cccccCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHH
Q 001171 1061 QI-SELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIV 1108 (1133)
Q Consensus 1061 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl 1108 (1133)
.+ .++++..-. + ....+..+++.+|..|++.+++.
T Consensus 342 ~ip~e~~~~~s~----------~---l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 342 YIPLEFCEGGSS----------S---LRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred cCchhhhcCcch----------h---hhhHHHHhcCcchhhhhHHHHHh
Confidence 11 112211111 0 01256678999999999887665
No 473
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.07 E-value=1.1e-09 Score=111.61 Aligned_cols=133 Identities=14% Similarity=0.192 Sum_probs=93.8
Q ss_pred cccccccceeEEEEEECC-------ceEEEEEEcccCCc----------------------C-HHHH----HHHHHHHhh
Q 001171 843 NVLSRGRYGLIFKASYQD-------GMVLSIRRLRDGTI----------------------D-ENTF----RKEAEALGK 888 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~----------------------~-~~~~----~~E~~~l~~ 888 (1133)
..||.|.-+.||.|...+ +..+|||..+.... + .+.+ ++|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999996543 47899998632110 0 1223 389999999
Q ss_pred ccC--CCeeeEEEEEeCCCCcEEEEEeccCCCCHHH-HHHhhccCCCCCCChHHHHHHHHHHHHHHHHH-hcCCceeccc
Q 001171 889 VKH--RNLTVLRGYYAGPPDVRLLVYDYMPNGNLAT-LLQEASHQDGHVLNWPMRHLISLGLARGLSFL-HSLDMVHGDI 964 (1133)
Q Consensus 889 l~h--pniv~l~~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~ivH~Dl 964 (1133)
+.. -++..++++ ...++||||+.++.+.. .++. ..++......+..+++.++.++ |+.||||||+
T Consensus 83 l~~~Gv~vP~pi~~-----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL-----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe-----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 853 344445443 12389999997654322 2221 1133445566778999999999 8999999999
Q ss_pred CccceeeCCCCceEEeccCcccc
Q 001171 965 KPQNVLFDADFEAHLSEFGLDRL 987 (1133)
Q Consensus 965 kp~NIll~~~~~~kl~Dfg~a~~ 987 (1133)
++.||+++ ++.+.++|||.+..
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCcee
Confidence 99999996 46899999998754
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.06 E-value=1.1e-10 Score=116.61 Aligned_cols=81 Identities=28% Similarity=0.372 Sum_probs=20.4
Q ss_pred cccEEeccCCcccccCCchhh-cccccceeeccCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEc
Q 001171 316 VLEVLDLQNNRIRAVFPSWLT-NVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDL 394 (1133)
Q Consensus 316 ~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 394 (1133)
.+++|+|++|+|+.| +.+. .+.+|+.|||++|.|+.. +.+..+++|++|++++|+|+.+.+.....+++|++|+|
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 455666666666655 2344 456666677777766633 23555666666666666666442222234666666666
Q ss_pred cCCccc
Q 001171 395 EGNRFS 400 (1133)
Q Consensus 395 s~N~l~ 400 (1133)
++|+|.
T Consensus 96 ~~N~I~ 101 (175)
T PF14580_consen 96 SNNKIS 101 (175)
T ss_dssp TTS---
T ss_pred cCCcCC
Confidence 666665
No 475
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=2.4e-11 Score=131.46 Aligned_cols=162 Identities=22% Similarity=0.229 Sum_probs=82.3
Q ss_pred CcCCcccccEEeccccCCCCCCC--hhccCCCCCcEeeccCCcccccCCCCC-CCCccCcEEEcccccccCC-CCccccc
Q 001171 502 SIGSLMRLTTLDLSNQNLSGELP--IELFGLPSLQVVSLEENNLSGDVPEGF-SSLVGLQYLNLSDNAFTGD-IPATYGF 577 (1133)
Q Consensus 502 ~~~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~-~~~~~~~ 577 (1133)
....+++++.||||.|-+....+ .-...+|+|+.|+|+.|++.....+.. ..++.|+.|.|+.|.++-. +......
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~ 220 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLT 220 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHh
Confidence 34456666666666666553211 223356677777777776652221111 2345666677777666521 1122345
Q ss_pred ccccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCc--cccccccccCeeecCCCcccCc-Cchh-----hhc
Q 001171 578 LRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIP--VDISHLSRIKKLDLGQNKLSGE-IPKE-----ISK 649 (1133)
Q Consensus 578 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p--~~l~~l~~L~~L~Ls~N~l~~~-~p~~-----l~~ 649 (1133)
+|+|+.|+|..|..-..-.....-+..|+.|||++|++.. .+ ...+.++.|+.|+++.+.+... +|+. ...
T Consensus 221 fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~ 299 (505)
T KOG3207|consen 221 FPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHT 299 (505)
T ss_pred CCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhccccCcchhcCCCccchhhhcc
Confidence 5666666666664222222223335556666666666553 22 2345566666666666665531 2222 233
Q ss_pred cCCCcEEEeecCCCC
Q 001171 650 CSSLVSLTLDMNSLS 664 (1133)
Q Consensus 650 l~~L~~L~Ls~N~l~ 664 (1133)
+++|++|+++.|++.
T Consensus 300 f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 300 FPKLEYLNISENNIR 314 (505)
T ss_pred cccceeeecccCccc
Confidence 455555555555553
No 476
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.05 E-value=1.2e-10 Score=116.26 Aligned_cols=139 Identities=29% Similarity=0.387 Sum_probs=44.2
Q ss_pred ccCCcccccCCchhhcccccceeeccCceeecccCcccC-CCCCCcEEEccCCcccccCchhhccCCCccEEEccCCccc
Q 001171 322 LQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVG-SLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFS 400 (1133)
Q Consensus 322 L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 400 (1133)
|..+.|+.+ ..+.+..++++|+|++|+|+.+ +.++ .+.+|+.|+|++|.|+.+ +.+..+++|++|++++|+|+
T Consensus 4 lt~~~i~~~--~~~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 4 LTANMIEQI--AQYNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ------------------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---
T ss_pred ccccccccc--cccccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC
Confidence 344555554 2356777889999999999843 3455 578899999999999865 45777888888898888888
Q ss_pred ccCCCccCCCCCCcEEEccCCcCccccC-ccccCccccceeecccccccccCC---hhhcCCCCCcEEec
Q 001171 401 GQVPAFLGGIRGLKIVSLGRNMFSGLIP-LSFGNLSQLETLNLSENDIRGNIP---EEITRLSNLTTLNL 466 (1133)
Q Consensus 401 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~i~~~~~---~~l~~l~~L~~L~L 466 (1133)
...+.....+++|+.|+|++|+|..... ..+..+++|+.|+|.+|.+....- ..+..+++|+.||-
T Consensus 78 ~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 78 SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 5432222457788888888888765322 345566777777777777763311 13445666666653
No 477
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.04 E-value=1.8e-09 Score=124.27 Aligned_cols=165 Identities=19% Similarity=0.235 Sum_probs=121.4
Q ss_pred EECCceEEEEEEcccCCcC-HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCC
Q 001171 857 SYQDGMVLSIRRLRDGTID-ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVL 935 (1133)
Q Consensus 857 ~~~~g~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l 935 (1133)
+..++..|.|+........ .+...+.++.++.++||+|+++++.++..+ ..|+|+|.+. .|..++++.
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~-~~ylvTErV~--Pl~~~lk~l-------- 101 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG-TLYLVTERVR--PLETVLKEL-------- 101 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC-ceEEEeeccc--cHHHHHHHh--------
Confidence 4446778888777544331 345778889999999999999999887764 5599999984 577788763
Q ss_pred ChHHHHHHHHHHHHHHHHHh-cCCceecccCccceeeCCCCceEEeccCcccccccCCCCCCCCCCCCCCCCccCccccC
Q 001171 936 NWPMRHLISLGLARGLSFLH-SLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAAS 1014 (1133)
Q Consensus 936 ~~~~~~~i~~~ia~~L~~LH-~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 1014 (1133)
........++||+.||.||| +.+++|++|....|++++.|+.||++|.++........ ......--..|..|+.+.
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~---~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA---PAKSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc---ccccchhhhcccChhhcC
Confidence 34556667899999999997 56799999999999999999999999988743321111 111112223566777553
Q ss_pred CCCCCCCCchhHHHHHHHHHHhC
Q 001171 1015 TGQPTKEADVYSFGIVLLEILTG 1037 (1133)
Q Consensus 1015 ~~~~~~~~DvwSlG~il~el~tg 1037 (1133)
... -..|.|.|||++||++.|
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCc
Confidence 322 346999999999999998
No 478
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=2.9e-09 Score=103.98 Aligned_cols=129 Identities=23% Similarity=0.390 Sum_probs=93.6
Q ss_pred cccccccceeEEEEEECCceEEEEEE-cccCCcC--------HHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEEEe
Q 001171 843 NVLSRGRYGLIFKASYQDGMVLSIRR-LRDGTID--------ENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYD 913 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~g~~vavK~-~~~~~~~--------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV~e 913 (1133)
..+++|+-+.+|.+.+.+.. +++|. +++.... ...-.+|+.++.+++--.|....-|..++ ....++||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~-~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP-DNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC-CCCEEEEE
Confidence 35889999999999876434 44443 4433322 23567899999998654443333333333 33479999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccc
Q 001171 914 YMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDR 986 (1133)
Q Consensus 914 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 986 (1133)
|++|-.|.+.+... +..++..|-.-+.-||..||+|+|+.++||.+..+. +.++|||++.
T Consensus 80 ~I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~ 139 (204)
T COG3642 80 YIEGELLKDALEEA------------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGE 139 (204)
T ss_pred EeCChhHHHHHHhc------------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccc
Confidence 99998888888753 134566777788899999999999999999997765 9999999975
No 479
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.98 E-value=4.7e-10 Score=84.14 Aligned_cols=41 Identities=44% Similarity=0.931 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHhCC-CCCCCccCCCCCCCCCCCccceeeeC
Q 001171 29 LSEIQALTSFKLHLK-DPLGALDGWDSSTPSAPCDWRGIVCY 69 (1133)
Q Consensus 29 ~~~~~~l~~~k~~~~-~~~~~l~~w~~~~~~~~c~w~gv~c~ 69 (1133)
++|++||++||+++. ||.+.+.+|+.+...+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 579999999999997 67789999987533589999999996
No 480
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.98 E-value=3.9e-10 Score=140.34 Aligned_cols=129 Identities=28% Similarity=0.384 Sum_probs=90.1
Q ss_pred cccceeeccCceeecccCcccCCCCCCcEEEccCCc--ccccCchhhccCCCccEEEccCCcccccCCCccCCCCCCcEE
Q 001171 339 TSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNS--LSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIV 416 (1133)
Q Consensus 339 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 416 (1133)
...+...+-+|++. .++.... .++|++|-+..|. +.....+.|..++.|+.|||++|.=-+.+|..++++-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 45566666667665 3333332 3367777777775 554445567778888888888876666778888888888888
Q ss_pred EccCCcCccccCccccCccccceeecccccccccCChhhcCCCCCcEEecccCc
Q 001171 417 SLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNK 470 (1133)
Q Consensus 417 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~ 470 (1133)
+|++..++ .+|..++++.+|.+|++..+.-...+|.....+++|++|.+-.-.
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 88888877 567778888888888888776555556666667777777776543
No 481
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=1.1e-10 Score=126.60 Aligned_cols=190 Identities=27% Similarity=0.319 Sum_probs=94.4
Q ss_pred hhhcccccceeeccCceeecccC--cccCCCCCCcEEEccCCcccccCchh-hccCCCccEEEccCCcccccCCCccCCC
Q 001171 334 WLTNVTSLRVMDLSGNFFSGNLP--AAVGSLDKLEVLRVANNSLSGLVPDE-IAKCSLLQMFDLEGNRFSGQVPAFLGGI 410 (1133)
Q Consensus 334 ~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 410 (1133)
....|++++.||||.|-+....| .....|++|+.|+|+.|++....... -..+++|+.|.|+.|.++..-
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~------- 213 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKD------- 213 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHH-------
Confidence 45566777777777776653222 23345666666666666654221111 112334444444444443110
Q ss_pred CCCcEEEccCCcCccccCccccCccccceeecccccccccCChhhcCCCCCcEEecccCcCCCCC-CCCCCCCCCCcEEE
Q 001171 411 RGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKV-PYDVGNLKGLLVLN 489 (1133)
Q Consensus 411 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~ 489 (1133)
+......+++|+.|+|..|............+..|++|||++|++-... -...+.++.|+.|+
T Consensus 214 ----------------V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 214 ----------------VQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred ----------------HHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 1111223344444444444322222223333444555555555443211 12344555566666
Q ss_pred cccCCCccc-cCCC-----cCCcccccEEeccccCCCCC-CChhccCCCCCcEeeccCCccccc
Q 001171 490 LSASGFSGK-IPGS-----IGSLMRLTTLDLSNQNLSGE-LPIELFGLPSLQVVSLEENNLSGD 546 (1133)
Q Consensus 490 L~~N~l~~~-~~~~-----~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~ 546 (1133)
++.+.+... .|+. ...+++|++|+++.|++... .-..+..+++|+.|.+..|.++.+
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 666655433 2222 34567788888888887521 112455667888888888888743
No 482
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.92 E-value=8.8e-10 Score=137.26 Aligned_cols=272 Identities=24% Similarity=0.313 Sum_probs=156.9
Q ss_pred ccccEEeccCCcccccccCCCCCccccccEEeccCCc--ccccCCchhhcccccceeeccCceeecccCcccCCCCCCcE
Q 001171 290 SSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNR--IRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEV 367 (1133)
Q Consensus 290 ~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~--i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 367 (1133)
...+...+-+|.+..... ....+.|..|-+..|. +..+..+.|..++.|++|||++|.=-+.+|..++.|-+|++
T Consensus 523 ~~~rr~s~~~~~~~~~~~---~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAG---SSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hheeEEEEeccchhhccC---CCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 445555555555543321 1122258888888886 77777788999999999999988766789999999999999
Q ss_pred EEccCCcccccCchhhccCCCccEEEccCCcccccCCCccCCCCCCcEEEccCCcCc--cccCccccCccccceeecccc
Q 001171 368 LRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFS--GLIPLSFGNLSQLETLNLSEN 445 (1133)
Q Consensus 368 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N 445 (1133)
|+|++..++ .+|..+.++++|.+|++..+.-...+|.....+.+|++|.+...... ...-..+.++..|+.|.....
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecc
Confidence 999999998 56889999999999999988776666777778999999988776522 222223344455555544332
Q ss_pred cccccCChhhcCCCCCc----EEecccCcCCCCCCCCCCCCCCCcEEEcccCCCccccCCCcCC------cccccEEecc
Q 001171 446 DIRGNIPEEITRLSNLT----TLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGS------LMRLTTLDLS 515 (1133)
Q Consensus 446 ~i~~~~~~~l~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~Ls 515 (1133)
.. .+-..+..+..|. .+.+.++... ..+..++.+.+|+.|.+.++.+.......... ++++..+.+.
T Consensus 679 s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~ 755 (889)
T KOG4658|consen 679 SV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSIL 755 (889)
T ss_pred hh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhh
Confidence 22 1112222233322 2222222222 33445566666666666666654332222111 1122222222
Q ss_pred ccCCCCCCChhccCCCCCcEeeccCCcccccCCCCCCCCccCcEEEcccccccC
Q 001171 516 NQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTG 569 (1133)
Q Consensus 516 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 569 (1133)
++..- ..+.+....++|+.|.+..+.....+......+..+..+.+..+.+.+
T Consensus 756 ~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 756 NCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred ccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccccccc
Confidence 22111 122222334556666666555544444444444444444444444443
No 483
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.89 E-value=2.6e-08 Score=96.58 Aligned_cols=141 Identities=16% Similarity=0.267 Sum_probs=99.4
Q ss_pred cccccccccceeEEEEEECCceEEEEEE-cccCCc--------CHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEEE
Q 001171 841 EENVLSRGRYGLIFKASYQDGMVLSIRR-LRDGTI--------DENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLV 911 (1133)
Q Consensus 841 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~-~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~lV 911 (1133)
....+-+|+-+.|+++.+. |+.+.||. +.+... ..++..+|++.+.+++--.|....-++.+... ..++
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~-~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG-GQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC-CeEE
Confidence 4567889999999999987 66666654 333322 23567889999999864444333333333322 3799
Q ss_pred EeccCC-CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCc---eEEeccCccc
Q 001171 912 YDYMPN-GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFE---AHLSEFGLDR 986 (1133)
Q Consensus 912 ~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~ 986 (1133)
|||+++ .++.+++...-.. . ........++..|-+.+.-||..+|+|+||..+||++.+++. +.++|||++.
T Consensus 89 ME~~~g~~~vk~~i~~~~~~--~-~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMED--E-SEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EEeccchhHHHHHHHHHccC--c-ccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchh
Confidence 999976 3778887764321 1 222223567888999999999999999999999999976553 4799999873
No 484
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.87 E-value=8.4e-09 Score=110.44 Aligned_cols=138 Identities=23% Similarity=0.301 Sum_probs=98.9
Q ss_pred cccccccceeEEEEEECCceEEEEEEcccCCc--CHHHHHHHHHHHhhccCCC--eeeEEEEEeCCC--CcEEEEEeccC
Q 001171 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGTI--DENTFRKEAEALGKVKHRN--LTVLRGYYAGPP--DVRLLVYDYMP 916 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~~--~~~~lV~e~~~ 916 (1133)
+.|+.|.++.||++...+|+.+++|....... ....+.+|+++++.+.+.+ +.+++.+..... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999887778999999865433 3467899999999997643 455666665432 24489999999
Q ss_pred CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 001171 917 NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHS---------------------------------------- 956 (1133)
Q Consensus 917 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~---------------------------------------- 956 (1133)
|.++.+.+.. ..++...+..++.++++++.+||+
T Consensus 84 G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 84 GRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 8877654321 113444444555555555555552
Q ss_pred ----------------CCceecccCccceeeCC--CCceEEeccCccc
Q 001171 957 ----------------LDMVHGDIKPQNVLFDA--DFEAHLSEFGLDR 986 (1133)
Q Consensus 957 ----------------~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~ 986 (1133)
..++|+|+.|.||+++. ++.+.++||+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 34799999999999998 5668899999764
No 485
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.86 E-value=1.5e-09 Score=129.93 Aligned_cols=211 Identities=23% Similarity=0.248 Sum_probs=144.3
Q ss_pred hcCCCcccccccccceeEEEEEEC-CceEEEEEEcccC----CcCHHHHHHHHHHHhhccCCCeeeEEEEEeCCCCcEEE
Q 001171 836 TRQFDEENVLSRGRYGLIFKASYQ-DGMVLSIRRLRDG----TIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLL 910 (1133)
Q Consensus 836 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~~l 910 (1133)
.+.+.+.+-+-+|.++.++-+.-. .|...++|..... ..+.+...++-.+.-..+||-++....-+. .....++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~-~rsP~~L 881 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFP-CRSPLPL 881 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCC-CCCCcch
Confidence 345667778889999999888543 2433344333211 111223333444444445566654433221 2233489
Q ss_pred EEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 911 VYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 911 V~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
|++|..++++...++..+. .+..........+.++.+|||+..+.|||++|.|.+...+++.+++|||.......
T Consensus 882 ~~~~~~~~~~~Skl~~~~~-----~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGC-----LSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCCC-----cccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccc
Confidence 9999999999999987653 23333334455678899999999999999999999999999999999984322111
Q ss_pred C-CC---------------------------CCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCc
Q 001171 991 T-PA---------------------------EASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVM 1042 (1133)
Q Consensus 991 ~-~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~ 1042 (1133)
. .. .........||+.|.+||...+......+|.|++|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 00 0011234579999999999999999999999999999999999999998
Q ss_pred cCChhhHHHH
Q 001171 1043 FTQDEDIVKW 1052 (1133)
Q Consensus 1043 ~~~~~~~~~~ 1052 (1133)
....+.+.+.
T Consensus 1037 a~tpq~~f~n 1046 (1205)
T KOG0606|consen 1037 AETPQQIFEN 1046 (1205)
T ss_pred Ccchhhhhhc
Confidence 7766655533
No 486
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.83 E-value=3.9e-09 Score=120.77 Aligned_cols=247 Identities=19% Similarity=0.226 Sum_probs=163.1
Q ss_pred HhcCCCcccccccccceeEEEEEEC--CceEEEEEEcccCCcCH-H--HHHHHHHHHhhc-cCCCeeeEEEEEeCCCCcE
Q 001171 835 ATRQFDEENVLSRGRYGLIFKASYQ--DGMVLSIRRLRDGTIDE-N--TFRKEAEALGKV-KHRNLTVLRGYYAGPPDVR 908 (1133)
Q Consensus 835 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~-~--~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 908 (1133)
...+|..+..||.|.|+.|+....+ ++..|++|...++.... . .-..|+.+...+ .|.+++.....+..-+..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~- 341 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG- 341 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc-
Confidence 4557889999999999999998654 57899999986543321 1 123466666666 477777765544443333
Q ss_pred EEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCC-CceEEeccCcccc
Q 001171 909 LLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDAD-FEAHLSEFGLDRL 987 (1133)
Q Consensus 909 ~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~ 987 (1133)
|+=-||+++++........ ..++...++++..|++.++.++|++.++|+|+||+||++..+ +..+++|||.+..
T Consensus 342 ~ip~e~~~~~s~~l~~~~~-----~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVTS-----QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cCchhhhcCcchhhhhHHH-----HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence 6888999999887666332 336777788899999999999999999999999999999886 7779999998753
Q ss_pred cccCCCCCCCCCCCCCCCCc-cCccccCCCCCCCCCchhHHHHHHHHHHhCCCCCccCChhhHHHHHHHHhhhccccccc
Q 001171 988 AIATPAEASSSTTPIGSLGY-VSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELL 1066 (1133)
Q Consensus 988 ~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1133)
... .......++..| .+|+......+..+.|++|||..+.|..+|.. +.... ..|.. ++.+.+.
T Consensus 417 ~~~-----~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~-ls~~~----~~~~~--i~~~~~p--- 481 (524)
T KOG0601|consen 417 LAF-----SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP-LSESG----VQSLT--IRSGDTP--- 481 (524)
T ss_pred cce-----ecccccccccccccchhhccccccccccccccccccccccccCcc-cCccc----cccee--eeccccc---
Confidence 211 111111122233 25555566678899999999999999998754 32111 11100 0011000
Q ss_pred cCCcCCCCCCChhHHHHHHhHhhhhccCCCCCCCCCCHHHHHHHHhc
Q 001171 1067 EPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEG 1113 (1133)
Q Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~~li~~Cl~~dP~~RPs~~evl~~Le~ 1113 (1133)
.. +. ...++ ..+...+..+|+..||.+.+...+.+.
T Consensus 482 --~~----~~--~~~~~---q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 482 --NL----PG--LKLQL---QVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred --CC----Cc--hHHhh---hhhhhhhcCCccccchhhhhhcccchh
Confidence 00 00 01111 134556778999999999888766544
No 487
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.79 E-value=6.6e-08 Score=104.73 Aligned_cols=140 Identities=9% Similarity=0.084 Sum_probs=98.2
Q ss_pred cccccccceeEEEEEECCceEEEEEEcccCC------------cCHHHHHHHHHHHhhccCCCe--eeEEEEEeCC----
Q 001171 843 NVLSRGRYGLIFKASYQDGMVLSIRRLRDGT------------IDENTFRKEAEALGKVKHRNL--TVLRGYYAGP---- 904 (1133)
Q Consensus 843 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~------------~~~~~~~~E~~~l~~l~hpni--v~l~~~~~~~---- 904 (1133)
+++-+.....|+++.+ +|+.|.||+..... .....+.+|.+.+.++..-.| ...+++....
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444455777766 47789999764322 111247889999988853332 2334444321
Q ss_pred CCcEEEEEeccCCC-CHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC-------CCc
Q 001171 905 PDVRLLVYDYMPNG-NLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA-------DFE 976 (1133)
Q Consensus 905 ~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~-------~~~ 976 (1133)
....++|||++++. +|.+++..... ...+...+..++.+++..+..||..||+|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~---~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT---NPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCce
Confidence 22358999999876 89999864221 22455677789999999999999999999999999999975 467
Q ss_pred eEEeccCccc
Q 001171 977 AHLSEFGLDR 986 (1133)
Q Consensus 977 ~kl~Dfg~a~ 986 (1133)
+.++||+.++
T Consensus 184 ~~LIDl~r~~ 193 (268)
T PRK15123 184 LSVIDLHRAQ 193 (268)
T ss_pred EEEEECCccc
Confidence 8999999764
No 488
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.78 E-value=6.7e-09 Score=85.32 Aligned_cols=60 Identities=37% Similarity=0.556 Sum_probs=44.6
Q ss_pred cccEEeccCCcccccCCchhhcccccceeeccCceeecccCcccCCCCCCcEEEccCCcc
Q 001171 316 VLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSL 375 (1133)
Q Consensus 316 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l 375 (1133)
+|++|++++|+|+.+++++|.++++|++|++++|.|+...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 467777777777777777777777777777777777766666777777777777777764
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.76 E-value=6.5e-08 Score=98.56 Aligned_cols=123 Identities=20% Similarity=0.285 Sum_probs=80.8
Q ss_pred eEEEEEECCceEEEEEEcccCCcC---------------------------HHHHHHHHHHHhhccCCC--eeeEEEEEe
Q 001171 852 LIFKASYQDGMVLSIRRLRDGTID---------------------------ENTFRKEAEALGKVKHRN--LTVLRGYYA 902 (1133)
Q Consensus 852 ~Vy~~~~~~g~~vavK~~~~~~~~---------------------------~~~~~~E~~~l~~l~hpn--iv~l~~~~~ 902 (1133)
.||.|...+|..+|+|..+.+..+ ....++|++.|.++..-. +.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 489999988999999987432110 134678999999997653 44555442
Q ss_pred CCCCcEEEEEeccC--CCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHH-HhcCCceecccCccceeeCCCCceEE
Q 001171 903 GPPDVRLLVYDYMP--NGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSF-LHSLDMVHGDIKPQNVLFDADFEAHL 979 (1133)
Q Consensus 903 ~~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~-LH~~~ivH~Dlkp~NIll~~~~~~kl 979 (1133)
. .++||||++ |..+..+.... ++......++.+++..+.. +|+.||+|||+.+.||+++++ .+.+
T Consensus 80 ~----~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 R----NVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp T----TEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE
T ss_pred C----CEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEE
Confidence 1 279999998 54454433321 1133445677778875555 579999999999999999887 9999
Q ss_pred eccCcccc
Q 001171 980 SEFGLDRL 987 (1133)
Q Consensus 980 ~Dfg~a~~ 987 (1133)
+|||.+..
T Consensus 148 IDf~qav~ 155 (188)
T PF01163_consen 148 IDFGQAVD 155 (188)
T ss_dssp --GTTEEE
T ss_pred EecCccee
Confidence 99998753
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.70 E-value=5.3e-08 Score=101.05 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=98.1
Q ss_pred CCcccccccccceeEEEEEECCceEEEEEEcccCCc-----------------------CHHHHHHHHHHHhhccCC--C
Q 001171 839 FDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTI-----------------------DENTFRKEAEALGKVKHR--N 893 (1133)
Q Consensus 839 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~-----------------------~~~~~~~E~~~l~~l~hp--n 893 (1133)
+.++..||.|.-+.||.|...+|..+|||.=+.+.. +....++|.++|+++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456789999999999999999999999997533221 123567899999999654 4
Q ss_pred eeeEEEEEeCCCCcEEEEEeccCCCCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCC
Q 001171 894 LTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDA 973 (1133)
Q Consensus 894 iv~l~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~ 973 (1133)
+.+.+++ +.+.+||||++|-.|...- ++......++..|++-+...-+.||||+|+.+-||++++
T Consensus 173 VP~P~~~-----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW-----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc-----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEec
Confidence 5555443 4458999999885554321 123333445666666666666899999999999999999
Q ss_pred CCceEEeccCcc
Q 001171 974 DFEAHLSEFGLD 985 (1133)
Q Consensus 974 ~~~~kl~Dfg~a 985 (1133)
+|.+.++||--+
T Consensus 238 dg~~~vIDwPQ~ 249 (304)
T COG0478 238 DGDIVVIDWPQA 249 (304)
T ss_pred CCCEEEEeCccc
Confidence 999999999654
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.69 E-value=1.4e-08 Score=83.40 Aligned_cols=61 Identities=31% Similarity=0.514 Sum_probs=40.1
Q ss_pred cccceeeccCceeecccCcccCCCCCCcEEEccCCcccccCchhhccCCCccEEEccCCcc
Q 001171 339 TSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRF 399 (1133)
Q Consensus 339 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 399 (1133)
++|++|++++|+|+...+.+|..+++|++|++++|+++...|+.|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566677777777655555666666666666666666666666666666666666666654
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.65 E-value=5.8e-10 Score=127.27 Aligned_cols=128 Identities=34% Similarity=0.405 Sum_probs=93.4
Q ss_pred cccceeecccCccCCCCCccccCCCCccEEEecCCcccCCCccccccccccCeeecCCCcccCcCchh-hhccCCCcEEE
Q 001171 579 RSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKE-ISKCSSLVSLT 657 (1133)
Q Consensus 579 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~ 657 (1133)
..|...+.++|.+. .....+.-++.|+.|+|++|+++. .. .+..+++|+.|||++|++. .+|.. ...+. |+.|+
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~-v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTK-VD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhh-hH-HHHhcccccccccccchhc-cccccchhhhh-heeee
Confidence 34677778888877 455566667888888888888874 22 6777888888888888887 44432 33444 88888
Q ss_pred eecCCCCccCCccccCcccccccccccccccccCC-ccccccccCcccccccccccc
Q 001171 658 LDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGAIP-ADLALISSLRYLNLSRNNLEG 713 (1133)
Q Consensus 658 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~ 713 (1133)
+++|.++.. ..+.+|++|+.||||+|-|.+.-- .-++.|.+|+.|+|.||++.+
T Consensus 239 lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 239 LRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 998888743 456788889999999998875321 125667888899999999864
No 493
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.65 E-value=2.6e-09 Score=110.00 Aligned_cols=119 Identities=20% Similarity=0.217 Sum_probs=78.2
Q ss_pred cCcccchhhcccccCcEEEcccCcccC--CCCccccCCCCcceEeccCCcccC--cCCCccccccchhhhhhcccccCCC
Q 001171 83 LAGRLTDQLADLHELRKLSLHSNHLNG--SIPASLHQCSLLRAVYLQYNSFSG--HLPLSIFNLTNLLVLNVAHNLLSGK 158 (1133)
Q Consensus 83 l~g~~~~~l~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~L~~n~~~g--~~p~~l~~l~~L~~L~l~~N~l~~~ 158 (1133)
.+|..+-.++.+..++-|.|.+..|.. ..-..-..++.++.|||.+|+++. .|-..+.+||.|++||+++|.++..
T Consensus 33 ~~g~s~~~v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~ 112 (418)
T KOG2982|consen 33 SAGLSYLGVSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSD 112 (418)
T ss_pred ccccceeeeccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCc
Confidence 345555555566666677777766652 222122356788889999999884 4556678899999999999999866
Q ss_pred ccCc-cC-CcceEEEccCCcCCC-CCCCCCCCCCcCcEEeccCCcC
Q 001171 159 ISAD-IS-PSLRYLDLSSNAFTG-EIPGNFSSKSQLQLINLSYNSF 201 (1133)
Q Consensus 159 ~~~~-~~-~~l~~L~Ls~N~~~~-~~p~~~~~l~~L~~L~ls~N~l 201 (1133)
|... +| .+|+.|.|.+..+.- .....+..++.++.|++|.|++
T Consensus 113 I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~ 158 (418)
T KOG2982|consen 113 IKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSL 158 (418)
T ss_pred cccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchh
Confidence 6443 34 678888888777652 2334455666666666666633
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.59 E-value=4.4e-09 Score=96.23 Aligned_cols=136 Identities=29% Similarity=0.408 Sum_probs=105.4
Q ss_pred ccceeecccCccCCCCCcc---ccCCCCccEEEecCCcccCCCccccc-cccccCeeecCCCcccCcCchhhhccCCCcE
Q 001171 580 SLVFLSLSHNQISGMIPAE---LGACSALEVLELRSNHFTGNIPVDIS-HLSRIKKLDLGQNKLSGEIPKEISKCSSLVS 655 (1133)
Q Consensus 580 ~L~~L~Ls~N~l~~~~p~~---l~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 655 (1133)
.+..++|+.++|- .+++. +.....|+.++|++|.+.. .|..|. ..+.++.|+|++|+|+ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 3456677777664 33332 3445667778999999885 555544 4568999999999998 78999999999999
Q ss_pred EEeecCCCCccCCccccCcccccccccccccccccCCccccccccCcccccccccccccCCcccc
Q 001171 656 LTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNNLEGEIPKMLS 720 (1133)
Q Consensus 656 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~ 720 (1133)
|+++.|.+. ..|..+..|.+|..||.-+|.+. .+|-++..-+.....++..++|.+..|..++
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klq 167 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQ 167 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCccccc
Confidence 999999999 57788888999999999999987 6777765556667778888999998887644
No 495
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.58 E-value=1.7e-09 Score=109.97 Aligned_cols=213 Identities=24% Similarity=0.258 Sum_probs=106.1
Q ss_pred CCCCcCcEEeccCCcCCCCCccc----ccCccccceEecccccccCCCCc-cccCccccceeeccccccCCCCCCcccCc
Q 001171 186 SSKSQLQLINLSYNSFSGEVPAS----VGQLQELEYLWLDSNHLYGTLPS-AISNCSSLVHLSAEDNVLKGLIPGTIGRI 260 (1133)
Q Consensus 186 ~~l~~L~~L~ls~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~l~~N~l~~~~~~~~~~l 260 (1133)
-.+++|+..+||.|-|....|.. +..-+.|++|.|++|.+. .+.. -++ ..|.+| ..|+ ....-
T Consensus 89 lkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rig--kal~~l--a~nK-------Kaa~k 156 (388)
T COG5238 89 LKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIG--KALFHL--AYNK-------KAADK 156 (388)
T ss_pred hcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCC-ccchhHHH--HHHHHH--HHHh-------hhccC
Confidence 34556666666666665444432 334455555555555442 1111 011 111111 1111 12234
Q ss_pred CcccEEEcccCCccCCcccccccCcccccccccEEeccCCcccccccCCCCCccccccEEeccCCcccccCCchhhcccc
Q 001171 261 STLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTS 340 (1133)
Q Consensus 261 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~ 340 (1133)
+.|++.++..|++.. .|.......+.....|+.+.+.+|.|... .++.+.-..+..+.+
T Consensus 157 p~Le~vicgrNRlen-gs~~~~a~~l~sh~~lk~vki~qNgIrpe--------------------gv~~L~~~gl~y~~~ 215 (388)
T COG5238 157 PKLEVVICGRNRLEN-GSKELSAALLESHENLKEVKIQQNGIRPE--------------------GVTMLAFLGLFYSHS 215 (388)
T ss_pred CCceEEEeccchhcc-CcHHHHHHHHHhhcCceeEEeeecCcCcc--------------------hhHHHHHHHHHHhCc
Confidence 567777777777752 23333222223334455555555544311 000000113456778
Q ss_pred cceeeccCceeecc----cCcccCCCCCCcEEEccCCcccccCchhh------ccCCCccEEEccCCcccccCCCccCCC
Q 001171 341 LRVMDLSGNFFSGN----LPAAVGSLDKLEVLRVANNSLSGLVPDEI------AKCSLLQMFDLEGNRFSGQVPAFLGGI 410 (1133)
Q Consensus 341 L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~~~~~------~~l~~L~~L~Ls~N~l~~~~p~~l~~l 410 (1133)
|++|||.+|.++.. +...+..++.|+.|.+..|-++....+++ ...++|..|-..+|.+.+.+
T Consensus 216 LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~------- 288 (388)
T COG5238 216 LEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGI------- 288 (388)
T ss_pred ceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCce-------
Confidence 88888888887632 23445566778888888887775444333 13456777777777664322
Q ss_pred CCCcEEEccCCcCccccCccccCccccceeeccccccc
Q 001171 411 RGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIR 448 (1133)
Q Consensus 411 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~i~ 448 (1133)
+++.+.|.+. =.+++.|..|.+.+|+|.
T Consensus 289 ----i~~~~l~~~e------~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 289 ----ILDISLNEFE------QDAVPLLVDLERNGNRIK 316 (388)
T ss_pred ----eeeechhhhh------hcccHHHHHHHHccCcch
Confidence 1122222211 124566667777777765
No 496
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.54 E-value=1.5e-06 Score=94.42 Aligned_cols=265 Identities=14% Similarity=0.152 Sum_probs=154.7
Q ss_pred CcccccccccceeEEEEEECCceEEEEEEcccCCcCHHHHHHHHHHHhhc-cCCCeeeEEEEE----e--CCCCcEEEEE
Q 001171 840 DEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKV-KHRNLTVLRGYY----A--GPPDVRLLVY 912 (1133)
Q Consensus 840 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~----~--~~~~~~~lV~ 912 (1133)
..++.||+|+.+.+|-.--- +. .+.|+....... .+ .+-++.|... .||-+..-+.+= . ......-+.|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa-~~-aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPA-AQ-AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCCccccCCccceeeecchh-hc-hhheeecCCCch-HH-HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 35678999999999976211 11 233555433322 11 1223333333 566543311111 1 1122245777
Q ss_pred eccCCC-CHHHHHHh-hccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCccccccc
Q 001171 913 DYMPNG-NLATLLQE-ASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA 990 (1133)
Q Consensus 913 e~~~~g-sL~~~l~~-~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 990 (1133)
..+.+. -...++.. .+++.-...+|....+.++.+|.+.+.||..|.+-+|+.++|+|+.+++.+.+.|=..-.
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq---- 165 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ---- 165 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee----
Confidence 777654 22333322 112222347899999999999999999999999999999999999999999998743211
Q ss_pred CCCCCCCCCCCCCCCCccCccccC-----CCCCCCCCchhHHHHHHHHHHhC-CCCCccCC----hhhHHH-HHHHHhhh
Q 001171 991 TPAEASSSTTPIGSLGYVSPEAAS-----TGQPTKEADVYSFGIVLLEILTG-RKPVMFTQ----DEDIVK-WVKKQLQR 1059 (1133)
Q Consensus 991 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~el~tg-~~Pf~~~~----~~~~~~-~~~~~~~~ 1059 (1133)
.........+.+|...|.+||.-. +..-+...|-|.+|+++++++.| ++||.+.. ...-.+ .+ ..
T Consensus 166 i~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~I----a~ 241 (637)
T COG4248 166 INANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDI----AH 241 (637)
T ss_pred eccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhh----hc
Confidence 112334455678999999999753 34457788999999999999885 99996421 111111 11 11
Q ss_pred ccccccccCC-cCCCCCCChhHHHHHHhH-hhhhccCCCC--CCCCCCHHHHHHHHhcCcC
Q 001171 1060 GQISELLEPG-LLELDPESSEWEEFLLGV-KVGLLCTAPD--PLDRPSMADIVFMLEGCRV 1116 (1133)
Q Consensus 1060 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~li~~Cl~~d--P~~RPs~~evl~~Le~~~~ 1116 (1133)
+.+....+.. -....+....++.....+ .+-.+|+..- +.-||+++..+..|..+.+
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 1222221211 112222333333333333 3444565432 5689999998877766543
No 497
>PRK09902 hypothetical protein; Provisional
Probab=98.46 E-value=2.9e-06 Score=86.68 Aligned_cols=137 Identities=14% Similarity=0.156 Sum_probs=100.0
Q ss_pred cccccceeEEEEEECCceEEEEEEccc----C---CcCHHHHHHHHHHHhhccCCC--eeeEEEEEe---C-CCCcEEEE
Q 001171 845 LSRGRYGLIFKASYQDGMVLSIRRLRD----G---TIDENTFRKEAEALGKVKHRN--LTVLRGYYA---G-PPDVRLLV 911 (1133)
Q Consensus 845 lg~G~~g~Vy~~~~~~g~~vavK~~~~----~---~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~---~-~~~~~~lV 911 (1133)
-|+|+-+.|++.... |..+-+|+-.. . ......|.+|...++++..-+ +.+.. ++. . .....++|
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467888899998776 44688887641 1 224678999999999985322 33333 322 1 12234799
Q ss_pred EeccCC-CCHHHHHHhhccCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCc--eEEeccCccc
Q 001171 912 YDYMPN-GNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFE--AHLSEFGLDR 986 (1133)
Q Consensus 912 ~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~ 986 (1133)
+|-+++ -+|.+++..... ...+...+..+..+|++.++-||+.|+.|+|+.+.||+++.++. ++++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~~---~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV---SPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCc---CCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 998864 489888865322 23567778889999999999999999999999999999986667 8999998654
No 498
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.46 E-value=2.8e-09 Score=121.88 Aligned_cols=127 Identities=33% Similarity=0.321 Sum_probs=84.1
Q ss_pred CCcEeeccCCcccccCCCCCCCCccCcEEEcccccccCCCCcccccccccceeecccCccCCCCCccccCCCCccEEEec
Q 001171 532 SLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELR 611 (1133)
Q Consensus 532 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 611 (1133)
.|...+.++|++. .+..++.-++.|+.|||++|+++... .+..++.|++|||+.|++. .+|..=..-..|+.|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhhheeeeec
Confidence 4666777777776 45556666777888888888887432 6677788888888888887 444321112238888888
Q ss_pred CCcccCCCccccccccccCeeecCCCcccCcC-chhhhccCCCcEEEeecCCCC
Q 001171 612 SNHFTGNIPVDISHLSRIKKLDLGQNKLSGEI-PKEISKCSSLVSLTLDMNSLS 664 (1133)
Q Consensus 612 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~ 664 (1133)
+|.++. -..+.+|.+|+.|||++|.|.+.- -.-++.+..|+.|+|.+|.+-
T Consensus 241 nN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 887763 234677778888888888777531 122455666677777777664
No 499
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.44 E-value=1.7e-06 Score=96.81 Aligned_cols=171 Identities=21% Similarity=0.268 Sum_probs=123.9
Q ss_pred cceeEEEEEE-CCceEEEEEEcccCCc-CHHHHHHHHHHHhhccCCCeeeEEEEEeC---CCCcEEEEEeccCC-CCHHH
Q 001171 849 RYGLIFKASY-QDGMVLSIRRLRDGTI-DENTFRKEAEALGKVKHRNLTVLRGYYAG---PPDVRLLVYDYMPN-GNLAT 922 (1133)
Q Consensus 849 ~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~---~~~~~~lV~e~~~~-gsL~~ 922 (1133)
...+.|++.. .+|..|+.|++..... .......-+++++++.|+|+|++.+++.. ++...++||+|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3457899955 5799999999932221 11223456889999999999999998762 34456899999986 57776
Q ss_pred HHHhhc----------cCCCCCCChHHHHHHHHHHHHHHHHHhcCCceecccCccceeeCCCCceEEeccCcccccccCC
Q 001171 923 LLQEAS----------HQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATP 992 (1133)
Q Consensus 923 ~l~~~~----------~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 992 (1133)
..-... ...+...++...|.++.|+..||.++|+.|..-+-|.+.+|+++++.+++|+..|........+
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~ 447 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP 447 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence 543221 1123457788999999999999999999999999999999999999999998877654432221
Q ss_pred CCCCCCCCCCCCCCccCccccCCCCCCCCCchhHHHHHHHHHHhCCC
Q 001171 993 AEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRK 1039 (1133)
Q Consensus 993 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el~tg~~ 1039 (1133)
. |.+.+ -.+-|.-.+|.++..+.||..
T Consensus 448 ~-----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 448 T-----------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred C-----------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 0 11111 235688889999999998843
No 500
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.39 E-value=2.7e-06 Score=89.42 Aligned_cols=107 Identities=24% Similarity=0.330 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhhccCCC--eeeEEEEEeCC---CCcEEEEEeccCCC-CHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 001171 876 ENTFRKEAEALGKVKHRN--LTVLRGYYAGP---PDVRLLVYDYMPNG-NLATLLQEASHQDGHVLNWPMRHLISLGLAR 949 (1133)
Q Consensus 876 ~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~---~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~ 949 (1133)
.....+|...+.++.... +...+++.... ....++|+|++++. +|.+++..... .+...+..++.+++.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-----~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-----LDPSQRRELLRALAR 129 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-----cchhhHHHHHHHHHH
Confidence 456788999888885332 23444444432 22347999999874 79999876322 455667789999999
Q ss_pred HHHHHhcCCceecccCccceeeCCCC---ceEEeccCcccc
Q 001171 950 GLSFLHSLDMVHGDIKPQNVLFDADF---EAHLSEFGLDRL 987 (1133)
Q Consensus 950 ~L~~LH~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~ 987 (1133)
.++-||+.||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 130 ~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 130 LIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999999999999999998887 789999997643
Done!