Citrus Sinensis ID: 001171


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130---
MAATSTATAIFLFVTLTHFAYGEQNAVVLSEIQALTSFKLHLKDPLGALDGWDSSTPSAPCDWRGIVCYNNRVRELRLPRLQLAGRLTDQLADLHELRKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNNLEGEIPKMLSSRFNDPSIFAMNRELCGKPLDRECANVRKRKRKRLIILICVSAAGACLLALCCCGYIYSLLRWRQTLRAWATGEKKPSPSRGSSGAERGRGSGENGGPKLVMFNNKITYVETLEATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDMPSSADPTSLPSPM
cccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccccccccCEEcEEEccccEEEEEcccccccEEccccccccccccEEEcccccccccccccccccccccEEEccccccCCcccccccccccccEEEcccccccccccccccccccEEEccccccCCcccccccccccccEEEccccccCCcccccccccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccEEEccccccccccccccccccccccccccEEEcccccccccccccHHHccccccEEEcccccccccccHHHHccccccEEccccccccccccccccccccccEEEccccccCECccccccccccccEEEccccccCCcccHHHcccccccEEEccccCEEECccccccccccccEEEcccccccccccHHHHcccccccEEcccccccCCccccccccccccEEEccccCEEEcccHHHHccccccCEEcccccccccccccccccccccEEEcccccccccccccccccccccEEEccccCCcccccccccccccccEEccccccccccccHHHHccccccEEEcccccccccccHHHHccccccEEEcccccccccccHHHHccccccEEccccccccccccHHHHcccccccEEcccccccccccHHHHcccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccEEccccccEEEEEEEccccEEEEEEcccccccccHHHHHHHHHccccccccccEEEEECcccccEEEEEcccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEHHHHHHHHHcccccccccccccHHHHHHHHHHcccccEECccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccccccccccccccc
*****TATAIFLFVTLTHFAYGEQNAVVLSEIQALTSFKLHLKDPLGALDGWDSSTPSAPCDWRGIVCYNNRVRELRLPRLQLAGRLTDQLADLHELRKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNNLEGEIPKMLSSRFNDPSIFAMNRELCGKPLDRE**********RLIILICVSAAGACLLALCCCGYIYSLLRWRQTLRAWA***********************NGGPKLVMFNNKITYVETLEATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIA*********TPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCR******************
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MAATSTATAIFLFVTLTHFAYGEQNAVVLSEIQALTSFKLHLKDPLGALDGWDSSTPSAPCDWRGIVCYNNRVRELRLPRLQLAGRLTDQLADLHELRKLSLHSNHLNGSIPASLHQCSLLRAVYLQYNSFSGHLPLSIFNLTNLLVLNVAHNLLSGKISADISPSLRYLDLSSNAFTGEIPGNFSSKSQLQLINLSYNSFSGEVPASVGQLQELEYLWLDSNHLYGTLPSAISNCSSLVHLSAEDNVLKGLIPGTIGRISTLQVLSLSRNELTGLVPVSVLCNLWGNISSLRIVQLGFNAFTGVVKPPNGRCVSVLEVLDLQNNRIRAVFPSWLTNVTSLRVMDLSGNFFSGNLPAAVGSLDKLEVLRVANNSLSGLVPDEIAKCSLLQMFDLEGNRFSGQVPAFLGGIRGLKIVSLGRNMFSGLIPLSFGNLSQLETLNLSENDIRGNIPEEITRLSNLTTLNLSYNKFGGKVPYDVGNLKGLLVLNLSASGFSGKIPGSIGSLMRLTTLDLSNQNLSGELPIELFGLPSLQVVSLEENNLSGDVPEGFSSLVGLQYLNLSDNAFTGDIPATYGFLRSLVFLSLSHNQISGMIPAELGACSALEVLELRSNHFTGNIPVDISHLSRIKKLDLGQNKLSGEIPKEISKCSSLVSLTLDMNSLSGRIPESFSKLSNLTTLNLSTNRLSGAIPADLALISSLRYLNLSRNNLEGEIPKMLSSRFNDPSIFAMNRELCGKPLDRECANVRKRKRKRLIILICVSAAGACLLALCCCGYIYSLLRWRQTLRAWATGEKKPSPSRGSSGAERGRGSGENGGPKLVMFNNKITYVETLEATRQFDEENVLSRGRYGLIFKASYQDGMVLSIRRLRDGTIDENTFRKEAEALGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLISLGLARGLSFLHSLDMVHGDIKPQNVLFDADFEAHLSEFGLDRLAIATPAEASSSTTPIGSLGYVSPEAASTGQPTKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPSMADIVFMLEGCRVGPDMPSSADPTSLPSPM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2O6Q, chain A
Confidence level:very confident
Coverage over the Query: 59-145,168-304
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Template: 2O6Q, chain A
Confidence level:very confident
Coverage over the Query: 509-716
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Template: 2V9T, chain B
Confidence level:very confident
Coverage over the Query: 317-471
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Template: 2Z66, chain A
Confidence level:very confident
Coverage over the Query: 459-719
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Template: 2Z63, chain A
Confidence level:very confident
Coverage over the Query: 148-302,328-414,425-718
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Template: 4FCG, chain A
Confidence level:very confident
Coverage over the Query: 26-304
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Template: 3OJA, chain B
Confidence level:very confident
Coverage over the Query: 361-550,578-740
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Template: 3UIM, chain A
Confidence level:very confident
Coverage over the Query: 826-1118
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Template: 3RGZ, chain A
Confidence level:very confident
Coverage over the Query: 26-748
View the alignment between query and template
View the model in PyMOL